Query 010443
Match_columns 510
No_of_seqs 196 out of 1460
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 06:55:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010443.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010443hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3khd_A Pyruvate kinase; malari 100.0 3E-139 1E-143 1114.9 48.7 487 2-510 28-520 (520)
2 3gg8_A Pyruvate kinase; malari 100.0 3E-138 9E-143 1106.9 53.7 488 2-510 17-511 (511)
3 4drs_A Pyruvate kinase; glycol 100.0 1E-137 5E-142 1107.4 54.8 485 4-509 27-525 (526)
4 3gr4_A Pyruvate kinase isozyme 100.0 1E-136 3E-141 1101.5 54.4 478 17-510 59-550 (550)
5 3hqn_D Pyruvate kinase, PK; TI 100.0 9E-137 3E-141 1094.0 50.1 477 17-510 17-499 (499)
6 3t05_A Pyruvate kinase, PK; te 100.0 3E-133 1E-137 1088.6 50.5 474 13-510 15-494 (606)
7 1e0t_A Pyruvate kinase, PK; ph 100.0 3E-133 1E-137 1064.1 47.4 464 20-509 2-470 (470)
8 2e28_A Pyruvate kinase, PK; al 100.0 9E-130 3E-134 1064.3 53.6 467 19-509 2-474 (587)
9 3qtg_A Pyruvate kinase, PK; TI 100.0 2E-129 5E-134 1027.0 43.1 443 18-507 13-460 (461)
10 1a3w_A Pyruvate kinase; allost 100.0 3E-129 1E-133 1041.3 43.9 478 17-509 16-500 (500)
11 1izc_A Macrophomate synthase i 99.8 5.9E-19 2E-23 181.6 6.8 147 196-358 108-301 (339)
12 2vws_A YFAU, 2-keto-3-deoxy su 99.7 2E-18 6.8E-23 172.3 -2.4 126 195-335 80-240 (267)
13 2v5j_A 2,4-dihydroxyhept-2-ENE 99.7 5.9E-17 2E-21 163.3 6.5 127 194-335 100-261 (287)
14 3qz6_A HPCH/HPAI aldolase; str 99.6 2.9E-16 9.8E-21 156.3 8.7 126 196-335 79-239 (261)
15 1dxe_A 2-dehydro-3-deoxy-galac 99.6 5.4E-16 1.9E-20 153.8 10.4 126 195-335 81-240 (256)
16 1sgj_A Citrate lyase, beta sub 99.6 3.8E-15 1.3E-19 149.8 10.6 132 192-331 81-220 (284)
17 2xz9_A Phosphoenolpyruvate-pro 99.4 9.4E-13 3.2E-17 134.7 9.7 136 187-334 117-279 (324)
18 3qll_A Citrate lyase; beta bar 99.3 1.2E-11 4.2E-16 126.0 11.2 139 185-331 106-255 (316)
19 1u5h_A CITE; TIM barrel, struc 99.2 5.9E-11 2E-15 118.6 9.7 124 192-331 71-208 (273)
20 2ols_A Phosphoenolpyruvate syn 99.1 5.6E-11 1.9E-15 134.7 9.4 134 190-334 622-779 (794)
21 3qqw_A Putative citrate lyase; 99.1 1.2E-10 4.1E-15 119.5 8.7 120 205-331 110-254 (332)
22 2hwg_A Phosphoenolpyruvate-pro 99.1 3.8E-10 1.3E-14 123.3 10.9 135 188-334 367-528 (575)
23 2wqd_A Phosphoenolpyruvate-pro 99.0 3.1E-10 1.1E-14 123.9 9.3 133 189-333 370-529 (572)
24 3r4i_A Citrate lyase; TIM beta 99.0 3.4E-10 1.2E-14 116.5 8.8 120 205-331 109-253 (339)
25 3oyz_A Malate synthase; TIM ba 98.9 3.4E-09 1.2E-13 111.1 9.2 133 191-331 94-258 (433)
26 3cuz_A MSA, malate synthase A; 98.5 3E-06 1E-10 91.3 18.6 247 10-332 79-366 (532)
27 1vbg_A Pyruvate,orthophosphate 98.4 2.5E-07 8.6E-12 105.4 7.5 136 188-334 680-862 (876)
28 1kbl_A PPDK, pyruvate phosphat 98.3 7.1E-07 2.4E-11 101.7 7.4 136 188-334 673-856 (873)
29 3cux_A Malate synthase; TIM ba 98.3 3.2E-06 1.1E-10 91.0 11.3 243 11-332 77-364 (528)
30 1p7t_A MSG, malate synthase G; 97.8 3.5E-05 1.2E-09 84.7 7.5 133 194-332 371-536 (731)
31 1h6z_A Pyruvate phosphate diki 97.4 0.00071 2.4E-08 77.3 12.3 138 186-334 698-882 (913)
32 2x0s_A Pyruvate phosphate diki 96.7 0.0076 2.6E-07 69.3 12.2 115 209-334 727-882 (913)
33 3odm_A Pepcase, PEPC, phosphoe 95.0 0.041 1.4E-06 59.0 7.5 92 205-296 138-259 (560)
34 1jqo_A Phosphoenolpyruvate car 94.7 0.075 2.6E-06 61.0 9.3 106 207-312 529-653 (970)
35 1t57_A Conserved protein MTH16 94.4 0.92 3.1E-05 42.6 14.2 119 377-498 34-174 (206)
36 4af0_A Inosine-5'-monophosphat 94.3 0.4 1.4E-05 51.7 13.0 125 191-332 279-413 (556)
37 1ydn_A Hydroxymethylglutaryl-C 94.2 0.69 2.3E-05 45.8 14.0 156 189-354 22-196 (295)
38 1vp8_A Hypothetical protein AF 94.0 1.5 5.2E-05 41.0 14.8 119 377-498 26-167 (201)
39 1jqn_A Pepcase, PEPC, phosphoe 93.9 0.085 2.9E-06 60.1 7.5 93 205-297 467-578 (883)
40 4fo4_A Inosine 5'-monophosphat 93.7 0.77 2.6E-05 47.2 13.6 122 194-332 109-240 (366)
41 3f4w_A Putative hexulose 6 pho 93.5 0.14 4.9E-06 47.7 7.3 133 200-353 71-208 (211)
42 3ble_A Citramalate synthase fr 93.2 0.93 3.2E-05 45.9 13.2 160 189-355 37-211 (337)
43 3ffs_A Inosine-5-monophosphate 92.7 0.55 1.9E-05 49.0 10.8 118 196-332 147-275 (400)
44 3khj_A Inosine-5-monophosphate 92.5 1 3.4E-05 46.3 12.4 120 195-332 107-236 (361)
45 1ydo_A HMG-COA lyase; TIM-barr 92.4 2.7 9.3E-05 42.0 15.2 162 189-354 24-198 (307)
46 2ftp_A Hydroxymethylglutaryl-C 92.4 2.1 7.2E-05 42.5 14.3 160 189-354 26-200 (302)
47 3usb_A Inosine-5'-monophosphat 92.2 0.86 3E-05 48.9 12.0 125 192-332 255-388 (511)
48 4avf_A Inosine-5'-monophosphat 92.0 0.72 2.5E-05 49.2 10.9 121 192-332 228-361 (490)
49 4fxs_A Inosine-5'-monophosphat 91.5 1.5 5E-05 46.9 12.7 121 192-332 230-363 (496)
50 3ovp_A Ribulose-phosphate 3-ep 91.5 0.43 1.5E-05 45.8 7.8 135 200-355 81-220 (228)
51 2z6i_A Trans-2-enoyl-ACP reduc 91.4 1 3.5E-05 45.3 10.8 107 200-332 82-191 (332)
52 2cw6_A Hydroxymethylglutaryl-C 91.3 1.5 5E-05 43.6 11.7 162 189-355 23-198 (298)
53 1w8s_A FBP aldolase, fructose- 91.2 2.3 7.8E-05 41.5 12.8 69 200-270 166-238 (263)
54 3cu2_A Ribulose-5-phosphate 3- 90.9 1.1 3.8E-05 43.2 10.0 134 200-351 86-235 (237)
55 2qjg_A Putative aldolase MJ040 90.6 2.4 8.1E-05 41.0 12.2 46 35-80 102-149 (273)
56 1jcn_A Inosine monophosphate d 90.5 2.7 9.1E-05 44.9 13.5 120 194-333 256-388 (514)
57 3inp_A D-ribulose-phosphate 3- 90.3 1 3.5E-05 43.8 9.2 137 200-352 103-243 (246)
58 3bo9_A Putative nitroalkan dio 89.9 2.2 7.5E-05 42.8 11.7 109 200-332 96-205 (326)
59 1p1x_A Deoxyribose-phosphate a 89.8 2.1 7.1E-05 42.0 11.0 150 188-355 23-193 (260)
60 3r2g_A Inosine 5'-monophosphat 89.4 1.6 5.4E-05 44.9 10.2 116 192-332 99-228 (361)
61 3rmj_A 2-isopropylmalate synth 89.4 12 0.0004 38.4 16.9 159 189-355 30-199 (370)
62 3eeg_A 2-isopropylmalate synth 89.2 4.9 0.00017 40.5 13.6 159 189-355 24-193 (325)
63 3ctl_A D-allulose-6-phosphate 89.1 1.8 6.3E-05 41.4 9.9 137 200-353 74-218 (231)
64 1h1y_A D-ribulose-5-phosphate 89.1 1.8 6.3E-05 40.9 9.8 135 200-353 81-222 (228)
65 3ewb_X 2-isopropylmalate synth 88.7 13 0.00043 36.8 16.0 197 189-405 23-232 (293)
66 2fli_A Ribulose-phosphate 3-ep 88.0 1.9 6.7E-05 40.0 9.1 135 200-351 78-217 (220)
67 1tqj_A Ribulose-phosphate 3-ep 87.9 0.6 2.1E-05 44.7 5.5 134 200-350 79-219 (230)
68 1zco_A 2-dehydro-3-deoxyphosph 87.9 2.1 7E-05 42.0 9.5 122 200-345 44-179 (262)
69 1yad_A Regulatory protein TENI 87.5 5 0.00017 37.4 11.7 131 201-353 83-213 (221)
70 3bw2_A 2-nitropropane dioxygen 87.5 5.4 0.00018 40.6 12.8 109 200-332 116-237 (369)
71 1w8s_A FBP aldolase, fructose- 87.1 4.5 0.00015 39.4 11.4 128 191-332 39-179 (263)
72 1vcv_A Probable deoxyribose-ph 87.0 1.3 4.6E-05 42.4 7.4 147 188-356 12-182 (226)
73 1gte_A Dihydropyrimidine dehyd 86.2 3 0.0001 48.4 11.1 127 192-333 647-817 (1025)
74 2c6q_A GMP reductase 2; TIM ba 85.5 3.2 0.00011 42.3 9.7 119 194-333 119-253 (351)
75 4g9p_A 4-hydroxy-3-methylbut-2 85.5 2.9 0.0001 43.3 9.4 152 195-354 41-221 (406)
76 3ajx_A 3-hexulose-6-phosphate 85.4 2.2 7.7E-05 39.3 7.9 131 200-350 71-204 (207)
77 4e38_A Keto-hydroxyglutarate-a 84.9 4.1 0.00014 39.2 9.6 37 281-331 117-153 (232)
78 2gjl_A Hypothetical protein PA 84.7 4.7 0.00016 40.2 10.5 107 200-332 90-201 (328)
79 1n7k_A Deoxyribose-phosphate a 84.6 2.6 8.8E-05 40.7 8.1 142 188-353 31-192 (234)
80 1vs1_A 3-deoxy-7-phosphoheptul 84.5 6.1 0.00021 38.9 10.9 106 218-347 88-196 (276)
81 1y0e_A Putative N-acetylmannos 83.9 3.9 0.00014 38.0 9.0 131 196-350 79-219 (223)
82 1mxs_A KDPG aldolase; 2-keto-3 83.2 9 0.00031 36.4 11.2 109 191-331 36-145 (225)
83 1eep_A Inosine 5'-monophosphat 83.0 4.7 0.00016 41.6 9.9 120 194-332 154-285 (404)
84 1rpx_A Protein (ribulose-phosp 82.9 5.2 0.00018 37.6 9.4 134 200-350 85-225 (230)
85 3igs_A N-acetylmannosamine-6-p 82.8 5.6 0.00019 38.0 9.6 133 196-354 92-229 (232)
86 1ub3_A Aldolase protein; schif 82.5 2.9 9.8E-05 39.9 7.4 145 188-352 14-173 (220)
87 1ypf_A GMP reductase; GUAC, pu 82.4 3.6 0.00012 41.4 8.5 117 192-332 105-239 (336)
88 2yw3_A 4-hydroxy-2-oxoglutarat 82.2 6.3 0.00022 36.8 9.6 105 193-331 25-130 (207)
89 3nvt_A 3-deoxy-D-arabino-heptu 81.7 5.7 0.0002 41.0 9.8 109 200-332 163-283 (385)
90 1wbh_A KHG/KDPG aldolase; lyas 81.7 6.6 0.00023 37.0 9.6 109 191-331 26-135 (214)
91 3ivs_A Homocitrate synthase, m 81.1 38 0.0013 35.3 15.9 155 189-354 57-221 (423)
92 1xi3_A Thiamine phosphate pyro 80.9 8.5 0.00029 35.2 9.9 124 202-353 82-211 (215)
93 1vhc_A Putative KHG/KDPG aldol 80.9 8.6 0.00029 36.5 10.1 109 191-331 27-136 (224)
94 1f76_A Dihydroorotate dehydrog 80.8 9.5 0.00033 38.0 11.0 119 200-332 160-318 (336)
95 1vrd_A Inosine-5'-monophosphat 80.4 13 0.00043 39.3 12.3 119 194-332 238-369 (494)
96 3oa3_A Aldolase; structural ge 80.0 5.2 0.00018 39.7 8.4 145 188-354 69-230 (288)
97 1tqx_A D-ribulose-5-phosphate 79.9 3.7 0.00013 39.3 7.2 129 207-353 86-222 (227)
98 1nvm_A HOA, 4-hydroxy-2-oxoval 79.0 22 0.00074 35.8 13.0 151 189-355 26-191 (345)
99 3qja_A IGPS, indole-3-glycerol 78.8 14 0.00048 36.1 11.1 128 200-350 129-260 (272)
100 1jub_A Dihydroorotate dehydrog 78.6 14 0.00048 36.2 11.3 128 191-332 104-271 (311)
101 3jr2_A Hexulose-6-phosphate sy 78.2 1.6 5.5E-05 41.0 4.0 132 200-353 77-214 (218)
102 1mzh_A Deoxyribose-phosphate a 77.7 12 0.00041 35.4 10.0 145 188-350 15-170 (225)
103 1vzw_A Phosphoribosyl isomeras 77.6 2.1 7.3E-05 40.6 4.7 127 194-340 33-174 (244)
104 2qjg_A Putative aldolase MJ040 77.3 24 0.00083 33.7 12.3 130 200-354 106-259 (273)
105 1geq_A Tryptophan synthase alp 76.2 16 0.00054 34.5 10.5 118 197-332 100-220 (248)
106 3r12_A Deoxyribose-phosphate a 75.9 9.9 0.00034 37.1 9.0 148 188-352 54-213 (260)
107 1me8_A Inosine-5'-monophosphat 75.7 16 0.00054 38.8 11.4 114 200-332 248-381 (503)
108 2qr6_A IMP dehydrogenase/GMP r 75.5 17 0.00057 37.2 11.1 112 202-333 174-307 (393)
109 1zfj_A Inosine monophosphate d 75.4 25 0.00085 36.9 12.8 121 193-332 233-365 (491)
110 3ngj_A Deoxyribose-phosphate a 75.4 10 0.00035 36.6 8.9 149 188-352 38-197 (239)
111 3q58_A N-acetylmannosamine-6-p 74.9 14 0.00049 35.0 9.7 130 196-350 92-225 (229)
112 3vnd_A TSA, tryptophan synthas 74.5 7.7 0.00026 38.0 7.9 115 200-332 117-235 (267)
113 4fxs_A Inosine-5'-monophosphat 74.3 6.5 0.00022 41.9 7.8 52 20-71 218-269 (496)
114 3nav_A Tryptophan synthase alp 72.5 9.6 0.00033 37.4 8.0 115 200-332 119-237 (271)
115 2ztj_A Homocitrate synthase; ( 71.9 91 0.0031 31.7 16.8 155 189-354 21-185 (382)
116 1h1y_A D-ribulose-5-phosphate 71.8 27 0.00094 32.6 10.9 130 196-352 23-168 (228)
117 3q58_A N-acetylmannosamine-6-p 71.5 29 0.00098 32.9 11.0 113 190-331 33-155 (229)
118 2tps_A Protein (thiamin phosph 70.6 29 0.00098 32.0 10.7 123 202-353 90-221 (227)
119 1wa3_A 2-keto-3-deoxy-6-phosph 70.5 22 0.00075 32.4 9.7 108 191-332 20-131 (205)
120 3qja_A IGPS, indole-3-glycerol 70.4 14 0.00049 36.1 8.7 109 194-333 73-190 (272)
121 1thf_D HISF protein; thermophI 70.1 12 0.0004 35.4 7.9 133 196-348 87-241 (253)
122 2v82_A 2-dehydro-3-deoxy-6-pho 70.0 25 0.00086 32.2 10.0 126 197-355 72-203 (212)
123 3kws_A Putative sugar isomeras 69.9 45 0.0015 31.6 12.2 127 194-322 39-188 (287)
124 3igs_A N-acetylmannosamine-6-p 69.7 41 0.0014 31.8 11.6 113 190-331 33-155 (232)
125 3lab_A Putative KDPG (2-keto-3 69.7 27 0.00092 33.1 10.2 38 281-332 96-139 (217)
126 1ep3_A Dihydroorotate dehydrog 69.7 20 0.00069 34.8 9.8 127 192-334 110-272 (311)
127 1ka9_F Imidazole glycerol phos 69.0 24 0.00084 33.1 9.9 132 197-348 89-242 (252)
128 3s5o_A 4-hydroxy-2-oxoglutarat 68.4 26 0.00089 34.7 10.3 95 200-297 42-148 (307)
129 3t05_A Pyruvate kinase, PK; te 67.8 70 0.0024 34.9 14.2 154 122-290 140-358 (606)
130 3daq_A DHDPS, dihydrodipicolin 67.6 22 0.00075 34.9 9.5 96 198-297 28-134 (292)
131 1jcn_A Inosine monophosphate d 67.4 8.4 0.00029 40.9 6.9 52 20-71 242-293 (514)
132 3fkr_A L-2-keto-3-deoxyarabona 67.2 15 0.00051 36.5 8.2 97 198-297 34-143 (309)
133 3o63_A Probable thiamine-phosp 67.1 22 0.00075 34.1 9.1 122 202-354 108-241 (243)
134 3tha_A Tryptophan synthase alp 66.8 20 0.0007 34.7 8.9 114 200-332 110-227 (252)
135 2cu0_A Inosine-5'-monophosphat 66.2 49 0.0017 34.7 12.5 119 195-333 230-358 (486)
136 1vr6_A Phospho-2-dehydro-3-deo 65.6 55 0.0019 33.2 12.2 90 218-331 156-246 (350)
137 3b4u_A Dihydrodipicolinate syn 65.3 34 0.0012 33.5 10.4 98 197-297 28-139 (294)
138 1q6o_A Humps, 3-keto-L-gulonat 65.2 11 0.00037 35.1 6.4 134 202-353 76-212 (216)
139 3ndo_A Deoxyribose-phosphate a 65.1 23 0.0008 33.9 8.8 146 188-352 24-187 (231)
140 2wqp_A Polysialic acid capsule 64.8 28 0.00097 35.3 9.8 99 217-342 89-188 (349)
141 3tsm_A IGPS, indole-3-glycerol 64.0 51 0.0018 32.1 11.3 130 197-349 134-266 (272)
142 4fo4_A Inosine 5'-monophosphat 63.9 11 0.00038 38.5 6.7 48 23-70 98-145 (366)
143 1rpx_A Protein (ribulose-phosp 63.6 49 0.0017 30.7 10.8 112 195-332 26-147 (230)
144 3glc_A Aldolase LSRF; TIM barr 63.5 10 0.00036 37.6 6.2 154 246-423 71-229 (295)
145 3qze_A DHDPS, dihydrodipicolin 63.3 20 0.00068 35.7 8.3 94 200-297 51-155 (314)
146 3w01_A Heptaprenylglyceryl pho 63.2 71 0.0024 30.6 11.8 160 247-446 26-204 (235)
147 3gr4_A Pyruvate kinase isozyme 63.0 53 0.0018 35.4 11.9 233 122-423 191-494 (550)
148 3g8r_A Probable spore coat pol 62.9 60 0.002 33.0 11.8 95 219-341 78-174 (350)
149 2ekc_A AQ_1548, tryptophan syn 62.7 25 0.00086 33.8 8.7 115 200-332 116-234 (262)
150 2a4a_A Deoxyribose-phosphate a 62.5 43 0.0015 33.0 10.3 150 188-355 43-215 (281)
151 2czd_A Orotidine 5'-phosphate 62.3 31 0.0011 31.8 9.0 124 200-352 72-205 (208)
152 2nv1_A Pyridoxal biosynthesis 62.1 42 0.0014 32.9 10.4 121 200-351 35-170 (305)
153 3usb_A Inosine-5'-monophosphat 61.9 10 0.00035 40.5 6.2 52 19-70 242-293 (511)
154 3m5v_A DHDPS, dihydrodipicolin 60.7 25 0.00084 34.7 8.4 94 200-297 35-140 (301)
155 1yxy_A Putative N-acetylmannos 60.7 25 0.00086 32.7 8.1 127 196-351 92-231 (234)
156 2h6r_A Triosephosphate isomera 60.6 12 0.00041 35.2 5.8 128 202-348 78-215 (219)
157 1at0_A 17-hedgehog; developmen 60.4 19 0.00065 31.6 6.7 48 101-155 58-116 (145)
158 2y88_A Phosphoribosyl isomeras 60.3 3.8 0.00013 38.6 2.3 66 194-267 32-107 (244)
159 3khj_A Inosine-5-monophosphate 60.0 11 0.00039 38.3 5.9 45 24-70 98-142 (361)
160 1aj0_A DHPS, dihydropteroate s 59.8 24 0.00083 34.7 8.1 70 20-91 13-103 (282)
161 3cqj_A L-ribulose-5-phosphate 59.5 37 0.0013 32.3 9.3 35 200-234 37-81 (295)
162 3l21_A DHDPS, dihydrodipicolin 59.4 21 0.0007 35.4 7.6 96 198-297 41-147 (304)
163 1h5y_A HISF; histidine biosynt 58.5 23 0.0008 32.8 7.5 128 200-348 93-244 (253)
164 3pc3_A CG1753, isoform A; CBS, 58.4 37 0.0013 36.0 9.9 122 282-423 127-254 (527)
165 3zwt_A Dihydroorotate dehydrog 58.1 41 0.0014 34.2 9.7 117 205-333 175-328 (367)
166 3dwg_A Cysteine synthase B; su 58.0 44 0.0015 33.1 9.8 120 281-423 86-210 (325)
167 4avf_A Inosine-5'-monophosphat 58.0 16 0.00054 38.8 6.8 52 20-71 216-267 (490)
168 1f6k_A N-acetylneuraminate lya 58.0 56 0.0019 31.9 10.5 97 197-297 28-136 (293)
169 1xky_A Dihydrodipicolinate syn 57.9 38 0.0013 33.4 9.2 97 197-297 37-144 (301)
170 1qop_A Tryptophan synthase alp 57.8 27 0.00094 33.6 8.0 115 200-332 116-234 (268)
171 3m47_A Orotidine 5'-phosphate 57.7 20 0.00068 34.0 6.8 127 201-353 86-223 (228)
172 1eep_A Inosine 5'-monophosphat 57.6 12 0.0004 38.5 5.6 51 21-71 141-191 (404)
173 3si9_A DHDPS, dihydrodipicolin 56.4 26 0.00089 34.9 7.7 97 197-297 47-154 (315)
174 3gg8_A Pyruvate kinase; malari 56.3 1.4E+02 0.0049 31.8 13.7 150 122-288 156-371 (511)
175 1vrd_A Inosine-5'-monophosphat 56.1 14 0.00049 38.8 6.1 51 21-71 225-275 (494)
176 2wkj_A N-acetylneuraminate lya 56.1 44 0.0015 32.9 9.3 97 197-297 36-144 (303)
177 3khd_A Pyruvate kinase; malari 56.1 71 0.0024 34.2 11.4 217 143-422 181-468 (520)
178 3ndz_A Endoglucanase D; cellot 55.8 23 0.0008 35.3 7.4 58 29-88 39-106 (345)
179 2v9d_A YAGE; dihydrodipicolini 55.5 27 0.00092 35.2 7.8 97 197-297 56-163 (343)
180 1rd5_A Tryptophan synthase alp 55.5 1.3E+02 0.0043 28.5 12.3 142 192-354 32-199 (262)
181 1tvn_A Cellulase, endoglucanas 55.2 23 0.00079 34.1 7.0 54 32-87 38-101 (293)
182 3e96_A Dihydrodipicolinate syn 54.8 37 0.0013 33.7 8.5 94 200-297 40-143 (316)
183 3l6b_A Serine racemase; pyrido 54.6 1.2E+02 0.0042 30.0 12.6 115 282-423 90-209 (346)
184 2ehh_A DHDPS, dihydrodipicolin 54.4 47 0.0016 32.5 9.2 96 198-297 26-132 (294)
185 2gdq_A YITF; mandelate racemas 54.4 41 0.0014 34.1 9.0 63 21-86 123-192 (382)
186 4dwd_A Mandelate racemase/muco 54.4 46 0.0016 34.0 9.5 76 4-86 112-199 (393)
187 2yxg_A DHDPS, dihydrodipicolin 54.2 43 0.0015 32.6 8.9 97 197-297 25-132 (289)
188 1kbi_A Cytochrome B2, L-LCR; f 54.0 55 0.0019 34.8 10.3 96 217-333 331-433 (511)
189 1ve1_A O-acetylserine sulfhydr 53.9 68 0.0023 31.1 10.3 115 282-423 76-199 (304)
190 3tbh_A O-acetyl serine sulfhyd 53.6 50 0.0017 32.8 9.4 120 281-423 85-210 (334)
191 2y88_A Phosphoribosyl isomeras 53.2 24 0.00081 33.0 6.6 114 197-333 88-226 (244)
192 3flu_A DHDPS, dihydrodipicolin 53.2 44 0.0015 32.7 8.8 94 200-297 35-139 (297)
193 3hqn_D Pyruvate kinase, PK; TI 53.2 87 0.003 33.3 11.5 233 121-422 139-443 (499)
194 1vzw_A Phosphoribosyl isomeras 52.6 31 0.0011 32.3 7.3 129 196-347 88-238 (244)
195 3hgm_A Universal stress protei 52.5 20 0.0007 29.9 5.5 42 381-423 97-147 (147)
196 3exr_A RMPD (hexulose-6-phosph 52.5 96 0.0033 28.9 10.7 133 202-353 78-217 (221)
197 3glc_A Aldolase LSRF; TIM barr 52.5 77 0.0026 31.3 10.4 129 200-354 132-279 (295)
198 1j0a_A 1-aminocyclopropane-1-c 52.2 37 0.0013 33.4 8.1 123 281-423 85-214 (325)
199 2e6f_A Dihydroorotate dehydrog 51.8 23 0.00079 34.7 6.5 129 192-333 105-274 (314)
200 3tak_A DHDPS, dihydrodipicolin 51.7 53 0.0018 32.0 9.1 94 200-297 29-133 (291)
201 3i65_A Dihydroorotate dehydrog 51.7 22 0.00074 37.0 6.4 99 188-293 278-402 (415)
202 3cpr_A Dihydrodipicolinate syn 51.6 66 0.0023 31.6 9.8 97 197-297 41-148 (304)
203 3qfe_A Putative dihydrodipicol 51.6 48 0.0016 32.9 8.8 95 200-297 39-145 (318)
204 2rfg_A Dihydrodipicolinate syn 51.5 41 0.0014 33.0 8.2 94 200-297 28-132 (297)
205 2w6r_A Imidazole glycerol phos 51.3 49 0.0017 31.2 8.6 126 197-341 88-238 (266)
206 2z08_A Universal stress protei 51.2 32 0.0011 28.5 6.5 41 382-423 87-136 (137)
207 1egz_A Endoglucanase Z, EGZ, C 51.1 22 0.00076 34.1 6.1 52 33-86 39-98 (291)
208 3ngf_A AP endonuclease, family 50.9 88 0.003 29.2 10.3 103 192-296 22-149 (269)
209 1wv2_A Thiazole moeity, thiazo 50.9 1.8E+02 0.0063 28.2 14.9 80 257-352 157-236 (265)
210 2ovl_A Putative racemase; stru 50.9 50 0.0017 33.2 9.0 73 5-85 122-198 (371)
211 2gn0_A Threonine dehydratase c 50.9 1.5E+02 0.0052 29.2 12.5 115 282-423 102-221 (342)
212 1ujp_A Tryptophan synthase alp 50.7 25 0.00087 34.2 6.4 113 200-332 113-229 (271)
213 2r8w_A AGR_C_1641P; APC7498, d 50.5 53 0.0018 32.9 9.0 99 195-297 57-166 (332)
214 3dz1_A Dihydrodipicolinate syn 50.4 69 0.0024 31.6 9.7 95 197-297 33-140 (313)
215 1p5j_A L-serine dehydratase; l 50.3 1.3E+02 0.0044 30.3 12.0 116 282-423 107-229 (372)
216 1y0e_A Putative N-acetylmannos 50.1 1.5E+02 0.0051 26.9 14.5 114 191-332 21-146 (223)
217 2vc6_A MOSA, dihydrodipicolina 50.0 49 0.0017 32.3 8.5 94 200-297 28-132 (292)
218 1ub3_A Aldolase protein; schif 49.9 76 0.0026 29.9 9.5 118 291-423 52-182 (220)
219 4af0_A Inosine-5'-monophosphat 49.8 16 0.00055 39.4 5.1 52 19-70 267-318 (556)
220 3na8_A Putative dihydrodipicol 49.7 39 0.0013 33.5 7.8 94 200-297 52-156 (315)
221 3m5v_A DHDPS, dihydrodipicolin 49.5 92 0.0031 30.5 10.4 91 257-357 42-135 (301)
222 2k8i_A SLYD, peptidyl-prolyl C 49.4 55 0.0019 29.6 8.1 59 102-162 51-117 (171)
223 2e28_A Pyruvate kinase, PK; al 49.4 2E+02 0.0068 31.2 13.8 151 122-289 120-338 (587)
224 4aec_A Cysteine synthase, mito 49.3 63 0.0022 33.6 9.6 119 282-423 189-313 (430)
225 3icg_A Endoglucanase D; cellul 49.3 30 0.001 36.6 7.3 55 32-88 45-109 (515)
226 3dx5_A Uncharacterized protein 49.2 1.1E+02 0.0039 28.5 10.9 37 200-236 22-65 (286)
227 1z7w_A Cysteine synthase; tran 49.2 84 0.0029 30.8 10.2 119 282-423 81-205 (322)
228 3stp_A Galactonate dehydratase 48.9 23 0.0008 36.5 6.2 78 4-86 154-238 (412)
229 2pqm_A Cysteine synthase; OASS 48.9 40 0.0014 33.6 7.8 119 282-423 92-216 (343)
230 4eiv_A Deoxyribose-phosphate a 48.2 58 0.002 32.3 8.5 155 188-355 37-209 (297)
231 3ks6_A Glycerophosphoryl diest 48.2 44 0.0015 31.7 7.6 105 208-351 134-244 (250)
232 1o5k_A DHDPS, dihydrodipicolin 47.9 54 0.0018 32.3 8.4 97 197-297 37-144 (306)
233 3vnd_A TSA, tryptophan synthas 47.8 66 0.0023 31.2 8.9 90 195-295 35-152 (267)
234 1mjh_A Protein (ATP-binding do 47.7 37 0.0013 28.9 6.5 42 381-423 107-157 (162)
235 2egu_A Cysteine synthase; O-ac 47.7 65 0.0022 31.3 9.0 118 282-423 79-202 (308)
236 4h27_A L-serine dehydratase/L- 47.6 68 0.0023 32.2 9.4 116 282-423 107-229 (364)
237 3i65_A Dihydroorotate dehydrog 47.3 97 0.0033 32.1 10.5 87 234-332 268-374 (415)
238 1jbq_A B, cystathionine beta-s 47.2 59 0.002 33.8 9.0 122 282-423 175-302 (435)
239 2bdq_A Copper homeostasis prot 47.2 83 0.0028 29.9 9.2 115 287-423 50-184 (224)
240 3nbm_A PTS system, lactose-spe 47.1 8.6 0.00029 32.4 2.1 62 220-296 22-83 (108)
241 1mdl_A Mandelate racemase; iso 47.0 39 0.0013 33.8 7.4 71 5-85 122-196 (359)
242 1xm3_A Thiazole biosynthesis p 46.8 1.2E+02 0.004 29.1 10.6 91 250-356 140-231 (264)
243 2htm_A Thiazole biosynthesis p 46.5 1.4E+02 0.0048 29.1 10.8 81 257-352 146-227 (268)
244 3noy_A 4-hydroxy-3-methylbut-2 46.3 1.7E+02 0.0059 29.7 11.8 140 195-354 49-202 (366)
245 3sz8_A 2-dehydro-3-deoxyphosph 46.3 54 0.0019 32.3 8.0 111 202-336 47-172 (285)
246 3oix_A Putative dihydroorotate 46.2 94 0.0032 31.3 10.1 150 191-358 139-325 (345)
247 3tnj_A Universal stress protei 46.0 31 0.0011 29.0 5.6 41 382-423 97-145 (150)
248 1yad_A Regulatory protein TENI 46.0 1.5E+02 0.0052 27.0 10.9 108 191-333 28-138 (221)
249 3l55_A B-1,4-endoglucanase/cel 46.0 29 0.001 35.0 6.3 57 29-87 49-113 (353)
250 1tv5_A Dhodehase, dihydroorota 45.9 35 0.0012 35.8 6.9 99 188-293 306-430 (443)
251 2nx9_A Oxaloacetate decarboxyl 45.6 1.4E+02 0.0047 31.4 11.5 186 189-404 26-235 (464)
252 1yxy_A Putative N-acetylmannos 45.5 93 0.0032 28.7 9.4 111 194-333 37-163 (234)
253 1ko7_A HPR kinase/phosphatase; 45.3 21 0.00073 35.7 5.0 85 234-339 49-157 (314)
254 3d0c_A Dihydrodipicolinate syn 45.3 48 0.0016 32.8 7.6 97 197-297 37-143 (314)
255 2nuw_A 2-keto-3-deoxygluconate 45.3 1.3E+02 0.0044 29.2 10.7 98 195-297 22-129 (288)
256 1tdj_A Biosynthetic threonine 44.9 2.1E+02 0.0073 30.4 13.0 147 235-423 46-212 (514)
257 3fs2_A 2-dehydro-3-deoxyphosph 44.8 77 0.0026 31.4 8.9 110 202-335 68-192 (298)
258 3sgz_A Hydroxyacid oxidase 2; 44.8 1.1E+02 0.0036 31.1 10.2 167 279-458 87-301 (352)
259 2qdd_A Mandelate racemase/muco 44.8 63 0.0022 32.5 8.6 71 6-85 123-197 (378)
260 2xio_A Putative deoxyribonucle 44.6 42 0.0014 32.5 7.0 103 194-298 28-147 (301)
261 1edg_A Endoglucanase A; family 44.4 40 0.0014 33.8 7.0 57 30-88 59-124 (380)
262 1vli_A Spore coat polysacchari 44.4 50 0.0017 34.0 7.7 55 257-331 135-191 (385)
263 3h5d_A DHDPS, dihydrodipicolin 43.8 65 0.0022 31.8 8.3 94 200-297 35-140 (311)
264 1oy0_A Ketopantoate hydroxymet 43.8 2.4E+02 0.0083 27.6 14.3 33 390-423 188-220 (281)
265 4ef8_A Dihydroorotate dehydrog 43.7 54 0.0019 33.2 7.8 116 204-332 153-306 (354)
266 3sjn_A Mandelate racemase/muco 43.6 62 0.0021 32.7 8.3 76 4-86 121-201 (374)
267 2v82_A 2-dehydro-3-deoxy-6-pho 43.5 73 0.0025 28.9 8.2 65 200-269 115-182 (212)
268 2kfw_A FKBP-type peptidyl-prol 43.4 29 0.001 32.2 5.3 77 101-182 50-134 (196)
269 1y7l_A O-acetylserine sulfhydr 43.3 1.2E+02 0.0042 29.4 10.3 117 282-423 76-202 (316)
270 2d73_A Alpha-glucosidase SUSB; 42.4 86 0.0029 35.0 9.6 102 191-296 370-506 (738)
271 3tsm_A IGPS, indole-3-glycerol 42.0 1.6E+02 0.0054 28.6 10.6 105 197-332 83-196 (272)
272 2rkb_A Serine dehydratase-like 41.8 1.7E+02 0.0057 28.5 11.0 114 283-423 69-189 (318)
273 2zbt_A Pyridoxal biosynthesis 41.8 25 0.00087 34.2 4.9 39 316-354 222-260 (297)
274 3s3t_A Nucleotide-binding prot 41.7 46 0.0016 27.6 6.0 42 381-423 94-145 (146)
275 2dum_A Hypothetical protein PH 41.5 52 0.0018 28.3 6.5 42 381-423 104-154 (170)
276 2nli_A Lactate oxidase; flavoe 41.2 68 0.0023 32.5 8.2 96 216-333 216-314 (368)
277 1gox_A (S)-2-hydroxy-acid oxid 41.2 1.4E+02 0.0048 30.0 10.6 60 278-337 88-161 (370)
278 3lmz_A Putative sugar isomeras 41.2 95 0.0032 28.8 8.7 41 194-234 31-76 (257)
279 3fdx_A Putative filament prote 41.1 51 0.0017 27.2 6.2 42 381-423 93-142 (143)
280 1tq8_A Hypothetical protein RV 40.9 46 0.0016 28.9 6.1 41 382-423 107-156 (163)
281 3ayr_A Endoglucanase; TIM barr 40.9 54 0.0018 32.9 7.3 54 32-87 62-125 (376)
282 2oz8_A MLL7089 protein; struct 40.9 64 0.0022 32.7 7.9 62 21-85 132-197 (389)
283 3flu_A DHDPS, dihydrodipicolin 40.6 2E+02 0.0069 27.9 11.3 90 257-357 42-134 (297)
284 1p0k_A Isopentenyl-diphosphate 40.5 94 0.0032 30.8 9.1 31 291-333 251-281 (349)
285 1rvk_A Isomerase/lactonizing e 40.4 57 0.002 32.8 7.5 47 36-85 155-207 (382)
286 2ojp_A DHDPS, dihydrodipicolin 40.3 41 0.0014 32.8 6.2 97 197-297 26-133 (292)
287 3qtg_A Pyruvate kinase, PK; TI 40.3 1.5E+02 0.0051 31.2 10.6 96 122-229 130-245 (461)
288 2v03_A Cysteine synthase B; py 40.3 1.3E+02 0.0046 29.0 10.0 118 282-423 75-198 (303)
289 1w3i_A EDA, 2-keto-3-deoxy glu 40.2 1.4E+02 0.0049 28.9 10.1 96 197-297 24-129 (293)
290 3tml_A 2-dehydro-3-deoxyphosph 40.2 64 0.0022 31.8 7.5 112 201-336 43-175 (288)
291 3eb2_A Putative dihydrodipicol 40.2 41 0.0014 33.0 6.2 96 198-297 30-136 (300)
292 3m9b_A Proteasome-associated A 39.6 89 0.003 30.2 8.1 27 85-111 117-143 (251)
293 1tx2_A DHPS, dihydropteroate s 39.6 82 0.0028 31.1 8.2 70 20-91 38-128 (297)
294 3qze_A DHDPS, dihydrodipicolin 39.6 1.9E+02 0.0065 28.4 11.0 90 257-357 58-150 (314)
295 2r91_A 2-keto-3-deoxy-(6-phosp 39.2 1.3E+02 0.0045 29.0 9.7 93 200-297 26-128 (286)
296 1h1n_A Endo type cellulase ENG 39.2 39 0.0013 32.8 5.8 53 34-88 33-95 (305)
297 3eod_A Protein HNR; response r 39.1 81 0.0028 25.1 7.1 64 385-460 42-110 (130)
298 3sgz_A Hydroxyacid oxidase 2; 39.0 89 0.0031 31.6 8.5 31 291-333 272-302 (352)
299 1o66_A 3-methyl-2-oxobutanoate 39.0 1.8E+02 0.0061 28.4 10.4 131 190-333 22-182 (275)
300 3b0p_A TRNA-dihydrouridine syn 38.9 69 0.0024 32.1 7.7 125 193-332 70-225 (350)
301 3rcm_A TATD family hydrolase; 38.9 84 0.0029 30.6 8.2 104 193-299 17-135 (287)
302 2cks_A Endoglucanase E-5; carb 38.6 55 0.0019 31.7 6.8 53 33-87 43-102 (306)
303 2q3b_A Cysteine synthase A; py 38.4 2.1E+02 0.0072 27.6 11.1 114 283-423 82-205 (313)
304 2gjl_A Hypothetical protein PA 38.3 2.6E+02 0.0089 27.2 11.8 109 200-335 33-148 (328)
305 3bo9_A Putative nitroalkan dio 38.2 3E+02 0.01 27.0 14.3 106 200-333 44-152 (326)
306 2nzl_A Hydroxyacid oxidase 1; 38.2 48 0.0017 34.0 6.5 95 217-333 240-337 (392)
307 1vyr_A Pentaerythritol tetrani 38.0 2.5E+02 0.0087 28.1 11.9 111 200-332 168-323 (364)
308 3tj4_A Mandelate racemase; eno 38.0 1.2E+02 0.0041 30.4 9.5 75 4-85 124-204 (372)
309 2q02_A Putative cytoplasmic pr 37.6 2.3E+02 0.0078 26.0 10.9 34 200-233 26-65 (272)
310 2hmc_A AGR_L_411P, dihydrodipi 37.6 1.1E+02 0.0038 30.7 9.0 97 197-297 51-157 (344)
311 2o55_A Putative glycerophospho 37.5 41 0.0014 31.9 5.5 58 280-353 201-258 (258)
312 3ffs_A Inosine-5-monophosphate 37.4 29 0.00099 35.9 4.7 43 26-70 139-181 (400)
313 1f76_A Dihydroorotate dehydrog 37.2 39 0.0013 33.4 5.5 74 189-267 221-322 (336)
314 2wkj_A N-acetylneuraminate lya 37.1 2.5E+02 0.0086 27.3 11.4 89 257-356 46-137 (303)
315 3ctl_A D-allulose-6-phosphate 37.1 2.4E+02 0.0081 26.5 10.8 126 197-351 18-157 (231)
316 4h2h_A Mandelate racemase/muco 37.0 74 0.0025 32.1 7.7 77 4-86 126-204 (376)
317 3f4w_A Putative hexulose 6 pho 36.8 57 0.0019 29.6 6.2 105 205-332 24-134 (211)
318 2gou_A Oxidoreductase, FMN-bin 36.8 2.2E+02 0.0075 28.6 11.2 121 189-332 150-322 (365)
319 2dpr_A CON-T(K7GLA); conantoxi 36.8 26 0.00087 21.3 2.4 15 59-73 3-17 (26)
320 1nu5_A Chloromuconate cycloiso 36.6 62 0.0021 32.4 7.0 46 37-85 149-195 (370)
321 3qc0_A Sugar isomerase; TIM ba 36.5 45 0.0015 31.0 5.6 100 197-296 22-141 (275)
322 1tzz_A Hypothetical protein L1 36.5 63 0.0021 32.7 7.1 62 21-85 150-217 (392)
323 3zwt_A Dihydroorotate dehydrog 36.4 59 0.002 33.0 6.8 99 188-293 229-355 (367)
324 2uva_G Fatty acid synthase bet 36.3 89 0.003 39.1 9.4 118 196-331 657-794 (2060)
325 1q77_A Hypothetical protein AQ 36.3 33 0.0011 28.4 4.1 41 382-423 97-137 (138)
326 1f2d_A 1-aminocyclopropane-1-c 36.0 1E+02 0.0035 30.4 8.5 127 281-423 82-225 (341)
327 4e4u_A Mandalate racemase/muco 36.0 2E+02 0.0067 29.4 10.8 52 238-296 255-308 (412)
328 1v71_A Serine racemase, hypoth 35.9 2.1E+02 0.0072 27.8 10.7 115 282-423 88-207 (323)
329 4e8g_A Enolase, mandelate race 35.9 93 0.0032 31.7 8.2 74 4-86 140-218 (391)
330 3a5f_A Dihydrodipicolinate syn 35.8 51 0.0018 32.1 6.0 97 197-297 26-133 (291)
331 1tkk_A Similar to chloromucona 35.8 73 0.0025 31.8 7.4 46 37-85 147-192 (366)
332 1ve5_A Threonine deaminase; ri 35.7 1.9E+02 0.0063 28.0 10.2 115 282-423 79-202 (311)
333 3fg9_A Protein of universal st 35.7 48 0.0016 28.1 5.2 42 381-423 105-155 (156)
334 3cgm_A SLYD, peptidyl-prolyl C 35.5 1.2E+02 0.004 27.0 7.8 59 102-162 46-113 (158)
335 4adt_A Pyridoxine biosynthetic 35.3 1.5E+02 0.005 29.2 9.3 171 194-400 30-237 (297)
336 1wa3_A 2-keto-3-deoxy-6-phosph 35.3 2.4E+02 0.0083 25.1 10.4 121 200-353 77-201 (205)
337 2yci_X 5-methyltetrahydrofolat 35.2 63 0.0022 31.4 6.5 53 36-90 38-90 (271)
338 2gm3_A Unknown protein; AT3G01 35.2 54 0.0018 28.4 5.6 41 382-423 112-161 (175)
339 3dzv_A 4-methyl-5-(beta-hydrox 35.1 52 0.0018 32.0 5.9 46 247-297 49-94 (273)
340 1rqb_A Transcarboxylase 5S sub 34.9 1.8E+02 0.0063 31.1 10.6 185 189-404 43-254 (539)
341 2kr7_A FKBP-type peptidyl-prol 34.9 1.3E+02 0.0046 26.2 8.1 60 102-163 56-123 (151)
342 3hgj_A Chromate reductase; TIM 34.7 1.5E+02 0.0053 29.4 9.6 129 189-332 141-318 (349)
343 3l12_A Putative glycerophospho 34.7 1.3E+02 0.0044 29.3 8.8 51 280-350 257-307 (313)
344 1j6o_A TATD-related deoxyribon 34.5 1.3E+02 0.0046 28.2 8.7 102 193-298 27-140 (268)
345 3o63_A Probable thiamine-phosp 34.4 85 0.0029 29.9 7.2 46 34-79 45-99 (243)
346 3tak_A DHDPS, dihydrodipicolin 34.4 2.8E+02 0.0095 26.8 11.1 90 257-357 36-128 (291)
347 3eul_A Possible nitrate/nitrit 34.3 1.9E+02 0.0065 23.7 8.9 79 386-484 53-136 (152)
348 1o58_A O-acetylserine sulfhydr 34.3 1.4E+02 0.0048 28.8 9.0 114 282-423 79-203 (303)
349 1xi3_A Thiamine phosphate pyro 34.1 92 0.0032 28.0 7.2 44 35-78 29-72 (215)
350 1ece_A Endocellulase E1; glyco 34.1 45 0.0015 32.8 5.4 52 35-88 47-118 (358)
351 3daq_A DHDPS, dihydrodipicolin 33.9 3.3E+02 0.011 26.3 11.9 96 251-357 30-129 (292)
352 2nv1_A Pyridoxal biosynthesis 33.8 63 0.0021 31.6 6.3 37 317-353 223-259 (305)
353 3gg7_A Uncharacterized metallo 33.7 74 0.0025 30.5 6.7 96 194-298 15-125 (254)
354 1e0t_A Pyruvate kinase, PK; ph 33.6 2.3E+02 0.0078 29.8 10.9 150 122-289 121-337 (470)
355 3toy_A Mandelate racemase/muco 33.6 1.8E+02 0.0061 29.4 10.0 72 5-86 145-221 (383)
356 3tva_A Xylose isomerase domain 33.6 2.6E+02 0.0087 26.1 10.6 35 200-234 28-66 (290)
357 3mqt_A Mandelate racemase/muco 33.6 1.3E+02 0.0045 30.5 8.9 75 4-85 119-207 (394)
358 2vef_A Dihydropteroate synthas 33.4 1.3E+02 0.0045 29.8 8.6 70 19-90 7-97 (314)
359 3dlo_A Universal stress protei 33.2 86 0.0029 26.8 6.5 42 381-423 104-154 (155)
360 1o60_A 2-dehydro-3-deoxyphosph 33.0 1.3E+02 0.0046 29.4 8.5 97 221-341 78-175 (292)
361 1jmv_A USPA, universal stress 32.9 72 0.0025 26.2 5.8 42 381-423 89-136 (141)
362 1v8a_A Hydroxyethylthiazole ki 32.9 52 0.0018 31.6 5.5 48 247-299 47-94 (265)
363 1xg4_A Probable methylisocitra 32.8 1.7E+02 0.0059 28.7 9.3 105 195-320 170-277 (295)
364 1x1o_A Nicotinate-nucleotide p 32.8 36 0.0012 33.5 4.3 60 195-263 206-268 (286)
365 2v5j_A 2,4-dihydroxyhept-2-ENE 32.6 1.8E+02 0.0063 28.2 9.4 90 224-333 30-119 (287)
366 1xky_A Dihydrodipicolinate syn 32.6 2.9E+02 0.0098 26.9 10.9 95 251-356 40-138 (301)
367 3vav_A 3-methyl-2-oxobutanoate 32.5 3.6E+02 0.012 26.2 13.2 94 189-296 33-147 (275)
368 3r2g_A Inosine 5'-monophosphat 32.5 36 0.0012 34.6 4.4 47 25-71 92-138 (361)
369 2rdx_A Mandelate racemase/muco 32.4 57 0.0019 32.9 5.9 73 5-85 122-196 (379)
370 3nl6_A Thiamine biosynthetic b 32.3 64 0.0022 34.6 6.5 45 35-79 28-72 (540)
371 1ceo_A Cellulase CELC; glycosy 32.3 63 0.0022 31.5 6.1 52 33-86 29-90 (343)
372 1zzm_A Putative deoxyribonucle 32.3 1.7E+02 0.0057 27.1 8.9 97 200-298 26-134 (259)
373 1tv5_A Dhodehase, dihydroorota 32.3 1.2E+02 0.0041 31.7 8.4 87 234-332 296-402 (443)
374 2r8w_A AGR_C_1641P; APC7498, d 32.2 2.6E+02 0.009 27.7 10.7 95 252-357 63-161 (332)
375 3nco_A Endoglucanase fncel5A; 32.1 74 0.0025 30.8 6.5 53 33-87 42-104 (320)
376 1jub_A Dihydroorotate dehydrog 32.0 1.4E+02 0.0046 29.0 8.5 100 190-293 169-299 (311)
377 4dbe_A Orotidine 5'-phosphate 31.9 74 0.0025 29.9 6.2 81 200-286 129-210 (222)
378 3bdk_A D-mannonate dehydratase 31.9 31 0.0011 35.4 3.8 85 193-297 31-123 (386)
379 3ozy_A Putative mandelate race 31.6 1.5E+02 0.0051 30.0 9.0 72 5-85 125-202 (389)
380 1o4u_A Type II quinolic acid p 31.6 20 0.00068 35.4 2.2 64 195-264 203-269 (285)
381 1y8q_A Ubiquitin-like 1 activa 31.6 1.2E+02 0.0042 30.2 8.2 66 220-297 91-156 (346)
382 2v9d_A YAGE; dihydrodipicolini 31.5 2.6E+02 0.0088 27.9 10.5 94 252-356 60-157 (343)
383 1vc4_A Indole-3-glycerol phosp 31.4 94 0.0032 29.7 7.0 128 197-348 120-252 (254)
384 3iwp_A Copper homeostasis prot 31.3 2.2E+02 0.0077 27.9 9.7 119 196-334 115-240 (287)
385 3mkc_A Racemase; metabolic pro 31.2 1.4E+02 0.0047 30.3 8.6 75 4-85 124-212 (394)
386 2ojp_A DHDPS, dihydrodipicolin 31.2 2E+02 0.0068 27.8 9.5 95 251-356 29-127 (292)
387 2whl_A Beta-mannanase, baman5; 31.1 52 0.0018 31.6 5.1 52 34-87 33-86 (294)
388 3dz1_A Dihydrodipicolinate syn 31.0 2.6E+02 0.009 27.3 10.4 87 257-356 43-132 (313)
389 7a3h_A Endoglucanase; hydrolas 31.0 59 0.002 31.5 5.5 54 32-87 43-102 (303)
390 2jep_A Xyloglucanase; family 5 30.9 90 0.0031 31.2 7.1 54 33-88 70-133 (395)
391 4dt4_A FKBP-type 16 kDa peptid 30.9 1.4E+02 0.0047 26.9 7.6 60 102-163 74-142 (169)
392 3aof_A Endoglucanase; glycosyl 30.9 69 0.0023 30.8 6.0 52 34-87 35-96 (317)
393 3knb_A Titin; IG-like, titin, 30.6 92 0.0031 24.4 5.8 70 99-169 13-85 (100)
394 3p6l_A Sugar phosphate isomera 30.5 1.8E+02 0.006 26.8 8.7 37 200-236 29-80 (262)
395 2og9_A Mandelate racemase/muco 30.5 81 0.0028 31.9 6.7 73 5-85 137-214 (393)
396 1i60_A IOLI protein; beta barr 30.4 2.7E+02 0.0091 25.5 10.0 34 200-233 21-60 (278)
397 2y1h_A Putative deoxyribonucle 30.4 68 0.0023 30.2 5.8 105 194-299 21-147 (272)
398 4drs_A Pyruvate kinase; glycol 30.4 4.3E+02 0.015 28.2 12.4 232 122-422 164-474 (526)
399 2aam_A Hypothetical protein TM 30.3 1.5E+02 0.0051 29.4 8.4 90 200-296 129-245 (309)
400 1eye_A DHPS 1, dihydropteroate 30.0 83 0.0028 30.8 6.4 69 20-91 4-93 (280)
401 1vcf_A Isopentenyl-diphosphate 30.0 78 0.0027 31.3 6.4 31 291-333 256-286 (332)
402 4d9b_A D-cysteine desulfhydras 29.9 1.8E+02 0.0061 28.7 9.1 40 384-423 185-232 (342)
403 3n9k_A Glucan 1,3-beta-glucosi 29.8 52 0.0018 33.8 5.1 51 34-86 75-134 (399)
404 1g01_A Endoglucanase; alpha/be 29.8 60 0.0021 32.4 5.5 53 33-87 54-112 (364)
405 3qvq_A Phosphodiesterase OLEI0 29.7 82 0.0028 29.7 6.2 103 208-350 145-249 (252)
406 3dwg_A Cysteine synthase B; su 29.5 2.7E+02 0.0093 27.2 10.3 10 489-498 178-187 (325)
407 4d9i_A Diaminopropionate ammon 29.4 1.5E+02 0.0051 30.0 8.5 117 282-423 126-258 (398)
408 1zcc_A Glycerophosphodiester p 29.3 1.2E+02 0.004 28.5 7.3 53 280-352 183-236 (248)
409 3h8v_A Ubiquitin-like modifier 29.2 1E+02 0.0034 30.3 6.8 68 220-297 90-168 (292)
410 3pzt_A Endoglucanase; alpha/be 29.1 71 0.0024 31.5 5.8 54 32-87 68-127 (327)
411 3idf_A USP-like protein; unive 29.1 50 0.0017 27.2 4.1 39 382-423 91-137 (138)
412 3ngj_A Deoxyribose-phosphate a 29.0 2.1E+02 0.0073 27.2 8.9 119 291-423 76-206 (239)
413 4dpp_A DHDPS 2, dihydrodipicol 29.0 1E+02 0.0035 31.3 7.0 95 197-297 84-189 (360)
414 3ipw_A Hydrolase TATD family p 28.8 62 0.0021 32.3 5.3 106 192-298 51-175 (325)
415 1viz_A PCRB protein homolog; s 28.8 50 0.0017 31.6 4.4 57 23-83 9-68 (240)
416 3my9_A Muconate cycloisomerase 28.7 84 0.0029 31.7 6.4 73 4-85 122-198 (377)
417 3a24_A Alpha-galactosidase; gl 28.6 1.4E+02 0.0048 32.7 8.5 99 191-296 308-423 (641)
418 1jw9_B Molybdopterin biosynthe 28.5 99 0.0034 29.2 6.6 66 221-297 87-152 (249)
419 4h3d_A 3-dehydroquinate dehydr 28.4 3.8E+02 0.013 25.5 10.8 137 181-332 20-176 (258)
420 2gl5_A Putative dehydratase pr 28.4 2E+02 0.007 29.0 9.4 49 5-57 117-181 (410)
421 1zmr_A Phosphoglycerate kinase 28.3 33 0.0011 35.3 3.2 286 35-415 41-351 (387)
422 2osx_A Endoglycoceramidase II; 28.3 73 0.0025 33.1 6.1 53 32-86 65-126 (481)
423 1h5y_A HISF; histidine biosynt 28.3 81 0.0028 28.9 5.8 80 200-294 161-251 (253)
424 3sr7_A Isopentenyl-diphosphate 28.2 1.1E+02 0.0038 31.1 7.1 91 219-332 196-307 (365)
425 3loq_A Universal stress protei 28.2 1.9E+02 0.0066 27.1 8.7 34 389-423 118-160 (294)
426 1xwy_A DNAse TATD, deoxyribonu 28.1 1.7E+02 0.006 27.0 8.3 99 194-298 20-132 (264)
427 1tt5_A APPBP1, amyloid protein 28.1 90 0.0031 33.3 6.8 68 220-297 87-155 (531)
428 1o66_A 3-methyl-2-oxobutanoate 28.1 1.2E+02 0.0042 29.6 7.1 34 389-423 169-202 (275)
429 3vc3_A Beta-cyanoalnine syntha 27.8 2.1E+02 0.0073 28.3 9.2 116 282-423 101-225 (344)
430 3eez_A Putative mandelate race 27.7 69 0.0023 32.4 5.5 50 240-296 242-293 (378)
431 2qkf_A 3-deoxy-D-manno-octulos 27.6 2.7E+02 0.0092 27.0 9.6 106 221-350 75-186 (280)
432 3hpd_A Hydroxyethylthiazole ki 27.6 72 0.0025 31.0 5.4 47 246-297 46-92 (265)
433 3q94_A Fructose-bisphosphate a 27.6 1.4E+02 0.0047 29.4 7.5 117 221-341 67-188 (288)
434 1ypf_A GMP reductase; GUAC, pu 27.5 51 0.0017 32.9 4.5 47 25-71 98-146 (336)
435 1h4p_A Glucan 1,3-beta-glucosi 27.5 61 0.0021 33.2 5.2 52 34-87 75-136 (408)
436 3vup_A Beta-1,4-mannanase; TIM 27.5 70 0.0024 30.0 5.3 49 35-85 45-110 (351)
437 2fiq_A Putative tagatose 6-pho 27.3 4.2E+02 0.014 27.3 11.4 59 276-334 61-126 (420)
438 4h83_A Mandelate racemase/muco 27.2 2.3E+02 0.0079 28.5 9.5 76 3-86 138-217 (388)
439 1dbw_A Transcriptional regulat 27.2 2.2E+02 0.0076 22.3 7.8 61 387-459 40-105 (126)
440 1p4c_A L(+)-mandelate dehydrog 27.1 2.2E+02 0.0075 28.8 9.2 90 217-333 213-308 (380)
441 3i4k_A Muconate lactonizing en 27.1 1.2E+02 0.0041 30.6 7.3 65 219-296 235-301 (383)
442 3b4u_A Dihydrodipicolinate syn 27.1 2.6E+02 0.009 27.0 9.6 91 251-355 31-129 (294)
443 2qr6_A IMP dehydrogenase/GMP r 27.1 94 0.0032 31.5 6.5 70 200-271 226-314 (393)
444 3ih1_A Methylisocitrate lyase; 27.0 92 0.0031 30.9 6.1 80 232-332 157-243 (305)
445 3fkr_A L-2-keto-3-deoxyarabona 27.0 4.3E+02 0.015 25.7 11.1 89 257-357 43-138 (309)
446 1ivn_A Thioesterase I; hydrola 27.0 1.1E+02 0.0037 26.6 6.2 52 247-298 51-106 (190)
447 3g0t_A Putative aminotransfera 26.9 81 0.0028 31.4 5.9 50 24-74 374-436 (437)
448 1qpo_A Quinolinate acid phosph 26.8 44 0.0015 32.9 3.7 63 196-264 205-270 (284)
449 4e7p_A Response regulator; DNA 26.6 1.5E+02 0.005 24.4 6.8 62 386-459 58-124 (150)
450 1zud_1 Adenylyltransferase THI 26.6 1.4E+02 0.0046 28.3 7.2 67 220-297 83-149 (251)
451 3si9_A DHDPS, dihydrodipicolin 26.6 3.5E+02 0.012 26.5 10.4 146 257-423 57-208 (315)
452 3gd6_A Muconate cycloisomerase 26.5 56 0.0019 33.2 4.7 75 4-86 114-195 (391)
453 1vc4_A Indole-3-glycerol phosp 26.5 2.9E+02 0.01 26.1 9.6 105 196-332 68-181 (254)
454 3o1n_A 3-dehydroquinate dehydr 26.3 4.4E+02 0.015 25.3 12.1 137 181-332 40-196 (276)
455 2f6u_A GGGPS, (S)-3-O-geranylg 26.2 71 0.0024 30.4 5.0 57 23-83 9-68 (234)
456 3if2_A Aminotransferase; YP_26 26.1 1E+02 0.0034 30.9 6.4 50 24-74 368-439 (444)
457 2qgq_A Protein TM_1862; alpha- 25.9 70 0.0024 31.1 5.1 35 26-60 92-128 (304)
458 4e5t_A Mandelate racemase / mu 25.8 3.5E+02 0.012 27.4 10.5 54 235-296 260-315 (404)
459 4ad1_A Glycosyl hydrolase fami 25.8 1.4E+02 0.0049 30.3 7.6 54 28-82 95-154 (380)
460 3f6p_A Transcriptional regulat 25.6 1.7E+02 0.0057 23.0 6.7 63 385-460 37-104 (120)
461 2pp0_A L-talarate/galactarate 25.6 1.1E+02 0.0038 31.0 6.7 74 4-85 149-227 (398)
462 2rdx_A Mandelate racemase/muco 25.5 2.3E+02 0.0079 28.3 9.0 93 190-297 200-294 (379)
463 1to3_A Putative aldolase YIHT; 25.5 1.3E+02 0.0045 29.6 7.0 52 36-87 112-166 (304)
464 3l5l_A Xenobiotic reductase A; 25.4 2.3E+02 0.0077 28.4 8.9 130 189-332 147-325 (363)
465 4g9p_A 4-hydroxy-3-methylbut-2 25.3 95 0.0032 32.1 6.0 50 34-86 40-89 (406)
466 1m3u_A 3-methyl-2-oxobutanoate 25.1 4.7E+02 0.016 25.2 15.1 147 257-423 38-202 (264)
467 3b2n_A Uncharacterized protein 25.0 2.5E+02 0.0085 22.3 7.8 61 387-459 42-107 (133)
468 1to3_A Putative aldolase YIHT; 24.8 82 0.0028 31.1 5.3 72 200-271 184-262 (304)
469 3luf_A Two-component system re 24.7 4.2E+02 0.014 24.5 13.2 33 289-333 72-104 (259)
470 3i6e_A Muconate cycloisomerase 24.7 1.3E+02 0.0043 30.5 6.9 74 5-86 125-200 (385)
471 3hgj_A Chromate reductase; TIM 24.6 99 0.0034 30.9 6.0 72 191-268 237-323 (349)
472 1ydn_A Hydroxymethylglutaryl-C 24.5 2.3E+02 0.0079 27.2 8.5 53 21-77 72-134 (295)
473 2tps_A Protein (thiamin phosph 24.4 92 0.0032 28.4 5.4 45 35-79 34-81 (227)
474 3cyj_A Mandelate racemase/muco 24.2 3.1E+02 0.011 27.2 9.7 73 4-85 119-195 (372)
475 1ep3_A Dihydroorotate dehydrog 24.1 1.3E+02 0.0046 28.8 6.7 54 234-293 241-297 (311)
476 3ddm_A Putative mandelate race 24.0 1.6E+02 0.0056 29.8 7.6 73 3-85 133-206 (392)
477 3fij_A LIN1909 protein; 11172J 23.9 1.4E+02 0.0048 28.1 6.7 46 250-295 55-112 (254)
478 4hty_A Cellulase; (alpha/beta) 23.9 1E+02 0.0035 30.6 5.9 55 32-88 85-144 (359)
479 1vjz_A Endoglucanase; TM1752, 23.9 1E+02 0.0035 30.0 5.9 53 32-86 36-98 (341)
480 3l49_A ABC sugar (ribose) tran 23.9 3.9E+02 0.013 24.4 9.9 79 210-298 10-93 (291)
481 3jug_A Beta-mannanase; TIM-bar 23.8 68 0.0023 32.2 4.6 51 36-88 58-110 (345)
482 3fv9_G Mandelate racemase/muco 23.7 1.4E+02 0.0048 30.2 7.0 73 5-86 122-202 (386)
483 3u3x_A Oxidoreductase; structu 23.7 1.2E+02 0.0041 30.1 6.5 113 205-354 49-164 (361)
484 3f6c_A Positive transcription 23.7 2.3E+02 0.008 22.3 7.3 77 389-485 41-122 (134)
485 3olq_A Universal stress protei 23.7 2.3E+02 0.0078 26.7 8.3 42 381-423 98-148 (319)
486 3o1n_A 3-dehydroquinate dehydr 23.5 3.5E+02 0.012 26.1 9.5 147 190-354 116-275 (276)
487 3ve9_A Orotidine-5'-phosphate 23.5 63 0.0022 30.3 4.0 80 197-283 119-200 (215)
488 2nql_A AGR_PAT_674P, isomerase 23.4 1.1E+02 0.0038 30.8 6.2 70 6-85 142-215 (388)
489 3cu5_A Two component transcrip 23.3 2.7E+02 0.0093 22.5 7.8 62 386-459 41-107 (141)
490 3g7q_A Valine-pyruvate aminotr 23.3 1.3E+02 0.0043 29.7 6.5 50 24-74 342-412 (417)
491 2g0w_A LMO2234 protein; putati 23.2 2.3E+02 0.0079 26.7 8.2 131 194-356 37-175 (296)
492 3l0g_A Nicotinate-nucleotide p 23.2 46 0.0016 33.1 3.0 67 196-271 218-294 (300)
493 3inp_A D-ribulose-phosphate 3- 23.2 2.1E+02 0.007 27.3 7.7 115 197-338 45-170 (246)
494 4ew6_A D-galactose-1-dehydroge 23.2 1.3E+02 0.0044 29.5 6.5 83 247-354 69-156 (330)
495 2c0h_A Mannan endo-1,4-beta-ma 22.9 98 0.0034 30.0 5.5 49 35-85 48-111 (353)
496 1tzj_A ACC deaminase, 1-aminoc 22.7 2.4E+02 0.0084 27.4 8.5 126 282-423 83-222 (338)
497 2z6i_A Trans-2-enoyl-ACP reduc 22.7 5.4E+02 0.018 25.0 12.0 109 195-333 26-138 (332)
498 3iau_A Threonine deaminase; py 22.7 5.6E+02 0.019 25.3 12.4 115 282-423 122-241 (366)
499 3cny_A Inositol catabolism pro 22.5 1.3E+02 0.0046 28.1 6.3 33 200-234 38-70 (301)
500 1m3u_A 3-methyl-2-oxobutanoate 22.5 5.2E+02 0.018 24.9 10.4 130 190-333 22-182 (264)
No 1
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.8e-139 Score=1114.92 Aligned_cols=487 Identities=49% Similarity=0.821 Sum_probs=453.0
Q ss_pred CCcccccccccCCCCCCCCCeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHH-hcCCcEE
Q 010443 2 ANIDIEGLLRDVPNDKRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMH-NTQILCA 80 (510)
Q Consensus 2 ~~~~~~~~~~~~p~~~~~~~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~-~~~~~v~ 80 (510)
++++++++|++.+++.+.|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|++++ ++|+|++
T Consensus 28 ~~~~~~~i~~~~~~~~~~rkTKIV~TiGPas~s~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~~~~~va 107 (520)
T 3khd_A 28 ANITLRQILEPNNVNLRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQELRPNCLLG 107 (520)
T ss_dssp HTCCHHHHSCCC-CCGGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCSSCCCE
T ss_pred CCcCHHHhcCCCCCcccCCCcEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhcCCceE
Confidence 478999999986677889999999999999999999999999999999999999999999999999999999 8999999
Q ss_pred EEecCCCCeeEeeecCCCCcEEecCCCEEEEEecCCCCCCccEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCC
Q 010443 81 VMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSG 160 (510)
Q Consensus 81 i~~Dl~Gp~iR~g~~~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~ 160 (510)
||+||||||||+|.++++ .++|++|+.++|+.++...|+.+.++++|++|++++++||.||+|||+|.|+|++++ ++
T Consensus 108 IllDl~GPkIR~G~~~~~-~~~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~--~~ 184 (520)
T 3khd_A 108 MLLDTKGPEIRTGFLKNK-EVHLKEGSKLKLVTDYEFLGDETCIACSYKKLPQSVKPGNIILIADGSVSCKVLETH--ED 184 (520)
T ss_dssp EEEECCCCCEEBCEEC------------CEEESCTTCEECTTEEEBSCTTHHHHCCC-CEEEETTTTEEEEEEEEC--SS
T ss_pred EEEeCCCCeEEeeccCCC-CeEecCCCEEEEecCCCcCCCccEEecccHHHHhhcCcCcEEEEeCCEEEEEEEEEE--CC
Confidence 999999999999999864 359999999999998667789999999999999999999999999999999999994 67
Q ss_pred eEEEEEeeCeEecCCCCcccCCccccCCCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEE
Q 010443 161 TVRCRCENTAMLGERKNVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSK 240 (510)
Q Consensus 161 ~i~~~v~~~G~l~s~K~vnlp~~~~~lp~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~Iiak 240 (510)
.+.|+|.+||.|+++||||+||..+++|.||+||++||.+|++++|+|||++|||++++||.++|+++.+.|.++.||||
T Consensus 185 ~v~~~V~~gG~L~~~KgvNlPg~~~~lp~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~g~~i~IIAK 264 (520)
T 3khd_A 185 HVITEVLNSAVIGERKNMNLPNVKVDLPIISEKDKNDILNFAIPMGCNFIAASFIQSADDVRLIRNLLGPRGRHIKIIPK 264 (520)
T ss_dssp CEEEEECC-CCCCSSCEEECTTSCCCSCSSCHHHHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEE
T ss_pred EEEEEEEeCeEEeCCceeecCCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCcEEEE
Confidence 89999999999999999999999999999999999999679999999999999999999999999999999999999999
Q ss_pred ecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH
Q 010443 241 VENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN 320 (510)
Q Consensus 241 IEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~ 320 (510)
|||++||+|+|||++++|||||||||||+|+|+++||.+||+|+.+|+++|||||+||||||||++||+|||||++||+|
T Consensus 265 IE~~eav~nldeIl~~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVan 344 (520)
T 3khd_A 265 IENIEGIIHFDKILAESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVAN 344 (520)
T ss_dssp ECSHHHHHTHHHHHHHSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHH
T ss_pred ECCHHHHHhHHHHHHhCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEE
Q 010443 321 AVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVV 400 (510)
Q Consensus 321 av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv 400 (510)
||+||+||+|||+|||.|+||+|||++|++||+++|+.++|...|+......+.+.+..+++|.+|+++|++++|++||+
T Consensus 345 AVldGaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~ 424 (520)
T 3khd_A 345 AVLDGTDCVMLSGETAGGKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNAIETPISVQEAVARSAVETAESIQASLIIA 424 (520)
T ss_dssp HHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHhCCCEEEecccccCCcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999999999999999999999988887876654445566789999999999999999999999
Q ss_pred EcCCchHHHHHHhhCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCCCCcCCCccCHHHHHHHHHHHH
Q 010443 401 LTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSA 480 (510)
Q Consensus 401 ~T~sG~tA~~iSr~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~ 480 (510)
||.||+||+++|||||.|||||+ | ++++++|||+|+|||+|++++.. .+.+++++.|++++
T Consensus 425 ~T~SG~TA~~vSr~RP~~PIia~-------T------~~~~~~r~l~L~~GV~p~~~~~~------~~~d~~~~~a~~~~ 485 (520)
T 3khd_A 425 LTETGYTARLIAKYKPSCTILAL-------S------ASDSTVKCLNVHRGVTCIKVGSF------QGTDIVIRNAIEIA 485 (520)
T ss_dssp ECSSSHHHHHHHHTCCSSEEEEE-------E------SCHHHHHHGGGSTTEEEEECCSC------CCHHHHHHHHHHHH
T ss_pred ECCCcHHHHHHHhcCCCCCEEEE-------c------CCHHHHHHHhccCCeEEEEeCCC------CCHHHHHHHHHHHH
Confidence 99999999999999999999999 4 99999999999999999998764 67899999999999
Q ss_pred HHcCCCCCCCEEEEEeec-----CCCcEEEEEEeC
Q 010443 481 IEKGLCSPGDAVVALHRI-----GVASVIKICIVK 510 (510)
Q Consensus 481 ~~~g~v~~GD~VVvv~g~-----g~tn~ikI~~v~ 510 (510)
++.|++++||.||+++|+ |+||++||+.|+
T Consensus 486 ~~~g~~~~GD~vVv~~G~~~g~~G~TN~lrv~~v~ 520 (520)
T 3khd_A 486 KQRNMAKVGDSVIAIHGIKEEVSGGTNLMKVVQIE 520 (520)
T ss_dssp HHTTSSCTTCEEEEEEC-CCSSTTCEEEEEEEECC
T ss_pred HHCCCCCCcCEEEEEeCccCCCCCCCeEEEEEEeC
Confidence 999999999999999998 799999999874
No 2
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=2.7e-138 Score=1106.91 Aligned_cols=488 Identities=51% Similarity=0.837 Sum_probs=457.9
Q ss_pred CCcccccccccCC-CCCCCCCeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhc-CCcE
Q 010443 2 ANIDIEGLLRDVP-NDKRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNT-QILC 79 (510)
Q Consensus 2 ~~~~~~~~~~~~p-~~~~~~~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~-~~~v 79 (510)
++++|.++|+|++ .+++.|||||||||||+|+++|.|++|+++||||||||||||++++|+++++++|++++++ |+|+
T Consensus 17 ~~~~l~~i~~~~~~~~~~~rkTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~~v 96 (511)
T 3gg8_A 17 QGIRMSQILEPRSEEDWTAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPEARL 96 (511)
T ss_dssp ----CTTTTCCCCHHHHTTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCTTCCC
T ss_pred cccchhhhcCcccccccccCccEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCCce
Confidence 6889999999754 6678899999999999999999999999999999999999999999999999999999998 9999
Q ss_pred EEEecCCCCeeEeeecCCCCcEEecCCCEEEEEecCCCCCCccEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCC
Q 010443 80 AVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKS 159 (510)
Q Consensus 80 ~i~~Dl~Gp~iR~g~~~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~ 159 (510)
+||+||+|||||+|.+.++++++|++|+.|+|+.++...|+.+.++++|++|++++++||.||+|||+|.|+|++++ +
T Consensus 97 aIl~Dl~GPkIR~g~~~~~~~v~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~--~ 174 (511)
T 3gg8_A 97 AILLDTKGPEIRTGFLKDHKPITLQQGATLKIVTDYNLIGDETTIACSYGALPQSVKPGNTILIADGSLSVKVVEVG--S 174 (511)
T ss_dssp EEEEECCCCCCBBCC-----CEEECTTCEEEEESCTTCCCCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEC--S
T ss_pred EEEEECCCCEEecccCCCCCCEEEccCCEEEEEECCCCCCCCCEEEcchHHHHhhcCCCCEEEEECCEEEEEEEEEe--C
Confidence 99999999999999998755799999999999998777899999999999999999999999999999999999994 7
Q ss_pred CeEEEEEeeCeEecCCCCcccCCccccCCCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEE
Q 010443 160 GTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMS 239 (510)
Q Consensus 160 ~~i~~~v~~~G~l~s~K~vnlp~~~~~lp~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~Iia 239 (510)
+.+.|+|.+||.|+++||||+||..+++|.||+||++||.+|++++|+|||++|||++++|++++|+++.+.|.++.|||
T Consensus 175 ~~i~~~V~~gG~L~~~KgvNlPg~~~~lp~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iia 254 (511)
T 3gg8_A 175 DYVITQAQNTATIGERKNMNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIP 254 (511)
T ss_dssp SEEEEEESSCEEECSSCBEECTTCCCCSCSSCHHHHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEE
T ss_pred CEEEEEEEeCeEEcCCcceecCCCccCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCCeEEE
Confidence 78999999999999999999999999999999999999966999999999999999999999999999999888999999
Q ss_pred EecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHH
Q 010443 240 KVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVA 319 (510)
Q Consensus 240 kIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~ 319 (510)
||||++||+|+|+|++++|||||||||||+|+|+++||.+||+|+++|+++|||||+||||||||++||+|||||++||+
T Consensus 255 KIE~~eav~nldeIl~~sDgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVA 334 (511)
T 3gg8_A 255 KIENVEGLVNFDEILAEADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVA 334 (511)
T ss_dssp EECSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHH
T ss_pred EECCHHHHHhHHHHHHhCCeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEE
Q 010443 320 NAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIV 399 (510)
Q Consensus 320 ~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIv 399 (510)
|||+||+||+|||+|||.|+||+|||++|++||+++|+.++|...|++.......+.+..+++|.+|+++|++++|++||
T Consensus 335 nAV~dGaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv 414 (511)
T 3gg8_A 335 NAVLDGTDCVMLSGETANGEFPVITVETMARICYEAETCVDYPALYRAMCLAVPPPISTQEAVARAAVETAECVNAAIIL 414 (511)
T ss_dssp HHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHhCCCEEEecccccCCCCHHHHHHHHHHHHHHHHhchhHHHHHhhhhhcccCCCCHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999999999999999999999988887776654444456678899999999999999999999
Q ss_pred EEcCCchHHHHHHhhCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCCCCcCCCccCHHHHHHHHHHH
Q 010443 400 VLTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKS 479 (510)
Q Consensus 400 v~T~sG~tA~~iSr~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~ 479 (510)
+||.||+||+++|||||.|||||+ | ++++++|||+|+|||+|++++.. .+.+++++.|+++
T Consensus 415 ~~T~SG~tA~~iSr~RP~~PIia~-------T------~~~~~~r~l~L~~GV~p~~~~~~------~~~d~~~~~a~~~ 475 (511)
T 3gg8_A 415 ALTETGQTARLIAKYRPMQPILAL-------S------ASESTIKHLQVIRGVTTMQVPSF------QGTDHVIRNAIVV 475 (511)
T ss_dssp EECSSSHHHHHHHHTCCSSCEEEE-------E------SCHHHHHHGGGSTTEEEEECCC--------CHHHHHHHHHHH
T ss_pred EECCCchHHHHHHhhCCCCCEEEE-------c------CCHHHHHHhhccCCeEEEEeCCC------CCHHHHHHHHHHH
Confidence 999999999999999999999999 4 99999999999999999998764 5789999999999
Q ss_pred HHHcCCCCCCCEEEEEeec-----CCCcEEEEEEeC
Q 010443 480 AIEKGLCSPGDAVVALHRI-----GVASVIKICIVK 510 (510)
Q Consensus 480 ~~~~g~v~~GD~VVvv~g~-----g~tn~ikI~~v~ 510 (510)
++++|++++||.||+++|+ |+||++||+.|+
T Consensus 476 ~~~~g~~~~GD~vVi~~G~~~g~~G~TN~lrv~~v~ 511 (511)
T 3gg8_A 476 AKERELVTEGESIVAVHGMKEEVAGSSNLLKVLTVE 511 (511)
T ss_dssp HHHTTSCCTTCEEEEEEEC------CCEEEEEEECC
T ss_pred HHHCCCCCCcCEEEEEeCccCCCCCCCeEEEEEEcC
Confidence 9999999999999999998 799999999875
No 3
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=1.4e-137 Score=1107.36 Aligned_cols=485 Identities=48% Similarity=0.785 Sum_probs=452.4
Q ss_pred cccccccccCC-CCCCCCCeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHH-hcCCcEEE
Q 010443 4 IDIEGLLRDVP-NDKRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMH-NTQILCAV 81 (510)
Q Consensus 4 ~~~~~~~~~~p-~~~~~~~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~-~~~~~v~i 81 (510)
+.+..+++|.- ++.+.|||||||||||+|+++|.|++|+++||||||||||||++++|+++++++|++++ ++|+||+|
T Consensus 27 ~~~~~~~~~~~~~~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~~vaI 106 (526)
T 4drs_A 27 LGMDKICSPLADNDVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPHSTVGI 106 (526)
T ss_dssp HHHHHC---------CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTTCCCEE
T ss_pred ccchhhhcccccCCcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCCCceEE
Confidence 34566777543 45578999999999999999999999999999999999999999999999999999987 68999999
Q ss_pred EecCCCCeeEeeecCCCCcEEecCCCEEEEEecCCCCCCccEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCe
Q 010443 82 MLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGT 161 (510)
Q Consensus 82 ~~Dl~Gp~iR~g~~~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~ 161 (510)
++||+|||||||.+.++++++|++||.|+|+.+....|+.+.++++|+++++++++||.||+|||+|.|+|++++ ++.
T Consensus 107 l~Dl~GPkIR~g~~~~~~~i~L~~G~~v~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~--~~~ 184 (526)
T 4drs_A 107 MLDTKGPEIRTGMLEGGKPIELKAGQTLKITTDYSMLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQVLEIG--DDF 184 (526)
T ss_dssp EEECCCSCCBBCCBSTTCCEECCTTSEEEEESCCSSCBCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEC--SSE
T ss_pred EEECCCCeeEEEecCCCCeEEecCCCEEEEEeCCccCCCcceeeecchhhHHHhcCCCEEEEeCCCceEEEEEEe--CCe
Confidence 999999999999999877899999999999998777899999999999999999999999999999999999994 678
Q ss_pred EEEEEeeCeEecCCCCcccCCccccCCCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCC-------CC
Q 010443 162 VRCRCENTAMLGERKNVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHA-------KN 234 (510)
Q Consensus 162 i~~~v~~~G~l~s~K~vnlp~~~~~lp~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~-------~~ 234 (510)
+.|+|.+||.|+++||||+|+..+++|.||+||.+|+.+||+++|+|||++|||++++||.++|++|.+.| .+
T Consensus 185 i~~~V~~gG~L~~~KgvNlP~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~ 264 (526)
T 4drs_A 185 IVCKVLNSVTIGERKNMNLPGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSS 264 (526)
T ss_dssp EEEECCSCCEECSSCBEECTTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCC
T ss_pred EEEEeccCccccccccccCCCcccCcccccchhHHHHHHHHHHhccCeeeecccCchhhHHHHHHHHHhhCccccccccc
Confidence 99999999999999999999999999999999999843899999999999999999999999999998876 36
Q ss_pred ceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHh
Q 010443 235 IQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAE 314 (510)
Q Consensus 235 ~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraE 314 (510)
++||||||+++|++|||+|++++|||||+|||||+|+|+++||.+||+|+++|+++|||||+||||||||++||+|||||
T Consensus 265 i~IiaKIE~~~av~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAE 344 (526)
T 4drs_A 265 IKIISKIENLEGVINFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAE 344 (526)
T ss_dssp CEEEEEECSHHHHHTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHH
T ss_pred ceeeeehhccHHHHHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCch
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcC
Q 010443 315 ATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKAR 394 (510)
Q Consensus 315 v~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~ 394 (510)
++||||||+||+||+|||+|||.|+||+|||++|++||+++|+.++|+..|+......+.+.+..+++|.+|+++|.+++
T Consensus 345 vsDVAnAV~DGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~ 424 (526)
T 4drs_A 345 MTDVANAVLDGSDCVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHSSVPKPVAVPEAIACSAVESAHDVN 424 (526)
T ss_dssp HHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCceEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhhhccCCCCCHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999988887766667778889999999999999999
Q ss_pred CcEEEEEcCCchHHHHHHhhCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCCCCcCCCccCHHHHHH
Q 010443 395 AKLIVVLTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEGSAKATDAESTEVILE 474 (510)
Q Consensus 395 a~aIvv~T~sG~tA~~iSr~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~ 474 (510)
|++||+||.||+||+++|||||.|||||+ | ++++++|||+|+|||+|++++.. .+.+++++
T Consensus 425 a~aIv~~T~sG~tA~~iSr~RP~~pI~a~-------T------~~~~~~r~l~L~wGV~p~~~~~~------~~~d~~i~ 485 (526)
T 4drs_A 425 AKLIITITETGNTARLISKYRPSQTIIAC-------T------AKPEVARGLKIARGVKTYVLNSI------HHSEVVIS 485 (526)
T ss_dssp CSEEEEECSSSHHHHHHHHTCCSSEEEEE-------E------SCHHHHHHGGGSTTEEEEECSCC------CCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHhhCCCCCEEEE-------C------CCHHHHHhhhccCCeEEEEeCCC------CCHHHHHH
Confidence 99999999999999999999999999999 4 99999999999999999999764 68899999
Q ss_pred HHHHHHHHcCCCCCCCEEEEEeec-----CCCcEEEEEEe
Q 010443 475 GALKSAIEKGLCSPGDAVVALHRI-----GVASVIKICIV 509 (510)
Q Consensus 475 ~a~~~~~~~g~v~~GD~VVvv~g~-----g~tn~ikI~~v 509 (510)
.|+++++++|++++||.||+++|+ |+||+|||+.|
T Consensus 486 ~a~~~~~~~g~~~~GD~vVi~~G~p~g~~G~TN~lrv~~V 525 (526)
T 4drs_A 486 NALALAKEESLIESGDFAIAVHGVKESCPGSCNLMKIVRC 525 (526)
T ss_dssp HHHHHHHHTTSCCTTCEEEEEC----------CCEEEEEC
T ss_pred HHHHHHHHCCCCCCcCEEEEEeccCCCCCCcceEEEEEEC
Confidence 999999999999999999999998 89999999987
No 4
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=9.6e-137 Score=1101.52 Aligned_cols=478 Identities=46% Similarity=0.753 Sum_probs=457.2
Q ss_pred CCCCCeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHh------cCCcEEEEecCCCCee
Q 010443 17 KRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHN------TQILCAVMLDTKGPEI 90 (510)
Q Consensus 17 ~~~~~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~------~~~~v~i~~Dl~Gp~i 90 (510)
.+.|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|+++++ +|+|++||+|||||||
T Consensus 59 ~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~a~~~~~~~~~~~~~vaIllDlkGPkI 138 (550)
T 3gr4_A 59 ITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEI 138 (550)
T ss_dssp CSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTTTTCTTTCCCCEEEEECCCSCC
T ss_pred ccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhhccccccCceEEEEEeCCCCEE
Confidence 4579999999999999999999999999999999999999999999999999999998 8999999999999999
Q ss_pred EeeecCCC--CcEEecCCCEEEEEecC--CCCCCccEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEE
Q 010443 91 RTGFLKDG--KPIQLKEGQEITVSTDY--DFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRC 166 (510)
Q Consensus 91 R~g~~~~~--~~i~l~~G~~v~l~~~~--~~~~~~~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~i~~~v 166 (510)
|+|.+.++ .+++|++|+.|+|+.+. ...|+.+.+++||++|++++++||.||+|||+|.|+|++++ ++.+.|+|
T Consensus 139 R~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~--~~~v~~~V 216 (550)
T 3gr4_A 139 RTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKG--ADFLVTEV 216 (550)
T ss_dssp BBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEC--SSEEEEEE
T ss_pred EEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEe--CCEEEEEE
Confidence 99999753 47999999999999873 35788999999999999999999999999999999999994 67899999
Q ss_pred eeCeEecCCCCcccCCccccCCCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHH
Q 010443 167 ENTAMLGERKNVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEG 246 (510)
Q Consensus 167 ~~~G~l~s~K~vnlp~~~~~lp~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~a 246 (510)
.+||.|+++||||+||..+++|.||++|++|| +|++++|+|||++|||++++|++++|+++.+.|.++.|||||||++|
T Consensus 217 ~~gG~L~s~KgvNlPg~~l~lpalTekD~~dl-~f~~~~~vD~ia~SfVr~a~Dv~~~r~~L~~~g~~i~IIAKIE~~ea 295 (550)
T 3gr4_A 217 ENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEG 295 (550)
T ss_dssp EECEEECSSCBEECTTSCCCCCSSCHHHHHHH-HHHHHTTCSEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHH
T ss_pred EeCcEEcCCceeecCCCccCCCCCCHHHHHHH-HHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEeCCHHH
Confidence 99999999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCC
Q 010443 247 VVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGT 326 (510)
Q Consensus 247 v~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~ 326 (510)
|+|+|+|++++|||||||||||+|+|+++||.+||+|+.+|+++|||||+||||||||++||+|||||++||+|||+||+
T Consensus 296 v~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeSMi~~p~PTRAEvsDVanAvldG~ 375 (550)
T 3gr4_A 296 VRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGA 375 (550)
T ss_dssp HHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGGGGTCSSCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHHhhcCCCccHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCch
Q 010443 327 DCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGT 406 (510)
Q Consensus 327 D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~T~sG~ 406 (510)
||+|||+|||.|+||+|||++|++||+++|+.++|...|.+.....+.+.+..+++|.+|+++|++++|++||+||.||+
T Consensus 376 DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~ 455 (550)
T 3gr4_A 376 DCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGR 455 (550)
T ss_dssp SEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHTTCSCEEEECSSSH
T ss_pred cEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHHhhhhccCCCCChHHHHHHHHHHHHHhcCCCEEEEECCCcH
Confidence 99999999999999999999999999999999999888877655455567889999999999999999999999999999
Q ss_pred HHHHHHhhCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCC
Q 010443 407 TAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLC 486 (510)
Q Consensus 407 tA~~iSr~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~v 486 (510)
||+++|||||+|||||+ | ++++++|||+|+|||+|++++......|.++.+++++.|+++++++|++
T Consensus 456 TA~~iSr~RP~~PIia~-------T------~~~~~aR~l~L~~GV~P~~~~~~~~~~~~~~~d~~~~~a~~~~~~~g~~ 522 (550)
T 3gr4_A 456 SAHQVARYRPRAPIIAV-------T------RNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFF 522 (550)
T ss_dssp HHHHHHTTCCSSCEEEE-------E------SCHHHHHHGGGSTTEEEEECCSCCCSSHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHhhCCCCCEEEE-------c------CCHHHHHHHhccCCeEEEEecccccccccCCHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999 4 9999999999999999999987666678888999999999999999999
Q ss_pred CCCCEEEEEeec----CCCcEEEEEEeC
Q 010443 487 SPGDAVVALHRI----GVASVIKICIVK 510 (510)
Q Consensus 487 ~~GD~VVvv~g~----g~tn~ikI~~v~ 510 (510)
++||.||+++|+ |+||++||+.|.
T Consensus 523 ~~GD~vVv~~G~~~g~G~TN~lrv~~v~ 550 (550)
T 3gr4_A 523 KKGDVVIVLTGWRPGSGFTNTMRVVPVP 550 (550)
T ss_dssp CTTCEEEEEEESSSSTTCEEEEEEEECC
T ss_pred CCcCEEEEEeCCCCCCCCCeEEEEEEcC
Confidence 999999999998 899999999873
No 5
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=8.8e-137 Score=1093.95 Aligned_cols=477 Identities=44% Similarity=0.735 Sum_probs=450.1
Q ss_pred CCCCCeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCeeEeeecC
Q 010443 17 KRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLK 96 (510)
Q Consensus 17 ~~~~~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp~iR~g~~~ 96 (510)
..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|++++++|+|++||+||||||||+|.+.
T Consensus 17 ~~~rkTKIv~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~g~~vaIl~Dl~GPkIR~g~~~ 96 (499)
T 3hqn_D 17 ANYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELGVNIAIALDTKGPEIRTGQFV 96 (499)
T ss_dssp CSSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCCBBCCBG
T ss_pred ccCCCeEEEEEECCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCcEEEEEeCCCCEEeeeccC
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCcEEecCCCEEEEEecC--CCCCCccEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEeeCeEecC
Q 010443 97 DGKPIQLKEGQEITVSTDY--DFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGE 174 (510)
Q Consensus 97 ~~~~i~l~~G~~v~l~~~~--~~~~~~~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~i~~~v~~~G~l~s 174 (510)
+++.+ |++|+.++|+.+. ...|+.+.++++|++|++++++||.||+|||+|.|+|++++. ++.+.|+|.+||.|++
T Consensus 97 ~~~~v-L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~-~~~i~~~v~~gG~L~~ 174 (499)
T 3hqn_D 97 GGDAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHED-EQTLECTVTNSHTISD 174 (499)
T ss_dssp GGEEE-ECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEEE-TTEEEEEECSCEEEET
T ss_pred CCCeE-EcCCCEEEEEecCcccCCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEcC-CCeEEEEEEeCcEeeC
Confidence 65568 9999999999873 457899999999999999999999999999999999999952 4579999999999999
Q ss_pred CCCcccCCccccCCCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHH
Q 010443 175 RKNVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDIL 254 (510)
Q Consensus 175 ~K~vnlp~~~~~lp~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~ 254 (510)
+||||+||..+++|.||++|++|| +|++++|+|+|++|||++++|++++|+++.+.|.++.|||||||++||+|+|+|+
T Consensus 175 ~KgvNlPg~~~~lp~ltekD~~dl-~~~~~~~vD~i~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl 253 (499)
T 3hqn_D 175 RRGVNLPGCDVDLPAVSAKDRVDL-QFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSII 253 (499)
T ss_dssp TCBEECTTSCCCCCSSCHHHHHHH-HHHHHTTCSEEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHHH
T ss_pred CCceecCCCCCCCCCCCHHHHHHH-HHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999889999999999999999999999
Q ss_pred hhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccC
Q 010443 255 RETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGE 334 (510)
Q Consensus 255 ~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~E 334 (510)
+++|||||||||||+|+|+++||.+||+|+.+|+++|||||+||||||||++||+|||||++||+|||+||+||+|||+|
T Consensus 254 ~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLSgE 333 (499)
T 3hqn_D 254 EESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGE 333 (499)
T ss_dssp HHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESHH
T ss_pred HhCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhh
Q 010443 335 SAAGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKY 414 (510)
Q Consensus 335 ta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~T~sG~tA~~iSr~ 414 (510)
||.|+||+|||++|++||+++|+.++|...|.......+.+.+..+++|.+|+++|++++|++||+||.||+||+++|||
T Consensus 334 TA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~isr~ 413 (499)
T 3hqn_D 334 TAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPMSADEAVCSSAVNSVYETKAKAMVVLSNTGRSARLVAKY 413 (499)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHT
T ss_pred ccCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhh
Confidence 99999999999999999999999999988887665555556778999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEE
Q 010443 415 RPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVA 494 (510)
Q Consensus 415 RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~v~~GD~VVv 494 (510)
||+|||||+ | ++++++|||+|+|||+|++++...... .++.+++++.|++++++.|++++||.||+
T Consensus 414 RP~~pIia~-------T------~~~~~~r~l~L~~GV~p~~~~~~~~~~-~~~~d~~~~~a~~~~~~~g~~~~GD~vVv 479 (499)
T 3hqn_D 414 RPNCPIVCV-------T------TRLQTCRQLNITQGVESVFFDADKLGH-DEGKEHRVAAGVEFAKSKGYVQTGDYCVV 479 (499)
T ss_dssp CCSSCEEEE-------E------SCHHHHHHGGGSTTEEEEECCHHHHCC-CTTCHHHHHHHHHHHHHTTSCCTTCEEEE
T ss_pred CCCCCEEEE-------c------CCHHHHHHhhccCCeEEEEeccccccc-cCCHHHHHHHHHHHHHHcCCCCCcCEEEE
Confidence 999999999 4 999999999999999999987532111 23678999999999999999999999999
Q ss_pred Eeec----CCCcEEEEEEeC
Q 010443 495 LHRI----GVASVIKICIVK 510 (510)
Q Consensus 495 v~g~----g~tn~ikI~~v~ 510 (510)
++|+ |+||++||+.|.
T Consensus 480 ~~G~~~~~G~TN~~rv~~v~ 499 (499)
T 3hqn_D 480 IHADHKVKGYANQTRILLVE 499 (499)
T ss_dssp EEECC-----CEEEEEEECC
T ss_pred EeCCCCCCCCCeEEEEEEcC
Confidence 9998 899999999873
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=3.3e-133 Score=1088.56 Aligned_cols=474 Identities=46% Similarity=0.739 Sum_probs=447.2
Q ss_pred CCCCC-CCCCeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCeeE
Q 010443 13 VPNDK-RLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIR 91 (510)
Q Consensus 13 ~p~~~-~~~~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp~iR 91 (510)
.|.++ ++|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|++++++|+|++|++||+|||||
T Consensus 15 ~~~~~~~~r~TKIv~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~vail~Dl~GPkiR 94 (606)
T 3t05_A 15 VPRGSHMMRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIR 94 (606)
T ss_dssp -------CCCSEEEEECCGGGCSHHHHHHHHHTTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCCCCCB
T ss_pred CcCCcccccCceEEEEcCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCEEE
Confidence 36665 47999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCcEEecCCCEEEEEecCCCCCCccEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEeeCeE
Q 010443 92 TGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAM 171 (510)
Q Consensus 92 ~g~~~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~i~~~v~~~G~ 171 (510)
||.+.+ .+++|++||.++|+.+. ..|+.+.++++|++|++++++||.||+|||+|.|+|++++.+++.+.|+|.+||.
T Consensus 95 ~g~~~~-~~i~L~~G~~~~lt~~~-~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~v~~~V~~gG~ 172 (606)
T 3t05_A 95 THNMKD-GIIELERGNEVIVSMNE-VEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGE 172 (606)
T ss_dssp BCCBTT-SEEECCSSCEEEEESSC-CCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTTTEEEEEECSCCE
T ss_pred eecCCC-CCEEEcCCCEEEEEecC-cCCCCCEEEeccHHHHHhcCCCCEEEEeCCeEEEEEEEEEecCCEEEEEEEECeE
Confidence 999985 57999999999999874 5788899999999999999999999999999999995544468899999999999
Q ss_pred ecCCCCcccCCccccCCCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchH
Q 010443 172 LGERKNVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFD 251 (510)
Q Consensus 172 l~s~K~vnlp~~~~~lp~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nld 251 (510)
|+++||||+|+..+++|.||+||++|| +|++++|+|||++|||++++|++++|+++.+.|.+++|||||||++||+|+|
T Consensus 173 L~~~KgvNlPg~~~~lp~ltekD~~dl-~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nld 251 (606)
T 3t05_A 173 LKNKKGVNLPGVRVSLPGITEKDAEDI-RFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIE 251 (606)
T ss_dssp EETTCBEECSSSCCCCCSSCHHHHHHH-HHHHHTTCSEEEETTCCSHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHH
T ss_pred EeCCceEECCCCccCCCCCChhHHHHH-HHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEe
Q 010443 252 DILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 331 (510)
Q Consensus 252 eI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imL 331 (510)
||++++|||||||||||+|+|+++||.+||+|+++|+++|||||+||||||||++||+|||||++||+|||+||+||+||
T Consensus 252 eIl~~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavML 331 (606)
T 3t05_A 252 EILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVML 331 (606)
T ss_dssp HHHHHCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHhCCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHH
Q 010443 332 SGESAAGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLV 411 (510)
Q Consensus 332 s~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~T~sG~tA~~i 411 (510)
|+|||.|+||+|||++|++||+++|+..+|...|+..... .+.+..+++|.+|+++|++++|++||+||.||+||+++
T Consensus 332 SgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~--~~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~i 409 (606)
T 3t05_A 332 SGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKL--VETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTI 409 (606)
T ss_dssp CHHHHSCSCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH--SCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHhhhhhHhhhhhhccc--cCCCHHHHHHHHHHHHHHhcCCCEEEEEcCCchHHHHH
Confidence 9999999999999999999999999998888777654321 24567899999999999999999999999999999999
Q ss_pred HhhCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCCCCCCE
Q 010443 412 AKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDA 491 (510)
Q Consensus 412 Sr~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~v~~GD~ 491 (510)
|||||+|||||+ | ++++++|||+|+|||+|++++.. .+.+++++.|+++++++|++++||.
T Consensus 410 sr~RP~~pIia~-------t------~~~~~~r~l~L~~GV~p~~~~~~------~~~~~~~~~a~~~~~~~g~~~~GD~ 470 (606)
T 3t05_A 410 SKYRPHSDIIAV-------T------PSEETARQCSIVWGVQPVVKKGR------KSTDALLNNAVATAVETGRVTNGDL 470 (606)
T ss_dssp HHTCCSSEEEEE-------E------SCHHHHHHHHTSSSEEEEECCCC------SSHHHHHHHHHHHHHHTTSCCTTCE
T ss_pred HhhCCCCCEEEE-------c------CCHHHHHhhhccCCeEEEEeCCC------CCHHHHHHHHHHHHHHcCCCCCCCE
Confidence 999999999999 4 99999999999999999998764 5789999999999999999999999
Q ss_pred EEEEeec-----CCCcEEEEEEeC
Q 010443 492 VVALHRI-----GVASVIKICIVK 510 (510)
Q Consensus 492 VVvv~g~-----g~tn~ikI~~v~ 510 (510)
||+++|+ |+||++||+.|.
T Consensus 471 vVi~~G~p~g~~g~tN~~~v~~v~ 494 (606)
T 3t05_A 471 IIITAGVPTGETGTTNMMKIHLVG 494 (606)
T ss_dssp EEEEECSSTTTCSSCCEEEEEECC
T ss_pred EEEEeCccCCCCCCccceEEEEec
Confidence 9999998 899999999863
No 7
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=2.8e-133 Score=1064.11 Aligned_cols=464 Identities=47% Similarity=0.728 Sum_probs=423.4
Q ss_pred CCeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCeeEeeecCCCC
Q 010443 20 PKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGK 99 (510)
Q Consensus 20 ~~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp~iR~g~~~~~~ 99 (510)
|||||||||||+|+++|.|++|+++||||||||||||++++|+++++++|++++++|+|++|++||+|||||+|.+.+++
T Consensus 2 r~tkIv~TiGPas~~~e~l~~li~aGm~v~RlNfsHg~~e~h~~~i~~iR~~~~~~~~~v~il~Dl~GPkiR~g~~~~~~ 81 (470)
T 1e0t_A 2 KKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGN 81 (470)
T ss_dssp CCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCEEBCCBGGGC
T ss_pred CcceEEEECCCccCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCCceEEEEeCCCCEEEEEecCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999998334
Q ss_pred cEEecCCCEEEEEecCCCCCCccEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEeeCeEecCCCCcc
Q 010443 100 PIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVN 179 (510)
Q Consensus 100 ~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~i~~~v~~~G~l~s~K~vn 179 (510)
++.|++||.++|+.+....|+.+.++++|++|++++++||.||+|||+|.|+|++++ ++.+.|+|.+||.|+++||||
T Consensus 82 ~v~L~~G~~~~lt~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~--~~~i~~~v~~gG~L~~~KgvN 159 (470)
T 1e0t_A 82 DVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIE--GNKVICKVLNNGDLGENKGVN 159 (470)
T ss_dssp CEEECTTCEEEEESCTTCCBBTTEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEE--TTEEEEEECSCEEECSSCEEE
T ss_pred ceEEecCCEEEEEeCCccCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEe--CCeEEEEEecCcEEeCCceee
Confidence 799999999999987445788899999999999999999999999999999999995 778999999999999999999
Q ss_pred cCCccccCCCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccC-CCCceEEEEecCHHHHhchHHHHhhcC
Q 010443 180 LPGVVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPH-AKNIQLMSKVENQEGVVNFDDILRETD 258 (510)
Q Consensus 180 lp~~~~~lp~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~-~~~~~IiakIEt~~av~nldeI~~~~D 258 (510)
+||..+++|.||++|.+|| +|++++|+|+|++|||++++|++++++++.+. |.++.|||||||++||+|+++|++++|
T Consensus 160 lPg~~~~lp~ltekD~~Di-~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~~~i~IiakIEt~eav~nldeI~~~sD 238 (470)
T 1e0t_A 160 LPGVSIALPALAEKDKQDL-IFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASD 238 (470)
T ss_dssp CSSCCCCCCSSCHHHHHHH-HHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHSS
T ss_pred cCCCcCCCCCCCcCCHHHH-HHHHHcCCCEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHHCC
Confidence 9999999999999999999 99999999999999999999999999999988 889999999999999999999999999
Q ss_pred eeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCC
Q 010443 259 SFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAG 338 (510)
Q Consensus 259 gI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G 338 (510)
||||||||||+|+|.++++.+|++|+.+|+++|||+|+||||||||++||+|||||++||+|||+||+||+|||+|||.|
T Consensus 239 gImVargDLgveig~e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~dG~DavMLSgETA~G 318 (470)
T 1e0t_A 239 GIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKG 318 (470)
T ss_dssp EEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC----
T ss_pred EEEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCccHHHHhhhhHhhhcCccEEEecccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCC
Q 010443 339 AYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAV 418 (510)
Q Consensus 339 ~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~T~sG~tA~~iSr~RP~~ 418 (510)
+||+|||++|++||+++|+.++|...|..... +.+..+++|.+|+++|++++|++||+||.||+||+++|||||+|
T Consensus 319 ~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~----~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~~ 394 (470)
T 1e0t_A 319 KYPLEAVSIMATICERTDRVMNSRLEFNNDNR----KLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDA 394 (470)
T ss_dssp --CHHHHHHHHHHHHHHHTTCCCCCC-------------CHHHHHHHHHHHHHHTTCSBEEEECSSSHHHHHHHTTCCSS
T ss_pred CCHHHHHHHHHHHHHHHHhhhhhhHHHhhhcc----ccchHHHHHHHHHHHHHhcCCCEEEEECCChhHHHHHHhhCCCC
Confidence 99999999999999999997766444432211 23568999999999999999999999999999999999999999
Q ss_pred cEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEeec
Q 010443 419 PILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVALHRI 498 (510)
Q Consensus 419 PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~v~~GD~VVvv~g~ 498 (510)
||||+ | ++++++|||+|+|||+|++++.. ++.+++++.|+++++++|++++||.||+++|+
T Consensus 395 pI~a~-------t------~~~~~~r~l~l~~GV~p~~~~~~------~~~~~~~~~a~~~~~~~g~~~~GD~vvv~~g~ 455 (470)
T 1e0t_A 395 TILAL-------T------TNEKTAHQLVLSKGVVPQLVKEI------TSTDDFYRLGKELALQSGLAHKGDVVVMVSGA 455 (470)
T ss_dssp BEEEE-------E------SCHHHHHHGGGSTTEEEEECSCC------CSHHHHHHHHHHHHHHTSSSCTTCEEEEEECS
T ss_pred CEEEE-------C------CCHHHHHHhhhhccceEEEecCC------CCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCC
Confidence 99999 4 99999999999999999998653 67899999999999999999999999999997
Q ss_pred ----CCCcEEEEEEe
Q 010443 499 ----GVASVIKICIV 509 (510)
Q Consensus 499 ----g~tn~ikI~~v 509 (510)
|+||++||+.+
T Consensus 456 ~~~~g~tn~~~v~~v 470 (470)
T 1e0t_A 456 LVPSGTTNTASVHVL 470 (470)
T ss_dssp SSCTTCCCEEEEEEC
T ss_pred CCCCCccceEEEEEC
Confidence 89999999875
No 8
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=9.3e-130 Score=1064.33 Aligned_cols=467 Identities=45% Similarity=0.705 Sum_probs=443.4
Q ss_pred CCCeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCeeEeeecCCC
Q 010443 19 LPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDG 98 (510)
Q Consensus 19 ~~~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp~iR~g~~~~~ 98 (510)
.|||||||||||+|+++|.|++|+++||||||||||||++++|+++++++|++++++|+|++|++||+|||||||.+.++
T Consensus 2 ~r~tkIv~TiGPas~~~~~l~~l~~aGm~v~RlNfsHg~~~~h~~~i~~ir~~~~~~~~~v~il~Dl~GPkiR~g~~~~~ 81 (587)
T 2e28_A 2 KRKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTGRTVAILLDTKGPEIRTHNMENG 81 (587)
T ss_dssp CCCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCCCCCBBCCCTTS
T ss_pred CCCceEEEECCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCceEEEEeCCCCEEEEeccCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CcEEecCCCEEEEEecCCCCCCccEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEeeCeEecCCCCc
Q 010443 99 KPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNV 178 (510)
Q Consensus 99 ~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~i~~~v~~~G~l~s~K~v 178 (510)
++.|++|+.++|+.+. ..|+.+.++++|++|++++++||.||+|||+|.|+|++++.+++.+.|+|.+||.|+++|||
T Consensus 82 -~i~l~~G~~~~l~~~~-~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~i~~~v~~gg~l~~~Kgv 159 (587)
T 2e28_A 82 -AIELKEGSKLVISMSE-VLGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVLKNKKGV 159 (587)
T ss_dssp -CBCCCSSCEEEEESSC-CCCCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEETTTTEEEEECCSCCCBCSSCBE
T ss_pred -cEEEecCCEEEEEecC-cCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEecCCCeEEEEEecCCEEcCCcee
Confidence 6999999999999874 56888999999999999999999999999999999999965678999999999999999999
Q ss_pred ccCCccccCCCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCC-CCceEEEEecCHHHHhchHHHHhhc
Q 010443 179 NLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHA-KNIQLMSKVENQEGVVNFDDILRET 257 (510)
Q Consensus 179 nlp~~~~~lp~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~-~~~~IiakIEt~~av~nldeI~~~~ 257 (510)
|+||..+++|.||++|..|| +|++++|+|+|++|||++++|++++++++.+.| .++.|||||||++|++|+|||++++
T Consensus 160 nlPg~~~~lp~ltekD~~di-~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~ 238 (587)
T 2e28_A 160 NVPGVKVNLPGITEKDRADI-LFGIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAA 238 (587)
T ss_dssp ECTTSCCCCCSCCHHHHHHH-HHHHHHTCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHS
T ss_pred ecCCCcCCCCCCCcccHHHH-HHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhC
Confidence 99999999999999999999 999999999999999999999999999999888 4899999999999999999999999
Q ss_pred CeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCC
Q 010443 258 DSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAA 337 (510)
Q Consensus 258 DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~ 337 (510)
|||||||||||+|+|+++||.+||+|+++|+++|||||+||||||||++||+|||||++||+|||+||+||+|||+|||.
T Consensus 239 DgImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavMLSgETA~ 318 (587)
T 2e28_A 239 DGLMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAA 318 (587)
T ss_dssp SEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHT
T ss_pred CEEEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceeeecccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCC
Q 010443 338 GAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPA 417 (510)
Q Consensus 338 G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~T~sG~tA~~iSr~RP~ 417 (510)
|+||+|||++|++||+++|+.++|...|.+... ..+.+..+++|.+|+++|++++|++||+||.||+||+++|||||+
T Consensus 319 G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~--~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~isr~Rp~ 396 (587)
T 2e28_A 319 GQYPVEAVKTMHQIALRTEQALEHRDILSQRTK--ESQTTITDAIGQSVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPK 396 (587)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCS
T ss_pred CCCHHHHHHHHHHHHHHHhhhhhhhhHhhhhhc--ccccchHHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHhcCCC
Confidence 999999999999999999998777555553322 122356899999999999999999999999999999999999999
Q ss_pred CcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEee
Q 010443 418 VPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVALHR 497 (510)
Q Consensus 418 ~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~v~~GD~VVvv~g 497 (510)
|||||+ | ++++++|||+|+|||+|++++.. .+.+++++.|++++++.|++++||.|++++|
T Consensus 397 ~pI~a~-------t------~~~~~~r~l~l~~GV~p~~~~~~------~~~~~~~~~a~~~~~~~G~~k~GD~VVItqG 457 (587)
T 2e28_A 397 APIIAV-------T------SNEAVSRRLALVWGVYTKEAPHV------NTTDEMLDVAVDAAVRSGLVKHGDLVVITAG 457 (587)
T ss_dssp SCEEEE-------E------SSHHHHHHGGGSTTEEEEECCCC------CSHHHHHHHHHHHHHHHTCCCTTCEEEEEEC
T ss_pred CCEEEE-------C------CCHHHHHHHHHhcCceEEecccc------CCHHHHHHHHHHHHHhCCcccccceEEEecC
Confidence 999999 4 99999999999999999998653 6789999999999999999999999999999
Q ss_pred c-----CCCcEEEEEEe
Q 010443 498 I-----GVASVIKICIV 509 (510)
Q Consensus 498 ~-----g~tn~ikI~~v 509 (510)
. |.||++|+..+
T Consensus 458 ~P~g~~G~TN~LkI~~V 474 (587)
T 2e28_A 458 VPVGETGSTNLMKVHVI 474 (587)
T ss_dssp SSCSSCCCCCEEEEEEC
T ss_pred cccCcCCCCceEEEEEE
Confidence 7 78999999765
No 9
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.6e-129 Score=1027.03 Aligned_cols=443 Identities=29% Similarity=0.402 Sum_probs=424.0
Q ss_pred CCCCeEEEEecCCCCCCHH--HHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCeeEeeec
Q 010443 18 RLPKTKIVCTLGPASRSVP--MLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFL 95 (510)
Q Consensus 18 ~~~~tkIi~TiGp~~~~~~--~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp~iR~g~~ 95 (510)
+.|||||||||||+|+++| +|++|+++ |||||||||||++++|+++++++|++++++|+|++|++||||||||+|.+
T Consensus 13 ~~r~TKIv~TiGPas~~~e~~~l~~li~a-mnv~RlNfSHg~~e~h~~~i~~iR~~~~~~g~~vaIl~Dl~GPkIR~g~~ 91 (461)
T 3qtg_A 13 ARNLTKRVATLGPSTDVLRPDELIKFLDL-VDGVRINLAHASPNEVKFRIEAVRSYEKAKNRPLAVIVDLKGPSIRVGST 91 (461)
T ss_dssp CSCSSEEEEECSHHHHTCCHHHHHHHHTT-CSEEEEETTTCCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCCBCCBC
T ss_pred ccCCceEEEeeCCCccCchHHHHHHHHHh-CCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCceEEEEeCCCCEEEECCC
Confidence 5699999999999999999 99999999 99999999999999999999999999999999999999999999999998
Q ss_pred CCCCcEEecCCCEEEEEecCCCCCCccEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEeeCeEecCC
Q 010443 96 KDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGER 175 (510)
Q Consensus 96 ~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~i~~~v~~~G~l~s~ 175 (510)
. +++|++|+.++|+.+.. .++ +.++++|++|++++++||.||+|||+|.|+|+++ +++.+.|+|.+||.|+++
T Consensus 92 ~---~v~L~~G~~~~lt~~~~-~~~-~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~--~~~~v~~~V~~gG~L~~~ 164 (461)
T 3qtg_A 92 S---PINVQEGEVVKFKLSDK-SDG-TYIPVPNKAFFSAVEQNDVILMLDGRLRLKVTNT--GSDWIEAVAESSGVITGG 164 (461)
T ss_dssp S---CEEECTTCEEEEEECSB-CCS-SSEEECCHHHHHHCCTTCEEEEGGGTEEEEEEEE--CSSEEEEEESSCEEECTT
T ss_pred C---CEEEeCCCEEEEEecCC-CCC-cEEEcchHHHHhhcCCCCEEEEeCCEEEEEEEEE--ECCEEEEEEEECCEecCC
Confidence 5 39999999999998753 344 7899999999999999999999999999999998 477899999999999999
Q ss_pred CCcccCCccccCCCCChhcHHHHHh--ccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHH
Q 010443 176 KNVNLPGVVVDLPTLTEKDKEDILR--WGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDI 253 (510)
Q Consensus 176 K~vnlp~~~~~lp~lt~~D~~di~~--~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI 253 (510)
||||+||..+++|.||++|++|| + |++++|+|+|++|||++++|++++|+++.+.|.++.|||||||++||+|+|+|
T Consensus 165 KgvNlPg~~~~lp~lTekD~~dl-~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeI 243 (461)
T 3qtg_A 165 KAIVVEGKDYDISTPAEEDVEAL-KAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEEL 243 (461)
T ss_dssp CBEEETTCCCCCCSSCHHHHHHH-HHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHH
T ss_pred CceecCCCCCCCCCCCHHHHHHH-HHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHH
Confidence 99999999999999999999999 9 99999999999999999999999999999999899999999999999999999
Q ss_pred HhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 254 LRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 254 ~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
++++|||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||++||+|||||++||+|||+||+||+|||+
T Consensus 244 l~~sDgImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavMLSg 323 (461)
T 3qtg_A 244 VQCSDYVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTN 323 (461)
T ss_dssp HHTCSEEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEECH
T ss_pred HHhcccEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEEcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHh
Q 010443 334 ESAAGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAK 413 (510)
Q Consensus 334 Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~T~sG~tA~~iSr 413 (510)
|||.|+||+|||++|++||+++|+...|. +.+.+..+++|.+|+++|++++|+ ||+||.||+||+++||
T Consensus 324 ETA~G~yPveaV~~m~~I~~~aE~~~~~~----------~~~~~~~~aia~aa~~~a~~~~a~-Iv~~T~SG~tA~~vsr 392 (461)
T 3qtg_A 324 ETASGKYPLAAVSWLSRILMNVEYQIPQS----------PLLQNSRDRFAKGLVELAQDLGAN-ILVFSMSGTLARRIAK 392 (461)
T ss_dssp HHHTSSCHHHHHHHHHHHHHTCCCCCCCC----------CCCCSHHHHHHHHHHHHHHHHTCE-EEEECSSSHHHHHHHT
T ss_pred cccCCCCHHHHHHHHHHHHHHHHhhhhhc----------cCCCCHHHHHHHHHHHHHHhcCCC-EEEECCCcHHHHHHHh
Confidence 99999999999999999999999986551 234578899999999999999999 9999999999999999
Q ss_pred hCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCCCCCCEEE
Q 010443 414 YRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVV 493 (510)
Q Consensus 414 ~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~v~~GD~VV 493 (510)
|||.|||||+ | ++++++|||+|+|||+|++++ . .+.|++++.|+++++++| ||
T Consensus 393 ~RP~~pIia~-------T------~~~~~~r~l~l~~GV~p~~~~-~------~~~d~~~~~a~~~~~~~g-------vv 445 (461)
T 3qtg_A 393 FRPRGVVYVG-------T------PNVRVARSLSIVWALEPLYIP-A------ENYEEGLEKLISLKGTTP-------FV 445 (461)
T ss_dssp TCCSSCEEEE-------E------SCHHHHHHHTTSTTEEEEECC-C------SSHHHHHHHHHHHHCCSS-------EE
T ss_pred hCCCCCEEEe-------C------CCHHHHhhceeccceEEEEeC-C------CCHHHHHHHHHHHHHHCC-------EE
Confidence 9999999999 4 999999999999999999987 3 678999999999999888 88
Q ss_pred EEeec-CCCcEEEEE
Q 010443 494 ALHRI-GVASVIKIC 507 (510)
Q Consensus 494 vv~g~-g~tn~ikI~ 507 (510)
+++|. |+||++||+
T Consensus 446 it~g~p~~TN~~~v~ 460 (461)
T 3qtg_A 446 ATYGIRGGVHSVKVK 460 (461)
T ss_dssp EEECCTTSCCEEEEE
T ss_pred EEeccCCCCeEEEEE
Confidence 89998 999999996
No 10
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=2.8e-129 Score=1041.30 Aligned_cols=478 Identities=41% Similarity=0.669 Sum_probs=450.7
Q ss_pred CCCCCeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcC-CcEEEEecCCCCeeEeeec
Q 010443 17 KRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQ-ILCAVMLDTKGPEIRTGFL 95 (510)
Q Consensus 17 ~~~~~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~-~~v~i~~Dl~Gp~iR~g~~ 95 (510)
.+.|||||||||||+|+++|.|++|+++||||||||||||++++|+++++++|++++++| +|++|++||||||||||.+
T Consensus 16 ~~~r~tkIv~TlGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~ir~~~~~~~~~~v~il~Dl~GPkiR~g~~ 95 (500)
T 1a3w_A 16 SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPLAIALDTKGPEIRTGTT 95 (500)
T ss_dssp CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHHHHHHHHHHHHHCCSSCCCCEEECCCSCCBBCCC
T ss_pred ccCCCcEEEEEcCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEeCCCCEEEEeec
Confidence 456999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CCCCcEEecCCCEEEEEecCC--CCCCccEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEeeCeEec
Q 010443 96 KDGKPIQLKEGQEITVSTDYD--FKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLG 173 (510)
Q Consensus 96 ~~~~~i~l~~G~~v~l~~~~~--~~~~~~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~i~~~v~~~G~l~ 173 (510)
.+++++.|++|+.++|+.+.. ..|+.+.+++||++|++++++||.||+|||+|.|+|++++ +++.+.|+|.+||.|+
T Consensus 96 ~~~~~v~l~~G~~~~lt~~~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~-~~~~v~~~v~~gG~L~ 174 (500)
T 1a3w_A 96 TNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQVLEVV-DDKTLKVKALNAGKIC 174 (500)
T ss_dssp SSSSCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEEETTTTEEEECCBCC-C--CEEEEBCSCCCCC
T ss_pred CCCCceEeecCCEEEEEeCCcccCCCCCcEEEechHHHHhhcCCCCEEEEeCCEEEEEEEEEc-cCCeEEEEEecCCEEe
Confidence 876579999999999998742 4688899999999999999999999999999999999883 3678999999999999
Q ss_pred CCCCcccCCccccCCCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHH
Q 010443 174 ERKNVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDI 253 (510)
Q Consensus 174 s~K~vnlp~~~~~lp~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI 253 (510)
++||||+||..+++|.||++|..|| +|+++.|+|+|++|||++++|++++++++.+.+.++.|||||||++|++|+++|
T Consensus 175 ~~KgvNlPg~~~~lp~lt~~D~~DI-~~~l~~g~d~I~lpfV~saeDv~~~~~~l~~~~~~i~IiakIEt~eav~nldeI 253 (500)
T 1a3w_A 175 SHKGVNLPGTDVDLPALSEKDKEDL-RFGVKNGVHMVFASFIRTANDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEI 253 (500)
T ss_dssp SSCBEECTTCCCCCCSSCHHHHHHH-HHHHHHTCSEEEECSCCSHHHHHHHHHHHHHHHTTSEEEEEECSSHHHHSHHHH
T ss_pred CCCCCcCCCCccCCCCCChhHHHHH-HHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCcEEEEEECChHHHHhHHHH
Confidence 9999999999999999999999999 999999999999999999999999999998888899999999999999999999
Q ss_pred HhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 254 LRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 254 ~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
++++|||||||||||+++|.++++.+|++|+.+|+++|||+|+||||||||+.+|.|||||++|++|++.+|+|++|||+
T Consensus 254 ~~~~DgImvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~ 333 (500)
T 1a3w_A 254 LKVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSG 333 (500)
T ss_dssp HHHSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBST
T ss_pred HHhCCEEEECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHh
Q 010443 334 ESAAGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAK 413 (510)
Q Consensus 334 Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~T~sG~tA~~iSr 413 (510)
||+.|+||+|||++|++||+++|+.++|...|.......+.+.+..+++|.+|+++|++++|++||+||.||+||+++||
T Consensus 334 eta~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~isr 413 (500)
T 1a3w_A 334 ETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMRNCTPKPTSTTETVAASAVAAVFEQKAKAIIVLSTSGTTPRLVSK 413 (500)
T ss_dssp TTTTCSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTSCCSSCCHHHHHHHHHHHHHHHHTCSCEEEECSSSHHHHHHHH
T ss_pred hhhcchhHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhccccccchHHHHHHHHHHHHHhcCCCEEEEECCCchHHHHHHh
Confidence 99999999999999999999999988887766654321222346789999999999999999999999999999999999
Q ss_pred hCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCCCCCCEEE
Q 010443 414 YRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVV 493 (510)
Q Consensus 414 ~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~v~~GD~VV 493 (510)
|||+|||||+ | ++++++|||+|+|||+|++++......|.++.+++++.|+++++++|++++||.||
T Consensus 414 ~RP~~pI~a~-------t------~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vv 480 (500)
T 1a3w_A 414 YRPNCPIILV-------T------RCPRAARFSHLYRGVFPFVFEKEPVSDWTDDVEARINFGIEKAKEFGILKKGDTYV 480 (500)
T ss_dssp TCCSSCEEEE-------E------SCTTHHHHGGGSTTEEEEECCSCCCSCTTTHHHHHHHHHHHHHHHTTCSCTTCEEE
T ss_pred hCCCCCEEEE-------c------CCHHHHHhhhhhCCeEEEEecccccccccCCHHHHHHHHHHHHHHCCCCCCcCEEE
Confidence 9999999999 4 89999999999999999999875556777889999999999999999999999999
Q ss_pred EEeec----CCCcEEEEEEe
Q 010443 494 ALHRI----GVASVIKICIV 509 (510)
Q Consensus 494 vv~g~----g~tn~ikI~~v 509 (510)
+++|+ |+||++||+.+
T Consensus 481 v~~g~~~~~g~tn~~~v~~v 500 (500)
T 1a3w_A 481 SIQGFKAGAGHSNTLQVSTV 500 (500)
T ss_dssp EEECCCTTTCCCCEEEEEEC
T ss_pred EEecccCCCCCCceEEEEEC
Confidence 99997 89999999875
No 11
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.75 E-value=5.9e-19 Score=181.62 Aligned_cols=147 Identities=12% Similarity=0.124 Sum_probs=127.1
Q ss_pred HHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccC--------------------------------CCCceEEEEecC
Q 010443 196 EDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPH--------------------------------AKNIQLMSKVEN 243 (510)
Q Consensus 196 ~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~--------------------------------~~~~~IiakIEt 243 (510)
.+| +++++.|+++|++|||++++|++++++.++.. +.++.|++||||
T Consensus 108 ~di-~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt 186 (339)
T 1izc_A 108 VSL-STALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIES 186 (339)
T ss_dssp HHH-HHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECS
T ss_pred HHH-HHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEECh
Confidence 477 77889999999999999999999999988531 124779999999
Q ss_pred HHHHhchHHHHhh--cCeeEEeCCcccCC--------CCc---hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCC
Q 010443 244 QEGVVNFDDILRE--TDSFMVARGDLGME--------IPV---EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRP 310 (510)
Q Consensus 244 ~~av~nldeI~~~--~DgI~IgrgDLg~e--------~~~---~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~P 310 (510)
++|++|+++|+++ .|+++||++||+.+ +|. +.+..++++++.+|+++|||++..+ ..|
T Consensus 187 ~~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~---------~d~ 257 (339)
T 1izc_A 187 VKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGA---------LSV 257 (339)
T ss_dssp HHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEEC---------SSG
T ss_pred HHHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEec---------CCH
Confidence 9999999999975 79999999999999 886 7899999999999999999997643 122
Q ss_pred ChHhHHHHHHHHHcCCceEEeccCCCC--CCCHHHHHHHHHHHHHHHhcc
Q 010443 311 TRAEATDVANAVLDGTDCVMLSGESAA--GAYPEIAVKIMRRICIEAESS 358 (510)
Q Consensus 311 traEv~Dv~~av~~G~D~imLs~Eta~--G~yP~~~V~~m~~i~~~aE~~ 358 (510)
.++.+++.+|+|+++++.++.. +.| .+.|+++++|+.++|+.
T Consensus 258 -----~~a~~~~~~Gf~~l~~~~di~~l~~~~-~~~v~~a~~iv~a~e~~ 301 (339)
T 1izc_A 258 -----DMVPSLIEQGYRAIAVQFDVWGLSRLV-HGSLAQARASAKQFAGQ 301 (339)
T ss_dssp -----GGHHHHHHTTEEEEEEEEHHHHHHHHH-HHHHHHHHHHHGGGCC-
T ss_pred -----HHHHHHHHhCCCEEEecHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 5778899999999999998876 666 78999999999988875
No 12
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.67 E-value=2e-18 Score=172.35 Aligned_cols=126 Identities=16% Similarity=0.192 Sum_probs=106.3
Q ss_pred HHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccC---------------------------CCCceEEEEecCHHHH
Q 010443 195 KEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPH---------------------------AKNIQLMSKVENQEGV 247 (510)
Q Consensus 195 ~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~---------------------------~~~~~IiakIEt~~av 247 (510)
..+| +++++.|+++|++|||+|++|++++.+.++.. +.++.+++||||++|+
T Consensus 80 ~~~i-~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av 158 (267)
T 2vws_A 80 KPLI-KQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTAL 158 (267)
T ss_dssp HHHH-HHHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHH
T ss_pred HHHH-HHHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHH
Confidence 3577 77889999999999999999999998876410 1247899999999999
Q ss_pred hchHHHHhh--cCeeEEeCCcccCCCCc------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHH
Q 010443 248 VNFDDILRE--TDSFMVARGDLGMEIPV------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVA 319 (510)
Q Consensus 248 ~nldeI~~~--~DgI~IgrgDLg~e~~~------~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~ 319 (510)
+|+++|+++ .|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ . .| ....
T Consensus 159 ~~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~~-------~--d~-----~~a~ 224 (267)
T 2vws_A 159 DNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLA-------V--AP-----DMAQ 224 (267)
T ss_dssp HTHHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEEC-------S--SH-----HHHH
T ss_pred HHHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEec-------C--CH-----HHHH
Confidence 999999987 89999999999999986 6799999999999999999998731 1 12 2446
Q ss_pred HHHHcCCceEEeccCC
Q 010443 320 NAVLDGTDCVMLSGES 335 (510)
Q Consensus 320 ~av~~G~D~imLs~Et 335 (510)
..+.+|++.+..+.++
T Consensus 225 ~~~~~G~~~~s~~~d~ 240 (267)
T 2vws_A 225 QCLAWGANFVAVGVDT 240 (267)
T ss_dssp HHHHTTCCEEEEEEHH
T ss_pred HHHHCCCCEEEEchHH
Confidence 6788999999998764
No 13
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.66 E-value=5.9e-17 Score=163.30 Aligned_cols=127 Identities=13% Similarity=0.165 Sum_probs=106.3
Q ss_pred cHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhcc-----CC----------------------CCceEEEEecCHHH
Q 010443 194 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGP-----HA----------------------KNIQLMSKVENQEG 246 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~-----~~----------------------~~~~IiakIEt~~a 246 (510)
|..+| +++++.|+++|++|||+|++|++++.+.++. +| .++.+++||||++|
T Consensus 100 d~~di-~~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~a 178 (287)
T 2v5j_A 100 DPVQI-KQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREA 178 (287)
T ss_dssp CHHHH-HHHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHH
T ss_pred CHHHH-HHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHH
Confidence 34478 7889999999999999999999999887641 11 24789999999999
Q ss_pred HhchHHHHhh--cCeeEEeCCcccCCCCc------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHH
Q 010443 247 VVNFDDILRE--TDSFMVARGDLGMEIPV------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDV 318 (510)
Q Consensus 247 v~nldeI~~~--~DgI~IgrgDLg~e~~~------~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv 318 (510)
++|+++|+++ .|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ ..| ...
T Consensus 179 v~n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~~---------~d~-----~~a 244 (287)
T 2v5j_A 179 MKNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILI---------ANE-----QLA 244 (287)
T ss_dssp HHTHHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEEC---------CCH-----HHH
T ss_pred HHHHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEec---------CCH-----HHH
Confidence 9999999985 79999999999999986 6799999999999999999997621 122 244
Q ss_pred HHHHHcCCceEEeccCC
Q 010443 319 ANAVLDGTDCVMLSGES 335 (510)
Q Consensus 319 ~~av~~G~D~imLs~Et 335 (510)
...+..|++.+..+.++
T Consensus 245 ~~~~~~G~~~~s~~~d~ 261 (287)
T 2v5j_A 245 KRYLELGALFVAVGVDT 261 (287)
T ss_dssp HHHHHTTCSEEEEEEHH
T ss_pred HHHHHhCCCEEEECcHH
Confidence 66788999999998764
No 14
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.63 E-value=2.9e-16 Score=156.28 Aligned_cols=126 Identities=15% Similarity=0.199 Sum_probs=107.3
Q ss_pred HHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhcc---------------------------CCCCceEEEEecCHHHHh
Q 010443 196 EDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGP---------------------------HAKNIQLMSKVENQEGVV 248 (510)
Q Consensus 196 ~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~---------------------------~~~~~~IiakIEt~~av~ 248 (510)
.|| +++++.|+|+|++|||+|++|++++.+.++. .+.++.++++|||++|+.
T Consensus 79 ~di-~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~ 157 (261)
T 3qz6_A 79 AHV-QRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVE 157 (261)
T ss_dssp HHH-HHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHH
T ss_pred HHH-HHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHH
Confidence 478 7889999999999999999999999988742 124689999999999999
Q ss_pred chHHHHhh--cCeeEEeCCcccCCCCc------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH
Q 010443 249 NFDDILRE--TDSFMVARGDLGMEIPV------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN 320 (510)
Q Consensus 249 nldeI~~~--~DgI~IgrgDLg~e~~~------~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~ 320 (510)
|+++|+++ .|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ ..|..++ ..
T Consensus 158 ~~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~---------~~~~~~~----~~ 224 (261)
T 3qz6_A 158 DIDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFT---------AADAAKM----GW 224 (261)
T ss_dssp THHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEE---------SSCGGGG----HH
T ss_pred HHHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe---------CCHHHHH----HH
Confidence 99999964 79999999999999986 4799999999999999999998753 2344432 45
Q ss_pred HHHcCCceEEeccCC
Q 010443 321 AVLDGTDCVMLSGES 335 (510)
Q Consensus 321 av~~G~D~imLs~Et 335 (510)
.+..|++.+.++.++
T Consensus 225 ~~~~G~~~~s~~~D~ 239 (261)
T 3qz6_A 225 AVERGAQMLLWSGDV 239 (261)
T ss_dssp HHHTTCCEEEEEEHH
T ss_pred HHHCCCCEEEEhhHH
Confidence 578999999999885
No 15
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.63 E-value=5.4e-16 Score=153.75 Aligned_cols=126 Identities=20% Similarity=0.228 Sum_probs=106.8
Q ss_pred HHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhcc--------------------------CCCCceEEEEecCHHHHh
Q 010443 195 KEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGP--------------------------HAKNIQLMSKVENQEGVV 248 (510)
Q Consensus 195 ~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~--------------------------~~~~~~IiakIEt~~av~ 248 (510)
...| +.+++.|+++|++|||++++|++.+.+.++. .+.++.++++|||++|++
T Consensus 81 ~~~i-~~~l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~ 159 (256)
T 1dxe_A 81 PVII-KRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVD 159 (256)
T ss_dssp HHHH-HHHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHH
T ss_pred HHHH-HHHHhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHH
Confidence 3447 7788999999999999999999999998851 134688999999999999
Q ss_pred chHHHHhh--cCeeEEeCCcccCCCCc------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH
Q 010443 249 NFDDILRE--TDSFMVARGDLGMEIPV------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN 320 (510)
Q Consensus 249 nldeI~~~--~DgI~IgrgDLg~e~~~------~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~ 320 (510)
|+++|+++ .|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ .+ -.+...
T Consensus 160 ~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~~-----------~d---~~~~~~ 225 (256)
T 1dxe_A 160 NVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILA-----------PV---EADARR 225 (256)
T ss_dssp THHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEEC-----------CS---HHHHHH
T ss_pred hHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEec-----------CC---HHHHHH
Confidence 99999984 79999999999999986 5799999999999999999998622 11 224466
Q ss_pred HHHcCCceEEeccCC
Q 010443 321 AVLDGTDCVMLSGES 335 (510)
Q Consensus 321 av~~G~D~imLs~Et 335 (510)
.+..|++.+..+.++
T Consensus 226 ~~~~G~~~~s~~~d~ 240 (256)
T 1dxe_A 226 YLEWGATFVAVGSDL 240 (256)
T ss_dssp HHHTTCCEEEEEEHH
T ss_pred HHHcCCCEEEechHH
Confidence 789999999998764
No 16
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=99.58 E-value=3.8e-15 Score=149.76 Aligned_cols=132 Identities=13% Similarity=0.192 Sum_probs=108.0
Q ss_pred hhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHh--hcCeeEEeCCcccC
Q 010443 192 EKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR--ETDSFMVARGDLGM 269 (510)
Q Consensus 192 ~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~--~~DgI~IgrgDLg~ 269 (510)
+++..|| +++++ |+++|++|||++++|++.+++.+...|.++.++++|||++|+.|+++|++ ..|++++|++||+.
T Consensus 81 ~~~~~dl-~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~~ 158 (284)
T 1sgj_A 81 PYFEDDL-SVLTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGAEDYTT 158 (284)
T ss_dssp TTHHHHG-GGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHHH
T ss_pred HhHHHHH-HHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHHHHHHHHcCCCCcEEEECHHHHHH
Confidence 6688899 88999 99999999999999999999999766668999999999999999999997 37999999999999
Q ss_pred CCCc------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEe
Q 010443 270 EIPV------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 331 (510)
Q Consensus 270 e~~~------~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imL 331 (510)
+++. +.+..++++++.+|+++|||++.. +.....-...-..+...+...|+||=+.
T Consensus 159 ~lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~i~~------v~~~~~d~~~l~~~~~~~~~~Gf~Gk~~ 220 (284)
T 1sgj_A 159 DLGGKRTPGGLEVLYARSQVALAARLTGVAALDI------VVTALNDPETFRADAEQGRALGYSGKLC 220 (284)
T ss_dssp HHTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEEC------CCCCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HhCCCCCCChHHHHHHHHHHHHHHHHcCCCeeeC------CcCCCCCHHHHHHHHHHHHhCCCCcccc
Confidence 9987 679999999999999999998531 0000000011114566788899986554
No 17
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=99.37 E-value=9.4e-13 Score=134.68 Aligned_cols=136 Identities=19% Similarity=0.173 Sum_probs=111.7
Q ss_pred CCCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhcc-----------CCCCceEEEEecCHHHHhchHHHHh
Q 010443 187 LPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGP-----------HAKNIQLMSKVENQEGVVNFDDILR 255 (510)
Q Consensus 187 lp~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~-----------~~~~~~IiakIEt~~av~nldeI~~ 255 (510)
-|.+...|.+.| ..+++.|.+.|++|||++++|++.+++++.. .+.++.++++|||+.|+.|+++|++
T Consensus 117 ~p~~~~~ql~Ai-~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~ 195 (324)
T 2xz9_A 117 RPDIFKTQLRAI-LRASAYGNVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAK 195 (324)
T ss_dssp CHHHHHHHHHHH-HHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTT
T ss_pred chhhHHHHHHHH-HHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHH
Confidence 356677788888 7888899999999999999999988887741 2346899999999999999999999
Q ss_pred hcCeeEEeCCcccCC-CC---------------chhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHH
Q 010443 256 ETDSFMVARGDLGME-IP---------------VEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVA 319 (510)
Q Consensus 256 ~~DgI~IgrgDLg~e-~~---------------~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~ 319 (510)
+.|+++||..||+.. ++ .+.|..+.++++.+|+++|||+++++++- . .| ..+.
T Consensus 196 ~vD~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~~----~--dp-----~~~~ 264 (324)
T 2xz9_A 196 EVDFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEMA----G--DP-----LAAV 264 (324)
T ss_dssp TCSEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGG----G--CH-----HHHH
T ss_pred hCcEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCccC----C--CH-----HHHH
Confidence 999999999999953 33 25788899999999999999999987742 1 12 3446
Q ss_pred HHHHcCCceEEeccC
Q 010443 320 NAVLDGTDCVMLSGE 334 (510)
Q Consensus 320 ~av~~G~D~imLs~E 334 (510)
..+..|+|.+..+..
T Consensus 265 ~l~~lG~~~~si~p~ 279 (324)
T 2xz9_A 265 ILLGLGLDEFSMSAT 279 (324)
T ss_dssp HHHHHTCCEEEECGG
T ss_pred HHHHCCCCEEEEChh
Confidence 678899999776644
No 18
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=99.27 E-value=1.2e-11 Score=126.05 Aligned_cols=139 Identities=15% Similarity=0.207 Sum_probs=106.4
Q ss_pred ccCCCCC-hhcHHHHHhccCcCCC--CEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh---cC
Q 010443 185 VDLPTLT-EKDKEDILRWGVPNNI--DMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE---TD 258 (510)
Q Consensus 185 ~~lp~lt-~~D~~di~~~a~~~g~--d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~---~D 258 (510)
++++.+. +....|| +..++.|. ++|++|+|++++|++.+.+.+...+.++.++++|||++|+.|+++|++. .|
T Consensus 106 VRVn~~~t~~~~~Dl-~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~ 184 (316)
T 3qll_A 106 LRINGLDTRAGIEDI-HALLECGSLPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPKLA 184 (316)
T ss_dssp EECCCTTSHHHHHHH-HHHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC--CCEEEEEECSHHHHHTHHHHHTSCTTEE
T ss_pred EEECCCCCchhHHHH-HHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCCce
Confidence 4444443 5556677 66677774 9999999999999999999998777789999999999999999999983 58
Q ss_pred eeEEeCCcccCCCCc----hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCCh-HhHHHHHHHHHcCCceEEe
Q 010443 259 SFMVARGDLGMEIPV----EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTR-AEATDVANAVLDGTDCVML 331 (510)
Q Consensus 259 gI~IgrgDLg~e~~~----~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~Ptr-aEv~Dv~~av~~G~D~imL 331 (510)
++++|..||..++|. +.+..+..+++.+|+++|++++. +- ....-.. .-..+...+...|++|=+.
T Consensus 185 ~l~~G~~DL~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~id-~v------~~~~~D~~gl~~e~~~~r~lGf~Gk~~ 255 (316)
T 3qll_A 185 GLIFGAADMAADIGAASTWEPLALARARLVSACAMNGIPAID-AP------FFDVHDVSGLQSETLRASDFGFSAKAA 255 (316)
T ss_dssp EEEECHHHHHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCEEE-CC------CSCSSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEEECHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCceee-cc------ccCcCCHHHHHHHHHHHHHCCCCeEEe
Confidence 999999999999886 46778889999999999999853 11 0011111 1135667788899987544
No 19
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=99.17 E-value=5.9e-11 Score=118.64 Aligned_cols=124 Identities=13% Similarity=0.126 Sum_probs=96.9
Q ss_pred hhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh--cCeeEEeCCcccC
Q 010443 192 EKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE--TDSFMVARGDLGM 269 (510)
Q Consensus 192 ~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~--~DgI~IgrgDLg~ 269 (510)
+.-..|| +..++.|+++|.+|+|+++++++.+. ++.++++|||++|+.|+++|+.. .|++++|+.||+.
T Consensus 71 ~~~~~dl-~~~~~~g~~gi~lPKv~s~~~v~~~~--------~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl~~ 141 (273)
T 1u5h_A 71 ADQARDL-EALAGTAYTTVMLPKAESAAQVIELA--------PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIA 141 (273)
T ss_dssp HHHHHHH-HHHHTSCCCEEEETTCCCHHHHHTTT--------TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHH
T ss_pred hHHHHHH-HHHHhcCCCEEEeCCCCCHHHHHHHh--------hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHHHH
Confidence 3445677 66788999999999999999999763 68899999999999999999964 4899999999999
Q ss_pred CCCch-----------hHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHh-HHHHHHHHHcCCceEEe
Q 010443 270 EIPVE-----------KIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAE-ATDVANAVLDGTDCVML 331 (510)
Q Consensus 270 e~~~~-----------~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraE-v~Dv~~av~~G~D~imL 331 (510)
++|.. .+..+..+++.+|+++|++++.. - .....+.+- ..+...+...|+||-+.
T Consensus 142 ~lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid~-v------~~~~~d~~gl~~~~~~~~~~Gf~Gk~~ 208 (273)
T 1u5h_A 142 TLGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALDA-V------HLDILDVEGLQEEARDAAAVGFDVTVC 208 (273)
T ss_dssp HHTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEEC-C------CSCTTCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HhCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCcccC-C------cCCCCCHHHHHHHHHHHHhCCCCceee
Confidence 98752 37788899999999999988631 1 111111111 14667788899998766
No 20
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=99.14 E-value=5.6e-11 Score=134.67 Aligned_cols=134 Identities=19% Similarity=0.190 Sum_probs=111.5
Q ss_pred CChhcHHHHHhccCc-CC--CCEEEEcCCCCHHHHHHHHHHhccCC----CC-ceEEEEecCHHHHhchHHHHhhcCeeE
Q 010443 190 LTEKDKEDILRWGVP-NN--IDMIALSFVRKGSDLVNVRKVLGPHA----KN-IQLMSKVENQEGVVNFDDILRETDSFM 261 (510)
Q Consensus 190 lt~~D~~di~~~a~~-~g--~d~I~~sfV~sa~dv~~vr~~l~~~~----~~-~~IiakIEt~~av~nldeI~~~~DgI~ 261 (510)
+.+.+.+.| ..+.+ .| .+.|++|||+++++++.+++.++..| .+ +.++++|||++|+.|+|+|++..|+++
T Consensus 622 ~~~~ql~Ai-~ra~~~~G~~~~~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~s 700 (794)
T 2ols_A 622 CFALECKAL-KRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFS 700 (794)
T ss_dssp HHHHHHHHH-HHHHHTSCCTTEEEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEE
T ss_pred HHHHHHHHH-HHHHHhcCCCCceEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEE
Confidence 445677788 56777 68 78999999999999999999987554 23 889999999999999999999999999
Q ss_pred EeCCcccCC-CCc---------------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcC
Q 010443 262 VARGDLGME-IPV---------------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDG 325 (510)
Q Consensus 262 IgrgDLg~e-~~~---------------~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G 325 (510)
||..||+.. ++. +.|..+.++++.+|+++|||++++.++-- + -| ..+..++..|
T Consensus 701 iGtnDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgicGe~~~---~--dp-----~~~~~~~~~G 770 (794)
T 2ols_A 701 IGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGICGQGPS---D--HP-----DFAKWLVEEG 770 (794)
T ss_dssp EEHHHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEEESSHHH---H--CH-----HHHHHHHHHT
T ss_pred ECHHHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEEecccCC---C--CH-----HHHHHHHHCC
Confidence 999999987 674 46889999999999999999999887631 0 01 2246678899
Q ss_pred CceEEeccC
Q 010443 326 TDCVMLSGE 334 (510)
Q Consensus 326 ~D~imLs~E 334 (510)
+|.+.++..
T Consensus 771 ~~~~s~~p~ 779 (794)
T 2ols_A 771 IESVSLNPD 779 (794)
T ss_dssp CCEEEECGG
T ss_pred CCEEEECHh
Confidence 999998744
No 21
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=99.10 E-value=1.2e-10 Score=119.54 Aligned_cols=120 Identities=12% Similarity=0.019 Sum_probs=92.2
Q ss_pred CCCCEEEEcCCCCHHHHHHHHHHhccC----C--CCceEEEEecCHHHHhchHHHHhh--cCeeEEeCCcccCCCCc---
Q 010443 205 NNIDMIALSFVRKGSDLVNVRKVLGPH----A--KNIQLMSKVENQEGVVNFDDILRE--TDSFMVARGDLGMEIPV--- 273 (510)
Q Consensus 205 ~g~d~I~~sfV~sa~dv~~vr~~l~~~----~--~~~~IiakIEt~~av~nldeI~~~--~DgI~IgrgDLg~e~~~--- 273 (510)
.|+|+|++|+|++++|++.+.+++... | ..+.++++|||++|+.|+++|++. .|++++|..||..+++.
T Consensus 110 ~g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa~~rv~~L~~G~~DL~~~lg~~~~ 189 (332)
T 3qqw_A 110 GRLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAELPNIEVLDFGLMDFVSGHHGAIP 189 (332)
T ss_dssp TCCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTTSTTEEEEEECHHHHHHTTTTCSC
T ss_pred cCCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhcCcCCCEEEEcHHHHHHHhCCCcc
Confidence 499999999999999999998887532 2 468899999999999999999954 58999999999988864
Q ss_pred ------------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHh-HHHHHHHH-HcCCceEEe
Q 010443 274 ------------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAE-ATDVANAV-LDGTDCVML 331 (510)
Q Consensus 274 ------------~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraE-v~Dv~~av-~~G~D~imL 331 (510)
+.+..++.+++.+|+++|+++|.. - ..-....+- ..+...+. ..|+||-+.
T Consensus 190 ~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~id~-v------~~d~~D~~gl~~~~~~~~~~lGf~Gk~~ 254 (332)
T 3qqw_A 190 AAAMRSPGQFEHALLVRAKADMVAAALANGIVPAHN-V------CLNLKDAEVIASDACRARNEFGFLRMWS 254 (332)
T ss_dssp GGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEEEEC-C------CSCSSCHHHHHHHHHHHHHHHCCCEEEE
T ss_pred ccccCCCCcccCHHHHHHHHHHHHHHHHhCCCcccC-C------cccccCHHHHHHHHHHHHHhCCCCcccc
Confidence 126778889999999999998541 1 111111111 14556677 789997555
No 22
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=99.06 E-value=3.8e-10 Score=123.31 Aligned_cols=135 Identities=15% Similarity=0.102 Sum_probs=110.0
Q ss_pred CCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhc-------cCC----CCceEEEEecCHHHHhchHHHHhh
Q 010443 188 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLG-------PHA----KNIQLMSKVENQEGVVNFDDILRE 256 (510)
Q Consensus 188 p~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~-------~~~----~~~~IiakIEt~~av~nldeI~~~ 256 (510)
|.+...+.+.| ..+.+.|...|++|||+++++++.+++++. +.| .++.+.++||++.|+.++++|++.
T Consensus 367 p~if~~QlrAi-~rA~~~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~ 445 (575)
T 2hwg_A 367 REILRDQLRAI-LRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKE 445 (575)
T ss_dssp HHHHHHHHHHH-HHHTTSSCEEEEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTT
T ss_pred hHHHHHHHHHH-HHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHh
Confidence 44455566788 678889999999999999999999888774 122 368999999999999999999999
Q ss_pred cCeeEEeCCcccC----------CCCc------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH
Q 010443 257 TDSFMVARGDLGM----------EIPV------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN 320 (510)
Q Consensus 257 ~DgI~IgrgDLg~----------e~~~------~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~ 320 (510)
+|++.||..||+. .++. +.|..+.++++.+|+++|||++++.++- ..|. .+..
T Consensus 446 vDf~siGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgvCGe~a------gdp~-----~~~~ 514 (575)
T 2hwg_A 446 VDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELA------GDER-----ATLL 514 (575)
T ss_dssp CSEEEECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEECSTTT------TCTT-----THHH
T ss_pred CCEEEECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCCC------CCHH-----HHHH
Confidence 9999999999998 5442 5788899999999999999999987622 2332 2356
Q ss_pred HHHcCCceEEeccC
Q 010443 321 AVLDGTDCVMLSGE 334 (510)
Q Consensus 321 av~~G~D~imLs~E 334 (510)
.+..|+|.+..+..
T Consensus 515 l~~lG~~~~S~~p~ 528 (575)
T 2hwg_A 515 LLGMGLDEFSMSAI 528 (575)
T ss_dssp HHHTTCCEEEECGG
T ss_pred HHHCCCCEEEECcc
Confidence 78899999877744
No 23
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=99.04 E-value=3.1e-10 Score=123.90 Aligned_cols=133 Identities=17% Similarity=0.081 Sum_probs=107.4
Q ss_pred CCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhc-----------cCCCCceEEEEecCHHHHhchHHHHhhc
Q 010443 189 TLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLG-----------PHAKNIQLMSKVENQEGVVNFDDILRET 257 (510)
Q Consensus 189 ~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~-----------~~~~~~~IiakIEt~~av~nldeI~~~~ 257 (510)
.+...+.+.| ..+.+.|...|++|||+++++++.+++++. ..+.++.+.++||++.|+.++|+|++.+
T Consensus 370 ~if~~QlrAi-~rA~~~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~v 448 (572)
T 2wqd_A 370 DIFRPQLRAL-LRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEV 448 (572)
T ss_dssp HHHHHHHHHH-HHHTTTSCEEEEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHHC
T ss_pred HHHHHHHHHH-HHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHHHHHHHhC
Confidence 3344555778 678889999999999999999999888763 1234689999999999999999999999
Q ss_pred CeeEEeCCcccCC-CC---------------chhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHH
Q 010443 258 DSFMVARGDLGME-IP---------------VEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANA 321 (510)
Q Consensus 258 DgI~IgrgDLg~e-~~---------------~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~a 321 (510)
|+++||..||+.. ++ .+.|..+.++++.+|+++|||++++.++- ..|.-+ ...
T Consensus 449 Df~siGtNDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgiCGe~a------gdp~~~-----~~l 517 (572)
T 2wqd_A 449 DFFSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEMA------GDETAI-----PLL 517 (572)
T ss_dssp SEEEECHHHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGG------GCTTTH-----HHH
T ss_pred CEEEECHHHHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCcc------CCHHHH-----HHH
Confidence 9999999999832 11 25788899999999999999999987733 234333 567
Q ss_pred HHcCCceEEecc
Q 010443 322 VLDGTDCVMLSG 333 (510)
Q Consensus 322 v~~G~D~imLs~ 333 (510)
+..|+|.+..+.
T Consensus 518 ~~lG~~~~S~~p 529 (572)
T 2wqd_A 518 LGLGLDEFSMSA 529 (572)
T ss_dssp HHHTCCEEEECH
T ss_pred HHCCCCEEEecc
Confidence 889999998773
No 24
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=99.03 E-value=3.4e-10 Score=116.49 Aligned_cols=120 Identities=14% Similarity=0.071 Sum_probs=89.1
Q ss_pred CCCCEEEEcCCCCHHHHHHHHHHhccC----C--CCceEEEEecCHHHHhchHHHHhh--cCeeEEeCCcccCCCCc---
Q 010443 205 NNIDMIALSFVRKGSDLVNVRKVLGPH----A--KNIQLMSKVENQEGVVNFDDILRE--TDSFMVARGDLGMEIPV--- 273 (510)
Q Consensus 205 ~g~d~I~~sfV~sa~dv~~vr~~l~~~----~--~~~~IiakIEt~~av~nldeI~~~--~DgI~IgrgDLg~e~~~--- 273 (510)
.|+|+|++|+|++++|++.+.+++... | ..+.++++|||++|+.|+++|++. .|++++|..||..+++.
T Consensus 109 ~g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa~~rv~~L~~G~~DL~~~lg~~~~ 188 (339)
T 3r4i_A 109 RAPAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAALPGVEALSFGLMDFVSAHDGAIP 188 (339)
T ss_dssp SCCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHTCTTEEEEEECHHHHHHTTTTSSC
T ss_pred CCCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHcCcCCCEEEECHHHHHHHhCCCcC
Confidence 489999999999999999998887532 2 368899999999999999999953 58999999999988864
Q ss_pred ------------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChH-hHHHHHHHH-HcCCceEEe
Q 010443 274 ------------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRA-EATDVANAV-LDGTDCVML 331 (510)
Q Consensus 274 ------------~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~Ptra-Ev~Dv~~av-~~G~D~imL 331 (510)
+.+..++.+++.+|+++|++++.. - ....-..+ -..+...+. ..|+||=+.
T Consensus 189 ~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~id~-v------~~d~~D~~gl~~~~~~~~~~lGf~Gk~~ 253 (339)
T 3r4i_A 189 DTAMRSPGQFDHPLVRRAKLEISAACHAYGKVPSHN-V------STEVRDMSVVANDAARARNEFGYTRMWS 253 (339)
T ss_dssp GGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEEEEC-C------CCCSSCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred ccccCCCccccCHHHHHHHHHHHHHHHHcCCCCccC-C------CcCCCChHHHHHHHHHHHHhCCCCccee
Confidence 125678889999999999998541 0 11111111 113445564 689997554
No 25
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=98.88 E-value=3.4e-09 Score=111.06 Aligned_cols=133 Identities=9% Similarity=-0.008 Sum_probs=101.7
Q ss_pred Chh-cHHHHHhccCc------CCCCEEEEcCCCCHHHHHHHHHHhcc----CC---CCceEEEEecCHHH---HhchHHH
Q 010443 191 TEK-DKEDILRWGVP------NNIDMIALSFVRKGSDLVNVRKVLGP----HA---KNIQLMSKVENQEG---VVNFDDI 253 (510)
Q Consensus 191 t~~-D~~di~~~a~~------~g~d~I~~sfV~sa~dv~~vr~~l~~----~~---~~~~IiakIEt~~a---v~nldeI 253 (510)
|+. ...|| ...+. .++|+|.+|+|++++++..+.+.+.. .| ..+.++++|||++| +.|+++|
T Consensus 94 T~~~~~~DL-~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~eI 172 (433)
T 3oyz_A 94 TRYQGFQHM-LDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDE 172 (433)
T ss_dssp HHHHHHHHH-HHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHHH
T ss_pred ChhccHHHH-HHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHHH
Confidence 344 56677 55555 68999999999999999999888753 22 26889999999999 9999999
Q ss_pred Hhhc-------CeeEEeCCcccCCCCch-------hHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChH-hHHHH
Q 010443 254 LRET-------DSFMVARGDLGMEIPVE-------KIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRA-EATDV 318 (510)
Q Consensus 254 ~~~~-------DgI~IgrgDLg~e~~~~-------~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~Ptra-Ev~Dv 318 (510)
+.++ +|+++|+.||..++|.. .+..+..+++.+|+++|++++.. - ....-..+ =..+.
T Consensus 173 Aaasr~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aIDg-V------~~di~D~egL~~ea 245 (433)
T 3oyz_A 173 MGKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVDG-P------YDDIRDVEGYRERM 245 (433)
T ss_dssp HHCTTCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEEC-C------CCCTTCHHHHHHHH
T ss_pred HhhhccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcccc-c------ccCCCCHHHHHHHH
Confidence 9863 69999999999998763 47788899999999999987641 1 11111111 12467
Q ss_pred HHHHHcCCceEEe
Q 010443 319 ANAVLDGTDCVML 331 (510)
Q Consensus 319 ~~av~~G~D~imL 331 (510)
..+...|++|-+.
T Consensus 246 ~~ar~lGF~GK~~ 258 (433)
T 3oyz_A 246 TDNQAKGMLGIWS 258 (433)
T ss_dssp HHHHTTTCCEEEE
T ss_pred HHHHhCCCCceEe
Confidence 7788999998765
No 26
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=98.51 E-value=3e-06 Score=91.33 Aligned_cols=247 Identities=17% Similarity=0.187 Sum_probs=146.7
Q ss_pred cccCCCCCCCCCeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCe
Q 010443 10 LRDVPNDKRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPE 89 (510)
Q Consensus 10 ~~~~p~~~~~~~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp~ 89 (510)
..++|.+.+.||+-|. ||.+. +++.+.+.+|++++=++|--+....|+.+++--.....-+...+.. -+
T Consensus 79 va~~p~~l~~rRs~L~---~P~~r--km~~kAl~sgAD~vi~DlEDaVap~~k~~~~ar~~l~~al~~~~~~-~~----- 147 (532)
T 3cuz_A 79 IRGIPADLEDRRVEIT---GPVER--KMVINALNANVKVFMADFEDSLAPDWNKVIDGQINLRDAVNGTISY-TN----- 147 (532)
T ss_dssp CSCCCGGGSCCSEEEE---EECCH--HHHHHHHTSSSSEEEEESSTTCCCCHHHHHHHHHHHHHHHTTCCEE-EC-----
T ss_pred cCCCChhhhhceeEEE---ccCCH--HHHHHHHhcCCCEEEEcCccCCCccccchHHHHHHHHHHHhccCcc-cC-----
Confidence 3578899988999885 68865 8999999999999999999988766666444333322212111100 00
Q ss_pred eEeeecCCCCcEEecCCCEEEEEecCCCCCCccEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEeeC
Q 010443 90 IRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENT 169 (510)
Q Consensus 90 iR~g~~~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~i~~~v~~~ 169 (510)
.+++.+.|++|-.+.|.-.. .. +.-..-|. ++
T Consensus 148 ------~~G~~~~l~~~~~~l~vR~~--------------g~--------------~~~e~~VR-iN------------- 179 (532)
T 3cuz_A 148 ------EAGKIYQLKPNPAVLICRVR--------------GL--------------HLPEKHVT-WR------------- 179 (532)
T ss_dssp ------TTSCEEECCSSCCEEEEECC--------------CT--------------TCEEEEEE-ET-------------
T ss_pred ------CCCceeeccCCcceeeeecC--------------CC--------------CCCeeEEE-EC-------------
Confidence 01122333222222222110 00 00001111 11
Q ss_pred eEecCCCCcccCCccccCCCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhcc----CC---CCceEEEEec
Q 010443 170 AMLGERKNVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGP----HA---KNIQLMSKVE 242 (510)
Q Consensus 170 G~l~s~K~vnlp~~~~~lp~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~----~~---~~~~IiakIE 242 (510)
|...|+.-++.--+...|.+.+.. ...| ++|.+|++++++|+..+.+.+.. .| ..+++++.||
T Consensus 180 -------g~~~p~~l~D~~l~~~~Dl~~l~~--~g~g-~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtiki~vlIE 249 (532)
T 3cuz_A 180 -------GEAIPGSLFDFALYFFHNYQALLA--KGSG-PYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIE 249 (532)
T ss_dssp -------TEEEEHHHHHHHHHHHHHHHHHHH--TTCC-CEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECC
T ss_pred -------CCcCchHHHHHHHHHHHHHHHHHc--CCCC-CeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEec
Confidence 111222222221123445554411 1234 99999999999999999887741 12 3578999999
Q ss_pred CHHHHhchHHHHhh-c---CeeEEeCCcccCCCCc-------------------hhHHHHHHHHH-HHHHHcCCCeEE--
Q 010443 243 NQEGVVNFDDILRE-T---DSFMVARGDLGMEIPV-------------------EKIFLAQKMMI-YKCNLVGKPVVT-- 296 (510)
Q Consensus 243 t~~av~nldeI~~~-~---DgI~IgrgDLg~e~~~-------------------~~v~~~qk~ii-~~~~~~gkpviv-- 296 (510)
|+.|+.|++||+.. + .|+..|+.|+..++.. ..+..+..+++ .+|+++|++.|.
T Consensus 250 T~~a~~n~~eIa~al~~rv~gLn~G~~Dy~~s~i~~~~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~a~G~~aIdGm 329 (532)
T 3cuz_A 250 TLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGM 329 (532)
T ss_dssp SHHHHTSHHHHHHHTTTTEEEEECCSHHHHHHHHHHTTTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHhHHHHHHhccCCceEEEcCHHHHHHHHHhhcccCCCccCccccccccchHHHHHHHHHHHHHHHHcCCCCccCc
Confidence 99999999999975 4 4999999999877611 11344555554 999999998875
Q ss_pred ehhhhHhhhcCCCCChH--------hHHHHHHHHHcCCceEEec
Q 010443 297 ATQMLESMIKSPRPTRA--------EATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 297 aTqmLeSM~~~~~Ptra--------Ev~Dv~~av~~G~D~imLs 332 (510)
+-+ + |.-+.+ =..|...+..+|+||-+.-
T Consensus 330 ~a~-~------p~kD~e~~~~~~~~l~~dk~~~~~~GfdGkwvi 366 (532)
T 3cuz_A 330 AAF-I------PSKDEEHNNQVLNKVKADKSLEANNGHDGTWIA 366 (532)
T ss_dssp ECB-C------CCSSGGGCHHHHHHHHHHHHHHHHHTCSEEEES
T ss_pred ccc-C------CCCChhHHHHHHHHHHHHHHHHHHCCCCccccC
Confidence 211 1 111111 1245666888999998874
No 27
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=98.41 E-value=2.5e-07 Score=105.43 Aligned_cols=136 Identities=18% Similarity=0.157 Sum_probs=102.6
Q ss_pred CCCChhcHHHHHhccC---cCCCC---EEEEcCCCCHHHHHHHHHHhcc--------CC--CCceEEEEecCHHHHhchH
Q 010443 188 PTLTEKDKEDILRWGV---PNNID---MIALSFVRKGSDLVNVRKVLGP--------HA--KNIQLMSKVENQEGVVNFD 251 (510)
Q Consensus 188 p~lt~~D~~di~~~a~---~~g~d---~I~~sfV~sa~dv~~vr~~l~~--------~~--~~~~IiakIEt~~av~nld 251 (510)
|.+.+-..+.|.+.+. +.|.+ .|++|||+++++++.+++++.. .| .++.+.++||++.|+.+++
T Consensus 680 peif~~QlrAi~~Aa~~~~~~G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~G~~~~~~vg~MIEtP~a~l~ad 759 (876)
T 1vbg_A 680 PELTEMQARAIFEAAIAMTNQGVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVAD 759 (876)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHH
Confidence 4444555556622222 23765 6999999999999999987642 13 3688999999999999999
Q ss_pred HHHhhcCeeEEeCCccc-CCCCc----------------------------hhHHHHHHHHHHHHHHc--CCCeEEehhh
Q 010443 252 DILRETDSFMVARGDLG-MEIPV----------------------------EKIFLAQKMMIYKCNLV--GKPVVTATQM 300 (510)
Q Consensus 252 eI~~~~DgI~IgrgDLg-~e~~~----------------------------~~v~~~qk~ii~~~~~~--gkpvivaTqm 300 (510)
+|++.+|++.||..||. ..++. +.|..+.++++++|+++ |+|+.++.|+
T Consensus 760 eIA~~vDf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~ 839 (876)
T 1vbg_A 760 EIAEQAEFFSFGTNDLTQMTFGYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGEH 839 (876)
T ss_dssp HHTTTCSEEEECHHHHHHHHHTCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESGG
T ss_pred HHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEcCCc
Confidence 99999999999999988 32332 45777889999999998 9999998884
Q ss_pred hHhhhcCCCCChHhHHHHHHHHHcCCceEEeccC
Q 010443 301 LESMIKSPRPTRAEATDVANAVLDGTDCVMLSGE 334 (510)
Q Consensus 301 LeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~E 334 (510)
= ..| .-+...+..|.|.+-.|..
T Consensus 840 ~------gdP-----~~~~~l~~~Gl~~vS~sp~ 862 (876)
T 1vbg_A 840 G------GEP-----SSVAFFAKAGLDYVSCSPF 862 (876)
T ss_dssp G------GSH-----HHHHHHHHTTCSEEEECGG
T ss_pred C------CCH-----HHHHHHHHcCCCEEEECcc
Confidence 3 122 2335678899999988854
No 28
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=98.29 E-value=7.1e-07 Score=101.70 Aligned_cols=136 Identities=18% Similarity=0.198 Sum_probs=102.2
Q ss_pred CCCChhcHHHHHhccCc---C-CCC---EEEEcCCCCHHHHHHHHHHhcc--------CC--CCceEEEEecCHHHHhch
Q 010443 188 PTLTEKDKEDILRWGVP---N-NID---MIALSFVRKGSDLVNVRKVLGP--------HA--KNIQLMSKVENQEGVVNF 250 (510)
Q Consensus 188 p~lt~~D~~di~~~a~~---~-g~d---~I~~sfV~sa~dv~~vr~~l~~--------~~--~~~~IiakIEt~~av~nl 250 (510)
|.+.+-..+.|.+.+.. . |.+ .|++|||+++++++.+++++.. .| .++.+.++||++.|+.++
T Consensus 673 peif~~QlrAi~~Aa~~~~~~~G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~a 752 (873)
T 1kbl_A 673 PEIAKMQTRAVMEAAIEVKEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTA 752 (873)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTH
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHH
Confidence 44445555566222222 1 654 6999999999999999987642 13 368899999999999999
Q ss_pred HHHHhhcCeeEEeCCccc-CCCCc----------------------------hhHHHHHHHHHHHHHHc--CCCeEEehh
Q 010443 251 DDILRETDSFMVARGDLG-MEIPV----------------------------EKIFLAQKMMIYKCNLV--GKPVVTATQ 299 (510)
Q Consensus 251 deI~~~~DgI~IgrgDLg-~e~~~----------------------------~~v~~~qk~ii~~~~~~--gkpvivaTq 299 (510)
++|++.+|++.||..||. ..++. +.|..+.++++++|+++ |+|+.++.|
T Consensus 753 d~iA~~vdf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe 832 (873)
T 1kbl_A 753 DAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGE 832 (873)
T ss_dssp HHHTTTCSEEEECHHHHHHHHHTCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECSG
T ss_pred HHHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECCC
Confidence 999999999999999988 33332 35667888999999997 899999888
Q ss_pred hhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccC
Q 010443 300 MLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGE 334 (510)
Q Consensus 300 mLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~E 334 (510)
+= ..| .-+.-.+..|.|.+-.|..
T Consensus 833 ~~------gdP-----~~~~~l~~~Gl~~vS~sp~ 856 (873)
T 1kbl_A 833 HG------GDP-----SSVEFCHKVGLNYVSCSPF 856 (873)
T ss_dssp GG------GSH-----HHHHHHHHTTCSEEEECGG
T ss_pred CC------CCH-----HHHHHHHHcCCCEEEEChh
Confidence 43 122 2335678899999988844
No 29
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=98.26 E-value=3.2e-06 Score=91.04 Aligned_cols=243 Identities=19% Similarity=0.247 Sum_probs=144.8
Q ss_pred ccCCCCCCCCCeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHH---HHHHHHHhcCCcEEEEecCCC
Q 010443 11 RDVPNDKRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLN---NLRAAMHNTQILCAVMLDTKG 87 (510)
Q Consensus 11 ~~~p~~~~~~~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~---~ir~~~~~~~~~v~i~~Dl~G 87 (510)
.++|.+.+.||+-|- ||.+. +++.+.+.+|++++=++|--.....|+.+++ +++++.... .. - .+-.|
T Consensus 77 ~~~p~~l~~RR~~l~---~P~~~--km~~kAl~sgAd~vi~DlEDSVap~wk~~~~ar~~l~~al~~~-~~--~-~~~~G 147 (528)
T 3cux_A 77 AKLPKDLEDRRVEIT---GPVDR--KMVINALNSGAHLFMADFEDSNSPTWENAIEGQINLRDAVKGT-IS--H-KNENG 147 (528)
T ss_dssp CCCCGGGSCCSEEEE---EESCH--HHHHHHHTSSCSEEEEESSTTSCCCHHHHHHHHHHHHHHHHTC-CC--E-ECTTS
T ss_pred CCCChHhhcCeeEEE---CCCCH--HHHHHHHhcCCCEEEeccccCCCccccchHHHHHHHHHHHhcc-cc--c-cCCCC
Confidence 478999999999885 68843 9999999999999999999887666655443 444443311 00 0 00011
Q ss_pred CeeEeeecCCCCcEEecCCCEEEEEecCCCCCCccEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEe
Q 010443 88 PEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCE 167 (510)
Q Consensus 88 p~iR~g~~~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~i~~~v~ 167 (510)
+.+.|+.|....+.- +|--.+ +..-|++ ||.
T Consensus 148 -----------~~~~l~~~~~~l~VR------------~ng~~~-----~e~~v~~-dg~-------------------- 178 (528)
T 3cux_A 148 -----------KEYRLNSKTAVLIVR------------PRGWHL-----EEKHMQV-DGK-------------------- 178 (528)
T ss_dssp -----------CEECCCSSCCEEEEE------------CCCTTC-----EEEEEEE-TTE--------------------
T ss_pred -----------ceeecCCCCcEEEEE------------eCCCCC-----Ccchhcc-CCc--------------------
Confidence 223333221111111 000000 0011111 111
Q ss_pred eCeEecCCCCcccCCccccCCCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccC----C---CCceEEEE
Q 010443 168 NTAMLGERKNVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPH----A---KNIQLMSK 240 (510)
Q Consensus 168 ~~G~l~s~K~vnlp~~~~~lp~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~----~---~~~~Iiak 240 (510)
-+|+...++--+.-+|.+.+.+ ...|+ +|.+|++++++|+..+.+.+... | ..+++.+.
T Consensus 179 -----------~v~~~l~D~~l~~~hdl~~l~~--~~~gp-yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vl 244 (528)
T 3cux_A 179 -----------NMSGSLVDFGLYFFHNAKALLE--KGSGP-YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVL 244 (528)
T ss_dssp -----------EEEHHHHHHHHHHHHHHHHHHH--TTCCC-EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEE
T ss_pred -----------ccchHHHHHHHHHHHHHHHHHh--cCCCC-EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEE
Confidence 0111111110112233444411 23576 99999999999999998876421 2 36899999
Q ss_pred ecCHHHHhchHHHHhh-c---CeeEEeCCcccCCCCc--------------------hhHHHHHHHHHHHHHHcCCCeEE
Q 010443 241 VENQEGVVNFDDILRE-T---DSFMVARGDLGMEIPV--------------------EKIFLAQKMMIYKCNLVGKPVVT 296 (510)
Q Consensus 241 IEt~~av~nldeI~~~-~---DgI~IgrgDLg~e~~~--------------------~~v~~~qk~ii~~~~~~gkpviv 296 (510)
|||+.|+-|++||+.. . .|+..||.|+..++.. +-+...++.++.+|+++|++.|.
T Consensus 245 IET~~a~~n~~eI~~a~~~rv~gLn~G~~Dy~~s~i~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~a~G~~aIg 324 (528)
T 3cux_A 245 LETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFLKAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHRRNAPAIG 324 (528)
T ss_dssp ECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHHHHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCCEEC
T ss_pred eCCHHHHHhHHHHHHhccCceeEEecCHHHHHHHhhhhccCCccccchhhhhcccccHHHHHHHHHHHHHHHHcCCCCcc
Confidence 9999999999999965 3 4999999998877631 12455667788999999999875
Q ss_pred ehhhhHhhhcCCCCCh-----------HhHHHHHHHHHcCCceEEec
Q 010443 297 ATQMLESMIKSPRPTR-----------AEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 297 aTqmLeSM~~~~~Ptr-----------aEv~Dv~~av~~G~D~imLs 332 (510)
. |- .+ .|.+ .=..|-.....+|+||-+.-
T Consensus 325 G--m~-a~----ip~~~D~~~n~~~~~~~~~dk~~~~~~GfdGkwvi 364 (528)
T 3cux_A 325 G--MA-AQ----IPIKNNPEANEAAFEKVRADKEREALDGHDGTWVA 364 (528)
T ss_dssp --------------------------CHHHHHHHHHHHHTCSBEEES
T ss_pred c--cc-cc----CcCcCChHHHHHHHHHHHHHHHHHHhCCCCccccc
Confidence 1 11 11 2332 11256677889999998885
No 30
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=97.75 E-value=3.5e-05 Score=84.66 Aligned_cols=133 Identities=11% Similarity=0.067 Sum_probs=92.7
Q ss_pred cHHHHHhccCc--CCCCEEEEcCCCCHHHHHHHHHHhcc----CC---CCceEEEEecCHHHHhchHHHHh-hc---Cee
Q 010443 194 DKEDILRWGVP--NNIDMIALSFVRKGSDLVNVRKVLGP----HA---KNIQLMSKVENQEGVVNFDDILR-ET---DSF 260 (510)
Q Consensus 194 D~~di~~~a~~--~g~d~I~~sfV~sa~dv~~vr~~l~~----~~---~~~~IiakIEt~~av~nldeI~~-~~---DgI 260 (510)
-..|+ +..+. .|.++|.+|++++++|+..+.+.+.. .| ..+++.++|||+.|+.|++||+. .+ .|+
T Consensus 371 ~~hDl-~al~~sg~G~~yIvLPKmespeEV~~~~~lf~~~E~~lGlp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gL 449 (731)
T 1p7t_A 371 ALYDL-KVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFI 449 (731)
T ss_dssp HHHHH-HHCSSCSSSCEEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEE
T ss_pred HHhhH-HHHhhCCCCCcEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCCCceEEEEEECCHHHHHhHHHHHHhhccceEEE
Confidence 34566 44443 35899999999999999999887642 22 36889999999999999999975 33 499
Q ss_pred EEeCCcccCCC-Cc----------------hhHHHHHHHHHH---HHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH
Q 010443 261 MVARGDLGMEI-PV----------------EKIFLAQKMMIY---KCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN 320 (510)
Q Consensus 261 ~IgrgDLg~e~-~~----------------~~v~~~qk~ii~---~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~ 320 (510)
..|+.|+..++ +. +-+...++..+. +|+++|++.|.- .|-..|.-...=..|...
T Consensus 450 n~G~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcraaG~~aIgk-----Gm~a~p~dmeg~~~dk~~ 524 (731)
T 1p7t_A 450 NTGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGK-----GMWAMPDLMADMYSQKGD 524 (731)
T ss_dssp EECHHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTTCTTTSEEEE-----CCCCCTTCHHHHHHHTHH
T ss_pred EcCHHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHHHcCCCCccc-----ccccChhhHHHHHHHHHH
Confidence 99999998775 22 113334455554 899999998751 121222222222355566
Q ss_pred HHHcCCceEEec
Q 010443 321 AVLDGTDCVMLS 332 (510)
Q Consensus 321 av~~G~D~imLs 332 (510)
...+|+||-++-
T Consensus 525 ~~~~GfdGkwVi 536 (731)
T 1p7t_A 525 QLRAGANTAWVP 536 (731)
T ss_dssp HHHTTCSEEEES
T ss_pred HHhCCCCCcccC
Confidence 788999998884
No 31
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=97.41 E-value=0.00071 Score=77.28 Aligned_cols=138 Identities=17% Similarity=0.147 Sum_probs=103.9
Q ss_pred cCCCCChhcHHHHHhccC---cCCCC---EEEEcCCCCHHHHHHHHHHhc--------cCC--CCceEEEEecCHHHHhc
Q 010443 186 DLPTLTEKDKEDILRWGV---PNNID---MIALSFVRKGSDLVNVRKVLG--------PHA--KNIQLMSKVENQEGVVN 249 (510)
Q Consensus 186 ~lp~lt~~D~~di~~~a~---~~g~d---~I~~sfV~sa~dv~~vr~~l~--------~~~--~~~~IiakIEt~~av~n 249 (510)
..|.+.+-..+.|.+.+. +.|.+ -|++|||++.++++.+++.+. +.| .++++-.+||+|.|.-.
T Consensus 698 ~~peif~~QlrAi~rAa~~~~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el~~e~g~~~~~~vG~MiEvPsaal~ 777 (913)
T 1h6z_A 698 TYPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVT 777 (913)
T ss_dssp HSTTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHHT
T ss_pred CChHHHHHHHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecchHHHHH
Confidence 346666666777733322 23644 799999999999999998763 233 36889999999999999
Q ss_pred hHHHHhhcCeeEEeCCcccC-----CC-------------------C-----chhHHHHHHHHHHHHHH--cCCCeEEeh
Q 010443 250 FDDILRETDSFMVARGDLGM-----EI-------------------P-----VEKIFLAQKMMIYKCNL--VGKPVVTAT 298 (510)
Q Consensus 250 ldeI~~~~DgI~IgrgDLg~-----e~-------------------~-----~~~v~~~qk~ii~~~~~--~gkpvivaT 298 (510)
+|+|++.+|++-||--||.. += | .+.|..+.+.++++|++ .|+||.++.
T Consensus 778 ad~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgICG 857 (913)
T 1h6z_A 778 ADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICG 857 (913)
T ss_dssp HHHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECS
T ss_pred HHHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEEcC
Confidence 99999999999999877642 11 0 14667788899999997 699999998
Q ss_pred hhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccC
Q 010443 299 QMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGE 334 (510)
Q Consensus 299 qmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~E 334 (510)
|+=- -|. -+.-.+..|.|.+-.|..
T Consensus 858 E~~g------dP~-----~~~~l~~~Gid~vS~sp~ 882 (913)
T 1h6z_A 858 EHGG------DPA-----TIGFCHKVGLDYVSCSPF 882 (913)
T ss_dssp GGGG------CHH-----HHHHHHHHTCSEEEECGG
T ss_pred CCCC------CHH-----HHHHHHHcCCCEEEECch
Confidence 8541 122 235678899999999854
No 32
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=96.70 E-value=0.0076 Score=69.30 Aligned_cols=115 Identities=18% Similarity=0.119 Sum_probs=85.7
Q ss_pred EEEEcCCCCHHHHHHHHHHhc--------cCC--CCceEEEEecCHHHHhchHHHHhhcCeeEEeCCccc-----CCCC-
Q 010443 209 MIALSFVRKGSDLVNVRKVLG--------PHA--KNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLG-----MEIP- 272 (510)
Q Consensus 209 ~I~~sfV~sa~dv~~vr~~l~--------~~~--~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg-----~e~~- 272 (510)
.|++|||++.++++.+++.+. +.| .+++|-.+||+|.++-.+|+|++.+|++=||--||. ++=.
T Consensus 727 ~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~g~~~~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLTQ~tlg~DRd~ 806 (913)
T 2x0s_A 727 EIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDD 806 (913)
T ss_dssp EEEETTCCSHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHHHHHHTCCGGG
T ss_pred EEEeeecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHHHHHHHHhcCC
Confidence 589999999999998887653 223 367899999999999999999999999999988763 2211
Q ss_pred -----------------------chhHHHHHHHHHHHHHHcC--CCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCc
Q 010443 273 -----------------------VEKIFLAQKMMIYKCNLVG--KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTD 327 (510)
Q Consensus 273 -----------------------~~~v~~~qk~ii~~~~~~g--kpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D 327 (510)
.+-|..+.+..+++|++++ .||.++.||= .. =.-+...+..|.|
T Consensus 807 ~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgICGE~~---------gd--P~~~~~L~~~Gid 875 (913)
T 2x0s_A 807 AGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEHG---------GD--PATIGFCHKVGLD 875 (913)
T ss_dssp CHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSGGG---------GC--HHHHHHHHHHTCS
T ss_pred chhhhhhhhhccccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEEeCCcc---------cC--HHHHHHHHHcCCC
Confidence 1245555666666777665 5899999853 21 1224668889999
Q ss_pred eEEeccC
Q 010443 328 CVMLSGE 334 (510)
Q Consensus 328 ~imLs~E 334 (510)
.+-+|..
T Consensus 876 ~~S~sP~ 882 (913)
T 2x0s_A 876 YVSCSPF 882 (913)
T ss_dssp EEEECGG
T ss_pred EEEEChH
Confidence 9999844
No 33
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=94.96 E-value=0.041 Score=59.02 Aligned_cols=92 Identities=17% Similarity=0.298 Sum_probs=77.4
Q ss_pred CCCCEEEEcCCCCHHHHHHHHHHhcc--------CC-----CCceEEEEecCHHHHhchHHHHhh--c-----------C
Q 010443 205 NNIDMIALSFVRKGSDLVNVRKVLGP--------HA-----KNIQLMSKVENQEGVVNFDDILRE--T-----------D 258 (510)
Q Consensus 205 ~g~d~I~~sfV~sa~dv~~vr~~l~~--------~~-----~~~~IiakIEt~~av~nldeI~~~--~-----------D 258 (510)
..+..+++||.++++|+.++..++++ .| ..+.||..+||.+.+.|.++|++. . =
T Consensus 138 ~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~Q 217 (560)
T 3odm_A 138 PAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDL 217 (560)
T ss_dssp CSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEE
T ss_pred cccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeE
Confidence 45678999999999999999777732 12 266899999999999999999985 1 2
Q ss_pred eeEEeCCcccCCCCc----hhHHHHHHHHHHHHHHcCCCeEE
Q 010443 259 SFMVARGDLGMEIPV----EKIFLAQKMMIYKCNLVGKPVVT 296 (510)
Q Consensus 259 gI~IgrgDLg~e~~~----~~v~~~qk~ii~~~~~~gkpviv 296 (510)
-||+|+.|=+.+-|+ -.+..+|.++.+.|+++|.++-.
T Consensus 218 eVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~l 259 (560)
T 3odm_A 218 RIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISP 259 (560)
T ss_dssp EEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 799999998888887 47889999999999999999754
No 34
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=94.73 E-value=0.075 Score=61.04 Aligned_cols=106 Identities=14% Similarity=0.124 Sum_probs=86.3
Q ss_pred CCEEEEcCCCCHHHHHHHHHHhccCC--CCceEEEEecCHHHHhchHHHHhh--cC-----------eeEEeCCcccCCC
Q 010443 207 IDMIALSFVRKGSDLVNVRKVLGPHA--KNIQLMSKVENQEGVVNFDDILRE--TD-----------SFMVARGDLGMEI 271 (510)
Q Consensus 207 ~d~I~~sfV~sa~dv~~vr~~l~~~~--~~~~IiakIEt~~av~nldeI~~~--~D-----------gI~IgrgDLg~e~ 271 (510)
+..+++||.+++.||.++--+.++.| ..+.|+...||.+.++|..+|++. +. -||+|..|=+-+-
T Consensus 529 ~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~QeVMLGYSDS~KD~ 608 (970)
T 1jqo_A 529 FGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVMVGYSDSGKDA 608 (970)
T ss_dssp EEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEEEESTTHHHHS
T ss_pred hCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEecccccccc
Confidence 45688999999999999999988887 468999999999999999999985 11 6999999999999
Q ss_pred Cc----hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCCh
Q 010443 272 PV----EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTR 312 (510)
Q Consensus 272 ~~----~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~Ptr 312 (510)
|+ -.+..+|.++.+.|+++|.++...=-.=.|.-...-|+.
T Consensus 609 G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFHGRGGsvgRGGgp~~ 653 (970)
T 1jqo_A 609 GRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTH 653 (970)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGGGTCCCHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCCCCCCCCChH
Confidence 87 488899999999999999998654332233334444443
No 35
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=94.39 E-value=0.92 Score=42.62 Aligned_cols=119 Identities=16% Similarity=0.107 Sum_probs=72.7
Q ss_pred CchHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEE
Q 010443 377 SPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPIL 456 (510)
Q Consensus 377 ~~~~~ia~~av~~A~~~~a~aIvv~T~sG~tA~~iSr~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l 456 (510)
..++.....|++.|.+++.+-|||.|.+|.||+++...-.. -+++|+-+.=-..+-+|-. ++.+.+.|. -.|+.-+-
T Consensus 34 eNT~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~-~lVvVTh~~GF~~pg~~e~-~~e~~~~L~-~~G~~V~t 110 (206)
T 1t57_A 34 ENTERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEG-NIVSVTHHAGFREKGQLEL-EDEARDALL-ERGVNVYA 110 (206)
T ss_dssp GGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCS-EEEEECCCTTSSSTTCCSS-CHHHHHHHH-HHTCEEEC
T ss_pred ccHHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccC-CEEEEeCcCCCCCCCCCcC-CHHHHHHHH-hCCCEEEE
Confidence 34678888999999999999999999999999999987655 8888821100000444533 344444442 44544322
Q ss_pred eCCCCcC-------CCc-cCHHHHHH--------------HHHHHHHHcCCCCCCCEEEEEeec
Q 010443 457 AEGSAKA-------TDA-ESTEVILE--------------GALKSAIEKGLCSPGDAVVALHRI 498 (510)
Q Consensus 457 ~~~~~~~-------~~~-~~~e~~i~--------------~a~~~~~~~g~v~~GD~VVvv~g~ 498 (510)
..-..-. .|. -..-+.|. +..-.|.+.|++..|+.||.+.|.
T Consensus 111 ~tH~lsG~eR~is~kfGG~~p~eiiA~tLR~fgqG~KV~vEi~lMAaDAGlIp~geeVIAiGGT 174 (206)
T 1t57_A 111 GSHALSGVGRGISNRFGGVTPVEIMAETLRMVSQGFKVCVEIAIMAADAGLIPVDEEVIAIGGT 174 (206)
T ss_dssp CSCTTTTHHHHHHHHHCSCCHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTSSCSSSCEEEEECS
T ss_pred eeccccchhHHHHHhcCCCCHHHHHHHHHHHhCCCceEEEEEeeeeecCCCCCCCCeEEEEccc
Confidence 2111000 000 01112221 222456799999999999999998
No 36
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.26 E-value=0.4 Score=51.70 Aligned_cols=125 Identities=15% Similarity=0.154 Sum_probs=83.7
Q ss_pred ChhcHHHHHhccCcCCCCEEEE--cCCCCHHHHHHHHHHhccCCCCceEEE-EecCHHHHhchHHHHhhcCeeEEeCCcc
Q 010443 191 TEKDKEDILRWGVPNNIDMIAL--SFVRKGSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRETDSFMVARGDL 267 (510)
Q Consensus 191 t~~D~~di~~~a~~~g~d~I~~--sfV~sa~dv~~vr~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~~DgI~IgrgDL 267 (510)
.+.+.+.+ ...++.|+|+|++ ++-.+...++. .+++++...++.||| -+-|.++.++|-+ .-+|++-||-|-=
T Consensus 279 ~~d~~eR~-~aLv~AGvD~iviD~ahGhs~~v~~~-i~~ik~~~p~~~viaGNVaT~e~a~~Li~--aGAD~vkVGiGpG 354 (556)
T 4af0_A 279 RPGDKDRL-KLLAEAGLDVVVLDSSQGNSVYQIEF-IKWIKQTYPKIDVIAGNVVTREQAAQLIA--AGADGLRIGMGSG 354 (556)
T ss_dssp SHHHHHHH-HHHHHTTCCEEEECCSCCCSHHHHHH-HHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCS
T ss_pred CccHHHHH-HHHHhcCCcEEEEeccccccHHHHHH-HHHHHhhCCcceEEeccccCHHHHHHHHH--cCCCEEeecCCCC
Confidence 45566666 6678999998886 33334444444 444555445677666 8999999877643 3489999986653
Q ss_pred cCC-------CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 268 GME-------IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 268 g~e-------~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
++- +|.+. ..+...+.++|+.+|+|+|--.- .- --.|++.|+..|||++||.
T Consensus 355 SiCtTr~v~GvG~PQ-~tAi~~~a~~a~~~~vpvIADGG---------I~---~sGDi~KAlaaGAd~VMlG 413 (556)
T 4af0_A 355 SICITQEVMAVGRPQ-GTAVYAVAEFASRFGIPCIADGG---------IG---NIGHIAKALALGASAVMMG 413 (556)
T ss_dssp TTBCCTTTCCSCCCH-HHHHHHHHHHHGGGTCCEEEESC---------CC---SHHHHHHHHHTTCSEEEES
T ss_pred cccccccccCCCCcH-HHHHHHHHHHHHHcCCCEEecCC---------cC---cchHHHHHhhcCCCEEEEc
Confidence 221 12222 23445677888999999885322 11 2479999999999999994
No 37
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=94.16 E-value=0.69 Score=45.78 Aligned_cols=156 Identities=12% Similarity=0.062 Sum_probs=98.1
Q ss_pred CCChhcHHHHHhccCcCCCCEEEEcCCCCHH------HHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeE
Q 010443 189 TLTEKDKEDILRWGVPNNIDMIALSFVRKGS------DLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFM 261 (510)
Q Consensus 189 ~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~------dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~ 261 (510)
.++..++..|.+.+.+.|++.|-+.+-.+.+ +..++-+.+.+. .++++.+.+-+.+++ +..++. .|.|+
T Consensus 22 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~~n~~~i---~~a~~~G~~~V~ 97 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVLVPNMKGY---EAAAAAHADEIA 97 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEECSSHHHH---HHHHHTTCSEEE
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEEeCCHHHH---HHHHHCCCCEEE
Confidence 3677788777688888999998885422333 333443444443 467776766443333 333333 57777
Q ss_pred EeCCcccCC---------CCchhHHHHHHHHHHHHHHcCCCeE--EehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceE
Q 010443 262 VARGDLGME---------IPVEKIFLAQKMMIYKCNLVGKPVV--TATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCV 329 (510)
Q Consensus 262 IgrgDLg~e---------~~~~~v~~~qk~ii~~~~~~gkpvi--vaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~i 329 (510)
|. ++.+ .+.++....-+++++.|+++|++|- +.+-. +.....+-+..++.+++. +...|+|.+
T Consensus 98 i~---~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~--~~e~~~~~~~~~~~~~~~~~~~~G~d~i 172 (295)
T 1ydn_A 98 VF---ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVV--ECPYDGPVTPQAVASVTEQLFSLGCHEV 172 (295)
T ss_dssp EE---EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSS--EETTTEECCHHHHHHHHHHHHHHTCSEE
T ss_pred EE---EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEe--cCCcCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 73 3333 5667777888899999999999985 22210 000112334566666666 557899999
Q ss_pred EeccCCCCCCCHHHHHHHHHHHHHH
Q 010443 330 MLSGESAAGAYPEIAVKIMRRICIE 354 (510)
Q Consensus 330 mLs~Eta~G~yP~~~V~~m~~i~~~ 354 (510)
.|. +|.=...|.+.-+.++.+.+.
T Consensus 173 ~l~-Dt~G~~~P~~~~~lv~~l~~~ 196 (295)
T 1ydn_A 173 SLG-DTIGRGTPDTVAAMLDAVLAI 196 (295)
T ss_dssp EEE-ETTSCCCHHHHHHHHHHHHTT
T ss_pred Eec-CCCCCcCHHHHHHHHHHHHHh
Confidence 998 454446798888888877644
No 38
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=93.98 E-value=1.5 Score=41.00 Aligned_cols=119 Identities=18% Similarity=0.074 Sum_probs=76.9
Q ss_pred CchHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEE
Q 010443 377 SPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPIL 456 (510)
Q Consensus 377 ~~~~~ia~~av~~A~~~~a~aIvv~T~sG~tA~~iSr~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l 456 (510)
..++.....|++.|.+++.+-|||.|.||.||..+...-...-+++|+-+.=-..+-+|-. ++.+.+.|. -.|+.-+-
T Consensus 26 eNT~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~-~~e~~~~L~-~~G~~V~t 103 (201)
T 1vp8_A 26 ENTEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTM-PPEVEEELR-KRGAKIVR 103 (201)
T ss_dssp GGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSS-CHHHHHHHH-HTTCEEEE
T ss_pred ccHHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcC-CHHHHHHHH-hCCCEEEE
Confidence 3467888899999999999999999999999999999877788999932110011445533 344444443 55654333
Q ss_pred eCCCCc-------CCCc-cCHHHHHHHHHH---------------HHHHcCCCCCCCEEEEEeec
Q 010443 457 AEGSAK-------ATDA-ESTEVILEGALK---------------SAIEKGLCSPGDAVVALHRI 498 (510)
Q Consensus 457 ~~~~~~-------~~~~-~~~e~~i~~a~~---------------~~~~~g~v~~GD~VVvv~g~ 498 (510)
..-..- ..|. -..-+.|..++. .|.+.|++.. +.||.+.|.
T Consensus 104 ~tH~lsgveR~is~kfGG~~p~eiiA~tLR~~fgqG~KV~vEi~lMAaDAGlIp~-eeVIAiGGT 167 (201)
T 1vp8_A 104 QSHILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLKVCVEITIMAADSGAIPI-EEVVAVGGR 167 (201)
T ss_dssp CCCTTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSCS-SCEEEEECS
T ss_pred EeccccchhHHHHHhcCCCCHHHHHHHHHHHHhcCCceEEEEEeeeecccCCCCc-ceEEEEccc
Confidence 221110 0000 123334444444 6779999999 999999988
No 39
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=93.94 E-value=0.085 Score=60.11 Aligned_cols=93 Identities=18% Similarity=0.274 Sum_probs=81.2
Q ss_pred CCCCEEEEcCCCCHHHHHHHHHHhccCC--CCceEEEEecCHHHHhchHHHHhhc-------------CeeEEeCCcccC
Q 010443 205 NNIDMIALSFVRKGSDLVNVRKVLGPHA--KNIQLMSKVENQEGVVNFDDILRET-------------DSFMVARGDLGM 269 (510)
Q Consensus 205 ~g~d~I~~sfV~sa~dv~~vr~~l~~~~--~~~~IiakIEt~~av~nldeI~~~~-------------DgI~IgrgDLg~ 269 (510)
..+..+++||.+++.|+.++--+.++.| ..+.|+...||.+.++|..+|++.. =-||+|..|=+-
T Consensus 467 ~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~K 546 (883)
T 1jqn_A 467 GSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAK 546 (883)
T ss_dssp TSEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHHH
T ss_pred hhcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeeccccc
Confidence 4566789999999999999999998887 3688999999999999999999851 169999999888
Q ss_pred CCCc----hhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 270 EIPV----EKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 270 e~~~----~~v~~~qk~ii~~~~~~gkpviva 297 (510)
+-|+ -.+..+|.++.+.|+++|.++...
T Consensus 547 D~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lF 578 (883)
T 1jqn_A 547 DAGVMAASWAQYQAQDALIKTCEKAGIELTLF 578 (883)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHcCCeEEEe
Confidence 8887 488899999999999999998653
No 40
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.67 E-value=0.77 Score=47.25 Aligned_cols=122 Identities=20% Similarity=0.296 Sum_probs=75.1
Q ss_pred cHHHHHhccCcCCCCEEEE--cCCCCHHHHHHHHHHhccCCCCceEEE-EecCHHHHhchHHHHhhcCeeEEeCCcccC-
Q 010443 194 DKEDILRWGVPNNIDMIAL--SFVRKGSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRETDSFMVARGDLGM- 269 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~--sfV~sa~dv~~vr~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~~DgI~IgrgDLg~- 269 (510)
+.+.+ +.+++.|+|+|.+ ++..+...++.++++-+ ...++.+++ .+-|++..+.+.+ .-+|+|.+|-|.=+.
T Consensus 109 ~~~~~-~~lieaGvd~I~idta~G~~~~~~~~I~~ik~-~~p~v~Vi~G~v~t~e~A~~a~~--aGAD~I~vG~gpGs~~ 184 (366)
T 4fo4_A 109 NEERV-KALVEAGVDVLLIDSSHGHSEGVLQRIRETRA-AYPHLEIIGGNVATAEGARALIE--AGVSAVKVGIGPGSIC 184 (366)
T ss_dssp CHHHH-HHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH-HCTTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTTB
T ss_pred HHHHH-HHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH-hcCCCceEeeeeCCHHHHHHHHH--cCCCEEEEecCCCCCC
Confidence 44455 6678899999987 55555544444444332 223567666 5888776655543 238999996221111
Q ss_pred ------CCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 270 ------EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 270 ------e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
..+.+.+ ..-..+.+.|+..++|+|.+.-+- ...|++.++..|+|++|+.
T Consensus 185 ~tr~~~g~g~p~~-~~l~~v~~~~~~~~iPVIA~GGI~------------~~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 185 TTRIVTGVGVPQI-TAIADAAGVANEYGIPVIADGGIR------------FSGDISKAIAAGASCVMVG 240 (366)
T ss_dssp CHHHHHCCCCCHH-HHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred CcccccCcccchH-HHHHHHHHHHhhcCCeEEEeCCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 0122222 233456666777899998754432 2457899999999999995
No 41
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=93.54 E-value=0.14 Score=47.71 Aligned_cols=133 Identities=13% Similarity=0.096 Sum_probs=82.0
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEE---ecCHHHHhchHHHHhh-cCeeEEeCCcccCCCCchh
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSK---VENQEGVVNFDDILRE-TDSFMVARGDLGMEIPVEK 275 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~Iiak---IEt~~av~nldeI~~~-~DgI~IgrgDLg~e~~~~~ 275 (510)
+.+.+.|+|+|.++-....+++.++.+.+++.| ..++.- .+| .++.+..+.+. +|.|.+.+|-=|...+...
T Consensus 71 ~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g--~~~~v~~~~~~t--~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~ 146 (211)
T 3f4w_A 71 QLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAG--KQVVVDMICVDD--LPARVRLLEEAGADMLAVHTGTDQQAAGRKP 146 (211)
T ss_dssp HHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT--CEEEEECTTCSS--HHHHHHHHHHHTCCEEEEECCHHHHHTTCCS
T ss_pred HHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcC--CeEEEEecCCCC--HHHHHHHHHHcCCCEEEEcCCCcccccCCCC
Confidence 566889999999987665577788888877665 333332 233 24556777776 7998887653222222111
Q ss_pred HHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHH
Q 010443 276 IFLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 353 (510)
Q Consensus 276 v~~~qk~ii~~~~~~-gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 353 (510)
+. .-+++ .... +.|+++..-+ .| .++..+...|+|++....--..+..|.++++.+.+.++
T Consensus 147 ~~-~i~~l---~~~~~~~~i~~~gGI--------~~-----~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~~~ 208 (211)
T 3f4w_A 147 ID-DLITM---LKVRRKARIAVAGGI--------SS-----QTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLL 208 (211)
T ss_dssp HH-HHHHH---HHHCSSCEEEEESSC--------CT-----TTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHHHH
T ss_pred HH-HHHHH---HHHcCCCcEEEECCC--------CH-----HHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHh
Confidence 11 11122 2222 5777654321 12 35677788899999997655556789998888777554
No 42
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=93.21 E-value=0.93 Score=45.94 Aligned_cols=160 Identities=12% Similarity=0.121 Sum_probs=103.8
Q ss_pred CCChhcHHHHHh-ccCcCCCCEEEE-cCCCCHHHHHHHHHHhcc-----CCCCceEEEEecCHHHHhchHHHHhh-cCe-
Q 010443 189 TLTEKDKEDILR-WGVPNNIDMIAL-SFVRKGSDLVNVRKVLGP-----HAKNIQLMSKVENQEGVVNFDDILRE-TDS- 259 (510)
Q Consensus 189 ~lt~~D~~di~~-~a~~~g~d~I~~-sfV~sa~dv~~vr~~l~~-----~~~~~~IiakIEt~~av~nldeI~~~-~Dg- 259 (510)
.++..|+..|.+ ...+.|++.|=+ +|+.++++.+.++++.+. .-+++.+.+..=+.. .++..++. .|.
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~---~i~~a~~~g~~~v 113 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK---TVDWIKDSGAKVL 113 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH---HHHHHHHHTCCEE
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh---hHHHHHHCCCCEE
Confidence 467788887767 667799999888 667778666666655431 224567777766555 34444443 464
Q ss_pred -eEEeCCccc----CCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEecc
Q 010443 260 -FMVARGDLG----MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 333 (510)
Q Consensus 260 -I~IgrgDLg----~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~ 333 (510)
++++--|+= .....++.....+.+++.|+++|+.+.+.... +-..++-+...+.+++. +...|+|.|.|.
T Consensus 114 ~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~- 189 (337)
T 3ble_A 114 NLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED---WSNGFRNSPDYVKSLVEHLSKEHIERIFLP- 189 (337)
T ss_dssp EEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET---HHHHHHHCHHHHHHHHHHHHTSCCSEEEEE-
T ss_pred EEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE---CCCCCcCCHHHHHHHHHHHHHcCCCEEEEe-
Confidence 444433431 12344566677788999999999998764321 11112233455566666 556799999997
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH
Q 010443 334 ESAAGAYPEIAVKIMRRICIEA 355 (510)
Q Consensus 334 Eta~G~yP~~~V~~m~~i~~~a 355 (510)
+|.=...|.++-+.++.+.++.
T Consensus 190 DT~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 190 DTLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHC
T ss_pred cCCCCcCHHHHHHHHHHHHHhc
Confidence 7777788999999888876654
No 43
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=92.69 E-value=0.55 Score=48.96 Aligned_cols=118 Identities=18% Similarity=0.280 Sum_probs=72.0
Q ss_pred HHHHhccCcCCCCEEEE--cCCCCHHHHHHHHHHhccCCCCceEEE-EecCHHHHhchHHHHhh-cCeeEEeC--CcccC
Q 010443 196 EDILRWGVPNNIDMIAL--SFVRKGSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRE-TDSFMVAR--GDLGM 269 (510)
Q Consensus 196 ~di~~~a~~~g~d~I~~--sfV~sa~dv~~vr~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~-~DgI~Igr--gDLg~ 269 (510)
+.+ +.+++.|+|+|.+ ++-.+....+.++.+-... ++++++ .+=|.+..+.+ .+. +|+|.+|- |..+.
T Consensus 147 e~~-~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~--~i~Vi~g~V~t~e~A~~a---~~aGAD~I~vG~g~Gs~~~ 220 (400)
T 3ffs_A 147 ERA-KLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM--NIDVIVGNVVTEEATKEL---IENGADGIKVGIGPGSICT 220 (400)
T ss_dssp HHH-HHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTC--CCEEEEEEECSHHHHHHH---HHTTCSEEEECC-------
T ss_pred HHH-HHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcC--CCeEEEeecCCHHHHHHH---HHcCCCEEEEeCCCCcCcc
Confidence 345 6678899999987 6665543344444433222 567776 67666655443 333 89999963 22110
Q ss_pred -----CCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 270 -----EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 270 -----e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
..+.+. ..+-.++.+.+++.+.|+|-+.-+- ...|++.++..|+|++|+.
T Consensus 221 tr~~~g~g~p~-~~al~~v~~~~~~~~IPVIA~GGI~------------~~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 221 TRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADGGIR------------YSGDIGKALAVGASSVMIG 275 (400)
T ss_dssp --CCSCBCCCH-HHHHHHHHHHHTTTTCCEEEESCCC------------SHHHHHHHHTTTCSEEEEC
T ss_pred cccccccchhH-HHHHHHHHHHHHhcCCCEEecCCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 011222 2344566666767799998765433 2568899999999999983
No 44
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=92.52 E-value=1 Score=46.25 Aligned_cols=120 Identities=18% Similarity=0.258 Sum_probs=70.6
Q ss_pred HHHHHhccCcCCCCEEEE--cCCCCHHHHHHHHHHhccCCCCceEEE-EecCHHHHhchHHHHhhcCeeEEe--CCcccC
Q 010443 195 KEDILRWGVPNNIDMIAL--SFVRKGSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRETDSFMVA--RGDLGM 269 (510)
Q Consensus 195 ~~di~~~a~~~g~d~I~~--sfV~sa~dv~~vr~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~~DgI~Ig--rgDLg~ 269 (510)
.+.+ +.+++.|+|+|.+ ++-.+...++.++++-+.. ++.+++ .+-|++..+.+.+ .-+|+|.+| +|....
T Consensus 107 ~e~a-~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~--~~~Vivg~v~t~e~A~~l~~--aGaD~I~VG~~~Gs~~~ 181 (361)
T 3khj_A 107 IERA-KLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM--NIDVIVGNVVTEEATKELIE--NGADGIKVGIGPGSICT 181 (361)
T ss_dssp HHHH-HHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC--CCEEEEEEECSHHHHHHHHH--TTCSEEEECSSCCTTCC
T ss_pred HHHH-HHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc--CCcEEEccCCCHHHHHHHHH--cCcCEEEEecCCCcCCC
Confidence 3445 5668899999987 4433432233333322222 467775 7777776544432 237999996 332110
Q ss_pred -----CCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 270 -----EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 270 -----e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
..+.+. ...-.++.+.++..+.|+|.+.-+- ...|++.++..|+|++|+.
T Consensus 182 tr~~~g~g~p~-~~~i~~v~~~~~~~~iPVIA~GGI~------------~~~di~kala~GAd~V~vG 236 (361)
T 3khj_A 182 TRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADGGIR------------YSGDIGKALAVGASSVMIG 236 (361)
T ss_dssp HHHHTCBCCCH-HHHHHHHHHHHHHHTCCEEEESCCC------------SHHHHHHHHHHTCSEEEES
T ss_pred cccccCCCCCc-HHHHHHHHHHHhhcCCeEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 011222 2334556666777899998754422 2367888999999999984
No 45
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=92.40 E-value=2.7 Score=41.96 Aligned_cols=162 Identities=12% Similarity=0.121 Sum_probs=101.5
Q ss_pred CCChhcHHHHHhccCcCCCCEEEEc-CCCC-----HHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCe--e
Q 010443 189 TLTEKDKEDILRWGVPNNIDMIALS-FVRK-----GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDS--F 260 (510)
Q Consensus 189 ~lt~~D~~di~~~a~~~g~d~I~~s-fV~s-----a~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dg--I 260 (510)
.++..++..|.+...+.|++.|=+. |+.+ ..|..++.+.+.+. .++.+.+.+.+.++++..-+ .-.|. +
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~i~~a~~--~g~~~v~i 100 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE-KGVTYAALVPNQRGLENALE--GGINEACV 100 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-TTCEEEEECCSHHHHHHHHH--HTCSEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhc-CCCeEEEEeCCHHhHHHHHh--CCcCEEEE
Confidence 4677888887677778999998775 3332 13444555555543 56677776666555443322 12564 4
Q ss_pred EEeCCcc----cCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEeccCC
Q 010443 261 MVARGDL----GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGES 335 (510)
Q Consensus 261 ~IgrgDL----g~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~Et 335 (510)
+++-.|+ -.....++.....+++++.++++|+.|-..=-+-=+.....+-+...+.+++. +...|+|.|.|. +|
T Consensus 101 ~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-DT 179 (307)
T 1ydo_A 101 FMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLG-DT 179 (307)
T ss_dssp EEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEE-CS
T ss_pred EeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEc-CC
Confidence 4444443 22344567777788999999999999843100000000112335566677666 567899999998 78
Q ss_pred CCCCCHHHHHHHHHHHHHH
Q 010443 336 AAGAYPEIAVKIMRRICIE 354 (510)
Q Consensus 336 a~G~yP~~~V~~m~~i~~~ 354 (510)
.=...|.+.-+.++.+.+.
T Consensus 180 ~G~~~P~~v~~lv~~l~~~ 198 (307)
T 1ydo_A 180 IGAANPAQVETVLEALLAR 198 (307)
T ss_dssp SCCCCHHHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHHh
Confidence 7778899998888887654
No 46
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=92.37 E-value=2.1 Score=42.48 Aligned_cols=160 Identities=11% Similarity=0.040 Sum_probs=99.3
Q ss_pred CCChhcHHHHHhccCcCCCCEEEEcC-CCC-----HHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEE
Q 010443 189 TLTEKDKEDILRWGVPNNIDMIALSF-VRK-----GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMV 262 (510)
Q Consensus 189 ~lt~~D~~di~~~a~~~g~d~I~~sf-V~s-----a~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~I 262 (510)
.++..++..|.+.+.+.|++.|-+.| +.. ..|..++.+.+.+. .++.+.+.+.+.+.++..-+ .-.|.|++
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~i~~a~~--aG~~~v~i 102 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQR-PGVTYAALAPNLKGFEAALE--SGVKEVAV 102 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-TTSEEEEECCSHHHHHHHHH--TTCCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhc-CCCEEEEEeCCHHHHHHHHh--CCcCEEEE
Confidence 46778888876777889999988754 322 13444444445433 56677777655444433222 12587776
Q ss_pred -eC-Ccc----cCCCCchhHHHHHHHHHHHHHHcCCCeEE--ehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEecc
Q 010443 263 -AR-GDL----GMEIPVEKIFLAQKMMIYKCNLVGKPVVT--ATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 333 (510)
Q Consensus 263 -gr-gDL----g~e~~~~~v~~~qk~ii~~~~~~gkpviv--aTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~ 333 (510)
.. -|+ -..++.++.....+++++.|+++|+.|-. .+- + +-....+-+..++.+++. +...|+|.+.|.
T Consensus 103 ~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~-~-~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~- 179 (302)
T 2ftp_A 103 FAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCV-L-GCPYDGDVDPRQVAWVARELQQMGCYEVSLG- 179 (302)
T ss_dssp EEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECT-T-CBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE-
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEE-e-eCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe-
Confidence 22 232 12256778888889999999999999832 110 0 000111334456666665 457899999998
Q ss_pred CCCCCCCHHHHHHHHHHHHHH
Q 010443 334 ESAAGAYPEIAVKIMRRICIE 354 (510)
Q Consensus 334 Eta~G~yP~~~V~~m~~i~~~ 354 (510)
+|.=...|.+.-+.++.+.+.
T Consensus 180 DT~G~~~P~~~~~lv~~l~~~ 200 (302)
T 2ftp_A 180 DTIGVGTAGATRRLIEAVASE 200 (302)
T ss_dssp ESSSCCCHHHHHHHHHHHTTT
T ss_pred CCCCCcCHHHHHHHHHHHHHh
Confidence 665556799888888877543
No 47
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=92.23 E-value=0.86 Score=48.88 Aligned_cols=125 Identities=17% Similarity=0.211 Sum_probs=75.2
Q ss_pred hhcHHHHHhccCcCCCCEEEEcCCC-CHHHHHHHHHHhccCCCCceEEE-EecCHHHHhchHHHHhhcCeeEEeCCcccC
Q 010443 192 EKDKEDILRWGVPNNIDMIALSFVR-KGSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRETDSFMVARGDLGM 269 (510)
Q Consensus 192 ~~D~~di~~~a~~~g~d~I~~sfV~-sa~dv~~vr~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~~DgI~IgrgDLg~ 269 (510)
+.+.+.+ +..++.|+|.|.+.... ..+.+.+.-+.+++.-.++.+++ -+-|.+..+.+.+ .-+|+|.+|.|-=+.
T Consensus 255 ~d~~era-~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~--aGad~i~vg~g~gsi 331 (511)
T 3usb_A 255 ADAMTRI-DALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIE--AGANVVKVGIGPGSI 331 (511)
T ss_dssp TTHHHHH-HHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTT
T ss_pred cchHHHH-HHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHH--hCCCEEEECCCCccc
Confidence 3445566 66788999999985432 12222222222322223455555 6777766544433 237999986543221
Q ss_pred C-------CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 270 E-------IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 270 e-------~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
. .+.+.+ .+-..+.++|++.+.|+|.+.-+- -..|++.|+..|||++|+.
T Consensus 332 ~~~~~~~g~g~p~~-~~l~~v~~~~~~~~iPVIa~GGI~------------~~~di~kala~GA~~V~vG 388 (511)
T 3usb_A 332 CTTRVVAGVGVPQL-TAVYDCATEARKHGIPVIADGGIK------------YSGDMVKALAAGAHVVMLG 388 (511)
T ss_dssp CCHHHHHCCCCCHH-HHHHHHHHHHHTTTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred cccccccCCCCCcH-HHHHHHHHHHHhCCCcEEEeCCCC------------CHHHHHHHHHhCchhheec
Confidence 1 112222 344566777888899999765432 3578899999999999995
No 48
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.00 E-value=0.72 Score=49.21 Aligned_cols=121 Identities=17% Similarity=0.270 Sum_probs=75.1
Q ss_pred hhcHHHHHhccCcCCCCEEEEc--CCCCH---HHHHHHHHHhccCCCCceEEEE-ecCHHHHhchHHHHhhcCeeEEeCC
Q 010443 192 EKDKEDILRWGVPNNIDMIALS--FVRKG---SDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRETDSFMVARG 265 (510)
Q Consensus 192 ~~D~~di~~~a~~~g~d~I~~s--fV~sa---~dv~~vr~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~~DgI~Igrg 265 (510)
+.+.+.+ +..++.|+|+|.+- +-.+. +.++++++.. .++.+++. +-|.+..+.+.+ .-+|+|.+|-|
T Consensus 228 ~~~~~~a-~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~----p~~~Vi~g~v~t~e~a~~l~~--aGaD~I~vg~g 300 (490)
T 4avf_A 228 ADTGERV-AALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTF----PDVQVIGGNIATAEAAKALAE--AGADAVKVGIG 300 (490)
T ss_dssp TTHHHHH-HHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHC----TTSEEEEEEECSHHHHHHHHH--TTCSEEEECSS
T ss_pred cchHHHH-HHHhhcccceEEecccCCcchhHHHHHHHHHHHC----CCceEEEeeeCcHHHHHHHHH--cCCCEEEECCC
Confidence 4455666 66788999999863 33333 3344444332 35677776 777766544332 23899999644
Q ss_pred cccC-------CCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 266 DLGM-------EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 266 DLg~-------e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
.=+. ..+.+. ..+-.++.++|++.++|+|.+.-+- -..|++.++..|||++|+.
T Consensus 301 ~Gs~~~t~~~~g~g~p~-~~~l~~v~~~~~~~~iPVIa~GGI~------------~~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 301 PGSICTTRIVAGVGVPQ-ISAIANVAAALEGTGVPLIADGGIR------------FSGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp CSTTCHHHHHTCBCCCH-HHHHHHHHHHHTTTTCCEEEESCCC------------SHHHHHHHHHHTCSEEEEC
T ss_pred CCcCCCccccCCCCccH-HHHHHHHHHHhccCCCcEEEeCCCC------------CHHHHHHHHHcCCCeeeec
Confidence 3111 112222 2344566777777899999765432 2468888999999999995
No 49
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=91.55 E-value=1.5 Score=46.93 Aligned_cols=121 Identities=17% Similarity=0.258 Sum_probs=75.5
Q ss_pred hhcHHHHHhccCcCCCCEEEEcCC--CCH---HHHHHHHHHhccCCCCceEEE-EecCHHHHhchHHHHhhcCeeEEeCC
Q 010443 192 EKDKEDILRWGVPNNIDMIALSFV--RKG---SDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRETDSFMVARG 265 (510)
Q Consensus 192 ~~D~~di~~~a~~~g~d~I~~sfV--~sa---~dv~~vr~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~~DgI~Igrg 265 (510)
+.+.+.+ +..++.|+|.|.+-.. .+. +.++++++.. .++.|++ .+-|.+..+.+.+ .-+|+|.++-|
T Consensus 230 ~d~~~~a-~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~----p~~~Vi~g~v~t~e~a~~l~~--aGaD~I~Vg~g 302 (496)
T 4fxs_A 230 PGNEERV-KALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAY----PHLEIIGGNVATAEGARALIE--AGVSAVKVGIG 302 (496)
T ss_dssp SCCHHHH-HHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHC----TTCCEEEEEECSHHHHHHHHH--HTCSEEEECSS
T ss_pred cchHHHH-HHHHhccCceEEeccccccchHHHHHHHHHHHHC----CCceEEEcccCcHHHHHHHHH--hCCCEEEECCC
Confidence 4455666 6668889999988543 233 3333333322 3456666 4878776644432 23899998644
Q ss_pred cccCCC-------CchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 266 DLGMEI-------PVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 266 DLg~e~-------~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
.=+... +.+ -..+-.++.++|++.++|+|.+.-+- -..|++.|+..|||++|+.
T Consensus 303 ~Gs~~~tr~~~g~g~p-~~~~i~~v~~~~~~~~iPVIa~GGI~------------~~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 303 PGSICTTRIVTGVGVP-QITAIADAAGVANEYGIPVIADGGIR------------FSGDISKAIAAGASCVMVG 363 (496)
T ss_dssp CCTTBCHHHHHCCCCC-HHHHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred CCcCcccccccCCCcc-HHHHHHHHHHHhccCCCeEEEeCCCC------------CHHHHHHHHHcCCCeEEec
Confidence 322211 111 23344677778888899999765432 2468889999999999995
No 50
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=91.52 E-value=0.43 Score=45.76 Aligned_cols=135 Identities=11% Similarity=0.127 Sum_probs=80.2
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeC---CcccCCCCchhH
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVAR---GDLGMEIPVEKI 276 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~Igr---gDLg~e~~~~~v 276 (510)
+.+.+.|+|+|.+.. +..+++.+..+.+++.|..+.+. +-....++.+++++...|.|++-. |==|.......+
T Consensus 81 ~~~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G~k~gva--l~p~t~~e~l~~~l~~~D~Vl~msv~pGf~Gq~f~~~~l 157 (228)
T 3ovp_A 81 KPMAVAGANQYTFHL-EATENPGALIKDIRENGMKVGLA--IKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMM 157 (228)
T ss_dssp HHHHHHTCSEEEEEG-GGCSCHHHHHHHHHHTTCEEEEE--ECTTSCGGGTGGGGGGCSEEEEESSCTTTCSCCCCGGGH
T ss_pred HHHHHcCCCEEEEcc-CCchhHHHHHHHHHHcCCCEEEE--EcCCCCHHHHHHHhccCCeEEEeeecCCCCCcccCHHHH
Confidence 344678999999975 55556777777777766554444 433334688889998899888742 221222222222
Q ss_pred HHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHH
Q 010443 277 FLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIE 354 (510)
Q Consensus 277 ~~~qk~ii~~~~~~--gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~ 354 (510)
.. + +..++. +.|+.+..-+ .|. .+..++..|+|.++...--.-...|.++++.+++.+.+
T Consensus 158 ~k----i-~~lr~~~~~~~I~VdGGI--------~~~-----t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~~~ 219 (228)
T 3ovp_A 158 PK----V-HWLRTQFPSLDIEVDGGV--------GPD-----TVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSE 219 (228)
T ss_dssp HH----H-HHHHHHCTTCEEEEESSC--------STT-----THHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHHHH
T ss_pred HH----H-HHHHHhcCCCCEEEeCCc--------CHH-----HHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHH
Confidence 22 1 122222 3455443321 233 34677888999999874333346799999888876554
Q ss_pred H
Q 010443 355 A 355 (510)
Q Consensus 355 a 355 (510)
+
T Consensus 220 ~ 220 (228)
T 3ovp_A 220 A 220 (228)
T ss_dssp H
T ss_pred H
Confidence 3
No 51
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=91.39 E-value=1 Score=45.35 Aligned_cols=107 Identities=10% Similarity=0.182 Sum_probs=67.7
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeEE-eCCcccCCCC-chhH
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMV-ARGDLGMEIP-VEKI 276 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~I-grgDLg~e~~-~~~v 276 (510)
+.+.+.|+|+|.+++-...+.++.+++. ++.++.++.+.+-... +.+. +|+|.+ |+ +-|-..+ ...+
T Consensus 82 ~~a~~~g~d~V~~~~g~p~~~i~~l~~~------g~~v~~~v~~~~~a~~---~~~~GaD~i~v~g~-~~GG~~g~~~~~ 151 (332)
T 2z6i_A 82 DLVIEEGVKVVTTGAGNPSKYMERFHEA------GIIVIPVVPSVALAKR---MEKIGADAVIAEGM-EAGGHIGKLTTM 151 (332)
T ss_dssp HHHHHTTCSEEEECSSCGGGTHHHHHHT------TCEEEEEESSHHHHHH---HHHTTCSCEEEECT-TSSEECCSSCHH
T ss_pred HHHHHCCCCEEEECCCChHHHHHHHHHc------CCeEEEEeCCHHHHHH---HHHcCCCEEEEECC-CCCCCCCCccHH
Confidence 5678899999999986556666666542 4789999988765443 3333 799999 43 2222222 1122
Q ss_pred HHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 277 FLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 277 ~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
..-+++ ....+.|++.+.-+- + -.|+..++..|+|++++.
T Consensus 152 -~ll~~i---~~~~~iPViaaGGI~---------~---~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 152 -TLVRQV---ATAISIPVIAAGGIA---------D---GEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp -HHHHHH---HHHCSSCEEEESSCC---------S---HHHHHHHHHTTCSEEEEC
T ss_pred -HHHHHH---HHhcCCCEEEECCCC---------C---HHHHHHHHHcCCCEEEec
Confidence 112222 223579999876532 1 246777888999999985
No 52
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=91.33 E-value=1.5 Score=43.56 Aligned_cols=162 Identities=13% Similarity=0.110 Sum_probs=98.9
Q ss_pred CCChhcHHHHHhccCcCCCCEEEEcC-CCC-----HHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeE
Q 010443 189 TLTEKDKEDILRWGVPNNIDMIALSF-VRK-----GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFM 261 (510)
Q Consensus 189 ~lt~~D~~di~~~a~~~g~d~I~~sf-V~s-----a~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~ 261 (510)
.++..++..|.+...+.|++.|=+.+ +.. ..|..++.+.+.+. .++.+.+.+.+.++++. .++. .|.|.
T Consensus 23 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~i~~---a~~ag~~~v~ 98 (298)
T 2cw6_A 23 IVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKF-PGINYPVLTPNLKGFEA---AVAAGAKEVV 98 (298)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCC-TTCBCCEECCSHHHHHH---HHHTTCSEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhC-CCCEEEEEcCCHHhHHH---HHHCCCCEEE
Confidence 36777777776777889999987753 332 13555566666543 34444455555554433 3333 46444
Q ss_pred E--eCCccc----CCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEeccC
Q 010443 262 V--ARGDLG----MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGE 334 (510)
Q Consensus 262 I--grgDLg----~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~E 334 (510)
| +-.|.- ...+.++.....+++++.|+++|+++-+..-+-=+.....+-+..++.+++. +...|+|.+.|. +
T Consensus 99 i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-D 177 (298)
T 2cw6_A 99 IFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLG-D 177 (298)
T ss_dssp EEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE-E
T ss_pred EEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec-C
Confidence 3 333321 1234566667778899999999999854211110000111234566666665 567899999998 6
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q 010443 335 SAAGAYPEIAVKIMRRICIEA 355 (510)
Q Consensus 335 ta~G~yP~~~V~~m~~i~~~a 355 (510)
|.=...|.+.-+.++.+.+..
T Consensus 178 T~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 178 TIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp TTSCCCHHHHHHHHHHHHHHS
T ss_pred CCCCcCHHHHHHHHHHHHHhC
Confidence 766778999999988887654
No 53
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=91.19 E-value=2.3 Score=41.50 Aligned_cols=69 Identities=12% Similarity=0.150 Sum_probs=50.1
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEec--C-HHHHhchHHHHhh-cCeeEEeCCcccCC
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVE--N-QEGVVNFDDILRE-TDSFMVARGDLGME 270 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIE--t-~~av~nldeI~~~-~DgI~IgrgDLg~e 270 (510)
+.+.+.|+|||-+||-.+.++++++++.... -.++.+.-|- | .++++++.+.++. +||+.+||.=+..+
T Consensus 166 ~~a~~~GAD~vkt~~~~~~e~~~~~~~~~~~--~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~ 238 (263)
T 1w8s_A 166 RIALELGADAMKIKYTGDPKTFSWAVKVAGK--VPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRR 238 (263)
T ss_dssp HHHHHHTCSEEEEECCSSHHHHHHHHHHTTT--SCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTST
T ss_pred HHHHHcCCCEEEEcCCCCHHHHHHHHHhCCC--CeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCc
Confidence 5678899999999997788888888876521 1345555453 3 4567788887776 79999998766554
No 54
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=90.89 E-value=1.1 Score=43.22 Aligned_cols=134 Identities=13% Similarity=0.036 Sum_probs=81.3
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccC---------CCCceEEEEecCHHHHhchHHHHhhcCeeEE---eCCcc
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPH---------AKNIQLMSKVENQEGVVNFDDILRETDSFMV---ARGDL 267 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~---------~~~~~IiakIEt~~av~nldeI~~~~DgI~I---grgDL 267 (510)
+.+.+.|+|+|.+..-.+ +++.++.+.+++. |..+.+-..-+|+ ++.++++++..|.|.+ .+|==
T Consensus 86 ~~~~~aGAd~itvH~ea~-~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp--~~~l~~~l~~~D~vlvMsv~pgfg 162 (237)
T 3cu2_A 86 KAVVANGANLVTLQLEQY-HDFALTIEWLAKQKTTYANQVYPVLIGACLCPETP--ISELEPYLDQIDVIQLLTLDPRNG 162 (237)
T ss_dssp HHHHHTTCSEEEEETTCT-TSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSC--GGGGTTTTTTCSEEEEESEETTTT
T ss_pred HHHHHcCCCEEEEecCCc-ccHHHHHHHHHhcccccccccCCceEEEEEeCCCh--HHHHHHHhhcCceeeeeeeccCcC
Confidence 556789999998876555 6677777888776 5444444444565 6778888888998877 55422
Q ss_pred cCCCCchhHHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHH--cCCceEEeccCCCCCCCHHH
Q 010443 268 GMEIPVEKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVL--DGTDCVMLSGESAAGAYPEI 343 (510)
Q Consensus 268 g~e~~~~~v~~~qk~ii~~~~~~--gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~--~G~D~imLs~Eta~G~yP~~ 343 (510)
|... .+....--+++-+...+. +.|+.+..-+ + ...+..++. .|+|++...+--... -|.+
T Consensus 163 gq~f-~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI----------~---~~~~~~~~~~~aGad~~VvGSaIf~~-d~~~ 227 (237)
T 3cu2_A 163 TKYP-SELILDRVIQVEKRLGNRRVEKLINIDGSM----------T---LELAKYFKQGTHQIDWLVSGSALFSG-ELKT 227 (237)
T ss_dssp EECC-HHHHHHHHHHHHHHHGGGGGGCEEEEESSC----------C---HHHHHHHHHSSSCCCCEEECGGGGSS-CHHH
T ss_pred Ceec-ChhHHHHHHHHHHHHHhcCCCceEEEECCc----------C---HHHHHHHHHhCCCCcEEEEeeHHhCC-CHHH
Confidence 2222 222222223333333222 4666554321 1 123456677 799999997544333 6889
Q ss_pred HHHHHHHH
Q 010443 344 AVKIMRRI 351 (510)
Q Consensus 344 ~V~~m~~i 351 (510)
+++.+++.
T Consensus 228 ~~~~l~~~ 235 (237)
T 3cu2_A 228 NLKVWKSS 235 (237)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88888653
No 55
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=90.58 E-value=2.4 Score=41.02 Aligned_cols=46 Identities=13% Similarity=0.123 Sum_probs=39.5
Q ss_pred HHHHHHHHHhCCCeE--EEeecCCCHHHHHHHHHHHHHHHHhcCCcEE
Q 010443 35 VPMLEKLLRAGMNVA--RFNFSHGTHEYQQETLNNLRAAMHNTQILCA 80 (510)
Q Consensus 35 ~~~l~~li~~G~~~~--RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~ 80 (510)
.+.+++.+++|++.+ .+|....+.++..+.++.++++++++|.|+-
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~vi 149 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLI 149 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEE
Confidence 678999999999999 9999988888888888888888888887653
No 56
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=90.45 E-value=2.7 Score=44.85 Aligned_cols=120 Identities=18% Similarity=0.178 Sum_probs=75.0
Q ss_pred cHHHHHhccCcCCCCEEEE--cCCCC---HHHHHHHHHHhccCCCCceEEEE-ecCHHHHhchHHHHhhcCeeEEeC--C
Q 010443 194 DKEDILRWGVPNNIDMIAL--SFVRK---GSDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRETDSFMVAR--G 265 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~--sfV~s---a~dv~~vr~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~~DgI~Igr--g 265 (510)
..+.+ +.+++.|+|+|.+ ++-.. .+.++.+++.+ .+..++++ +.|.+....+.+ .-+|+|.++. |
T Consensus 256 ~~~~a-~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~----~~~pvi~~~v~t~~~a~~l~~--aGad~I~vg~~~G 328 (514)
T 1jcn_A 256 DKYRL-DLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY----PHLQVIGGNVVTAAQAKNLID--AGVDGLRVGMGCG 328 (514)
T ss_dssp HHHHH-HHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHC----TTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSCS
T ss_pred hHHHH-HHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhC----CCCceEecccchHHHHHHHHH--cCCCEEEECCCCC
Confidence 45566 6678899999998 43333 24455555544 25778875 877776554443 1289999964 3
Q ss_pred cccCC-----CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 266 DLGME-----IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 266 DLg~e-----~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
--... .+.+ .+.....+-+.++..+.|+|.+.-+- ...|+..++..|||++|+..
T Consensus 329 ~~~~t~~~~~~g~~-~~~~~~~~~~~~~~~~ipVia~GGI~------------~~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 329 SICITQEVMACGRP-QGTAVYKVAEYARRFGVPIIADGGIQ------------TVGHVVKALALGASTVMMGS 388 (514)
T ss_dssp CCBTTBCCCSCCCC-HHHHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred cccccccccCCCcc-chhHHHHHHHHHhhCCCCEEEECCCC------------CHHHHHHHHHcCCCeeeECH
Confidence 11000 1211 23334555556667799998755432 34688999999999999964
No 57
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=90.32 E-value=1 Score=43.81 Aligned_cols=137 Identities=8% Similarity=0.031 Sum_probs=83.2
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCc--ccCCCCchhHH
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGD--LGMEIPVEKIF 277 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgD--Lg~e~~~~~v~ 277 (510)
+.+.+.|+|+|.+.. +..+++.++.+.+++.|....+...=.| -++.+++++...|.|++-.-+ +|-+-=.+...
T Consensus 103 ~~~~~aGAd~itvH~-Ea~~~~~~~i~~ir~~G~k~Gvalnp~T--p~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi~~~l 179 (246)
T 3inp_A 103 ESFAKAGATSIVFHP-EASEHIDRSLQLIKSFGIQAGLALNPAT--GIDCLKYVESNIDRVLIMSVNPGFGGQKFIPAML 179 (246)
T ss_dssp HHHHHHTCSEEEECG-GGCSCHHHHHHHHHTTTSEEEEEECTTC--CSGGGTTTGGGCSEEEEECSCTTC--CCCCTTHH
T ss_pred HHHHHcCCCEEEEcc-ccchhHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHhcCCEEEEeeecCCCCCcccchHHH
Confidence 445789999999975 3445777777778777765555433344 557788999889988874222 23221112333
Q ss_pred HHHHHHHHHHHHcC--CCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHH
Q 010443 278 LAQKMMIYKCNLVG--KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRIC 352 (510)
Q Consensus 278 ~~qk~ii~~~~~~g--kpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~ 352 (510)
.--+++-+.+.+.| .++-+..- -.|.. +..++..|+|.++...--.-..-|.++++.+++.+
T Consensus 180 ~KI~~lr~~~~~~~~~~~I~VDGG--------I~~~t-----i~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~i 243 (246)
T 3inp_A 180 DKAKEISKWISSTDRDILLEIDGG--------VNPYN-----IAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDEL 243 (246)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEESS--------CCTTT-----HHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEECC--------cCHHH-----HHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHHHH
Confidence 33344444445555 34433221 13333 46778899999998743333467999998887754
No 58
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=89.94 E-value=2.2 Score=42.85 Aligned_cols=109 Identities=13% Similarity=0.217 Sum_probs=67.9
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccCCCC-chhHHH
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIP-VEKIFL 278 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~-~~~v~~ 278 (510)
+.+++.|+|+|.+++-...+.++.+++ ..++++.++-+.+-...+.+ .-+|+|.+--.+.|-..| ...+..
T Consensus 96 ~~~~~~g~d~V~l~~g~p~~~~~~l~~------~g~~v~~~v~s~~~a~~a~~--~GaD~i~v~g~~~GG~~G~~~~~~l 167 (326)
T 3bo9_A 96 KVCIEEKVPVVTFGAGNPTKYIRELKE------NGTKVIPVVASDSLARMVER--AGADAVIAEGMESGGHIGEVTTFVL 167 (326)
T ss_dssp HHHHHTTCSEEEEESSCCHHHHHHHHH------TTCEEEEEESSHHHHHHHHH--TTCSCEEEECTTSSEECCSSCHHHH
T ss_pred HHHHHCCCCEEEECCCCcHHHHHHHHH------cCCcEEEEcCCHHHHHHHHH--cCCCEEEEECCCCCccCCCccHHHH
Confidence 566789999999988776665555554 25788999877665544322 127999993222222222 112211
Q ss_pred HHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 279 AQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 279 ~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
+ +++ .+..+.|++.+.-+- ...|+..++..|+|++++.
T Consensus 168 l-~~i---~~~~~iPviaaGGI~------------~~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 168 V-NKV---SRSVNIPVIAAGGIA------------DGRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp H-HHH---HHHCSSCEEEESSCC------------SHHHHHHHHHHTCSEEEES
T ss_pred H-HHH---HHHcCCCEEEECCCC------------CHHHHHHHHHhCCCEEEec
Confidence 1 122 234589999876532 2457788888999999986
No 59
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=89.81 E-value=2.1 Score=41.98 Aligned_cols=150 Identities=17% Similarity=0.138 Sum_probs=98.3
Q ss_pred CCCChhcHHHHHhccCcC--CCCEEEEcCCCCHHHHHHHHHHhccCCC-CceEEEEecCHHHHhchHH--------HHhh
Q 010443 188 PTLTEKDKEDILRWGVPN--NIDMIALSFVRKGSDLVNVRKVLGPHAK-NIQLMSKVENQEGVVNFDD--------ILRE 256 (510)
Q Consensus 188 p~lt~~D~~di~~~a~~~--g~d~I~~sfV~sa~dv~~vr~~l~~~~~-~~~IiakIEt~~av~nlde--------I~~~ 256 (510)
|..|+.|.+.+.+-+.+. ++..|+++ +..+..+++.+...+. .+++.+-|=-|.|-...+. |..-
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV~----p~~v~~a~~~L~~~g~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~G 98 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICIY----PRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAYG 98 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEECC----GGGHHHHHHHHHHTTCTTSEEEEEESTTTCCSCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEC----HHHHHHHHHHhhhcCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHHcC
Confidence 566888888887788888 89988875 5578888888863234 6788888855554433332 2222
Q ss_pred cCeeEE--eCCcccCCCCchhHHHHHHHHHHHHHHcCCCe--EEehhhhHhhhcCCCCChHh-HHHHHH-HHHcCCceEE
Q 010443 257 TDSFMV--ARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPV--VTATQMLESMIKSPRPTRAE-ATDVAN-AVLDGTDCVM 330 (510)
Q Consensus 257 ~DgI~I--grgDLg~e~~~~~v~~~qk~ii~~~~~~gkpv--ivaTqmLeSM~~~~~PtraE-v~Dv~~-av~~G~D~im 330 (510)
+|.|-+ ..|-| .+=.++.+..-.+.+.++|..+|+|+ |+.|-.| +..| +..... ++..|+|.|=
T Consensus 99 AdEIDmVinig~l-~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~d~e~i~~a~~ia~eaGADfVK 168 (260)
T 1p1x_A 99 ADEVDVVFPYRAL-MAGNEQVGFDLVKACKEACAAANVLLKVIIETGEL---------KDEALIRKASEISIKAGADFIK 168 (260)
T ss_dssp CSEEEEECCHHHH-HTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHH---------CSHHHHHHHHHHHHHTTCSEEE
T ss_pred CCEEEEeccHHhh-hCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccC---------CcHHHHHHHHHHHHHhCCCEEE
Confidence 454422 22221 11113566777778888998888885 8877766 4556 433333 7789999986
Q ss_pred eccCCCCCCC----HHHHHHHHHHHHHHH
Q 010443 331 LSGESAAGAY----PEIAVKIMRRICIEA 355 (510)
Q Consensus 331 Ls~Eta~G~y----P~~~V~~m~~i~~~a 355 (510)
-| .|.. -.+.|+.|++.+++.
T Consensus 169 TS----TGf~~~gAt~e~v~lm~~~I~~~ 193 (260)
T 1p1x_A 169 TS----TGKVAVNATPESARIMMEVIRDM 193 (260)
T ss_dssp CC----CSCSSCCCCHHHHHHHHHHHHHH
T ss_pred eC----CCCCCCCCCHHHHHHHHHHHHHh
Confidence 55 4554 569999999987753
No 60
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=89.44 E-value=1.6 Score=44.87 Aligned_cols=116 Identities=18% Similarity=0.251 Sum_probs=70.4
Q ss_pred hhcHHHHHhccCcCCCCEEEE--cCCCCH---HHHHHHHHHhccCCCCceEEEE-ecCHHHHhchHHHHhhcCeeEEeCC
Q 010443 192 EKDKEDILRWGVPNNIDMIAL--SFVRKG---SDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRETDSFMVARG 265 (510)
Q Consensus 192 ~~D~~di~~~a~~~g~d~I~~--sfV~sa---~dv~~vr~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~~DgI~Igrg 265 (510)
+.+.+.+ +.+++.|+|+|.+ ++-.+. +.++.+|+.. .++.|+++ +-|++....+.+ .-+|+|.++-+
T Consensus 99 ~~~~e~~-~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~----~~~~Vi~G~V~T~e~A~~a~~--aGaD~I~Vg~g 171 (361)
T 3r2g_A 99 ENELQRA-EALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLL----GSRCIMAGNVATYAGADYLAS--CGADIIKAGIG 171 (361)
T ss_dssp HHHHHHH-HHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHH----TTCEEEEEEECSHHHHHHHHH--TTCSEEEECCS
T ss_pred HHHHHHH-HHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhc----CCCeEEEcCcCCHHHHHHHHH--cCCCEEEEcCC
Confidence 4455566 7788999999988 333332 3455555433 35789996 888776544322 23899999532
Q ss_pred cccCC--------CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 266 DLGME--------IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 266 DLg~e--------~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
- |-. .+.+ |-..+..|.++.+|+|.+.-+- .-.|+..|+..|||++|+.
T Consensus 172 ~-G~~~~tr~~~g~g~p-----~l~aI~~~~~~~~PVIAdGGI~------------~~~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 172 G-GSVCSTRIKTGFGVP-----MLTCIQDCSRADRSIVADGGIK------------TSGDIVKALAFGADFVMIG 228 (361)
T ss_dssp S-SSCHHHHHHHCCCCC-----HHHHHHHHTTSSSEEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred C-CcCccccccCCccHH-----HHHHHHHHHHhCCCEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 1 110 1111 3334444444444888654322 2468899999999999994
No 61
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=89.44 E-value=12 Score=38.37 Aligned_cols=159 Identities=9% Similarity=0.126 Sum_probs=108.0
Q ss_pred CCChhcHHHHHhccCcCCCCEEEE-cCCCCHHHHHHHHHHhccCCCCceEEEEec-CHHHHhchHHHHhhc--C--eeEE
Q 010443 189 TLTEKDKEDILRWGVPNNIDMIAL-SFVRKGSDLVNVRKVLGPHAKNIQLMSKVE-NQEGVVNFDDILRET--D--SFMV 262 (510)
Q Consensus 189 ~lt~~D~~di~~~a~~~g~d~I~~-sfV~sa~dv~~vr~~l~~~~~~~~IiakIE-t~~av~nldeI~~~~--D--gI~I 262 (510)
.++..|+..|.+...+.|++.|=+ +++-++.|.+.++++... .++..+.+-.= +..+++..-+-+..+ | .+++
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~di~~a~~al~~ag~~~v~if~ 108 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKT-ITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTFI 108 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTT-CSSSEEEEEEESSHHHHHHHHHHHTTSSSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHh-CCCCeEEEEecCCHHHHHHHHHHHhhCCCCEEEEEe
Confidence 468888888867777799999866 456678899998887653 35555555542 455554332222222 3 4666
Q ss_pred eCCccc----CCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEeccCCCC
Q 010443 263 ARGDLG----MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGESAA 337 (510)
Q Consensus 263 grgDLg----~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~Eta~ 337 (510)
+-.|+- .....+++...-.++++.|+.+|..|.+..+ ...+-+...+.+++. +...|+|.|.|. +|.=
T Consensus 109 ~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~e------d~~r~~~~~~~~~~~~~~~~Ga~~i~l~-DT~G 181 (370)
T 3rmj_A 109 ATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCE------DALRSEIDFLAEICGAVIEAGATTINIP-DTVG 181 (370)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHHTCCEEEEE-CSSS
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecC------CCCccCHHHHHHHHHHHHHcCCCEEEec-CccC
Confidence 666653 2345567777778899999999998866432 122333445566665 567899999997 8888
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 010443 338 GAYPEIAVKIMRRICIEA 355 (510)
Q Consensus 338 G~yP~~~V~~m~~i~~~a 355 (510)
.-.|.++-+.+..+.+..
T Consensus 182 ~~~P~~~~~lv~~l~~~~ 199 (370)
T 3rmj_A 182 YSIPYKTEEFFRELIAKT 199 (370)
T ss_dssp CCCHHHHHHHHHHHHHHS
T ss_pred CcCHHHHHHHHHHHHHhC
Confidence 888999988888877654
No 62
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=89.18 E-value=4.9 Score=40.46 Aligned_cols=159 Identities=14% Similarity=0.130 Sum_probs=102.7
Q ss_pred CCChhcHHHHHhccCcCCCCEEEEcC-CCCHHHHHHHHHHhccCCCCceEEEEe-cCHHHHhchHHHHhh--cC--eeEE
Q 010443 189 TLTEKDKEDILRWGVPNNIDMIALSF-VRKGSDLVNVRKVLGPHAKNIQLMSKV-ENQEGVVNFDDILRE--TD--SFMV 262 (510)
Q Consensus 189 ~lt~~D~~di~~~a~~~g~d~I~~sf-V~sa~dv~~vr~~l~~~~~~~~IiakI-Et~~av~nldeI~~~--~D--gI~I 262 (510)
.++..|+..|.+...+.|++.|=+.| +-+++|.+.++++.+. ..++.+.+-. =+.++++..-+-+.. .| .+++
T Consensus 24 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~ 102 (325)
T 3eeg_A 24 QLNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKA-VTRPTICALTRAKEADINIAGEALRFAKRSRIHTGI 102 (325)
T ss_dssp -CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHH-CCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHh-CCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEe
Confidence 35667777775777779999987754 5577787777665543 2566666664 345566543222222 23 3566
Q ss_pred eCCcccC----CCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHH-HcCCceEEeccCCCC
Q 010443 263 ARGDLGM----EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAV-LDGTDCVMLSGESAA 337 (510)
Q Consensus 263 grgDLg~----e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av-~~G~D~imLs~Eta~ 337 (510)
+-.|+-. ....++.....+.+++.|+++|+.+.+..+ ...+-+...+.+++.++ ..|+|.|.|. +|.=
T Consensus 103 s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l~-DT~G 175 (325)
T 3eeg_A 103 GSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE------DAGRADQAFLARMVEAVIEAGADVVNIP-DTTG 175 (325)
T ss_dssp ECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE------TGGGSCHHHHHHHHHHHHHHTCSEEECC-BSSS
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcc------ccccchHHHHHHHHHHHHhcCCCEEEec-CccC
Confidence 6555432 233456666667889999999999866432 12233455566777754 4599999987 8888
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 010443 338 GAYPEIAVKIMRRICIEA 355 (510)
Q Consensus 338 G~yP~~~V~~m~~i~~~a 355 (510)
.-.|.++-+.+..+.++.
T Consensus 176 ~~~P~~v~~lv~~l~~~~ 193 (325)
T 3eeg_A 176 YMLPWQYGERIKYLMDNV 193 (325)
T ss_dssp CCCHHHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHHHHhC
Confidence 889999988888876654
No 63
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=89.11 E-value=1.8 Score=41.44 Aligned_cols=137 Identities=12% Similarity=0.068 Sum_probs=83.1
Q ss_pred hccCcCCCCEEEEcCCC-CHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEe---CCcccCCCCchh
Q 010443 200 RWGVPNNIDMIALSFVR-KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVA---RGDLGMEIPVEK 275 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~-sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~Ig---rgDLg~e~~~~~ 275 (510)
+.+.+.|+|+|.+..-. + .++.++.+.+++.|..+.+...-.|+ ++.+++++...|.+++- +|==|.... +.
T Consensus 74 ~~~~~aGAd~itvh~Ea~~-~~~~~~i~~i~~~G~k~gv~lnp~tp--~~~~~~~l~~~D~VlvmsV~pGfggQ~f~-~~ 149 (231)
T 3ctl_A 74 AQLARAGADFITLHPETIN-GQAFRLIDEIRRHDMKVGLILNPETP--VEAMKYYIHKADKITVMTVDPGFAGQPFI-PE 149 (231)
T ss_dssp HHHHHHTCSEEEECGGGCT-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCTTCSSCCCC-TT
T ss_pred HHHHHcCCCEEEECcccCC-ccHHHHHHHHHHcCCeEEEEEECCCc--HHHHHHHHhcCCEEEEeeeccCcCCcccc-HH
Confidence 44577899999988544 3 46778888888777665555445554 77788888889988753 332233332 22
Q ss_pred HHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec-cCCCCCCC-HHHHHHHHHHH
Q 010443 276 IFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS-GESAAGAY-PEIAVKIMRRI 351 (510)
Q Consensus 276 v~~~qk~ii~~~~~~--gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs-~Eta~G~y-P~~~V~~m~~i 351 (510)
...--+++-+...+. +.++.+..- -.|.. +..++..|+|.+... +--..... |.++++.+++.
T Consensus 150 ~l~kI~~lr~~~~~~~~~~~I~VdGG--------I~~~~-----~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l~~~ 216 (231)
T 3ctl_A 150 MLDKLAELKAWREREGLEYEIEVDGS--------CNQAT-----YEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTAQ 216 (231)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEEESC--------CSTTT-----HHHHHHHTCCEEEECTTTTGGGCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCceEEEECC--------cCHHH-----HHHHHHcCCCEEEEccHHHhCCCCcHHHHHHHHHHH
Confidence 222223343444433 455544322 12333 255667799999987 54433335 99999998875
Q ss_pred HH
Q 010443 352 CI 353 (510)
Q Consensus 352 ~~ 353 (510)
+.
T Consensus 217 ~~ 218 (231)
T 3ctl_A 217 IL 218 (231)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 64
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=89.05 E-value=1.8 Score=40.90 Aligned_cols=135 Identities=8% Similarity=0.064 Sum_probs=79.8
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHh---hcCeeEEeCCcc---cCCCCc
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR---ETDSFMVARGDL---GMEIPV 273 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~---~~DgI~IgrgDL---g~e~~~ 273 (510)
+.+.+.|+|+|.+..-.+.+.+.++.+.+++.| ..++.-+....-++.+.+++. .+|.+.+..-.- |...+.
T Consensus 81 ~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g--~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~ 158 (228)
T 1h1y_A 81 EPLAKAGASGFTFHIEVSRDNWQELIQSIKAKG--MRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMP 158 (228)
T ss_dssp HHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTT--CEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCG
T ss_pred HHHHHcCCCEEEECCCCcccHHHHHHHHHHHcC--CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCH
Confidence 344668999999887766655133334444443 455566633334677888988 789998864222 233333
Q ss_pred hhHHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHH
Q 010443 274 EKIFLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRIC 352 (510)
Q Consensus 274 ~~v~~~qk~ii~~~~~~-gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~ 352 (510)
..+..+ -+..+.. +.|+.++.-+ .|. .+..++..|+|++....--.....|.++++.+++.+
T Consensus 159 ~~l~~i----~~~~~~~~~~pi~v~GGI--------~~~-----ni~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~~~~ 221 (228)
T 1h1y_A 159 EMMEKV----RALRKKYPSLDIEVDGGL--------GPS-----TIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSV 221 (228)
T ss_dssp GGHHHH----HHHHHHCTTSEEEEESSC--------STT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHH----HHHHHhcCCCCEEEECCc--------CHH-----HHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHHHH
Confidence 333222 1122222 7788765432 232 234455559999999754434457999999988765
Q ss_pred H
Q 010443 353 I 353 (510)
Q Consensus 353 ~ 353 (510)
+
T Consensus 222 ~ 222 (228)
T 1h1y_A 222 E 222 (228)
T ss_dssp H
T ss_pred H
Confidence 4
No 65
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=88.71 E-value=13 Score=36.79 Aligned_cols=197 Identities=15% Similarity=0.160 Sum_probs=121.4
Q ss_pred CCChhcHHHHHhccCcCCCCEEEEcC-CCCHHHHHHHHHHhccCCCCceEEEEecC-HHHHhchHHHHhh--cC--eeEE
Q 010443 189 TLTEKDKEDILRWGVPNNIDMIALSF-VRKGSDLVNVRKVLGPHAKNIQLMSKVEN-QEGVVNFDDILRE--TD--SFMV 262 (510)
Q Consensus 189 ~lt~~D~~di~~~a~~~g~d~I~~sf-V~sa~dv~~vr~~l~~~~~~~~IiakIEt-~~av~nldeI~~~--~D--gI~I 262 (510)
.++..|+..|.+...+.|++.|=+-| ..++.|.+.++.+.+. .+++.+.+..-+ ..+++..-+-+.. .| .+++
T Consensus 23 ~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~~~~~~di~~a~~~~~~ag~~~v~i~~ 101 (293)
T 3ewb_X 23 NFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKA-IKHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIFL 101 (293)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHH-CCSSEEEEEEESSHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHh-cCCCEEEEEecCCHHHHHHHHHHHhhcCCCEEEEEe
Confidence 45778888876777789999987644 4466677777665543 356777777643 3444333222211 23 4566
Q ss_pred eCCccc----CCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEeccCCCC
Q 010443 263 ARGDLG----MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGESAA 337 (510)
Q Consensus 263 grgDLg----~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~Eta~ 337 (510)
+-.|+- .....++.....+++++.|+++|..|.+... ..++-+...+.+++. +...|+|.|.|. +|.=
T Consensus 102 ~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l~-DT~G 174 (293)
T 3ewb_X 102 ATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPE------DATRSDRAFLIEAVQTAIDAGATVINIP-DTVG 174 (293)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHTTCCEEEEE-CSSS
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEec------cCCCCCHHHHHHHHHHHHHcCCCEEEec-CCCC
Confidence 655653 2345567777888999999999999876432 222334455666666 566899999997 8877
Q ss_pred CCCHHHHHHHHHHHHHHHhcc--cchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCc
Q 010443 338 GAYPEIAVKIMRRICIEAESS--LDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGG 405 (510)
Q Consensus 338 G~yP~~~V~~m~~i~~~aE~~--~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~T~sG 405 (510)
.-.|.++-+.++.+....-.. ....-+++ . ...+|.+-..+|-..+|+ .|=-|-.|
T Consensus 175 ~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~H-------n----d~Gla~AN~laA~~aGa~-~vd~sv~G 232 (293)
T 3ewb_X 175 YTNPTEFGQLFQDLRREIKQFDDIIFASHCH-------D----DLGMATANALAAIENGAR-RVEGTING 232 (293)
T ss_dssp CCCHHHHHHHHHHHHHHCTTGGGSEEEEECB-------C----TTSCHHHHHHHHHHTTCC-EEEEBGGG
T ss_pred CCCHHHHHHHHHHHHHhcCCccCceEEEEeC-------C----CcChHHHHHHHHHHhCCC-EEEeeccc
Confidence 788999888888776543210 00000111 0 112445555667778888 45555444
No 66
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=87.99 E-value=1.9 Score=40.03 Aligned_cols=135 Identities=7% Similarity=0.008 Sum_probs=76.7
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEE-e--CCcccCCCCchhH
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMV-A--RGDLGMEIPVEKI 276 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~I-g--rgDLg~e~~~~~v 276 (510)
+.+.+.|+|+|.+.--.. ++..++.+.+++.| ..++.-+.+....+.+.++...+|.+++ + +|==|...+...+
T Consensus 78 ~~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~g--~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~~~~ 154 (220)
T 2fli_A 78 EAFAQAGADIMTIHTEST-RHIHGALQKIKAAG--MKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECL 154 (220)
T ss_dssp HHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTT--SEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGGGH
T ss_pred HHHHHcCCCEEEEccCcc-ccHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccCHHHH
Confidence 445678999998865544 45555555565544 4455556333344556666666898865 2 2211333333222
Q ss_pred HHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHH
Q 010443 277 FLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRI 351 (510)
Q Consensus 277 ~~~qk~ii~~~~~~--gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i 351 (510)
.. -+++-+.+... +.|++++-- + .| .++..+...|+|++..+.--..+..|.++++.+.+.
T Consensus 155 ~~-i~~~~~~~~~~~~~~~i~v~GG-I-------~~-----~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~~ 217 (220)
T 2fli_A 155 EK-VATVAKWRDEKGLSFDIEVDGG-V-------DN-----KTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTA 217 (220)
T ss_dssp HH-HHHHHHHHHHTTCCCEEEEESS-C-------CT-----TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHhcCCCceEEEECc-C-------CH-----HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 22 22333333333 567665432 1 23 344556666999999976655567799998887654
No 67
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=87.88 E-value=0.6 Score=44.66 Aligned_cols=134 Identities=9% Similarity=0.072 Sum_probs=75.6
Q ss_pred hccCcCCCCEEEEcCC--CCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCccc--C-CCCch
Q 010443 200 RWGVPNNIDMIALSFV--RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLG--M-EIPVE 274 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV--~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg--~-e~~~~ 274 (510)
+.+.+.|+|+|.++.- .+ ++..++.+.+.+.|..+.+...-.|+ ++.+.++++.+|.|.++.-.-| - ... +
T Consensus 79 ~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~g~~~gv~~~p~t~--~e~~~~~~~~~D~v~~msv~pg~ggq~~~-~ 154 (230)
T 1tqj_A 79 EDFAKAGADIISVHVEHNAS-PHLHRTLCQIRELGKKAGAVLNPSTP--LDFLEYVLPVCDLILIMSVNPGFGGQSFI-P 154 (230)
T ss_dssp HHHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCC----CCCC-G
T ss_pred HHHHHcCCCEEEECcccccc-hhHHHHHHHHHHcCCcEEEEEeCCCc--HHHHHHHHhcCCEEEEEEeccccCCccCc-H
Confidence 4457789999999865 33 45555555565555443333333554 5567888888998877743332 1 122 2
Q ss_pred hHHHHHHHHHHHHHH--cCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHH
Q 010443 275 KIFLAQKMMIYKCNL--VGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRR 350 (510)
Q Consensus 275 ~v~~~qk~ii~~~~~--~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~ 350 (510)
....--+++-+.+.+ .+.|+.+..- -.+.. +......|+|++...+--.....|.++++.+++
T Consensus 155 ~~~~~i~~lr~~~~~~~~~~~I~v~GG--------I~~~~-----~~~~~~aGad~vvvGSai~~a~d~~~~~~~l~~ 219 (230)
T 1tqj_A 155 EVLPKIRALRQMCDERGLDPWIEVDGG--------LKPNN-----TWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRN 219 (230)
T ss_dssp GGHHHHHHHHHHHHHHTCCCEEEEESS--------CCTTT-----THHHHHHTCCEEEESHHHHTSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEECC--------cCHHH-----HHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHH
Confidence 222222333333333 3667655322 12222 244555699999997544444568888888765
No 68
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=87.87 E-value=2.1 Score=41.95 Aligned_cols=122 Identities=14% Similarity=0.144 Sum_probs=81.3
Q ss_pred hccCcCCCCEEEEcCCC--C---------HHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCccc
Q 010443 200 RWGVPNNIDMIALSFVR--K---------GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLG 268 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~--s---------a~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg 268 (510)
+.+.+.|+|.|....-. + .+.++.+++++.+. .+.+++-+-.+..++-+.+. .|.+-||.+++.
T Consensus 44 ~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~~---vd~~kIga~~~~ 118 (262)
T 1zco_A 44 EFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEVMDTRHVELVAKY---SDILQIGARNSQ 118 (262)
T ss_dssp HHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCCGGGHHHHHHH---CSEEEECGGGTT
T ss_pred HHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEeeCCHHhHHHHHhh---CCEEEECccccc
Confidence 56677899988765322 1 78888888888664 58899988888877666554 799999987663
Q ss_pred CCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHc-CCceEEec--cCCCCCCCHHHHH
Q 010443 269 MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD-GTDCVMLS--GESAAGAYPEIAV 345 (510)
Q Consensus 269 ~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~-G~D~imLs--~Eta~G~yP~~~V 345 (510)
- ..+++++.+.||||++.|.| .+|-.|+.+.+..+.. |.+-++|- |=+..-+||.+.+
T Consensus 119 n-----------~~ll~~~a~~~kPV~lk~G~--------~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v 179 (262)
T 1zco_A 119 N-----------FELLKEVGKVENPVLLKRGM--------GNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTL 179 (262)
T ss_dssp C-----------HHHHHHHTTSSSCEEEECCT--------TCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBC
T ss_pred C-----------HHHHHHHHhcCCcEEEecCC--------CCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhc
Confidence 2 22344455589999996543 2577888887776654 55444442 2223336776543
No 69
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=87.53 E-value=5 Score=37.40 Aligned_cols=131 Identities=13% Similarity=0.026 Sum_probs=71.8
Q ss_pred ccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHH
Q 010443 201 WGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQ 280 (510)
Q Consensus 201 ~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~q 280 (510)
.+.+.|+|+|.+..-. ..+..+++... +..+.+-+.|.+-+... ...-+|.|+++..--+...+- .-+.-.
T Consensus 83 ~a~~~gad~v~l~~~~--~~~~~~~~~~~----~~~ig~sv~t~~~~~~a--~~~gaD~i~~~~~f~~~~~~g-~~~~~~ 153 (221)
T 1yad_A 83 IALFSTIHRVQLPSGS--FSPKQIRARFP----HLHIGRSVHSLEEAVQA--EKEDADYVLFGHVFETDCKKG-LEGRGV 153 (221)
T ss_dssp HHHTTTCCEEEECTTS--CCHHHHHHHCT----TCEEEEEECSHHHHHHH--HHTTCSEEEEECCC-----------CHH
T ss_pred HHHHcCCCEEEeCCCc--cCHHHHHHHCC----CCEEEEEcCCHHHHHHH--HhCCCCEEEECCccccCCCCC-CCCCCH
Confidence 3567899999998542 34555665442 34555556554433221 223379999986311111100 001111
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHH
Q 010443 281 KMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 353 (510)
Q Consensus 281 k~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 353 (510)
+.+-+.++..+.|++.+.-+ +. .++..++..|+|++.+++--...+.|.++++.+.+.++
T Consensus 154 ~~l~~~~~~~~~pvia~GGI----------~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 213 (221)
T 1yad_A 154 SLLSDIKQRISIPVIAIGGM----------TP---DRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLK 213 (221)
T ss_dssp HHHHHHHHHCCSCEEEESSC----------CG---GGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEECCC----------CH---HHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHH
Confidence 22333344458998876542 32 35566777899999997654434557788777766544
No 70
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=87.46 E-value=5.4 Score=40.56 Aligned_cols=109 Identities=13% Similarity=0.197 Sum_probs=65.4
Q ss_pred hccCcCCCCEEEEcCCC-CHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEE-eCC---cccCCCC--
Q 010443 200 RWGVPNNIDMIALSFVR-KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMV-ARG---DLGMEIP-- 272 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~-sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~I-grg---DLg~e~~-- 272 (510)
+.+.+.|+|+|.+++-. +.+.++.+++ .++.++.++-|.+-...+.+ .-+|+|.+ ++. -.|...+
T Consensus 116 ~~~~~~g~~~V~~~~g~~~~~~i~~~~~------~g~~v~~~v~t~~~a~~a~~--~GaD~i~v~g~~~GGh~g~~~~~~ 187 (369)
T 3bw2_A 116 AVLLDDPVPVVSFHFGVPDREVIARLRR------AGTLTLVTATTPEEARAVEA--AGADAVIAQGVEAGGHQGTHRDSS 187 (369)
T ss_dssp HHHHHSCCSEEEEESSCCCHHHHHHHHH------TTCEEEEEESSHHHHHHHHH--TTCSEEEEECTTCSEECCCSSCCG
T ss_pred HHHHhcCCCEEEEeCCCCcHHHHHHHHH------CCCeEEEECCCHHHHHHHHH--cCCCEEEEeCCCcCCcCCCccccc
Confidence 66788999999998754 3466666654 24678888877654332221 22799999 542 1122111
Q ss_pred ------chhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 273 ------VEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 273 ------~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
...+. .-+++ ....++|++.+.-+- + -.++..++..|+|++++.
T Consensus 188 ~~~~~~~~~~~-~l~~i---~~~~~iPViaaGGI~---------~---~~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 188 EDDGAGIGLLS-LLAQV---REAVDIPVVAAGGIM---------R---GGQIAAVLAAGADAAQLG 237 (369)
T ss_dssp GGTTCCCCHHH-HHHHH---HHHCSSCEEEESSCC---------S---HHHHHHHHHTTCSEEEES
T ss_pred ccccccccHHH-HHHHH---HHhcCceEEEECCCC---------C---HHHHHHHHHcCCCEEEEC
Confidence 11111 11222 223589999876532 2 246677888999999986
No 71
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=87.10 E-value=4.5 Score=39.36 Aligned_cols=128 Identities=13% Similarity=0.070 Sum_probs=79.5
Q ss_pred ChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHH----------hchHHHHhh-cCe
Q 010443 191 TEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGV----------VNFDDILRE-TDS 259 (510)
Q Consensus 191 t~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av----------~nldeI~~~-~Dg 259 (510)
+..|.+.+.+.+.+.|++.|+++ +--+..+. ..++.++.++++.-++ ...++.++. +|+
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~----~~~v~~~~------~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~ 108 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ----RGIAEKYY------DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGASA 108 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC----HHHHHHHC------CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCSE
T ss_pred chhhHHHHHHHHHhhCCCEEEEC----HHHHHHhh------cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCCE
Confidence 56676666688899999999988 33444433 2346677777665544 334555544 676
Q ss_pred eEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhh-hcCCCCChHhHHHH-HHHHHcCCceEEec
Q 010443 260 FMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESM-IKSPRPTRAEATDV-ANAVLDGTDCVMLS 332 (510)
Q Consensus 260 I~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM-~~~~~PtraEv~Dv-~~av~~G~D~imLs 332 (510)
|-+ |-.++ +-....+...-+++...|+++|.|+|+=+. +.-- ..+ ..|..++... .-+...|+|.+=.+
T Consensus 109 v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~-~~G~~~~~-~~s~~~i~~a~~~a~~~GAD~vkt~ 179 (263)
T 1w8s_A 109 VGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVESF-PRGGKVVN-ETAPEIVAYAARIALELGADAMKIK 179 (263)
T ss_dssp EEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEEEC-CCSTTCCC-TTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEEee-CCCCcccc-CCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 654 44444 334456677778999999999999886210 0000 000 0055566654 44788999998887
No 72
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=87.02 E-value=1.3 Score=42.44 Aligned_cols=147 Identities=14% Similarity=0.054 Sum_probs=94.1
Q ss_pred CCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhc-------hHHHHhhcCee
Q 010443 188 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVN-------FDDILRETDSF 260 (510)
Q Consensus 188 p~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~n-------ldeI~~~~DgI 260 (510)
|..|+.|.+.+.+-+.+.|++.|+++ +..+..+++.+.. +++.+-|=-|.|-.+ .++|..-+|.|
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~~a~~~l~g----v~v~tvigFP~G~~~~~~k~~E~~~i~~GAdEI 83 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCVN----PIYAPVVRPLLRK----VKLCVVADFPFGALPTASRIALVSRLAEVADEI 83 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHGGGCSS----SEEEEEESTTTCCSCHHHHHHHHHHHTTTCSEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhCC----CeEEEEeCCCCCCCchHHHHHHHHHHHCCCCEE
Confidence 56688888888788889999999986 4577777777742 777777754444322 33322224544
Q ss_pred EE--eCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEeccCCCC
Q 010443 261 MV--ARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGESAA 337 (510)
Q Consensus 261 ~I--grgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~Eta~ 337 (510)
-+ ..|-| .+=.++.+..-.+.+.++|...+.|||+.|-.| |..|+..... +...|+|.|=-| .
T Consensus 84 D~Vinig~~-~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~L---------t~eei~~a~~ia~eaGADfVKTS----T 149 (226)
T 1vcv_A 84 DVVAPIGLV-KSRRWAEVRRDLISVVGAAGGRVVKVITEEPYL---------RDEERYTLYDIIAEAGAHFIKSS----T 149 (226)
T ss_dssp EEECCHHHH-HTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---------CHHHHHHHHHHHHHHTCSEEECC----C
T ss_pred EEecchhhh-cCCCHHHHHHHHHHHHHHHcCCCceEEEeccCC---------CHHHHHHHHHHHHHcCCCEEEeC----C
Confidence 22 11211 011124555555667777766677888877655 6677766666 778899998665 3
Q ss_pred CCC--------------HHHHHHHHHHHHHHHh
Q 010443 338 GAY--------------PEIAVKIMRRICIEAE 356 (510)
Q Consensus 338 G~y--------------P~~~V~~m~~i~~~aE 356 (510)
|.. -.+.|+.|++.++++-
T Consensus 150 Gf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g 182 (226)
T 1vcv_A 150 GFAEEAYAARQGNPVHSTPERAAAIARYIKEKG 182 (226)
T ss_dssp SCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHT
T ss_pred CCCccccccccCCCCCCCHHHHHHHHHHHHHhC
Confidence 443 4678899998877654
No 73
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=86.15 E-value=3 Score=48.42 Aligned_cols=127 Identities=14% Similarity=0.185 Sum_probs=73.6
Q ss_pred hhcHHHHHhccCcCCCCEEEEcCC---------------CCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh
Q 010443 192 EKDKEDILRWGVPNNIDMIALSFV---------------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE 256 (510)
Q Consensus 192 ~~D~~di~~~a~~~g~d~I~~sfV---------------~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~ 256 (510)
..+...+.+.+.+.|+|+|.+.+- ++++.+.++-+.+++. .++.|++|+ ++ .+.++.++++.
T Consensus 647 ~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~-~~~Pv~vK~-~~-~~~~~~~~a~~ 723 (1025)
T 1gte_A 647 KNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA-VQIPFFAKL-TP-NVTDIVSIARA 723 (1025)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH-CSSCEEEEE-CS-CSSCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh-hCCceEEEe-CC-ChHHHHHHHHH
Confidence 444444436666789999999542 3444444444444432 257899998 22 34455566554
Q ss_pred -----cCeeEEe-----------------------CCcccCCCCchhHHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcC
Q 010443 257 -----TDSFMVA-----------------------RGDLGMEIPVEKIFLAQKMMIYKCNLV-GKPVVTATQMLESMIKS 307 (510)
Q Consensus 257 -----~DgI~Ig-----------------------rgDLg~e~~~~~v~~~qk~ii~~~~~~-gkpvivaTqmLeSM~~~ 307 (510)
+|+|.+. |...+---+....+.....+-+..++. +.|+|...-+-
T Consensus 724 ~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~------ 797 (1025)
T 1gte_A 724 AKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGID------ 797 (1025)
T ss_dssp HHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCC------
T ss_pred HHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcC------
Confidence 5999882 111111113334444344444444455 78988754432
Q ss_pred CCCChHhHHHHHHHHHcCCceEEecc
Q 010443 308 PRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 308 ~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
| ..|+..++..|+|++|+..
T Consensus 798 ---s---~~da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 798 ---S---AESGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp ---S---HHHHHHHHHTTCSEEEESH
T ss_pred ---C---HHHHHHHHHcCCCEEEEee
Confidence 2 4577888889999999964
No 74
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=85.52 E-value=3.2 Score=42.27 Aligned_cols=119 Identities=21% Similarity=0.195 Sum_probs=67.8
Q ss_pred cHHHHHhccCcC--CCCEEEEcCC--CCH---HHHHHHHHHhccCCCCceEEEE-ecCHHHHhchHHHHhh-cCeeEEeC
Q 010443 194 DKEDILRWGVPN--NIDMIALSFV--RKG---SDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRE-TDSFMVAR 264 (510)
Q Consensus 194 D~~di~~~a~~~--g~d~I~~sfV--~sa---~dv~~vr~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-~DgI~Igr 264 (510)
+.+.+ +..++. |+|.+.+..- .+. +.++.+|+.. .++.++++ +-|++... ...++ +|+|.++-
T Consensus 119 ~~~~~-~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~----~~~~vi~g~v~t~e~A~---~a~~aGaD~I~v~~ 190 (351)
T 2c6q_A 119 DFEQL-EQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRF----PQHTIMAGNVVTGEMVE---ELILSGADIIKVGI 190 (351)
T ss_dssp HHHHH-HHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHC----TTSEEEEEEECSHHHHH---HHHHTTCSEEEECS
T ss_pred HHHHH-HHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhc----CCCeEEEEeCCCHHHHH---HHHHhCCCEEEECC
Confidence 34444 444554 8998776432 222 2344444332 24666654 66654433 33333 79998864
Q ss_pred CcccCC-------CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 265 GDLGME-------IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 265 gDLg~e-------~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
|-=+.+ .+.+. ...-..+.+.++..+.|+|.+.-+. .-.|++.|+..|||++++..
T Consensus 191 g~G~~~~~r~~~g~~~p~-~~~l~~v~~~~~~~~ipvIa~GGI~------------~g~di~kAlalGA~~V~vG~ 253 (351)
T 2c6q_A 191 GPGSVCTTRKKTGVGYPQ-LSAVMECADAAHGLKGHIISDGGCS------------CPGDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp SCSTTBCHHHHHCBCCCH-HHHHHHHHHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred CCCcCcCccccCCCCccH-HHHHHHHHHHHhhcCCcEEEeCCCC------------CHHHHHHHHHcCCCceeccH
Confidence 320001 11111 2233556666777899999865543 35788999999999999854
No 75
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=85.50 E-value=2.9 Score=43.31 Aligned_cols=152 Identities=18% Similarity=0.226 Sum_probs=98.2
Q ss_pred HHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHH---hccCCCCceEEEEec--CHHHHhchHHHHhhcCeeEEeCCcccC
Q 010443 195 KEDILRWGVPNNIDMIALSFVRKGSDLVNVRKV---LGPHAKNIQLMSKVE--NQEGVVNFDDILRETDSFMVARGDLGM 269 (510)
Q Consensus 195 ~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~---l~~~~~~~~IiakIE--t~~av~nldeI~~~~DgI~IgrgDLg~ 269 (510)
.+.| ....+.|+|.|-++ |.+.++.+.++++ |...+.+++++|-|= -..++..+++.++..|.+=|-||.+|-
T Consensus 41 v~QI-~~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~ 118 (406)
T 4g9p_A 41 TAQV-LELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGR 118 (406)
T ss_dssp HHHH-HHHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCS
T ss_pred HHHH-HHHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCc
Confidence 3344 34467899998888 7788777776554 445677899999884 356888888999899999999999874
Q ss_pred CCCchhHHHHHHHHHHHHHHcCCCe--EE-----ehhhhHhhh----cCCCCChH-----h--HHH----HHHHHHcCC-
Q 010443 270 EIPVEKIFLAQKMMIYKCNLVGKPV--VT-----ATQMLESMI----KSPRPTRA-----E--ATD----VANAVLDGT- 326 (510)
Q Consensus 270 e~~~~~v~~~qk~ii~~~~~~gkpv--iv-----aTqmLeSM~----~~~~Ptra-----E--v~D----v~~av~~G~- 326 (510)
. .+...--+.++++|+++|+|+ ++ .-.+|+.+- ..|.|.-+ | +.- +.-+...|.
T Consensus 119 ~---~k~~e~~~~vv~~ak~~~~pIRIGVN~GSL~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~~~~~~f~ 195 (406)
T 4g9p_A 119 G---RHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLG 195 (406)
T ss_dssp T---HHHHHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred c---ccHHHHHHHHHHHHHHccCCceeccccccccHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHHHHHcCCC
Confidence 1 223344568999999999997 33 224454442 24555321 1 111 111223455
Q ss_pred -ceEEeccCCCCCCCHHHHHHHHHHHHHH
Q 010443 327 -DCVMLSGESAAGAYPEIAVKIMRRICIE 354 (510)
Q Consensus 327 -D~imLs~Eta~G~yP~~~V~~m~~i~~~ 354 (510)
|=+++|--.+ .+..+|+.-+.+.++
T Consensus 196 ~~~iviS~KaS---dv~~~i~aYr~la~~ 221 (406)
T 4g9p_A 196 EDKLVLSAKVS---KARDLVWVYRELARR 221 (406)
T ss_dssp GGGEEEEEECS---SHHHHHHHHHHHHHH
T ss_pred hhheEEEeecC---CHHHHHHHHHHHHHh
Confidence 6688886554 366666665555544
No 76
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=85.35 E-value=2.2 Score=39.26 Aligned_cols=131 Identities=13% Similarity=0.149 Sum_probs=72.5
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEe--cCHHHHhchHHHHh-hcCeeEEeCCcccCCCCchhH
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV--ENQEGVVNFDDILR-ETDSFMVARGDLGMEIPVEKI 276 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakI--Et~~av~nldeI~~-~~DgI~IgrgDLg~e~~~~~v 276 (510)
+.+.+.|+|+|.++.-...+.+.++++.+++.|..+ -++.. .|+.. .+.++.+ -.|.+-+.++-.+...+..-.
T Consensus 71 ~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~-gv~~~s~~~p~~--~~~~~~~~g~d~v~~~~~~~~~~~g~~~~ 147 (207)
T 3ajx_A 71 DIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGV-VVDLIGIEDKAT--RAQEVRALGAKFVEMHAGLDEQAKPGFDL 147 (207)
T ss_dssp HHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEE-EEECTTCSSHHH--HHHHHHHTTCSEEEEECCHHHHTSTTCCT
T ss_pred HHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCce-EEEEecCCChHH--HHHHHHHhCCCEEEEEecccccccCCCch
Confidence 445678999999876666678888888887655332 12222 13222 1222222 268773433332222222111
Q ss_pred HHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHH
Q 010443 277 FLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRR 350 (510)
Q Consensus 277 ~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~ 350 (510)
. +++-+.+.. ..|+++.--+ .|. .+..++..|+|++....--.....|.++++.+.+
T Consensus 148 ~---~~i~~~~~~-~~pi~v~GGI--------~~~-----~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~ 204 (207)
T 3ajx_A 148 N---GLLAAGEKA-RVPFSVAGGV--------KVA-----TIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRA 204 (207)
T ss_dssp H---HHHHHHHHH-TSCEEEESSC--------CGG-----GHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred H---HHHHHhhCC-CCCEEEECCc--------CHH-----HHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHH
Confidence 1 333333333 6787653221 122 4566788999999986544444568888877654
No 77
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=84.86 E-value=4.1 Score=39.17 Aligned_cols=37 Identities=16% Similarity=0.257 Sum_probs=27.9
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEe
Q 010443 281 KMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 331 (510)
Q Consensus 281 k~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imL 331 (510)
..+++.|+++|.|++- --.-.+++..|...|+|.+-+
T Consensus 117 ~~vi~~~~~~gi~~ip--------------Gv~TptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 117 PNTVRACQEIGIDIVP--------------GVNNPSTVEAALEMGLTTLKF 153 (232)
T ss_dssp HHHHHHHHHHTCEEEC--------------EECSHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEc--------------CCCCHHHHHHHHHcCCCEEEE
Confidence 4788899999999742 112245668889999999987
No 78
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=84.72 E-value=4.7 Score=40.20 Aligned_cols=107 Identities=10% Similarity=0.189 Sum_probs=64.6
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEE-eCCcccCCCC---chh
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMV-ARGDLGMEIP---VEK 275 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~I-grgDLg~e~~---~~~ 275 (510)
+.+.+.|+|+|.+++-...+.++.+++ . +++++.++-|.+....+ ...-+|+|.+ |+ .-|-..+ ...
T Consensus 90 ~~~~~~g~d~V~~~~g~p~~~~~~l~~----~--gi~vi~~v~t~~~a~~~--~~~GaD~i~v~g~-~~GG~~G~~~~~~ 160 (328)
T 2gjl_A 90 AAIIEAGIRVVETAGNDPGEHIAEFRR----H--GVKVIHKCTAVRHALKA--ERLGVDAVSIDGF-ECAGHPGEDDIPG 160 (328)
T ss_dssp HHHHHTTCCEEEEEESCCHHHHHHHHH----T--TCEEEEEESSHHHHHHH--HHTTCSEEEEECT-TCSBCCCSSCCCH
T ss_pred HHHHhcCCCEEEEcCCCcHHHHHHHHH----c--CCCEEeeCCCHHHHHHH--HHcCCCEEEEECC-CCCcCCCCccccH
Confidence 566788999999988665555555544 2 47888888776544322 2233799998 43 1121111 112
Q ss_pred HHHHHHHHHHHH-HHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 276 IFLAQKMMIYKC-NLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 276 v~~~qk~ii~~~-~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
+ ..+... ...+.|++.+.-+- + -.|+..++..|+|++++.
T Consensus 161 ~-----~~l~~v~~~~~iPviaaGGI~---------~---~~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 161 L-----VLLPAAANRLRVPIIASGGFA---------D---GRGLVAALALGADAINMG 201 (328)
T ss_dssp H-----HHHHHHHTTCCSCEEEESSCC---------S---HHHHHHHHHHTCSEEEES
T ss_pred H-----HHHHHHHHhcCCCEEEECCCC---------C---HHHHHHHHHcCCCEEEEC
Confidence 2 112222 23479999876532 1 246777888899999985
No 79
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=84.60 E-value=2.6 Score=40.66 Aligned_cols=142 Identities=14% Similarity=0.127 Sum_probs=90.8
Q ss_pred CCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchH--------HHHhhcCe
Q 010443 188 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFD--------DILRETDS 259 (510)
Q Consensus 188 p~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nld--------eI~~~~Dg 259 (510)
|..+..|.+.+.+-+.+.|++.|+++ +..+ .+++.+... ..+++.+-+=-|.|-...+ .|-.-+|.
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v-~a~~~l~~~-~~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAdE 104 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLT----PVYT-VKISGLAEK-LGVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATE 104 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----HHHH-HHHHHHHHH-HTCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEc----hHHh-eeehHhCCC-CCceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 66688888887788888999999976 4566 666666432 0467777773333322222 22222565
Q ss_pred eEE--eCCcccCCCCchhHHHHHHHHHHHHHHcCCCe--EEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEeccC
Q 010443 260 FMV--ARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPV--VTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGE 334 (510)
Q Consensus 260 I~I--grgDLg~e~~~~~v~~~qk~ii~~~~~~gkpv--ivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~E 334 (510)
|-+ ..|.+- +.+..-.+.+.++|..+|+|+ |+.|-.| |..|+..... +...|+|.|=-|
T Consensus 105 ID~vinig~~~-----~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~~e~i~~a~ria~eaGADfVKTs-- 168 (234)
T 1n7k_A 105 LDVVPHLSLGP-----EAVYREVSGIVKLAKSYGAVVKVILEAPLW---------DDKTLSLLVDSSRRAGADIVKTS-- 168 (234)
T ss_dssp EEECCCGGGCH-----HHHHHHHHHHHHHHHHTTCEEEEECCGGGS---------CHHHHHHHHHHHHHTTCSEEESC--
T ss_pred EEEeccchHHH-----HHHHHHHHHHHHHHhhcCCeEEEEEeccCC---------CHHHHHHHHHHHHHhCCCEEEeC--
Confidence 533 223221 155566678888999889997 6655433 5677766666 778899998654
Q ss_pred CCCCCCH-----HHHHHH--HHHHHH
Q 010443 335 SAAGAYP-----EIAVKI--MRRICI 353 (510)
Q Consensus 335 ta~G~yP-----~~~V~~--m~~i~~ 353 (510)
.|..| .+.|+. |++++.
T Consensus 169 --TG~~~~~gAt~~dv~l~~m~~~v~ 192 (234)
T 1n7k_A 169 --TGVYTKGGDPVTVFRLASLAKPLG 192 (234)
T ss_dssp --CSSSCCCCSHHHHHHHHHHHGGGT
T ss_pred --CCCCCCCCCCHHHHHHHHHHHHHC
Confidence 56665 788888 876553
No 80
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=84.47 E-value=6.1 Score=38.94 Aligned_cols=106 Identities=16% Similarity=0.197 Sum_probs=71.1
Q ss_pred HHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 218 GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 218 a~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.+..+.++++..+. .+.+++-+-.++.++-+.+. .|.+-||.+++- +..+++++.+.||||++.
T Consensus 88 ~~gl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~~---vd~~kIgs~~~~-----------n~~ll~~~a~~~kPV~lk 151 (276)
T 1vs1_A 88 LEGLKLLRRAGDEA--GLPVVTEVLDPRHVETVSRY---ADMLQIGARNMQ-----------NFPLLREVGRSGKPVLLK 151 (276)
T ss_dssp HHHHHHHHHHHHHH--TCCEEEECCCGGGHHHHHHH---CSEEEECGGGTT-----------CHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHc--CCcEEEecCCHHHHHHHHHh---CCeEEECccccc-----------CHHHHHHHHccCCeEEEc
Confidence 57788888887664 47888888888877666654 799999976653 233455556789999997
Q ss_pred hhhhHhhhcCCCCChHhHHHHHHHHH-cCCceEEec--cCCCCCCCHHHHHHH
Q 010443 298 TQMLESMIKSPRPTRAEATDVANAVL-DGTDCVMLS--GESAAGAYPEIAVKI 347 (510)
Q Consensus 298 TqmLeSM~~~~~PtraEv~Dv~~av~-~G~D~imLs--~Eta~G~yP~~~V~~ 347 (510)
|.|- .|-.|+....+++. .|.+-++|. +=+..-.||.+.+.+
T Consensus 152 ~G~~--------~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl 196 (276)
T 1vs1_A 152 RGFG--------NTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDV 196 (276)
T ss_dssp CCTT--------CCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBH
T ss_pred CCCC--------CCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCH
Confidence 6543 56788887777665 466444442 433333566555544
No 81
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=83.94 E-value=3.9 Score=38.02 Aligned_cols=131 Identities=14% Similarity=0.076 Sum_probs=69.5
Q ss_pred HHHHhccCcCCCCEEEEcCCC--CH-----HHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeEEeCCcc
Q 010443 196 EDILRWGVPNNIDMIALSFVR--KG-----SDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDL 267 (510)
Q Consensus 196 ~di~~~a~~~g~d~I~~sfV~--sa-----~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~IgrgDL 267 (510)
+.+ +.+.+.|+|+|.+.... ++ +-++.+++.+ .+..++..+-|.+-... ..+. +|.|+++....
T Consensus 79 ~~i-~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~----~~~~v~~~~~t~~e~~~---~~~~G~d~i~~~~~g~ 150 (223)
T 1y0e_A 79 KEV-DELIESQCEVIALDATLQQRPKETLDELVSYIRTHA----PNVEIMADIATVEEAKN---AARLGFDYIGTTLHGY 150 (223)
T ss_dssp HHH-HHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHC----TTSEEEEECSSHHHHHH---HHHTTCSEEECTTTTS
T ss_pred HHH-HHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhC----CCceEEecCCCHHHHHH---HHHcCCCEEEeCCCcC
Confidence 345 55678899998876543 22 3344555443 24566667666543322 2222 68888764322
Q ss_pred cC-CCCch-hHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHH
Q 010443 268 GM-EIPVE-KIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAV 345 (510)
Q Consensus 268 g~-e~~~~-~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V 345 (510)
+- ..+.. ..+. ...+-+.+...+.|++.... .-|. .|+..+...|+|++++. +++-+ |.++.
T Consensus 151 t~~~~~~~~~~~~-~~~~~~~~~~~~ipvia~GG---------I~~~---~~~~~~~~~Gad~v~vG--~al~~-p~~~~ 214 (223)
T 1y0e_A 151 TSYTQGQLLYQND-FQFLKDVLQSVDAKVIAEGN---------VITP---DMYKRVMDLGVHCSVVG--GAITR-PKEIT 214 (223)
T ss_dssp STTSTTCCTTHHH-HHHHHHHHHHCCSEEEEESS---------CCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHH
T ss_pred cCCCCCCCCCccc-HHHHHHHHhhCCCCEEEecC---------CCCH---HHHHHHHHcCCCEEEEC--hHHcC-cHHHH
Confidence 11 11110 1111 12222233445899887543 2233 45566677899999997 33433 66666
Q ss_pred HHHHH
Q 010443 346 KIMRR 350 (510)
Q Consensus 346 ~~m~~ 350 (510)
+.+.+
T Consensus 215 ~~~~~ 219 (223)
T 1y0e_A 215 KRFVQ 219 (223)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 82
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=83.16 E-value=9 Score=36.40 Aligned_cols=109 Identities=9% Similarity=0.037 Sum_probs=65.4
Q ss_pred ChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeEEeCCcccC
Q 010443 191 TEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGM 269 (510)
Q Consensus 191 t~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~IgrgDLg~ 269 (510)
+..+...+.+.+++.|++.|=+.+ ++....+.++++.++. .+..+-+-. .---+.++.-+++ +|++..+--|
T Consensus 36 ~~~~~~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~igagt--vl~~d~~~~A~~aGAd~v~~p~~d--- 108 (225)
T 1mxs_A 36 REEDILPLADALAAGGIRTLEVTL-RSQHGLKAIQVLREQR-PELCVGAGT--VLDRSMFAAVEAAGAQFVVTPGIT--- 108 (225)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEES-SSTHHHHHHHHHHHHC-TTSEEEEEC--CCSHHHHHHHHHHTCSSEECSSCC---
T ss_pred CHHHHHHHHHHHHHCCCCEEEEec-CCccHHHHHHHHHHhC-cccEEeeCe--EeeHHHHHHHHHCCCCEEEeCCCC---
Confidence 344444444778899999999986 4455544454443332 244444432 2111334433333 7898855322
Q ss_pred CCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEe
Q 010443 270 EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 331 (510)
Q Consensus 270 e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imL 331 (510)
..+++.|+.+|.|.+.- .-|. +++..|...|+|.+.+
T Consensus 109 -----------~~v~~~~~~~g~~~i~G-----------~~t~---~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 109 -----------EDILEAGVDSEIPLLPG-----------ISTP---SEIMMGYALGYRRFKL 145 (225)
T ss_dssp -----------HHHHHHHHHCSSCEECE-----------ECSH---HHHHHHHTTTCCEEEE
T ss_pred -----------HHHHHHHHHhCCCEEEe-----------eCCH---HHHHHHHHCCCCEEEE
Confidence 36888999999998742 1122 3457788999999998
No 83
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=83.02 E-value=4.7 Score=41.56 Aligned_cols=120 Identities=18% Similarity=0.315 Sum_probs=66.7
Q ss_pred cHHHHHhccCcCCCCEEEE--cCCCCHHHHHHHHHHhccCCCCceEEE-EecCHHHHhchHHHHhh-cCeeEEeCCcccC
Q 010443 194 DKEDILRWGVPNNIDMIAL--SFVRKGSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRE-TDSFMVARGDLGM 269 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~--sfV~sa~dv~~vr~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~-~DgI~IgrgDLg~ 269 (510)
+.+.+ +.+++.|+|+|.+ ++- +++.+.++-+.+++.-.++.|++ .+-+.+-.+.+ .+. +|+|.++-+- |.
T Consensus 154 ~~~~a-~~~~~~G~d~i~i~~~~g-~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a---~~~Gad~I~vg~~~-G~ 227 (404)
T 1eep_A 154 TIERV-EELVKAHVDILVIDSAHG-HSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDL---ISVGADCLKVGIGP-GS 227 (404)
T ss_dssp HHHHH-HHHHHTTCSEEEECCSCC-SSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHH---HTTTCSEEEECSSC-ST
T ss_pred HHHHH-HHHHHCCCCEEEEeCCCC-ChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHH---HhcCCCEEEECCCC-Cc
Confidence 44455 5667889999987 442 32323322222322212466775 56665444333 333 7999995211 11
Q ss_pred --------CCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 270 --------EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 270 --------e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
..+.+. ......+.+.+...+.|+|.+.-+- ...|+..++..|+|++++.
T Consensus 228 ~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipVia~GGI~------------~~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 228 ICTTRIVAGVGVPQ-ITAICDVYEACNNTNICIIADGGIR------------FSGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp TSHHHHHHCCCCCH-HHHHHHHHHHHTTSSCEEEEESCCC------------SHHHHHHHHHHTCSEEEEC
T ss_pred CcCccccCCCCcch-HHHHHHHHHHHhhcCceEEEECCCC------------CHHHHHHHHHcCCCHHhhC
Confidence 012222 2233444445555689998754432 2467888999999999993
No 84
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=82.93 E-value=5.2 Score=37.56 Aligned_cols=134 Identities=8% Similarity=0.051 Sum_probs=73.9
Q ss_pred hccCcCCCCEEEEcCC--CCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEe---CCcccCCCCch
Q 010443 200 RWGVPNNIDMIALSFV--RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVA---RGDLGMEIPVE 274 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV--~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~Ig---rgDLg~e~~~~ 274 (510)
+.+.+.|+|+|.+..- .+ ++..++.+.+.+.| ..++.-+-+..-.+.+.++...+|.+++. +|--|......
T Consensus 85 ~~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~~~g--~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~~~~~~ 161 (230)
T 1rpx_A 85 PDFIKAGADIVSVHCEQSST-IHLHRTINQIKSLG--AKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQSFIES 161 (230)
T ss_dssp HHHHHTTCSEEEEECSTTTC-SCHHHHHHHHHHTT--SEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSCCCCTT
T ss_pred HHHHHcCCCEEEEEecCccc-hhHHHHHHHHHHcC--CcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCccccHH
Confidence 4457789999988766 44 44445555555443 34444452222344556666678977443 44334444432
Q ss_pred hHHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHH
Q 010443 275 KIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRR 350 (510)
Q Consensus 275 ~v~~~qk~ii~~~~~~--gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~ 350 (510)
.+.. -+++-+.+.+. ..|+++.--+ .|. .+..++..|+|++..++--.....|.++++.+.+
T Consensus 162 ~~~~-i~~l~~~~~~~~~~~pi~v~GGI--------~~~-----n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~l~~ 225 (230)
T 1rpx_A 162 QVKK-ISDLRKICAERGLNPWIEVDGGV--------GPK-----NAYKVIEAGANALVAGSAVFGAPDYAEAIKGIKT 225 (230)
T ss_dssp HHHH-HHHHHHHHHHHTCCCEEEEESSC--------CTT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHT
T ss_pred HHHH-HHHHHHHHHhcCCCceEEEECCC--------CHH-----HHHHHHHcCCCEEEEChhhhCCCCHHHHHHHHHH
Confidence 2222 22333333222 5676654321 232 3355566699999997655445578888877654
No 85
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=82.83 E-value=5.6 Score=37.98 Aligned_cols=133 Identities=14% Similarity=0.072 Sum_probs=75.8
Q ss_pred HHHHhccCcCCCCEEEEcCC--CCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeEEeCCcccCC--
Q 010443 196 EDILRWGVPNNIDMIALSFV--RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGME-- 270 (510)
Q Consensus 196 ~di~~~a~~~g~d~I~~sfV--~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~IgrgDLg~e-- 270 (510)
+++ ..+.+.|+|+|.+--. .+++.+.++.+.+++. +..+++.+-|.+-.+.+ .+. +|.|.+.-..+...
T Consensus 92 ~~i-~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~eea~~a---~~~Gad~Ig~~~~g~t~~~~ 165 (232)
T 3igs_A 92 DDV-DALAQAGAAIIAVDGTARQRPVAVEALLARIHHH--HLLTMADCSSVDDGLAC---QRLGADIIGTTMSGYTTPDT 165 (232)
T ss_dssp HHH-HHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECCSHHHHHHH---HHTTCSEEECTTTTSSSSSC
T ss_pred HHH-HHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC--CCEEEEeCCCHHHHHHH---HhCCCCEEEEcCccCCCCCC
Confidence 345 4457889999876433 4566777776666654 56777777665443322 222 68775431112110
Q ss_pred CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHH
Q 010443 271 IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRR 350 (510)
Q Consensus 271 ~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~ 350 (510)
.....+..+ +++ ++.+.|++.... .-|. .|+..+...|+|++++. |++.+ |.+..+.+.+
T Consensus 166 ~~~~~~~~i-~~l----~~~~ipvIA~GG---------I~t~---~d~~~~~~~GadgV~VG--sal~~-p~~~~~~~~~ 225 (232)
T 3igs_A 166 PEEPDLPLV-KAL----HDAGCRVIAEGR---------YNSP---ALAAEAIRYGAWAVTVG--SAITR-LEHICGWYND 225 (232)
T ss_dssp CSSCCHHHH-HHH----HHTTCCEEEESC---------CCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHHH
T ss_pred CCCCCHHHH-HHH----HhcCCcEEEECC---------CCCH---HHHHHHHHcCCCEEEEe--hHhcC-HHHHHHHHHH
Confidence 111222211 222 223899987433 3333 46667777899999996 55555 8777777766
Q ss_pred HHHH
Q 010443 351 ICIE 354 (510)
Q Consensus 351 i~~~ 354 (510)
.+++
T Consensus 226 ~i~~ 229 (232)
T 3igs_A 226 ALKK 229 (232)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 86
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=82.48 E-value=2.9 Score=39.88 Aligned_cols=145 Identities=15% Similarity=0.075 Sum_probs=91.6
Q ss_pred CCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHh--------hcCe
Q 010443 188 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR--------ETDS 259 (510)
Q Consensus 188 p~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~--------~~Dg 259 (510)
|..+..|.+.+.+-+.+.|++.|+++ +..+..+++.+. +.++.+.+-+=.|.|-...+..+. -+|.
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v~~~~~~l~--~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAde 87 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIP----PSYVAWVRARYP--HAPFRLVTVVGFPLGYQEKEVKALEAALACARGADE 87 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECC----GGGHHHHHHHCT--TCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--CCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCE
Confidence 56688888888788888999999875 456777777774 345788888866665433332222 2455
Q ss_pred eEEe--CCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEeccCCC
Q 010443 260 FMVA--RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGESA 336 (510)
Q Consensus 260 I~Ig--rgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~Eta 336 (510)
|-+- .|.| .+=..+.+..-.+.+.++|...+.|+|+.|-. +|..|+..... +...|+|.|=-|
T Consensus 88 vd~vinig~~-~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~---------l~~e~i~~a~~ia~eaGADfVKTs---- 153 (220)
T 1ub3_A 88 VDMVLHLGRA-KAGDLDYLEAEVRAVREAVPQAVLKVILETGY---------FSPEEIARLAEAAIRGGADFLKTS---- 153 (220)
T ss_dssp EEEECCHHHH-HTTCHHHHHHHHHHHHHHSTTSEEEEECCGGG---------SCHHHHHHHHHHHHHHTCSEEECC----
T ss_pred EEecccchhh-hCCCHHHHHHHHHHHHHHHcCCCceEEEecCC---------CCHHHHHHHHHHHHHhCCCEEEeC----
Confidence 4321 2211 00012345555566667776666777876654 36777766666 778899998655
Q ss_pred CCCC----HHHHHHHHHHHH
Q 010443 337 AGAY----PEIAVKIMRRIC 352 (510)
Q Consensus 337 ~G~y----P~~~V~~m~~i~ 352 (510)
.|.. -.+.++.|++++
T Consensus 154 TGf~~~gat~~dv~~m~~~v 173 (220)
T 1ub3_A 154 TGFGPRGASLEDVALLVRVA 173 (220)
T ss_dssp CSSSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHhh
Confidence 4443 458888888764
No 87
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=82.43 E-value=3.6 Score=41.45 Aligned_cols=117 Identities=16% Similarity=0.228 Sum_probs=66.3
Q ss_pred hhcHHHHHhccCcCC--CCEEEEcCCC-----CHHHHHHHHHHhccCCCCceEEEE-ecCHHHHhchHHHHhh-cCeeEE
Q 010443 192 EKDKEDILRWGVPNN--IDMIALSFVR-----KGSDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRE-TDSFMV 262 (510)
Q Consensus 192 ~~D~~di~~~a~~~g--~d~I~~sfV~-----sa~dv~~vr~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-~DgI~I 262 (510)
+.+.+.+ +...+.| ++++.+.... ..+.++.+++.. ..+.++.. +-|++ ......+. +|+|.+
T Consensus 105 ~~~~~~a-~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~----~~~~vi~G~v~s~e---~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 105 EDEYEFV-QQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHL----PESFVIAGNVGTPE---AVRELENAGADATKV 176 (336)
T ss_dssp HHHHHHH-HHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHC----TTSEEEEEEECSHH---HHHHHHHHTCSEEEE
T ss_pred HHHHHHH-HHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhC----CCCEEEECCcCCHH---HHHHHHHcCCCEEEE
Confidence 4555555 5667778 9988764321 223455555443 23566655 65544 33333443 799999
Q ss_pred eC--Cc-------ccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 263 AR--GD-------LGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 263 gr--gD-------Lg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
+- |= .+...| .+ ....+.+.+++.+.|+|.+.-+- --.|+..|+..|||++|+.
T Consensus 177 s~hgG~~~~~~~~~~~g~~--g~--~~~~l~~v~~~~~ipVIa~GGI~------------~g~Dv~kalalGAdaV~iG 239 (336)
T 1ypf_A 177 GIGPGKVCITKIKTGFGTG--GW--QLAALRWCAKAASKPIIADGGIR------------TNGDVAKSIRFGATMVMIG 239 (336)
T ss_dssp CSSCSTTCHHHHHHSCSST--TC--HHHHHHHHHHTCSSCEEEESCCC------------STHHHHHHHHTTCSEEEES
T ss_pred ecCCCceeecccccCcCCc--hh--HHHHHHHHHHHcCCcEEEeCCCC------------CHHHHHHHHHcCCCEEEeC
Confidence 41 10 111111 00 12233334445589999865533 3468899999999999995
No 88
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=82.21 E-value=6.3 Score=36.85 Aligned_cols=105 Identities=12% Similarity=0.123 Sum_probs=64.0
Q ss_pred hcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeEEeCCcccCCC
Q 010443 193 KDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGMEI 271 (510)
Q Consensus 193 ~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~IgrgDLg~e~ 271 (510)
.+...+.+.+++.|++.|-+.+ ++....+.++... + .+..+-+-. .---+.++.-+++ +|++..+-.|
T Consensus 25 ~~~~~~~~~l~~gGv~~iel~~-k~~~~~~~i~~~~-~--~~~~~gag~--vl~~d~~~~A~~~GAd~v~~~~~d----- 93 (207)
T 2yw3_A 25 EDLLGLARVLEEEGVGALEITL-RTEKGLEALKALR-K--SGLLLGAGT--VRSPKEAEAALEAGAAFLVSPGLL----- 93 (207)
T ss_dssp CCHHHHHHHHHHTTCCEEEEEC-SSTHHHHHHHHHT-T--SSCEEEEES--CCSHHHHHHHHHHTCSEEEESSCC-----
T ss_pred HHHHHHHHHHHHcCCCEEEEeC-CChHHHHHHHHHh-C--CCCEEEeCe--EeeHHHHHHHHHcCCCEEEcCCCC-----
Confidence 3444443777889999999986 4555555554433 3 344443332 1112444444443 7888765322
Q ss_pred CchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEe
Q 010443 272 PVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 331 (510)
Q Consensus 272 ~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imL 331 (510)
..++++|+.+|.|.+.-+ -| .+++..|...|+|.+.+
T Consensus 94 ---------~~v~~~~~~~g~~~i~G~-----------~t---~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 94 ---------EEVAALAQARGVPYLPGV-----------LT---PTEVERALALGLSALKF 130 (207)
T ss_dssp ---------HHHHHHHHHHTCCEEEEE-----------CS---HHHHHHHHHTTCCEEEE
T ss_pred ---------HHHHHHHHHhCCCEEecC-----------CC---HHHHHHHHHCCCCEEEE
Confidence 267788999999987521 23 33457788899999988
No 89
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=81.71 E-value=5.7 Score=41.03 Aligned_cols=109 Identities=12% Similarity=0.121 Sum_probs=79.6
Q ss_pred hccCcCCCCEEEEcCC-----------CCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCccc
Q 010443 200 RWGVPNNIDMIALSFV-----------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLG 268 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV-----------~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg 268 (510)
+.+.+.|+|+|...-- -..+..+.++++..+. ++.+++-+-.++.++-+. +..|.+-||.+++.
T Consensus 163 ~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~te~~d~~~~~~l~---~~vd~lkIgs~~~~ 237 (385)
T 3nvt_A 163 ESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVISEIVTPADIEVAL---DYVDVIQIGARNMQ 237 (385)
T ss_dssp HHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCSGGGHHHHT---TTCSEEEECGGGTT
T ss_pred HHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEEecCCHHHHHHHH---hhCCEEEECccccc
Confidence 5667789998865421 1257788888877654 588898888877776554 45899999987764
Q ss_pred CCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHc-CCceEEec
Q 010443 269 MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD-GTDCVMLS 332 (510)
Q Consensus 269 ~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~-G~D~imLs 332 (510)
- ..+++++.+.||||++.|.|. .|-.|+...+..+.. |.+=++|.
T Consensus 238 n-----------~~LL~~~a~~gkPVilk~G~~--------~t~~e~~~Ave~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 238 N-----------FELLKAAGRVDKPILLKRGLS--------ATIEEFIGAAEYIMSQGNGKIILC 283 (385)
T ss_dssp C-----------HHHHHHHHTSSSCEEEECCTT--------CCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred C-----------HHHHHHHHccCCcEEEecCCC--------CCHHHHHHHHHHHHHcCCCeEEEE
Confidence 3 256677788999999977653 677889888887764 77666665
No 90
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=81.70 E-value=6.6 Score=36.99 Aligned_cols=109 Identities=6% Similarity=0.052 Sum_probs=66.5
Q ss_pred ChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeEEeCCcccC
Q 010443 191 TEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGM 269 (510)
Q Consensus 191 t~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~IgrgDLg~ 269 (510)
+..+...+.+.+++.|++.|=+.+ ++....+.++++.++. .+..+-+- |.---+.++.-+++ +|++..+--|
T Consensus 26 ~~~~~~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~vgag--tvi~~d~~~~A~~aGAd~v~~p~~d--- 98 (214)
T 1wbh_A 26 KLEHAVPMAKALVAGGVRVLNVTL-RTECAVDAIRAIAKEV-PEAIVGAG--TVLNPQQLAEVTEAGAQFAISPGLT--- 98 (214)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEES-CSTTHHHHHHHHHHHC-TTSEEEEE--SCCSHHHHHHHHHHTCSCEEESSCC---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeC-CChhHHHHHHHHHHHC-cCCEEeeC--EEEEHHHHHHHHHcCCCEEEcCCCC---
Confidence 444444444788899999999996 4455455554443333 23444332 11111444444444 7999866322
Q ss_pred CCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEe
Q 010443 270 EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 331 (510)
Q Consensus 270 e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imL 331 (510)
..+++.|+.+|.|.+.-+ -| .+++..|...|+|.+.+
T Consensus 99 -----------~~v~~~~~~~g~~~i~G~-----------~t---~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 99 -----------EPLLKAATEGTIPLIPGI-----------ST---VSELMLGMDYGLKEFKF 135 (214)
T ss_dssp -----------HHHHHHHHHSSSCEEEEE-----------SS---HHHHHHHHHTTCCEEEE
T ss_pred -----------HHHHHHHHHhCCCEEEec-----------CC---HHHHHHHHHCCCCEEEE
Confidence 368889999999987521 12 33457788999999998
No 91
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=81.05 E-value=38 Score=35.31 Aligned_cols=155 Identities=12% Similarity=0.086 Sum_probs=97.6
Q ss_pred CCChhcHHHHHhccCcCCCCEEEEc-CCCCHHHHHHHHHHhccCCCCceEEEEe-cCHHHHhchHHHHhh-cC--eeEEe
Q 010443 189 TLTEKDKEDILRWGVPNNIDMIALS-FVRKGSDLVNVRKVLGPHAKNIQLMSKV-ENQEGVVNFDDILRE-TD--SFMVA 263 (510)
Q Consensus 189 ~lt~~D~~di~~~a~~~g~d~I~~s-fV~sa~dv~~vr~~l~~~~~~~~IiakI-Et~~av~nldeI~~~-~D--gI~Ig 263 (510)
.++..++..|.+...+.|+|.|=+. ..-++.+...++.+.. .+....+.+.+ .+.++++. .++. .| .++++
T Consensus 57 ~~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~~-~~~~~~v~~~~r~~~~di~~---A~~aG~~~V~i~~s 132 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAICK-LGLKCKILTHIRCHMDDARV---AVETGVDGVDVVIG 132 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHT-SCCSSEEEEEEESCHHHHHH---HHHTTCSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHHh-cCCCCEEEEeeccChhhHHH---HHHcCCCEEEEEee
Confidence 4677888888677778999999884 4566777777766553 34455665532 33444332 2222 45 45555
Q ss_pred CCcccC----CCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEeccCCCCC
Q 010443 264 RGDLGM----EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGESAAG 338 (510)
Q Consensus 264 rgDLg~----e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~Eta~G 338 (510)
-.|+-. ....+++...-.++++.|+++|..|.+... ...+-+...+.+++. +...|+|.|.|. +|.=.
T Consensus 133 ~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e------da~r~d~~~~~~v~~~~~~~Ga~~i~l~-DTvG~ 205 (423)
T 3ivs_A 133 TSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE------DSFRSDLVDLLSLYKAVDKIGVNRVGIA-DTVGC 205 (423)
T ss_dssp C-------------CHHHHHHHHHHHHHHTTTCEEEEEEE------SGGGSCHHHHHHHHHHHHHHCCSEEEEE-ETTSC
T ss_pred ccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc------cCcCCCHHHHHHHHHHHHHhCCCccccC-CccCc
Confidence 555432 223456666777899999999999876422 222344555666666 456799999987 88778
Q ss_pred CCHHHHHHHHHHHHHH
Q 010443 339 AYPEIAVKIMRRICIE 354 (510)
Q Consensus 339 ~yP~~~V~~m~~i~~~ 354 (510)
..|.++-++++.+...
T Consensus 206 ~~P~~v~~lv~~l~~~ 221 (423)
T 3ivs_A 206 ATPRQVYDLIRTLRGV 221 (423)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhh
Confidence 8899988888776653
No 92
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=80.89 E-value=8.5 Score=35.25 Aligned_cols=124 Identities=14% Similarity=0.125 Sum_probs=67.9
Q ss_pred cCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCC-cc-----cCCCCchh
Q 010443 202 GVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARG-DL-----GMEIPVEK 275 (510)
Q Consensus 202 a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~Igrg-DL-----g~e~~~~~ 275 (510)
+.+.|+|+|.++.-.- ++..++++. ....+..-+.|++.+... ...-+|.++++.. += +...+++.
T Consensus 82 a~~~gad~v~l~~~~~--~~~~~~~~~----~~~~~~v~~~t~~e~~~~--~~~g~d~i~~~~~~~~~~~~~~~~~~~~~ 153 (215)
T 1xi3_A 82 ALAVDADGVQLGPEDM--PIEVAKEIA----PNLIIGASVYSLEEALEA--EKKGADYLGAGSVFPTKTKEDARVIGLEG 153 (215)
T ss_dssp HHHHTCSEEEECTTSC--CHHHHHHHC----TTSEEEEEESSHHHHHHH--HHHTCSEEEEECSSCC----CCCCCHHHH
T ss_pred HHHcCCCEEEECCccC--CHHHHHHhC----CCCEEEEecCCHHHHHHH--HhcCCCEEEEcCCccCCCCCCCCCcCHHH
Confidence 4567999999874321 234455443 234444456666544322 1223799998641 10 11222222
Q ss_pred HHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHH
Q 010443 276 IFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 353 (510)
Q Consensus 276 v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 353 (510)
+.. + ++...+|++.+.-+ .| .++..+...|+|++.++.--...+.|.+.++.+.+.++
T Consensus 154 l~~----l---~~~~~~pvia~GGI--------~~-----~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 211 (215)
T 1xi3_A 154 LRK----I---VESVKIPVVAIGGI--------NK-----DNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVE 211 (215)
T ss_dssp HHH----H---HHHCSSCEEEESSC--------CT-----TTHHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHH----H---HHhCCCCEEEECCc--------CH-----HHHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHh
Confidence 222 2 23347898876432 12 24556667899999997644444567777777666554
No 93
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=80.86 E-value=8.6 Score=36.52 Aligned_cols=109 Identities=10% Similarity=0.095 Sum_probs=67.1
Q ss_pred ChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeEEeCCcccC
Q 010443 191 TEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGM 269 (510)
Q Consensus 191 t~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~IgrgDLg~ 269 (510)
+..+...+.+.+++.|++.|=+.+ ++....+.++++.++. .+..+-+- |.---+.++.-+++ +|+++.+-.|
T Consensus 27 ~~~~~~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~l~vgaG--tvl~~d~~~~A~~aGAd~v~~p~~d--- 99 (224)
T 1vhc_A 27 NADDILPLADTLAKNGLSVAEITF-RSEAAADAIRLLRANR-PDFLIAAG--TVLTAEQVVLAKSSGADFVVTPGLN--- 99 (224)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTCEEEEE--SCCSHHHHHHHHHHTCSEEECSSCC---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec-cCchHHHHHHHHHHhC-cCcEEeeC--cEeeHHHHHHHHHCCCCEEEECCCC---
Confidence 444444444788899999999996 4555555555444433 23444333 22112444444444 7999765333
Q ss_pred CCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEe
Q 010443 270 EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 331 (510)
Q Consensus 270 e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imL 331 (510)
..+++.|+++|+|++.- ..|. +++..|...|+|.+.+
T Consensus 100 -----------~~v~~~ar~~g~~~i~G-----------v~t~---~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 100 -----------PKIVKLCQDLNFPITPG-----------VNNP---MAIEIALEMGISAVKF 136 (224)
T ss_dssp -----------HHHHHHHHHTTCCEECE-----------ECSH---HHHHHHHHTTCCEEEE
T ss_pred -----------HHHHHHHHHhCCCEEec-----------cCCH---HHHHHHHHCCCCEEEE
Confidence 45678999999998752 1232 3447788999999998
No 94
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=80.84 E-value=9.5 Score=38.02 Aligned_cols=119 Identities=11% Similarity=0.124 Sum_probs=63.0
Q ss_pred hccCcCCCCEEEEcCCC----------CH----HHHHHHHHHhcc----CCCCceEEEEecCHHHHhchHHHHhh-----
Q 010443 200 RWGVPNNIDMIALSFVR----------KG----SDLVNVRKVLGP----HAKNIQLMSKVENQEGVVNFDDILRE----- 256 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~----------sa----~dv~~vr~~l~~----~~~~~~IiakIEt~~av~nldeI~~~----- 256 (510)
+.+.+ |+|+|-+.|-. +. +.++.+|+...+ .|.+..|+.||=.-...+++.++++.
T Consensus 160 ~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~G 238 (336)
T 1f76_A 160 EKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHN 238 (336)
T ss_dssp HHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTT
T ss_pred HHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcC
Confidence 44334 89998886621 11 344445554421 13468899997321111233333332
Q ss_pred cCeeEEeCCcccC----------CC----CchhHHHHHHHHHHHHH-Hc--CCCeEEehhhhHhhhcCCCCChHhHHHHH
Q 010443 257 TDSFMVARGDLGM----------EI----PVEKIFLAQKMMIYKCN-LV--GKPVVTATQMLESMIKSPRPTRAEATDVA 319 (510)
Q Consensus 257 ~DgI~IgrgDLg~----------e~----~~~~v~~~qk~ii~~~~-~~--gkpvivaTqmLeSM~~~~~PtraEv~Dv~ 319 (510)
+|+|.+.-+-.+. +. |....+... ..+...+ .. +.|+|.+..+- ...|+.
T Consensus 239 vd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~-~~i~~i~~~~~~~ipVi~~GGI~------------~~~da~ 305 (336)
T 1f76_A 239 IDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKST-EIIRRLSLELNGRLPIIGVGGID------------SVIAAR 305 (336)
T ss_dssp CSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHH-HHHHHHHHHHTTSSCEEEESSCC------------SHHHHH
T ss_pred CcEEEEeCCcccccccccccccccCCCcCCchhHHHHH-HHHHHHHHHhCCCCCEEEECCCC------------CHHHHH
Confidence 5999885321111 11 111122222 3333333 34 78998765433 245778
Q ss_pred HHHHcCCceEEec
Q 010443 320 NAVLDGTDCVMLS 332 (510)
Q Consensus 320 ~av~~G~D~imLs 332 (510)
.++..|||+|++.
T Consensus 306 ~~l~~GAd~V~ig 318 (336)
T 1f76_A 306 EKIAAGASLVQIY 318 (336)
T ss_dssp HHHHHTCSEEEES
T ss_pred HHHHCCCCEEEee
Confidence 8888999999997
No 95
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=80.39 E-value=13 Score=39.28 Aligned_cols=119 Identities=16% Similarity=0.206 Sum_probs=70.1
Q ss_pred cHHHHHhccCcCCCCEEEEcCCC-----CHHHHHHHHHHhccCCCCceEEE-EecCHHHHhchHHHHhhcCeeEEeCCcc
Q 010443 194 DKEDILRWGVPNNIDMIALSFVR-----KGSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRETDSFMVARGDL 267 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~sfV~-----sa~dv~~vr~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~~DgI~IgrgDL 267 (510)
..+.+ .++++.|+|.|.+.+.. ..+.++.+++.. .+..+++ -+-|.+....+.+ .-+|+|.++-+-=
T Consensus 238 ~~~~a-~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~----p~~pvi~g~~~t~e~a~~l~~--~G~d~I~v~~~~G 310 (494)
T 1vrd_A 238 TMERV-EKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADY----PDLPVVAGNVATPEGTEALIK--AGADAVKVGVGPG 310 (494)
T ss_dssp HHHHH-HHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHC----TTSCEEEEEECSHHHHHHHHH--TTCSEEEECSSCS
T ss_pred HHHHH-HHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHC----CCceEEeCCcCCHHHHHHHHH--cCCCEEEEcCCCC
Confidence 34556 67789999999986543 234444444443 1355554 3555554433322 1279999964310
Q ss_pred cCC-------CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 268 GME-------IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 268 g~e-------~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
+.. .+.+. ......+.+.++..+.|+|.+..+- .-.|+..++..|||++++.
T Consensus 311 ~~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipvia~GGI~------------~~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 311 SICTTRVVAGVGVPQ-LTAVMECSEVARKYDVPIIADGGIR------------YSGDIVKALAAGAESVMVG 369 (494)
T ss_dssp TTCHHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred ccccccccCCCCccH-HHHHHHHHHHHhhcCCCEEEECCcC------------CHHHHHHHHHcCCCEEEEC
Confidence 100 11222 2333455566666799999865533 2468899999999999974
No 96
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=79.98 E-value=5.2 Score=39.72 Aligned_cols=145 Identities=14% Similarity=0.115 Sum_probs=86.9
Q ss_pred CCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHH--------hhcCe
Q 010443 188 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDIL--------RETDS 259 (510)
Q Consensus 188 p~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~--------~~~Dg 259 (510)
|..|+.|.+.+.+-+.+.|+..|+++ +..+..+++.|.. .+++|.+=|=-|.|-...+.-+ .-+|.
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~----P~~V~~a~~~L~~--s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 142 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR----PDYVSRAVQYLQG--TQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASE 142 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHTTT--SSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHcCC--CCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 55688888777678888999999986 6688899888853 4577777775555433222211 11444
Q ss_pred eEEeCCcccCCCCc------hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEec
Q 010443 260 FMVARGDLGMEIPV------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLS 332 (510)
Q Consensus 260 I~IgrgDLg~e~~~------~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs 332 (510)
|=+ -+.++. +.+..-.+.+.++|......||+-|-. .|..|+..... +...|+|.|=-|
T Consensus 143 IDm-----VINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~---------Lt~eei~~A~~ia~eaGADfVKTS 208 (288)
T 3oa3_A 143 LDM-----VMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQ---------LTADEIIAGCVLSSLAGADYVKTS 208 (288)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG---------CCHHHHHHHHHHHHHTTCSEEECC
T ss_pred EEE-----EeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCC---------CCHHHHHHHHHHHHHcCCCEEEcC
Confidence 321 112222 233333344444443322344554443 36777766555 778899998776
Q ss_pred cCCCC--CCCHHHHHHHHHHHHHH
Q 010443 333 GESAA--GAYPEIAVKIMRRICIE 354 (510)
Q Consensus 333 ~Eta~--G~yP~~~V~~m~~i~~~ 354 (510)
|-. |.--.+.|+.|+++++.
T Consensus 209 --TGf~~~GAT~edv~lmr~~v~~ 230 (288)
T 3oa3_A 209 --TGFNGPGASIENVSLMSAVCDS 230 (288)
T ss_dssp --CSSSSCCCCHHHHHHHHHHHHH
T ss_pred --CCCCCCCCCHHHHHHHHHHHHH
Confidence 322 23456789999998753
No 97
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=79.94 E-value=3.7 Score=39.27 Aligned_cols=129 Identities=10% Similarity=0.084 Sum_probs=76.8
Q ss_pred CCEEEEcCCCCHHHHHHHHH---HhccCCCCceEEEEecCHHHHhchHHHHh--hcCeeEEeCCcc---cCCCCchhHHH
Q 010443 207 IDMIALSFVRKGSDLVNVRK---VLGPHAKNIQLMSKVENQEGVVNFDDILR--ETDSFMVARGDL---GMEIPVEKIFL 278 (510)
Q Consensus 207 ~d~I~~sfV~sa~dv~~vr~---~l~~~~~~~~IiakIEt~~av~nldeI~~--~~DgI~IgrgDL---g~e~~~~~v~~ 278 (510)
+|++.+-.-.+.+++.++.+ .+++.|..+.+-..-.|+ ++.+++++. ..|.|++..-+- |.......+..
T Consensus 86 Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp--~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~k 163 (227)
T 1tqx_A 86 SNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTD--VQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGK 163 (227)
T ss_dssp SSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSC--GGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHH
T ss_pred CCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCc--HHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHH
Confidence 99888765544436777767 777777665555444554 778999999 799998764333 33333222222
Q ss_pred HHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHH
Q 010443 279 AQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 353 (510)
Q Consensus 279 ~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 353 (510)
++ ++-+... +.++.+..-+ +. ..+..++..|+|.+...+--.....|.++++.+++.+.
T Consensus 164 i~-~lr~~~~--~~~I~VdGGI----------~~---~ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 164 VS-FLRKKYK--NLNIQVDGGL----------NI---ETTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQ 222 (227)
T ss_dssp HH-HHHHHCT--TCEEEEESSC----------CH---HHHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHHHHH
T ss_pred HH-HHHHhcc--CCeEEEECCC----------CH---HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHH
Confidence 22 1111111 5555544321 11 24456677899999986443333469999999877543
No 98
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=79.00 E-value=22 Score=35.77 Aligned_cols=151 Identities=15% Similarity=0.101 Sum_probs=92.6
Q ss_pred CCChhcHHHHHhccCcCCCCEEEE-----cCCCC-------HHHHHHHHHHhccCCCCceEEEEe-cCHHHHhchHHHHh
Q 010443 189 TLTEKDKEDILRWGVPNNIDMIAL-----SFVRK-------GSDLVNVRKVLGPHAKNIQLMSKV-ENQEGVVNFDDILR 255 (510)
Q Consensus 189 ~lt~~D~~di~~~a~~~g~d~I~~-----sfV~s-------a~dv~~vr~~l~~~~~~~~IiakI-Et~~av~nldeI~~ 255 (510)
.++..++..|.+...+.|+|.|=+ ++..| +.+.+.++++.. ...++++.+.. =+..-.+.++..++
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~-~~~~~~i~~l~~p~~~~~~~i~~a~~ 104 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAG-EISHAQIATLLLPGIGSVHDLKNAYQ 104 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHT-TCSSSEEEEEECBTTBCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHh-hCCCCEEEEEecCCcccHHHHHHHHh
Confidence 467778777756767799999998 33322 345555555443 33567777763 21111233343333
Q ss_pred h-cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEecc
Q 010443 256 E-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 333 (510)
Q Consensus 256 ~-~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~ 333 (510)
. .|++.|. + +..++ ...+..++.|+++|+.+...- ...+.-+...+.+++. +...|+|.|.|.+
T Consensus 105 aGvd~v~I~---~----~~s~~-~~~~~~i~~ak~~G~~v~~~~------~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~D 170 (345)
T 1nvm_A 105 AGARVVRVA---T----HCTEA-DVSKQHIEYARNLGMDTVGFL------MMSHMIPAEKLAEQGKLMESYGATCIYMAD 170 (345)
T ss_dssp HTCCEEEEE---E----ETTCG-GGGHHHHHHHHHHTCEEEEEE------ESTTSSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCcCEEEEE---E----eccHH-HHHHHHHHHHHHCCCEEEEEE------EeCCCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 3 6888774 1 22111 234677889999999987641 1234445566777777 5556899999974
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH
Q 010443 334 ESAAGAYPEIAVKIMRRICIEA 355 (510)
Q Consensus 334 Eta~G~yP~~~V~~m~~i~~~a 355 (510)
=|- ...|.++-+.+..+.+..
T Consensus 171 T~G-~~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 171 SGG-AMSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp TTC-CCCHHHHHHHHHHHHHHS
T ss_pred CcC-ccCHHHHHHHHHHHHHhc
Confidence 444 445998888888876654
No 99
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=78.76 E-value=14 Score=36.14 Aligned_cols=128 Identities=15% Similarity=0.070 Sum_probs=76.5
Q ss_pred hccCcCCCCEEEEc-CCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccCC-CCchhHH
Q 010443 200 RWGVPNNIDMIALS-FVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGME-IPVEKIF 277 (510)
Q Consensus 200 ~~a~~~g~d~I~~s-fV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~e-~~~~~v~ 277 (510)
..+...|+|+|.+. -.-+.+++.++.+...+.| +.+++-+-|.+-++...+. -+|.|-+...||... .+++.+.
T Consensus 129 ~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lG--l~~lvev~t~ee~~~A~~~--Gad~IGv~~r~l~~~~~dl~~~~ 204 (272)
T 3qja_A 129 HEARAHGADMLLLIVAALEQSVLVSMLDRTESLG--MTALVEVHTEQEADRALKA--GAKVIGVNARDLMTLDVDRDCFA 204 (272)
T ss_dssp HHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHH--TCSEEEEESBCTTTCCBCTTHHH
T ss_pred HHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCC--CcEEEEcCCHHHHHHHHHC--CCCEEEECCCcccccccCHHHHH
Confidence 44567899999982 2334667777777776654 4456666665544433321 379998887676432 3333322
Q ss_pred HHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHH
Q 010443 278 LAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRR 350 (510)
Q Consensus 278 ~~qk~ii~~~~~~--gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~ 350 (510)
++ +... ++|++.. ...-|.+ |+......|+|++....---....|.++++.+..
T Consensus 205 ----~l---~~~v~~~~pvVae---------gGI~t~e---dv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~~ 260 (272)
T 3qja_A 205 ----RI---APGLPSSVIRIAE---------SGVRGTA---DLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVT 260 (272)
T ss_dssp ----HH---GGGSCTTSEEEEE---------SCCCSHH---HHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHT
T ss_pred ----HH---HHhCcccCEEEEE---------CCCCCHH---HHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHh
Confidence 22 2222 6777753 2333444 5566667899999986544444568777776543
No 100
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=78.62 E-value=14 Score=36.22 Aligned_cols=128 Identities=10% Similarity=0.011 Sum_probs=70.7
Q ss_pred ChhcHHHHHhccCcCCCC-EEEEcCC-----------CCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh--
Q 010443 191 TEKDKEDILRWGVPNNID-MIALSFV-----------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-- 256 (510)
Q Consensus 191 t~~D~~di~~~a~~~g~d-~I~~sfV-----------~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-- 256 (510)
+..|.....+.+.+.|+| +|-+.+- .+.+.+.++-+.+++. .+..++.|+=.--..+++.++++.
T Consensus 104 ~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~-~~~Pv~vKi~~~~~~~~~~~~a~~~~ 182 (311)
T 1jub_A 104 SAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTF-FTKPLGVKLPPYFDLVHFDIMAEILN 182 (311)
T ss_dssp SHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCSHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 334444443677788999 9988653 2556655555555543 257899998321122233333433
Q ss_pred ---cCeeEEeCCc---ccCC-------------C----CchhHHHHHHHHHHHHHH-c--CCCeEEehhhhHhhhcCCCC
Q 010443 257 ---TDSFMVARGD---LGME-------------I----PVEKIFLAQKMMIYKCNL-V--GKPVVTATQMLESMIKSPRP 310 (510)
Q Consensus 257 ---~DgI~IgrgD---Lg~e-------------~----~~~~v~~~qk~ii~~~~~-~--gkpvivaTqmLeSM~~~~~P 310 (510)
+|+|.+.-.- +..+ . +....+.... .+...++ . ..|+|...-+-
T Consensus 183 ~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~-~i~~v~~~~~~~ipvi~~GGI~--------- 252 (311)
T 1jub_A 183 QFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALA-NVRAFYTRLKPEIQIIGTGGIE--------- 252 (311)
T ss_dssp TSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHH-HHHHHHTTSCTTSEEEEESSCC---------
T ss_pred HcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHH-HHHHHHHhcCCCCCEEEECCCC---------
Confidence 5888764210 0001 0 2122333333 4444444 4 68888754432
Q ss_pred ChHhHHHHHHHHHcCCceEEec
Q 010443 311 TRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 311 traEv~Dv~~av~~G~D~imLs 332 (510)
...|+..++..|||++++.
T Consensus 253 ---~~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 253 ---TGQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp ---SHHHHHHHHHHTCSEEEEC
T ss_pred ---CHHHHHHHHHcCCCEEEEc
Confidence 2456677778899999997
No 101
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=78.22 E-value=1.6 Score=41.01 Aligned_cols=132 Identities=12% Similarity=0.059 Sum_probs=73.1
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceE-EEEecCHHHHhchHHHHh-hcCeeEEeCCcc----cCCCCc
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQL-MSKVENQEGVVNFDDILR-ETDSFMVARGDL----GMEIPV 273 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~I-iakIEt~~av~nldeI~~-~~DgI~IgrgDL----g~e~~~ 273 (510)
+.+.+.|+|+|.++-....+.++++.+.+++.|....+ +.-.-|.+ .+.++.+ -.|.+.+.+|-. |...+.
T Consensus 77 ~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~~---~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~ 153 (218)
T 3jr2_A 77 RMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTMQ---DAKAWVDLGITQAIYHRSRDAELAGIGWTT 153 (218)
T ss_dssp HHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCHH---HHHHHHHTTCCEEEEECCHHHHHHTCCSCH
T ss_pred HHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCHH---HHHHHHHcCccceeeeeccccccCCCcCCH
Confidence 34467899999998776666678887777766543332 32335653 3444444 367666544322 222222
Q ss_pred hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHH
Q 010443 274 EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 353 (510)
Q Consensus 274 ~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 353 (510)
+.+..+.+ .+....|+.+.-.+ .|..+ ..++..|+|++...+--.....|.+++ .+++.++
T Consensus 154 ~~l~~i~~-----~~~~~~pi~v~GGI--------~~~~~-----~~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~~~~ 214 (218)
T 3jr2_A 154 DDLDKMRQ-----LSALGIELSITGGI--------VPEDI-----YLFEGIKTKTFIAGRALAGAEGQQTAA-ALREQID 214 (218)
T ss_dssp HHHHHHHH-----HHHTTCEEEEESSC--------CGGGG-----GGGTTSCEEEEEESGGGSHHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHH-----HhCCCCCEEEECCC--------CHHHH-----HHHHHcCCCEEEEchhhcCCCCHHHHH-HHHHHHH
Confidence 23322221 12246676653221 22222 347778999999975444445688877 6666544
No 102
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=77.67 E-value=12 Score=35.38 Aligned_cols=145 Identities=13% Similarity=0.122 Sum_probs=81.4
Q ss_pred CCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHH-------Hh-hcCe
Q 010443 188 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDI-------LR-ETDS 259 (510)
Q Consensus 188 p~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI-------~~-~~Dg 259 (510)
|..|+.|.+.+.+-+.+.|++.++++ ++-+..+++.+. .+++.+-++.|.|....... ++ -+|+
T Consensus 15 p~~t~~~i~~l~~~a~~~g~~~v~v~----~~~v~~~~~~l~----~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Gad~ 86 (225)
T 1mzh_A 15 PHLSEKEIEEFVLKSEELGIYAVCVN----PYHVKLASSIAK----KVKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQE 86 (225)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHCS----SSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEC----HHHHHHHHHHhc----CCceeeEecCCCCccchhhhHHHHHHHHHcCCCE
Confidence 56788888887666678999998754 556777777664 57888888877776544322 11 1455
Q ss_pred eE--EeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEeccCCC
Q 010443 260 FM--VARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGESA 336 (510)
Q Consensus 260 I~--IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~Eta 336 (510)
|= +.-|-+- - .+...+. +.+++.+++..|+++-. ++| .+.-|..|+.+++. +...|+|++..|.--.
T Consensus 87 Id~viN~g~~~--~--~~~~~~~-~~i~~v~~a~~pv~vKv-i~e----~~~l~~~~~~~~a~~a~eaGad~I~tstg~~ 156 (225)
T 1mzh_A 87 LDIVWNLSAFK--S--EKYDFVV-EELKEIFRETPSAVHKV-IVE----TPYLNEEEIKKAVEICIEAGADFIKTSTGFA 156 (225)
T ss_dssp EEEECCHHHHH--T--TCHHHHH-HHHHHHHHTCTTSEEEE-ECC----GGGCCHHHHHHHHHHHHHHTCSEEECCCSCS
T ss_pred EEEEecHHHHh--c--CChHHHH-HHHHHHHHHhcCceEEE-EEe----CCCCCHHHHHHHHHHHHHhCCCEEEECCCCC
Confidence 54 1111110 0 0112233 33566666544876532 222 23346667777776 4667999994442111
Q ss_pred CCCCHHHHHHHHHH
Q 010443 337 AGAYPEIAVKIMRR 350 (510)
Q Consensus 337 ~G~yP~~~V~~m~~ 350 (510)
.|.+-.+.++.|.+
T Consensus 157 ~gga~~~~i~~v~~ 170 (225)
T 1mzh_A 157 PRGTTLEEVRLIKS 170 (225)
T ss_dssp SSCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH
Confidence 23344556655554
No 103
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=77.60 E-value=2.1 Score=40.56 Aligned_cols=127 Identities=8% Similarity=0.054 Sum_probs=62.1
Q ss_pred cHHHHHhccCcCCCCEEEEc-----CCCCHHH--HHHHHHHhccCCCCceEEEE--ecCHHHHhchHHHHhh-cCeeEEe
Q 010443 194 DKEDILRWGVPNNIDMIALS-----FVRKGSD--LVNVRKVLGPHAKNIQLMSK--VENQEGVVNFDDILRE-TDSFMVA 263 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~s-----fV~sa~d--v~~vr~~l~~~~~~~~Iiak--IEt~~av~nldeI~~~-~DgI~Ig 263 (510)
|...+.+...+.|+|+|.+. |...... ++++++.. ++.+++. |.+++- +++.++. +|+|.++
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~~-----~ipv~v~ggI~~~~~---~~~~l~~Gad~V~lg 104 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNRALIAEVAQAM-----DIKVELSGGIRDDDT---LAAALATGCTRVNLG 104 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCHHHHHHHHHHC-----SSEEEEESSCCSHHH---HHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChHHHHHHHHHhc-----CCcEEEECCcCCHHH---HHHHHHcCCCEEEEC
Confidence 43344356678999999873 4444433 44444332 3556554 666653 5555555 8999998
Q ss_pred CCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhH-h-hhcCC---CCChHhHHHHHHHHHcCCceEEeccCCCCC
Q 010443 264 RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLE-S-MIKSP---RPTRAEATDVANAVLDGTDCVMLSGESAAG 338 (510)
Q Consensus 264 rgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLe-S-M~~~~---~PtraEv~Dv~~av~~G~D~imLs~Eta~G 338 (510)
+..+.- |. .+.+..+.+|..++++-.... . .++.- .++..| .+..+...|+|.+.+++-+.-|
T Consensus 105 ~~~l~~-------p~---~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e--~~~~~~~~G~~~i~~~~~~~~~ 172 (244)
T 1vzw_A 105 TAALET-------PE---WVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYE--TLDRLNKEGCARYVVTDIAKDG 172 (244)
T ss_dssp HHHHHC-------HH---HHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHH--HHHHHHHTTCCCEEEEEC----
T ss_pred chHhhC-------HH---HHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHH--HHHHHHhCCCCEEEEeccCccc
Confidence 765522 11 233333444533433221110 0 00100 012222 2345666899999988665555
Q ss_pred CC
Q 010443 339 AY 340 (510)
Q Consensus 339 ~y 340 (510)
.+
T Consensus 173 ~~ 174 (244)
T 1vzw_A 173 TL 174 (244)
T ss_dssp --
T ss_pred cc
Confidence 43
No 104
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=77.30 E-value=24 Score=33.70 Aligned_cols=130 Identities=14% Similarity=0.085 Sum_probs=73.8
Q ss_pred hccCcCCCCEE--EE-cCCCCHH----HHHHHHHHhccCCCCceEEEEe----------cCHHHHhchHHHHhh-----c
Q 010443 200 RWGVPNNIDMI--AL-SFVRKGS----DLVNVRKVLGPHAKNIQLMSKV----------ENQEGVVNFDDILRE-----T 257 (510)
Q Consensus 200 ~~a~~~g~d~I--~~-sfV~sa~----dv~~vr~~l~~~~~~~~IiakI----------Et~~av~nldeI~~~-----~ 257 (510)
+.+++.|+|.| .+ ....+.+ ++.++.+.+.+.| +.++..+ -+.+ ++++.+.. +
T Consensus 106 ~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g--~~viv~~~~~G~~l~~~~~~~---~~~~~a~~a~~~Ga 180 (273)
T 2qjg_A 106 EEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG--MPLIAMMYPRGKHIQNERDPE---LVAHAARLGAELGA 180 (273)
T ss_dssp HHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT--CCEEEEEEECSTTCSCTTCHH---HHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC--CCEEEEeCCCCcccCCCCCHh---HHHHHHHHHHHcCC
Confidence 55678899999 33 2222322 3555555554433 4455544 2222 33333222 6
Q ss_pred CeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCC-ChHhHHH-HHHHHHcCCceEEeccCC
Q 010443 258 DSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRP-TRAEATD-VANAVLDGTDCVMLSGES 335 (510)
Q Consensus 258 DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~P-traEv~D-v~~av~~G~D~imLs~Et 335 (510)
|.|-++.+ .+++.+ +++ +...+.|++.+.-+ .+ +..+... +..++..|+|+++....-
T Consensus 181 d~i~~~~~-----~~~~~l----~~i---~~~~~ipvva~GGi--------~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i 240 (273)
T 2qjg_A 181 DIVKTSYT-----GDIDSF----RDV---VKGCPAPVVVAGGP--------KTNTDEEFLQMIKDAMEAGAAGVAVGRNI 240 (273)
T ss_dssp SEEEECCC-----SSHHHH----HHH---HHHCSSCEEEECCS--------CCSSHHHHHHHHHHHHHHTCSEEECCHHH
T ss_pred CEEEECCC-----CCHHHH----HHH---HHhCCCCEEEEeCC--------CCCCHHHHHHHHHHHHHcCCcEEEeeHHh
Confidence 88888741 233222 222 33457898875321 22 2333322 666778899999997766
Q ss_pred CCCCCHHHHHHHHHHHHHH
Q 010443 336 AAGAYPEIAVKIMRRICIE 354 (510)
Q Consensus 336 a~G~yP~~~V~~m~~i~~~ 354 (510)
.....|.++++.+.+++++
T Consensus 241 ~~~~~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 241 FQHDDVVGITRAVCKIVHE 259 (273)
T ss_dssp HTSSSHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHhc
Confidence 6667899988888877654
No 105
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=76.15 E-value=16 Score=34.46 Aligned_cols=118 Identities=10% Similarity=0.055 Sum_probs=65.4
Q ss_pred HHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeE-E-e-CCcccCCCCc
Q 010443 197 DILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFM-V-A-RGDLGMEIPV 273 (510)
Q Consensus 197 di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~-I-g-rgDLg~e~~~ 273 (510)
.+ +.+.+.|+|+|.++.. ..++..++.+.+++.|. .++.-+......+.+..+.+.+|+++ + . +|-.|..-+.
T Consensus 100 ~~-~~~~~~Gad~v~~~~~-~~~~~~~~~~~~~~~g~--~~~~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~~ 175 (248)
T 1geq_A 100 FL-AEAKASGVDGILVVDL-PVFHAKEFTEIAREEGI--KTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREEI 175 (248)
T ss_dssp HH-HHHHHHTCCEEEETTC-CGGGHHHHHHHHHHHTC--EEEEEECTTCCHHHHHHHHHHCSSEEEEECCC-------CC
T ss_pred HH-HHHHHCCCCEEEECCC-ChhhHHHHHHHHHHhCC--CeEEEECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCCCC
Confidence 45 5668889999999854 45678888777776653 34444543334455677777778443 2 2 2223332111
Q ss_pred hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 274 EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 274 ~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
. +...+.+-+.+...+.|+++..- .=+ ..++..+...|+|++.+.
T Consensus 176 ~--~~~~~~i~~l~~~~~~pi~~~GG---------I~~---~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 176 P--KTAYDLLRRAKRICRNKVAVGFG---------VSK---REHVVSLLKEGANGVVVG 220 (248)
T ss_dssp C--HHHHHHHHHHHHHCSSCEEEESC---------CCS---HHHHHHHHHTTCSEEEEC
T ss_pred C--hhHHHHHHHHHhhcCCCEEEEee---------cCC---HHHHHHHHHcCCCEEEEc
Confidence 1 12222222233334789877543 222 245566667899999986
No 106
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=75.91 E-value=9.9 Score=37.14 Aligned_cols=148 Identities=18% Similarity=0.180 Sum_probs=86.3
Q ss_pred CCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeEEeCCc
Q 010443 188 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGD 266 (510)
Q Consensus 188 p~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~IgrgD 266 (510)
|..|+.|.+.+.+-+.+.|+..|+++ +..+..+++.|. +.+++|.+=|=.|.|-...+.-+.. .+++--|.-+
T Consensus 54 p~~t~~~I~~lc~eA~~~~~aaVCV~----p~~V~~a~~~L~--gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 127 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENRFHGVCVN----PCYVKLAREELE--GTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADE 127 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHHT--TSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhc--CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 56688888777678889999999985 567888888884 4467888877666655433322211 1111111111
Q ss_pred ccCCCCc--------hhHHHHHHHHHHHHHHcCCCe--EEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEeccCC
Q 010443 267 LGMEIPV--------EKIFLAQKMMIYKCNLVGKPV--VTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGES 335 (510)
Q Consensus 267 Lg~e~~~--------~~v~~~qk~ii~~~~~~gkpv--ivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~Et 335 (510)
+-+-+++ +.+..-.+.+.++|. |+|+ |+-|-. -|..|+..... +...|+|.|=-|.==
T Consensus 128 IDmViNig~lk~g~~~~v~~eI~~v~~a~~--~~~lKVIlEt~~---------Lt~eei~~A~~ia~eaGADfVKTSTGf 196 (260)
T 3r12_A 128 IDMVINVGMLKAKEWEYVYEDIRSVVESVK--GKVVKVIIETCY---------LDTEEKIAACVISKLAGAHFVKTSTGF 196 (260)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHTT--TSEEEEECCGGG---------CCHHHHHHHHHHHHHTTCSEEECCCSS
T ss_pred EEEEeehhhhccccHHHHHHHHHHHHHhcC--CCcEEEEEeCCC---------CCHHHHHHHHHHHHHhCcCEEEcCCCC
Confidence 1112222 233333344545543 4553 444432 36778877666 667899998766211
Q ss_pred CCCCCHHHHHHHHHHHH
Q 010443 336 AAGAYPEIAVKIMRRIC 352 (510)
Q Consensus 336 a~G~yP~~~V~~m~~i~ 352 (510)
..|.--++.|+.|++.+
T Consensus 197 ~~~GAT~edV~lm~~~v 213 (260)
T 3r12_A 197 GTGGATAEDVHLMKWIV 213 (260)
T ss_dssp SSCCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHh
Confidence 12233568899998864
No 107
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=75.67 E-value=16 Score=38.82 Aligned_cols=114 Identities=16% Similarity=0.122 Sum_probs=71.1
Q ss_pred hccCcCCCCEEEEcCC--CC---HHHHHHHHHHhccCCCC-ce-EEEEecCHHHHhchHHHHhhcCeeEEeCCcccC---
Q 010443 200 RWGVPNNIDMIALSFV--RK---GSDLVNVRKVLGPHAKN-IQ-LMSKVENQEGVVNFDDILRETDSFMVARGDLGM--- 269 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV--~s---a~dv~~vr~~l~~~~~~-~~-IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~--- 269 (510)
+...+.|++.+.+..- .+ .+.++.+++.. .+ +. ++.-+.|++..+.+.+. -+|++.+|.|-=+.
T Consensus 248 ~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~----~~~~~Vi~G~V~t~~~a~~l~~a--Gad~I~Vg~~~g~~~~~ 321 (503)
T 1me8_A 248 PALVEAGADVLCIDSSDGFSEWQKITIGWIREKY----GDKVKVGAGNIVDGEGFRYLADA--GADFIKIGIGGGSICIT 321 (503)
T ss_dssp HHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHH----GGGSCEEEEEECSHHHHHHHHHH--TCSEEEECSSCSTTCCS
T ss_pred HHHHhhhccceEEecccCcccchhhHHHHHHHhC----CCCceEeeccccCHHHHHHHHHh--CCCeEEecccCCcCccc
Confidence 5567789998877322 22 22333334332 22 44 45678888887665442 38999987533111
Q ss_pred ----CCCchhHHHHHHHHHHHHHHc------CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 270 ----EIPVEKIFLAQKMMIYKCNLV------GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 270 ----e~~~~~v~~~qk~ii~~~~~~------gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
..+.+ -..+...+.++|+.. +.|+|.+.-+. --.|++.|+..|||++|+.
T Consensus 322 r~~~~~g~p-~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~------------~~~di~kAlalGA~~V~iG 381 (503)
T 1me8_A 322 REQKGIGRG-QATAVIDVVAERNKYFEETGIYIPVCSDGGIV------------YDYHMTLALAMGADFIMLG 381 (503)
T ss_dssp TTTTCCCCC-HHHHHHHHHHHHHHHHHHHSEECCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred ccccCCCCc-hHHHHHHHHHHHHHHhhhcCCCceEEEeCCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 11223 234446677777776 89999765543 2468899999999999995
No 108
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=75.51 E-value=17 Score=37.19 Aligned_cols=112 Identities=15% Similarity=0.231 Sum_probs=61.1
Q ss_pred cCcCCCCEEEEc-------CCC---CHHHHHHHHHHhccCCCCceEEEE-ecCHHHHhchHHHHhhcCeeEEeCCcccC-
Q 010443 202 GVPNNIDMIALS-------FVR---KGSDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRETDSFMVARGDLGM- 269 (510)
Q Consensus 202 a~~~g~d~I~~s-------fV~---sa~dv~~vr~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~~DgI~IgrgDLg~- 269 (510)
+.+.|+|++.+. +.. +.+++..+++.. +++++++ |-|++....+.+ .-+|+|++++|--+.
T Consensus 174 ~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~-----~~pvi~ggi~t~e~a~~~~~--~Gad~i~vg~Gg~~~~ 246 (393)
T 2qr6_A 174 VIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL-----DVPVIAGGVNDYTTALHMMR--TGAVGIIVGGGENTNS 246 (393)
T ss_dssp HHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC-----SSCEEEECCCSHHHHHHHHT--TTCSEEEESCCSCCHH
T ss_pred HHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc-----CCCEEECCcCCHHHHHHHHH--cCCCEEEECCCccccc
Confidence 346799988765 222 345566666543 4667764 555544333222 127999998743211
Q ss_pred ---CCCchhHHHHHHHHHHHH----HHcC---CCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 270 ---EIPVEKIFLAQKMMIYKC----NLVG---KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 270 ---e~~~~~v~~~qk~ii~~~----~~~g---kpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
..+.+.+ ..-.++.+++ .+.+ .|+|.+.-+- --.|+..++..|||++++..
T Consensus 247 ~~~~~g~~~~-~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~------------~~~dv~kalalGA~~V~iG~ 307 (393)
T 2qr6_A 247 LALGMEVSMA-TAIADVAAARRDYLDETGGRYVHIIADGSIE------------NSGDVVKAIACGADAVVLGS 307 (393)
T ss_dssp HHTSCCCCHH-HHHHHHHHHHHHHHHHHTSCCCEEEECSSCC------------SHHHHHHHHHHTCSEEEECG
T ss_pred ccCCCCCChH-HHHHHHHHHHHHhHhhcCCcceEEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 1112211 1122233332 2245 8888765432 24688999999999999953
No 109
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=75.43 E-value=25 Score=36.86 Aligned_cols=121 Identities=17% Similarity=0.196 Sum_probs=72.7
Q ss_pred hcHHHHHhccCcCCCCEEEEcCCC--CH---HHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCc-
Q 010443 193 KDKEDILRWGVPNNIDMIALSFVR--KG---SDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGD- 266 (510)
Q Consensus 193 ~D~~di~~~a~~~g~d~I~~sfV~--sa---~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgD- 266 (510)
...+.+ +++.+.|+|.|.+.... .. +.+..+++.+ ..-+.+...+-+.+....+.+ .-+|+|.+|-|-
T Consensus 233 ~~~~~a-~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~---p~~pvi~G~v~t~~~a~~~~~--~Gad~I~vg~g~g 306 (491)
T 1zfj_A 233 DTFERA-EALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHF---PNRTLIAGNIATAEGARALYD--AGVDVVKVGIGPG 306 (491)
T ss_dssp THHHHH-HHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHC---SSSCEEEEEECSHHHHHHHHH--TTCSEEEECSSCC
T ss_pred hHHHHH-HHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHC---CCCcEeCCCccCHHHHHHHHH--cCCCEEEECccCC
Confidence 345666 67788999999987532 11 2333344333 122334456666655543322 237999997531
Q ss_pred -ccC-----CCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 267 -LGM-----EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 267 -Lg~-----e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
... ..+.+ .....+++..+++..+.|+|.+.-+- -..|+..++..|||++++.
T Consensus 307 ~~~~tr~~~~~~~p-~~~~l~~~~~~~~~~~ipvia~GGi~------------~~~di~kal~~GA~~v~vG 365 (491)
T 1zfj_A 307 SICTTRVVAGVGVP-QVTAIYDAAAVAREYGKTIIADGGIK------------YSGDIVKALAAGGNAVMLG 365 (491)
T ss_dssp TTBCHHHHTCCCCC-HHHHHHHHHHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred cceEEeeecCCCCC-cHHHHHHHHHHHhhcCCCEEeeCCCC------------CHHHHHHHHHcCCcceeeC
Confidence 000 11122 23444677777888899998755432 2468899999999999994
No 110
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=75.42 E-value=10 Score=36.55 Aligned_cols=149 Identities=12% Similarity=0.104 Sum_probs=87.5
Q ss_pred CCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHH--------hhcCe
Q 010443 188 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDIL--------RETDS 259 (510)
Q Consensus 188 p~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~--------~~~Dg 259 (510)
|..|+.|.+.+.+-+.+.|+..|+++ +..+..+++.|. +.++++.+=|=-|.|-...+.-+ .-+|.
T Consensus 38 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~~~L~--~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 111 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYKFASVCVN----PTWVPLCAELLK--GTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEE 111 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHHT--TSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhC--CCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCE
Confidence 56788888777678888999999985 567888888885 34577777775555443332222 11343
Q ss_pred eE--EeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEeccCCC
Q 010443 260 FM--VARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGESA 336 (510)
Q Consensus 260 I~--IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~Eta 336 (510)
|= |..|-|- +=.++.+..-.+.+.++|...-.+||+-|-.| |..|+..... +...|+|.|=-|.==.
T Consensus 112 IDmViNig~lk-~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---------t~eei~~a~~ia~~aGADfVKTSTGf~ 181 (239)
T 3ngj_A 112 VDMVINIGMVK-AKKYDDVEKDVKAVVDASGKALTKVIIECCYL---------TNEEKVEVCKRCVAAGAEYVKTSTGFG 181 (239)
T ss_dssp EEEECCHHHHH-TTCHHHHHHHHHHHHHHHTTSEEEEECCGGGS---------CHHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred EEEEeehHHhc-cccHHHHHHHHHHHHHHhcCCceEEEEecCCC---------CHHHHHHHHHHHHHHCcCEEECCCCCC
Confidence 32 1222110 00112344444556666643324556655433 6677766655 5678999987662111
Q ss_pred CCCCHHHHHHHHHHHH
Q 010443 337 AGAYPEIAVKIMRRIC 352 (510)
Q Consensus 337 ~G~yP~~~V~~m~~i~ 352 (510)
.|---.+.|+.|++.+
T Consensus 182 ~ggAt~~dv~lmr~~v 197 (239)
T 3ngj_A 182 THGATPEDVKLMKDTV 197 (239)
T ss_dssp SCCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhh
Confidence 2233468899998865
No 111
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=74.86 E-value=14 Score=35.02 Aligned_cols=130 Identities=14% Similarity=0.103 Sum_probs=71.0
Q ss_pred HHHHhccCcCCCCEEEEcCC--CCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccC--CC
Q 010443 196 EDILRWGVPNNIDMIALSFV--RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGM--EI 271 (510)
Q Consensus 196 ~di~~~a~~~g~d~I~~sfV--~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~--e~ 271 (510)
+++ ..+.+.|+|+|.+--. .+++.+.++-+.+++. +..+++.+-|.+-.+.+.+ .-+|.|-+.--.+.. ..
T Consensus 92 ~~i-~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~eea~~a~~--~Gad~Ig~~~~g~t~~~~~ 166 (229)
T 3q58_A 92 QDV-DALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH--GLLAMADCSTVNEGISCHQ--KGIEFIGTTLSGYTGPITP 166 (229)
T ss_dssp HHH-HHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECSSHHHHHHHHH--TTCSEEECTTTTSSSSCCC
T ss_pred HHH-HHHHHcCCCEEEECccccCChHHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHh--CCCCEEEecCccCCCCCcC
Confidence 345 4457789999876433 3566777766666654 5677777665443332221 126877543111211 11
Q ss_pred CchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHH
Q 010443 272 PVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRR 350 (510)
Q Consensus 272 ~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~ 350 (510)
....+. .-+++ ++.+.|++.... .-|. .|+..+...|+|++++. |++.+ |....+.+.+
T Consensus 167 ~~~~~~-li~~l----~~~~ipvIA~GG---------I~t~---~d~~~~~~~GadgV~VG--sai~~-p~~~~~~f~~ 225 (229)
T 3q58_A 167 VEPDLA-MVTQL----SHAGCRVIAEGR---------YNTP---ALAANAIEHGAWAVTVG--SAITR-IEHICQWFSH 225 (229)
T ss_dssp SSCCHH-HHHHH----HTTTCCEEEESS---------CCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHHH
T ss_pred CCCCHH-HHHHH----HHcCCCEEEECC---------CCCH---HHHHHHHHcCCCEEEEc--hHhcC-hHHHHHHHHH
Confidence 112221 11222 223899887433 3344 45666777899999996 55554 6555555443
No 112
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=74.46 E-value=7.7 Score=37.96 Aligned_cols=115 Identities=10% Similarity=0.078 Sum_probs=68.1
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEe---CCcccCCCCchhH
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVA---RGDLGMEIPVEKI 276 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~Ig---rgDLg~e~~~~~v 276 (510)
+.+.+.|+|++++|=.- .++..++++.+++.|-+...++-=.| ..+.+..|++.++|.+-. .|=-|..- .+
T Consensus 117 ~~~~~aGvdgvii~Dlp-~ee~~~~~~~~~~~gl~~i~liaP~t--~~eri~~i~~~~~gfvY~vS~~GvTG~~~---~~ 190 (267)
T 3vnd_A 117 TKAQAAGVDSVLIADVP-VEESAPFSKAAKAHGIAPIFIAPPNA--DADTLKMVSEQGEGYTYLLSRAGVTGTES---KA 190 (267)
T ss_dssp HHHHHHTCCEEEETTSC-GGGCHHHHHHHHHTTCEEECEECTTC--CHHHHHHHHHHCCSCEEESCCCCCC---------
T ss_pred HHHHHcCCCEEEeCCCC-HhhHHHHHHHHHHcCCeEEEEECCCC--CHHHHHHHHHhCCCcEEEEecCCCCCCcc---CC
Confidence 45577899999998554 46788888888877643222222222 357899999998765433 22223321 12
Q ss_pred HHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 277 FLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 277 ~~~qk~ii~~~~~~-gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
+.-....++..+++ ..|+++-.. .=|. .++..++..|+|+++..
T Consensus 191 ~~~~~~~v~~vr~~~~~pv~vGfG---------I~~~---e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 191 GEPIENILTQLAEFNAPPPLLGFG---------IAEP---EQVRAAIKAGAAGAISG 235 (267)
T ss_dssp --CHHHHHHHHHTTTCCCEEECSS---------CCSH---HHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHHHHHhcCCCEEEECC---------cCCH---HHHHHHHHcCCCEEEEC
Confidence 23334555555554 679887432 2222 34455788999999986
No 113
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=74.29 E-value=6.5 Score=41.88 Aligned_cols=52 Identities=25% Similarity=0.368 Sum_probs=43.7
Q ss_pred CCeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 010443 20 PKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAA 71 (510)
Q Consensus 20 ~~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~ 71 (510)
.+-.+-+.+|...+..+.++.|+++|+++.-||++|+..+.+.+.++.+|+.
T Consensus 218 grL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~ 269 (496)
T 4fxs_A 218 GRLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA 269 (496)
T ss_dssp SCBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH
T ss_pred cceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHH
Confidence 3556778899888899999999999999999999999887766677666653
No 114
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=72.49 E-value=9.6 Score=37.35 Aligned_cols=115 Identities=9% Similarity=0.073 Sum_probs=68.1
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEe--C-CcccCCCCchhH
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVA--R-GDLGMEIPVEKI 276 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~Ig--r-gDLg~e~~~~~v 276 (510)
+.+.+.|+|++++|=.- .++..++++.+++.|-+ .|-.+=.....+.+..|++.++|++-. + |==|..-. +
T Consensus 119 ~~~~~aGvdGvIipDlp-~ee~~~~~~~~~~~gl~--~I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~---~ 192 (271)
T 3nav_A 119 QRCQKAGVDSVLIADVP-TNESQPFVAAAEKFGIQ--PIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAETK---A 192 (271)
T ss_dssp HHHHHHTCCEEEETTSC-GGGCHHHHHHHHHTTCE--EEEEECTTCCHHHHHHHHHHCCSCEEECCCC-----------C
T ss_pred HHHHHCCCCEEEECCCC-HHHHHHHHHHHHHcCCe--EEEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCcccC---C
Confidence 55678899999998653 36677888888776644 333332212357899999988765432 2 22222221 1
Q ss_pred HHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 277 FLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 277 ~~~qk~ii~~~~~~-gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
+.-....++..+++ ..|+++... .=|. .++..++..|+|+++..
T Consensus 193 ~~~~~~~v~~vr~~~~~Pv~vGfG---------Ist~---e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 193 NMPVHALLERLQQFDAPPALLGFG---------ISEP---AQVKQAIEAGAAGAISG 237 (271)
T ss_dssp CHHHHHHHHHHHHTTCCCEEECSS---------CCSH---HHHHHHHHTTCSEEEES
T ss_pred chhHHHHHHHHHHhcCCCEEEECC---------CCCH---HHHHHHHHcCCCEEEEC
Confidence 22344555555664 679987433 2222 34566888999999985
No 115
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=71.88 E-value=91 Score=31.72 Aligned_cols=155 Identities=13% Similarity=0.098 Sum_probs=99.2
Q ss_pred CCChhcHHHHHhccCcCCCCEEEEcC-CCCHHHHHHHHHHhccCCCCceEEEEe-cCHHHHhchHHHHhh-cC--eeEEe
Q 010443 189 TLTEKDKEDILRWGVPNNIDMIALSF-VRKGSDLVNVRKVLGPHAKNIQLMSKV-ENQEGVVNFDDILRE-TD--SFMVA 263 (510)
Q Consensus 189 ~lt~~D~~di~~~a~~~g~d~I~~sf-V~sa~dv~~vr~~l~~~~~~~~IiakI-Et~~av~nldeI~~~-~D--gI~Ig 263 (510)
.++..|+..|.+...+.|++.|=+-| ..++.+.+.++.+. +.+....+.+.. ...+. ++..++. .| .++++
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~-~~~~~~~v~~~~r~~~~d---i~~a~~~g~~~v~i~~~ 96 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLA-SLGLKAKVVTHIQCRLDA---AKVAVETGVQGIDLLFG 96 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHH-TSCCSSEEEEEEESCHHH---HHHHHHTTCSEEEEEEC
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHHHH-hcCCCcEEEEEcccChhh---HHHHHHcCCCEEEEEec
Confidence 46778888876777779999999966 45666666666544 345556665543 12333 3333332 45 44455
Q ss_pred CCcccCC---CCchhHHHHHHHHHHHHHHcC--CCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCC
Q 010443 264 RGDLGME---IPVEKIFLAQKMMIYKCNLVG--KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAG 338 (510)
Q Consensus 264 rgDLg~e---~~~~~v~~~qk~ii~~~~~~g--kpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G 338 (510)
-.|+-.. ...+++....+..++.++++| ..+.+. +...++-+...+.+++.++.+-+|.|.|. +|.=.
T Consensus 97 ~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~------~ed~~~~~~~~~~~~~~~~~~~a~~i~l~-DT~G~ 169 (382)
T 2ztj_A 97 TSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFS------AEDTFRSEEQDLLAVYEAVAPYVDRVGLA-DTVGV 169 (382)
T ss_dssp C--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEE------ETTTTTSCHHHHHHHHHHHGGGCSEEEEE-ETTSC
T ss_pred cCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEE------EEeCCCCCHHHHHHHHHHHHHhcCEEEec-CCCCC
Confidence 4442222 234566677788999999999 555432 22445666777888888666659999986 78777
Q ss_pred CCHHHHHHHHHHHHHH
Q 010443 339 AYPEIAVKIMRRICIE 354 (510)
Q Consensus 339 ~yP~~~V~~m~~i~~~ 354 (510)
..|.++-+.++.+...
T Consensus 170 ~~P~~~~~lv~~l~~~ 185 (382)
T 2ztj_A 170 ATPRQVYALVREVRRV 185 (382)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 8899999888887654
No 116
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=71.81 E-value=27 Score=32.60 Aligned_cols=130 Identities=13% Similarity=0.122 Sum_probs=75.4
Q ss_pred HHHHhccCcCCCCEEEEc-----CCCC----HHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeEEeCC
Q 010443 196 EDILRWGVPNNIDMIALS-----FVRK----GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARG 265 (510)
Q Consensus 196 ~di~~~a~~~g~d~I~~s-----fV~s----a~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~Igrg 265 (510)
+++ +.+.+.|+|++-+= |+.. .+.++++++... ....+--++..++ +.++..+++ +|++.+--+
T Consensus 23 ~~i-~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~---~~~~v~lmv~d~~--~~i~~~~~agad~v~vH~~ 96 (228)
T 1h1y_A 23 AEA-DRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTK---AYLDCHLMVTNPS--DYVEPLAKAGASGFTFHIE 96 (228)
T ss_dssp HHH-HHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCC---SEEEEEEESSCGG--GGHHHHHHHTCSEEEEEGG
T ss_pred HHH-HHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcC---CcEEEEEEecCHH--HHHHHHHHcCCCEEEECCC
Confidence 455 66778899987655 6665 677777776541 1233446776653 346776665 799987522
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHc---CCceEEecc-C-CC-CCC
Q 010443 266 DLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD---GTDCVMLSG-E-SA-AGA 339 (510)
Q Consensus 266 DLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~---G~D~imLs~-E-ta-~G~ 339 (510)
.. + ....+.++.++++|+.++++.. |. |..|. ...+.+ ++|.+.+.+ + +. --+
T Consensus 97 ~~--~-------~~~~~~~~~i~~~g~~igv~~~--------p~-t~~e~---~~~~~~~~~~~d~vl~~sv~pg~~g~~ 155 (228)
T 1h1y_A 97 VS--R-------DNWQELIQSIKAKGMRPGVSLR--------PG-TPVEE---VFPLVEAENPVELVLVMTVEPGFGGQK 155 (228)
T ss_dssp GC--T-------TTHHHHHHHHHHTTCEEEEEEC--------TT-SCGGG---GHHHHHSSSCCSEEEEESSCTTCSSCC
T ss_pred Cc--c-------cHHHHHHHHHHHcCCCEEEEEe--------CC-CCHHH---HHHHHhcCCCCCEEEEEeecCCCCccc
Confidence 11 1 1114567777889999997641 11 22221 234556 999998832 1 11 124
Q ss_pred CHHHHHHHHHHHH
Q 010443 340 YPEIAVKIMRRIC 352 (510)
Q Consensus 340 yP~~~V~~m~~i~ 352 (510)
|+-..++.++++.
T Consensus 156 ~~~~~l~~i~~~~ 168 (228)
T 1h1y_A 156 FMPEMMEKVRALR 168 (228)
T ss_dssp CCGGGHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 6655565555544
No 117
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=71.54 E-value=29 Score=32.88 Aligned_cols=113 Identities=10% Similarity=0.084 Sum_probs=71.9
Q ss_pred CChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEe--cCH-------HHHhchHHHHhh-cCe
Q 010443 190 LTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV--ENQ-------EGVVNFDDILRE-TDS 259 (510)
Q Consensus 190 lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakI--Et~-------~av~nldeI~~~-~Dg 259 (510)
-++.+...+.+.+.+.|+.+|.+ .+.++++++|+.. +++|+..+ .-. .-++.+++..+. +|.
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~ 104 (229)
T 3q58_A 33 DKPEIVAAMAQAAASAGAVAVRI---EGIENLRTVRPHL-----SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADI 104 (229)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHGGGC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSE
T ss_pred CCcchHHHHHHHHHHCCCcEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCE
Confidence 35567777756677789999987 5899999998765 34555432 100 013345555555 799
Q ss_pred eEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEe
Q 010443 260 FMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 331 (510)
Q Consensus 260 I~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imL 331 (510)
|.+.-..+ ... ...+++++.++++|.+++.-. .|..|. ..+...|+|.+-.
T Consensus 105 I~l~~~~~---~~p----~~l~~~i~~~~~~g~~v~~~v-----------~t~eea---~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 105 IAFDASFR---SRP----VDIDSLLTRIRLHGLLAMADC-----------STVNEG---ISCHQKGIEFIGT 155 (229)
T ss_dssp EEEECCSS---CCS----SCHHHHHHHHHHTTCEEEEEC-----------SSHHHH---HHHHHTTCSEEEC
T ss_pred EEECcccc---CCh----HHHHHHHHHHHHCCCEEEEec-----------CCHHHH---HHHHhCCCCEEEe
Confidence 98864322 111 234567788888899988642 244443 4677889999963
No 118
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=70.65 E-value=29 Score=31.97 Aligned_cols=123 Identities=16% Similarity=0.094 Sum_probs=67.4
Q ss_pred cCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHh-hcCeeEEeCC-c------ccCCCCc
Q 010443 202 GVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR-ETDSFMVARG-D------LGMEIPV 273 (510)
Q Consensus 202 a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~-~~DgI~Igrg-D------Lg~e~~~ 273 (510)
+.+.|+|+|.++... .++.++++.+. . ..+-.-..|.+-+ ....+ -+|++++++. + .+...++
T Consensus 90 a~~~gad~v~l~~~~--~~~~~~~~~~g---~-~~~~~s~~t~~e~---~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~ 160 (227)
T 2tps_A 90 ALNLKADGIHIGQED--ANAKEVRAAIG---D-MILGVSAHTMSEV---KQAEEDGADYVGLGPIYPTETKKDTRAVQGV 160 (227)
T ss_dssp HHHHTCSEEEECTTS--SCHHHHHHHHT---T-SEEEEEECSHHHH---HHHHHHTCSEEEECCSSCCCSSSSCCCCCTT
T ss_pred HHHcCCCEEEECCCc--cCHHHHHHhcC---C-cEEEEecCCHHHH---HHHHhCCCCEEEECCCcCCCCCCCCCCccCH
Confidence 456799999986543 34666665542 2 2222223555432 22222 3799998531 1 1223344
Q ss_pred hhHHHHHHHHHHHHHHcC-CCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHH
Q 010443 274 EKIFLAQKMMIYKCNLVG-KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRIC 352 (510)
Q Consensus 274 ~~v~~~qk~ii~~~~~~g-kpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~ 352 (510)
+.+..+ +.... .|++.+.-+ .|. ++..+...|+|++.++.--...+.|.+.++.+.+.+
T Consensus 161 ~~l~~~-------~~~~~~~pvia~GGI--------~~~-----nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~ 220 (227)
T 2tps_A 161 SLIEAV-------RRQGISIPIVGIGGI--------TID-----NAAPVIQAGADGVSMISAISQAEDPESAARKFREEI 220 (227)
T ss_dssp HHHHHH-------HHTTCCCCEEEESSC--------CTT-----TSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHH-------HHhCCCCCEEEEcCC--------CHH-----HHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHHHH
Confidence 443332 22335 898876432 122 345566679999999765444467877777766655
Q ss_pred H
Q 010443 353 I 353 (510)
Q Consensus 353 ~ 353 (510)
+
T Consensus 221 ~ 221 (227)
T 2tps_A 221 Q 221 (227)
T ss_dssp H
T ss_pred H
Confidence 4
No 119
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=70.47 E-value=22 Score=32.38 Aligned_cols=108 Identities=11% Similarity=0.103 Sum_probs=64.9
Q ss_pred ChhcHHHHHhccCcCCCCEEEEcCCC-CH-HHHHHHHHHhccCCCCceEEE-EecCHHHHhchHHHHh-hcCeeEEeCCc
Q 010443 191 TEKDKEDILRWGVPNNIDMIALSFVR-KG-SDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILR-ETDSFMVARGD 266 (510)
Q Consensus 191 t~~D~~di~~~a~~~g~d~I~~sfV~-sa-~dv~~vr~~l~~~~~~~~Iia-kIEt~~av~nldeI~~-~~DgI~IgrgD 266 (510)
+..+...+.+.+.+.|+++|-+.+-. .+ +.++.+|+.+. .+..|-+ .+.|++-+ ++-.+ -+|.+ ++++-
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~---~~~~ig~~~v~~~~~~---~~a~~~Gad~i-v~~~~ 92 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKE---KGAIIGAGTVTSVEQC---RKAVESGAEFI-VSPHL 92 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH---TTCEEEEESCCSHHHH---HHHHHHTCSEE-ECSSC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC---CCcEEEecccCCHHHH---HHHHHcCCCEE-EcCCC
Confidence 34444444456677899999875432 22 23666666553 2333333 44555432 22222 37999 77652
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 267 LGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 267 Lg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
+ ..+++.|+++|+|++.- ..|.. ++..++..|+|.+-+.
T Consensus 93 -----~--------~~~~~~~~~~g~~vi~g-----------~~t~~---e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 93 -----D--------EEISQFCKEKGVFYMPG-----------VMTPT---ELVKAMKLGHTILKLF 131 (205)
T ss_dssp -----C--------HHHHHHHHHHTCEEECE-----------ECSHH---HHHHHHHTTCCEEEET
T ss_pred -----C--------HHHHHHHHHcCCcEECC-----------cCCHH---HHHHHHHcCCCEEEEc
Confidence 1 45888999999999851 12333 4667889999998763
No 120
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=70.38 E-value=14 Score=36.08 Aligned_cols=109 Identities=17% Similarity=0.228 Sum_probs=70.2
Q ss_pred cHHHHHhccCcCCCCEEEEc-----CCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhc---hHHHHhh-cCeeEEeC
Q 010443 194 DKEDILRWGVPNNIDMIALS-----FVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVN---FDDILRE-TDSFMVAR 264 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~s-----fV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~n---ldeI~~~-~DgI~Igr 264 (510)
|...+.+...+.|+++|.+- |-.+.++++.+|+.. ++.++.| +.+-+ +++-.+. +|+|.++-
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v-----~lPvl~k----dfiid~~qv~~A~~~GAD~VlLi~ 143 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV-----SIPVLRK----DFVVQPYQIHEARAHGADMLLLIV 143 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC-----SSCEEEE----SCCCSHHHHHHHHHTTCSEEEEEG
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC-----CCCEEEC----ccccCHHHHHHHHHcCCCEEEEec
Confidence 33344344466899999874 233578888888765 4667655 23322 3333332 79999987
Q ss_pred CcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 265 GDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 265 gDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
.+|. +.-.++++..|++.|..+++.++ |..| +..|...|+|.+-.++
T Consensus 144 a~l~--------~~~l~~l~~~a~~lGl~~lvev~-----------t~ee---~~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 144 AALE--------QSVLVSMLDRTESLGMTALVEVH-----------TEQE---ADRALKAGAKVIGVNA 190 (272)
T ss_dssp GGSC--------HHHHHHHHHHHHHTTCEEEEEES-----------SHHH---HHHHHHHTCSEEEEES
T ss_pred ccCC--------HHHHHHHHHHHHHCCCcEEEEcC-----------CHHH---HHHHHHCCCCEEEECC
Confidence 7774 22346678889999999887532 3344 3456677999998874
No 121
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=70.06 E-value=12 Score=35.42 Aligned_cols=133 Identities=10% Similarity=0.069 Sum_probs=65.3
Q ss_pred HHHHhccCcCCCCEEEEcC--CCCHHHHHHHHHHhccCCCCc--eEEE-------EecCH--------HHHhchHHHHhh
Q 010443 196 EDILRWGVPNNIDMIALSF--VRKGSDLVNVRKVLGPHAKNI--QLMS-------KVENQ--------EGVVNFDDILRE 256 (510)
Q Consensus 196 ~di~~~a~~~g~d~I~~sf--V~sa~dv~~vr~~l~~~~~~~--~Iia-------kIEt~--------~av~nldeI~~~ 256 (510)
+++ +.+++.|+|+|.+.- .++++.+.++.+.++. ..+ .+=+ ++++. ..++.+..+.+.
T Consensus 87 ~~~-~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~g~--~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~ 163 (253)
T 1thf_D 87 ETA-SELILRGADKVSINTAAVENPSLITQIAQTFGS--QAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKR 163 (253)
T ss_dssp HHH-HHHHHTTCSEEEESHHHHHCTHHHHHHHHHHCG--GGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHT
T ss_pred HHH-HHHHHcCCCEEEEChHHHhChHHHHHHHHHcCC--CcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHC
Confidence 345 455678999998864 2344445555554431 111 1111 12221 123344555555
Q ss_pred -cCeeEEe-CCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccC
Q 010443 257 -TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGE 334 (510)
Q Consensus 257 -~DgI~Ig-rgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~E 334 (510)
+|.|++- +.-=+...++ .+. .-+++ +...+.|++... ..-+.+ |+..+...|+|+++...-
T Consensus 164 G~~~i~~~~~~~~g~~~g~-~~~-~~~~l---~~~~~ipvia~G---------GI~~~~---d~~~~~~~Gadgv~vGsa 226 (253)
T 1thf_D 164 GAGEILLTSIDRDGTKSGY-DTE-MIRFV---RPLTTLPIIASG---------GAGKME---HFLEAFLAGADAALAASV 226 (253)
T ss_dssp TCSEEEEEETTTTTSCSCC-CHH-HHHHH---GGGCCSCEEEES---------CCCSHH---HHHHHHHTTCSEEEESHH
T ss_pred CCCEEEEEeccCCCCCCCC-CHH-HHHHH---HHhcCCCEEEEC---------CCCCHH---HHHHHHHcCChHHHHHHH
Confidence 6888874 1111111222 111 11222 234588988743 344444 444555679999998643
Q ss_pred CCCCC-CHHHHHHHH
Q 010443 335 SAAGA-YPEIAVKIM 348 (510)
Q Consensus 335 ta~G~-yP~~~V~~m 348 (510)
-..+. -|.++++.+
T Consensus 227 l~~~~~~~~~~~~~l 241 (253)
T 1thf_D 227 FHFREIDVRELKEYL 241 (253)
T ss_dssp HHTTCSCHHHHHHHH
T ss_pred HHcCCCCHHHHHHHH
Confidence 33343 455666654
No 122
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=69.97 E-value=25 Score=32.21 Aligned_cols=126 Identities=7% Similarity=-0.001 Sum_probs=65.8
Q ss_pred HHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhH
Q 010443 197 DILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKI 276 (510)
Q Consensus 197 di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v 276 (510)
++ +.+++.|+|+|.++. ...+ +.+.+ ++.| ..++.-+.|++-+.. ....-+|.|.+-+++ ..+++.+
T Consensus 72 ~i-~~a~~~Gad~V~~~~-~~~~-~~~~~---~~~g--~~~~~g~~t~~e~~~--a~~~G~d~v~v~~t~---~~g~~~~ 138 (212)
T 2v82_A 72 QV-DALARMGCQLIVTPN-IHSE-VIRRA---VGYG--MTVCPGCATATEAFT--ALEAGAQALKIFPSS---AFGPQYI 138 (212)
T ss_dssp HH-HHHHHTTCCEEECSS-CCHH-HHHHH---HHTT--CEEECEECSHHHHHH--HHHTTCSEEEETTHH---HHCHHHH
T ss_pred HH-HHHHHcCCCEEEeCC-CCHH-HHHHH---HHcC--CCEEeecCCHHHHHH--HHHCCCCEEEEecCC---CCCHHHH
Confidence 45 567889999998664 2233 32222 2233 233333555443321 122236988874432 1222222
Q ss_pred HHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCC----CCHHHHHHHHHH
Q 010443 277 FLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAG----AYPEIAVKIMRR 350 (510)
Q Consensus 277 ~~~qk~ii~~~~~~--gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G----~yP~~~V~~m~~ 350 (510)
. +.++.. +.|++...-+ +. .++..+...|+|++....--..+ ..|.+.++.+.+
T Consensus 139 ~-------~l~~~~~~~ipvia~GGI----------~~---~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~~l~~ 198 (212)
T 2v82_A 139 K-------ALKAVLPSDIAVFAVGGV----------TP---ENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVK 198 (212)
T ss_dssp H-------HHHTTSCTTCEEEEESSC----------CT---TTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHHHHHH
T ss_pred H-------HHHHhccCCCeEEEeCCC----------CH---HHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHHHHHH
Confidence 2 222233 3787765432 21 34566667899999986443333 357777777766
Q ss_pred HHHHH
Q 010443 351 ICIEA 355 (510)
Q Consensus 351 i~~~a 355 (510)
.++++
T Consensus 199 ~~~~~ 203 (212)
T 2v82_A 199 AYREA 203 (212)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 123
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=69.90 E-value=45 Score=31.57 Aligned_cols=127 Identities=9% Similarity=0.039 Sum_probs=71.5
Q ss_pred cHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEe-------cC----HHHHhchHHHHhh-----c
Q 010443 194 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV-------EN----QEGVVNFDDILRE-----T 257 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakI-------Et----~~av~nldeI~~~-----~ 257 (510)
+.++..+++.+.|+|+|=+....-.+++.++++.+++.|-.+..+.-- .. .++++.+...++. +
T Consensus 39 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa 118 (287)
T 3kws_A 39 SLNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGS 118 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 444433788899999999998877889999999998876443322210 01 2344455544443 3
Q ss_pred CeeEEeCCcccC--CC-----CchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHH
Q 010443 258 DSFMVARGDLGM--EI-----PVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAV 322 (510)
Q Consensus 258 DgI~IgrgDLg~--e~-----~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av 322 (510)
+.|.+..|.-.. .. .++.+...-+++...|.++|..+.+=+ +..+..+...|-.++.++...+
T Consensus 119 ~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~--~~~~~~~~~~~~~~~~~ll~~v 188 (287)
T 3kws_A 119 TGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEP--LNRKECFYLRQVADAASLCRDI 188 (287)
T ss_dssp SEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECC--CCTTTCSSCCCHHHHHHHHHHH
T ss_pred CEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe--cCcccCcccCCHHHHHHHHHHc
Confidence 566665442111 11 123455555677777888887766421 1111122344555555555554
No 124
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=69.72 E-value=41 Score=31.84 Aligned_cols=113 Identities=7% Similarity=0.003 Sum_probs=71.9
Q ss_pred CChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEE--EecCH-------HHHhchHHHHhh-cCe
Q 010443 190 LTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMS--KVENQ-------EGVVNFDDILRE-TDS 259 (510)
Q Consensus 190 lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~Iia--kIEt~-------~av~nldeI~~~-~Dg 259 (510)
-++.+...+.+...+.|+.+|.+ .+.++++++|+.. +++|+. |.+-. .-++.+++..+. +|.
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~ 104 (232)
T 3igs_A 33 DKPEIVAAMALAAEQAGAVAVRI---EGIDNLRMTRSLV-----SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAI 104 (232)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSE
T ss_pred CCcchHHHHHHHHHHCCCeEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCE
Confidence 35667777756677789999886 5889999998765 345564 22100 113345555555 799
Q ss_pred eEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEe
Q 010443 260 FMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 331 (510)
Q Consensus 260 I~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imL 331 (510)
|.++-..+. .. ...+++++.++++|.++++-. .|..| ...+...|+|.+..
T Consensus 105 V~l~~~~~~---~p----~~l~~~i~~~~~~g~~v~~~v-----------~t~ee---a~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 105 IAVDGTARQ---RP----VAVEALLARIHHHHLLTMADC-----------SSVDD---GLACQRLGADIIGT 155 (232)
T ss_dssp EEEECCSSC---CS----SCHHHHHHHHHHTTCEEEEEC-----------CSHHH---HHHHHHTTCSEEEC
T ss_pred EEECccccC---CH----HHHHHHHHHHHHCCCEEEEeC-----------CCHHH---HHHHHhCCCCEEEE
Confidence 988643221 11 234667788888999988642 34444 35677889999963
No 125
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=69.72 E-value=27 Score=33.11 Aligned_cols=38 Identities=24% Similarity=0.163 Sum_probs=28.1
Q ss_pred HHHHHHHHHcCC------CeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 281 KMMIYKCNLVGK------PVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 281 k~ii~~~~~~gk------pvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
.++++.|+++|. |++ |--+-.+++..|...|+|.+-+.
T Consensus 96 ~evi~~~~~~~v~~~~~~~~~--------------PG~~TptE~~~A~~~Gad~vK~F 139 (217)
T 3lab_A 96 PELIEKAKQVKLDGQWQGVFL--------------PGVATASEVMIAAQAGITQLKCF 139 (217)
T ss_dssp HHHHHHHHHHHHHCSCCCEEE--------------EEECSHHHHHHHHHTTCCEEEET
T ss_pred HHHHHHHHHcCCCccCCCeEe--------------CCCCCHHHHHHHHHcCCCEEEEC
Confidence 578899999999 864 11122456688999999999764
No 126
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=69.67 E-value=20 Score=34.83 Aligned_cols=127 Identities=17% Similarity=0.154 Sum_probs=67.1
Q ss_pred hhcHHHHHhccCc-CCCCEEEEcCC------------CCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh--
Q 010443 192 EKDKEDILRWGVP-NNIDMIALSFV------------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-- 256 (510)
Q Consensus 192 ~~D~~di~~~a~~-~g~d~I~~sfV------------~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-- 256 (510)
..+.....+.+.+ .|+|+|-+.|- .+.+.+.++-+.+++. -+..++.|+=- ++.++.++++.
T Consensus 110 ~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~-~~~pv~vk~~~--~~~~~~~~a~~l~ 186 (311)
T 1ep3_A 110 EADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV-SKVPLYVKLSP--NVTDIVPIAKAVE 186 (311)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH-CSSCEEEEECS--CSSCSHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh-cCCCEEEEECC--ChHHHHHHHHHHH
Confidence 3444444355555 89999977543 2334444444434322 14678888741 22344444332
Q ss_pred ---cCeeEEeCCcccC-----------------CCCchhHHHHHHHHHHHH-HHcCCCeEEehhhhHhhhcCCCCChHhH
Q 010443 257 ---TDSFMVARGDLGM-----------------EIPVEKIFLAQKMMIYKC-NLVGKPVVTATQMLESMIKSPRPTRAEA 315 (510)
Q Consensus 257 ---~DgI~IgrgDLg~-----------------e~~~~~v~~~qk~ii~~~-~~~gkpvivaTqmLeSM~~~~~PtraEv 315 (510)
+|+|.+.-+..|. -.+....+.. -..+... +....|+|.+.-+- + .
T Consensus 187 ~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~-~~~i~~i~~~~~ipvia~GGI~---------~---~ 253 (311)
T 1ep3_A 187 AAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVA-LKLIHQVAQDVDIPIIGMGGVA---------N---A 253 (311)
T ss_dssp HTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHH-HHHHHHHHTTCSSCEEECSSCC---------S---H
T ss_pred HcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHH-HHHHHHHHHhcCCCEEEECCcC---------C---H
Confidence 6999983211110 0122222222 2333333 34589988754432 2 3
Q ss_pred HHHHHHHHcCCceEEeccC
Q 010443 316 TDVANAVLDGTDCVMLSGE 334 (510)
Q Consensus 316 ~Dv~~av~~G~D~imLs~E 334 (510)
.|+..++..|+|++++..-
T Consensus 254 ~d~~~~l~~GAd~V~vg~~ 272 (311)
T 1ep3_A 254 QDVLEMYMAGASAVAVGTA 272 (311)
T ss_dssp HHHHHHHHHTCSEEEECTH
T ss_pred HHHHHHHHcCCCEEEECHH
Confidence 4677788889999999643
No 127
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=68.98 E-value=24 Score=33.07 Aligned_cols=132 Identities=13% Similarity=0.131 Sum_probs=67.3
Q ss_pred HHHhccCcCCCCEEEEcC--CCCHHHHHHHHHHhccCCCCceEEE---------EecCH--------HHHhchHHHHhh-
Q 010443 197 DILRWGVPNNIDMIALSF--VRKGSDLVNVRKVLGPHAKNIQLMS---------KVENQ--------EGVVNFDDILRE- 256 (510)
Q Consensus 197 di~~~a~~~g~d~I~~sf--V~sa~dv~~vr~~l~~~~~~~~Iia---------kIEt~--------~av~nldeI~~~- 256 (510)
++ +.+++.|+|+|.+.- .++++.+.++.+.+.. ..+.+-. ++++. ..++.+..+.+.
T Consensus 89 ~~-~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~~~--~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G 165 (252)
T 1ka9_F 89 DA-RKLLLSGADKVSVNSAAVRRPELIRELADHFGA--QAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELG 165 (252)
T ss_dssp HH-HHHHHHTCSEEEECHHHHHCTHHHHHHHHHHCG--GGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHT
T ss_pred HH-HHHHHcCCCEEEEChHHHhCcHHHHHHHHHcCC--CcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcC
Confidence 45 445667899988864 4455556666655531 1111111 12221 123444555555
Q ss_pred cCeeEEe-CCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCC
Q 010443 257 TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGES 335 (510)
Q Consensus 257 ~DgI~Ig-rgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Et 335 (510)
++++++. ++-=|...+. ++ ..+-+.++..+.|++... ..-+.+ |+..+...|+|++|...--
T Consensus 166 ~~~i~~~~~~~~g~~~g~-~~----~~i~~l~~~~~ipvia~G---------GI~~~~---d~~~~~~~Gadgv~vgsal 228 (252)
T 1ka9_F 166 AGEILLTSMDRDGTKEGY-DL----RLTRMVAEAVGVPVIASG---------GAGRME---HFLEAFQAGAEAALAASVF 228 (252)
T ss_dssp CCEEEEEETTTTTTCSCC-CH----HHHHHHHHHCSSCEEEES---------CCCSHH---HHHHHHHTTCSEEEESHHH
T ss_pred CCEEEEecccCCCCcCCC-CH----HHHHHHHHHcCCCEEEeC---------CCCCHH---HHHHHHHCCCHHHHHHHHH
Confidence 7888875 2111222222 21 112222344589998743 344444 4455555799999987544
Q ss_pred CCCC-CHHHHHHHH
Q 010443 336 AAGA-YPEIAVKIM 348 (510)
Q Consensus 336 a~G~-yP~~~V~~m 348 (510)
..+. -|.++.+.+
T Consensus 229 ~~~~~~~~~~~~~l 242 (252)
T 1ka9_F 229 HFGEIPIPKLKRYL 242 (252)
T ss_dssp HTTSSCHHHHHHHH
T ss_pred HcCCCCHHHHHHHH
Confidence 4454 455555543
No 128
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=68.44 E-value=26 Score=34.65 Aligned_cols=95 Identities=16% Similarity=0.044 Sum_probs=59.8
Q ss_pred hccCcCCCCEEEEc------CCCCHHHHHHH-HHHhccCCCCceEEEEe---cCHHHHhchHHHHhh-cCeeEEeCCccc
Q 010443 200 RWGVPNNIDMIALS------FVRKGSDLVNV-RKVLGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARGDLG 268 (510)
Q Consensus 200 ~~a~~~g~d~I~~s------fV~sa~dv~~v-r~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-~DgI~IgrgDLg 268 (510)
++.++.|+|+|++. +.-|.++=.++ +...+..+.++.+|+-+ -|.++++......+. +|++|+-+-..-
T Consensus 42 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 121 (307)
T 3s5o_A 42 HKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYY 121 (307)
T ss_dssp HHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTT
T ss_pred HHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 68899999999864 22334444444 44444556788899887 456666666555554 799998643332
Q ss_pred -CCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 269 -MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 269 -~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.....+.+...-+.| |.+.+.|+++.
T Consensus 122 ~~~~s~~~l~~~f~~i---a~a~~lPiilY 148 (307)
T 3s5o_A 122 RGRMSSAALIHHYTKV---ADLSPIPVVLY 148 (307)
T ss_dssp GGGCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCCHHHHHHHHHHH---HhhcCCCEEEE
Confidence 223445555555555 44568999875
No 129
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=67.79 E-value=70 Score=34.90 Aligned_cols=154 Identities=17% Similarity=0.212 Sum_probs=90.9
Q ss_pred cEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEeeCeEecCCCCcccCCcc--------------cc-
Q 010443 122 EMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVV--------------VD- 186 (510)
Q Consensus 122 ~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~i~~~v~~~G~l~s~K~vnlp~~~--------------~~- 186 (510)
+.|++|.-.+--.|. .+-++++.+.++|+ .+..+. .+-|.--++..+++|..- ++
T Consensus 140 ~~ilidDG~i~l~V~---~~~~~~~~v~~~V~----~gG~L~---~~KgvNlPg~~~~lp~ltekD~~dl~f~~~~~vD~ 209 (606)
T 3t05_A 140 SYILLDDGLIELQVK---DIDHAKKEVKCDIL----NSGELK---NKKGVNLPGVRVSLPGITEKDAEDIRFGIKENVDF 209 (606)
T ss_dssp CEEEETTTTEEEEEE---EEETTTTEEEEEEC----SCCEEE---TTCBEECSSSCCCCCSSCHHHHHHHHHHHHTTCSE
T ss_pred CEEEEeCCeEEEEEE---EEEecCCEEEEEEE----ECeEEe---CCceEECCCCccCCCCCChhHHHHHHHHHHcCCCE
Confidence 457776544322220 01234566777764 233332 344666677778887632 11
Q ss_pred --CC-CCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccC------------------------------C-
Q 010443 187 --LP-TLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPH------------------------------A- 232 (510)
Q Consensus 187 --lp-~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~------------------------------~- 232 (510)
++ .=+..|...++++..+.|.+.-+++++++++-++.+.+++... +
T Consensus 210 Ia~SFVr~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~ 289 (606)
T 3t05_A 210 IAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNK 289 (606)
T ss_dssp EEETTCCSHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHhCCEEEEccccccCcCCHHHHHHHHHHHHHHHHH
Confidence 11 1267888888656556777889999999999999987766321 0
Q ss_pred -CCceEEE------EecCH-----HHHhchHHHHhhcCeeEEe----CCcccCCCCchhHHHHHHHHHHHHHHc
Q 010443 233 -KNIQLMS------KVENQ-----EGVVNFDDILRETDSFMVA----RGDLGMEIPVEKIFLAQKMMIYKCNLV 290 (510)
Q Consensus 233 -~~~~Iia------kIEt~-----~av~nldeI~~~~DgI~Ig----rgDLg~e~~~~~v~~~qk~ii~~~~~~ 290 (510)
..+.|+| +|+++ |.-+=..+|+.-+|++|+. .|++ |. +....+.+|+..+.++
T Consensus 290 ~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLSgETA~G~y----Pv-eaV~~m~~I~~~aE~~ 358 (606)
T 3t05_A 290 LGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLY----PE-EAVKTMRNIAVSAEAA 358 (606)
T ss_dssp HTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEECHHHHSCSC----SH-HHHHHHHHHHHHHHHT
T ss_pred cCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEecccccCCCC----HH-HHHHHHHHHHHHHHhh
Confidence 1233443 55553 4445567777779999997 4543 33 3344566676666654
No 130
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=67.64 E-value=22 Score=34.90 Aligned_cols=96 Identities=11% Similarity=0.098 Sum_probs=60.2
Q ss_pred HHhccCcCCCCEEEEc------CCCCHHHHHHH-HHHhccCCCCceEEEEe---cCHHHHhchHHHHhh-cCeeEEeCCc
Q 010443 198 ILRWGVPNNIDMIALS------FVRKGSDLVNV-RKVLGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARGD 266 (510)
Q Consensus 198 i~~~a~~~g~d~I~~s------fV~sa~dv~~v-r~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-~DgI~IgrgD 266 (510)
+.++.++.|+|+|++. +.=|.++=.++ +..++..+.++.+|+-+ -|.++++......+. +||+|+-+-.
T Consensus 28 lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 107 (292)
T 3daq_A 28 HVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPY 107 (292)
T ss_dssp HHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 3368889999999874 22233443333 33334445678899988 466777666665554 7999998654
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 267 LGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 267 Lg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
+.- .+.+.+...-+.|.++ .+.|+++.
T Consensus 108 y~~-~~~~~l~~~f~~ia~a---~~lPiilY 134 (292)
T 3daq_A 108 YNK-TNQRGLVKHFEAIADA---VKLPVVLY 134 (292)
T ss_dssp SSC-CCHHHHHHHHHHHHHH---HCSCEEEE
T ss_pred CCC-CCHHHHHHHHHHHHHh---CCCCEEEE
Confidence 432 2345555555566554 48999875
No 131
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=67.36 E-value=8.4 Score=40.93 Aligned_cols=52 Identities=19% Similarity=0.274 Sum_probs=42.1
Q ss_pred CCeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 010443 20 PKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAA 71 (510)
Q Consensus 20 ~~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~ 71 (510)
.+-.+.+.+|......+.++.++++|++++=||++||......+.++.+|+.
T Consensus 242 ~rl~vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~ 293 (514)
T 1jcn_A 242 KQLLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK 293 (514)
T ss_dssp SCBCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred CceeeeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh
Confidence 3455667778777778999999999999999999999887766777777764
No 132
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=67.23 E-value=15 Score=36.50 Aligned_cols=97 Identities=12% Similarity=0.164 Sum_probs=59.8
Q ss_pred HHhccCcCCCCEEEEc------CCCCHHHHHHH-HHHhccCCCCceEEEEe---cCHHHHhchHHHHhh-cCeeEEeCCc
Q 010443 198 ILRWGVPNNIDMIALS------FVRKGSDLVNV-RKVLGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARGD 266 (510)
Q Consensus 198 i~~~a~~~g~d~I~~s------fV~sa~dv~~v-r~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-~DgI~IgrgD 266 (510)
+.++.++.|+|+|++. +.=|.++=.++ +..++..+.++.+|+-+ -|.++++....-.+. +||+++-+-.
T Consensus 34 lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Py 113 (309)
T 3fkr_A 34 AVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPY 113 (309)
T ss_dssp HHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred HHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 3368889999999873 22233333333 33344445678899887 366677666655554 7999998655
Q ss_pred cc--CCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 267 LG--MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 267 Lg--~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.. ...+.+.+...-+.| |.+.+.|+++.
T Consensus 114 y~~~~~~s~~~l~~~f~~v---a~a~~lPiilY 143 (309)
T 3fkr_A 114 HGATFRVPEAQIFEFYARV---SDAIAIPIMVQ 143 (309)
T ss_dssp BTTTBCCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CccCCCCCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 43 233445555555555 44558998875
No 133
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=67.06 E-value=22 Score=34.11 Aligned_cols=122 Identities=14% Similarity=0.167 Sum_probs=71.1
Q ss_pred cCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHh----hcCeeEEeCC---ccc---CCC
Q 010443 202 GVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR----ETDSFMVARG---DLG---MEI 271 (510)
Q Consensus 202 a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~----~~DgI~Igrg---DLg---~e~ 271 (510)
|.+.|+|+|-++-- .-.+..+|+++.. +..|-+-+-| .+|+.+ -+|.|.+++- +.. ..+
T Consensus 108 A~~~gAdGVHLg~~--dl~~~~~r~~~~~---~~~iG~S~ht------~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~ 176 (243)
T 3o63_A 108 ARAAGADVLHLGQR--DLPVNVARQILAP---DTLIGRSTHD------PDQVAAAAAGDADYFCVGPCWPTPTKPGRAAP 176 (243)
T ss_dssp HHHHTCSEEEECTT--SSCHHHHHHHSCT---TCEEEEEECS------HHHHHHHHHSSCSEEEECCSSCCCC-----CC
T ss_pred HHHhCCCEEEecCC--cCCHHHHHHhhCC---CCEEEEeCCC------HHHHHHHhhCCCCEEEEcCccCCCCCCCcchh
Confidence 45679999998843 3345667776642 3334333433 444333 3799999862 111 123
Q ss_pred CchhHHHHHHHHHHHHHH--cCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHH
Q 010443 272 PVEKIFLAQKMMIYKCNL--VGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMR 349 (510)
Q Consensus 272 ~~~~v~~~qk~ii~~~~~--~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~ 349 (510)
+++.+..+ +.. ..+|++...- + |.. ++..+...|+|++.+.+.-..-..|.++++.+.
T Consensus 177 gl~~l~~~-------~~~~~~~iPvvAiGG---------I-~~~---ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l~ 236 (243)
T 3o63_A 177 GLGLVRVA-------AELGGDDKPWFAIGG---------I-NAQ---RLPAVLDAGARRIVVVRAITSADDPRAAAEQLR 236 (243)
T ss_dssp CHHHHHHH-------HTC---CCCEEEESS---------C-CTT---THHHHHHTTCCCEEESHHHHTCSSHHHHHHHHH
T ss_pred hHHHHHHH-------HHhccCCCCEEEecC---------C-CHH---HHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHH
Confidence 33332222 222 3788876433 2 322 456667789999998766555677999999888
Q ss_pred HHHHH
Q 010443 350 RICIE 354 (510)
Q Consensus 350 ~i~~~ 354 (510)
+.+.+
T Consensus 237 ~~~~~ 241 (243)
T 3o63_A 237 SALTA 241 (243)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 76543
No 134
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=66.81 E-value=20 Score=34.69 Aligned_cols=114 Identities=10% Similarity=0.061 Sum_probs=72.5
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeE--EeC-CcccCCCCchhH
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFM--VAR-GDLGMEIPVEKI 276 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~--Igr-gDLg~e~~~~~v 276 (510)
+.+.+.|+|++++|-. -.|+..++++.+++.|-+ .|-.+=-....+.+..|++.++|.+ +.+ |==|.. ..+
T Consensus 110 ~~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~Gl~--~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~---~~~ 183 (252)
T 3tha_A 110 KKAKSLGICALIVPEL-SFEESDDLIKECERYNIA--LITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTK---SVE 183 (252)
T ss_dssp HHHHHTTEEEEECTTC-CGGGCHHHHHHHHHTTCE--ECEEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCS---HHH
T ss_pred HHHHHcCCCEEEeCCC-CHHHHHHHHHHHHHcCCe--EEEEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCcc---cCC
Confidence 5667899999999987 556788888888876633 3333322223588999999988773 332 212222 234
Q ss_pred HHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 277 FLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 277 ~~~qk~ii~~~~~~-gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
..-.+..++..+++ ++|+++..- .=|++.+. .+..++|++...
T Consensus 184 ~~~~~~~v~~vr~~~~~Pv~vGfG---------Ist~e~a~----~~~~~ADGVIVG 227 (252)
T 3tha_A 184 EAILQDKVKEIRSFTNLPIFVGFG---------IQNNQDVK----RMRKVADGVIVG 227 (252)
T ss_dssp HHHHHHHHHHHHTTCCSCEEEESS---------CCSHHHHH----HHTTTSSEEEEC
T ss_pred CHHHHHHHHHHHHhcCCcEEEEcC---------cCCHHHHH----HHHhcCCEEEEC
Confidence 44456677777765 679987543 33444333 334579999885
No 135
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=66.21 E-value=49 Score=34.71 Aligned_cols=119 Identities=17% Similarity=0.209 Sum_probs=70.9
Q ss_pred HHHHHhccCcCCCCEEEEcCC--CCHHHHHHHHHHhccCCCCceEEE-EecCHHHHhchHHHHhhcCeeEEeCCcccCC-
Q 010443 195 KEDILRWGVPNNIDMIALSFV--RKGSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRETDSFMVARGDLGME- 270 (510)
Q Consensus 195 ~~di~~~a~~~g~d~I~~sfV--~sa~dv~~vr~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~~DgI~IgrgDLg~e- 270 (510)
.+.+ .+..+.|+|.+.+.-. .+..-+..++.+-... ++.+++ .+-|+++...+. -+|+|.+|.|-=+..
T Consensus 230 ~~~a-~~l~~~gvd~lvvdta~G~~~~~L~~I~~l~~~~--~vpvi~k~v~~~~~a~~l~----G~d~v~vg~g~g~~~~ 302 (486)
T 2cu0_A 230 IKRA-IELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQKV--DADFIVGNIANPKAVDDLT----FADAVKVGIGPGSICT 302 (486)
T ss_dssp HHHH-HHHHHTTCSEEEEECSCCCCHHHHHHHHHHHHTC--CSEEEEEEECCHHHHTTCT----TSSEEEECSSCSTTBC
T ss_pred HHHH-HHHHHhcCCceEEEecCCcEeehhhHHHHHHHHh--CCccccCCcCCHHHHHHhh----CCCeEEEeeeecccee
Confidence 4445 5677899998877532 2333344443332221 456666 477888776655 689999964432111
Q ss_pred ------CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 271 ------IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 271 ------~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
.|.+.+ ..-..+.+.+.+.+.|+|.+.-+. --.|++.|+..|||++|+..
T Consensus 303 ~r~~~~~g~~~~-~~l~~~~~~~~~~~vpVia~GGi~------------~~~di~kalalGA~~v~~g~ 358 (486)
T 2cu0_A 303 TRIVAGVGVPQI-TAVAMVADRAQEYGLYVIADGGIR------------YSGDIVKAIAAGADAVMLGN 358 (486)
T ss_dssp HHHHTCCCCCHH-HHHHHHHHHHHHHTCEEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred eeEEeecCcchH-HHHHHHHHHHHHcCCcEEecCCCC------------CHHHHHHHHHcCCCceeeCh
Confidence 111111 223334445566689998765433 24688999999999999964
No 136
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=65.56 E-value=55 Score=33.17 Aligned_cols=90 Identities=13% Similarity=0.192 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 218 GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 218 a~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.+.++.++++..+. .+.+++-+-.++.++-+.+. .|.+-||.+++- +..+++++.+.||||++.
T Consensus 156 ~egl~~l~~~~~e~--Gl~~~te~~d~~~~~~l~~~---vd~lkIgAr~~~-----------n~~LL~~va~~~kPVilk 219 (350)
T 1vr6_A 156 EKGLEYLREAADKY--GMYVVTEALGEDDLPKVAEY---ADIIQIGARNAQ-----------NFRLLSKAGSYNKPVLLK 219 (350)
T ss_dssp HHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHHH---CSEEEECGGGTT-----------CHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHHHHc--CCcEEEEeCCHHHHHHHHHh---CCEEEECccccc-----------CHHHHHHHHccCCcEEEc
Confidence 47788888887664 58888888888777666554 799999976652 123445555789999997
Q ss_pred hhhhHhhhcCCCCChHhHHHHHHHHH-cCCceEEe
Q 010443 298 TQMLESMIKSPRPTRAEATDVANAVL-DGTDCVML 331 (510)
Q Consensus 298 TqmLeSM~~~~~PtraEv~Dv~~av~-~G~D~imL 331 (510)
|.|- .|-.|+...++++. .|.+-++|
T Consensus 220 ~G~~--------~tl~ei~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 220 RGFM--------NTIEEFLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp CCTT--------CCHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCC--------CCHHHHHHHHHHHHHCCCCeEEE
Confidence 6543 57788888888664 57655555
No 137
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=65.32 E-value=34 Score=33.51 Aligned_cols=98 Identities=8% Similarity=0.096 Sum_probs=62.0
Q ss_pred HHHhccCcCCCCEEEEc------CCCCHHHHHHHHH-HhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCC
Q 010443 197 DILRWGVPNNIDMIALS------FVRKGSDLVNVRK-VLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARG 265 (510)
Q Consensus 197 di~~~a~~~g~d~I~~s------fV~sa~dv~~vr~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~Igrg 265 (510)
.+.++.++.|+|+|++. +.-|.++=.++-+ ..+..+.++.+|+-+= |.++++....-.+. +||+|+-+-
T Consensus 28 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 107 (294)
T 3b4u_A 28 AHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPP 107 (294)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 33378889999999873 3344444444444 4444456788999884 47777766665554 799999865
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHc---CCCeEEe
Q 010443 266 DLGMEIPVEKIFLAQKMMIYKCNLV---GKPVVTA 297 (510)
Q Consensus 266 DLg~e~~~~~v~~~qk~ii~~~~~~---gkpviva 297 (510)
.+.-..+.+.+...-+.| |.+. +.|+++.
T Consensus 108 ~y~~~~s~~~l~~~f~~v---a~a~p~~~lPiilY 139 (294)
T 3b4u_A 108 SYFKNVSDDGLFAWFSAV---FSKIGKDARDILVY 139 (294)
T ss_dssp CSSCSCCHHHHHHHHHHH---HHHHCTTCCCEEEE
T ss_pred cCCCCCCHHHHHHHHHHH---HHhcCCCCCcEEEE
Confidence 543312445555555555 4455 7999874
No 138
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=65.21 E-value=11 Score=35.10 Aligned_cols=134 Identities=11% Similarity=-0.024 Sum_probs=72.1
Q ss_pred cCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCce--EE-EEecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHH
Q 010443 202 GVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQ--LM-SKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFL 278 (510)
Q Consensus 202 a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~--Ii-akIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~ 278 (510)
+.+.|+|+|.+..--..+.++.+.+.+++.|.... ++ +- |....+.+.++ . .+-+.+.++-++++.|....+.
T Consensus 76 ~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~~~ll~~~--t~~~~~~l~~~-~-~~~~vl~~a~~~~~~G~~g~~~ 151 (216)
T 1q6o_A 76 CFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYW--TWEQAQQWRDA-G-IGQVVYHRSRDAQAAGVAWGEA 151 (216)
T ss_dssp HHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCC--CHHHHHHHHHT-T-CCEEEEECCHHHHHTTCCCCHH
T ss_pred HHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCceeeeeeCC--ChhhHHHHHhc-C-cHHHHHHHHHHHHhcCCCCCHH
Confidence 35689999998876666668888888877654422 22 11 12233444433 1 3445554444444444322111
Q ss_pred HHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHH
Q 010443 279 AQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 353 (510)
Q Consensus 279 ~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 353 (510)
--+.+-+.+ ..+.|+++.--+ .|.. +..++..|+|.+....--.....|.++++.+++.++
T Consensus 152 ~i~~lr~~~-~~~~~i~v~GGI--------~~~~-----~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i~ 212 (216)
T 1q6o_A 152 DITAIKRLS-DMGFKVTVTGGL--------ALED-----LPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIA 212 (216)
T ss_dssp HHHHHHHHH-HTTCEEEEESSC--------CGGG-----GGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCCCcEEEECCc--------Chhh-----HHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHHH
Confidence 112222222 234555553221 2222 355677899999986443334469999888877554
No 139
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=65.07 E-value=23 Score=33.85 Aligned_cols=146 Identities=14% Similarity=0.075 Sum_probs=89.0
Q ss_pred CCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHH--------hhcCe
Q 010443 188 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDIL--------RETDS 259 (510)
Q Consensus 188 p~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~--------~~~Dg 259 (510)
|..|+.|.+.+.+-+.+.|+..|+++ +..+..++ .+. +.+++|.+=|=-|.|-...+.-+ .-+|.
T Consensus 24 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~-~l~--~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAdE 96 (231)
T 3ndo_A 24 PEATPSDVTALVDEAADLGVFAVCVS----PPLVSVAA-GVA--PSGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATE 96 (231)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHH-HHC--CTTCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCcEEEEC----HHHHHHHH-Hhc--CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 67788888877678889999999985 55777777 674 34677777775555543332222 11343
Q ss_pred eEEeCCcccCCCCc------hhHHHHHHHHHHHHHHcCCC--eEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEE
Q 010443 260 FMVARGDLGMEIPV------EKIFLAQKMMIYKCNLVGKP--VVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVM 330 (510)
Q Consensus 260 I~IgrgDLg~e~~~------~~v~~~qk~ii~~~~~~gkp--vivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~im 330 (510)
|=+ -+.++. +.+..-.+.+.++|. |+| ||+-|-.|+. ..|..|+..... +...|+|.|=
T Consensus 97 IDm-----Vinig~lk~g~~~~v~~ei~~v~~a~~--~~~lKvIiEt~~L~~-----~~t~eei~~a~~ia~~aGADfVK 164 (231)
T 3ndo_A 97 IDM-----VIDVGAALAGDLDAVSADITAVRKAVR--AATLKVIVESAALLE-----FSGEPLLADVCRVARDAGADFVK 164 (231)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTT--TSEEEEECCHHHHHH-----HTCHHHHHHHHHHHHHTTCSEEE
T ss_pred EEE-----EeehHhhhcccHHHHHHHHHHHHHHcc--CCceEEEEECcccCC-----CCCHHHHHHHHHHHHHHCcCEEE
Confidence 321 122222 234444445555664 444 5777776632 247888877777 6678999986
Q ss_pred eccCCC-CCCCHHHHHHHHHHHH
Q 010443 331 LSGESA-AGAYPEIAVKIMRRIC 352 (510)
Q Consensus 331 Ls~Eta-~G~yP~~~V~~m~~i~ 352 (510)
-|.==. .|.--++.|+.|++.+
T Consensus 165 TSTGf~~~~gAt~edv~lm~~~v 187 (231)
T 3ndo_A 165 TSTGFHPSGGASVQAVEIMARTV 187 (231)
T ss_dssp CCCSCCTTCSCCHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHh
Confidence 552111 2223468899998875
No 140
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=64.82 E-value=28 Score=35.33 Aligned_cols=99 Identities=13% Similarity=0.307 Sum_probs=68.0
Q ss_pred CHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010443 217 KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 296 (510)
Q Consensus 217 sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviv 296 (510)
+.++.+.++++.++. .+.+++-+=..++++-+++. -.|.+=||-+|+.- ++ +++++.+.|||+|+
T Consensus 89 ~~e~~~~L~~~~~~~--Gi~~~st~~d~~svd~l~~~--~v~~~KI~S~~~~n------~~-----LL~~va~~gkPviL 153 (349)
T 2wqp_A 89 NEEDEIKLKEYVESK--GMIFISTLFSRAAALRLQRM--DIPAYKIGSGECNN------YP-----LIKLVASFGKPIIL 153 (349)
T ss_dssp CHHHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHH--TCSCEEECGGGTTC------HH-----HHHHHHTTCSCEEE
T ss_pred CHHHHHHHHHHHHHh--CCeEEEeeCCHHHHHHHHhc--CCCEEEECcccccC------HH-----HHHHHHhcCCeEEE
Confidence 346667777777664 47777777777777655542 16999999887742 22 35566778999999
Q ss_pred ehhhhHhhhcCCCCChHhHHHHHHHHH-cCCceEEeccCCCCCCCHH
Q 010443 297 ATQMLESMIKSPRPTRAEATDVANAVL-DGTDCVMLSGESAAGAYPE 342 (510)
Q Consensus 297 aTqmLeSM~~~~~PtraEv~Dv~~av~-~G~D~imLs~Eta~G~yP~ 342 (510)
.|.|- |-+|+...++++. .|.+-++|-. +-.||.
T Consensus 154 stGma---------t~~Ei~~Ave~i~~~G~~iiLlhc---~s~Yp~ 188 (349)
T 2wqp_A 154 STGMN---------SIESIKKSVEIIREAGVPYALLHC---TNIYPT 188 (349)
T ss_dssp ECTTC---------CHHHHHHHHHHHHHHTCCEEEEEC---CCCSSC
T ss_pred ECCCC---------CHHHHHHHHHHHHHcCCCEEEEec---cCCCCC
Confidence 98852 5689988888776 4677777732 334765
No 141
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=64.03 E-value=51 Score=32.15 Aligned_cols=130 Identities=12% Similarity=0.047 Sum_probs=74.1
Q ss_pred HHHhccCcCCCCEEEEcC-CCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeEEeCCcccC-CCCc
Q 010443 197 DILRWGVPNNIDMIALSF-VRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGM-EIPV 273 (510)
Q Consensus 197 di~~~a~~~g~d~I~~sf-V~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~IgrgDLg~-e~~~ 273 (510)
.+ ..+...|+|.|.+-- .-+.+++.++.++..+.| ..+++-+-|.+=++ ..++. +|.|-+..-||.. +..+
T Consensus 134 qi-~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lG--l~~lvevh~~eEl~---~A~~~ga~iIGinnr~l~t~~~dl 207 (272)
T 3tsm_A 134 QV-YEARSWGADCILIIMASVDDDLAKELEDTAFALG--MDALIEVHDEAEME---RALKLSSRLLGVNNRNLRSFEVNL 207 (272)
T ss_dssp HH-HHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTT--CEEEEEECSHHHHH---HHTTSCCSEEEEECBCTTTCCBCT
T ss_pred HH-HHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcC--CeEEEEeCCHHHHH---HHHhcCCCEEEECCCCCccCCCCh
Confidence 35 456788999977653 345677777777776654 45555554433222 11222 5777777556533 2233
Q ss_pred hhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHH
Q 010443 274 EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMR 349 (510)
Q Consensus 274 ~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~ 349 (510)
+....+.+. .. .++|++. .+..-|++ |+..+...|+|+++...---....|.++++-+.
T Consensus 208 ~~~~~L~~~----ip-~~~~vIa---------esGI~t~e---dv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l~ 266 (272)
T 3tsm_A 208 AVSERLAKM----AP-SDRLLVG---------ESGIFTHE---DCLRLEKSGIGTFLIGESLMRQHDVAAATRALL 266 (272)
T ss_dssp HHHHHHHHH----SC-TTSEEEE---------ESSCCSHH---HHHHHHTTTCCEEEECHHHHTSSCHHHHHHHHH
T ss_pred HHHHHHHHh----CC-CCCcEEE---------ECCCCCHH---HHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHHH
Confidence 332222221 11 2567664 34455655 455566689999998755555677877776654
No 142
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=63.93 E-value=11 Score=38.51 Aligned_cols=48 Identities=25% Similarity=0.383 Sum_probs=37.6
Q ss_pred EEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHH
Q 010443 23 KIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRA 70 (510)
Q Consensus 23 kIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~ 70 (510)
.+-+.+|......+.++.++++|++++-||.+||..+.+.+.|+.+|+
T Consensus 98 ~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~ 145 (366)
T 4fo4_A 98 RVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 145 (366)
T ss_dssp CCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred eEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 345556655567899999999999999999999988766666666654
No 143
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=63.59 E-value=49 Score=30.66 Aligned_cols=112 Identities=17% Similarity=0.198 Sum_probs=64.6
Q ss_pred HHHHHhccCcCCCCEEEEc-----CCCC----HHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeEEeC
Q 010443 195 KEDILRWGVPNNIDMIALS-----FVRK----GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVAR 264 (510)
Q Consensus 195 ~~di~~~a~~~g~d~I~~s-----fV~s----a~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~Igr 264 (510)
.+++ +.+.+.|+|+|-+- |+.+ .+.++++++.. +....+..++..++ +.++..+++ +|++.+.-
T Consensus 26 ~~~i-~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~---~~~~~v~l~vnd~~--~~v~~~~~~Gad~v~vh~ 99 (230)
T 1rpx_A 26 GEQV-KAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT---DLPLDVHLMIVEPD--QRVPDFIKAGADIVSVHC 99 (230)
T ss_dssp HHHH-HHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC---CSCEEEEEESSSHH--HHHHHHHHTTCSEEEEEC
T ss_pred HHHH-HHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc---CCcEEEEEEecCHH--HHHHHHHHcCCCEEEEEe
Confidence 3455 67778899988773 5443 45555555443 23445666777643 345555554 79998863
Q ss_pred CcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 265 GDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 265 gDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
.... .+.. ...++.++++|+.++++.. |. |..|. ..++..++|.+++.
T Consensus 100 ~~~~----~~~~----~~~~~~~~~~g~~ig~~~~--------p~-t~~e~---~~~~~~~~d~vl~~ 147 (230)
T 1rpx_A 100 EQSS----TIHL----HRTINQIKSLGAKAGVVLN--------PG-TPLTA---IEYVLDAVDLVLIM 147 (230)
T ss_dssp STTT----CSCH----HHHHHHHHHTTSEEEEEEC--------TT-CCGGG---GTTTTTTCSEEEEE
T ss_pred cCcc----chhH----HHHHHHHHHcCCcEEEEeC--------CC-CCHHH---HHHHHhhCCEEEEE
Confidence 2001 1221 3567777888998888631 11 11221 23445789988553
No 144
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=63.50 E-value=10 Score=37.62 Aligned_cols=154 Identities=18% Similarity=0.148 Sum_probs=83.0
Q ss_pred HHhchHHHH----hhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHH
Q 010443 246 GVVNFDDIL----RETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANA 321 (510)
Q Consensus 246 av~nldeI~----~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~a 321 (510)
+++++++.+ ..+|++++-+|=+.. ... ...++|.|+-...=+|+.. +.+...-...+..|
T Consensus 71 gl~~~~~~i~~l~~g~dav~~~~G~~~~-------------~~~--~~~~~~lil~l~~~t~~~~-~~~~~~l~~~ve~A 134 (295)
T 3glc_A 71 GLERIDINIAPLFEHADVLMCTRGILRS-------------VVP--PATNRPVVLRASGANSILA-ELSNEAVALSMDDA 134 (295)
T ss_dssp TCTTHHHHTGGGGGGCSEEEECHHHHHH-------------HSC--GGGCCCEEEECEECCCTTS-CTTCCEECSCHHHH
T ss_pred chhhhHHHHHHhhcCCCEEEECHhHHhh-------------hcc--ccCCccEEEEEcCCCcCCC-CCccchhHHHHHHH
Confidence 455544333 347999986553321 111 1247888875443333322 22233333678889
Q ss_pred HHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcc-cchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEE
Q 010443 322 VLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESS-LDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVV 400 (510)
Q Consensus 322 v~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~-~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv 400 (510)
+..|+|++-+..=.- ..+..+.++.+.+++.+++.+ +.. .. .............+...++++|..++|+.|-+
T Consensus 135 v~~GAdaV~~~i~~G-s~~~~~~l~~i~~v~~~a~~~Glpv--Ii---e~~~G~~~~~d~e~i~~aariA~elGAD~VKt 208 (295)
T 3glc_A 135 VRLNSCAVAAQVYIG-SEYEHQSIKNIIQLVDAGMKVGMPT--MA---VTGVGKDMVRDQRYFSLATRIAAEMGAQIIKT 208 (295)
T ss_dssp HHTTCSEEEEEECTT-STTHHHHHHHHHHHHHHHHTTTCCE--EE---EECC----CCSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHCCCCEEEEEEECC-CCcHHHHHHHHHHHHHHHHHcCCEE--EE---ECCCCCccCCCHHHHHHHHHHHHHhCCCEEEe
Confidence 999999998853322 345667888888888888753 110 00 00000000011233345778999999995444
Q ss_pred EcCCchHHHHHHhhCCCCcEEEE
Q 010443 401 LTRGGTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 401 ~T~sG~tA~~iSr~RP~~PIiav 423 (510)
+.+|.+-+.+... -++||++.
T Consensus 209 -~~t~e~~~~vv~~-~~vPVv~~ 229 (295)
T 3glc_A 209 -YYVEKGFERIVAG-CPVPIVIA 229 (295)
T ss_dssp -ECCTTTHHHHHHT-CSSCEEEE
T ss_pred -CCCHHHHHHHHHh-CCCcEEEE
Confidence 4455443444332 24899988
No 145
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=63.35 E-value=20 Score=35.68 Aligned_cols=94 Identities=11% Similarity=0.147 Sum_probs=59.5
Q ss_pred hccCcCCCCEEEEc------CCCCHHHHHHHH-HHhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCCccc
Q 010443 200 RWGVPNNIDMIALS------FVRKGSDLVNVR-KVLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDLG 268 (510)
Q Consensus 200 ~~a~~~g~d~I~~s------fV~sa~dv~~vr-~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~IgrgDLg 268 (510)
++.++.|+|++++. +.=|.++=.++- ..++..+.++.||+-+= |.++++......+. +|++|+-+-.+.
T Consensus 51 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~ 130 (314)
T 3qze_A 51 DFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYN 130 (314)
T ss_dssp HHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Confidence 67789999999873 222444444433 33444456788998884 57777766666555 799999865443
Q ss_pred CCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 269 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 269 ~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
....+.+...-+.| |.+.+.|+++.
T Consensus 131 -~~s~~~l~~~f~~v---a~a~~lPiilY 155 (314)
T 3qze_A 131 -KPTQEGMYQHFRHI---AEAVAIPQILY 155 (314)
T ss_dssp -CCCHHHHHHHHHHH---HHHSCSCEEEE
T ss_pred -CCCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 22334555555555 44558999875
No 146
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=63.23 E-value=71 Score=30.56 Aligned_cols=160 Identities=13% Similarity=0.083 Sum_probs=0.0
Q ss_pred HhchHHHHhh-cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcC
Q 010443 247 VVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDG 325 (510)
Q Consensus 247 v~nldeI~~~-~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G 325 (510)
.+.++++++. +|+|+|| |..|+ ..+++..+.+++-+ ...|++. |..++ +.+..|
T Consensus 26 ~~~l~~~~~~GtDaI~vG-gs~gv--t~~~~~~~v~~ik~----~~~Piil-------~p~~~-----------~~~~~g 80 (235)
T 3w01_A 26 DDDLDAICMSQTDAIMIG-GTDDV--TEDNVIHLMSKIRR----YPLPLVL-------EISNI-----------ESVMPG 80 (235)
T ss_dssp HHHHHHHHTSSCSEEEEC-CSSCC--CHHHHHHHHHHHTT----SCSCEEE-------ECCCS-----------TTCCTT
T ss_pred HHHHHHHHHcCCCEEEEC-CcCCc--CHHHHHHHHHHhcC----cCCCEEE-------ecCCH-----------HHhhcC
Q ss_pred CceEEeccCCCCCCCHHHHHHHHHHHHHHHhc-------------ccchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHh
Q 010443 326 TDCVMLSGESAAGAYPEIAVKIMRRICIEAES-------------SLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANK 392 (510)
Q Consensus 326 ~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~-------------~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~ 392 (510)
+|++++- .--.+..|--.+.....-+++.-- .++....-.+...-.+.+ ..+.++..|.-+++-
T Consensus 81 aD~il~p-slln~~~~~~i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~--~~e~iaa~A~~a~~~ 157 (235)
T 3w01_A 81 FDFYFVP-TVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDL--TTEDLEAYAQMVNHM 157 (235)
T ss_dssp CSEEEEE-EETTBSSGGGTTHHHHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCC--CHHHHHHHHHHHHHT
T ss_pred CCEEEEc-cccCCCCcchhhhHHHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCC--CHHHHHHHHHHHHHH
Q ss_pred cCCcEEEEEcCCchH--HHHHHhhCCCC---cEEEEEecccccCCCCCCCCChhhhhhh
Q 010443 393 ARAKLIVVLTRGGTT--AKLVAKYRPAV---PILSVVVPVLTTDSFDWTCSDETPARHS 446 (510)
Q Consensus 393 ~~a~aIvv~T~sG~t--A~~iSr~RP~~---PIiav~~~~~~tt~~~~~~~~~~~aR~L 446 (510)
++-..|-+-. ||.+ ..++.+.|-.. |+++- .+.+++..|+++
T Consensus 158 ~g~~~vY~e~-sG~~g~~~~v~~ir~~~~~~pv~vG-----------fGI~~~e~a~~~ 204 (235)
T 3w01_A 158 YRLPVMYIEY-SGIYGDVSKVQAVSEHLTETQLFYG-----------GGISSEQQATEM 204 (235)
T ss_dssp TCCSEEEEEC-TTSCCCHHHHHHHHTTCSSSEEEEE-----------SCCCSHHHHHHH
T ss_pred cCCCEEEEec-CCCcCCHHHHHHHHHhcCCCCEEEE-----------CCcCCHHHHHHH
No 147
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=62.99 E-value=53 Score=35.38 Aligned_cols=233 Identities=18% Similarity=0.241 Sum_probs=129.1
Q ss_pred cEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEeeCeEecCCCCcccCCcc--------------cc-
Q 010443 122 EMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVV--------------VD- 186 (510)
Q Consensus 122 ~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~i~~~v~~~G~l~s~K~vnlp~~~--------------~~- 186 (510)
+.|++|.-.+--. .+-++++.+..+|+. +..+ -.+-|.=-++..+++|..- ++
T Consensus 191 d~IlidDG~i~l~-----V~~v~~~~v~~~V~~----gG~L---~s~KgvNlPg~~l~lpalTekD~~dl~f~~~~~vD~ 258 (550)
T 3gr4_A 191 SKIYVDDGLISLQ-----VKQKGADFLVTEVEN----GGSL---GSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDM 258 (550)
T ss_dssp CEEEETTTTEEEE-----EEEECSSEEEEEEEE----CEEE---CSSCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSE
T ss_pred CEEEEeCCEEEEE-----EEEEeCCEEEEEEEe----CcEE---cCCceeecCCCccCCCCCCHHHHHHHHHHHHcCCCE
Confidence 4577765443211 133566778888763 2222 1344566677778887531 11
Q ss_pred --CC-CCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhcc---------------------------------
Q 010443 187 --LP-TLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGP--------------------------------- 230 (510)
Q Consensus 187 --lp-~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~--------------------------------- 230 (510)
+| .=+..|...++++.-+.|.+.-+++++++++-++.+.+++..
T Consensus 259 ia~SfVr~a~Dv~~~r~~L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~ 338 (550)
T 3gr4_A 259 VFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNR 338 (550)
T ss_dssp EEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHH
T ss_pred EEecCCCCHHHHHHHHHHHHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHH
Confidence 12 125778888855555667788889999999999998877632
Q ss_pred CCCCceEEE------EecCH-----HHHhchHHHHhhcCeeEE----eCCcccCCCCchhHHHHHHHHHHHHHHcCCCeE
Q 010443 231 HAKNIQLMS------KVENQ-----EGVVNFDDILRETDSFMV----ARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVV 295 (510)
Q Consensus 231 ~~~~~~Iia------kIEt~-----~av~nldeI~~~~DgI~I----grgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvi 295 (510)
+| .+.|+| +|+++ |.-+=...|+.-+|++|+ +.|++ |. +....+.+|+..+.+.-
T Consensus 339 ag-kpVi~ATQMLeSMi~~p~PTRAEvsDVanAvldG~DavMLSgETA~G~y----Pv-eaV~~M~~I~~~aE~~~---- 408 (550)
T 3gr4_A 339 AG-KPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDY----PL-EAVRMQHLIAREAEAAI---- 408 (550)
T ss_dssp HT-CCEEEESSTTGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC----HH-HHHHHHHHHHHHHHHTS----
T ss_pred hC-CCEEEEehhhHHhhcCCCccHHHHHHHHHHHHcCCcEEEEecCccCCCC----HH-HHHHHHHHHHHHHhhcc----
Confidence 11 233443 56553 333446677777899999 55654 22 33445566666665431
Q ss_pred EehhhhHhhhc-CCC-CChHhHH---HHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHh
Q 010443 296 TATQMLESMIK-SPR-PTRAEAT---DVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIR 370 (510)
Q Consensus 296 vaTqmLeSM~~-~~~-PtraEv~---Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~ 370 (510)
...+.++.+.. .+. .+..|.. -+..|-..++.+|+.-.+| |
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~S--G-------------------------------- 454 (550)
T 3gr4_A 409 YHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKS--G-------------------------------- 454 (550)
T ss_dssp CHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHTTCSCEEEECSS--S--------------------------------
T ss_pred hhHHHHHhhhhccCCCCChHHHHHHHHHHHHHhcCCCEEEEECCC--c--------------------------------
Confidence 11233333221 111 1222221 1111223344444432221 1
Q ss_pred cCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEE
Q 010443 371 STPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 371 ~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~T~sG~tA~~iSr~RP~~PIiav 423 (510)
..|..+|..-....|+++|.+-.++|.++=+|=-.|++.-
T Consensus 455 -------------~TA~~iSr~RP~~PIia~T~~~~~aR~l~L~~GV~P~~~~ 494 (550)
T 3gr4_A 455 -------------RSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCK 494 (550)
T ss_dssp -------------HHHHHHHTTCCSSCEEEEESCHHHHHHGGGSTTEEEEECC
T ss_pred -------------HHHHHHHhhCCCCCEEEEcCCHHHHHHHhccCCeEEEEec
Confidence 2223333333334499999999999999999988887743
No 148
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=62.94 E-value=60 Score=32.96 Aligned_cols=95 Identities=16% Similarity=0.239 Sum_probs=58.6
Q ss_pred HHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 219 SDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 219 ~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
++.+.++++.++. .+.+++-.=..++++-+ .+. .|.+=||-+|+. .++ +++.+.+.|||+|+.
T Consensus 78 e~~~~L~~~~~~~--Gi~~~st~fD~~svd~l---~~~~v~~~KI~S~~~~------N~p-----LL~~va~~gKPviLs 141 (350)
T 3g8r_A 78 EQMQKLVAEMKAN--GFKAICTPFDEESVDLI---EAHGIEIIKIASCSFT------DWP-----LLERIARSDKPVVAS 141 (350)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEECSHHHHHHH---HHTTCCEEEECSSSTT------CHH-----HHHHHHTSCSCEEEE
T ss_pred HHHHHHHHHHHHc--CCcEEeccCCHHHHHHH---HHcCCCEEEECccccc------CHH-----HHHHHHhhCCcEEEE
Confidence 4444555544443 24444444444444333 334 788899988773 233 345566789999999
Q ss_pred hhhhHhhhcCCCCChHhHHHHHHHHHc-CCceEEeccCCCCCCCH
Q 010443 298 TQMLESMIKSPRPTRAEATDVANAVLD-GTDCVMLSGESAAGAYP 341 (510)
Q Consensus 298 TqmLeSM~~~~~PtraEv~Dv~~av~~-G~D~imLs~Eta~G~yP 341 (510)
|-| -|-.|+...++++.. |.+-++|--++. ||
T Consensus 142 tGm---------stl~Ei~~Ave~i~~~g~~viLlhC~s~---YP 174 (350)
T 3g8r_A 142 TAG---------ARREDIDKVVSFMLHRGKDLTIMHCVAE---YP 174 (350)
T ss_dssp CTT---------CCHHHHHHHHHHHHTTTCCEEEEECCCC---SS
T ss_pred CCC---------CCHHHHHHHHHHHHHcCCCEEEEecCCC---CC
Confidence 885 266899888887765 677666655543 66
No 149
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=62.68 E-value=25 Score=33.85 Aligned_cols=115 Identities=13% Similarity=0.096 Sum_probs=64.3
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEe--C-CcccCCCCchhH
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVA--R-GDLGMEIPVEKI 276 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~Ig--r-gDLg~e~~~~~v 276 (510)
+.+.+.|+|++.+|-.- .+++.++.+.+++.|-+ ++..+.-....+.+.+|++.++|.+.. . |=-|...+.+ .
T Consensus 116 ~~~~~aG~dgvii~dl~-~ee~~~~~~~~~~~gl~--~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~-~ 191 (262)
T 2ekc_A 116 RLSREKGIDGFIVPDLP-PEEAEELKAVMKKYVLS--FVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREKLP-Y 191 (262)
T ss_dssp HHHHHTTCCEEECTTCC-HHHHHHHHHHHHHTTCE--ECCEECTTCCHHHHHHHHHHCSSCEEEESSCC----------C
T ss_pred HHHHHcCCCEEEECCCC-HHHHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCCCcC-c
Confidence 55678899999998553 47788888888776533 333333223446788899888765422 1 1222322221 0
Q ss_pred HHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 277 FLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 277 ~~~qk~ii~~~~~~-gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
.-....++..+++ +.|+.+..- .=|.. ++.. +..|+|+++..
T Consensus 192 -~~~~~~v~~vr~~~~~pv~vG~G---------I~t~e---~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 192 -ERIKKKVEEYRELCDKPVVVGFG---------VSKKE---HARE-IGSFADGVVVG 234 (262)
T ss_dssp -HHHHHHHHHHHHHCCSCEEEESS---------CCSHH---HHHH-HHTTSSEEEEC
T ss_pred -ccHHHHHHHHHhhcCCCEEEeCC---------CCCHH---HHHH-HHcCCCEEEEC
Confidence 1122344444443 789877433 22232 3344 67899999985
No 150
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=62.49 E-value=43 Score=32.99 Aligned_cols=150 Identities=10% Similarity=0.041 Sum_probs=87.3
Q ss_pred CCCChhcHHHHHhccCcC--CCCEEEEcCCCCHHHHHHHHHHhccCCC--CceEEEEecCHHHHhchHHH--------Hh
Q 010443 188 PTLTEKDKEDILRWGVPN--NIDMIALSFVRKGSDLVNVRKVLGPHAK--NIQLMSKVENQEGVVNFDDI--------LR 255 (510)
Q Consensus 188 p~lt~~D~~di~~~a~~~--g~d~I~~sfV~sa~dv~~vr~~l~~~~~--~~~IiakIEt~~av~nldeI--------~~ 255 (510)
|.-|+.|.+.+-+-+.+. |++.|+++ +..+..+++.+...+. .+++.+-|=-|.|-...+.. ..
T Consensus 43 p~~T~~dI~~lc~eA~~~~~~~aaVCV~----p~~V~~a~~~L~~~gs~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~ 118 (281)
T 2a4a_A 43 ENGTEDDIRELCNESVKTCPFAAAVCVY----PKFVKFINEKIKQEINPFKPKIACVINFPYGTDSMEKVLNDTEKALDD 118 (281)
T ss_dssp TTCCHHHHHHHHHHHHSSSSCCSEEEEC----GGGHHHHHHHHHHHSSSCCSEEEEEESTTTCCSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCccEEEEC----HHHHHHHHHHhhccCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHc
Confidence 566888888877788888 99999886 4577777777752233 67888877555544333322 22
Q ss_pred hcCeeEEeCCcccCCCCc---hhHH---HHHHHHHHHHHHc-CCCe--EEehhhhHhhhcCCCCChHh-HHHHHH-HHHc
Q 010443 256 ETDSFMVARGDLGMEIPV---EKIF---LAQKMMIYKCNLV-GKPV--VTATQMLESMIKSPRPTRAE-ATDVAN-AVLD 324 (510)
Q Consensus 256 ~~DgI~IgrgDLg~e~~~---~~v~---~~qk~ii~~~~~~-gkpv--ivaTqmLeSM~~~~~PtraE-v~Dv~~-av~~ 324 (510)
-+|.|-+- +.++. .+.. .+.+.|.+...+. ++|+ |+.|-.| +..| +..... ++..
T Consensus 119 GAdEIDmV-----inig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---------~d~e~i~~A~~ia~ea 184 (281)
T 2a4a_A 119 GADEIDLV-----INYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGEL---------KTEDLIIKTTLAVLNG 184 (281)
T ss_dssp TCSEEEEE-----CCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHH---------CSHHHHHHHHHHHHTT
T ss_pred CCCEEEEe-----cchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccC---------CcHHHHHHHHHHHHHh
Confidence 24544221 12221 1122 3333333333322 4563 7777766 4556 333333 7789
Q ss_pred CCceEEeccCCCCCCCHHHHHHHHHHHHHHH
Q 010443 325 GTDCVMLSGESAAGAYPEIAVKIMRRICIEA 355 (510)
Q Consensus 325 G~D~imLs~Eta~G~yP~~~V~~m~~i~~~a 355 (510)
|+|.|=-|.-=.-|.--.+.|+.|++.+++.
T Consensus 185 GADfVKTSTGf~~~gAT~edv~lm~~~v~~~ 215 (281)
T 2a4a_A 185 NADFIKTSTGKVQINATPSSVEYIIKAIKEY 215 (281)
T ss_dssp TCSEEECCCSCSSCCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 9999865521111334578999999988764
No 151
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=62.27 E-value=31 Score=31.76 Aligned_cols=124 Identities=12% Similarity=0.112 Sum_probs=67.6
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHH----HhchHHHHhh-----cCeeEEeCCcccCC
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEG----VVNFDDILRE-----TDSFMVARGDLGME 270 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~a----v~nldeI~~~-----~DgI~IgrgDLg~e 270 (510)
+.+.+.|+|+|.+..--..+-++.+++. + .+.+.+..-+... .+.++.++.. .||+.+.+.
T Consensus 72 ~~~~~~Gad~vtvh~~~g~~~i~~~~~~----~-gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~----- 141 (208)
T 2czd_A 72 RKVFGAGADYVIVHTFVGRDSVMAVKEL----G-EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT----- 141 (208)
T ss_dssp HHHHHTTCSEEEEESTTCHHHHHHHHTT----S-EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS-----
T ss_pred HHHHhcCCCEEEEeccCCHHHHHHHHHh----C-CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC-----
Confidence 3446789999988776666655555432 2 4555555433221 3334444443 367655421
Q ss_pred CCchhHHHHHHHHHHHHHHcC-CCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHH
Q 010443 271 IPVEKIFLAQKMMIYKCNLVG-KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMR 349 (510)
Q Consensus 271 ~~~~~v~~~qk~ii~~~~~~g-kpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~ 349 (510)
..+++..+.+ .+ + .+++++ . ...+. -.++..++..|+|.+..+.--....-|.++++.++
T Consensus 142 -~~~~i~~lr~----~~---~~~~~iv~-g-------GI~~~---g~~~~~~~~aGad~vvvGr~I~~a~dp~~~~~~l~ 202 (208)
T 2czd_A 142 -RPERIGYIRD----RL---KEGIKILA-P-------GIGAQ---GGKAKDAVKAGADYIIVGRAIYNAPNPREAAKAIY 202 (208)
T ss_dssp -STHHHHHHHH----HS---CTTCEEEE-C-------CCCSS---TTHHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHH
T ss_pred -ChHHHHHHHH----hC---CCCeEEEE-C-------CCCCC---CCCHHHHHHcCCCEEEEChHHhcCCCHHHHHHHHH
Confidence 2334433322 22 4 355543 2 11222 22466777889999998644434456988888876
Q ss_pred HHH
Q 010443 350 RIC 352 (510)
Q Consensus 350 ~i~ 352 (510)
+.+
T Consensus 203 ~~i 205 (208)
T 2czd_A 203 DEI 205 (208)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 152
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=62.07 E-value=42 Score=32.88 Aligned_cols=121 Identities=17% Similarity=0.173 Sum_probs=71.1
Q ss_pred hccCcCCCCEE-EEc-------------CCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeEEeC
Q 010443 200 RWGVPNNIDMI-ALS-------------FVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVAR 264 (510)
Q Consensus 200 ~~a~~~g~d~I-~~s-------------fV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~Igr 264 (510)
+.+.+.|+|.| .+- ..++.+.++++++.. ++.++.|+=.-. ++.++...+. +|+|. +.
T Consensus 35 ~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~-----~iPv~~k~r~g~-~~~~~~~~a~GAd~V~-~~ 107 (305)
T 2nv1_A 35 KIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAV-----SIPVMAKARIGH-IVEARVLEAMGVDYID-ES 107 (305)
T ss_dssp HHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHC-----SSCEEEEECTTC-HHHHHHHHHHTCSEEE-EC
T ss_pred HHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhC-----CCCEEecccccc-hHHHHHHHHCCCCEEE-Ee
Confidence 55677899999 442 233677777776543 467777764310 1222222222 79996 44
Q ss_pred CcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHH
Q 010443 265 GDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIA 344 (510)
Q Consensus 265 gDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~ 344 (510)
.++.. +++ .+.+. ++..|.|+++... + ..+...++..|+|.+.++||+..| -..++
T Consensus 108 ~~l~~----~~~----~~~i~-~~~~g~~v~~~~~-----------~---~~e~~~a~~~Gad~V~~~G~~g~g-~~~~~ 163 (305)
T 2nv1_A 108 EVLTP----ADE----EFHLN-KNEYTVPFVCGCR-----------D---LGEATRRIAEGASMLRTKGEPGTG-NIVEA 163 (305)
T ss_dssp TTSCC----SCS----SCCCC-GGGCSSCEEEEES-----------S---HHHHHHHHHTTCSEEEECCCTTSC-CTHHH
T ss_pred ccCCH----HHH----HHHHH-HhccCCcEEEEeC-----------C---HHHHHHHHHCCCCEEEeccccCcc-chHHH
Confidence 44422 111 11222 4567899887542 2 224456678999999999998777 55666
Q ss_pred HHHHHHH
Q 010443 345 VKIMRRI 351 (510)
Q Consensus 345 V~~m~~i 351 (510)
+...+.+
T Consensus 164 ~~h~rt~ 170 (305)
T 2nv1_A 164 VRHMRKV 170 (305)
T ss_dssp HHHHHHH
T ss_pred Hhhhhhh
Confidence 6665553
No 153
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=61.90 E-value=10 Score=40.49 Aligned_cols=52 Identities=13% Similarity=0.311 Sum_probs=43.0
Q ss_pred CCCeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHH
Q 010443 19 LPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRA 70 (510)
Q Consensus 19 ~~~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~ 70 (510)
..+..+-+.+|+.....+.++.|+++|+++.=+|.+|+..+...+.++.+|+
T Consensus 242 ~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~ 293 (511)
T 3usb_A 242 QGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRA 293 (511)
T ss_dssp TSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred ccceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHH
Confidence 3456677888888788999999999999999999999988776666666665
No 154
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=60.70 E-value=25 Score=34.69 Aligned_cols=94 Identities=11% Similarity=0.083 Sum_probs=58.2
Q ss_pred hccCcCCCCEEEEcC------CCCHHHHHHH-HHHhccCCC-CceEEEEec---CHHHHhchHHHHhh-cCeeEEeCCcc
Q 010443 200 RWGVPNNIDMIALSF------VRKGSDLVNV-RKVLGPHAK-NIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 267 (510)
Q Consensus 200 ~~a~~~g~d~I~~sf------V~sa~dv~~v-r~~l~~~~~-~~~IiakIE---t~~av~nldeI~~~-~DgI~IgrgDL 267 (510)
++.++.|+|++++.- .-|.++=.++ +...+..+. ++.+|+-+= |.++++......+. +|++|+-+-.+
T Consensus 35 ~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 114 (301)
T 3m5v_A 35 KRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYY 114 (301)
T ss_dssp HHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 678899999998742 2233443333 333444455 789999883 56666666665554 79999986544
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 268 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 268 g~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 115 ~~-~s~~~l~~~f~~v---a~a~~lPiilY 140 (301)
T 3m5v_A 115 NK-PTQQGLYEHYKAI---AQSVDIPVLLY 140 (301)
T ss_dssp SC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 32 2334544444444 45558999875
No 155
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=60.67 E-value=25 Score=32.75 Aligned_cols=127 Identities=14% Similarity=0.149 Sum_probs=68.1
Q ss_pred HHHHhccCcCCCCEEEEcCCCC--------HHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCee---EEeC
Q 010443 196 EDILRWGVPNNIDMIALSFVRK--------GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSF---MVAR 264 (510)
Q Consensus 196 ~di~~~a~~~g~d~I~~sfV~s--------a~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI---~Igr 264 (510)
+.+ +.+++.|+|+|.+..... .+-++.+++.. .+..++..+.|.+....+ ...-+|.| +.+.
T Consensus 92 ~~i-~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~----~~~~v~~~~~t~~ea~~a--~~~Gad~i~~~v~g~ 164 (234)
T 1yxy_A 92 TEV-DQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKY----PNQLLMADISTFDEGLVA--HQAGIDFVGTTLSGY 164 (234)
T ss_dssp HHH-HHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHC----TTCEEEEECSSHHHHHHH--HHTTCSEEECTTTTS
T ss_pred HHH-HHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhC----CCCeEEEeCCCHHHHHHH--HHcCCCEEeeecccc
Confidence 345 566889999998854422 24455555543 246688877776543221 11226777 2232
Q ss_pred --CcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHH
Q 010443 265 --GDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPE 342 (510)
Q Consensus 265 --gDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~ 342 (510)
+..+ .....+..+ +++ +.. +.|++...- .-|.. |+..+...|+|++++.. +.=. |.
T Consensus 165 ~~~~~~--~~~~~~~~i-~~~---~~~-~ipvia~GG---------I~s~~---~~~~~~~~Gad~v~vGs--al~~-p~ 222 (234)
T 1yxy_A 165 TPYSRQ--EAGPDVALI-EAL---CKA-GIAVIAEGK---------IHSPE---EAKKINDLGVAGIVVGG--AITR-PK 222 (234)
T ss_dssp STTSCC--SSSCCHHHH-HHH---HHT-TCCEEEESC---------CCSHH---HHHHHHTTCCSEEEECH--HHHC-HH
T ss_pred CCCCcC--CCCCCHHHH-HHH---HhC-CCCEEEECC---------CCCHH---HHHHHHHCCCCEEEEch--HHhC-hH
Confidence 2211 111222222 222 223 799887543 33333 44556667999999874 2222 77
Q ss_pred HHHHHHHHH
Q 010443 343 IAVKIMRRI 351 (510)
Q Consensus 343 ~~V~~m~~i 351 (510)
++++.+.+.
T Consensus 223 ~~~~~l~~~ 231 (234)
T 1yxy_A 223 EIAERFIEA 231 (234)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777666543
No 156
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=60.57 E-value=12 Score=35.16 Aligned_cols=128 Identities=13% Similarity=0.054 Sum_probs=63.5
Q ss_pred cCcCCCCEEEEcCC---CCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcc-cCCCC---ch
Q 010443 202 GVPNNIDMIALSFV---RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDL-GMEIP---VE 274 (510)
Q Consensus 202 a~~~g~d~I~~sfV---~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDL-g~e~~---~~ 274 (510)
+.+.|+|+|.++.- ...+++.+..+...+.| +..+.-+-+.+-.+.+.++ -.+.|-+.+.++ | .| ..
T Consensus 78 ~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~G--l~~iv~v~~~~e~~~~~~~--~~~~i~~~~~~~iG--tG~~~~t 151 (219)
T 2h6r_A 78 IKDCGCKGTLINHSEKRMLLADIEAVINKCKNLG--LETIVCTNNINTSKAVAAL--SPDCIAVEPPELIG--TGIPVSK 151 (219)
T ss_dssp HHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHT--CEEEEEESSSHHHHHHTTT--CCSEEEECCCC------------
T ss_pred HHHcCCCEEEECCccccCCHHHHHHHHHHHHHCC--CeEEEEeCCchHHHHHHhC--CCCEEEEEeccccc--cCCCCcc
Confidence 45679999999986 34455665555554443 4455555333333333322 134555556665 2 22 00
Q ss_pred hHHH-HHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHH
Q 010443 275 KIFL-AQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIM 348 (510)
Q Consensus 275 ~v~~-~qk~ii~~~~~~--gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m 348 (510)
.-+. ++ .+.+..++. +.|++.- ...=+. .++..+...|+|+++..+-.-.-..|.+.++-+
T Consensus 152 ~~~~~~~-~~~~~ir~~~~~~~ii~g---------gGI~~~---~~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l 215 (219)
T 2h6r_A 152 ANPEVVE-GTVRAVKEINKDVKVLCG---------AGISKG---EDVKAALDLGAEGVLLASGVVKAKNVEEAIREL 215 (219)
T ss_dssp ----CSH-HHHHHHHHHCTTCEEEEC---------SSCCSH---HHHHHHHTTTCCCEEESHHHHTCSSHHHHHHHH
T ss_pred CCHHHHH-HHHHHHHhccCCCeEEEE---------eCcCcH---HHHHHHhhCCCCEEEEcHHHhCcccHHHHHHHH
Confidence 0011 22 333334443 5676642 222222 334445667999999864444445576666554
No 157
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=60.39 E-value=19 Score=31.62 Aligned_cols=48 Identities=15% Similarity=0.209 Sum_probs=30.6
Q ss_pred EEecCCCEEEEEecCCCCCCccEEecCCC-------CccccCCCCCEEEEeCC----eEEEEEEEE
Q 010443 101 IQLKEGQEITVSTDYDFKGNEEMITMSYK-------KLPVDVKPGNTILCADG----TITLTVLSC 155 (510)
Q Consensus 101 i~l~~G~~v~l~~~~~~~~~~~~i~v~~~-------~~~~~v~~gd~i~idDG----~i~l~V~~~ 155 (510)
|..+.|..+++|.+. .|++... -+.+.|++||.|++.|| ...-+|.++
T Consensus 58 I~t~~g~~L~lTp~H-------~i~v~~~~~~~~~~v~A~~l~~GD~v~~~~~~~~~~~~~~V~~v 116 (145)
T 1at0_A 58 LHTDGGAVLTVTPAH-------LVSVWQPESQKLTFVFADRIEEKNQVLVRDVETGELRPQRVVKV 116 (145)
T ss_dssp EEETTSCEEEECTTC-------EEEEEETTTTEEEEEEGGGCCTTCEEEEECTTTCCEEEEEEEEE
T ss_pred EEECCCCEEEEeCCC-------EEEEecCCCCcEEEEEHHHCcCCCEEEEecCCCCCEEEEEEEEE
Confidence 455667777777652 2333221 36789999999999987 333445554
No 158
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=60.30 E-value=3.8 Score=38.62 Aligned_cols=66 Identities=20% Similarity=0.171 Sum_probs=40.5
Q ss_pred cHHHHHhccCcCCCCEEEEc-----CCCCH--HHHHHHHHHhccCCCCceEEE--EecCHHHHhchHHHHhh-cCeeEEe
Q 010443 194 DKEDILRWGVPNNIDMIALS-----FVRKG--SDLVNVRKVLGPHAKNIQLMS--KVENQEGVVNFDDILRE-TDSFMVA 263 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~s-----fV~sa--~dv~~vr~~l~~~~~~~~Iia--kIEt~~av~nldeI~~~-~DgI~Ig 263 (510)
|...+.+...+.|+|+|.+. |.... +.++++++.. ++.+++ .|.+++- +++.++. +|+|+++
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~~-----~ipv~v~ggi~~~~~---~~~~l~~Gad~V~lg 103 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKL-----DVQVELSGGIRDDES---LAAALATGCARVNVG 103 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCHHHHHHHHHHC-----SSEEEEESSCCSHHH---HHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChHHHHHHHHHhc-----CCcEEEECCCCCHHH---HHHHHHcCCCEEEEC
Confidence 33344355678899999983 55444 4455554432 355555 4666553 5555555 8999999
Q ss_pred CCcc
Q 010443 264 RGDL 267 (510)
Q Consensus 264 rgDL 267 (510)
+..|
T Consensus 104 ~~~l 107 (244)
T 2y88_A 104 TAAL 107 (244)
T ss_dssp HHHH
T ss_pred chHh
Confidence 7665
No 159
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=59.96 E-value=11 Score=38.29 Aligned_cols=45 Identities=20% Similarity=0.361 Sum_probs=35.3
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHH
Q 010443 24 IVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRA 70 (510)
Q Consensus 24 Ii~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~ 70 (510)
+.+-+|... .+.++.++++|++++-||++||..+.+.+.++.+|+
T Consensus 98 vga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~ 142 (361)
T 3khj_A 98 VGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 142 (361)
T ss_dssp CEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHH
T ss_pred EEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHH
Confidence 455566543 899999999999999999999988766666666555
No 160
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=59.82 E-value=24 Score=34.66 Aligned_cols=70 Identities=20% Similarity=0.285 Sum_probs=51.2
Q ss_pred CCeEEEEecCCCCC---------C----HHHHHHHHHhCCCeEEEee-cC--C-----CHHHHHHHHHHHHHHHHhcCCc
Q 010443 20 PKTKIVCTLGPASR---------S----VPMLEKLLRAGMNVARFNF-SH--G-----THEYQQETLNNLRAAMHNTQIL 78 (510)
Q Consensus 20 ~~tkIi~TiGp~~~---------~----~~~l~~li~~G~~~~RiN~-sh--~-----~~~~~~~~i~~ir~~~~~~~~~ 78 (510)
.+++|++-|.+.-+ + .+..++|++.|+++.=+|. |- | ..+|..+++.-++...++.+.|
T Consensus 13 ~~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~p 92 (282)
T 1aj0_A 13 SHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVW 92 (282)
T ss_dssp TSCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCE
T ss_pred CCCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCe
Confidence 46899998876542 1 3455779999999999999 43 2 1688888888888887776655
Q ss_pred EEEEecCCCCeeE
Q 010443 79 CAVMLDTKGPEIR 91 (510)
Q Consensus 79 v~i~~Dl~Gp~iR 91 (510)
|.+|+.-|++=
T Consensus 93 --iSIDT~~~~va 103 (282)
T 1aj0_A 93 --ISVDTSKPEVI 103 (282)
T ss_dssp --EEEECCCHHHH
T ss_pred --EEEeCCCHHHH
Confidence 56688866543
No 161
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=59.54 E-value=37 Score=32.29 Aligned_cols=35 Identities=6% Similarity=0.079 Sum_probs=27.1
Q ss_pred hccCcCCCCEEEEcCCC----------CHHHHHHHHHHhccCCCC
Q 010443 200 RWGVPNNIDMIALSFVR----------KGSDLVNVRKVLGPHAKN 234 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~----------sa~dv~~vr~~l~~~~~~ 234 (510)
+.+.+.|+|+|-+.+-. +.+++.++++.+++.|-.
T Consensus 37 ~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 81 (295)
T 3cqj_A 37 QLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVR 81 (295)
T ss_dssp HHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCE
T ss_pred HHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCe
Confidence 77788999999987654 467788888888876533
No 162
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=59.43 E-value=21 Score=35.37 Aligned_cols=96 Identities=9% Similarity=0.110 Sum_probs=58.5
Q ss_pred HHhccCcCCCCEEEEcC------CCCHHHHHHHHH-HhccCCCCceEEEEe---cCHHHHhchHHHHhh-cCeeEEeCCc
Q 010443 198 ILRWGVPNNIDMIALSF------VRKGSDLVNVRK-VLGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARGD 266 (510)
Q Consensus 198 i~~~a~~~g~d~I~~sf------V~sa~dv~~vr~-~l~~~~~~~~IiakI---Et~~av~nldeI~~~-~DgI~IgrgD 266 (510)
+.++.++.|+|+|++.- .=|.++=.++-+ .++..+.++.+|+-+ -|.++++......+. +|++++-+-.
T Consensus 41 lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 120 (304)
T 3l21_A 41 LANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPY 120 (304)
T ss_dssp HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 33688899999998742 223444444433 334445678999988 456666666655554 7999998544
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 267 LGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 267 Lg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
+.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 121 y~~-~s~~~l~~~f~~v---a~a~~lPiilY 147 (304)
T 3l21_A 121 YSK-PPQRGLQAHFTAV---ADATELPMLLY 147 (304)
T ss_dssp SSC-CCHHHHHHHHHHH---HTSCSSCEEEE
T ss_pred CCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 322 2334444444444 45558999875
No 163
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=58.49 E-value=23 Score=32.77 Aligned_cols=128 Identities=14% Similarity=0.139 Sum_probs=61.9
Q ss_pred hccCcCCCCEEEEcC--CCCHHHHHHHHHHhccCCCCce-----------EEEEecC------HHHHhchHHHHhh-cCe
Q 010443 200 RWGVPNNIDMIALSF--VRKGSDLVNVRKVLGPHAKNIQ-----------LMSKVEN------QEGVVNFDDILRE-TDS 259 (510)
Q Consensus 200 ~~a~~~g~d~I~~sf--V~sa~dv~~vr~~l~~~~~~~~-----------IiakIEt------~~av~nldeI~~~-~Dg 259 (510)
+.+++.|+|+|.+.. .++++.+.++.+.++. ..+. +..++.. ...++.+..+.+. +|.
T Consensus 93 ~~~~~~Gad~V~i~~~~~~~~~~~~~~~~~~g~--~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~ 170 (253)
T 1h5y_A 93 TTLFRAGADKVSVNTAAVRNPQLVALLAREFGS--QSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGE 170 (253)
T ss_dssp HHHHHHTCSEEEESHHHHHCTHHHHHHHHHHCG--GGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSE
T ss_pred HHHHHcCCCEEEEChHHhhCcHHHHHHHHHcCC--CcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCE
Confidence 344667999998763 2334444444443321 1111 1233321 1223345555555 798
Q ss_pred eEEeCCcc---cCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCC
Q 010443 260 FMVARGDL---GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESA 336 (510)
Q Consensus 260 I~IgrgDL---g~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta 336 (510)
|.+..-+. +....++.+ +++ ++..+.|++...- .-+. .|+..+...|+|++++..--.
T Consensus 171 i~~~~~~~~g~~~~~~~~~i----~~l---~~~~~~pvia~GG---------i~~~---~~~~~~~~~Ga~~v~vgsal~ 231 (253)
T 1h5y_A 171 ILLTSIDRDGTGLGYDVELI----RRV---ADSVRIPVIASGG---------AGRV---EHFYEAAAAGADAVLAASLFH 231 (253)
T ss_dssp EEEEETTTTTTCSCCCHHHH----HHH---HHHCSSCEEEESC---------CCSH---HHHHHHHHTTCSEEEESHHHH
T ss_pred EEEecccCCCCcCcCCHHHH----HHH---HHhcCCCEEEeCC---------CCCH---HHHHHHHHcCCcHHHHHHHHH
Confidence 88753332 111222222 222 2334789887533 2222 455666678999999964322
Q ss_pred CCCC-HHHHHHHH
Q 010443 337 AGAY-PEIAVKIM 348 (510)
Q Consensus 337 ~G~y-P~~~V~~m 348 (510)
.+.. +.+..++|
T Consensus 232 ~~~~~~~~~~~~l 244 (253)
T 1h5y_A 232 FRVLSIAQVKRYL 244 (253)
T ss_dssp TTSSCHHHHHHHH
T ss_pred cCCCCHHHHHHHH
Confidence 2332 33444443
No 164
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=58.42 E-value=37 Score=35.97 Aligned_cols=122 Identities=17% Similarity=0.225 Sum_probs=72.3
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.++.+. .|..+....+...-..|++.+....+... ..+..+++...+++.+....++.
T Consensus 127 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~ 194 (527)
T 3pc3_A 127 GLAMACAVKGYKCIIV-----------MPEKMSNEKVSALRTLGAKIIRTPTEAAY-DSPEGLIYVAQQLQRETPNSIVL 194 (527)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTTSCT-TSTTSHHHHHHHHHHHSSSEECC
T ss_pred HHHHHHHHhCCeEEEE-----------EcCCCCHHHHHHHHHCCCEEEEeCCCCCc-ccHHHHHHHHHHHHHhCCCcEec
Confidence 4556788999998763 23333344556666789998877654211 12334555556655543332211
Q ss_pred HHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPLESLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
.+ | ..|.++..--...+.++..+++ .++||+.+-+|.++.-+++ ..|.+.|+++
T Consensus 195 ~~-~-------~n~~n~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigv 254 (527)
T 3pc3_A 195 DQ-Y-------RNAGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGV 254 (527)
T ss_dssp CT-T-------TCTHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CC-C-------CCcchHHHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEE
Confidence 00 1 0111111222334567777764 7999999999998766655 4799999999
No 165
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=58.11 E-value=41 Score=34.24 Aligned_cols=117 Identities=15% Similarity=0.155 Sum_probs=64.9
Q ss_pred CCCCEEEEcC----------CCCHHHHHHHHHHhccC------CCCceEEEEecCHHHHhchHHHHhh-----cCeeEEe
Q 010443 205 NNIDMIALSF----------VRKGSDLVNVRKVLGPH------AKNIQLMSKVENQEGVVNFDDILRE-----TDSFMVA 263 (510)
Q Consensus 205 ~g~d~I~~sf----------V~sa~dv~~vr~~l~~~------~~~~~IiakIEt~~av~nldeI~~~-----~DgI~Ig 263 (510)
..+|+|-+.+ .++.+.+.++-+.+.+. ..++.|+.||=--...+++.+|++. +|||.+-
T Consensus 175 ~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ 254 (367)
T 3zwt_A 175 PLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVT 254 (367)
T ss_dssp GGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred hhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 3589888753 23445555544433221 1468899999321112345555553 6999875
Q ss_pred -----CCc-----ccCCCC----chhHHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCc
Q 010443 264 -----RGD-----LGMEIP----VEKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTD 327 (510)
Q Consensus 264 -----rgD-----Lg~e~~----~~~v~~~qk~ii~~~~~~--gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D 327 (510)
|-+ ++.+.+ ....+...+.+-...++. ..|+|....+- | ..|+..++..|+|
T Consensus 255 ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~---------s---~~da~~~l~~GAd 322 (367)
T 3zwt_A 255 NTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS---------S---GQDALEKIRAGAS 322 (367)
T ss_dssp CCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC---------S---HHHHHHHHHHTCS
T ss_pred CCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC---------C---HHHHHHHHHcCCC
Confidence 211 111121 122333444444444455 68998765433 2 4577788888999
Q ss_pred eEEecc
Q 010443 328 CVMLSG 333 (510)
Q Consensus 328 ~imLs~ 333 (510)
+||+..
T Consensus 323 ~V~vgr 328 (367)
T 3zwt_A 323 LVQLYT 328 (367)
T ss_dssp EEEESH
T ss_pred EEEECH
Confidence 999973
No 166
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=58.05 E-value=44 Score=33.08 Aligned_cols=120 Identities=12% Similarity=0.079 Sum_probs=70.5
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccc
Q 010443 281 KMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLD 360 (510)
Q Consensus 281 k~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~ 360 (510)
.-+..+|+..|.|+.+.. |..+....+...-..|++.+....+. . ..++.+...+++++-...+
T Consensus 86 ~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~~---~-~~~~~~~a~~l~~~~~~~~- 149 (325)
T 3dwg_A 86 ISLAMAARLKGYRLICVM-----------PENTSVERRQLLELYGAQIIFSAAEG---G-SNTAVATAKELAATNPSWV- 149 (325)
T ss_dssp HHHHHHHHHHTCEEEEEE-----------ESSSCHHHHHHHHHHTCEEEEECSTT---T-HHHHHHHHHHHHHHCTTSB-
T ss_pred HHHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCCC---C-HHHHHHHHHHHHHhCCCeE-
Confidence 456677899999987631 33222334455566799988776431 2 3466666666544322221
Q ss_pred hHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcC-CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 361 YRAVFKEMIRSTPLPMSPLESLASSAVRTANKAR-AKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~-a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
|...|. .|..+..-....+.++.++++ .+.||+.+-+|.+..-+++ ..|.+.|+++
T Consensus 150 ~~~~~~-------np~~~~~g~~t~~~Ei~~q~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigV 210 (325)
T 3dwg_A 150 MLYQYG-------NPANTDSHYCGTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAA 210 (325)
T ss_dssp CCCTTT-------CHHHHHHHHHTHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEE
T ss_pred eCCCCC-------CHHHHHHHHHHHHHHHHHhcCCCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEE
Confidence 110010 010011112334556776663 7999999999998766555 4899999999
No 167
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=58.05 E-value=16 Score=38.77 Aligned_cols=52 Identities=15% Similarity=0.284 Sum_probs=42.6
Q ss_pred CCeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 010443 20 PKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAA 71 (510)
Q Consensus 20 ~~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~ 71 (510)
.+..+-+.+|...+..+.++.|+++|++++=||.+|+......+.++.+|+.
T Consensus 216 grl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~ 267 (490)
T 4avf_A 216 GRLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQT 267 (490)
T ss_dssp SCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHH
T ss_pred CcceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHH
Confidence 3556667788877889999999999999999999999887766677666653
No 168
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=57.97 E-value=56 Score=31.87 Aligned_cols=97 Identities=13% Similarity=0.109 Sum_probs=60.4
Q ss_pred HHHhccCc-CCCCEEEEc------CCCCHHHHHHHHH-HhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeC
Q 010443 197 DILRWGVP-NNIDMIALS------FVRKGSDLVNVRK-VLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVAR 264 (510)
Q Consensus 197 di~~~a~~-~g~d~I~~s------fV~sa~dv~~vr~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~Igr 264 (510)
.+.++.++ .|+|+|++. +.-|.++=.++-+ ..+..+.++.+|+-+= |.++++......+. +|++|+-+
T Consensus 28 ~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 33378888 999999873 3344444444433 3444456789999984 47777766665554 79999875
Q ss_pred CcccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 265 GDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 265 gDLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
-.+.- .+.+.+...-+.|. .+.+.|+++.
T Consensus 108 P~y~~-~~~~~l~~~f~~va---~a~~lPiilY 136 (293)
T 1f6k_A 108 PFYYK-FSFPEIKHYYDTII---AETGSNMIVY 136 (293)
T ss_dssp CCSSC-CCHHHHHHHHHHHH---HHHCCCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHHH---HhCCCCEEEE
Confidence 54421 23445555555554 4457899874
No 169
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=57.88 E-value=38 Score=33.36 Aligned_cols=97 Identities=11% Similarity=0.143 Sum_probs=60.3
Q ss_pred HHHhccCcCCCCEEEEc------CCCCHHHHHHHHH-HhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCC
Q 010443 197 DILRWGVPNNIDMIALS------FVRKGSDLVNVRK-VLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARG 265 (510)
Q Consensus 197 di~~~a~~~g~d~I~~s------fV~sa~dv~~vr~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~Igrg 265 (510)
.+.++.++.|+|+|++. +.-|.++=.++-+ ..+..+.++.+|+-+= |.++++....-.+. +|++|+-+-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 116 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAP 116 (301)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 33377889999999863 2334444444433 3334455788999884 47777776666554 799998765
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 266 DLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 266 DLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.+.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 117 ~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 144 (301)
T 1xky_A 117 YYNK-PSQEGMYQHFKAI---AESTPLPVMLY 144 (301)
T ss_dssp CSSC-CCHHHHHHHHHHH---HHTCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 4422 2334544444444 55568999874
No 170
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=57.83 E-value=27 Score=33.63 Aligned_cols=115 Identities=11% Similarity=0.044 Sum_probs=65.4
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEe--C-CcccCCCCc-hh
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVA--R-GDLGMEIPV-EK 275 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~Ig--r-gDLg~e~~~-~~ 275 (510)
+.+.+.|+|++.++-.-. +++.++.+.+++.|.+ .+.-+.-....+.+.+|++.++|++.. . |=-|..-+. +.
T Consensus 116 ~~~~~aGadgii~~d~~~-e~~~~~~~~~~~~g~~--~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~ 192 (268)
T 1qop_A 116 ARCEQVGVDSVLVADVPV-EESAPFRQAALRHNIA--PIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENRGALP 192 (268)
T ss_dssp HHHHHHTCCEEEETTCCG-GGCHHHHHHHHHTTCE--EECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC--C
T ss_pred HHHHHcCCCEEEEcCCCH-HHHHHHHHHHHHcCCc--EEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccCCCch
Confidence 445678999999986654 6788888888776533 233332223446788889888754322 1 122222221 11
Q ss_pred HHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 276 IFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 276 v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
+...-+++- +..+.|+++... .=|. .++..++..|+|+++..
T Consensus 193 ~~~~i~~lr---~~~~~pi~vggG---------I~t~---e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 193 LHHLIEKLK---EYHAAPALQGFG---------ISSP---EQVSAAVRAGAAGAISG 234 (268)
T ss_dssp CHHHHHHHH---HTTCCCEEEESS---------CCSH---HHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHH---hccCCcEEEECC---------CCCH---HHHHHHHHcCCCEEEEC
Confidence 122222221 123789877443 2222 34566788899999985
No 171
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=57.70 E-value=20 Score=33.96 Aligned_cols=127 Identities=13% Similarity=0.151 Sum_probs=69.2
Q ss_pred ccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhch----HHHHhh-----cCeeEEeCCcccCCC
Q 010443 201 WGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNF----DDILRE-----TDSFMVARGDLGMEI 271 (510)
Q Consensus 201 ~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nl----deI~~~-----~DgI~IgrgDLg~e~ 271 (510)
...+.|+|+|.+.-.-..+.++.+.+.+++.|..+.+++..-++.+.+.+ +.+++. .||++.+. .
T Consensus 86 ~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~a------t 159 (228)
T 3m47_A 86 ATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPS------T 159 (228)
T ss_dssp HHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCS------S
T ss_pred HHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECC------C
Confidence 34568999999865555677888888887666656566677666543322 223322 36765542 1
Q ss_pred CchhHHHHHHHHHHHHHHcCC-CeEEehhhhHhhhcCCCCC-hHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHH
Q 010443 272 PVEKIFLAQKMMIYKCNLVGK-PVVTATQMLESMIKSPRPT-RAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMR 349 (510)
Q Consensus 272 ~~~~v~~~qk~ii~~~~~~gk-pvivaTqmLeSM~~~~~Pt-raEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~ 349 (510)
..+++.. +-+ ..|. ..++ | |- |++-.+. .++..|+|.++...--.....|.++++.+.
T Consensus 160 ~~~e~~~----ir~---~~~~~~~iv-~-----------PGI~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~~~ 219 (228)
T 3m47_A 160 RPERLSR----LRE---IIGQDSFLI-S-----------PGVGAQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAGAI 219 (228)
T ss_dssp CHHHHHH----HHH---HHCSSSEEE-E-----------CC----------CGGGTCSEEEECHHHHTSSCHHHHHHHHH
T ss_pred ChHHHHH----HHH---hcCCCCEEE-e-----------cCcCcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHHHH
Confidence 1222222 211 2233 2222 2 21 3333356 778899999888755555678988887776
Q ss_pred HHHH
Q 010443 350 RICI 353 (510)
Q Consensus 350 ~i~~ 353 (510)
+.++
T Consensus 220 ~~~~ 223 (228)
T 3m47_A 220 ESIK 223 (228)
T ss_dssp HHC-
T ss_pred HHHH
Confidence 6443
No 172
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=57.65 E-value=12 Score=38.54 Aligned_cols=51 Identities=14% Similarity=0.297 Sum_probs=40.7
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 010443 21 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAA 71 (510)
Q Consensus 21 ~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~ 71 (510)
+..+.+.+|+.....+.++.++++|++.+=||++||+++...+.++.+|+.
T Consensus 141 ~~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~ 191 (404)
T 1eep_A 141 KLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK 191 (404)
T ss_dssp CBCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred CceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH
Confidence 345677788655568889999999999999999999887777777777754
No 173
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=56.41 E-value=26 Score=34.87 Aligned_cols=97 Identities=9% Similarity=0.168 Sum_probs=58.7
Q ss_pred HHHhccCcCCCCEEEEcC------CCCHHHHHHH-HHHhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCC
Q 010443 197 DILRWGVPNNIDMIALSF------VRKGSDLVNV-RKVLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARG 265 (510)
Q Consensus 197 di~~~a~~~g~d~I~~sf------V~sa~dv~~v-r~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~Igrg 265 (510)
.+.++.++.|+|+|++.- .=|.++=.++ +..++..+.++.||+-+= |.++++......+. +||+|+-+-
T Consensus 47 ~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 126 (315)
T 3si9_A 47 NFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTP 126 (315)
T ss_dssp HHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 333688899999998532 1233333333 333444456788998883 66677666665555 799998854
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 266 DLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 266 DLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.+.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 127 ~y~~-~~~~~l~~~f~~v---a~a~~lPiilY 154 (315)
T 3si9_A 127 YYNR-PNQRGLYTHFSSI---AKAISIPIIIY 154 (315)
T ss_dssp CSSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHcCCCCEEEE
Confidence 4422 2334555444555 44558999875
No 174
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=56.28 E-value=1.4e+02 Score=31.77 Aligned_cols=150 Identities=18% Similarity=0.234 Sum_probs=86.4
Q ss_pred cEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEeeCeEecCCCCcccCCcc------c-c--------
Q 010443 122 EMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVV------V-D-------- 186 (510)
Q Consensus 122 ~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~i~~~v~~~G~l~s~K~vnlp~~~------~-~-------- 186 (510)
+.|++|.-.+--. .+-++++.+.++|+. +..+ -.+-|.--++..+++|..- + .
T Consensus 156 d~IlidDG~i~l~-----V~~v~~~~i~~~V~~----gG~L---~~~KgvNlPg~~~~lp~lTekD~~Dl~~f~~~~~vD 223 (511)
T 3gg8_A 156 NTILIADGSLSVK-----VVEVGSDYVITQAQN----TATI---GERKNMNLPNVKVQLPVIGEKDKHDILNFGIPMGCN 223 (511)
T ss_dssp CEEEETTTTEEEE-----EEEECSSEEEEEESS----CEEE---CSSCBEECTTCCCCSCSSCHHHHHHHHHTTTTTTCC
T ss_pred CEEEEECCEEEEE-----EEEEeCCEEEEEEEe----CeEE---cCCcceecCCCccCCCCCCHHHHHHHHHHHHHcCCC
Confidence 4566665333211 133556778777741 2222 1234555666777776531 1 1
Q ss_pred ---CC-CCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccC-------------------------------
Q 010443 187 ---LP-TLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPH------------------------------- 231 (510)
Q Consensus 187 ---lp-~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~------------------------------- 231 (510)
++ .=+..|...++++.-+.|.+.-+++++++++-++.+.+++...
T Consensus 224 ~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~sDgimVaRGDLgvei~~e~v~~~qk~ii~~~~ 303 (511)
T 3gg8_A 224 FIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAEADGIMIARGDLGMEIPPEKVFLAQKMMIAKCN 303 (511)
T ss_dssp EEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhCCeEEEecchhcCcCCHHHHHHHHHHHHHHHH
Confidence 11 1257788888556556777888999999999998887765311
Q ss_pred -CCCceEEE------EecCH-----HHHhchHHHHhhcCeeEE----eCCcccCCCCchhHHHHHHHHHHHHH
Q 010443 232 -AKNIQLMS------KVENQ-----EGVVNFDDILRETDSFMV----ARGDLGMEIPVEKIFLAQKMMIYKCN 288 (510)
Q Consensus 232 -~~~~~Iia------kIEt~-----~av~nldeI~~~~DgI~I----grgDLg~e~~~~~v~~~qk~ii~~~~ 288 (510)
...+.|+| +|+++ |.-+=..+|+.-+|++|+ +.|+. |. +....+.+|+..+.
T Consensus 304 ~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA~G~y----Pv-eaV~~M~~I~~~aE 371 (511)
T 3gg8_A 304 VVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETANGEF----PV-ITVETMARICYEAE 371 (511)
T ss_dssp HTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC----HH-HHHHHHHHHHHHHH
T ss_pred HcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCCC----HH-HHHHHHHHHHHHHH
Confidence 11233444 55553 444446777777999999 45544 22 33344556655554
No 175
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=56.15 E-value=14 Score=38.81 Aligned_cols=51 Identities=25% Similarity=0.444 Sum_probs=40.3
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 010443 21 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAA 71 (510)
Q Consensus 21 ~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~ 71 (510)
+-.+.+-+|+.....+.++.++++|++++=++++||......+.++.+|+.
T Consensus 225 ~l~vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~ 275 (494)
T 1vrd_A 225 RLLVGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD 275 (494)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred hhccccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH
Confidence 334455677766668899999999999999999999887777777777764
No 176
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=56.12 E-value=44 Score=32.89 Aligned_cols=97 Identities=18% Similarity=0.150 Sum_probs=61.2
Q ss_pred HHHhccCcCCCCEEEEc------CCCCHHHHHHHHH-HhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCC
Q 010443 197 DILRWGVPNNIDMIALS------FVRKGSDLVNVRK-VLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARG 265 (510)
Q Consensus 197 di~~~a~~~g~d~I~~s------fV~sa~dv~~vr~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~Igrg 265 (510)
.+.++.++.|+|+|++. +.-|.++=.++-+ ..+..+.++.+|+-+= |.++++......+. +|++|+-+-
T Consensus 36 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 115 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTP 115 (303)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCC
Confidence 33378889999999873 2334444444433 3334455789999884 47777766665554 799998755
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHcC-CCeEEe
Q 010443 266 DLGMEIPVEKIFLAQKMMIYKCNLVG-KPVVTA 297 (510)
Q Consensus 266 DLg~e~~~~~v~~~qk~ii~~~~~~g-kpviva 297 (510)
.+.- .+.+.+...-+.|.+ +.+ .|+++.
T Consensus 116 ~y~~-~s~~~l~~~f~~va~---a~~~lPiilY 144 (303)
T 2wkj_A 116 FYYP-FSFEEHCDHYRAIID---SADGLPMVVY 144 (303)
T ss_dssp CSSC-CCHHHHHHHHHHHHH---HHTTCCEEEE
T ss_pred CCCC-CCHHHHHHHHHHHHH---hCCCCCEEEE
Confidence 4422 244566656666654 445 898874
No 177
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=56.11 E-value=71 Score=34.15 Aligned_cols=217 Identities=18% Similarity=0.200 Sum_probs=119.3
Q ss_pred EeCCeEEEEEEEEeCCCCeEEEEEeeCeEecCCCCcccCCcc------c---------c---CC-CCChhcHHHHHhccC
Q 010443 143 CADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVV------V---------D---LP-TLTEKDKEDILRWGV 203 (510)
Q Consensus 143 idDG~i~l~V~~~~~~~~~i~~~v~~~G~l~s~K~vnlp~~~------~---------~---lp-~lt~~D~~di~~~a~ 203 (510)
++++.+..+|+. +..+ -.+-|.--++..+++|..- + + ++ .=+..|...++++.-
T Consensus 181 ~~~~~v~~~V~~----gG~L---~~~KgvNlPg~~~~lp~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~ 253 (520)
T 3khd_A 181 THEDHVITEVLN----SAVI---GERKNMNLPNVKVDLPIISEKDKNDILNFAIPMGCNFIAASFIQSADDVRLIRNLLG 253 (520)
T ss_dssp ECSSCEEEEECC-----CCC---CSSCEEECTTSCCCSCSSCHHHHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHHHT
T ss_pred EECCEEEEEEEe----CeEE---eCCceeecCCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHH
Confidence 456677777752 2222 1334555667777777631 1 1 12 125778888855655
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHHhccC----------C---------------------CCceEE-E------EecCH-
Q 010443 204 PNNIDMIALSFVRKGSDLVNVRKVLGPH----------A---------------------KNIQLM-S------KVENQ- 244 (510)
Q Consensus 204 ~~g~d~I~~sfV~sa~dv~~vr~~l~~~----------~---------------------~~~~Ii-a------kIEt~- 244 (510)
+.|.+.-+++++++++-++.+.+++... | .+..+| | +|+++
T Consensus 254 ~~g~~i~IIAKIE~~eav~nldeIl~~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~ 333 (520)
T 3khd_A 254 PRGRHIKIIPKIENIEGIIHFDKILAESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPR 333 (520)
T ss_dssp TTTTTSEEEEEECSHHHHHTHHHHHHHSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSS
T ss_pred hcCCCCcEEEEECCHHHHHhHHHHHHhCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCC
Confidence 6777888899999999999988876321 0 012233 3 56553
Q ss_pred ----HHHhchHHHHhhcCeeEE----eCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhh-cCCCC-ChHh
Q 010443 245 ----EGVVNFDDILRETDSFMV----ARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMI-KSPRP-TRAE 314 (510)
Q Consensus 245 ----~av~nldeI~~~~DgI~I----grgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~-~~~~P-traE 314 (510)
|.-+=...|+.-+|++|+ +.|+. |. +....+.+|+..+.+.- ..-+.++... ..+.| +..|
T Consensus 334 PTRAEvsDVanAVldGaDavMLSgETA~G~y----Pv-eaV~~M~~I~~~aE~~~----~~~~~~~~~~~~~~~~~~~~~ 404 (520)
T 3khd_A 334 PTRAEVTDVANAVLDGTDCVMLSGETAGGKF----PV-EAVTIMSKICLEAEACI----DYKLLYQSLVNAIETPISVQE 404 (520)
T ss_dssp CCHHHHHHHHHHHHHTCSEEEESHHHHSCSC----HH-HHHHHHHHHHHHHHTTC----CHHHHHHHHHHHSCSCCCHHH
T ss_pred ccHHHHHHHHHHHHhCCCEEEecccccCCcC----HH-HHHHHHHHHHHHHHhhh----hhhhhHhhhhhccCCCCCHHH
Confidence 333346677777999999 45554 22 33445566665554321 1112222221 11222 2222
Q ss_pred H---HHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCchHHHHHHHHHHHH
Q 010443 315 A---TDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTAN 391 (510)
Q Consensus 315 v---~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~ 391 (510)
. +-+..|-..++.+|+.-.+| | ..|..+|.
T Consensus 405 aia~aa~~~A~~l~a~aIv~~T~S--G---------------------------------------------~TA~~vSr 437 (520)
T 3khd_A 405 AVARSAVETAESIQASLIIALTET--G---------------------------------------------YTARLIAK 437 (520)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSS--S---------------------------------------------HHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEECCC--c---------------------------------------------HHHHHHHh
Confidence 1 11111223344444432221 1 22333343
Q ss_pred hcCCcEEEEEcCCchHHHHHHhhCCCCcEEE
Q 010443 392 KARAKLIVVLTRGGTTAKLVAKYRPAVPILS 422 (510)
Q Consensus 392 ~~~a~aIvv~T~sG~tA~~iSr~RP~~PIia 422 (510)
.-....|+++|.+-.++|.++=+|=-.|++.
T Consensus 438 ~RP~~PIia~T~~~~~~r~l~L~~GV~p~~~ 468 (520)
T 3khd_A 438 YKPSCTILALSASDSTVKCLNVHRGVTCIKV 468 (520)
T ss_dssp TCCSSEEEEEESCHHHHHHGGGSTTEEEEEC
T ss_pred cCCCCCEEEEcCCHHHHHHHhccCCeEEEEe
Confidence 3334569999999999999999998888764
No 178
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=55.78 E-value=23 Score=35.32 Aligned_cols=58 Identities=16% Similarity=0.287 Sum_probs=39.0
Q ss_pred CCCCCCHHHHHHHHHhCCCeEEEeecCCCH----------HHHHHHHHHHHHHHHhcCCcEEEEecCCCC
Q 010443 29 GPASRSVPMLEKLLRAGMNVARFNFSHGTH----------EYQQETLNNLRAAMHNTQILCAVMLDTKGP 88 (510)
Q Consensus 29 Gp~~~~~~~l~~li~~G~~~~RiN~sh~~~----------~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 88 (510)
|+...+.+.++.|-+.|+|++||-+++... +...+.++.+=+.+.+.| +.+++|+-..
T Consensus 39 ~~p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~G--i~vildlH~~ 106 (345)
T 3ndz_A 39 GNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND--MYVIINLHHE 106 (345)
T ss_dssp SCCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEECCCSC
T ss_pred CCCCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEecCCc
Confidence 334447899999999999999999886421 223344444444455555 5688888754
No 179
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=55.55 E-value=27 Score=35.22 Aligned_cols=97 Identities=7% Similarity=0.063 Sum_probs=60.7
Q ss_pred HHHhccCcCCCCEEEEc------CCCCHHHHHHHHH-HhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCC
Q 010443 197 DILRWGVPNNIDMIALS------FVRKGSDLVNVRK-VLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARG 265 (510)
Q Consensus 197 di~~~a~~~g~d~I~~s------fV~sa~dv~~vr~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~Igrg 265 (510)
.+.++.++.|+|+|++. +.-|.++=.++-+ .++..+..+.||+-+= |.++++......+. +|++|+-+-
T Consensus 56 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 135 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINP 135 (343)
T ss_dssp HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 33378889999999863 3334444444433 3434455788999884 57777766665554 799998765
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 266 DLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 266 DLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.+.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 136 ~Y~~-~s~~~l~~~f~~V---A~a~~lPiilY 163 (343)
T 2v9d_A 136 YYWK-VSEANLIRYFEQV---ADSVTLPVMLY 163 (343)
T ss_dssp SSSC-CCHHHHHHHHHHH---HHTCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 4422 2344555555555 45568999874
No 180
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=55.47 E-value=1.3e+02 Score=28.49 Aligned_cols=142 Identities=9% Similarity=0.060 Sum_probs=0.0
Q ss_pred hhcHHHHHhccCcCCCCEEEE--cCCC--------------------CHHHHHHHHHHhccCCCCceEEEEe-cCHHHHh
Q 010443 192 EKDKEDILRWGVPNNIDMIAL--SFVR--------------------KGSDLVNVRKVLGPHAKNIQLMSKV-ENQEGVV 248 (510)
Q Consensus 192 ~~D~~di~~~a~~~g~d~I~~--sfV~--------------------sa~dv~~vr~~l~~~~~~~~IiakI-Et~~av~ 248 (510)
+.-.+.+ +.+.+.|+|+|-+ ||.. +.++..++-+.+++. .++.++.+. .++.-..
T Consensus 32 ~~~~~~~-~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~~~~~~~~ 109 (262)
T 1rd5_A 32 ATTAEAL-RLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSYYKPIMFR 109 (262)
T ss_dssp HHHHHHH-HHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECCSHHHHSC
T ss_pred HHHHHHH-HHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCcHHHHH
Q ss_pred chHHHHhh-cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCc
Q 010443 249 NFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTD 327 (510)
Q Consensus 249 nldeI~~~-~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D 327 (510)
.++...++ +||+++ .|+..+ --++++..|+++|.+.+.. -+|. |..|...-.....+|..
T Consensus 110 ~~~~a~~aGadgv~v--~d~~~~--------~~~~~~~~~~~~g~~~i~~--------~a~~-t~~e~~~~~~~~~~g~v 170 (262)
T 1rd5_A 110 SLAKMKEAGVHGLIV--PDLPYV--------AAHSLWSEAKNNNLELVLL--------TTPA-IPEDRMKEITKASEGFV 170 (262)
T ss_dssp CTHHHHHTTCCEEEC--TTCBTT--------THHHHHHHHHHTTCEECEE--------ECTT-SCHHHHHHHHHHCCSCE
T ss_pred HHHHHHHcCCCEEEE--cCCChh--------hHHHHHHHHHHcCCceEEE--------ECCC-CCHHHHHHHHhcCCCeE
Q ss_pred eEEeccCCCCC--CCHHHHHHHHHHHHHH
Q 010443 328 CVMLSGESAAG--AYPEIAVKIMRRICIE 354 (510)
Q Consensus 328 ~imLs~Eta~G--~yP~~~V~~m~~i~~~ 354 (510)
.++-..-+.=- .+|....+.+.++.+.
T Consensus 171 ~~~s~~G~tG~~~~~~~~~~~~i~~v~~~ 199 (262)
T 1rd5_A 171 YLVSVNGVTGPRANVNPRVESLIQEVKKV 199 (262)
T ss_dssp EEECSSCCBCTTSCBCTHHHHHHHHHHHH
T ss_pred EEecCCCCCCCCcCCCchHHHHHHHHHhh
No 181
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=55.23 E-value=23 Score=34.10 Aligned_cols=54 Identities=17% Similarity=0.188 Sum_probs=37.7
Q ss_pred CCCHHHHHHHH-HhCCCeEEEeecCC---------CHHHHHHHHHHHHHHHHhcCCcEEEEecCCC
Q 010443 32 SRSVPMLEKLL-RAGMNVARFNFSHG---------THEYQQETLNNLRAAMHNTQILCAVMLDTKG 87 (510)
Q Consensus 32 ~~~~~~l~~li-~~G~~~~RiN~sh~---------~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 87 (510)
..+.+.++.|. +.|+|++|+-++.. +++...+.++.+=+.+.+.|. .+++|+-+
T Consensus 38 ~~~~~di~~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~Gi--~vild~h~ 101 (293)
T 1tvn_A 38 FYTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAEDM--YVIIDFHS 101 (293)
T ss_dssp GCSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTTC--EEEEEEEC
T ss_pred CCCHHHHHHHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHCCC--EEEEEcCC
Confidence 34688999998 49999999988762 224455566666566667775 45677754
No 182
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=54.79 E-value=37 Score=33.70 Aligned_cols=94 Identities=11% Similarity=0.014 Sum_probs=55.5
Q ss_pred hccCcCCCCEEEEcCC------CCHHHHHHH-HHHhccCCCCceEEEEe--cCHHHHhchHHHHhh-cCeeEEeCCcccC
Q 010443 200 RWGVPNNIDMIALSFV------RKGSDLVNV-RKVLGPHAKNIQLMSKV--ENQEGVVNFDDILRE-TDSFMVARGDLGM 269 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV------~sa~dv~~v-r~~l~~~~~~~~IiakI--Et~~av~nldeI~~~-~DgI~IgrgDLg~ 269 (510)
++.++.|+|+|++.-. -|.++=.++ +..++..+..+.+|+-+ -|.++++......+. +|++++-+-.. .
T Consensus 40 ~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~y-~ 118 (316)
T 3e96_A 40 DRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPIH-P 118 (316)
T ss_dssp HHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCCC-S
T ss_pred HHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCCC-C
Confidence 6888999999886422 133343333 33334445678899988 344444444443333 69999874333 2
Q ss_pred CCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 270 EIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 270 e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
..+.+.+...-+.|.+++ +.|+++.
T Consensus 119 ~~s~~~l~~~f~~va~a~---~lPiilY 143 (316)
T 3e96_A 119 YVTAGGVYAYFRDIIEAL---DFPSLVY 143 (316)
T ss_dssp CCCHHHHHHHHHHHHHHH---TSCEEEE
T ss_pred CCCHHHHHHHHHHHHHhC---CCCEEEE
Confidence 234456555556665544 7999875
No 183
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=54.55 E-value=1.2e+02 Score=30.03 Aligned_cols=115 Identities=19% Similarity=0.245 Sum_probs=69.5
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.|+.+-- |..+....+...-..|++.+...+. .-++.+...+++++-...+..
T Consensus 90 a~A~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~v~~~------~~~~~~~a~~l~~~~~~~~i~ 152 (346)
T 3l6b_A 90 ALTYAAKLEGIPAYIVV-----------PQTAPDCKKLAIQAYGASIVYCEPS------DESRENVAKRVTEETEGIMVH 152 (346)
T ss_dssp HHHHHHHHTTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECSS------HHHHHHHHHHHHHHHTCEECC
T ss_pred HHHHHHHHhCCCEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCC------HHHHHHHHHHHHHhcCCEEEC
Confidence 45667999999987631 2222223455566789998766432 356777777766544322110
Q ss_pred HHHHHHHHhcCCCCCCchHHHHHHHHHHHHhc-CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPLESLASSAVRTANKA-RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~-~a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
. | ..| .....-...+.++.+++ +.+.||+.+-+|.+..-+++ .+|.+.|+++
T Consensus 153 ~--~-------~np-~~~~g~~t~~~Ei~~q~~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigV 209 (346)
T 3l6b_A 153 P--N-------QEP-AVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAA 209 (346)
T ss_dssp S--S-------SCH-HHHHHHHHHHHHHHHHSTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred C--C-------CCh-HHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEE
Confidence 0 0 000 01122233455666666 57999999999998666654 4799999999
No 184
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=54.39 E-value=47 Score=32.50 Aligned_cols=96 Identities=15% Similarity=0.127 Sum_probs=59.5
Q ss_pred HHhccCcCCCCEEEEc------CCCCHHHHHHHHH-HhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCCc
Q 010443 198 ILRWGVPNNIDMIALS------FVRKGSDLVNVRK-VLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGD 266 (510)
Q Consensus 198 i~~~a~~~g~d~I~~s------fV~sa~dv~~vr~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~IgrgD 266 (510)
+.++.++.|+|++++. +.-|.++=.++-+ ..+..+.++.+|+-+= |.++++....-.+. +|++|+-+-.
T Consensus 26 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 105 (294)
T 2ehh_A 26 LIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPY 105 (294)
T ss_dssp HHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 3378889999999873 2334444444433 3434445788999884 47777766665554 7999987654
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 267 LGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 267 Lg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
+.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 106 y~~-~s~~~l~~~f~~v---a~a~~lPiilY 132 (294)
T 2ehh_A 106 YNK-PTQRGLYEHFKTV---AQEVDIPIIIY 132 (294)
T ss_dssp SSC-CCHHHHHHHHHHH---HHHCCSCEEEE
T ss_pred CCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 422 2334444444444 55668999874
No 185
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=54.39 E-value=41 Score=34.10 Aligned_cols=63 Identities=14% Similarity=0.223 Sum_probs=42.3
Q ss_pred CeEEEEecCCCCCCH-------HHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEEEecCC
Q 010443 21 KTKIVCTLGPASRSV-------PMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTK 86 (510)
Q Consensus 21 ~tkIi~TiGp~~~~~-------~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 86 (510)
+...-+++|-...++ +..+++.++|.+.+.+...|++.++-.+.++.+|++. |.-+.|++|..
T Consensus 123 ~vp~~~~~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~---G~d~~l~vDan 192 (382)
T 2gdq_A 123 EIPVYASFQSYSDSPQWISRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA---GSSITMILDAN 192 (382)
T ss_dssp EEEEEEECCCBCSSTTHHHHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH---CTTSEEEEECT
T ss_pred ceeEEEEecccCCCcccHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhh---CCCCEEEEECC
Confidence 455555664222334 3445677899999999999988888778888888765 33345555553
No 186
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=54.37 E-value=46 Score=33.98 Aligned_cols=76 Identities=13% Similarity=0.119 Sum_probs=48.3
Q ss_pred cccccccccCCCCCCCCCeEEEEec-CCCCCCHHHH-----HHHHHhCCCeEEEeecCC------CHHHHHHHHHHHHHH
Q 010443 4 IDIEGLLRDVPNDKRLPKTKIVCTL-GPASRSVPML-----EKLLRAGMNVARFNFSHG------THEYQQETLNNLRAA 71 (510)
Q Consensus 4 ~~~~~~~~~~p~~~~~~~tkIi~Ti-Gp~~~~~~~l-----~~li~~G~~~~RiN~sh~------~~~~~~~~i~~ir~~ 71 (510)
.-+.++|+..+. .+...-+|+ |.-..+++.+ +++++.|.+.+.+..... +.++-.+.++.+|++
T Consensus 112 ~Pv~~LLGg~~r----~~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a 187 (393)
T 4dwd_A 112 QPIYKLLGGAWR----TRLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVREL 187 (393)
T ss_dssp SBHHHHTTCCSC----SEEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHH
T ss_pred CcHHHHcCCCCC----CceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHH
Confidence 345567774322 356777887 4433455555 666788999999999754 667666777777765
Q ss_pred HHhcCCcEEEEecCC
Q 010443 72 MHNTQILCAVMLDTK 86 (510)
Q Consensus 72 ~~~~~~~v~i~~Dl~ 86 (510)
. |.-+.+++|..
T Consensus 188 ~---g~~~~l~vDaN 199 (393)
T 4dwd_A 188 L---GPDAVIGFDAN 199 (393)
T ss_dssp H---CTTCCEEEECT
T ss_pred h---CCCCeEEEECC
Confidence 4 33345566644
No 187
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=54.17 E-value=43 Score=32.65 Aligned_cols=97 Identities=10% Similarity=0.034 Sum_probs=59.9
Q ss_pred HHHhccCcCCCCEEEEc------CCCCHHHHHHHHH-HhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCC
Q 010443 197 DILRWGVPNNIDMIALS------FVRKGSDLVNVRK-VLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARG 265 (510)
Q Consensus 197 di~~~a~~~g~d~I~~s------fV~sa~dv~~vr~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~Igrg 265 (510)
.+.++.++.|+|++++. +.-|.++=.++-+ ..+..+.++.+|+-+= |.++++....-.+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 104 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITP 104 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 33377889999999863 2234444444433 3333445788999984 47777766665554 799998765
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 266 DLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 266 DLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.+.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 105 ~y~~-~s~~~l~~~f~~i---a~a~~lPiilY 132 (289)
T 2yxg_A 105 YYNK-PTQEGLRKHFGKV---AESINLPIVLY 132 (289)
T ss_dssp CSSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 4422 2444555555555 45568999874
No 188
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=54.00 E-value=55 Score=34.82 Aligned_cols=96 Identities=15% Similarity=0.117 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHhccCCCCceEEEE-ecCHHHHhchHHHHhh-cCeeEEe-CCcccCCCCchhHHHHHHHHHHHHHH----
Q 010443 217 KGSDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNL---- 289 (510)
Q Consensus 217 sa~dv~~vr~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-~DgI~Ig-rgDLg~e~~~~~v~~~qk~ii~~~~~---- 289 (510)
+.++++.+|+.. +..|+.| +-+ .+......+. +|+|.++ .|--..+.+...+ .+..++.++++.
T Consensus 331 ~~~~i~~lr~~~-----~~PvivKgv~~---~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~-~~l~~v~~~v~~~~~~ 401 (511)
T 1kbi_A 331 TWKDIEELKKKT-----KLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPI-EVLAETMPILEQRNLK 401 (511)
T ss_dssp CHHHHHHHHHHC-----SSCEEEEEECS---HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHH-HHHHHHHHHHHTTTCB
T ss_pred HHHHHHHHHHHh-----CCcEEEEeCCC---HHHHHHHHHcCCCEEEEcCCCCccCCCCCchH-HHHHHHHHHHHhhccC
Confidence 467788888765 4678888 333 2223333333 7999995 2211112222222 333455555542
Q ss_pred cCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 290 VGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 290 ~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
...|+|....+- --.|+..++..|||++|+..
T Consensus 402 ~~ipVia~GGI~------------~g~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 402 DKLEVFVDGGVR------------RGTDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp TTBEEEEESSCC------------SHHHHHHHHHHTCSEEEECH
T ss_pred CCcEEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 267888765433 24688999999999999974
No 189
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=53.88 E-value=68 Score=31.13 Aligned_cols=115 Identities=15% Similarity=0.103 Sum_probs=69.5
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.++.+-. |..+....+...-..|++.+...++. . ..++.+...++..+ +..++-
T Consensus 76 a~A~~a~~~G~~~~i~~-----------p~~~~~~k~~~~~~~Ga~V~~~~~~~---~-~~~~~~~a~~l~~~-~~~~~~ 139 (304)
T 1ve1_A 76 GLAMIAASRGYRLILTM-----------PAQMSEERKRVLKAFGAELVLTDPER---R-MLAAREEALRLKEE-LGAFMP 139 (304)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTCCHHHHHHHHHTTCEEEEECTTT---H-HHHHHHHHHHHHHH-HTCBCC
T ss_pred HHHHHHHHcCCcEEEEe-----------CCCCCHHHHHHHHHcCCEEEEECCCC---C-HHHHHHHHHHHHhc-CCCEeC
Confidence 45677889999987631 22222334455666799987765431 1 34566666665544 222110
Q ss_pred HHHHHHHHhcCCCCCCch--HH-HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPL--ES-LASSAVRTANKAR--AKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~--~~-ia~~av~~A~~~~--a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
.+ | .++. .. ....+.++.++++ .+.||+.+-+|.++.-+++ ..|...|+++
T Consensus 140 ~~-~----------~n~~~~~g~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~v 199 (304)
T 1ve1_A 140 DQ-F----------KNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAV 199 (304)
T ss_dssp CT-T----------TCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEE
T ss_pred CC-C----------CChhHHHHHHHHHHHHHHHHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEE
Confidence 00 0 1121 11 1334567777774 6999999999999777665 4689999999
No 190
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=53.61 E-value=50 Score=32.78 Aligned_cols=120 Identities=13% Similarity=0.122 Sum_probs=70.4
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccc
Q 010443 281 KMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLD 360 (510)
Q Consensus 281 k~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~ 360 (510)
.-+..+|+..|.|+.+- .|..+....+...-..|++.+....+. . ..++++...++..+-+..+
T Consensus 85 ~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~-~~~~~~~a~~~~~~~~~~~- 148 (334)
T 3tbh_A 85 VSLAHLGAIRGYKVIIT-----------MPESMSLERRCLLRIFGAEVILTPAAL---G-MKGAVAMAKKIVAANPNAV- 148 (334)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHCTTEE-
T ss_pred HHHHHHHHHhCCCEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCCC---C-chHHHHHHHHHHHhCCCEE-
Confidence 45667888999998763 133333344566667899988776442 1 2455555555544322221
Q ss_pred hHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 361 YRAVFKEMIRSTPLPMSPLESLASSAVRTANKA--RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~--~a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
|-..|. .|..+..--...+.++..++ ..+.||+.+-+|.+..-+++ ..|.+.|+++
T Consensus 149 ~i~~~~-------np~n~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigV 210 (334)
T 3tbh_A 149 LADQFA-------TKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAV 210 (334)
T ss_dssp ECCTTT-------CHHHHHHHHHTHHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ECCccC-------ChhHHHHHHHHHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEE
Confidence 110010 01001111123456777776 47999999999998766555 4799999999
No 191
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=53.24 E-value=24 Score=33.01 Aligned_cols=114 Identities=9% Similarity=0.079 Sum_probs=59.0
Q ss_pred HHHhccCcCCCCEEEEcC--CCCHHHHHHHHHHhccCCCCce--EEEE-------ecCH-------HHHhchHHHHhh-c
Q 010443 197 DILRWGVPNNIDMIALSF--VRKGSDLVNVRKVLGPHAKNIQ--LMSK-------VENQ-------EGVVNFDDILRE-T 257 (510)
Q Consensus 197 di~~~a~~~g~d~I~~sf--V~sa~dv~~vr~~l~~~~~~~~--Iiak-------IEt~-------~av~nldeI~~~-~ 257 (510)
++ +.+++.|+|.|.+.. ..+++.+.++.+.++. .+. +=++ +.+. ..++.++...+. +
T Consensus 88 ~~-~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g~---~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G~ 163 (244)
T 2y88_A 88 SL-AAALATGCARVNVGTAALENPQWCARVIGEHGD---QVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGC 163 (244)
T ss_dssp HH-HHHHHTTCSEEEECHHHHHCHHHHHHHHHHHGG---GEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHTTC
T ss_pred HH-HHHHHcCCCEEEECchHhhChHHHHHHHHHcCC---CEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhCCC
Confidence 45 555778999988763 2444555555554432 111 1111 2222 124444555555 6
Q ss_pred CeeEEeCCccc---CCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHc---CCceEEe
Q 010443 258 DSFMVARGDLG---MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD---GTDCVML 331 (510)
Q Consensus 258 DgI~IgrgDLg---~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~---G~D~imL 331 (510)
|.|++-..+.. ....++.+.. + ++..+.|++...- .-+. .|+..+... |+|++|+
T Consensus 164 ~~i~~~~~~~~~~~~g~~~~~~~~----l---~~~~~ipvia~GG---------I~~~---~d~~~~~~~~~~Gad~v~v 224 (244)
T 2y88_A 164 SRFVVTDITKDGTLGGPNLDLLAG----V---ADRTDAPVIASGG---------VSSL---DDLRAIATLTHRGVEGAIV 224 (244)
T ss_dssp CCEEEEETTTTTTTSCCCHHHHHH----H---HTTCSSCEEEESC---------CCSH---HHHHHHHTTGGGTEEEEEE
T ss_pred CEEEEEecCCccccCCCCHHHHHH----H---HHhCCCCEEEECC---------CCCH---HHHHHHHhhccCCCCEEEE
Confidence 88887533332 1222222222 2 2335889887443 3333 345555555 9999999
Q ss_pred cc
Q 010443 332 SG 333 (510)
Q Consensus 332 s~ 333 (510)
..
T Consensus 225 G~ 226 (244)
T 2y88_A 225 GK 226 (244)
T ss_dssp CH
T ss_pred cH
Confidence 63
No 192
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=53.23 E-value=44 Score=32.75 Aligned_cols=94 Identities=15% Similarity=0.149 Sum_probs=57.9
Q ss_pred hccCcCCCCEEEEcCCC------CHHHHHHHHH-HhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCCccc
Q 010443 200 RWGVPNNIDMIALSFVR------KGSDLVNVRK-VLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDLG 268 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~------sa~dv~~vr~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~IgrgDLg 268 (510)
++.++.|+|++++.-.. |.++=.++-+ ..+..+.++.+|+-+= |.++++......+. +|++|+-+-.+.
T Consensus 35 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 114 (297)
T 3flu_A 35 DWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYN 114 (297)
T ss_dssp HHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 67889999999874322 3344333333 3333445788998883 56677666665554 799998754443
Q ss_pred CCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 269 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 269 ~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
- .+.+.+...-+.| |.+.+.|+++.
T Consensus 115 ~-~~~~~l~~~f~~v---a~a~~lPiilY 139 (297)
T 3flu_A 115 K-PSQEGIYQHFKTI---AEATSIPMIIY 139 (297)
T ss_dssp C-CCHHHHHHHHHHH---HHHCCSCEEEE
T ss_pred C-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 2 2334554444444 45558999875
No 193
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=53.18 E-value=87 Score=33.30 Aligned_cols=233 Identities=15% Similarity=0.157 Sum_probs=128.2
Q ss_pred ccEEecCCCCccccCCCCCEEEEe-CCeEEEEEEEEeCCCCeEEEEEeeCeEecCCCCcccCCcc---------------
Q 010443 121 EEMITMSYKKLPVDVKPGNTILCA-DGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVV--------------- 184 (510)
Q Consensus 121 ~~~i~v~~~~~~~~v~~gd~i~id-DG~i~l~V~~~~~~~~~i~~~v~~~G~l~s~K~vnlp~~~--------------- 184 (510)
.+.|++|.-.+--. .+-++ ++.+..+|. .+..+ -.+-|.=-++..+++|..-
T Consensus 139 G~~ilidDG~i~l~-----V~~~~~~~~i~~~v~----~gG~L---~~~KgvNlPg~~~~lp~ltekD~~dl~~~~~~~v 206 (499)
T 3hqn_D 139 GNYIYIDDGILILQ-----VQSHEDEQTLECTVT----NSHTI---SDRRGVNLPGCDVDLPAVSAKDRVDLQFGVEQGV 206 (499)
T ss_dssp TCEEEETTTTEEEE-----EEEEEETTEEEEEEC----SCEEE---ETTCBEECTTSCCCCCSSCHHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCEEEEE-----EEEEcCCCeEEEEEE----eCcEe---eCCCceecCCCCCCCCCCCHHHHHHHHHHHHcCC
Confidence 34677775443211 13344 456777764 22233 2344666677778887632
Q ss_pred --ccCCC-CChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhcc-------------------------------
Q 010443 185 --VDLPT-LTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGP------------------------------- 230 (510)
Q Consensus 185 --~~lp~-lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~------------------------------- 230 (510)
+-+|. =+..|...+.++.-+.|-+.-+++++++++-++.+.+++..
T Consensus 207 D~i~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c 286 (499)
T 3hqn_D 207 DMIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGVEIPAEKVVVAQKILISKC 286 (499)
T ss_dssp SEEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred CEEEecCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhCCcEEEccccccCcCCHHHHHHHHHHHHHHH
Confidence 11221 25788888855555567777888999999999998776631
Q ss_pred --CCCCceEEE------EecCH-----HHHhchHHHHhhcCeeEE----eCCcccCCCCchhHHHHHHHHHHHHHHcCCC
Q 010443 231 --HAKNIQLMS------KVENQ-----EGVVNFDDILRETDSFMV----ARGDLGMEIPVEKIFLAQKMMIYKCNLVGKP 293 (510)
Q Consensus 231 --~~~~~~Iia------kIEt~-----~av~nldeI~~~~DgI~I----grgDLg~e~~~~~v~~~qk~ii~~~~~~gkp 293 (510)
+| .+.|+| +|+++ |.-+=...|+.-+|++|+ +.|++ |. +....+.+|+..+.+.-
T Consensus 287 ~~ag-kpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLSgETA~G~y----Pv-eaV~~m~~I~~~aE~~~-- 358 (499)
T 3hqn_D 287 NVAG-KPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGETAKGKY----PN-EVVQYMARICLEAQSAL-- 358 (499)
T ss_dssp HHHT-CCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC----HH-HHHHHHHHHHHHHHHHC--
T ss_pred HHcC-CCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEeccccCCCC----HH-HHHHHHHHHHHHHHhcc--
Confidence 12 233443 56553 333336677777899999 56654 22 34455666766665431
Q ss_pred eEEehhhhHhhhc-CCCC-ChHhH---HHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHH
Q 010443 294 VVTATQMLESMIK-SPRP-TRAEA---TDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYRAVFKEM 368 (510)
Q Consensus 294 vivaTqmLeSM~~-~~~P-traEv---~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~ 368 (510)
...+.++.+.. .+.| +..|. +-+..|-..++.+|+.-.+| |
T Consensus 359 --~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~S--G------------------------------ 404 (499)
T 3hqn_D 359 --NEYVFFNSIKKLQHIPMSADEAVCSSAVNSVYETKAKAMVVLSNT--G------------------------------ 404 (499)
T ss_dssp --CHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHHHHTCSEEEEECSS--S------------------------------
T ss_pred --hhHHHHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCC--c------------------------------
Confidence 11233333222 1222 22221 11111223344444443221 1
Q ss_pred HhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEE
Q 010443 369 IRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILS 422 (510)
Q Consensus 369 ~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~T~sG~tA~~iSr~RP~~PIia 422 (510)
..|..+|..-....|+.+|.+-.++|.++=+|=-.|++.
T Consensus 405 ---------------~tA~~isr~RP~~pIia~T~~~~~~r~l~L~~GV~p~~~ 443 (499)
T 3hqn_D 405 ---------------RSARLVAKYRPNCPIVCVTTRLQTCRQLNITQGVESVFF 443 (499)
T ss_dssp ---------------HHHHHHHHTCCSSCEEEEESCHHHHHHGGGSTTEEEEEC
T ss_pred ---------------HHHHHHHhhCCCCCEEEEcCCHHHHHHhhccCCeEEEEe
Confidence 223333333333449999999999999999998888764
No 194
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=52.65 E-value=31 Score=32.29 Aligned_cols=129 Identities=15% Similarity=0.197 Sum_probs=61.9
Q ss_pred HHHHhccCcCCCCEEEEcC--CCCHHHHHHHHHHhccCCCCceEEEE-----ecCH-------HHHhchHHHHhh-cCee
Q 010443 196 EDILRWGVPNNIDMIALSF--VRKGSDLVNVRKVLGPHAKNIQLMSK-----VENQ-------EGVVNFDDILRE-TDSF 260 (510)
Q Consensus 196 ~di~~~a~~~g~d~I~~sf--V~sa~dv~~vr~~l~~~~~~~~Iiak-----IEt~-------~av~nldeI~~~-~DgI 260 (510)
+++ +.+++.|+|.|.+.. ..+++.+.++.+.++ ..+.+-.. +++. ..++.+....+. +|.|
T Consensus 88 ~~~-~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g---~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~i 163 (244)
T 1vzw_A 88 DTL-AAALATGCTRVNLGTAALETPEWVAKVIAEHG---DKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARY 163 (244)
T ss_dssp HHH-HHHHHTTCSEEEECHHHHHCHHHHHHHHHHHG---GGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCE
T ss_pred HHH-HHHHHcCCCEEEECchHhhCHHHHHHHHHHcC---CcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCEE
Confidence 345 556778999988753 234444555544443 22221111 2221 234444555555 6877
Q ss_pred EEe---CCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHc---CCceEEeccC
Q 010443 261 MVA---RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD---GTDCVMLSGE 334 (510)
Q Consensus 261 ~Ig---rgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~---G~D~imLs~E 334 (510)
++- |+.-+....++.+ +++ +...+.|++...- .-+. .|+..+... |+|++++..-
T Consensus 164 ~~~~~~~~~~~~g~~~~~~----~~i---~~~~~ipvia~GG---------I~~~---~d~~~~~~~~~~Gadgv~vG~a 224 (244)
T 1vzw_A 164 VVTDIAKDGTLQGPNLELL----KNV---CAATDRPVVASGG---------VSSL---DDLRAIAGLVPAGVEGAIVGKA 224 (244)
T ss_dssp EEEEC-------CCCHHHH----HHH---HHTCSSCEEEESC---------CCSH---HHHHHHHTTGGGTEEEEEECHH
T ss_pred EEeccCcccccCCCCHHHH----HHH---HHhcCCCEEEECC---------CCCH---HHHHHHHhhccCCCceeeeeHH
Confidence 764 2211111222222 222 2345899987543 3333 455555656 9999999743
Q ss_pred CCCCCCH-HHHHHH
Q 010443 335 SAAGAYP-EIAVKI 347 (510)
Q Consensus 335 ta~G~yP-~~~V~~ 347 (510)
-..+.++ .++++.
T Consensus 225 l~~~~~~~~~~~~~ 238 (244)
T 1vzw_A 225 LYAKAFTLEEALEA 238 (244)
T ss_dssp HHTTSSCHHHHHHH
T ss_pred HHcCCCCHHHHHHH
Confidence 3334333 344443
No 195
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=52.52 E-value=20 Score=29.90 Aligned_cols=42 Identities=33% Similarity=0.458 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHHhhCCCCcEEEE
Q 010443 381 SLASSAVRTANKARAKLIVVLTRG---------GTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 381 ~ia~~av~~A~~~~a~aIvv~T~s---------G~tA~~iSr~RP~~PIiav 423 (510)
..+...++.|.+.+++.||+-++. |.++..+.+.-| |||+.+
T Consensus 97 ~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 147 (147)
T 3hgm_A 97 RPSRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAH-CPVLVV 147 (147)
T ss_dssp CHHHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCS-SCEEEC
T ss_pred CHHHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCC-CCEEEC
Confidence 345666778899999999887753 778888888766 999864
No 196
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=52.48 E-value=96 Score=28.92 Aligned_cols=133 Identities=8% Similarity=-0.063 Sum_probs=77.5
Q ss_pred cCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCC--ceEEEEecCHHHHhchHHHHh-hcCeeEEeCCcccCC----CCch
Q 010443 202 GVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKN--IQLMSKVENQEGVVNFDDILR-ETDSFMVARGDLGME----IPVE 274 (510)
Q Consensus 202 a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~--~~IiakIEt~~av~nldeI~~-~~DgI~IgrgDLg~e----~~~~ 274 (510)
+.+.|+|++.+-.....+.++++++.+++.|.. ..-+..+-+. ..+.+.++++ -.|-+.+.++-++-. .+..
T Consensus 78 ~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~-~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~ 156 (221)
T 3exr_A 78 NAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDW-TYDQAQQWLDAGISQAIYHQSRDALLAGETWGEK 156 (221)
T ss_dssp HHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSC-CHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHH
T ss_pred HHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCC-CHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHH
Confidence 356899999997766777799988888766532 2233344422 3555666665 356666666555332 2223
Q ss_pred hHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHH
Q 010443 275 KIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 353 (510)
Q Consensus 275 ~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 353 (510)
++..+.+ .| ..+.++.+.-. + +|. ++..++..|+|.++...--.....|.++++.+.+.++
T Consensus 157 e~~~ir~----~~-~~~~~i~v~gG-I-------~~~-----~~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~~ 217 (221)
T 3exr_A 157 DLNKVKK----LI-EMGFRVSVTGG-L-------SVD-----TLKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEIK 217 (221)
T ss_dssp HHHHHHH----HH-HHTCEEEEESS-C-------CGG-----GGGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHH----hh-cCCceEEEECC-C-------CHH-----HHHHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHHH
Confidence 3333322 22 23444444211 1 222 2235677899999987544445679998887776543
No 197
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=52.48 E-value=77 Score=31.25 Aligned_cols=129 Identities=14% Similarity=0.110 Sum_probs=73.9
Q ss_pred hccCcCCCCEEEEc-CCCCH---HHHH---HHHHHhccCCCCceEEEEecCHHH---------HhchHHHHhh--cCeeE
Q 010443 200 RWGVPNNIDMIALS-FVRKG---SDLV---NVRKVLGPHAKNIQLMSKVENQEG---------VVNFDDILRE--TDSFM 261 (510)
Q Consensus 200 ~~a~~~g~d~I~~s-fV~sa---~dv~---~vr~~l~~~~~~~~IiakIEt~~a---------v~nldeI~~~--~DgI~ 261 (510)
+-+++.|+|.|.+- |+.+. +.++ ++++.+.+. .+++|+ |++.| +...-.++.. +|.|=
T Consensus 132 e~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~--GlpvIi--e~~~G~~~~~d~e~i~~aariA~elGAD~VK 207 (295)
T 3glc_A 132 DDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKV--GMPTMA--VTGVGKDMVRDQRYFSLATRIAAEMGAQIIK 207 (295)
T ss_dssp HHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTT--TCCEEE--EECC----CCSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHc--CCEEEE--ECCCCCccCCCHHHHHHHHHHHHHhCCCEEE
Confidence 34467799887653 44443 2333 334444333 355554 55432 2222233333 47666
Q ss_pred EeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCC-CChHhHHHHHHHHHcCCceEEeccCCCCCCC
Q 010443 262 VARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPR-PTRAEATDVANAVLDGTDCVMLSGESAAGAY 340 (510)
Q Consensus 262 IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~-PtraEv~Dv~~av~~G~D~imLs~Eta~G~y 340 (510)
... +.+. .+++++.| ..||+++.- +. +++.=...+..++..|++++...-....-..
T Consensus 208 t~~-------t~e~----~~~vv~~~---~vPVv~~GG--------~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~d 265 (295)
T 3glc_A 208 TYY-------VEKG----FERIVAGC---PVPIVIAGG--------KKLPEREALEMCWQAIDQGASGVDMGRNIFQSDH 265 (295)
T ss_dssp EEC-------CTTT----HHHHHHTC---SSCEEEECC--------SCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSS
T ss_pred eCC-------CHHH----HHHHHHhC---CCcEEEEEC--------CCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcC
Confidence 542 1122 24444444 689887532 22 2233335567889999999999777777779
Q ss_pred HHHHHHHHHHHHHH
Q 010443 341 PEIAVKIMRRICIE 354 (510)
Q Consensus 341 P~~~V~~m~~i~~~ 354 (510)
|.+.++.+..++++
T Consensus 266 p~~~~~al~~ivh~ 279 (295)
T 3glc_A 266 PVAMMKAVQAVVHH 279 (295)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998875
No 198
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=52.19 E-value=37 Score=33.42 Aligned_cols=123 Identities=10% Similarity=0.035 Sum_probs=69.6
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChH-hHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhccc
Q 010443 281 KMMIYKCNLVGKPVVTATQMLESMIKSPRPTRA-EATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSL 359 (510)
Q Consensus 281 k~ii~~~~~~gkpvivaTqmLeSM~~~~~Ptra-Ev~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~ 359 (510)
.-+..+|+..|.|+.+.. |..+ ....+...-..|++.+....+... .++.++.+...++.++-...+
T Consensus 85 ~alA~~a~~~G~~~~iv~-----------p~~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~l~~~~~~~~ 152 (325)
T 1j0a_A 85 FVTGLAAKKLGLDAILVL-----------RGKEELKGNYLLDKIMGIETRVYDAKDSF-ELMKYAEEIAEELKREGRKPY 152 (325)
T ss_dssp HHHHHHHHHTTCEEEEEE-----------ESCCCSCHHHHHHHHTTCEEEEESCCSTT-THHHHHHHHHHHHTTSSCCEE
T ss_pred HHHHHHHHHhCCcEEEEE-----------CCCCCCCchHHHHHHCCCEEEEeCcchhh-hhhHHHHHHHHHHHHcCCceE
Confidence 345678999999987631 1111 122344555689998776544321 112345555555443211211
Q ss_pred chHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 360 DYRAVFKEMIRSTPLPMSPLESLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
.+...+ ..+. ..+.....+.++.++++ .+.||+..-+|.|+.-+++ .+|...|+++
T Consensus 153 ~~p~~~-------~n~~-~~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigV 214 (325)
T 1j0a_A 153 VIPPGG-------ASPI-GTLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGI 214 (325)
T ss_dssp EECGGG-------CSHH-HHTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred EEcCCC-------CCHH-HHHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEE
Confidence 111000 0110 11222345677777774 7999999999999766665 5699999999
No 199
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=51.81 E-value=23 Score=34.71 Aligned_cols=129 Identities=12% Similarity=0.057 Sum_probs=65.2
Q ss_pred hhcHHHHHhccCcCCCC---EEEEcCC-----------CCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-
Q 010443 192 EKDKEDILRWGVPNNID---MIALSFV-----------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE- 256 (510)
Q Consensus 192 ~~D~~di~~~a~~~g~d---~I~~sfV-----------~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~- 256 (510)
..|.....+.+.+.|+| +|-+.|- .+.+.+.++-+.+++. -+..++.|+=.--..+++.++++.
T Consensus 105 ~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~-~~~Pv~vK~~~~~~~~~~~~~a~~~ 183 (314)
T 2e6f_A 105 VEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLA-YGLPFGVKMPPYFDIAHFDTAAAVL 183 (314)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHH-HCSCEEEEECCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHH
Confidence 34444443566677889 8888663 1444333333333221 146789997432112233333432
Q ss_pred -----cCeeEEeCCc---ccCC-------C----------CchhHHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCC
Q 010443 257 -----TDSFMVARGD---LGME-------I----------PVEKIFLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRP 310 (510)
Q Consensus 257 -----~DgI~IgrgD---Lg~e-------~----------~~~~v~~~qk~ii~~~~~~-gkpvivaTqmLeSM~~~~~P 310 (510)
+|+|.+.-.- +.++ + +....+.....+-+..+.. ..|+|....+ -
T Consensus 184 ~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI---------~ 254 (314)
T 2e6f_A 184 NEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGV---------Y 254 (314)
T ss_dssp HTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSC---------C
T ss_pred HhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCC---------C
Confidence 6777654211 0000 0 1112233333333333444 7888875442 2
Q ss_pred ChHhHHHHHHHHHcCCceEEecc
Q 010443 311 TRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 311 traEv~Dv~~av~~G~D~imLs~ 333 (510)
| ..|+..++..|||++++..
T Consensus 255 ~---~~da~~~l~~GAd~V~ig~ 274 (314)
T 2e6f_A 255 S---GEDAFLHILAGASMVQVGT 274 (314)
T ss_dssp S---HHHHHHHHHHTCSSEEECH
T ss_pred C---HHHHHHHHHcCCCEEEEch
Confidence 2 3466777888999999974
No 200
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=51.70 E-value=53 Score=32.02 Aligned_cols=94 Identities=13% Similarity=0.176 Sum_probs=57.9
Q ss_pred hccCcCCCCEEEEcCCC------CHHHHHHHHH-HhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCCccc
Q 010443 200 RWGVPNNIDMIALSFVR------KGSDLVNVRK-VLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDLG 268 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~------sa~dv~~vr~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~IgrgDLg 268 (510)
++.++.|+|++++.-.. |.++=.++-+ ..+..+.++.+|+-+= |.++++......+. +|++|+-+-.+.
T Consensus 29 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 108 (291)
T 3tak_A 29 EWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYN 108 (291)
T ss_dssp HHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred HHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 67889999998764332 2333333333 3333445788998883 56666666555554 799998865443
Q ss_pred CCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 269 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 269 ~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
..+.+.+...-+.| |.+.+.|+++.
T Consensus 109 -~~~~~~l~~~f~~i---a~a~~lPiilY 133 (291)
T 3tak_A 109 -KPTQEGLYQHYKAI---AEAVELPLILY 133 (291)
T ss_dssp -CCCHHHHHHHHHHH---HHHCCSCEEEE
T ss_pred -CCCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 22344555555555 44558999875
No 201
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=51.67 E-value=22 Score=37.04 Aligned_cols=99 Identities=12% Similarity=0.079 Sum_probs=59.6
Q ss_pred CCCChhcHHHHHhccCcCCCCEEEEcCCCC---------------------H---HHHHHHHHHhccCCCCceEEEE--e
Q 010443 188 PTLTEKDKEDILRWGVPNNIDMIALSFVRK---------------------G---SDLVNVRKVLGPHAKNIQLMSK--V 241 (510)
Q Consensus 188 p~lt~~D~~di~~~a~~~g~d~I~~sfV~s---------------------a---~dv~~vr~~l~~~~~~~~Iiak--I 241 (510)
|.+++.|..++.+.+.+.|+|+|.++.-.. + +-+.++++.+ +.++.||+- |
T Consensus 278 pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v---~~~iPIIg~GGI 354 (415)
T 3i65_A 278 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYT---NKQIPIIASGGI 354 (415)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHT---TTCSCEEECSSC
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHh---CCCCCEEEECCC
Confidence 567777778887788899999999986321 1 2334444433 345677764 5
Q ss_pred cCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCC
Q 010443 242 ENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKP 293 (510)
Q Consensus 242 Et~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkp 293 (510)
.|.+-+ .+-|..-+|+++|||+=+.- |..-+..+.+.+-....+.|..
T Consensus 355 ~s~eDa--~e~l~aGAd~VqIgra~l~~--GP~~~~~i~~~L~~~l~~~G~~ 402 (415)
T 3i65_A 355 FSGLDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGYY 402 (415)
T ss_dssp CSHHHH--HHHHHHTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHTTCS
T ss_pred CCHHHH--HHHHHcCCCEEEEcHHHHhc--CHHHHHHHHHHHHHHHHHcCCC
Confidence 554433 23333348999999975521 2334445556665556666643
No 202
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=51.62 E-value=66 Score=31.59 Aligned_cols=97 Identities=12% Similarity=0.157 Sum_probs=60.5
Q ss_pred HHHhccCcCCCCEEEEc------CCCCHHHHHHHHH-HhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCC
Q 010443 197 DILRWGVPNNIDMIALS------FVRKGSDLVNVRK-VLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARG 265 (510)
Q Consensus 197 di~~~a~~~g~d~I~~s------fV~sa~dv~~vr~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~Igrg 265 (510)
.+.++.++.|+|+|++. +.-|.++=.++-+ ..+..+.++++|+-+= |.++++....-.+. +||+|+-+-
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P 120 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTP 120 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 33378889999999863 3344444444433 3434455788999984 47777766665554 799998765
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 266 DLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 266 DLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.+.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 121 ~y~~-~~~~~l~~~f~~i---a~a~~lPiilY 148 (304)
T 3cpr_A 121 YYSK-PSQEGLLAHFGAI---AAATEVPICLY 148 (304)
T ss_dssp CSSC-CCHHHHHHHHHHH---HHHCCSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 4422 2334554444555 45568999874
No 203
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=51.57 E-value=48 Score=32.93 Aligned_cols=95 Identities=9% Similarity=0.046 Sum_probs=57.6
Q ss_pred hccCcCCCCEEEEcC------CCCHHHHHHH-HHHhccCCCCceEEEEe---cCHHHHhchHHHHhh-cCeeEEeCCc-c
Q 010443 200 RWGVPNNIDMIALSF------VRKGSDLVNV-RKVLGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARGD-L 267 (510)
Q Consensus 200 ~~a~~~g~d~I~~sf------V~sa~dv~~v-r~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-~DgI~IgrgD-L 267 (510)
++.++.|+|+|++.- .=|.++=.++ +..++..+.++.||+-+ -|.++++......+. +||+++-+-. +
T Consensus 39 ~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 118 (318)
T 3qfe_A 39 AYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYF 118 (318)
T ss_dssp HHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC-
T ss_pred HHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 688899999988642 1233333333 33344445678899988 456666666655554 7999997653 3
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 268 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 268 g~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.-....+.+...-+.|. .+.+.|+++.
T Consensus 119 ~kp~~~~~l~~~f~~ia---~a~~lPiilY 145 (318)
T 3qfe_A 119 GKATTPPVIKSFFDDVS---CQSPLPVVIY 145 (318)
T ss_dssp --CCCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred CCCCCHHHHHHHHHHHH---hhCCCCEEEE
Confidence 22233445555555554 4558999874
No 204
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=51.48 E-value=41 Score=33.02 Aligned_cols=94 Identities=12% Similarity=0.168 Sum_probs=58.6
Q ss_pred hccCcCCCCEEEEc------CCCCHHHHHHHHH-HhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCCccc
Q 010443 200 RWGVPNNIDMIALS------FVRKGSDLVNVRK-VLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDLG 268 (510)
Q Consensus 200 ~~a~~~g~d~I~~s------fV~sa~dv~~vr~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~IgrgDLg 268 (510)
++.++.|+|+|++. +.-|.++=.++-+ ..+..+.++.+|+-+= |.++++......+. +|++|+-+-.+.
T Consensus 28 ~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 107 (297)
T 2rfg_A 28 DWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYN 107 (297)
T ss_dssp HHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTT
T ss_pred HHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 77889999999863 2334444444433 3333445788999884 47777766665554 799999765442
Q ss_pred CCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 269 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 269 ~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
- .+.+.+...-+.| |.+.+.|+++.
T Consensus 108 ~-~s~~~l~~~f~~v---a~a~~lPiilY 132 (297)
T 2rfg_A 108 R-PSQEGLYQHFKMV---HDAIDIPIIVY 132 (297)
T ss_dssp C-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred C-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 2 2334555444555 44558898874
No 205
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=51.31 E-value=49 Score=31.22 Aligned_cols=126 Identities=11% Similarity=0.089 Sum_probs=56.7
Q ss_pred HHHhccCcCCCCEEEEcCCCCHH--HHHHHHHHhccCC--CCceEEEE-----------ecCHH--------HHhchHHH
Q 010443 197 DILRWGVPNNIDMIALSFVRKGS--DLVNVRKVLGPHA--KNIQLMSK-----------VENQE--------GVVNFDDI 253 (510)
Q Consensus 197 di~~~a~~~g~d~I~~sfV~sa~--dv~~vr~~l~~~~--~~~~Iiak-----------IEt~~--------av~nldeI 253 (510)
++ +.+++.|+|+|.+.-.---. +...+++++...+ .+ .++.- +++.. ..+-+..+
T Consensus 88 ~i-~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~-~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~ 165 (266)
T 2w6r_A 88 HF-LEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQ-AVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEV 165 (266)
T ss_dssp HH-HHHHHHTCSEEECCCCC------CHHHHHHCC----CCC-EEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred HH-HHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCC-EEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHH
Confidence 44 44566799999887432111 5566666665544 21 22222 22211 12223333
Q ss_pred Hhh-cCeeEEeC-CcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEe
Q 010443 254 LRE-TDSFMVAR-GDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 331 (510)
Q Consensus 254 ~~~-~DgI~Igr-gDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imL 331 (510)
.+. ++.|++.. .-=|...+. .+ ..+-+.+...+.|++...- .=+.. |+..+...|+|++++
T Consensus 166 ~~~G~~~i~~t~~~~~g~~~g~-~~----~~i~~l~~~~~ipvia~GG---------I~~~e---d~~~~~~~Gadgv~v 228 (266)
T 2w6r_A 166 EKRGAGEILLTSIDRDGTKSGY-DT----EMIRFVRPLTTLPIIASGG---------AGKME---HFLEAFLAGADAALA 228 (266)
T ss_dssp HHTTCSEEEEEETTTTTTCSCC-CH----HHHHHHGGGCCSCEEEESC---------CCSHH---HHHHHHHHTCSEEEE
T ss_pred HHcCCCEEEEEeecCCCCcCCC-CH----HHHHHHHHHcCCCEEEeCC---------CCCHH---HHHHHHHcCCHHHHc
Confidence 333 57777642 111122222 11 1111223345889887433 33444 455555679999999
Q ss_pred ccCCCCCCCH
Q 010443 332 SGESAAGAYP 341 (510)
Q Consensus 332 s~Eta~G~yP 341 (510)
..---.+.++
T Consensus 229 gsal~~~~~~ 238 (266)
T 2w6r_A 229 ASVFHFREID 238 (266)
T ss_dssp STTTC-----
T ss_pred cHHHHcCCCC
Confidence 7544444433
No 206
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=51.18 E-value=32 Score=28.49 Aligned_cols=41 Identities=34% Similarity=0.484 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHHhhCCCCcEEEE
Q 010443 382 LASSAVRTANKARAKLIVVLTRG---------GTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 382 ia~~av~~A~~~~a~aIvv~T~s---------G~tA~~iSr~RP~~PIiav 423 (510)
.+...++.|.+.+++.||+-++. |.++..+.+.- +|||+.+
T Consensus 87 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~-~~pVlvv 136 (137)
T 2z08_A 87 PAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEA-PCPVLLV 136 (137)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHC-SSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcC-CCCEEEe
Confidence 45566788999999999998763 67888888874 5999987
No 207
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=51.11 E-value=22 Score=34.11 Aligned_cols=52 Identities=6% Similarity=0.030 Sum_probs=36.3
Q ss_pred CCHHHHHHHH-HhCCCeEEEeecCC-------CHHHHHHHHHHHHHHHHhcCCcEEEEecCC
Q 010443 33 RSVPMLEKLL-RAGMNVARFNFSHG-------THEYQQETLNNLRAAMHNTQILCAVMLDTK 86 (510)
Q Consensus 33 ~~~~~l~~li-~~G~~~~RiN~sh~-------~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 86 (510)
.+.+.++.|. +.|+|++|+-++.. +++...+.++.+=+.+.+.|. .+++|+-
T Consensus 39 ~~~~d~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi--~vild~h 98 (291)
T 1egz_A 39 YTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIANDM--YAIIGWH 98 (291)
T ss_dssp CSHHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTTC--EEEEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHCCC--EEEEEcC
Confidence 4678999998 79999999988753 233445555555556667775 4666764
No 208
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=50.94 E-value=88 Score=29.21 Aligned_cols=103 Identities=17% Similarity=0.088 Sum_probs=55.8
Q ss_pred hhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEE-Ee---------------cCHHHHhchHHHHh
Q 010443 192 EKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMS-KV---------------ENQEGVVNFDDILR 255 (510)
Q Consensus 192 ~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~Iia-kI---------------Et~~av~nldeI~~ 255 (510)
+.+.++..+.+.+.|+|+|=+.+- ...+++++++.+++.|-.+..+. -. +..++++.+...++
T Consensus 22 ~~~~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~ 100 (269)
T 3ngf_A 22 EVPFLERFRLAAEAGFGGVEFLFP-YDFDADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALH 100 (269)
T ss_dssp TSCHHHHHHHHHHTTCSEEECSCC-TTSCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCEEEecCC-ccCCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHH
Confidence 344444447788999999988653 34568888888887653332221 00 00134444444444
Q ss_pred h-----cCeeEEeCCcccCCCC----chhHHHHHHHHHHHHHHcCCCeEE
Q 010443 256 E-----TDSFMVARGDLGMEIP----VEKIFLAQKMMIYKCNLVGKPVVT 296 (510)
Q Consensus 256 ~-----~DgI~IgrgDLg~e~~----~~~v~~~qk~ii~~~~~~gkpviv 296 (510)
. ++.|.+..| ..-..+ ++.+...-+++...|.++|..+.+
T Consensus 101 ~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 149 (269)
T 3ngf_A 101 YALALDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLV 149 (269)
T ss_dssp HHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 3 356666555 222222 234444445666666666765443
No 209
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=50.93 E-value=1.8e+02 Score=28.22 Aligned_cols=80 Identities=18% Similarity=0.204 Sum_probs=53.5
Q ss_pred cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCC
Q 010443 257 TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESA 336 (510)
Q Consensus 257 ~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta 336 (510)
+|.+|.-....|.-.|+.+ +..-+.|.+ ..+.|||++.. +-|. +|++.+...|+|++++..=-+
T Consensus 157 ~~aVmPlg~pIGsG~Gi~~-~~lI~~I~e---~~~vPVI~eGG---------I~TP---sDAa~AmeLGAdgVlVgSAI~ 220 (265)
T 1wv2_A 157 CIAVMPLAGLIGSGLGICN-PYNLRIILE---EAKVPVLVDAG---------VGTA---SDAAIAMELGCEAVLMNTAIA 220 (265)
T ss_dssp CSEEEECSSSTTCCCCCSC-HHHHHHHHH---HCSSCBEEESC---------CCSH---HHHHHHHHHTCSEEEESHHHH
T ss_pred CCEEEeCCccCCCCCCcCC-HHHHHHHHh---cCCCCEEEeCC---------CCCH---HHHHHHHHcCCCEEEEChHHh
Confidence 5777763334455555545 333355544 46899998543 3333 577889999999999986666
Q ss_pred CCCCHHHHHHHHHHHH
Q 010443 337 AGAYPEIAVKIMRRIC 352 (510)
Q Consensus 337 ~G~yP~~~V~~m~~i~ 352 (510)
.++.|.+-.+.|..-+
T Consensus 221 ~a~dP~~ma~af~~Av 236 (265)
T 1wv2_A 221 HAKDPVMMAEAMKHAI 236 (265)
T ss_dssp TSSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 7889987777766654
No 210
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=50.89 E-value=50 Score=33.19 Aligned_cols=73 Identities=12% Similarity=0.155 Sum_probs=46.9
Q ss_pred ccccccccCCCCCCCCCeEEEEecCCCCCCHH----HHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEE
Q 010443 5 DIEGLLRDVPNDKRLPKTKIVCTLGPASRSVP----MLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCA 80 (510)
Q Consensus 5 ~~~~~~~~~p~~~~~~~tkIi~TiGp~~~~~~----~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~ 80 (510)
-+-++|+.. ..+....+|.|....+++ ..+++.+.|.+.+.|++.|++.++-.++++.+|++. |.-+.
T Consensus 122 Pl~~llGg~-----~~~v~~y~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---G~d~~ 193 (371)
T 2ovl_A 122 PLWKLFGGY-----DPVVPVYAGGIDLELPVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHL---GDSFP 193 (371)
T ss_dssp BHHHHTTCC-----CSEEEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHH---CTTSC
T ss_pred cHHHHhCCC-----CCCeeEEEeCCCcCCCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHh---CCCCe
Confidence 345566643 124555666553222443 445678899999999999998888778888888765 32234
Q ss_pred EEecC
Q 010443 81 VMLDT 85 (510)
Q Consensus 81 i~~Dl 85 (510)
|++|.
T Consensus 194 l~vDa 198 (371)
T 2ovl_A 194 LMVDA 198 (371)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 45554
No 211
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=50.86 E-value=1.5e+02 Score=29.21 Aligned_cols=115 Identities=13% Similarity=0.179 Sum_probs=69.0
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.++.+- .|.......+...-..|++.+...+ . ..++.+...++.++- ..++.
T Consensus 102 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~-----~-~~~~~~~a~~l~~~~-~~~~~ 163 (342)
T 2gn0_A 102 GVSLSCAMLGIDGKVV-----------MPKGAPKSKVAATCDYSAEVVLHGD-----N-FNDTIAKVSEIVETE-GRIFI 163 (342)
T ss_dssp HHHHHHHHHTCCEEEE-----------ECTTSCHHHHHHHHHHSCEEEECCS-----S-HHHHHHHHHHHHHHH-CCEEC
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECC-----C-HHHHHHHHHHHHHhc-CCEEe
Confidence 4567788999998763 1322333455556667998765432 2 346666666655442 21110
Q ss_pred HHHHHHHHhcCCCCCCchHHHHHHHHHHHHhc-CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPLESLASSAVRTANKA-RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~-~a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
. .| ..| .....-...+.++.+++ +.+.||+.+-+|.++.-+++ ..|...|+++
T Consensus 164 ~-~~-------~n~-~~~~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigv 221 (342)
T 2gn0_A 164 P-PY-------DDP-KVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGV 221 (342)
T ss_dssp C-SS-------SSH-HHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred C-CC-------CCH-HHHHHHHHHHHHHHHHcCCCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEE
Confidence 0 00 001 01122333466777776 47999999999999766655 5799999999
No 212
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=50.66 E-value=25 Score=34.21 Aligned_cols=113 Identities=13% Similarity=0.088 Sum_probs=63.0
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeC---CcccCCCCchhH
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVAR---GDLGMEIPVEKI 276 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~Igr---gDLg~e~~~~~v 276 (510)
+.+.+.|+|++++|=+-. +++.++.+.+++.|- ..+..+--....+.+++|++.+.|++..- |--|..-+ +
T Consensus 113 ~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~gl--~~i~liap~s~~eri~~ia~~~~gfiy~vs~~G~TG~~~~---~ 186 (271)
T 1ujp_A 113 GLFKQAGATGVILPDLPP-DEDPGLVRLAQEIGL--ETVFLLAPTSTDARIATVVRHATGFVYAVSVTGVTGMRER---L 186 (271)
T ss_dssp HHHHHHTCCEEECTTCCG-GGCHHHHHHHHHHTC--EEECEECTTCCHHHHHHHHTTCCSCEEEECC-------------
T ss_pred HHHHHcCCCEEEecCCCH-HHHHHHHHHHHHcCC--ceEEEeCCCCCHHHHHHHHHhCCCCEEEEecCcccCCCCC---C
Confidence 445678999999997653 667777777776553 23333332234568899999887655331 11122211 1
Q ss_pred HHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 277 FLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 277 ~~~qk~ii~~~~~~-gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
+.-....++..+++ +.|+++... .=|.+.+ .. + .|+|+++..
T Consensus 187 ~~~~~~~v~~vr~~~~~Pv~vGfG---------I~t~e~a---~~-~-~~ADgVIVG 229 (271)
T 1ujp_A 187 PEEVKDLVRRIKARTALPVAVGFG---------VSGKATA---AQ-A-AVADGVVVG 229 (271)
T ss_dssp --CCHHHHHHHHTTCCSCEEEESC---------CCSHHHH---HH-H-TTSSEEEEC
T ss_pred CccHHHHHHHHHhhcCCCEEEEcC---------CCCHHHH---HH-h-cCCCEEEEC
Confidence 11113344555554 789987543 3334433 33 3 799999985
No 213
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=50.51 E-value=53 Score=32.85 Aligned_cols=99 Identities=10% Similarity=0.084 Sum_probs=61.0
Q ss_pred HHHHHhccCcCCCCEEEEc------CCCCHHHHHHH-HHHhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEe
Q 010443 195 KEDILRWGVPNNIDMIALS------FVRKGSDLVNV-RKVLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVA 263 (510)
Q Consensus 195 ~~di~~~a~~~g~d~I~~s------fV~sa~dv~~v-r~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~Ig 263 (510)
.+.+.++.++.|+|+|++. +.-|.++=.++ +..++..+.++.||+-+= |.++++....-.+. +||+++.
T Consensus 57 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~ 136 (332)
T 2r8w_A 57 FSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLA 136 (332)
T ss_dssp HHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 3333378889999999863 23344444444 333434455788999884 47777766665554 7999997
Q ss_pred CCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 264 RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 264 rgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
+-.+.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 137 ~P~Y~~-~s~~~l~~~f~~V---A~a~~lPiilY 166 (332)
T 2r8w_A 137 PVSYTP-LTQEEAYHHFAAV---AGATALPLAIY 166 (332)
T ss_dssp CCCSSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 654422 2344555555555 44568998874
No 214
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=50.44 E-value=69 Score=31.61 Aligned_cols=95 Identities=11% Similarity=0.016 Sum_probs=58.3
Q ss_pred HHHhccCcCCCCEEEEc------CCCCHHHHHH-HHHHhccCCCCceEEEEe---cCHHHHhchHHHHhh-cCeeEEeCC
Q 010443 197 DILRWGVPNNIDMIALS------FVRKGSDLVN-VRKVLGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARG 265 (510)
Q Consensus 197 di~~~a~~~g~d~I~~s------fV~sa~dv~~-vr~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-~DgI~Igrg 265 (510)
.+.++.++.|+|+|++. +.=|.++=.+ ++..++.. .++.||+-+ -|.++++......+. +|++|+-+-
T Consensus 33 ~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 111 (313)
T 3dz1_A 33 RLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPP 111 (313)
T ss_dssp HHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 33378889999999873 2223333333 34444445 578899988 456666666555554 799999765
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHcC--CCeEEe
Q 010443 266 DLGMEIPVEKIFLAQKMMIYKCNLVG--KPVVTA 297 (510)
Q Consensus 266 DLg~e~~~~~v~~~qk~ii~~~~~~g--kpviva 297 (510)
.. -.+.+.+...-+.| |.+.+ .|+++.
T Consensus 112 ~~--~~s~~~l~~~f~~v---a~a~~~~lPiilY 140 (313)
T 3dz1_A 112 PS--LRTDEQITTYFRQA---TEAIGDDVPWVLQ 140 (313)
T ss_dssp TT--CCSHHHHHHHHHHH---HHHHCTTSCEEEE
T ss_pred CC--CCCHHHHHHHHHHH---HHhCCCCCcEEEE
Confidence 42 23344555544555 44456 898874
No 215
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=50.31 E-value=1.3e+02 Score=30.28 Aligned_cols=116 Identities=16% Similarity=0.207 Sum_probs=68.4
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.++.+- .|..+....+...-..|++.+...+ . ..++.+...++..+.+..++-
T Consensus 107 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~-----~-~~~a~~~a~~l~~~~~~~~~v 169 (372)
T 1p5j_A 107 AAAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATCKVVGE-----L-LDEAFELAKALAKNNPGWVYI 169 (372)
T ss_dssp HHHHHHHHHTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECCS-----C-HHHHHHHHHHHHHHSTTEEEC
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHhcCCEEEEECC-----C-HHHHHHHHHHHHHhcCCcEEe
Confidence 3566789999998763 2333333445556667998775432 2 345666666655442222110
Q ss_pred HHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hC-CCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPLESLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAK----YR-PAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a~aIvv~T~sG~tA~~iSr----~R-P~~PIiav 423 (510)
. .| ..| .....-...+.++.++++ .+.||+.+-+|.++.-+++ +. |...|+++
T Consensus 170 ~-~~-------~n~-~~~~G~~t~~~Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigV 229 (372)
T 1p5j_A 170 P-PF-------DDP-LIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAM 229 (372)
T ss_dssp C-SS-------CCH-HHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEE
T ss_pred C-CC-------CCH-HHHhhHHHHHHHHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEE
Confidence 0 00 000 011222345567777774 6899999999999776664 33 88999999
No 216
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=50.07 E-value=1.5e+02 Score=26.93 Aligned_cols=114 Identities=11% Similarity=0.120 Sum_probs=67.0
Q ss_pred ChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCH---------HHHhchHHHHhh-cCee
Q 010443 191 TEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQ---------EGVVNFDDILRE-TDSF 260 (510)
Q Consensus 191 t~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~---------~av~nldeI~~~-~DgI 260 (510)
...+...+.+.+.+.|++++.+ .+.+.++++++... ..++..+-+. .-.+.++..++. +|.+
T Consensus 21 ~~~~~~~~a~~~~~~Ga~~i~~---~~~~~i~~i~~~~~-----~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v 92 (223)
T 1y0e_A 21 SSFIMSKMALAAYEGGAVGIRA---NTKEDILAIKETVD-----LPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVI 92 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEE---ESHHHHHHHHHHCC-----SCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEE
T ss_pred CCccHHHHHHHHHHCCCeeecc---CCHHHHHHHHHhcC-----CCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEE
Confidence 3345555545667889999875 58888998888652 3333211110 012334444444 7999
Q ss_pred EEeCCcccCCCCchhHHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 261 MVARGDLGMEIPVEKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 261 ~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~--gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
.++-.++.- |.+.+ .++++.+++. |+++++-. -|..| ...+...|+|.++.+
T Consensus 93 ~l~~~~~~~--p~~~~----~~~i~~~~~~~~~~~v~~~~-----------~t~~e---~~~~~~~G~d~i~~~ 146 (223)
T 1y0e_A 93 ALDATLQQR--PKETL----DELVSYIRTHAPNVEIMADI-----------ATVEE---AKNAARLGFDYIGTT 146 (223)
T ss_dssp EEECSCSCC--SSSCH----HHHHHHHHHHCTTSEEEEEC-----------SSHHH---HHHHHHTTCSEEECT
T ss_pred EEeeecccC--cccCH----HHHHHHHHHhCCCceEEecC-----------CCHHH---HHHHHHcCCCEEEeC
Confidence 887544311 10122 4677777877 88876521 23333 445788999999875
No 217
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=49.95 E-value=49 Score=32.31 Aligned_cols=94 Identities=10% Similarity=0.110 Sum_probs=57.6
Q ss_pred hccCcCCCCEEEEc------CCCCHHHHHHH-HHHhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCCccc
Q 010443 200 RWGVPNNIDMIALS------FVRKGSDLVNV-RKVLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDLG 268 (510)
Q Consensus 200 ~~a~~~g~d~I~~s------fV~sa~dv~~v-r~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~IgrgDLg 268 (510)
++.++.|+|++++. +.-|.++=.++ +...+..+.++.+|+-+= |.++++....-.+. +|++|+-+-.+.
T Consensus 28 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 107 (292)
T 2vc6_A 28 EWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYN 107 (292)
T ss_dssp HHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCC
Confidence 77889999999853 23344444443 333434445788988884 46777666665554 799998765442
Q ss_pred CCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 269 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 269 ~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
- .+.+.+...-+.| |.+.+.|+++.
T Consensus 108 ~-~s~~~l~~~f~~i---a~a~~lPiilY 132 (292)
T 2vc6_A 108 K-PTQEGIYQHFKAI---DAASTIPIIVY 132 (292)
T ss_dssp C-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred C-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 2 2334444444444 45568999873
No 218
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=49.85 E-value=76 Score=29.88 Aligned_cols=118 Identities=14% Similarity=0.111 Sum_probs=66.9
Q ss_pred CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCC----CCHHHHHHHHHHHHHHHhcccchHHHHH
Q 010443 291 GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAG----AYPEIAVKIMRRICIEAESSLDYRAVFK 366 (510)
Q Consensus 291 gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G----~yP~~~V~~m~~i~~~aE~~~~~~~~~~ 366 (510)
|.++.++|-. +--....++..-+.++..|+.+|||.|-.--- +| ..--+..+-+..+++.+.... -+..++
T Consensus 52 ~~~v~v~~vi--gFP~G~~~~~~k~~e~~~Ai~~GAdevd~vin--ig~~~~g~~~~v~~ei~~v~~a~~~~~-lkvIle 126 (220)
T 1ub3_A 52 HAPFRLVTVV--GFPLGYQEKEVKALEAALACARGADEVDMVLH--LGRAKAGDLDYLEAEVRAVREAVPQAV-LKVILE 126 (220)
T ss_dssp TCSSEEEEEE--STTTCCSCHHHHHHHHHHHHHTTCSEEEEECC--HHHHHTTCHHHHHHHHHHHHHHSTTSE-EEEECC
T ss_pred CCCceEEEEe--cCCCCCCchHHHHHHHHHHHHcCCCEEEeccc--chhhhCCCHHHHHHHHHHHHHHHcCCC-ceEEEe
Confidence 4455555543 22233456666779999999999999855321 22 233556677777776665421 000000
Q ss_pred HHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCchH--------HHHHHh-hCCCCcEEEE
Q 010443 367 EMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTT--------AKLVAK-YRPAVPILSV 423 (510)
Q Consensus 367 ~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~T~sG~t--------A~~iSr-~RP~~PIiav 423 (510)
. ...+ +.--..|+++|.+.+|+ +|=|.+|.+ .+++.+ -.+++||.+-
T Consensus 127 -----t-~~l~--~e~i~~a~~ia~eaGAD--fVKTsTGf~~~gat~~dv~~m~~~vg~~v~Vkaa 182 (220)
T 1ub3_A 127 -----T-GYFS--PEEIARLAEAAIRGGAD--FLKTSTGFGPRGASLEDVALLVRVAQGRAQVKAA 182 (220)
T ss_dssp -----G-GGSC--HHHHHHHHHHHHHHTCS--EEECCCSSSSCCCCHHHHHHHHHHHTTSSEEEEE
T ss_pred -----c-CCCC--HHHHHHHHHHHHHhCCC--EEEeCCCCCCCCCCHHHHHHHHHhhCCCCeEEEE
Confidence 0 0012 23355788999999999 555555543 233332 2567888887
No 219
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=49.79 E-value=16 Score=39.36 Aligned_cols=52 Identities=21% Similarity=0.282 Sum_probs=43.0
Q ss_pred CCCeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHH
Q 010443 19 LPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRA 70 (510)
Q Consensus 19 ~~~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~ 70 (510)
..|-.+-|.+|-.-+..|-.+.|+++|+|++=|+.+||..+...+.++.+|+
T Consensus 267 ~grL~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~ 318 (556)
T 4af0_A 267 SKQLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQ 318 (556)
T ss_dssp TCCBCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHH
T ss_pred hhceeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHh
Confidence 3445567778866667889999999999999999999999988777777776
No 220
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=49.71 E-value=39 Score=33.50 Aligned_cols=94 Identities=14% Similarity=0.072 Sum_probs=58.4
Q ss_pred hccCcCCCCEEEEcC------CCCHHHHHHHH-HHhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCCccc
Q 010443 200 RWGVPNNIDMIALSF------VRKGSDLVNVR-KVLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDLG 268 (510)
Q Consensus 200 ~~a~~~g~d~I~~sf------V~sa~dv~~vr-~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~IgrgDLg 268 (510)
++.++.|+|+|++.- .=|.++=.++- ..++..+.++.||+-+= |.++++......+. +|++|+-+-.+.
T Consensus 52 ~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 131 (315)
T 3na8_A 52 ERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYW 131 (315)
T ss_dssp HHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 678899999988532 22333433433 33334456788998884 56777766665555 799999865443
Q ss_pred CCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 269 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 269 ~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
- .+.+.+...-+.| |.+.+.|+++.
T Consensus 132 ~-~s~~~l~~~f~~v---a~a~~lPiilY 156 (315)
T 3na8_A 132 K-LNEAEVFQHYRAV---GEAIGVPVMLY 156 (315)
T ss_dssp C-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred C-CCHHHHHHHHHHH---HHhCCCcEEEE
Confidence 2 2344555554555 45557999875
No 221
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=49.45 E-value=92 Score=30.47 Aligned_cols=91 Identities=13% Similarity=0.126 Sum_probs=56.7
Q ss_pred cCeeEEeCCcc--cCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEecc
Q 010443 257 TDSFMVARGDL--GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 333 (510)
Q Consensus 257 ~DgI~IgrgDL--g~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~ 333 (510)
.||+++. |-- +..+..++-..+.+..++.++.+..|+++-| ...+-+|..+.+. |-..|+|++|+..
T Consensus 42 v~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 42 IDAVVPV-GTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---------GSNATHEAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp CCEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC---------CCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 6999885 211 1234445544444555554443357887643 2455566666555 6678999999975
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhc
Q 010443 334 ESAAGAYPEIAVKIMRRICIEAES 357 (510)
Q Consensus 334 Eta~G~yP~~~V~~m~~i~~~aE~ 357 (510)
=--...-+.+.++..+.|+..+.-
T Consensus 112 P~y~~~s~~~l~~~f~~va~a~~l 135 (301)
T 3m5v_A 112 PYYNKPTQQGLYEHYKAIAQSVDI 135 (301)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCC
Confidence 443333467788889999888754
No 222
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=49.44 E-value=55 Score=29.60 Aligned_cols=59 Identities=12% Similarity=0.246 Sum_probs=40.0
Q ss_pred EecCCCEEEEEec----CCCCCCccEEecCCCCccc--cCCCCCEEEEe--CCeEEEEEEEEeCCCCeE
Q 010443 102 QLKEGQEITVSTD----YDFKGNEEMITMSYKKLPV--DVKPGNTILCA--DGTITLTVLSCDPKSGTV 162 (510)
Q Consensus 102 ~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~~--~v~~gd~i~id--DG~i~l~V~~~~~~~~~i 162 (510)
-.+.|++..|+.. |...+......++-..|.. .+++|+.+.+. +|.+..+|++++ ++.+
T Consensus 51 Gm~~Ge~~~v~ippe~aYG~~~~~~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~--~~~V 117 (171)
T 2k8i_A 51 GHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVE--DDHV 117 (171)
T ss_dssp TCCTTCEEEEEEETTTSSCCCCTTSEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEEC--SSEE
T ss_pred CCCCCCEEEEEECcHHhcCCCChhhEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEEEc--CCEE
Confidence 4678999988876 2223444455566555543 58999999997 577777889884 4444
No 223
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=49.41 E-value=2e+02 Score=31.18 Aligned_cols=151 Identities=17% Similarity=0.252 Sum_probs=89.6
Q ss_pred cEEecCCCCccccCCCCCEEEE--eCCeEEEEEEEEeCCCCeEEEEEeeCeEecCCCCcccCCcc---------------
Q 010443 122 EMITMSYKKLPVDVKPGNTILC--ADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVV--------------- 184 (510)
Q Consensus 122 ~~i~v~~~~~~~~v~~gd~i~i--dDG~i~l~V~~~~~~~~~i~~~v~~~G~l~s~K~vnlp~~~--------------- 184 (510)
+.|++|.-.+--. .+-+ +++.+.++|+. +..+. .+-|.--++..+++|...
T Consensus 120 ~~ilidDG~i~l~-----V~~~~~~~~~i~~~v~~----gg~l~---~~KgvnlPg~~~~lp~ltekD~~di~~~l~~g~ 187 (587)
T 2e28_A 120 AKILLDDGLISLE-----VNAVDKQAGEIVTTVLN----GGVLK---NKKGVNVPGVKVNLPGITEKDRADILFGIRQGI 187 (587)
T ss_dssp CEEEETTTTEEEE-----EEEEETTTTEEEEECCS----CCCBC---SSCBEECTTSCCCCCSCCHHHHHHHHHHHHHTC
T ss_pred CEEEEeCCEEEEE-----EEEEecCCCeEEEEEec----CCEEc---CCceeecCCCcCCCCCCCcccHHHHHHHHHcCC
Confidence 4677765443211 1223 45667777652 22222 234666777888887642
Q ss_pred --ccCCC-CChhcHHHHHhccCcCCC-CEEEEcCCCCHHHHHHHHHHhccC-----------------------------
Q 010443 185 --VDLPT-LTEKDKEDILRWGVPNNI-DMIALSFVRKGSDLVNVRKVLGPH----------------------------- 231 (510)
Q Consensus 185 --~~lp~-lt~~D~~di~~~a~~~g~-d~I~~sfV~sa~dv~~vr~~l~~~----------------------------- 231 (510)
+-+|. =+..|.+.++++..+.|. +..+++++++++-++.+.+++...
T Consensus 188 d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~DgImVargDLgvei~~~~v~~~qk~ii~~ 267 (587)
T 2e28_A 188 DFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAADGLMVARGDLGVEIPAEEVPLIQKLLIKK 267 (587)
T ss_dssp SEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHH
T ss_pred CEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhCCEEEEcCchhhhhcCHHHHHHHHHHHHHH
Confidence 12232 277888888555555674 788999999999998887765311
Q ss_pred -C--CCceEEE------EecC-----HHHHhchHHHHhhcCeeEE----eCCcccCCCCchhHHHHHHHHHHHHHH
Q 010443 232 -A--KNIQLMS------KVEN-----QEGVVNFDDILRETDSFMV----ARGDLGMEIPVEKIFLAQKMMIYKCNL 289 (510)
Q Consensus 232 -~--~~~~Iia------kIEt-----~~av~nldeI~~~~DgI~I----grgDLg~e~~~~~v~~~qk~ii~~~~~ 289 (510)
+ ..+.++| +|++ +|.-+=...|+.-+|++|+ +.|++ |. +-...+.+|+..+.+
T Consensus 268 ~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavMLSgETA~G~y----Pv-eaV~~m~~I~~~~E~ 338 (587)
T 2e28_A 268 SNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQY----PV-EAVKTMHQIALRTEQ 338 (587)
T ss_dssp HHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC----HH-HHHHHHHHHHHHHHT
T ss_pred HHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceeeecccccCCCC----HH-HHHHHHHHHHHHHhh
Confidence 0 1233443 4555 3556666778888999998 45544 22 334455666666654
No 224
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=49.28 E-value=63 Score=33.61 Aligned_cols=119 Identities=13% Similarity=0.143 Sum_probs=70.7
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.++.+- .|..+....+...-..|++.+....+. . -.++++...+++++-+..++-
T Consensus 189 AlA~aAa~~Gl~~~Iv-----------mP~~~s~~k~~~~r~~GAeVv~v~~~~---~-~~~a~~~a~el~~~~~~~~~i 253 (430)
T 4aec_A 189 GLAFIAASRGYRLILT-----------MPASMSMERRVLLKAFGAELVLTDPAK---G-MTGAVQKAEEILKNTPDAYML 253 (430)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHSTTEEEC
T ss_pred HHHHHHHHhCCEEEEE-----------EcCCCCHHHHHHHHHCCCEEEEECCCC---C-hHHHHHHHHHHHHhcCCcEEe
Confidence 4556789999998763 243334455566677899988775331 1 235565555555443222211
Q ss_pred HHHHHHHHhcCCCCCCchHHHHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPLESLASSAVRTANKA--RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~--~a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
. .| ..|..+..--...+.++.+++ ..++||+..-+|.+..-+++ ..|.+.|+++
T Consensus 254 ~-~~-------~np~~~~aG~~T~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigV 313 (430)
T 4aec_A 254 Q-QF-------DNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGV 313 (430)
T ss_dssp C-TT-------TCTHHHHHHHHTHHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred c-CC-------CCccHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEE
Confidence 0 01 011111112233456777776 46899999999998766655 4899999999
No 225
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=49.26 E-value=30 Score=36.56 Aligned_cols=55 Identities=13% Similarity=0.233 Sum_probs=36.8
Q ss_pred CCCHHHHHHHHHhCCCeEEEeecCCC----------HHHHHHHHHHHHHHHHhcCCcEEEEecCCCC
Q 010443 32 SRSVPMLEKLLRAGMNVARFNFSHGT----------HEYQQETLNNLRAAMHNTQILCAVMLDTKGP 88 (510)
Q Consensus 32 ~~~~~~l~~li~~G~~~~RiN~sh~~----------~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 88 (510)
....+.|+.|-+.|+|++||-+++.. .+...+.++.+=+.+.+.| +.+++|+-..
T Consensus 45 ~~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~G--i~vildlH~~ 109 (515)
T 3icg_A 45 MTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND--MYVIINLHHE 109 (515)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEEECCSC
T ss_pred cCCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEecCCC
Confidence 34689999999999999999888532 1222334444444444555 5678888754
No 226
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=49.20 E-value=1.1e+02 Score=28.48 Aligned_cols=37 Identities=14% Similarity=0.064 Sum_probs=26.9
Q ss_pred hccCcCCCCEEEEcCC-------CCHHHHHHHHHHhccCCCCce
Q 010443 200 RWGVPNNIDMIALSFV-------RKGSDLVNVRKVLGPHAKNIQ 236 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV-------~sa~dv~~vr~~l~~~~~~~~ 236 (510)
+.+.+.|+|+|=+... .+.+++.++++.+.+.|-.+.
T Consensus 22 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 65 (286)
T 3dx5_A 22 QFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEIT 65 (286)
T ss_dssp HHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEE
T ss_pred HHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEE
Confidence 7788999999988432 234788888998888764433
No 227
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=49.19 E-value=84 Score=30.75 Aligned_cols=119 Identities=13% Similarity=0.106 Sum_probs=69.1
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+.+|.++++- .|..+....+...-..|++.+...++. . ..++.+...+++.+-...++-
T Consensus 81 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~-~~~~~~~a~~~~~~~~~~~~i 145 (322)
T 1z7w_A 81 GLAFTAAAKGYKLIIT-----------MPASMSTERRIILLAFGVELVLTDPAK---G-MKGAIAKAEEILAKTPNGYML 145 (322)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHCTTEEEC
T ss_pred HHHHHHHHcCCCEEEE-----------eCCCCCHHHHHHHHHcCCEEEEeCCCC---C-HHHHHHHHHHHHHhCCCeEeC
Confidence 3566788999998763 122222344555666899977654321 1 235666666655443222110
Q ss_pred HHHHHHHHhcCCCCCCchHHHHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPLESLASSAVRTANKA--RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~--~a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
. .| ..+..+...-...+.++.+++ +.+.||+.+-+|.+..-+++ ..|...|+++
T Consensus 146 ~-~~-------~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigv 205 (322)
T 1z7w_A 146 Q-QF-------ENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGV 205 (322)
T ss_dssp C-TT-------TCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred C-CC-------CChhHHHHHHHHHHHHHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEE
Confidence 0 00 011111111223456777776 37999999999999766665 4799999999
No 228
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=48.91 E-value=23 Score=36.54 Aligned_cols=78 Identities=17% Similarity=0.147 Sum_probs=44.5
Q ss_pred cccccccccCCCCCCCCCeEEEEecCCCCCCHH----HHHHHHHhCCCeEEEeecCCCH---HHHHHHHHHHHHHHHhcC
Q 010443 4 IDIEGLLRDVPNDKRLPKTKIVCTLGPASRSVP----MLEKLLRAGMNVARFNFSHGTH---EYQQETLNNLRAAMHNTQ 76 (510)
Q Consensus 4 ~~~~~~~~~~p~~~~~~~tkIi~TiGp~~~~~~----~l~~li~~G~~~~RiN~sh~~~---~~~~~~i~~ir~~~~~~~ 76 (510)
.-+.++|++.++ .+...-+|.... .+++ ..+++.+.|.+.+.+++.|+.. .....-++.+|.+.+..|
T Consensus 154 ~Pv~~LLGG~~r----~~v~~y~s~~~~-~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG 228 (412)
T 3stp_A 154 KPVFKLLGGRTK----DRIPVYYSKLYA-GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIG 228 (412)
T ss_dssp CBHHHHHTCCSS----SSEEEEEECCCS-CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHhcCCCCC----ceEEEEEEecCC-CCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcC
Confidence 445567774422 346667775332 2444 4455777899999999999731 223334444444444445
Q ss_pred CcEEEEecCC
Q 010443 77 ILCAVMLDTK 86 (510)
Q Consensus 77 ~~v~i~~Dl~ 86 (510)
.-+.|++|..
T Consensus 229 ~d~~L~vDaN 238 (412)
T 3stp_A 229 YDNDLMLECY 238 (412)
T ss_dssp SSSEEEEECT
T ss_pred CCCeEEEECC
Confidence 4455666643
No 229
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=48.89 E-value=40 Score=33.63 Aligned_cols=119 Identities=13% Similarity=0.123 Sum_probs=69.9
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.++++- .|..+....+...-..|++.+...++. .| .++.+...++..+....+.+
T Consensus 92 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~y~~ 156 (343)
T 2pqm_A 92 ALCQAGAVFGYRVNIA-----------MPSTMSVERQMIMKAFGAELILTEGKK---GM-PGAIEEVNKMIKENPGKYFV 156 (343)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTTEEE
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCCC---CH-HHHHHHHHHHHHhCCCcEEE
Confidence 4667788999998763 233233344556666799987765431 12 35666666655443321011
Q ss_pred HHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPLESLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
...| ..|..+..-....+ ++.++++ .+.||+.+-+|.++.-+++ ..|...|+++
T Consensus 157 ~~~~-------~n~~n~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigV 216 (343)
T 2pqm_A 157 ANQF-------GNPDNTAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAV 216 (343)
T ss_dssp CCTT-------TCHHHHHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCCC-------CChhHHHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEE
Confidence 0000 01100111133445 7777775 6899999999999776664 5799999999
No 230
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=48.18 E-value=58 Score=32.30 Aligned_cols=155 Identities=16% Similarity=0.092 Sum_probs=90.7
Q ss_pred CCCChhcHHHHHhccC-cCCCCEEEEcCCCCHHHHHHHHHHhccCC---CCceEEEEecCHHHHhchHHHHhh-------
Q 010443 188 PTLTEKDKEDILRWGV-PNNIDMIALSFVRKGSDLVNVRKVLGPHA---KNIQLMSKVENQEGVVNFDDILRE------- 256 (510)
Q Consensus 188 p~lt~~D~~di~~~a~-~~g~d~I~~sfV~sa~dv~~vr~~l~~~~---~~~~IiakIEt~~av~nldeI~~~------- 256 (510)
|..|+.|.+.+-+-|. +.++-.|+++ +..+..+++.|...+ .+++|.+=|=-|.|-...+.-+..
T Consensus 37 p~~T~e~I~~lc~eA~~~~~~aaVCV~----P~~V~~a~~~L~~~~~~~s~v~V~tVigFP~G~~~~e~K~~Ea~~Av~~ 112 (297)
T 4eiv_A 37 DGETNESVAAVCKIAAKDPAIVGVSVR----PAFVRFIRQELVKSAPEVAGIKVCAAVNFPEGTGTPDTVSLEAVGALKD 112 (297)
T ss_dssp TTCCHHHHHHHHHHHHSSSCCSEEEEC----GGGHHHHHHTGGGTCGGGGGSEEEEEESTTTCCCCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhhcCcEEEEEC----HHHHHHHHHHhcccCcCCCCCeEEEEecCCCCCCCHHHHHHHHHHHHHc
Confidence 5678888877656677 6788878875 568888899887644 468888878666665444333321
Q ss_pred -cCee--EEeCCcccCC--CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHh-HHHHHH-HHHcCCceE
Q 010443 257 -TDSF--MVARGDLGME--IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAE-ATDVAN-AVLDGTDCV 329 (510)
Q Consensus 257 -~DgI--~IgrgDLg~e--~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraE-v~Dv~~-av~~G~D~i 329 (510)
+|-| +|..|-|--. =.++.+..-.+.+.++|...-..||+-|-.| +..| +..... ++..|+|.|
T Consensus 113 GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~L---------t~~e~i~~A~~ia~~AGADFV 183 (297)
T 4eiv_A 113 GADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGEL---------QGGDIISRAAVAALEGGADFL 183 (297)
T ss_dssp TCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCC---------CCHHHHHHHHHHHHHHTCSEE
T ss_pred CCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccC---------CcHHHHHHHHHHHHHhCCCEE
Confidence 2322 2222222100 0112333344456666632223356655555 3445 333333 677899998
Q ss_pred EeccCCCCCCCHHHHHHHHHHHHHHH
Q 010443 330 MLSGESAAGAYPEIAVKIMRRICIEA 355 (510)
Q Consensus 330 mLs~Eta~G~yP~~~V~~m~~i~~~a 355 (510)
=-|.==..|.--.+.|+.|.+.+++.
T Consensus 184 KTSTGf~~~gAT~edV~lM~~~v~~~ 209 (297)
T 4eiv_A 184 QTSSGLGATHATMFTVHLISIALREY 209 (297)
T ss_dssp ECCCSSSSCCCCHHHHHHHHHHHHHH
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 76633333345689999999998753
No 231
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=48.16 E-value=44 Score=31.70 Aligned_cols=105 Identities=14% Similarity=0.055 Sum_probs=63.9
Q ss_pred CEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCH----HHHhchHHHHhh--cCeeEEeCCcccCCCCchhHHHHHH
Q 010443 208 DMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQ----EGVVNFDDILRE--TDSFMVARGDLGMEIPVEKIFLAQK 281 (510)
Q Consensus 208 d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~----~av~nldeI~~~--~DgI~IgrgDLg~e~~~~~v~~~qk 281 (510)
..++.|| +.+.+..+++.. .++.+ +.+... .++..+-+.+.. ++.+... ...+-+
T Consensus 134 ~v~~~SF--~~~~l~~~~~~~----p~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 194 (250)
T 3ks6_A 134 RTTFSSF--LLASMDELWKAT----TRPRL-WLVSPSVLQQLGPGAVIETAIAHSIHEIGVH------------IDTADA 194 (250)
T ss_dssp GEEEEES--CHHHHHHHHHHC----CSCEE-EEECHHHHHHHHHHHHHHHHHHTTCCEEEEE------------GGGCCH
T ss_pred CEEEEeC--CHHHHHHHHHHC----CCCcE-EEEecccccccchhHHHHHHHhcCCCEEecc------------hhhCCH
Confidence 5677787 677888887754 33443 333321 122222222222 2333322 112346
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHH
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRI 351 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i 351 (510)
..++.|+++|++|.+=|- -+ ..++..++..|+|+|+- .||..+.+.++++
T Consensus 195 ~~v~~~~~~G~~V~~WTv----------n~---~~~~~~l~~~GVDgIiT-------D~P~~~~~~~~~~ 244 (250)
T 3ks6_A 195 GLMAQVQAAGLDFGCWAA----------HT---PSQITKALDLGVKVFTT-------DRPTLAIALRTEH 244 (250)
T ss_dssp HHHHHHHHTTCEEEEECC----------CS---HHHHHHHHHHTCSEEEE-------SCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeC----------CC---HHHHHHHHHcCCCEEEc-------CCHHHHHHHHHHh
Confidence 789999999999988762 12 24556677889999985 5899988887764
No 232
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=47.87 E-value=54 Score=32.31 Aligned_cols=97 Identities=8% Similarity=0.104 Sum_probs=60.1
Q ss_pred HHHhccCcCCCCEEEEc------CCCCHHHHHHHHH-HhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCC
Q 010443 197 DILRWGVPNNIDMIALS------FVRKGSDLVNVRK-VLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARG 265 (510)
Q Consensus 197 di~~~a~~~g~d~I~~s------fV~sa~dv~~vr~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~Igrg 265 (510)
.+.++.++.|+|+|++. +.-|.++=.++-+ ..+..+.++.+|+-+= |.++++....-.+. +|++++-+-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 116 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP 116 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 33377889999999873 3344444444433 3334455788999884 47777766665554 799998755
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 266 DLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 266 DLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.+.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 117 ~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 144 (306)
T 1o5k_A 117 YYNK-PTQEGLYQHYKYI---SERTDLGIVVY 144 (306)
T ss_dssp CSSC-CCHHHHHHHHHHH---HTTCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 4422 2334554444444 45568999874
No 233
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=47.82 E-value=66 Score=31.22 Aligned_cols=90 Identities=19% Similarity=0.266 Sum_probs=52.0
Q ss_pred HHHHHhccCcCCCCEE--EEcC---CCCHHHHHHHH-----------------HHhccCCCCceEEEEec-CH---HHHh
Q 010443 195 KEDILRWGVPNNIDMI--ALSF---VRKGSDLVNVR-----------------KVLGPHAKNIQLMSKVE-NQ---EGVV 248 (510)
Q Consensus 195 ~~di~~~a~~~g~d~I--~~sf---V~sa~dv~~vr-----------------~~l~~~~~~~~IiakIE-t~---~av~ 248 (510)
.+.+ +...+.|+|+| .+|| +-+..-|+..- +.+++.+.++.++.+.- ++ -|++
T Consensus 35 ~~~~-~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e 113 (267)
T 3vnd_A 35 LKII-QTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGID 113 (267)
T ss_dssp HHHH-HHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHH
T ss_pred HHHH-HHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHH
Confidence 3444 55567899974 5667 33333333321 11222224667877765 43 3555
Q ss_pred chHH-HHhh-cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeE
Q 010443 249 NFDD-ILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVV 295 (510)
Q Consensus 249 nlde-I~~~-~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvi 295 (510)
++-+ ..++ +||+++. | +|+++ ..+.+..|+++|...+
T Consensus 114 ~f~~~~~~aGvdgvii~--D----lp~ee----~~~~~~~~~~~gl~~i 152 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIA--D----VPVEE----SAPFSKAAKAHGIAPI 152 (267)
T ss_dssp HHHHHHHHHTCCEEEET--T----SCGGG----CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEEEeC--C----CCHhh----HHHHHHHHHHcCCeEE
Confidence 5533 3333 6999994 4 45544 4577888999998755
No 234
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=47.75 E-value=37 Score=28.91 Aligned_cols=42 Identities=21% Similarity=0.271 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 010443 381 SLASSAVRTANKARAKLIVVLTR---------GGTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 381 ~ia~~av~~A~~~~a~aIvv~T~---------sG~tA~~iSr~RP~~PIiav 423 (510)
..+...++.|.+.+++.||+-++ -|.++..+.+.- +|||+.+
T Consensus 107 ~~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~-~~pVlvv 157 (162)
T 1mjh_A 107 IPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKS-NKPVLVV 157 (162)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHC-CSCEEEE
T ss_pred CHHHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhC-CCCEEEE
Confidence 35566678899999999999886 367888888875 5999999
No 235
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=47.74 E-value=65 Score=31.34 Aligned_cols=118 Identities=15% Similarity=0.100 Sum_probs=66.6
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.++.+-. |.......+...-..|++.+....+. . ..++.+...++..+-.. + +
T Consensus 79 a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~v~~~~~~~---~-~~~~~~~a~~l~~~~~~-~-~ 141 (308)
T 2egu_A 79 GLAMVAAAKGYKAVLVM-----------PDTMSLERRNLLRAYGAELVLTPGAQ---G-MRGAIAKAEELVREHGY-F-M 141 (308)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ESCSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHHCC-B-C
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCCC---C-HHHHHHHHHHHHHHCcC-C-c
Confidence 46677899999987631 22222234455566799987776431 1 24666666666554322 1 1
Q ss_pred HHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPLESLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
...|. .|.....-....+.++.++++ .+.||+.+-+|.++.-+++ ..|...|+++
T Consensus 142 ~~~~~-------n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigv 202 (308)
T 2egu_A 142 PQQFK-------NEANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAV 202 (308)
T ss_dssp C---------------------CHHHHHHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCcCC-------ChhHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEE
Confidence 11121 111111112223455555553 6899999999999766664 4699999999
No 236
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=47.58 E-value=68 Score=32.25 Aligned_cols=116 Identities=16% Similarity=0.208 Sum_probs=68.2
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.++.+- .|..+....+...-..|++.+...+ .| -++.+...+++++-...+ |
T Consensus 107 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~Vv~v~~-----~~-~~a~~~a~~l~~~~~~~~-~ 168 (364)
T 4h27_A 107 AAAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATVKVVGE-----LL-DEAFELAKALAKNNPGWV-Y 168 (364)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHTTTCEEEEECS-----ST-THHHHHHHHHHHHSTTEE-E
T ss_pred HHHHHHHHhCCceEEE-----------ECCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhCCCeE-E
Confidence 4667789999998763 1333333345555668998776642 23 356666666654421211 1
Q ss_pred HHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hC-CCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPLESLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAK----YR-PAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a~aIvv~T~sG~tA~~iSr----~R-P~~PIiav 423 (510)
...| ..| ...+.-...+.++..+++ .+.||+.+-+|.++.-+++ .. |.++|+++
T Consensus 169 ~~~~-------~np-~~~~G~~t~~~Ei~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigV 229 (364)
T 4h27_A 169 IPPF-------DDP-LIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAM 229 (364)
T ss_dssp ECSS-------CSH-HHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEE
T ss_pred eCCC-------CCH-HHHHHHHHHHHHHHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEE
Confidence 1000 000 011222234567777774 6999999999998666554 33 88999999
No 237
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=47.33 E-value=97 Score=32.12 Aligned_cols=87 Identities=11% Similarity=0.177 Sum_probs=50.6
Q ss_pred Cce-EEEEecCHHHHhchHHHHhh-----cCeeEEeC-----Ccc---cCCC----CchhHHHHHHHHHHHHHHc--CCC
Q 010443 234 NIQ-LMSKVENQEGVVNFDDILRE-----TDSFMVAR-----GDL---GMEI----PVEKIFLAQKMMIYKCNLV--GKP 293 (510)
Q Consensus 234 ~~~-IiakIEt~~av~nldeI~~~-----~DgI~Igr-----gDL---g~e~----~~~~v~~~qk~ii~~~~~~--gkp 293 (510)
+.. |+.||=--..-+++.+|++. +|||.+.- -|+ +.+. |....+...+.+-+..++. ..|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 466 89999421122245566554 59998762 111 1111 1223344444444444555 589
Q ss_pred eEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 294 VVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 294 vivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
+|...-+- -..|+..++..|||+|++.
T Consensus 348 IIg~GGI~------------s~eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 348 IIASGGIF------------SGLDALEKIEAGASVCQLY 374 (415)
T ss_dssp EEECSSCC------------SHHHHHHHHHHTEEEEEES
T ss_pred EEEECCCC------------CHHHHHHHHHcCCCEEEEc
Confidence 88755433 2467788888999999996
No 238
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=47.23 E-value=59 Score=33.85 Aligned_cols=122 Identities=17% Similarity=0.191 Sum_probs=67.0
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.++++. .|..+....+...-..|++.+....+...+ .+...++...++..+....+..
T Consensus 175 AlA~aaa~~Gi~~~Iv-----------mP~~~s~~k~~~l~~~GAeVv~v~~~~~~d-~~~~~~~~a~~la~~~~~~~~i 242 (435)
T 1jbq_A 175 GLALAAAVRGYRCIIV-----------MPEKMSSEKVDVLRALGAEIVRTPTNARFD-SPESHVGVAWRLKNEIPNSHIL 242 (435)
T ss_dssp HHHHHHHHHTCEEEEE-----------ECSCCCHHHHHHHHHTTCEEEECCC--------CCHHHHHHHHHHHSTTEECC
T ss_pred HHHHHHHHcCCeEEEE-----------eCCCCCHHHHHHHHhCCCEEEEecCCCCcc-hHHHHHHHHHHHHHhcCCeEEe
Confidence 4567789999998763 233232334555666799977765432111 1222345555544433222110
Q ss_pred HHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPLESLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
.+ | ..+..+.......+.++.++++ .++||+.+-+|.++.-+++ ..|.+.|+++
T Consensus 243 ~q-~-------~n~~n~~ag~~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigV 302 (435)
T 1jbq_A 243 DQ-Y-------RNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGV 302 (435)
T ss_dssp CT-T-------TCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred Cc-c-------CCcccHHHHHHHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEE
Confidence 00 0 0111111112233566777763 6999999999999766665 4699999999
No 239
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=47.22 E-value=83 Score=29.88 Aligned_cols=115 Identities=17% Similarity=0.161 Sum_probs=74.3
Q ss_pred HHHcCCCeEEehhhhHhhhcCCC-----CChHhH----HHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhc
Q 010443 287 CNLVGKPVVTATQMLESMIKSPR-----PTRAEA----TDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAES 357 (510)
Q Consensus 287 ~~~~gkpvivaTqmLeSM~~~~~-----PtraEv----~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~ 357 (510)
|+....|+.+ |+. |+ -+..|+ .|+..+...|+|++++..=|..|.--.++.+.+-..+...+-
T Consensus 50 ~~~~~ipV~v-------MIR-PR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~v 121 (224)
T 2bdq_A 50 LHEKGISVAV-------MIR-PRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQGLPL 121 (224)
T ss_dssp HHHTTCEEEE-------ECC-SSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTCCE
T ss_pred hhhcCCceEE-------EEC-CCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCeE
Confidence 7788999987 444 32 245565 688899999999999999999999888877776665543322
Q ss_pred ccchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCchH-----------HHHHHhhCCCCcEEEE
Q 010443 358 SLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTT-----------AKLVAKYRPAVPILSV 423 (510)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~T~sG~t-----------A~~iSr~RP~~PIiav 423 (510)
. |++-.+..+ ..++ ..|.+...+++.+-|. |.-|.. .+++.+..++.-|++-
T Consensus 122 T------FHRAFD~~~-~~d~-----~~ale~L~~lGv~rIL--TSG~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~G 184 (224)
T 2bdq_A 122 V------FHMAFDVIP-KSDQ-----KKSIDQLVALGFTRIL--LHGSSNGEPIIENIKHIKALVEYANNRIEIMVG 184 (224)
T ss_dssp E------ECGGGGGSC-TTTH-----HHHHHHHHHTTCCEEE--ECSCSSCCCGGGGHHHHHHHHHHHTTSSEEEEC
T ss_pred E------EECchhccC-CcCH-----HHHHHHHHHcCCCEEE--CCCCCCCCcHHHHHHHHHHHHHhhCCCeEEEeC
Confidence 1 222222221 1122 2346666778999776 432221 2556667777777775
No 240
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=47.10 E-value=8.6 Score=32.37 Aligned_cols=62 Identities=13% Similarity=0.041 Sum_probs=45.2
Q ss_pred HHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010443 220 DLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 296 (510)
Q Consensus 220 dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviv 296 (510)
=+..+++...+.|-++.+.| .+...+++.+.-.|.+++|| .+....+++-+.|...|+||.+
T Consensus 22 lv~km~~~a~~~gi~v~i~a-----~~~~~~~~~~~~~DvvLLgP----------QV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 22 LANAINEGANLTEVRVIANS-----GAYGAHYDIMGVYDLIILAP----------QVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp HHHHHHHHHHHHTCSEEEEE-----EETTSCTTTGGGCSEEEECG----------GGGGGHHHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHHCCCceEEEE-----cchHHHHhhccCCCEEEECh----------HHHHHHHHHHHHhhhcCCcEEE
Confidence 45667777777776767766 23335677777789999986 5556667777788889999876
No 241
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=46.98 E-value=39 Score=33.79 Aligned_cols=71 Identities=11% Similarity=0.066 Sum_probs=46.2
Q ss_pred ccccccccCCCCCCCCCeEEEEecCCCCCCHH----HHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEE
Q 010443 5 DIEGLLRDVPNDKRLPKTKIVCTLGPASRSVP----MLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCA 80 (510)
Q Consensus 5 ~~~~~~~~~p~~~~~~~tkIi~TiGp~~~~~~----~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~ 80 (510)
-+.++|+.. ..+...-+++| ..+++ ..+++.++|.+.+.+++.|++.++-.++++.+|++. |.-+.
T Consensus 122 Pl~~llGg~-----~~~vp~~~~~g--~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g~~~~ 191 (359)
T 1mdl_A 122 PLVKLLGAN-----ARPVQAYDSHS--LDGVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAV---GDDFG 191 (359)
T ss_dssp BHHHHTTCC-----CCCEEEEEECC--SCHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHH---CSSSE
T ss_pred cHHHHhCCC-----CCCeeeeeecC--CCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHh---CCCCE
Confidence 345566632 13455566655 23343 445678899999999999988887778888888765 33344
Q ss_pred EEecC
Q 010443 81 VMLDT 85 (510)
Q Consensus 81 i~~Dl 85 (510)
|++|.
T Consensus 192 l~vDa 196 (359)
T 1mdl_A 192 IMVDY 196 (359)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 55554
No 242
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=46.76 E-value=1.2e+02 Score=29.05 Aligned_cols=91 Identities=16% Similarity=0.175 Sum_probs=51.9
Q ss_pred hHHHHhh-cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCce
Q 010443 250 FDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDC 328 (510)
Q Consensus 250 ldeI~~~-~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~ 328 (510)
+..+.+. +|.|+.-.++.|..-+... +...+++. +....|+++..- .-| -.|+..++..|+|+
T Consensus 140 a~~~~~~gad~v~~~~~~~Gt~~~~~~-~~~l~~i~---~~~~iPviv~gG---------I~t---~eda~~~~~~GAdg 203 (264)
T 1xm3_A 140 ARKLEELGVHAIMPGASPIGSGQGILN-PLNLSFII---EQAKVPVIVDAG---------IGS---PKDAAYAMELGADG 203 (264)
T ss_dssp HHHHHHHTCSCBEECSSSTTCCCCCSC-HHHHHHHH---HHCSSCBEEESC---------CCS---HHHHHHHHHTTCSE
T ss_pred HHHHHHhCCCEEEECCcccCCCCCCCC-HHHHHHHH---hcCCCCEEEEeC---------CCC---HHHHHHHHHcCCCE
Confidence 3444443 5666442445554433322 22222332 235789987533 222 24567778899999
Q ss_pred EEeccCCCCCCCHHHHHHHHHHHHHHHh
Q 010443 329 VMLSGESAAGAYPEIAVKIMRRICIEAE 356 (510)
Q Consensus 329 imLs~Eta~G~yP~~~V~~m~~i~~~aE 356 (510)
+....--.....|.++++.+.+.+++..
T Consensus 204 ViVGSAi~~a~dp~~~~~~l~~~v~~~~ 231 (264)
T 1xm3_A 204 VLLNTAVSGADDPVKMARAMKLAVEAGR 231 (264)
T ss_dssp EEESHHHHTSSSHHHHHHHHHHHHHHHH
T ss_pred EEEcHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 9997533333568888888887776544
No 243
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=46.55 E-value=1.4e+02 Score=29.11 Aligned_cols=81 Identities=17% Similarity=0.169 Sum_probs=52.5
Q ss_pred cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcC-CCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCC
Q 010443 257 TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVG-KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGES 335 (510)
Q Consensus 257 ~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~g-kpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Et 335 (510)
+|.||--....|...|+.. +...+.+++. ... .|||++-. .-|. +|++.+...|+|++++..=-
T Consensus 146 ~~aVmPlg~pIGsG~Gi~~-~~~L~~i~~~--~~~~vPVI~~GG---------I~tp---sDAa~AmeLGAdgVlVgSAI 210 (268)
T 2htm_A 146 TATVMPLAAPIGSGWGVRT-RALLELFARE--KASLPPVVVDAG---------LGLP---SHAAEVMELGLDAVLVNTAI 210 (268)
T ss_dssp CSCBEEBSSSTTTCCCSTT-HHHHHHHHHT--TTTSSCBEEESC---------CCSH---HHHHHHHHTTCCEEEESHHH
T ss_pred CCEEEecCccCcCCcccCC-HHHHHHHHHh--cCCCCeEEEeCC---------CCCH---HHHHHHHHcCCCEEEEChHH
Confidence 6777764455555555554 3333333221 234 79998543 3333 57799999999999998777
Q ss_pred CCCCCHHHHHHHHHHHH
Q 010443 336 AAGAYPEIAVKIMRRIC 352 (510)
Q Consensus 336 a~G~yP~~~V~~m~~i~ 352 (510)
+.++.|.+-.+.|..-+
T Consensus 211 ~~a~dP~~ma~af~~Av 227 (268)
T 2htm_A 211 AEAQDPPAMAEAFRLAV 227 (268)
T ss_dssp HTSSSHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHH
Confidence 78888987666666544
No 244
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=46.34 E-value=1.7e+02 Score=29.73 Aligned_cols=140 Identities=9% Similarity=0.087 Sum_probs=88.9
Q ss_pred HHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEe-cCH-HHHhchHHHHhhcCeeEEeCCcccCCCC
Q 010443 195 KEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV-ENQ-EGVVNFDDILRETDSFMVARGDLGMEIP 272 (510)
Q Consensus 195 ~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakI-Et~-~av~nldeI~~~~DgI~IgrgDLg~e~~ 272 (510)
.+.+ ....+.|+|.|-++.- +.++.+.++.+-+. .+++++|=| -+. .++. .+-.-+|.+=|.||.+|-
T Consensus 49 v~Qi-~~l~~aG~diVRvavp-~~~~a~al~~I~~~--~~vPlvaDiHf~~~lal~---a~e~G~dklRINPGNig~--- 118 (366)
T 3noy_A 49 LNQI-KRLYEAGCEIVRVAVP-HKEDVEALEEIVKK--SPMPVIADIHFAPSYAFL---SMEKGVHGIRINPGNIGK--- 118 (366)
T ss_dssp HHHH-HHHHHTTCCEEEEECC-SHHHHHHHHHHHHH--CSSCEEEECCSCHHHHHH---HHHTTCSEEEECHHHHSC---
T ss_pred HHHH-HHHHHcCCCEEEeCCC-ChHHHHHHHHHHhc--CCCCEEEeCCCCHHHHHH---HHHhCCCeEEECCcccCc---
Confidence 3444 4556799999888754 56666666665443 368999987 333 3333 222238999999999984
Q ss_pred chhHHHHHHHHHHHHHHcCCCeEE-------ehhhhHhhhcCCCCChHhH-----HHHHHHHHcCCceEEeccCCCCCCC
Q 010443 273 VEKIFLAQKMMIYKCNLVGKPVVT-------ATQMLESMIKSPRPTRAEA-----TDVANAVLDGTDCVMLSGESAAGAY 340 (510)
Q Consensus 273 ~~~v~~~qk~ii~~~~~~gkpviv-------aTqmLeSM~~~~~PtraEv-----~Dv~~av~~G~D~imLs~Eta~G~y 340 (510)
.++ -+.++.+|+++|+|+=+ ...+|+.+- .||...+ ..+.-+-..|+|-+.+|--.+ -
T Consensus 119 ~~~----~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg---~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S---~ 188 (366)
T 3noy_A 119 EEI----VREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYG---YPSAEALAESALRWSEKFEKWGFTNYKVSIKGS---D 188 (366)
T ss_dssp HHH----HHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHS---SCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECS---S
T ss_pred hhH----HHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHhCCCCeEEEeeecC---C
Confidence 223 36799999999999844 456666552 2443322 123335667999999986554 4
Q ss_pred HHHHHHHHHHHHHH
Q 010443 341 PEIAVKIMRRICIE 354 (510)
Q Consensus 341 P~~~V~~m~~i~~~ 354 (510)
+..+|+.-+.+.++
T Consensus 189 v~~~i~ayr~la~~ 202 (366)
T 3noy_A 189 VLQNVRANLIFAER 202 (366)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhc
Confidence 55566655555444
No 245
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=46.29 E-value=54 Score=32.30 Aligned_cols=111 Identities=16% Similarity=0.130 Sum_probs=74.0
Q ss_pred cCcCCCCEEEEcCCCC--------------HHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcc
Q 010443 202 GVPNNIDMIALSFVRK--------------GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDL 267 (510)
Q Consensus 202 a~~~g~d~I~~sfV~s--------------a~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDL 267 (510)
+.+.+..+|+-+..+. .+-++.++++..+. .+.+++-+-.++.++-+ .+.+|.+-||.+++
T Consensus 47 ~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~--Glp~~Tev~d~~~v~~l---~~~vd~lqIgA~~~ 121 (285)
T 3sz8_A 47 TRKLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARF--GVPVITDVHEAEQAAPV---AEIADVLQVPAFLA 121 (285)
T ss_dssp HHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHH--CCCEEEECCSGGGHHHH---HTTCSEEEECGGGT
T ss_pred HHhheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHH---HHhCCEEEECcccc
Confidence 3345677777763332 36677788877654 57788888777766544 45599999997665
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHH-cCCceEEeccCCC
Q 010443 268 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVL-DGTDCVMLSGESA 336 (510)
Q Consensus 268 g~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~-~G~D~imLs~Eta 336 (510)
-- .+ +++++.+.||||++.|.|. -|-.|+...++.+. .|.+-++|..=++
T Consensus 122 ~n------~~-----LLr~va~~gkPVilK~G~~--------~t~~ei~~ave~i~~~Gn~~i~L~erg~ 172 (285)
T 3sz8_A 122 RQ------TD-----LVVAIAKAGKPVNVKKPQF--------MSPTQLKHVVSKCGEVGNDRVMLCERGS 172 (285)
T ss_dssp TC------HH-----HHHHHHHTSSCEEEECCTT--------SCGGGTHHHHHHHHHTTCCCEEEEECCE
T ss_pred CC------HH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 32 22 5556668999999976653 35567766677654 4888788864433
No 246
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=46.24 E-value=94 Score=31.28 Aligned_cols=150 Identities=13% Similarity=0.052 Sum_probs=77.4
Q ss_pred ChhcHHHHHhccCcCCCC-EEEEcCC-----------CCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh--
Q 010443 191 TEKDKEDILRWGVPNNID-MIALSFV-----------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-- 256 (510)
Q Consensus 191 t~~D~~di~~~a~~~g~d-~I~~sfV-----------~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-- 256 (510)
+..|.....+...+.|++ +|-+.+- ++++.+.++-+.+++. .++.|+.||=--.....+.++++.
T Consensus 139 ~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~-~~~PV~vKi~p~~~~~~~a~~~~~ag 217 (345)
T 3oix_A 139 SPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTY-FTKPLGIKLPPYFDIVHFDQAAAIFN 217 (345)
T ss_dssp SHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHH-hCCCeEEEECCCCCHHHHHHHHHHhC
Confidence 445555443444445776 8877654 4556666665555543 357899999532222333344433
Q ss_pred cCeeE-------------EeCCccc----CCC----CchhHHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChH
Q 010443 257 TDSFM-------------VARGDLG----MEI----PVEKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRA 313 (510)
Q Consensus 257 ~DgI~-------------IgrgDLg----~e~----~~~~v~~~qk~ii~~~~~~--gkpvivaTqmLeSM~~~~~Ptra 313 (510)
+|+|- |.+.-.. ... |....+...+.+-+..++. ..|+|...-+- |
T Consensus 218 a~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~---------s-- 286 (345)
T 3oix_A 218 XYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVX---------T-- 286 (345)
T ss_dssp TSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCC---------S--
T ss_pred CCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCC---------C--
Confidence 35441 2211110 111 1223344444444444444 47888754432 2
Q ss_pred hHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcc
Q 010443 314 EATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESS 358 (510)
Q Consensus 314 Ev~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~ 358 (510)
..|+..++..|||+||+..--..+ -| .++.+|.++.+.+
T Consensus 287 -~~da~~~l~aGAd~V~igra~~~~-gP----~~~~~i~~~L~~~ 325 (345)
T 3oix_A 287 -GRDAFEHILCGASMVQIGTALHQE-GP----QIFKRITKELXAI 325 (345)
T ss_dssp -HHHHHHHHHHTCSEEEESHHHHHH-CT----HHHHHHHHHHHHH
T ss_pred -hHHHHHHHHhCCCEEEEChHHHhc-Ch----HHHHHHHHHHHHH
Confidence 457778888999999997431111 13 3455565555543
No 247
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=46.05 E-value=31 Score=28.96 Aligned_cols=41 Identities=34% Similarity=0.494 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC--------chHHHHHHhhCCCCcEEEE
Q 010443 382 LASSAVRTANKARAKLIVVLTRG--------GTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 382 ia~~av~~A~~~~a~aIvv~T~s--------G~tA~~iSr~RP~~PIiav 423 (510)
.+...++.|.+.+++.||+-++. |.++..+.+.-| |||+.+
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 145 (150)
T 3tnj_A 97 PREEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAK-CDVLAV 145 (150)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCS-SEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCC-CCEEEE
Confidence 45566778999999998888753 667788877655 999998
No 248
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=45.99 E-value=1.5e+02 Score=26.97 Aligned_cols=108 Identities=11% Similarity=0.119 Sum_probs=58.3
Q ss_pred ChhcHHHHHhccCcCCCCEEEEc-CCCCHHHHHHHHHHhccCCC-CceEEEEecCHHHHhchHHHHhh-cCeeEEeCCcc
Q 010443 191 TEKDKEDILRWGVPNNIDMIALS-FVRKGSDLVNVRKVLGPHAK-NIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDL 267 (510)
Q Consensus 191 t~~D~~di~~~a~~~g~d~I~~s-fV~sa~dv~~vr~~l~~~~~-~~~IiakIEt~~av~nldeI~~~-~DgI~IgrgDL 267 (510)
+..+..++ ..+++.|+|+|.+. +--+.++..++.+.+.+.+. ...++. . +.++...+. +|++-++-.|+
T Consensus 28 ~~~~l~~~-~~~~~~G~~~v~lr~~~~~~~~~~~~~~~l~~~~~~~~~l~v--~-----~~~~~a~~~gad~v~l~~~~~ 99 (221)
T 1yad_A 28 PVEELARI-IITIQNEVDFIHIRERSKSAADILKLLDLIFEGGIDKRKLVM--N-----GRVDIALFSTIHRVQLPSGSF 99 (221)
T ss_dssp CHHHHHHH-HHHHGGGCSEEEECCTTSCHHHHHHHHHHHHHTTCCGGGEEE--E-----SCHHHHHTTTCCEEEECTTSC
T ss_pred CcchHHHH-HHHHHCCCCEEEEccCCCCHHHHHHHHHHHHHhcCcCCeEEE--e-----ChHHHHHHcCCCEEEeCCCcc
Confidence 33344566 66788999999874 22345555555555543321 112332 2 234444444 69999985543
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 268 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 268 g~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
+. ..+++ ... |+.+++.. .|.. ++..+...|+|.++++.
T Consensus 100 ----~~---~~~~~-----~~~-~~~ig~sv-----------~t~~---~~~~a~~~gaD~i~~~~ 138 (221)
T 1yad_A 100 ----SP---KQIRA-----RFP-HLHIGRSV-----------HSLE---EAVQAEKEDADYVLFGH 138 (221)
T ss_dssp ----CH---HHHHH-----HCT-TCEEEEEE-----------CSHH---HHHHHHHTTCSEEEEEC
T ss_pred ----CH---HHHHH-----HCC-CCEEEEEc-----------CCHH---HHHHHHhCCCCEEEECC
Confidence 11 11111 111 55555532 2333 34567789999999964
No 249
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=45.96 E-value=29 Score=34.96 Aligned_cols=57 Identities=14% Similarity=0.173 Sum_probs=38.8
Q ss_pred CCCCCCHHHHHHHHHhCCCeEEEeecCCC-------H-HHHHHHHHHHHHHHHhcCCcEEEEecCCC
Q 010443 29 GPASRSVPMLEKLLRAGMNVARFNFSHGT-------H-EYQQETLNNLRAAMHNTQILCAVMLDTKG 87 (510)
Q Consensus 29 Gp~~~~~~~l~~li~~G~~~~RiN~sh~~-------~-~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 87 (510)
|..-.+.+.++.|-+.|+|++||-++... . +...+.++.+=+.+.+.| +.+++|+-.
T Consensus 49 g~~~~t~~di~~ik~~G~N~vRipi~w~~~~~~~g~~d~~~l~~ld~vVd~a~~~G--i~vIldlH~ 113 (353)
T 3l55_A 49 GQPETTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMNAG--LYAIVNVHH 113 (353)
T ss_dssp SCCCCCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHHHT--CEEEEECCT
T ss_pred CCCCCCHHHHHHHHHcCCCEEEEcccHHHhcCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEECCC
Confidence 44445789999999999999999997532 1 233444454444555666 467888874
No 250
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=45.86 E-value=35 Score=35.80 Aligned_cols=99 Identities=12% Similarity=0.071 Sum_probs=59.6
Q ss_pred CCCChhcHHHHHhccCcCCCCEEEEcCCCC------------------------HHHHHHHHHHhccCCCCceEEE--Ee
Q 010443 188 PTLTEKDKEDILRWGVPNNIDMIALSFVRK------------------------GSDLVNVRKVLGPHAKNIQLMS--KV 241 (510)
Q Consensus 188 p~lt~~D~~di~~~a~~~g~d~I~~sfV~s------------------------a~dv~~vr~~l~~~~~~~~Iia--kI 241 (510)
|.+++.|..++.+.+.+.|+|+|.++--.. .+-+.++++.+ +.++.||+ -|
T Consensus 306 pd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v---~~~iPVIg~GGI 382 (443)
T 1tv5_A 306 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYT---NKQIPIIASGGI 382 (443)
T ss_dssp SCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHT---TTCSCEEEESSC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHc---CCCCcEEEECCC
Confidence 346777777776778889999999986421 12333444433 34677777 57
Q ss_pred cCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCC
Q 010443 242 ENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKP 293 (510)
Q Consensus 242 Et~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkp 293 (510)
.|.+-. .+-|..-+|+|++||+=+-- +..-+..+.+.+-....+.|..
T Consensus 383 ~s~~DA--~e~l~aGAd~Vqigrall~~--gP~l~~~i~~~l~~~l~~~G~~ 430 (443)
T 1tv5_A 383 FSGLDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGYY 430 (443)
T ss_dssp CSHHHH--HHHHHTTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHHTCS
T ss_pred CCHHHH--HHHHHcCCCEEEEcHHHHhc--ChHHHHHHHHHHHHHHHHhCCC
Confidence 776554 33333448999999985521 2233444555555555555643
No 251
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=45.63 E-value=1.4e+02 Score=31.42 Aligned_cols=186 Identities=16% Similarity=0.067 Sum_probs=109.5
Q ss_pred CCChhcHHHHHhccCcCCCCEEEEcCCC---------CHHHHHHHHHHhccCCCCceEEEEecC--HHHHh---------
Q 010443 189 TLTEKDKEDILRWGVPNNIDMIALSFVR---------KGSDLVNVRKVLGPHAKNIQLMSKVEN--QEGVV--------- 248 (510)
Q Consensus 189 ~lt~~D~~di~~~a~~~g~d~I~~sfV~---------sa~dv~~vr~~l~~~~~~~~IiakIEt--~~av~--------- 248 (510)
.++..|+..|.+...+.|++.|=+-+-- ++++.+.++.+-+. .+++++.+.+=. ..|..
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~-~~~~~l~~l~R~~N~~G~~~~~ddv~~~ 104 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQA-MPNTPLQMLLRGQNLLGYRHYADDVVDT 104 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHH-CSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHh-CCCCeEEEEeccccccCcccccchhhHH
Confidence 4666776666466677899998775311 45555555554332 245566655522 22322
Q ss_pred chHHHHhh-cCeeEE--eCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHc
Q 010443 249 NFDDILRE-TDSFMV--ARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLD 324 (510)
Q Consensus 249 nldeI~~~-~DgI~I--grgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~ 324 (510)
+++..++. .|.|-| +--|+ .-.+..++.++++|+.+..+- |+...+.=+...+.+++. +...
T Consensus 105 ~v~~a~~~Gvd~i~if~~~sd~----------~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~ 170 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVFDAMNDV----------RNMQQALQAVKKMGAHAQGTL----CYTTSPVHNLQTWVDVAQQLAEL 170 (464)
T ss_dssp HHHHHHHTTCCEEEECCTTCCT----------HHHHHHHHHHHHTTCEEEEEE----ECCCCTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCcCEEEEEEecCHH----------HHHHHHHHHHHHCCCEEEEEE----EeeeCCCCCHHHHHHHHHHHHHC
Confidence 23333333 464443 22222 234678899999999885432 344445556777777777 6678
Q ss_pred CCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCC
Q 010443 325 GTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRG 404 (510)
Q Consensus 325 G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~T~s 404 (510)
|+|.|.|. +|+=+-.|.++-+.++.+.++..-.+.. +++ . ..-+|.+...+|-..||+ +|=-|-+
T Consensus 171 Gad~I~l~-DT~G~~~P~~v~~lv~~l~~~~~~~i~~--H~H-----n------d~GlAvAN~laAv~AGa~-~VD~ti~ 235 (464)
T 2nx9_A 171 GVDSIALK-DMAGILTPYAAEELVSTLKKQVDVELHL--HCH-----S------TAGLADMTLLKAIEAGVD-RVDTAIS 235 (464)
T ss_dssp TCSEEEEE-ETTSCCCHHHHHHHHHHHHHHCCSCEEE--EEC-----C------TTSCHHHHHHHHHHTTCS-EEEEBCG
T ss_pred CCCEEEEc-CCCCCcCHHHHHHHHHHHHHhcCCeEEE--EEC-----C------CCChHHHHHHHHHHhCCC-EEEEecc
Confidence 99999997 7888888999999988887655211110 100 0 112445555667778888 4444533
No 252
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=45.55 E-value=93 Score=28.72 Aligned_cols=111 Identities=13% Similarity=0.073 Sum_probs=64.0
Q ss_pred cHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEE-----------ecCHHHHhchHHHHhh-cCeeE
Q 010443 194 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSK-----------VENQEGVVNFDDILRE-TDSFM 261 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~Iiak-----------IEt~~av~nldeI~~~-~DgI~ 261 (510)
+...+.+.+.+.|++++.+. +++.++.+++.. ++.++.- |+. -.+.+++.++. +|.|.
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~---~~~~i~~i~~~~-----~~p~i~~~~~~~~~~~~~i~~--~~~~i~~~~~~Gad~V~ 106 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRAN---SVRDIKEIQAIT-----DLPIIGIIKKDYPPQEPFITA--TMTEVDQLAALNIAVIA 106 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEE---SHHHHHHHHTTC-----CSCEEEECBCCCTTSCCCBSC--SHHHHHHHHTTTCSEEE
T ss_pred hHHHHHHHHHHCCCcEeecC---CHHHHHHHHHhC-----CCCEEeeEcCCCCccccccCC--hHHHHHHHHHcCCCEEE
Confidence 44455466678899999864 788888888764 2344321 221 22345555554 79888
Q ss_pred EeCCcccCCCCchhHHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceE--Eecc
Q 010443 262 VARGDLGMEIPVEKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCV--MLSG 333 (510)
Q Consensus 262 IgrgDLg~e~~~~~v~~~qk~ii~~~~~~--gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~i--mLs~ 333 (510)
++-.-+.-.-+ ..+ .++++.+++. ++++++-. -|..| ...+...|+|.+ .+.+
T Consensus 107 l~~~~~~~~~~-~~~----~~~i~~i~~~~~~~~v~~~~-----------~t~~e---a~~a~~~Gad~i~~~v~g 163 (234)
T 1yxy_A 107 MDCTKRDRHDG-LDI----ASFIRQVKEKYPNQLLMADI-----------STFDE---GLVAHQAGIDFVGTTLSG 163 (234)
T ss_dssp EECCSSCCTTC-CCH----HHHHHHHHHHCTTCEEEEEC-----------SSHHH---HHHHHHTTCSEEECTTTT
T ss_pred EcccccCCCCC-ccH----HHHHHHHHHhCCCCeEEEeC-----------CCHHH---HHHHHHcCCCEEeeeccc
Confidence 76432211000 112 4567777776 77776522 13333 566788999999 4443
No 253
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=45.34 E-value=21 Score=35.66 Aligned_cols=85 Identities=20% Similarity=0.226 Sum_probs=57.5
Q ss_pred CceEEEEecCH--------HHHhchHHHHhh-cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhh
Q 010443 234 NIQLMSKVENQ--------EGVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESM 304 (510)
Q Consensus 234 ~~~IiakIEt~--------~av~nldeI~~~-~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM 304 (510)
.++++++.|+. .-.+.++.++.. ..+|++.|||+- -+.+++.|+++|.|++. |
T Consensus 49 RVQi~Gn~E~~yL~~L~~e~~~~rler~l~~~~P~IIltrg~~~-----------peelie~A~~~~IPVL~-T------ 110 (314)
T 1ko7_A 49 RIQLLGTTELSFYNLLPDEERKGRMRKLCRPETPAIIVTRDLEP-----------PEELIEAAKEHETPLIT-S------ 110 (314)
T ss_dssp SEEEECHHHHHHHHHSCHHHHTTHHHHHCCTTCCCEEECTTCCC-----------CHHHHHHHHHTTCCEEE-C------
T ss_pred cEEEEechhHHHHHhcCHHHHHHHHHHHhcCCCCEEEEeCCCCC-----------CHHHHHHHHHCCCeEEE-E------
Confidence 56667666652 222344555442 479999999984 12478889999999885 3
Q ss_pred hcCCCCChHhHHHHHHHHHc---------------CCceEEeccCCCCCC
Q 010443 305 IKSPRPTRAEATDVANAVLD---------------GTDCVMLSGESAAGA 339 (510)
Q Consensus 305 ~~~~~PtraEv~Dv~~av~~---------------G~D~imLs~Eta~G~ 339 (510)
+.+|-.=+..+.+++.. +--++++.|++-.||
T Consensus 111 ---~~~ts~~~~~l~~~l~~~~~~~~~~H~~~v~~~g~~vl~~G~sG~GK 157 (314)
T 1ko7_A 111 ---KIATTQLMSRLTTFLEHELARTTSLHGVLVDVYGVGVLITGDSGIGK 157 (314)
T ss_dssp ---CSCHHHHHHHHHHHHHHHTCEEEEEESEEEEETTEEEEEEESTTSSH
T ss_pred ---CCchhHHHHHHHHHHHHhhccceeeeEEEEEECCEEEEEEeCCCCCH
Confidence 34555555666666665 225899999999998
No 254
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=45.33 E-value=48 Score=32.84 Aligned_cols=97 Identities=10% Similarity=0.103 Sum_probs=57.9
Q ss_pred HHHhccCcCCCCEEEEc------CCCCHHHHHHH-HHHhccCCCCceEEEEec--CHHHHhchHHHHhh-cCeeEEeCCc
Q 010443 197 DILRWGVPNNIDMIALS------FVRKGSDLVNV-RKVLGPHAKNIQLMSKVE--NQEGVVNFDDILRE-TDSFMVARGD 266 (510)
Q Consensus 197 di~~~a~~~g~d~I~~s------fV~sa~dv~~v-r~~l~~~~~~~~IiakIE--t~~av~nldeI~~~-~DgI~IgrgD 266 (510)
.+.++.++.|+|+|++. +.-|.++=.++ +..++..+.++.||+-+= |.++++......+. +|++++-+-.
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~ 116 (314)
T 3d0c_A 37 DNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPV 116 (314)
T ss_dssp HHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 33378889999998863 23344444444 333444456788999885 45555555544443 6999987544
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 267 LGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 267 Lg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
+.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 117 y~~-~s~~~l~~~f~~v---a~a~~lPiilY 143 (314)
T 3d0c_A 117 HPY-ITDAGAVEYYRNI---IEALDAPSIIY 143 (314)
T ss_dssp CSC-CCHHHHHHHHHHH---HHHSSSCEEEE
T ss_pred CCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 421 2334544444444 55668999874
No 255
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=45.28 E-value=1.3e+02 Score=29.23 Aligned_cols=98 Identities=7% Similarity=-0.097 Sum_probs=60.2
Q ss_pred HHHHHhccCcCCCCEEEEc------CCCCHHHHHHHHHHhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeC
Q 010443 195 KEDILRWGVPNNIDMIALS------FVRKGSDLVNVRKVLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVAR 264 (510)
Q Consensus 195 ~~di~~~a~~~g~d~I~~s------fV~sa~dv~~vr~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~Igr 264 (510)
.+.+.++.++.|+|+|++. +.-|.++=.++-+...+.-.. +|+-+= |.++++......+. +||+|+-+
T Consensus 22 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 99 (288)
T 2nuw_A 22 LKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDILGVSSHS 99 (288)
T ss_dssp HHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3333378889999999873 344555555555554443233 888873 47777766665554 79999976
Q ss_pred CcccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 265 GDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 265 gDLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
-.+.-..+.+.+...-+.| |.+.+.|+++.
T Consensus 100 P~y~~~~s~~~l~~~f~~v---a~a~~lPiilY 129 (288)
T 2nuw_A 100 PYYFPRLPEKFLAKYYEEI---ARISSHSLYIY 129 (288)
T ss_dssp CCSSCSCCHHHHHHHHHHH---HHHCCSCEEEE
T ss_pred CcCCCCCCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 5443212344555454555 45568999874
No 256
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=44.92 E-value=2.1e+02 Score=30.36 Aligned_cols=147 Identities=18% Similarity=0.215 Sum_probs=85.4
Q ss_pred ceEEEEecCHHHHhchHH------HHhhc-----CeeEEe-CCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhH
Q 010443 235 IQLMSKVENQEGVVNFDD------ILRET-----DSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLE 302 (510)
Q Consensus 235 ~~IiakIEt~~av~nlde------I~~~~-----DgI~Ig-rgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLe 302 (510)
..|+.|.|..+-.-.+.+ |.+.. .+|+-+ -|+-| .-+..+|+..|.|+.+-
T Consensus 46 ~~V~lK~E~lqPtgSfKdRgA~n~i~~l~~~~~~~gVV~aSsGNhg------------~avA~aa~~lGi~~~Iv----- 108 (514)
T 1tdj_A 46 NVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVITASAGNHA------------QGVAFSSARLGVKALIV----- 108 (514)
T ss_dssp SEEEEECGGGSTTSSSTHHHHHHHHHTTTTSSCSSSCEEEECSSSH------------HHHHHHHHHTTCCEEEE-----
T ss_pred CeEEEEECCCCCcccHHHHHHHHHHHHHHHhcCCCEEEEECCcHHH------------HHHHHHHHHcCCcEEEE-----
Confidence 469999998765532221 22221 244433 33332 23566788999998763
Q ss_pred hhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCC-Cc--h
Q 010443 303 SMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPM-SP--L 379 (510)
Q Consensus 303 SM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~~~~~~~~~~-~~--~ 379 (510)
.|...-...+...-..|++.+.. + ...-++.+...+++++-...+- .|- ++ .
T Consensus 109 ------mP~~~p~~Kv~~~r~~GAeVvlv-~-----~~~dda~~~a~ela~e~g~~~v-------------~pfdnp~~i 163 (514)
T 1tdj_A 109 ------MPTATADIKVDAVRGFGGEVLLH-G-----ANFDEAKAKAIELSQQQGFTWV-------------PPFDHPMVI 163 (514)
T ss_dssp ------CCSSCCHHHHHHHHHHSCEEECC-C-----SSHHHHHHHHHHHHHHHCCEEC-------------CSSCCHHHH
T ss_pred ------ECCCCCHHHHHHHHHCCCEEEEE-C-----CCHHHHHHHHHHHHHhcCCEee-------------CCCCCHHHH
Confidence 23222234555666679986653 2 2345676666665544221110 111 11 1
Q ss_pred HHHHHHHHHHHHhcC-CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 380 ESLASSAVRTANKAR-AKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 380 ~~ia~~av~~A~~~~-a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
..-..-+.++.++++ .++|||.+-+|.++.-+++ .+|...|+++
T Consensus 164 aGqgTig~EI~eQl~~~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgV 212 (514)
T 1tdj_A 164 AGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAV 212 (514)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCCCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEE
Confidence 222233667777764 7999999999998776665 4799999999
No 257
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=44.79 E-value=77 Score=31.41 Aligned_cols=110 Identities=10% Similarity=0.078 Sum_probs=73.6
Q ss_pred cCcCCCCEEEEcCCCC--------------HHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcc
Q 010443 202 GVPNNIDMIALSFVRK--------------GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDL 267 (510)
Q Consensus 202 a~~~g~d~I~~sfV~s--------------a~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDL 267 (510)
+.+.+..+|+-+..+. .+-++.++++..+. .+.+++-+-.++.++-+. +.+|.+-||.+++
T Consensus 68 ~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~--GLpv~Tev~D~~~v~~l~---~~vd~lkIgA~~~ 142 (298)
T 3fs2_A 68 TDKLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEY--GFPVLTDIHTEEQCAAVA---PVVDVLQIPAFLC 142 (298)
T ss_dssp HHHHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHH--CCCEEEECCSHHHHHHHT---TTCSEEEECGGGT
T ss_pred HHHcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHH---hhCCEEEECcccc
Confidence 3345677787764442 35677777777654 578888888877776554 4589999996655
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHH-cCCceEEeccCC
Q 010443 268 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVL-DGTDCVMLSGES 335 (510)
Q Consensus 268 g~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~-~G~D~imLs~Et 335 (510)
- ..+ +++++.+.||||++.|.|. -|-.|+...++.+. .|.+-++|..-+
T Consensus 143 ~------n~~-----LLr~va~~gkPVilK~Gms--------~t~~ei~~ave~i~~~Gn~~iiL~erg 192 (298)
T 3fs2_A 143 R------QTD-----LLIAAARTGRVVNVKKGQF--------LAPWDMKNVLAKITESGNPNVLATERG 192 (298)
T ss_dssp T------CHH-----HHHHHHHTTSEEEEECCTT--------CCGGGHHHHHHHHHTTTCCCEEEEECC
T ss_pred C------CHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 2 233 4445568899999976652 35677777777665 477778885433
No 258
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=44.77 E-value=1.1e+02 Score=31.09 Aligned_cols=167 Identities=14% Similarity=0.144 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHcCCCeEEehh---hhHhhhc-CC----------CCChHhHHH-HHHHHHcCCceEEeccCCCC-CCCHH
Q 010443 279 AQKMMIYKCNLVGKPVVTATQ---MLESMIK-SP----------RPTRAEATD-VANAVLDGTDCVMLSGESAA-GAYPE 342 (510)
Q Consensus 279 ~qk~ii~~~~~~gkpvivaTq---mLeSM~~-~~----------~PtraEv~D-v~~av~~G~D~imLs~Eta~-G~yP~ 342 (510)
--..+.++|.++|.|.++.|. -+|.+.. .| ..+|.-..+ +..|-..|+.+++|+-+++. |+-+.
T Consensus 87 ge~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~ 166 (352)
T 3sgz_A 87 GEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRR 166 (352)
T ss_dssp HHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHH
T ss_pred HHHHHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchh
Confidence 445788999999999999883 2333332 12 235555544 45588899999999999986 44333
Q ss_pred HHHHHH--------HHHH------------H-HHhcccchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEE
Q 010443 343 IAVKIM--------RRIC------------I-EAESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVL 401 (510)
Q Consensus 343 ~~V~~m--------~~i~------------~-~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~ 401 (510)
+.-.-+ .... . .....+.++ ....+....+.|.-.-......-.+.+.+.++++|++.
T Consensus 167 d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~-~i~~lr~~~~~PvivK~v~~~e~A~~a~~~GaD~I~vs 245 (352)
T 3sgz_A 167 DKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWN-DLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVS 245 (352)
T ss_dssp HHHHHHHSCHHHHTTCC---------------CCCTTCCHH-HHHHHHHHCCSCEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred hhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHH-HHHHHHHhcCCCEEEEecCcHHHHHHHHHcCCCEEEEe
Confidence 311100 0000 0 000111111 12233332222221111111233466778999998886
Q ss_pred cCCch-------HHHHH----HhhCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeC
Q 010443 402 TRGGT-------TAKLV----AKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAE 458 (510)
Q Consensus 402 T~sG~-------tA~~i----Sr~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~ 458 (510)
-+.|+ +...+ ...++++||++- .++. ...++++.|.+ |-.-+.+.
T Consensus 246 n~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~-------GGI~---~g~Dv~kaLal--GA~aV~iG 301 (352)
T 3sgz_A 246 NHGGRQLDEVSASIDALREVVAAVKGKIEVYMD-------GGVR---TGTDVLKALAL--GARCIFLG 301 (352)
T ss_dssp CGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEE-------SSCC---SHHHHHHHHHT--TCSEEEES
T ss_pred CCCCCccCCCccHHHHHHHHHHHhCCCCeEEEE-------CCCC---CHHHHHHHHHc--CCCEEEEC
Confidence 55442 22222 234678999998 4444 56777777775 76655553
No 259
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=44.75 E-value=63 Score=32.51 Aligned_cols=71 Identities=10% Similarity=0.084 Sum_probs=44.4
Q ss_pred cccccccCCCCCCCCCeEEEEecCCCCCCHH----HHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEE
Q 010443 6 IEGLLRDVPNDKRLPKTKIVCTLGPASRSVP----MLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAV 81 (510)
Q Consensus 6 ~~~~~~~~p~~~~~~~tkIi~TiGp~~~~~~----~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i 81 (510)
+.++|+..+. .+.....|+|- .+++ ..+++.++|.+.+.+++.|++.++-.+.++.+|++ .|.-+.+
T Consensus 123 l~~llGg~~~----~~v~~~~~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g~~~~l 193 (378)
T 2qdd_A 123 LWQLLGGEAA----TPVPINSSIST--GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAG---LPDGHRV 193 (378)
T ss_dssp HHHHTTCSSC----CCEEBEEEECS--CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHS---CCTTCEE
T ss_pred HHHHhCCCCC----CCCceEEEecC--CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHH---hCCCCEE
Confidence 4455653322 23556677764 2444 34567889999999999998777766777777764 3333345
Q ss_pred EecC
Q 010443 82 MLDT 85 (510)
Q Consensus 82 ~~Dl 85 (510)
++|.
T Consensus 194 ~vDa 197 (378)
T 2qdd_A 194 TFDV 197 (378)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 5554
No 260
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=44.56 E-value=42 Score=32.53 Aligned_cols=103 Identities=10% Similarity=0.038 Sum_probs=60.5
Q ss_pred cHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEe---cC--------HHHHhchHHHHhhcCeeEE
Q 010443 194 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV---EN--------QEGVVNFDDILRETDSFMV 262 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakI---Et--------~~av~nldeI~~~~DgI~I 262 (510)
|.+.+.+.+.+.|++.++++-+ +.++...+.++.+..+ ++...+=| +. .+.++.+++.++..+.-.+
T Consensus 28 d~~~vl~~~~~~GV~~~v~~~~-~~~~~~~~~~la~~~~-~v~~~~GiHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 105 (301)
T 2xio_A 28 DLQDVIGRAVEIGVKKFMITGG-NLQDSKDALHLAQTNG-MFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVV 105 (301)
T ss_dssp CHHHHHHHHHHHTEEEEEECCC-SHHHHHHHHHHHTTCT-TEEEEECCCGGGTHHHHHHCHHHHHHHHHHHHHTCTTTEE
T ss_pred CHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHHCC-CEEEEEEECcChhhhCcccccHHHHHHHHHHHhcCCCCeE
Confidence 4455546777899998888744 6788888877765532 22211112 11 1334555555543322334
Q ss_pred eCCcccCCCCc-h-hHHHHH----HHHHHHHHHcCCCeEEeh
Q 010443 263 ARGDLGMEIPV-E-KIFLAQ----KMMIYKCNLVGKPVVTAT 298 (510)
Q Consensus 263 grgDLg~e~~~-~-~v~~~q----k~ii~~~~~~gkpvivaT 298 (510)
|=|..|++... . .-...| +..++.|++.|+|+++-|
T Consensus 106 aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~ 147 (301)
T 2xio_A 106 AIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHC 147 (301)
T ss_dssp EEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEE
T ss_pred EEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 44677776633 1 112344 466788999999999865
No 261
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=44.41 E-value=40 Score=33.85 Aligned_cols=57 Identities=16% Similarity=0.246 Sum_probs=37.7
Q ss_pred CCCCCHHHHHHHHHhCCCeEEEeecCCCH---------HHHHHHHHHHHHHHHhcCCcEEEEecCCCC
Q 010443 30 PASRSVPMLEKLLRAGMNVARFNFSHGTH---------EYQQETLNNLRAAMHNTQILCAVMLDTKGP 88 (510)
Q Consensus 30 p~~~~~~~l~~li~~G~~~~RiN~sh~~~---------~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 88 (510)
+.....+.++.|-+.|+|++||-++.... +...+.++.+=+.+.+.| +.+++|+-..
T Consensus 59 ~~~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~G--i~vild~H~~ 124 (380)
T 1edg_A 59 GIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNK--MYVILNTHHD 124 (380)
T ss_dssp CSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTT--CEEEEECCSC
T ss_pred CCcccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCC--CEEEEeCCCc
Confidence 33457889999999999999998865421 223334444444455556 5678888754
No 262
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=44.38 E-value=50 Score=33.99 Aligned_cols=55 Identities=9% Similarity=0.237 Sum_probs=38.4
Q ss_pred cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHc-CC-ceEEe
Q 010443 257 TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD-GT-DCVML 331 (510)
Q Consensus 257 ~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~-G~-D~imL 331 (510)
.|.+=||-+|+.- ++ +++++.+.|||+|+.|-|- |-+|+...++++.. |. +-++|
T Consensus 135 vd~~KIgS~~~~N------~p-----LL~~va~~gKPViLStGma---------Tl~Ei~~Ave~i~~~Gn~~iiLl 191 (385)
T 1vli_A 135 PSAFKIASYEINH------LP-----LLKYVARLNRPMIFSTAGA---------EISDVHEAWRTIRAEGNNQIAIM 191 (385)
T ss_dssp CSCEEECGGGTTC------HH-----HHHHHHTTCSCEEEECTTC---------CHHHHHHHHHHHHTTTCCCEEEE
T ss_pred CCEEEECcccccC------HH-----HHHHHHhcCCeEEEECCCC---------CHHHHHHHHHHHHHCCCCcEEEE
Confidence 5788888777642 22 3555667899999988752 56889888887764 65 55555
No 263
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=43.85 E-value=65 Score=31.82 Aligned_cols=94 Identities=10% Similarity=0.090 Sum_probs=59.5
Q ss_pred hccCcCCCCEEEEcCC------CCHHHHHHH-HHHhccCCCCceEEEEe---cCHHHHhchHHHHhh-c-CeeEEeCCcc
Q 010443 200 RWGVPNNIDMIALSFV------RKGSDLVNV-RKVLGPHAKNIQLMSKV---ENQEGVVNFDDILRE-T-DSFMVARGDL 267 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV------~sa~dv~~v-r~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-~-DgI~IgrgDL 267 (510)
++.++.|+|+|++.-. -|.++=.++ +..++..+.++.+|+-+ -|.++++......+. . ||+|+-+-.+
T Consensus 35 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y 114 (311)
T 3h5d_A 35 EHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYY 114 (311)
T ss_dssp HHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCC
Confidence 7888999999886432 233333333 34444445678899888 367777777776665 4 9999986444
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 268 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 268 g~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.- .+.+.+...-+.| |.+.+.|+++-
T Consensus 115 ~~-~s~~~l~~~f~~v---a~a~~lPiilY 140 (311)
T 3h5d_A 115 NK-PSQEGMYQHFKAI---ADASDLPIIIY 140 (311)
T ss_dssp SC-CCHHHHHHHHHHH---HHSCSSCEEEE
T ss_pred CC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 22 2334444444444 45568999875
No 264
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=43.80 E-value=2.4e+02 Score=27.56 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=25.4
Q ss_pred HHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEE
Q 010443 390 ANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 390 A~~~~a~aIvv~T~sG~tA~~iSr~RP~~PIiav 423 (510)
..+.+|.+||+--..-..++.+++-= .+|++.+
T Consensus 188 ~~eAGA~~ivlE~vp~~~a~~it~~l-~iP~igI 220 (281)
T 1oy0_A 188 VAEAGAFAVVMEMVPAELATQITGKL-TIPTVGI 220 (281)
T ss_dssp HHHHTCSEEEEESCCHHHHHHHHHHC-SSCEEEE
T ss_pred HHHcCCcEEEEecCCHHHHHHHHHhC-CCCEEEe
Confidence 34569999999776656688887764 4999998
No 265
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=43.72 E-value=54 Score=33.20 Aligned_cols=116 Identities=13% Similarity=0.070 Sum_probs=62.1
Q ss_pred cCCCCEEEEcCC-----------CCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHh------hcCeeEEe---
Q 010443 204 PNNIDMIALSFV-----------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR------ETDSFMVA--- 263 (510)
Q Consensus 204 ~~g~d~I~~sfV-----------~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~------~~DgI~Ig--- 263 (510)
+.|+|+|-+.+- .+++.+.++-+.+++. .++.|++||=---..+++.++++ .+|+|.+-
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~-~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~ 231 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEV-YPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSI 231 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHH-CCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHh-hCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEeccc
Confidence 357899887653 3455555555545433 35789999953222333444443 25777641
Q ss_pred -CC---cc---------cCCCC-c--hhH-HHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcC
Q 010443 264 -RG---DL---------GMEIP-V--EKI-FLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDG 325 (510)
Q Consensus 264 -rg---DL---------g~e~~-~--~~v-~~~qk~ii~~~~~~-gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G 325 (510)
+| |+ ....+ + +.+ +...+.+-+..++. ..|+|...-+. | ..|+..++..|
T Consensus 232 ~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~---------s---~~da~~~l~aG 299 (354)
T 4ef8_A 232 GNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVY---------T---GEDAFLHVLAG 299 (354)
T ss_dssp EEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCC---------S---HHHHHHHHHHT
T ss_pred CcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEECCcC---------C---HHHHHHHHHcC
Confidence 11 10 00110 1 122 33444443333343 47887654432 2 35778888899
Q ss_pred CceEEec
Q 010443 326 TDCVMLS 332 (510)
Q Consensus 326 ~D~imLs 332 (510)
+|+||+.
T Consensus 300 Ad~V~vg 306 (354)
T 4ef8_A 300 ASMVQVG 306 (354)
T ss_dssp EEEEEEC
T ss_pred CCEEEEh
Confidence 9999996
No 266
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=43.58 E-value=62 Score=32.67 Aligned_cols=76 Identities=18% Similarity=0.217 Sum_probs=45.6
Q ss_pred cccccccccCCCCCCCCCeEEEEecCCC---CCCHHHHHHHHHhCCCeEEEeecC--CCHHHHHHHHHHHHHHHHhcCCc
Q 010443 4 IDIEGLLRDVPNDKRLPKTKIVCTLGPA---SRSVPMLEKLLRAGMNVARFNFSH--GTHEYQQETLNNLRAAMHNTQIL 78 (510)
Q Consensus 4 ~~~~~~~~~~p~~~~~~~tkIi~TiGp~---~~~~~~l~~li~~G~~~~RiN~sh--~~~~~~~~~i~~ir~~~~~~~~~ 78 (510)
.-+.++|+.... .+...-+++++. ..-.+..+++.+.|.+.+.|++.| ++.++-.+.++.+|++. |.-
T Consensus 121 ~Pv~~LLGg~~r----~~v~~y~~~~~~~~~e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~---g~~ 193 (374)
T 3sjn_A 121 VPVHTLLGGKYR----DKIRCYGTFIPADKPEDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAA---GPE 193 (374)
T ss_dssp SBHHHHTTCCSC----SEEEEEEEECCCSSGGGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHH---CSS
T ss_pred CcHHHHcCCCcC----CceeEEeccCCCCCHHHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHh---CCC
Confidence 345567774321 122222444433 223456777888999999999997 36777667777777654 333
Q ss_pred EEEEecCC
Q 010443 79 CAVMLDTK 86 (510)
Q Consensus 79 v~i~~Dl~ 86 (510)
+.|++|..
T Consensus 194 ~~l~vDan 201 (374)
T 3sjn_A 194 MEVQIDLA 201 (374)
T ss_dssp SEEEEECT
T ss_pred CeEEEECC
Confidence 45555543
No 267
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=43.47 E-value=73 Score=28.94 Aligned_cols=65 Identities=6% Similarity=0.026 Sum_probs=38.7
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEE--ecCHHHHhchHHHHhh-cCeeEEeCCcccC
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSK--VENQEGVVNFDDILRE-TDSFMVARGDLGM 269 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~Iiak--IEt~~av~nldeI~~~-~DgI~IgrgDLg~ 269 (510)
..+.+.|+|+|.+ |-.....+..++++.+....++.+++- | ..+|+.++++. +||+.+|++=+..
T Consensus 115 ~~a~~~G~d~v~v-~~t~~~g~~~~~~l~~~~~~~ipvia~GGI----~~~~i~~~~~~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 115 FTALEAGAQALKI-FPSSAFGPQYIKALKAVLPSDIAVFAVGGV----TPENLAQWIDAGCAGAGLGSDLYRA 182 (212)
T ss_dssp HHHHHTTCSEEEE-TTHHHHCHHHHHHHHTTSCTTCEEEEESSC----CTTTHHHHHHHTCSEEEECTTTCCT
T ss_pred HHHHHCCCCEEEE-ecCCCCCHHHHHHHHHhccCCCeEEEeCCC----CHHHHHHHHHcCCCEEEEChHHhCC
Confidence 3456789999987 322223344444444333224565542 3 14677777776 8999999765443
No 268
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=43.36 E-value=29 Score=32.21 Aligned_cols=77 Identities=12% Similarity=0.194 Sum_probs=46.4
Q ss_pred EEecCCCEEEEEecC----CCCCCccEEecCCCCccc--cCCCCCEEEEe--CCeEEEEEEEEeCCCCeEEEEEeeCeEe
Q 010443 101 IQLKEGQEITVSTDY----DFKGNEEMITMSYKKLPV--DVKPGNTILCA--DGTITLTVLSCDPKSGTVRCRCENTAML 172 (510)
Q Consensus 101 i~l~~G~~v~l~~~~----~~~~~~~~i~v~~~~~~~--~v~~gd~i~id--DG~i~l~V~~~~~~~~~i~~~v~~~G~l 172 (510)
+-.+.|++++|+... ..........++-..|.. .+++|+.+.+. +|.+..+|++++ ++.++ +.-+.-|
T Consensus 50 ~Gm~vGe~~~v~Ippe~aYGe~~~~lV~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~--~~~V~--vD~NHPL 125 (196)
T 2kfw_A 50 EGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVE--DDHVV--VDGNHML 125 (196)
T ss_dssp SSSCTTCEEEEECSTTTTSSCCCTTTCEEECGGGCCCSSCCCTTCEEEEEETTEEEEEEBCCCC--SSSEE--ECCCCTT
T ss_pred cCCCCCCEEEEEeCcHHhcCCCChhhEEEEEHHHCCCccCcccCCEEEEECCCCcEEEEEEEEc--CCEEE--EeCCCCC
Confidence 346799999988762 223334455566555553 58999999987 566667788774 44443 3333333
Q ss_pred cCCCCcccCC
Q 010443 173 GERKNVNLPG 182 (510)
Q Consensus 173 ~s~K~vnlp~ 182 (510)
..|.++|--
T Consensus 126 -AGk~L~F~v 134 (196)
T 2kfw_A 126 -AGQNLKFNV 134 (196)
T ss_dssp -SCCCCEEEE
T ss_pred -CCCeEEEEE
Confidence 334454443
No 269
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=43.30 E-value=1.2e+02 Score=29.40 Aligned_cols=117 Identities=12% Similarity=0.103 Sum_probs=69.4
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.++.+- .|..+....+...-..|++.+...++. . ..++.+...++..+-...+++
T Consensus 76 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~---~-~~~~~~~a~~~~~~~~~~~~~ 140 (316)
T 1y7l_A 76 ALAYVAAARGYKITLT-----------MPETMSLERKRLLCGLGVNLVLTEGAK---G-MKGAIAKAEEIVASDPSRYVM 140 (316)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHCTTTEEC
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEeCCCC---C-HHHHHHHHHHHHHhCCCCEEE
Confidence 4667788999998763 132222334556666899987765431 1 235666555554432221011
Q ss_pred HHHHHHHHhcCCCCCCch--HH-HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hC-CCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPL--ES-LASSAVRTANKAR--AKLIVVLTRGGTTAKLVAK----YR-PAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~--~~-ia~~av~~A~~~~--a~aIvv~T~sG~tA~~iSr----~R-P~~PIiav 423 (510)
-..| .++. .+ -...+.++.++++ .+.||+.+-+|.++.-+++ +. |...|+++
T Consensus 141 ~~~~----------~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~v 202 (316)
T 1y7l_A 141 LKQF----------ENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAV 202 (316)
T ss_dssp CCTT----------TCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEE
T ss_pred CCCC----------CCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEE
Confidence 0000 1121 11 2334577777775 6899999999999777665 34 99999999
No 270
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=42.35 E-value=86 Score=34.99 Aligned_cols=102 Identities=16% Similarity=0.150 Sum_probs=72.4
Q ss_pred ChhcHHHHHhccCcCCCCEEEE-------------------cCCCCH--HHHHHHHHHhccCCCCceEEEEecCHHHHh-
Q 010443 191 TEKDKEDILRWGVPNNIDMIAL-------------------SFVRKG--SDLVNVRKVLGPHAKNIQLMSKVENQEGVV- 248 (510)
Q Consensus 191 t~~D~~di~~~a~~~g~d~I~~-------------------sfV~sa--~dv~~vr~~l~~~~~~~~IiakIEt~~av~- 248 (510)
++.-++-| .||.++|.++|.+ +|++-- -|+.+|.+|.+++ .+.|+.-.|+..++.
T Consensus 370 te~~K~YI-DFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sK--GV~iilw~~t~~~~~n 446 (738)
T 2d73_A 370 TANVKRYI-DFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARK--GIKMMMHHETSASVRN 446 (738)
T ss_dssp HHHHHHHH-HHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHT--TCEEEEEEECTTBHHH
T ss_pred HHHHHHHH-HHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhC--CCEEEEEEcCCCchhh
Confidence 55567788 9999999999999 121111 2489999999875 589999999987544
Q ss_pred ---chHHHHhh-----cCeeEEeC-CcccCCCCc----hhHHHHHHHHHHHHHHcCCCeEE
Q 010443 249 ---NFDDILRE-----TDSFMVAR-GDLGMEIPV----EKIFLAQKMMIYKCNLVGKPVVT 296 (510)
Q Consensus 249 ---nldeI~~~-----~DgI~Igr-gDLg~e~~~----~~v~~~qk~ii~~~~~~gkpviv 296 (510)
++|+.++. ..||-++= ||+ ++-+- +.+.....++++.|.+++.-|..
T Consensus 447 ~e~~~d~~f~~~~~~Gv~GVKvdF~g~~-~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnf 506 (738)
T 2d73_A 447 YERHMDKAYQFMADNGYNSVKSGYVGNI-IPRGEHHYGQWMNNHYLYAVKKAADYKIMVNA 506 (738)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECCSSC-BSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEeCccccC-cCCcccccchHHHHHHHHHHHHHHHcCcEEEc
Confidence 45555554 46887762 231 12222 46777888999999999988876
No 271
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=42.00 E-value=1.6e+02 Score=28.61 Aligned_cols=105 Identities=10% Similarity=0.078 Sum_probs=70.4
Q ss_pred HHHhccCcCCCCEEEE-----cCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHh---chHHHHhh-cCeeEEeCCcc
Q 010443 197 DILRWGVPNNIDMIAL-----SFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVV---NFDDILRE-TDSFMVARGDL 267 (510)
Q Consensus 197 di~~~a~~~g~d~I~~-----sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~---nldeI~~~-~DgI~IgrgDL 267 (510)
.+.+...+.|++.|.+ -|-.+.+++..+++.. +++|+.| +.+- .+++.... +|+|++.-.+|
T Consensus 83 ~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v-----~lPVl~K----dfi~d~~qi~ea~~~GAD~VlLi~a~L 153 (272)
T 3tsm_A 83 ALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQAC-----SLPALRK----DFLFDPYQVYEARSWGADCILIIMASV 153 (272)
T ss_dssp HHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTS-----SSCEEEE----SCCCSTHHHHHHHHTTCSEEEEETTTS
T ss_pred HHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhc-----CCCEEEC----CccCCHHHHHHHHHcCCCEEEEccccc
Confidence 3434446789999988 3558999999998765 4667665 1222 23343333 79999987766
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 268 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 268 g~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
. . .--+.++..|+..|.-+++-++ |.+| +..|...|+|.|-.+
T Consensus 154 ~----~----~~l~~l~~~a~~lGl~~lvevh-----------~~eE---l~~A~~~ga~iIGin 196 (272)
T 3tsm_A 154 D----D----DLAKELEDTAFALGMDALIEVH-----------DEAE---MERALKLSSRLLGVN 196 (272)
T ss_dssp C----H----HHHHHHHHHHHHTTCEEEEEEC-----------SHHH---HHHHTTSCCSEEEEE
T ss_pred C----H----HHHHHHHHHHHHcCCeEEEEeC-----------CHHH---HHHHHhcCCCEEEEC
Confidence 2 1 2346778889999998887543 3343 456778899987665
No 272
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=41.84 E-value=1.7e+02 Score=28.47 Aligned_cols=114 Identities=17% Similarity=0.169 Sum_probs=66.3
Q ss_pred HHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccchH
Q 010443 283 MIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYR 362 (510)
Q Consensus 283 ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~ 362 (510)
+..+|+..|.++.+-. |....-..+...-..|++.+...+ .| .++.+...++..+ +..+ |-
T Consensus 69 lA~~a~~~G~~~~i~~-----------p~~~~~~k~~~~~~~Ga~V~~~~~-----~~-~~~~~~a~~~~~~-~~~~-~~ 129 (318)
T 2rkb_A 69 AAYAARKLGIPATIVL-----------PESTSLQVVQRLQGEGAEVQLTGK-----VW-DEANLRAQELAKR-DGWE-NV 129 (318)
T ss_dssp HHHHHHHHTCCEEEEE-----------CTTCCHHHHHHHHHTTCEEEECCS-----SH-HHHHHHHHHHHHS-TTEE-EC
T ss_pred HHHHHHHcCCCEEEEE-----------CCCCcHHHHHHHHhcCCEEEEECC-----CH-HHHHHHHHHHHHh-cCCE-Ee
Confidence 5677899999987631 222222344555667998776432 23 4566555554432 1111 10
Q ss_pred HHHHHHHhcCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHhh-----CCCCcEEEE
Q 010443 363 AVFKEMIRSTPLPMSPLESLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAKY-----RPAVPILSV 423 (510)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a~aIvv~T~sG~tA~~iSr~-----RP~~PIiav 423 (510)
..| ..| .....-...+.++.++++ .+.||+.+-+|.++.-++++ .|...|+++
T Consensus 130 ~~~-------~n~-~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~v 189 (318)
T 2rkb_A 130 PPF-------DHP-LIWKGHASLVQELKAVLRTPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAM 189 (318)
T ss_dssp CSS-------CSH-HHHHHHHHHHHHHHHHSSSCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEE
T ss_pred CCC-------CCh-hhccchhHHHHHHHHhcCCCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEE
Confidence 000 000 112223345567777774 69999999999997776653 288999999
No 273
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=41.77 E-value=25 Score=34.18 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=27.3
Q ss_pred HHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHH
Q 010443 316 TDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIE 354 (510)
Q Consensus 316 ~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~ 354 (510)
.|+..+...|+|++++..--.....|.++++.+.+.+.+
T Consensus 222 e~i~~~~~aGadgvvvGsai~~~~dp~~~~~~l~~~i~~ 260 (297)
T 2zbt_A 222 ADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIVRAVAH 260 (297)
T ss_dssp HHHHHHHHTTCSEEEECGGGGGSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEchHHhCCCCHHHHHHHHHHHHHH
Confidence 466677778999999974433334688888888776543
No 274
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=41.65 E-value=46 Score=27.61 Aligned_cols=42 Identities=17% Similarity=0.230 Sum_probs=33.5
Q ss_pred HHHHHHHH-HHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 010443 381 SLASSAVR-TANKARAKLIVVLTR---------GGTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 381 ~ia~~av~-~A~~~~a~aIvv~T~---------sG~tA~~iSr~RP~~PIiav 423 (510)
..+...++ .|.+.+++.||+-++ -|.++..+.+.-| |||+.+
T Consensus 94 ~~~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 145 (146)
T 3s3t_A 94 IPKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAP-CNVIVI 145 (146)
T ss_dssp CHHHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHCS-SEEEEE
T ss_pred ChHHHHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccCC-CCEEEe
Confidence 35666778 888999999998875 4678888888765 999987
No 275
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=41.54 E-value=52 Score=28.26 Aligned_cols=42 Identities=24% Similarity=0.312 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 010443 381 SLASSAVRTANKARAKLIVVLTR---------GGTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 381 ~ia~~av~~A~~~~a~aIvv~T~---------sG~tA~~iSr~RP~~PIiav 423 (510)
..+...++.|.+.+++.||+-++ -|.++..+.+.-| |||+.+
T Consensus 104 ~~~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~~-~PVlvv 154 (170)
T 2dum_A 104 IPWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTK-KPVLII 154 (170)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHCS-SCEEEE
T ss_pred ChHHHHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhCC-CCEEEE
Confidence 35666778899999999999876 3567888887754 999999
No 276
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=41.19 E-value=68 Score=32.49 Aligned_cols=96 Identities=15% Similarity=0.187 Sum_probs=53.5
Q ss_pred CCHHHHHHHHHHhccCCCCceEEEE-ecCHHHHhchHHHHhh-cCeeEEeC-CcccCCCCchhHHHHHHHHHHHHHHcCC
Q 010443 216 RKGSDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRE-TDSFMVAR-GDLGMEIPVEKIFLAQKMMIYKCNLVGK 292 (510)
Q Consensus 216 ~sa~dv~~vr~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-~DgI~Igr-gDLg~e~~~~~v~~~qk~ii~~~~~~gk 292 (510)
-+.++++.+++.. +..++.| +-++ +......+. +|+|.+.- |-=..+.+...+ ..-.++.++. ....
T Consensus 216 ~~~~~i~~lr~~~-----~~PvivK~v~~~---e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~-~~l~~v~~~v-~~~i 285 (368)
T 2nli_A 216 ISPRDIEEIAGHS-----GLPVFVKGIQHP---EDADMAIKRGASGIWVSNHGARQLYEAPGSF-DTLPAIAERV-NKRV 285 (368)
T ss_dssp CCHHHHHHHHHHS-----SSCEEEEEECSH---HHHHHHHHTTCSEEEECCGGGTSCSSCCCHH-HHHHHHHHHH-TTSS
T ss_pred hhHHHHHHHHHHc-----CCCEEEEcCCCH---HHHHHHHHcCCCEEEEcCCCcCCCCCCCChH-HHHHHHHHHh-CCCC
Confidence 3577888888765 3577777 3333 223333333 79999941 110012222222 1222222222 1258
Q ss_pred CeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 293 PVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 293 pvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
|+|....+- --.|+..++..|+|++|+..
T Consensus 286 pVia~GGI~------------~g~D~~kalalGAd~V~iGr 314 (368)
T 2nli_A 286 PIVFDSGVR------------RGEHVAKALASGADVVALGR 314 (368)
T ss_dssp CEEECSSCC------------SHHHHHHHHHTTCSEEEECH
T ss_pred eEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 998755432 24688999999999999973
No 277
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=41.19 E-value=1.4e+02 Score=30.04 Aligned_cols=60 Identities=12% Similarity=0.119 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHcCCCeEEehhhhHhhhc---C-CCC---------ChHhHHHH-HHHHHcCCceEEeccCCCC
Q 010443 278 LAQKMMIYKCNLVGKPVVTATQMLESMIK---S-PRP---------TRAEATDV-ANAVLDGTDCVMLSGESAA 337 (510)
Q Consensus 278 ~~qk~ii~~~~~~gkpvivaTqmLeSM~~---~-~~P---------traEv~Dv-~~av~~G~D~imLs~Eta~ 337 (510)
..-..+.++|+++|.|.++.|+.-.++.. . |.| ++....++ ..+...|++++.++-++..
T Consensus 88 ~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~ 161 (370)
T 1gox_A 88 EGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (370)
T ss_dssp THHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSS
T ss_pred hHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 44467889999999999987554332222 1 211 23222222 3356789999999988754
No 278
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=41.17 E-value=95 Score=28.76 Aligned_cols=41 Identities=10% Similarity=0.089 Sum_probs=30.8
Q ss_pred cHHHHHhccCcCCCCEEEEcCC-----CCHHHHHHHHHHhccCCCC
Q 010443 194 DKEDILRWGVPNNIDMIALSFV-----RKGSDLVNVRKVLGPHAKN 234 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~sfV-----~sa~dv~~vr~~l~~~~~~ 234 (510)
+..+..+.+.+.|+|+|=+... .+.+++.++++.+++.|-.
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~ 76 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVT 76 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCe
Confidence 3334437788999999987743 3688899999999887643
No 279
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=41.13 E-value=51 Score=27.21 Aligned_cols=42 Identities=21% Similarity=0.293 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcC--------CchHHHHHHhhCCCCcEEEE
Q 010443 381 SLASSAVRTANKARAKLIVVLTR--------GGTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 381 ~ia~~av~~A~~~~a~aIvv~T~--------sG~tA~~iSr~RP~~PIiav 423 (510)
..+...++.|.+.+++.||+-++ -|.++..+.+. -+|||+.+
T Consensus 93 ~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~v~~~-~~~pVlvv 142 (143)
T 3fdx_A 93 SPKDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRH-AECSVLVV 142 (143)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESSCTTCCSCSSCHHHHHHHHH-CSSEEEEE
T ss_pred ChHHHHHHHHHHhCCCEEEEeCCCCCCeeeeeccHHHHHHHh-CCCCEEEe
Confidence 45666778899999999999885 36778888775 45999987
No 280
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=40.89 E-value=46 Score=28.88 Aligned_cols=41 Identities=27% Similarity=0.295 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 010443 382 LASSAVRTANKARAKLIVVLTR---------GGTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 382 ia~~av~~A~~~~a~aIvv~T~---------sG~tA~~iSr~RP~~PIiav 423 (510)
.+...++.|.+.+++.||+-++ -|.++..+.+.- +|||+.+
T Consensus 107 ~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a-~~PVlvV 156 (163)
T 1tq8_A 107 PVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRA-KVDVLIV 156 (163)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHT-TCEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhC-CCCEEEE
Confidence 4556677888999999999886 256677777765 4999999
No 281
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=40.89 E-value=54 Score=32.90 Aligned_cols=54 Identities=15% Similarity=0.132 Sum_probs=35.7
Q ss_pred CCCHHHHHHHHHhCCCeEEEeecCCC-----H-----HHHHHHHHHHHHHHHhcCCcEEEEecCCC
Q 010443 32 SRSVPMLEKLLRAGMNVARFNFSHGT-----H-----EYQQETLNNLRAAMHNTQILCAVMLDTKG 87 (510)
Q Consensus 32 ~~~~~~l~~li~~G~~~~RiN~sh~~-----~-----~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 87 (510)
..+.+.++.|-+.|+|++||-++... . +...+.++.+=+.+.+.| +.+++|+-.
T Consensus 62 ~~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~G--i~vildlH~ 125 (376)
T 3ayr_A 62 KTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNG--AFVILNLHH 125 (376)
T ss_dssp CCCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEEECCS
T ss_pred cCcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEECCC
Confidence 34688999999999999999887531 1 122333444444455555 567888875
No 282
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=40.86 E-value=64 Score=32.69 Aligned_cols=62 Identities=13% Similarity=0.140 Sum_probs=40.8
Q ss_pred CeEEEEecCCCCCCHH----HHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEEEecC
Q 010443 21 KTKIVCTLGPASRSVP----MLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDT 85 (510)
Q Consensus 21 ~tkIi~TiGp~~~~~~----~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 85 (510)
+....+|+|....+++ ..+++.+.|.+.+.|++.|++.++-.+.++.+|++ .|.-+.|++|.
T Consensus 132 ~vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a---~G~~~~l~vDa 197 (389)
T 2oz8_A 132 RVKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTC---VPAGSKVMIDP 197 (389)
T ss_dssp EEEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTT---SCTTCEEEEEC
T ss_pred ceEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHh---hCCCCeEEEEC
Confidence 4566677654222443 44667889999999999998887766677777664 33334455555
No 283
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=40.64 E-value=2e+02 Score=27.87 Aligned_cols=90 Identities=17% Similarity=0.161 Sum_probs=55.8
Q ss_pred cCeeEEe--CCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEecc
Q 010443 257 TDSFMVA--RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 333 (510)
Q Consensus 257 ~DgI~Ig--rgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~ 333 (510)
+||+++. -|+. ..+..++-..+-+..++.++ -..|+++-| ...+-+|..+.+. |-..|+|++|+..
T Consensus 42 v~gl~~~GttGE~-~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 42 TDGIVAVGTTGES-ATLSVEEHTAVIEAVVKHVA-KRVPVIAGT---------GANNTVEAIALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp CCEEEESSTTTTG-GGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEeCccccCc-ccCCHHHHHHHHHHHHHHhC-CCCcEEEeC---------CCcCHHHHHHHHHHHHHcCCCEEEECC
Confidence 7999985 1222 33444554444455554443 246887643 2455666666554 6678999999975
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhc
Q 010443 334 ESAAGAYPEIAVKIMRRICIEAES 357 (510)
Q Consensus 334 Eta~G~yP~~~V~~m~~i~~~aE~ 357 (510)
=--...-+.+.++..+.|+..+.-
T Consensus 111 P~y~~~~~~~l~~~f~~va~a~~l 134 (297)
T 3flu_A 111 PYYNKPSQEGIYQHFKTIAEATSI 134 (297)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCC
Confidence 443333356788888888887753
No 284
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=40.54 E-value=94 Score=30.85 Aligned_cols=31 Identities=26% Similarity=0.501 Sum_probs=22.8
Q ss_pred CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 291 GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 291 gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
+.|+|...-+ -| -.|+..++..|||++++..
T Consensus 251 ~ipvia~GGI---------~~---~~d~~k~l~~GAd~V~iG~ 281 (349)
T 1p0k_A 251 ASTMIASGGL---------QD---ALDVAKAIALGASCTGMAG 281 (349)
T ss_dssp TSEEEEESSC---------CS---HHHHHHHHHTTCSEEEECH
T ss_pred CCeEEEECCC---------CC---HHHHHHHHHcCCCEEEEcH
Confidence 6888875432 22 4577888889999999974
No 285
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=40.39 E-value=57 Score=32.81 Aligned_cols=47 Identities=15% Similarity=0.180 Sum_probs=34.3
Q ss_pred HHHHHHHHhCCCeEEEeecCC------CHHHHHHHHHHHHHHHHhcCCcEEEEecC
Q 010443 36 PMLEKLLRAGMNVARFNFSHG------THEYQQETLNNLRAAMHNTQILCAVMLDT 85 (510)
Q Consensus 36 ~~l~~li~~G~~~~RiN~sh~------~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 85 (510)
+..+++.+.|.+.+.|++.|+ ..+.-.++++.+|++. |.-+.|++|.
T Consensus 155 ~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~---g~d~~l~vDa 207 (382)
T 1rvk_A 155 RFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAV---GPDIRLMIDA 207 (382)
T ss_dssp HHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHH---CTTSEEEEEC
T ss_pred HHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHh---CCCCeEEEEC
Confidence 345667889999999999997 6777777888888764 3334455555
No 286
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=40.31 E-value=41 Score=32.84 Aligned_cols=97 Identities=9% Similarity=0.079 Sum_probs=57.7
Q ss_pred HHHhccCcCCCCEEEEc------CCCCHHHHHHHHH-HhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCC
Q 010443 197 DILRWGVPNNIDMIALS------FVRKGSDLVNVRK-VLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARG 265 (510)
Q Consensus 197 di~~~a~~~g~d~I~~s------fV~sa~dv~~vr~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~Igrg 265 (510)
.+.++.++.|+|++++. +.-|.++=.++-+ ..+..+.++++|+-+= |.++++......+. +|++|+-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTP 105 (292)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 33377889999999863 2334444444433 3434445788999884 36666655554443 699998755
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 266 DLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 266 DLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.+.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 106 ~y~~-~s~~~l~~~f~~i---a~a~~lPiilY 133 (292)
T 2ojp_A 106 YYNR-PSQEGLYQHFKAI---AEHTDLPQILY 133 (292)
T ss_dssp CSSC-CCHHHHHHHHHHH---HTTCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 4422 2334444444444 44557898874
No 287
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=40.28 E-value=1.5e+02 Score=31.20 Aligned_cols=96 Identities=14% Similarity=0.148 Sum_probs=57.5
Q ss_pred cEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEeeCeEecCCCCcccCCcc------c----------
Q 010443 122 EMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVV------V---------- 185 (510)
Q Consensus 122 ~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~i~~~v~~~G~l~s~K~vnlp~~~------~---------- 185 (510)
+.|++|.-.+--. .+-++++.+.++|.. +..+ -.+-|.--++..+++|..- +
T Consensus 130 ~~IlidDG~i~l~-----V~~~~~~~v~~~V~~----gG~L---~~~KgvNlPg~~~~lp~lTekD~~dl~~~~~~~~~v 197 (461)
T 3qtg_A 130 DVILMLDGRLRLK-----VTNTGSDWIEAVAES----SGVI---TGGKAIVVEGKDYDISTPAEEDVEALKAISPIRDNI 197 (461)
T ss_dssp CEEEEGGGTEEEE-----EEEECSSEEEEEESS----CEEE---CTTCBEEETTCCCCCCSSCHHHHHHHHHHGGGGGGC
T ss_pred CEEEEeCCEEEEE-----EEEEECCEEEEEEEE----CCEe---cCCCceecCCCCCCCCCCCHHHHHHHHHHHHhhcCC
Confidence 4577765443211 133566777777741 2222 1233455566677776521 1
Q ss_pred ---cCC-CCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhc
Q 010443 186 ---DLP-TLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLG 229 (510)
Q Consensus 186 ---~lp-~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~ 229 (510)
-+| .=+..|...+.++.-+.|.+.-+++++++++-++.+.+++.
T Consensus 198 D~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~ 245 (461)
T 3qtg_A 198 DYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQ 245 (461)
T ss_dssp CEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHH
T ss_pred CEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHH
Confidence 112 12577888875555567777888999999999999988763
No 288
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=40.28 E-value=1.3e+02 Score=28.99 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=68.3
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.++.+- .|.......+...-..|++.+....+ |. ..++.+...+++++.+.. |
T Consensus 75 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~Ga~v~~~~~~---~~-~~~~~~~a~~~~~~~~~~--~ 137 (303)
T 2v03_A 75 ALAMIAALKGYRMKLL-----------MPDNMSQERRAAMRAYGAELILVTKE---QG-MEGARDLALEMANRGEGK--L 137 (303)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTT---TH-HHHHHHHHHHHHHTTSCE--E
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCC---CC-HHHHHHHHHHHHHhCCCc--c
Confidence 4567788999998763 13222233445566679998777642 12 334555555544332221 1
Q ss_pred HHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPLESLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~--a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
...| ..|.....--...+.++.++++ .+.||+.+-+|.++.-+++ ..|...|+++
T Consensus 138 ~~~~-------~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigv 198 (303)
T 2v03_A 138 LDQF-------NNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGL 198 (303)
T ss_dssp CCTT-------TCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEE
T ss_pred cCCc-------CChhhHHHhcCCcHHHHHHHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEE
Confidence 1001 1111011012234567777774 6999999999999777665 4689999999
No 289
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=40.20 E-value=1.4e+02 Score=28.94 Aligned_cols=96 Identities=8% Similarity=-0.039 Sum_probs=57.2
Q ss_pred HHHhccCcCCCCEEEEc------CCCCHHHHHHHHHHhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCCc
Q 010443 197 DILRWGVPNNIDMIALS------FVRKGSDLVNVRKVLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGD 266 (510)
Q Consensus 197 di~~~a~~~g~d~I~~s------fV~sa~dv~~vr~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~IgrgD 266 (510)
.+.++.++.|+|++++. +.-|.++=.++-+...+.-.. +|+-+= |.++++......+. +|++|+-+-.
T Consensus 24 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 101 (293)
T 1w3i_A 24 IHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPY 101 (293)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 33378889999998873 334455555554444433223 888873 46666655554444 6999987554
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 267 LGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 267 Lg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
+.-..+.+.+...-+.| |.+.+.|+++.
T Consensus 102 y~~~~s~~~l~~~f~~v---a~a~~lPiilY 129 (293)
T 1w3i_A 102 YYPRMSEKHLVKYFKTL---CEVSPHPVYLY 129 (293)
T ss_dssp SCSSCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCCCHHHHHHHHHHH---HhhCCCCEEEE
Confidence 42212444555555555 45568999874
No 290
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=40.18 E-value=64 Score=31.82 Aligned_cols=112 Identities=15% Similarity=0.126 Sum_probs=72.2
Q ss_pred ccCcCCCCEEEEcCCCC--------------HHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCc
Q 010443 201 WGVPNNIDMIALSFVRK--------------GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGD 266 (510)
Q Consensus 201 ~a~~~g~d~I~~sfV~s--------------a~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgD 266 (510)
.+.+.|+.+|+-+..+. .+-++.++++..+. .+.+++-+-.++.++-+.+ .+|.+-||.++
T Consensus 43 ~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~--Glp~~tev~d~~~v~~l~~---~vd~lkIgA~~ 117 (288)
T 3tml_A 43 ICEKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQL--GLPVLTDVHSIDEIEQVAS---VVDVLQTPAFL 117 (288)
T ss_dssp HHHHHTCCEEEECBC--------------CHHHHHHHHHHHHHHH--CCCEEEECCSGGGHHHHHH---HCSEEEECGGG
T ss_pred HHHHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHH---hCCEEEECccc
Confidence 34455888888754332 35667777777554 5788888887777765544 48999999765
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHH-cCC------ceEEeccCCC
Q 010443 267 LGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVL-DGT------DCVMLSGESA 336 (510)
Q Consensus 267 Lg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~-~G~------D~imLs~Eta 336 (510)
+- ..+ +++++.+.||||++.|.|. -|-.|+...++.+. .|. +-++|..=++
T Consensus 118 ~~------n~~-----LLr~~a~~gkPVilK~G~~--------~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~ 175 (288)
T 3tml_A 118 CR------QTD-----FIHACARSGKPVNIKKGQF--------LAPHDMKNVIDKARDAAREAGLSEDRFMACERGV 175 (288)
T ss_dssp TT------CHH-----HHHHHHTSSSCEEEECCTT--------CCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCE
T ss_pred cc------CHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCC
Confidence 42 222 3445668999999977653 35567766666554 355 5577754333
No 291
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=40.17 E-value=41 Score=33.03 Aligned_cols=96 Identities=10% Similarity=0.040 Sum_probs=58.9
Q ss_pred HHhccCcCCCCEEEEc------CCCCHHHHHHH-HHHhccCCCCceEEEEe---cCHHHHhchHHHHhh-cCeeEEeCCc
Q 010443 198 ILRWGVPNNIDMIALS------FVRKGSDLVNV-RKVLGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARGD 266 (510)
Q Consensus 198 i~~~a~~~g~d~I~~s------fV~sa~dv~~v-r~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-~DgI~IgrgD 266 (510)
+.++.++.|+|+|++. +.=|.++=.++ +..++..+.++.+|+-+ -|.++++......+. +|++|+-+-.
T Consensus 30 lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 109 (300)
T 3eb2_A 30 LCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEA 109 (300)
T ss_dssp HHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred HHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 3367789999998743 22233333333 33333445678888877 467777777666665 7999987544
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 267 LGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 267 Lg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
+.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 110 y~~-~~~~~l~~~f~~v---a~a~~lPiilY 136 (300)
T 3eb2_A 110 YFP-LKDAQIESYFRAI---ADAVEIPVVIY 136 (300)
T ss_dssp SSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCC-CCHHHHHHHHHHH---HHHCCCCEEEE
Confidence 432 2344555444444 55568999875
No 292
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=39.65 E-value=89 Score=30.21 Aligned_cols=27 Identities=26% Similarity=0.384 Sum_probs=18.5
Q ss_pred CCCCeeEeeecCCCCcEEecCCCEEEE
Q 010443 85 TKGPEIRTGFLKDGKPIQLKEGQEITV 111 (510)
Q Consensus 85 l~Gp~iR~g~~~~~~~i~l~~G~~v~l 111 (510)
..||+.|+.-.+.-..-.|++|+.|.|
T Consensus 117 s~Gr~~~V~Vsp~Vd~e~LkPG~rVaL 143 (251)
T 3m9b_A 117 TSGRKMRLTCSPNIDAASLKKGQTVRL 143 (251)
T ss_dssp CSSSCCEECBCTTSCTTTSCSSCEEEE
T ss_pred eCCceEEEEeCCCCCHHHCCCCCEEEe
Confidence 478888885443211126899999998
No 293
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=39.63 E-value=82 Score=31.10 Aligned_cols=70 Identities=17% Similarity=0.210 Sum_probs=48.6
Q ss_pred CCeEEEEecCCCCC--C-----------HHHHHHHHHhCCCeEEEeecC--------CCHHHHHHHHHHHHHHHHhcCCc
Q 010443 20 PKTKIVCTLGPASR--S-----------VPMLEKLLRAGMNVARFNFSH--------GTHEYQQETLNNLRAAMHNTQIL 78 (510)
Q Consensus 20 ~~tkIi~TiGp~~~--~-----------~~~l~~li~~G~~~~RiN~sh--------~~~~~~~~~i~~ir~~~~~~~~~ 78 (510)
.+++|++-|.-.-+ + .+..++|++.|+++.=++.-. ...|+..+++..++...++.+.|
T Consensus 38 ~~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vp 117 (297)
T 1tx2_A 38 EKTLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLP 117 (297)
T ss_dssp SSCEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSC
T ss_pred CCCEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCce
Confidence 46899988854321 1 345678999999999999843 12577888887777777666655
Q ss_pred EEEEecCCCCeeE
Q 010443 79 CAVMLDTKGPEIR 91 (510)
Q Consensus 79 v~i~~Dl~Gp~iR 91 (510)
|.+|+.-|++-
T Consensus 118 --iSIDT~~~~V~ 128 (297)
T 1tx2_A 118 --ISIDTYKAEVA 128 (297)
T ss_dssp --EEEECSCHHHH
T ss_pred --EEEeCCCHHHH
Confidence 55688755544
No 294
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=39.56 E-value=1.9e+02 Score=28.44 Aligned_cols=90 Identities=18% Similarity=0.197 Sum_probs=56.1
Q ss_pred cCeeEEeCCcc--cCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEecc
Q 010443 257 TDSFMVARGDL--GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 333 (510)
Q Consensus 257 ~DgI~IgrgDL--g~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~ 333 (510)
.||+++. |-- +..+..++-..+.+..++.++. ..||++-| ...+-+|..+.+. |-..|+|++|+..
T Consensus 58 v~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGv---------g~~st~eai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 58 TNAIVAV-GTTGESATLDVEEHIQVIRRVVDQVKG-RIPVIAGT---------GANSTREAVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp CCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCcCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 7999985 221 1234445544555555555432 36887643 2445566666554 6678999999975
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhc
Q 010443 334 ESAAGAYPEIAVKIMRRICIEAES 357 (510)
Q Consensus 334 Eta~G~yP~~~V~~m~~i~~~aE~ 357 (510)
=--...-+.+.++..+.|+..+.-
T Consensus 127 P~y~~~s~~~l~~~f~~va~a~~l 150 (314)
T 3qze_A 127 PYYNKPTQEGMYQHFRHIAEAVAI 150 (314)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHSCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCC
Confidence 433333456788899999888753
No 295
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=39.24 E-value=1.3e+02 Score=29.05 Aligned_cols=93 Identities=10% Similarity=0.086 Sum_probs=55.8
Q ss_pred hccCcCCCCEEEEc------CCCCHHHHHHHHHHhccCCCCceEEEEe---cCHHHHhchHHHHhh-cCeeEEeCCcccC
Q 010443 200 RWGVPNNIDMIALS------FVRKGSDLVNVRKVLGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARGDLGM 269 (510)
Q Consensus 200 ~~a~~~g~d~I~~s------fV~sa~dv~~vr~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-~DgI~IgrgDLg~ 269 (510)
++.++.|+|+|++. +.-|.++=.++-+...+.... +|+-+ -|.++++......+. +|++|+-+-.+.-
T Consensus 26 ~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 103 (286)
T 2r91_A 26 KNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQVASLNADEAIALAKYAESRGAEAVASLPPYYFP 103 (286)
T ss_dssp HHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCSST
T ss_pred HHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCC
Confidence 77889999999873 333444444444433322222 88887 347777766665554 7999997654432
Q ss_pred CCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 270 EIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 270 e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
..+.+.+...-+.| |.+.+.|+++.
T Consensus 104 ~~s~~~l~~~f~~v---a~a~~lPiilY 128 (286)
T 2r91_A 104 RLSERQIAKYFRDL---CSAVSIPVFLY 128 (286)
T ss_dssp TCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 12344554444555 45568999874
No 296
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=39.23 E-value=39 Score=32.81 Aligned_cols=53 Identities=17% Similarity=0.211 Sum_probs=35.0
Q ss_pred CHHHHHHHHHhCCCeEEEeecCC---------CH-HHHHHHHHHHHHHHHhcCCcEEEEecCCCC
Q 010443 34 SVPMLEKLLRAGMNVARFNFSHG---------TH-EYQQETLNNLRAAMHNTQILCAVMLDTKGP 88 (510)
Q Consensus 34 ~~~~l~~li~~G~~~~RiN~sh~---------~~-~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 88 (510)
+.+.++.|-+.|+|++||-++.. .. +...+.++.+=+.+.+.| +.+++|+-..
T Consensus 33 ~~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~g--i~vild~h~~ 95 (305)
T 1h1n_A 33 DPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKG--AYAVVDPHNY 95 (305)
T ss_dssp CHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTT--CEEEEEECCT
T ss_pred CHHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEecccc
Confidence 48899999999999999988632 11 223344444444455566 4678887643
No 297
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=39.15 E-value=81 Score=25.15 Aligned_cols=64 Identities=11% Similarity=0.163 Sum_probs=37.2
Q ss_pred HHHHHHHhcCCcEEEEEc----CCchH-HHHHHhhCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCC
Q 010443 385 SAVRTANKARAKLIVVLT----RGGTT-AKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEG 459 (510)
Q Consensus 385 ~av~~A~~~~a~aIvv~T----~sG~t-A~~iSr~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~ 459 (510)
.|.+.......+.|++-. .+|.. .+.+.+..|.+||++++ . ........-.+..|+.-++..+
T Consensus 42 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t------~------~~~~~~~~~~~~~g~~~~l~KP 109 (130)
T 3eod_A 42 DALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVIS------A------TENMADIAKALRLGVEDVLLKP 109 (130)
T ss_dssp HHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEE------C------CCCHHHHHHHHHHCCSEEEESC
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEE------c------CCCHHHHHHHHHcCCCEEEeCC
Confidence 344445556678766643 24543 56676777999999992 1 2222222334567888888766
Q ss_pred C
Q 010443 460 S 460 (510)
Q Consensus 460 ~ 460 (510)
.
T Consensus 110 ~ 110 (130)
T 3eod_A 110 V 110 (130)
T ss_dssp C
T ss_pred C
Confidence 3
No 298
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=38.97 E-value=89 Score=31.63 Aligned_cols=31 Identities=26% Similarity=0.336 Sum_probs=24.0
Q ss_pred CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 291 GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 291 gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
..|+|...-+- --.|+..++..|||++|+..
T Consensus 272 ~ipVia~GGI~------------~g~Dv~kaLalGA~aV~iGr 302 (352)
T 3sgz_A 272 KIEVYMDGGVR------------TGTDVLKALALGARCIFLGR 302 (352)
T ss_dssp SSEEEEESSCC------------SHHHHHHHHHTTCSEEEESH
T ss_pred CCeEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 57888765533 24789999999999999963
No 299
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=38.96 E-value=1.8e+02 Score=28.45 Aligned_cols=131 Identities=14% Similarity=0.103 Sum_probs=74.0
Q ss_pred CChhcHHHHHhccCcCCCCEEEEcC-------------CCCHHHHHHHHHHhccCCCCceEEEEecC-------HHHHhc
Q 010443 190 LTEKDKEDILRWGVPNNIDMIALSF-------------VRKGSDLVNVRKVLGPHAKNIQLMSKVEN-------QEGVVN 249 (510)
Q Consensus 190 lt~~D~~di~~~a~~~g~d~I~~sf-------------V~sa~dv~~vr~~l~~~~~~~~IiakIEt-------~~av~n 249 (510)
++.+|.--- +.+-+.|+|.|.+.. -=+.+++..--+.+...-+.+.|++=++- .++++|
T Consensus 22 ~tayDa~sA-~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~n 100 (275)
T 1o66_A 22 LTAYESSFA-ALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAA 100 (275)
T ss_dssp EECCSHHHH-HHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHH
T ss_pred EeCcCHHHH-HHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHH
Confidence 455676666 666788999997752 11344444333333332345677777763 457888
Q ss_pred hHHHHhh-cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEe---h-hh---hHhhhcCCCCCh-Hh-HHHHH
Q 010443 250 FDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA---T-QM---LESMIKSPRPTR-AE-ATDVA 319 (510)
Q Consensus 250 ldeI~~~-~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviva---T-qm---LeSM~~~~~Ptr-aE-v~Dv~ 319 (510)
...+++. +++|-+--|+ .+...|+++.++|.||+-- | |- +.......+..+ .| +.|..
T Consensus 101 a~rl~kaGa~aVklEdg~------------e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~ 168 (275)
T 1o66_A 101 AAELMAAGAHMVKLEGGV------------WMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAK 168 (275)
T ss_dssp HHHHHHTTCSEEEEECSG------------GGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCcH------------HHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHH
Confidence 8888885 6898886552 2345567778899998611 1 11 111111111111 22 24555
Q ss_pred HHHHcCCceEEecc
Q 010443 320 NAVLDGTDCVMLSG 333 (510)
Q Consensus 320 ~av~~G~D~imLs~ 333 (510)
.....|+|+++|-+
T Consensus 169 a~~eAGA~~ivlE~ 182 (275)
T 1o66_A 169 AHDDAGAAVVLMEC 182 (275)
T ss_dssp HHHHTTCSEEEEES
T ss_pred HHHHcCCcEEEEec
Confidence 57778999999853
No 300
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=38.91 E-value=69 Score=32.11 Aligned_cols=125 Identities=14% Similarity=0.104 Sum_probs=61.3
Q ss_pred hcHHHHHhccCcCCCCEEEEcCC----------------CCHHHHHHHHHHhccCCCCceEEEEecC-------H-HHHh
Q 010443 193 KDKEDILRWGVPNNIDMIALSFV----------------RKGSDLVNVRKVLGPHAKNIQLMSKVEN-------Q-EGVV 248 (510)
Q Consensus 193 ~D~~di~~~a~~~g~d~I~~sfV----------------~sa~dv~~vr~~l~~~~~~~~IiakIEt-------~-~av~ 248 (510)
.+.....+.+.+.|+|+|-+.+- ++++.+.++-+.+.+. -++.|..||-. . +.++
T Consensus 70 ~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~-v~~PV~vKiR~g~~~~~~~~~~~~ 148 (350)
T 3b0p_A 70 KSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEA-VRVPVTVKMRLGLEGKETYRGLAQ 148 (350)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHH-CSSCEEEEEESCBTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHH-hCCceEEEEecCcCccccHHHHHH
Confidence 33333336777889999988752 2344444444433322 14678888731 1 1222
Q ss_pred chHHHHhh-cCeeEEeCCcc--cCCCCch--hHHHHHHHHHHHHH-Hc-CCCeEEehhhhHhhhcCCCCChHhHHHHHHH
Q 010443 249 NFDDILRE-TDSFMVARGDL--GMEIPVE--KIFLAQKMMIYKCN-LV-GKPVVTATQMLESMIKSPRPTRAEATDVANA 321 (510)
Q Consensus 249 nldeI~~~-~DgI~IgrgDL--g~e~~~~--~v~~~qk~ii~~~~-~~-gkpvivaTqmLeSM~~~~~PtraEv~Dv~~a 321 (510)
-+..+.+. +|+|.+..+.- |.. |.. ..+...-..+...+ .. +.|+|.... .-|.. |+..+
T Consensus 149 ~a~~l~~aG~d~I~V~~r~~~~g~~-g~~~~~~~~~~~~~i~~ik~~~~~iPVianGg---------I~s~e---da~~~ 215 (350)
T 3b0p_A 149 SVEAMAEAGVKVFVVHARSALLALS-TKANREIPPLRHDWVHRLKGDFPQLTFVTNGG---------IRSLE---EALFH 215 (350)
T ss_dssp HHHHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEEESS---------CCSHH---HHHHH
T ss_pred HHHHHHHcCCCEEEEecCchhcccC-cccccCCCcccHHHHHHHHHhCCCCeEEEECC---------cCCHH---HHHHH
Confidence 22222223 68998874321 111 000 00001112233333 34 789987544 33444 33445
Q ss_pred HHcCCceEEec
Q 010443 322 VLDGTDCVMLS 332 (510)
Q Consensus 322 v~~G~D~imLs 332 (510)
+. |+|++|+.
T Consensus 216 l~-GaD~V~iG 225 (350)
T 3b0p_A 216 LK-RVDGVMLG 225 (350)
T ss_dssp HT-TSSEEEEC
T ss_pred Hh-CCCEEEEC
Confidence 54 99999995
No 301
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=38.88 E-value=84 Score=30.59 Aligned_cols=104 Identities=11% Similarity=0.102 Sum_probs=61.0
Q ss_pred hcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCC-CCceEEEEe---------cCHHHHhchHHHHhhcCeeEE
Q 010443 193 KDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHA-KNIQLMSKV---------ENQEGVVNFDDILRETDSFMV 262 (510)
Q Consensus 193 ~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~-~~~~IiakI---------Et~~av~nldeI~~~~DgI~I 262 (510)
.|...+.+.+.+.|++.++++- .+.++...+.++..... ....+++-+ .+.+.++.+++.++....+-|
T Consensus 17 ~d~~~vl~~a~~~gV~~~v~~g-~~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~vvaI 95 (287)
T 3rcm_A 17 DQQAAIVERALEAGVTQMLLTG-TSLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRAV 95 (287)
T ss_dssp TCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTTEEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHhCCCCCceEEEEEEECcCccccCCHHHHHHHHHHhcCCCeEEE
Confidence 4666655888899999888774 46777777666654321 112243333 122345555565543334444
Q ss_pred eCCcccCCCCch-hHHHHH----HHHHHHHHHcCCCeEEehh
Q 010443 263 ARGDLGMEIPVE-KIFLAQ----KMMIYKCNLVGKPVVTATQ 299 (510)
Q Consensus 263 grgDLg~e~~~~-~v~~~q----k~ii~~~~~~gkpvivaTq 299 (510)
|..|.+.... .-...| ++.++.|++.|+|+++-|.
T Consensus 96 --GEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r 135 (287)
T 3rcm_A 96 --GECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHER 135 (287)
T ss_dssp --EEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred --EEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 5666665331 112233 5778889999999998553
No 302
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=38.56 E-value=55 Score=31.65 Aligned_cols=53 Identities=11% Similarity=0.065 Sum_probs=35.0
Q ss_pred CCHHHHHHHHH-hCCCeEEEeecCC------CHHHHHHHHHHHHHHHHhcCCcEEEEecCCC
Q 010443 33 RSVPMLEKLLR-AGMNVARFNFSHG------THEYQQETLNNLRAAMHNTQILCAVMLDTKG 87 (510)
Q Consensus 33 ~~~~~l~~li~-~G~~~~RiN~sh~------~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 87 (510)
.+.+.++.|.+ .|+|++|+-+... +++.+.+.++.+=+.+.+.|. .+++|+-+
T Consensus 43 ~~~~d~~~l~~~~G~N~vRi~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl--~vild~h~ 102 (306)
T 2cks_A 43 LTDSSLDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATARGL--YVIVDWHI 102 (306)
T ss_dssp CSHHHHHHHHHTSCCSEEEEEEESSTTSGGGCHHHHHHHHHHHHHHHHTTTC--EEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEEeeecCCCcccCHHHHHHHHHHHHHHHHHCCC--EEEEEecC
Confidence 35788998986 7999999988752 222244555555555666664 56777753
No 303
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=38.36 E-value=2.1e+02 Score=27.65 Aligned_cols=114 Identities=15% Similarity=0.189 Sum_probs=67.6
Q ss_pred HHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccchH
Q 010443 283 MIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYR 362 (510)
Q Consensus 283 ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~ 362 (510)
+..+|+..|.++.+-. |.......+...-..|++.+....+. . ..++.+...+++.+-...+ +
T Consensus 82 lA~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~Ga~v~~~~~~~---~-~~~~~~~a~~l~~~~~~~~-~- 144 (313)
T 2q3b_A 82 LAMVCAARGYRCVLTM-----------PETMSLERRMLLRAYGAELILTPGAD---G-MSGAIAKAEELAKTDQRYF-V- 144 (313)
T ss_dssp HHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHCTTEE-C-
T ss_pred HHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEeCCCC---C-HHHHHHHHHHHHHhCCCEE-e-
Confidence 5677889999987631 22222234455556799987776431 1 2355555555544322101 1
Q ss_pred HHHHHHHhcCCCC-CCchH--H-HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 363 AVFKEMIRSTPLP-MSPLE--S-LASSAVRTANKAR--AKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 363 ~~~~~~~~~~~~~-~~~~~--~-ia~~av~~A~~~~--a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
+.+ .++.. . -...+.++.++++ .+.||+.+-+|.++.-+++ ..|...|+++
T Consensus 145 ----------~~~~~n~~~~~~~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~v 205 (313)
T 2q3b_A 145 ----------PQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAV 205 (313)
T ss_dssp ----------CCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred ----------CCCCCChhhHHHHHHHHHHHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEE
Confidence 011 11211 1 2234667777763 7899999999999766665 4699999999
No 304
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=38.33 E-value=2.6e+02 Score=27.23 Aligned_cols=109 Identities=13% Similarity=-0.034 Sum_probs=58.7
Q ss_pred hccCcCCCC-EEEEcCCCCHHHHHHHHHHhccC-C--CCceEEEEe--cCHHHHhchHHHHhh-cCeeEEeCCcccCCCC
Q 010443 200 RWGVPNNID-MIALSFVRKGSDLVNVRKVLGPH-A--KNIQLMSKV--ENQEGVVNFDDILRE-TDSFMVARGDLGMEIP 272 (510)
Q Consensus 200 ~~a~~~g~d-~I~~sfV~sa~dv~~vr~~l~~~-~--~~~~IiakI--Et~~av~nldeI~~~-~DgI~IgrgDLg~e~~ 272 (510)
..+.+.|.- ++......+++++.+.-+.+++. + ..+.++..- ..+.--+.++.+++. .|+|.++-|+ |
T Consensus 33 ~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~-----p 107 (328)
T 2gjl_A 33 AAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND-----P 107 (328)
T ss_dssp HHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC-----C
T ss_pred HHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC-----c
Confidence 444556654 44444556677765433333221 1 123344320 022222344454544 6999987442 2
Q ss_pred chhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCC
Q 010443 273 VEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGES 335 (510)
Q Consensus 273 ~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Et 335 (510)
..+++.++++|.|++... .|.. +...+...|+|++.+++=+
T Consensus 108 --------~~~~~~l~~~gi~vi~~v-----------~t~~---~a~~~~~~GaD~i~v~g~~ 148 (328)
T 2gjl_A 108 --------GEHIAEFRRHGVKVIHKC-----------TAVR---HALKAERLGVDAVSIDGFE 148 (328)
T ss_dssp --------HHHHHHHHHTTCEEEEEE-----------SSHH---HHHHHHHTTCSEEEEECTT
T ss_pred --------HHHHHHHHHcCCCEEeeC-----------CCHH---HHHHHHHcCCCEEEEECCC
Confidence 356677788899988521 2222 3446778999999996533
No 305
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=38.19 E-value=3e+02 Score=26.99 Aligned_cols=106 Identities=15% Similarity=0.032 Sum_probs=58.1
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEE--ecCHHHHhchHHHHhh-cCeeEEeCCcccCCCCchhH
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSK--VENQEGVVNFDDILRE-TDSFMVARGDLGMEIPVEKI 276 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~Iiak--IEt~~av~nldeI~~~-~DgI~IgrgDLg~e~~~~~v 276 (510)
..+.+.|.-+++.+---+++++.+.-+.+++.-. ..+.+. +-++.--+.++.+++. +|.|.++-|+ |
T Consensus 44 ~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~-~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~-----p---- 113 (326)
T 3bo9_A 44 AAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTD-KPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGN-----P---- 113 (326)
T ss_dssp HHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCS-SCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSC-----C----
T ss_pred HHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcC-CCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCC-----c----
Confidence 4455667655554433467776655444443221 122222 2233323334444443 6999987653 3
Q ss_pred HHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 277 FLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 277 ~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
..+++.+++.|.|++... .+.. +...+...|+|++.+++
T Consensus 114 ----~~~~~~l~~~g~~v~~~v-----------~s~~---~a~~a~~~GaD~i~v~g 152 (326)
T 3bo9_A 114 ----TKYIRELKENGTKVIPVV-----------ASDS---LARMVERAGADAVIAEG 152 (326)
T ss_dssp ----HHHHHHHHHTTCEEEEEE-----------SSHH---HHHHHHHTTCSCEEEEC
T ss_pred ----HHHHHHHHHcCCcEEEEc-----------CCHH---HHHHHHHcCCCEEEEEC
Confidence 234566778899988631 2333 34456778999999965
No 306
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=38.17 E-value=48 Score=33.98 Aligned_cols=95 Identities=14% Similarity=0.160 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHhccCCCCceEEEE-ecCHHHHhchHHHHhh-cCeeEEe-CCcccCCCCchhHHHHHHHHHHHHHHcCCC
Q 010443 217 KGSDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKP 293 (510)
Q Consensus 217 sa~dv~~vr~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-~DgI~Ig-rgDLg~e~~~~~v~~~qk~ii~~~~~~gkp 293 (510)
+.++++.+++.. +..++.| +-+ .+......+. +|+|.++ +|-=..+.+.+.+. .-.++.++. .-..|
T Consensus 240 ~~~~i~~lr~~~-----~~PvivKgv~~---~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~-~l~~v~~av-~~~ip 309 (392)
T 2nzl_A 240 SWEDIKWLRRLT-----SLPIVAKGILR---GDDAREAVKHGLNGILVSNHGARQLDGVPATID-VLPEIVEAV-EGKVE 309 (392)
T ss_dssp CHHHHHHHC--C-----CSCEEEEEECC---HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHH-HHHHHHHHH-TTSSE
T ss_pred HHHHHHHHHHhh-----CCCEEEEecCC---HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHH-HHHHHHHHc-CCCCE
Confidence 455666665543 4678887 322 3333333333 7999994 11000112222221 112222221 12488
Q ss_pred eEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 294 VVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 294 vivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
+|....+- --.|+..++..|||++|+..
T Consensus 310 Via~GGI~------------~g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 310 VFLDGGVR------------KGTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp EEECSSCC------------SHHHHHHHHHTTCSEEEECH
T ss_pred EEEECCCC------------CHHHHHHHHHhCCCeeEECH
Confidence 88765433 24688999999999999974
No 307
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=37.99 E-value=2.5e+02 Score=28.08 Aligned_cols=111 Identities=13% Similarity=0.095 Sum_probs=59.7
Q ss_pred hccCcCCCCEEEE-------------cCCCCHHH----------------HHHHHHHhccCCCCceEEEEecCH---H--
Q 010443 200 RWGVPNNIDMIAL-------------SFVRKGSD----------------LVNVRKVLGPHAKNIQLMSKVENQ---E-- 245 (510)
Q Consensus 200 ~~a~~~g~d~I~~-------------sfV~sa~d----------------v~~vr~~l~~~~~~~~IiakIEt~---~-- 245 (510)
+.+.+.|+|+|=+ |..+...| ++.+|+.+ +.+ .|..||-.- .
T Consensus 168 ~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v---g~~-~v~vrls~~~~~~~~ 243 (364)
T 1vyr_A 168 ANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEW---SAD-RIGIRVSPIGTFQNV 243 (364)
T ss_dssp HHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHS---CGG-GEEEEECCSSCBTTB
T ss_pred HHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhc---CCC-cEEEEEccccccccc
Confidence 4567899999988 44443333 44555544 334 677777322 1
Q ss_pred -----HHhchHHHHhh-----cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhH
Q 010443 246 -----GVVNFDDILRE-----TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEA 315 (510)
Q Consensus 246 -----av~nldeI~~~-----~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv 315 (510)
.++..-++++. .|.|-+..+...-.-+ ..+. .+-...+..+.|++.... . |+
T Consensus 244 ~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~-~~~~----~~~~v~~~~~iPvi~~Gg---------i-t~--- 305 (364)
T 1vyr_A 244 DNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKP-YSEA----FRQKVRERFHGVIIGAGA---------Y-TA--- 305 (364)
T ss_dssp CCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCC-CCHH----HHHHHHHHCCSEEEEESS---------C-CH---
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCc-ccHH----HHHHHHHHCCCCEEEECC---------c-CH---
Confidence 22333333332 5888887543211111 1111 122223446889887543 2 33
Q ss_pred HHHHHHHHcC-CceEEec
Q 010443 316 TDVANAVLDG-TDCVMLS 332 (510)
Q Consensus 316 ~Dv~~av~~G-~D~imLs 332 (510)
.+...++..| +|+||+.
T Consensus 306 ~~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 306 EKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp HHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHCCCccEEEEC
Confidence 3446677788 9999996
No 308
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=37.97 E-value=1.2e+02 Score=30.44 Aligned_cols=75 Identities=12% Similarity=0.123 Sum_probs=46.6
Q ss_pred cccccccccCCCCCCCCCeEEEEec-CCCCCCHHH----HHHHHHh-CCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCC
Q 010443 4 IDIEGLLRDVPNDKRLPKTKIVCTL-GPASRSVPM----LEKLLRA-GMNVARFNFSHGTHEYQQETLNNLRAAMHNTQI 77 (510)
Q Consensus 4 ~~~~~~~~~~p~~~~~~~tkIi~Ti-Gp~~~~~~~----l~~li~~-G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~ 77 (510)
.-+.++|+... .++...-+|+ |....+++. .+++++. |.+.+.+.+...+.++-.+.++.+|++ .|.
T Consensus 124 ~Pv~~llGg~~----~~~v~~y~s~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~---~g~ 196 (372)
T 3tj4_A 124 VPLWHYLGGAR----TAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRER---VDS 196 (372)
T ss_dssp SBHHHHTTCCS----CSCEEEEECTTCCTTSCHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHH---SCT
T ss_pred CcHHHHcCCCC----CCCeEEEEecCCccCCCHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHH---cCC
Confidence 34556777432 2336777884 322334443 3457778 999999999877777766667766654 344
Q ss_pred cEEEEecC
Q 010443 78 LCAVMLDT 85 (510)
Q Consensus 78 ~v~i~~Dl 85 (510)
-+.+++|.
T Consensus 197 ~~~l~vDa 204 (372)
T 3tj4_A 197 AVRIAIDG 204 (372)
T ss_dssp TCEEEEEC
T ss_pred CCcEEeeC
Confidence 45566664
No 309
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=37.60 E-value=2.3e+02 Score=25.96 Aligned_cols=34 Identities=12% Similarity=0.007 Sum_probs=25.2
Q ss_pred hccCcCCCCEEEEcCCC------CHHHHHHHHHHhccCCC
Q 010443 200 RWGVPNNIDMIALSFVR------KGSDLVNVRKVLGPHAK 233 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~------sa~dv~~vr~~l~~~~~ 233 (510)
+.+.+.|+|+|=+..-. +.+++.++++.+.+.|-
T Consensus 26 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl 65 (272)
T 2q02_A 26 RLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGL 65 (272)
T ss_dssp HHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCC
Confidence 67788999999886421 35678888888877653
No 310
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=37.57 E-value=1.1e+02 Score=30.65 Aligned_cols=97 Identities=8% Similarity=-0.016 Sum_probs=60.5
Q ss_pred HHHhccCcCCCCEEEEc------CCCCHHHHHHHHHHhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCCc
Q 010443 197 DILRWGVPNNIDMIALS------FVRKGSDLVNVRKVLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGD 266 (510)
Q Consensus 197 di~~~a~~~g~d~I~~s------fV~sa~dv~~vr~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~IgrgD 266 (510)
.+.++.++.|+|+|++. +.-|.++=.++-+. ..+.++.||+-+= |.++++......+. +|++|+-+-.
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 128 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRV 128 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 33367889999999873 44555555555554 2335788999884 46777766665554 7999997654
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 267 LGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 267 Lg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
+.-..+.+.+...-+.|.++ +.+.|+++.
T Consensus 129 y~~~~s~~~l~~~f~~IA~a--a~~lPiilY 157 (344)
T 2hmc_A 129 LSRGSVIAAQKAHFKAILSA--APEIPAVIY 157 (344)
T ss_dssp SSSTTCHHHHHHHHHHHHHH--STTSCEEEE
T ss_pred cCCCCCHHHHHHHHHHHHhh--CCCCcEEEE
Confidence 43212334554444555331 457898874
No 311
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=37.51 E-value=41 Score=31.91 Aligned_cols=58 Identities=14% Similarity=0.049 Sum_probs=40.6
Q ss_pred HHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHH
Q 010443 280 QKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 353 (510)
Q Consensus 280 qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 353 (510)
-...++.++++|++|.+-|- .+ .+ -+..++..++..|+|+|+- .||..+.+++.++|+
T Consensus 201 ~~~~v~~~~~~G~~v~~wTv------~~-~~--n~~~~~~~l~~~GvdgI~T-------D~p~~~~~~l~~~~~ 258 (258)
T 2o55_A 201 TKEQVCTAHEKGLSVTVWMP------WI-FD--DSEEDWKKCLELQVDLICS-------NYPFGLMNFLSNISE 258 (258)
T ss_dssp CHHHHHHHHHTTCEEEEECC------TT-CC--CCHHHHHHHHHHTCSEEEE-------SCHHHHHHHHTC---
T ss_pred CHHHHHHHHHCCCEEEEeeC------CC-CC--CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHHhcC
Confidence 36788999999999998772 00 11 1234455677789999875 699999999888774
No 312
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=37.43 E-value=29 Score=35.90 Aligned_cols=43 Identities=21% Similarity=0.380 Sum_probs=33.2
Q ss_pred EecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHH
Q 010443 26 CTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRA 70 (510)
Q Consensus 26 ~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~ 70 (510)
+.+|+.. .+.++.++++|++++=|+.+||..+.+.+.++.+|+
T Consensus 139 ~~v~~~~--~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~ 181 (400)
T 3ffs_A 139 AAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 181 (400)
T ss_dssp EEECCC---CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHT
T ss_pred eecCCCH--HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHh
Confidence 4456543 899999999999999999999987766666666554
No 313
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=37.17 E-value=39 Score=33.42 Aligned_cols=74 Identities=12% Similarity=0.109 Sum_probs=44.6
Q ss_pred CCChhcHHHHHhccCcCCCCEEEEcCCC------------------C--------HHHHHHHHHHhccCCCCceEEE--E
Q 010443 189 TLTEKDKEDILRWGVPNNIDMIALSFVR------------------K--------GSDLVNVRKVLGPHAKNIQLMS--K 240 (510)
Q Consensus 189 ~lt~~D~~di~~~a~~~g~d~I~~sfV~------------------s--------a~dv~~vr~~l~~~~~~~~Iia--k 240 (510)
.++..|...+.+.+.+.|+|+|.++--. + .+.+.++++.+. .++.||+ -
T Consensus 221 ~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~---~~ipVi~~GG 297 (336)
T 1f76_A 221 DLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELN---GRLPIIGVGG 297 (336)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHT---TSSCEEEESS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhC---CCCCEEEECC
Confidence 3566665555477788999999987321 1 134445555442 3566766 5
Q ss_pred ecCHHHHhchHHHHhhcCeeEEeCCcc
Q 010443 241 VENQEGVVNFDDILRETDSFMVARGDL 267 (510)
Q Consensus 241 IEt~~av~nldeI~~~~DgI~IgrgDL 267 (510)
|-|.+-+..+ |..-+|+|++||+=|
T Consensus 298 I~~~~da~~~--l~~GAd~V~igr~~l 322 (336)
T 1f76_A 298 IDSVIAAREK--IAAGASLVQIYSGFI 322 (336)
T ss_dssp CCSHHHHHHH--HHHTCSEEEESHHHH
T ss_pred CCCHHHHHHH--HHCCCCEEEeeHHHH
Confidence 6665554322 223389999998644
No 314
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=37.10 E-value=2.5e+02 Score=27.33 Aligned_cols=89 Identities=17% Similarity=0.068 Sum_probs=55.2
Q ss_pred cCeeEEeCCccc--CCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEecc
Q 010443 257 TDSFMVARGDLG--MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 333 (510)
Q Consensus 257 ~DgI~IgrgDLg--~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~ 333 (510)
.||+++. |--| ..+..++-..+-+.+++.++ -..|+++-| ...+-.|..+.+. |-..|+|++|+..
T Consensus 46 v~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 46 IDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIAHV---------GCVSTAESQQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp CSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCCCHHHHHHHHHHHHhCCCCEEEecC
Confidence 7999885 2221 23444554444455554443 246877643 2445566666555 5667999999975
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh
Q 010443 334 ESAAGAYPEIAVKIMRRICIEAE 356 (510)
Q Consensus 334 Eta~G~yP~~~V~~m~~i~~~aE 356 (510)
=--...-+.+.++..+.|+..+.
T Consensus 115 P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 115 PFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC
Confidence 44333345777889999998887
No 315
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=37.08 E-value=2.4e+02 Score=26.45 Aligned_cols=126 Identities=14% Similarity=0.139 Sum_probs=74.3
Q ss_pred HHHhccCcCCCCEEEE-----cCCC----CHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeEEeCCc
Q 010443 197 DILRWGVPNNIDMIAL-----SFVR----KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGD 266 (510)
Q Consensus 197 di~~~a~~~g~d~I~~-----sfV~----sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~IgrgD 266 (510)
.+ +.+ +.|+|++-+ .||- ....++.+|+.. +..+-+--|+++++.. ++..+++ +|++.+-.
T Consensus 18 ~i-~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~---~~~~dvhLmv~dp~~~--i~~~~~aGAd~itvh~-- 88 (231)
T 3ctl_A 18 QI-EFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLA---TKPLDCHLMVTRPQDY--IAQLARAGADFITLHP-- 88 (231)
T ss_dssp HH-HHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTC---CSCEEEEEESSCGGGT--HHHHHHHTCSEEEECG--
T ss_pred HH-HHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhcc---CCcEEEEEEecCHHHH--HHHHHHcCCCEEEECc--
Confidence 44 455 778887532 2322 356677777653 2345677888887653 5666665 79998852
Q ss_pred ccCCC-CchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEe-ccCCCCC--CCHH
Q 010443 267 LGMEI-PVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML-SGESAAG--AYPE 342 (510)
Q Consensus 267 Lg~e~-~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imL-s~Eta~G--~yP~ 342 (510)
|. + .. -++.++.++++|+-++++. ||. |..|. ...+.+++|.+++ |-+.-.| +|.-
T Consensus 89 ---Ea~~----~~-~~~~i~~i~~~G~k~gv~l--------np~-tp~~~---~~~~l~~~D~VlvmsV~pGfggQ~f~~ 148 (231)
T 3ctl_A 89 ---ETIN----GQ-AFRLIDEIRRHDMKVGLIL--------NPE-TPVEA---MKYYIHKADKITVMTVDPGFAGQPFIP 148 (231)
T ss_dssp ---GGCT----TT-HHHHHHHHHHTTCEEEEEE--------CTT-CCGGG---GTTTGGGCSEEEEESSCTTCSSCCCCT
T ss_pred ---ccCC----cc-HHHHHHHHHHcCCeEEEEE--------ECC-CcHHH---HHHHHhcCCEEEEeeeccCcCCccccH
Confidence 22 1 11 2578899999999999873 332 22221 3345568998864 5555333 3554
Q ss_pred HHHHHHHHH
Q 010443 343 IAVKIMRRI 351 (510)
Q Consensus 343 ~~V~~m~~i 351 (510)
.+++.++++
T Consensus 149 ~~l~kI~~l 157 (231)
T 3ctl_A 149 EMLDKLAEL 157 (231)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444443
No 316
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=36.99 E-value=74 Score=32.05 Aligned_cols=77 Identities=14% Similarity=0.142 Sum_probs=48.1
Q ss_pred cccccccccCCCCCCCCCeEEEEecCCCCC--CHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEE
Q 010443 4 IDIEGLLRDVPNDKRLPKTKIVCTLGPASR--SVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAV 81 (510)
Q Consensus 4 ~~~~~~~~~~p~~~~~~~tkIi~TiGp~~~--~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i 81 (510)
.-+.++|++.++ .+...-+|+|-.+. ..+..+++.+.|.+.+.+.+...+.++-.+.++.+|++.. |.-+.+
T Consensus 126 ~Pl~~LLGG~~r----~~v~~y~s~~~~~~~~~~~~a~~~~~~G~~~~KiKvg~~~~~~di~~v~~vr~a~~--g~~~~l 199 (376)
T 4h2h_A 126 VPVHELLGGALT----DSVSSYYSLGVMEPDEAARQALEKQREGYSRLQVKLGARPIEIDIEAIRKVWEAVR--GTGIAL 199 (376)
T ss_dssp CBHHHHTTCCSC----SEEECEEEECSCCHHHHHHHHHHHHHHTCSEEEEECCSSCHHHHHHHHHHHHHHHT--TSCCEE
T ss_pred CCceecCCCCcC----CceeEeeecccCCHHHHHHHHHHHHhcCceEEEEecCCCCHHHHHHHHHHHHhhcc--CCeeEE
Confidence 345566764322 34566678875431 1334556788999999999998887776677777776542 333445
Q ss_pred EecCC
Q 010443 82 MLDTK 86 (510)
Q Consensus 82 ~~Dl~ 86 (510)
++|-.
T Consensus 200 ~vDaN 204 (376)
T 4h2h_A 200 AADGN 204 (376)
T ss_dssp EEECT
T ss_pred EEeec
Confidence 55543
No 317
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=36.81 E-value=57 Score=29.58 Aligned_cols=105 Identities=15% Similarity=0.205 Sum_probs=60.6
Q ss_pred CCCCEEEEc--C--CCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhc-hHHHHhh-cCeeEEeCCcccCCCCchhHHH
Q 010443 205 NNIDMIALS--F--VRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVN-FDDILRE-TDSFMVARGDLGMEIPVEKIFL 278 (510)
Q Consensus 205 ~g~d~I~~s--f--V~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~n-ldeI~~~-~DgI~IgrgDLg~e~~~~~v~~ 278 (510)
.|+|+|-+- | -...+.++++|+.. .+..+.+-.=...+.+. +++..+. +|++.+. ++. . ..
T Consensus 24 ~~~diie~G~p~~~~~g~~~i~~ir~~~----~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~--~~~----~---~~ 90 (211)
T 3f4w_A 24 DDVDIIEVGTPFLIREGVNAIKAIKEKY----PHKEVLADAKIMDGGHFESQLLFDAGADYVTVL--GVT----D---VL 90 (211)
T ss_dssp GGCSEEEECHHHHHHHTTHHHHHHHHHC----TTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEE--TTS----C---HH
T ss_pred cCccEEEeCcHHHHhccHHHHHHHHHhC----CCCEEEEEEEeccchHHHHHHHHhcCCCEEEEe--CCC----C---hh
Confidence 589987654 3 33456666776643 23444442222233344 5555555 7999995 332 1 12
Q ss_pred HHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 279 AQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 279 ~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
..+.+++.|+++|+++++. ++ +| .|. ...+..+...|+|.+.+.
T Consensus 91 ~~~~~~~~~~~~g~~~~v~--~~-----~~-~t~--~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 91 TIQSCIRAAKEAGKQVVVD--MI-----CV-DDL--PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHHHHHHHTCEEEEE--CT-----TC-SSH--HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHcCCeEEEE--ec-----CC-CCH--HHHHHHHHHcCCCEEEEc
Confidence 3367888899999998863 11 11 122 233466778899998764
No 318
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=36.77 E-value=2.2e+02 Score=28.58 Aligned_cols=121 Identities=12% Similarity=0.155 Sum_probs=65.8
Q ss_pred CCChhcHHHHH-------hccCcCCCCEEEEcC-------------CCCHHH----------------HHHHHHHhccCC
Q 010443 189 TLTEKDKEDIL-------RWGVPNNIDMIALSF-------------VRKGSD----------------LVNVRKVLGPHA 232 (510)
Q Consensus 189 ~lt~~D~~di~-------~~a~~~g~d~I~~sf-------------V~sa~d----------------v~~vr~~l~~~~ 232 (510)
.||..|++.+. +.+.+.|+|+|=+-. .+...| ++.+|+.+.
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg--- 226 (365)
T 2gou_A 150 AMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIG--- 226 (365)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHC---
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcC---
Confidence 35665554432 356789999999843 222222 555665553
Q ss_pred CCceEEEEecCH---------HHHhchHHHHhh-----cCeeEEeCCcccCCCCchhHHHHHHHHHH-HHHHcCCCeEEe
Q 010443 233 KNIQLMSKVENQ---------EGVVNFDDILRE-----TDSFMVARGDLGMEIPVEKIFLAQKMMIY-KCNLVGKPVVTA 297 (510)
Q Consensus 233 ~~~~IiakIEt~---------~av~nldeI~~~-----~DgI~IgrgDLg~e~~~~~v~~~qk~ii~-~~~~~gkpviva 297 (510)
.+ .|..||-.- ..++...++++. .|+|-+..+...-.-+. .+ ..++ ..+..+.|+|..
T Consensus 227 ~~-pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~-~~-----~~~~~i~~~~~iPvi~~ 299 (365)
T 2gou_A 227 AE-RVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDT-PV-----SFKRALREAYQGVLIYA 299 (365)
T ss_dssp GG-GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCC-CH-----HHHHHHHHHCCSEEEEE
T ss_pred CC-cEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCc-cH-----HHHHHHHHHCCCcEEEe
Confidence 34 677787321 123333333332 58888876543211111 11 2222 233457898875
Q ss_pred hhhhHhhhcCCCCChHhHHHHHHHHHcC-CceEEec
Q 010443 298 TQMLESMIKSPRPTRAEATDVANAVLDG-TDCVMLS 332 (510)
Q Consensus 298 TqmLeSM~~~~~PtraEv~Dv~~av~~G-~D~imLs 332 (510)
.. . |. .+...++..| +|+|++.
T Consensus 300 Gg---------i-~~---~~a~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 300 GR---------Y-NA---EKAEQAINDGLADMIGFG 322 (365)
T ss_dssp SS---------C-CH---HHHHHHHHTTSCSEEECC
T ss_pred CC---------C-CH---HHHHHHHHCCCcceehhc
Confidence 43 3 33 3456778888 9999996
No 319
>2dpr_A CON-T(K7GLA); conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Synthetic} PDB: 1ont_A*
Probab=36.76 E-value=26 Score=21.33 Aligned_cols=15 Identities=53% Similarity=0.461 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHH
Q 010443 59 EYQQETLNNLRAAMH 73 (510)
Q Consensus 59 ~~~~~~i~~ir~~~~ 73 (510)
++.+++++++|++.-
T Consensus 3 eeyqemlenlreaev 17 (26)
T 2dpr_A 3 EEYQEMLENLREAEV 17 (26)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 677899999999864
No 320
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=36.64 E-value=62 Score=32.36 Aligned_cols=46 Identities=13% Similarity=0.119 Sum_probs=34.1
Q ss_pred HHHHHHH-hCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEEEecC
Q 010443 37 MLEKLLR-AGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDT 85 (510)
Q Consensus 37 ~l~~li~-~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 85 (510)
..+++++ +|.+.+.+++.|++.++-.+.++.+|++. |.-+.+++|.
T Consensus 149 ~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g~~~~l~vDa 195 (370)
T 1nu5_A 149 SALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV---GDRASVRVDV 195 (370)
T ss_dssp HHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH---GGGCEEEEEC
T ss_pred HHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc---CCCCEEEEEC
Confidence 3466778 99999999999998887778888888764 2223455554
No 321
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=36.53 E-value=45 Score=31.04 Aligned_cols=100 Identities=10% Similarity=0.120 Sum_probs=58.2
Q ss_pred HHHhccCcCCCCEEEEcCCC-CHHHHHHHHHHhccCCCCceEEE---EecC------HHHHhchHHHHhh-----cCeeE
Q 010443 197 DILRWGVPNNIDMIALSFVR-KGSDLVNVRKVLGPHAKNIQLMS---KVEN------QEGVVNFDDILRE-----TDSFM 261 (510)
Q Consensus 197 di~~~a~~~g~d~I~~sfV~-sa~dv~~vr~~l~~~~~~~~Iia---kIEt------~~av~nldeI~~~-----~DgI~ 261 (510)
+..+.+.+.|+|+|=+..-. +..++.++++.+.+.|-.+..+. -+-+ .++++.+...++. ++.+.
T Consensus 22 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~ 101 (275)
T 3qc0_A 22 EAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLV 101 (275)
T ss_dssp HHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEE
T ss_pred HHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 33377889999999886421 35678888888887764333222 1211 2344555555554 35666
Q ss_pred EeCCcccC-CCC----chhHHHHHHHHHHHHHHcCCCeEE
Q 010443 262 VARGDLGM-EIP----VEKIFLAQKMMIYKCNLVGKPVVT 296 (510)
Q Consensus 262 IgrgDLg~-e~~----~~~v~~~qk~ii~~~~~~gkpviv 296 (510)
+..|...- +.+ ++.+...-+++...|.++|..+.+
T Consensus 102 ~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 141 (275)
T 3qc0_A 102 LVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAI 141 (275)
T ss_dssp EECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 66654421 112 234555556777777888877665
No 322
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=36.50 E-value=63 Score=32.74 Aligned_cols=62 Identities=13% Similarity=0.216 Sum_probs=40.8
Q ss_pred CeEEEEecCCC--CCCHHH----HHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEEEecC
Q 010443 21 KTKIVCTLGPA--SRSVPM----LEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDT 85 (510)
Q Consensus 21 ~tkIi~TiGp~--~~~~~~----l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 85 (510)
+....++.|.. ..+++. .+++.+.|.+.+.|+..|++.++-.+.++.+|++. |.-+.|++|.
T Consensus 150 ~v~~y~~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g~~~~l~vDa 217 (392)
T 1tzz_A 150 RVFVYAAGGYYYPGKGLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEI---GKDAQLAVDA 217 (392)
T ss_dssp EEEEEEECCCC----CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHH---TTTCEEEEEC
T ss_pred CeeEEEeCCcccCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhc---CCCCeEEEEC
Confidence 34555554431 124443 46678899999999999988887778888888764 3334455555
No 323
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=36.40 E-value=59 Score=33.04 Aligned_cols=99 Identities=13% Similarity=0.066 Sum_probs=58.0
Q ss_pred CCCChhcHHHHHhccCcCCCCEEEEcCCCC--------------------------HHHHHHHHHHhccCCCCceEEE--
Q 010443 188 PTLTEKDKEDILRWGVPNNIDMIALSFVRK--------------------------GSDLVNVRKVLGPHAKNIQLMS-- 239 (510)
Q Consensus 188 p~lt~~D~~di~~~a~~~g~d~I~~sfV~s--------------------------a~dv~~vr~~l~~~~~~~~Iia-- 239 (510)
|.+++.|..++.+.+.+.|+|+|.++--.. -+.+.++++.+ +.++.||+
T Consensus 229 p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v---~~~ipvI~~G 305 (367)
T 3zwt_A 229 PDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALT---QGRVPIIGVG 305 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHT---TTCSCEEEES
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHc---CCCceEEEEC
Confidence 446767777776777889999999874321 13444555544 23566665
Q ss_pred EecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCC
Q 010443 240 KVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKP 293 (510)
Q Consensus 240 kIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkp 293 (510)
-|.|.+-+. +-|..-+|++++||+=|-- +..-+..+.+.+-..+.+.|..
T Consensus 306 GI~s~~da~--~~l~~GAd~V~vgra~l~~--gP~~~~~i~~~l~~~m~~~G~~ 355 (367)
T 3zwt_A 306 GVSSGQDAL--EKIRAGASLVQLYTALTFW--GPPVVGKVKRELEALLKEQGFG 355 (367)
T ss_dssp SCCSHHHHH--HHHHHTCSEEEESHHHHHH--CTHHHHHHHHHHHHHHHHTTCS
T ss_pred CCCCHHHHH--HHHHcCCCEEEECHHHHhc--CcHHHHHHHHHHHHHHHHcCCC
Confidence 366654442 2222348999999976421 2334445555555555555543
No 324
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=36.29 E-value=89 Score=39.08 Aligned_cols=118 Identities=9% Similarity=0.015 Sum_probs=71.5
Q ss_pred HHHHhccCcCCCCE--EEEcCCC-CHHHHHHHHHHhccCCCCceEEEEecCH-HHHhchHHHHhh-cCeeE---EeCCcc
Q 010443 196 EDILRWGVPNNIDM--IALSFVR-KGSDLVNVRKVLGPHAKNIQLMSKVENQ-EGVVNFDDILRE-TDSFM---VARGDL 267 (510)
Q Consensus 196 ~di~~~a~~~g~d~--I~~sfV~-sa~dv~~vr~~l~~~~~~~~IiakIEt~-~av~nldeI~~~-~DgI~---IgrgDL 267 (510)
+.+ +.+++.|++. |.+++=. +.++ +.+++++. .+.++..+-+. +|.+....+.+. +|+|+ +--+|=
T Consensus 657 ~~~-~~~~~~gv~i~gv~~~~G~p~~e~---~~~~l~~~--gi~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~ea 730 (2060)
T 2uva_G 657 PLL-GRLRADGVPIEGLTIGAGVPSIEV---ANEYIQTL--GIRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGRG 730 (2060)
T ss_dssp HHH-HHHHTTTCCEEEEEEESSCCCHHH---HHHHHHHS--CCSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTS
T ss_pred HHH-HHHHHcCCCcceEeecCCCCCHHH---HHHHHHHc--CCeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccC
Confidence 445 6778899998 7777654 3333 34455544 35666666543 344444445554 79998 554555
Q ss_pred cCCCCchhHHHHHHHHHHHHHH-cCCCeEEehhhhHhhhcCCCCChHhHHHHHHHH-----------HcCCceEEe
Q 010443 268 GMEIPVEKIFLAQKMMIYKCNL-VGKPVVTATQMLESMIKSPRPTRAEATDVANAV-----------LDGTDCVML 331 (510)
Q Consensus 268 g~e~~~~~v~~~qk~ii~~~~~-~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av-----------~~G~D~imL 331 (510)
|-+.+.+++....-.++...++ .+.|+|.|..+- .-.|++.++ ..|||++++
T Consensus 731 GGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~------------~g~~i~aaltg~ws~~~g~palGAdgV~~ 794 (2060)
T 2uva_G 731 GGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFG------------GSEDTYPYLTGSWSTKFGYPPMPFDGCMF 794 (2060)
T ss_dssp SSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCC------------SHHHHHHHHHTCGGGTTTSCCCCCSCEEE
T ss_pred CCCCCcccccchHHHHHHHHHHHcCCCEEEeCCCC------------CHHHHHHHhcCcchhhcCCCCCCCCEEEE
Confidence 5555543222222233333333 479999886643 356889999 899999998
No 325
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=36.26 E-value=33 Score=28.41 Aligned_cols=41 Identities=15% Similarity=-0.001 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEE
Q 010443 382 LASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 382 ia~~av~~A~~~~a~aIvv~T~sG~tA~~iSr~RP~~PIiav 423 (510)
.+...++.|.+.+++.||+-++.-.++..+.+.-| |||+.+
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~g~sv~~~vl~~a~-~PVlvv 137 (138)
T 1q77_A 97 LSEEVKKFVEGKGYELVVWACYPSAYLCKVIDGLN-LASLIV 137 (138)
T ss_dssp HHHHHHHHHTTSCCSEEEECSCCGGGTHHHHHHSS-SEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHhCC-CceEee
Confidence 55566788899999988887764356777777755 999986
No 326
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=36.02 E-value=1e+02 Score=30.36 Aligned_cols=127 Identities=13% Similarity=0.106 Sum_probs=71.4
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCC-Ch--Hh----HHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHH
Q 010443 281 KMMIYKCNLVGKPVVTATQMLESMIKSPRP-TR--AE----ATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 353 (510)
Q Consensus 281 k~ii~~~~~~gkpvivaTqmLeSM~~~~~P-tr--aE----v~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 353 (510)
.-+..+|+..|.++.+.. -.. .| .. .| ...+...-..|++.+....+.. ...+..+.+.+.++..
T Consensus 82 ~alA~~a~~~G~~~~iv~------p~~-~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~-~~~~~~~~~~a~~l~~ 153 (341)
T 1f2d_A 82 RMVAALAAKLGKKCVLIQ------EDW-VPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFD-IGMRKSFANALQELED 153 (341)
T ss_dssp HHHHHHHHHHTCEEEEEE------ECC-SCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCC-SSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCceEEEe------ccC-CCccccccccccccccHHHHHhCCCEEEEeCCccc-hhHHHHHHHHHHHHHh
Confidence 345677999999987631 111 11 00 11 2244556668999877654321 1122355566666544
Q ss_pred HHhcccchHHH-HHHHHhcCCCCCCchHHHHHHHHHHHHhc-----CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 354 EAESSLDYRAV-FKEMIRSTPLPMSPLESLASSAVRTANKA-----RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 354 ~aE~~~~~~~~-~~~~~~~~~~~~~~~~~ia~~av~~A~~~-----~a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
+-...+.+... |. .|... ......+.++.+++ ..+.||+..-+|.|+.-+++ .+|...|+++
T Consensus 154 ~~~~~~~i~~~~~~-------np~~~-~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigV 225 (341)
T 1f2d_A 154 AGHKPYPIPAGCSE-------HKYGG-LGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAI 225 (341)
T ss_dssp TTCCEEEECGGGTT-------STTTT-THHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEE
T ss_pred cCCcEEEeCCCcCC-------CCccH-HHHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEE
Confidence 32212222111 11 12212 23344556666655 47999999999999777665 4689999999
No 327
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=36.01 E-value=2e+02 Score=29.42 Aligned_cols=52 Identities=12% Similarity=0.167 Sum_probs=34.0
Q ss_pred EEEecCHHHHhchHHHHhh--cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010443 238 MSKVENQEGVVNFDDILRE--TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 296 (510)
Q Consensus 238 iakIEt~~av~nldeI~~~--~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviv 296 (510)
|+-=|+......+.++++. +|.+.+..+-.|- + .--++|...|+++|.|+..
T Consensus 255 Ia~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GG---i----t~~~kia~~A~~~gi~v~~ 308 (412)
T 4e4u_A 255 IATGERLTTKYEFHKLLQAGGASILQLNVARVGG---L----LEAKKIATLAEVHYAQIAP 308 (412)
T ss_dssp EEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTS---H----HHHHHHHHHHHHTTCEECC
T ss_pred EEecCccCCHHHHHHHHHcCCCCEEEeCccccCC---H----HHHHHHHHHHHHcCCEEEe
Confidence 3445776677777777664 6888875443332 2 2236788999999999753
No 328
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=35.93 E-value=2.1e+02 Score=27.83 Aligned_cols=115 Identities=17% Similarity=0.195 Sum_probs=67.2
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.++.+-. |..+....+...-..|++.+...+. | .++.+...++..+-... |
T Consensus 88 alA~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~l~~~~~~~--~ 148 (323)
T 1v71_A 88 AIALSAKILGIPAKIIM-----------PLDAPEAKVAATKGYGGQVIMYDRY-----K-DDREKMAKEISEREGLT--I 148 (323)
T ss_dssp HHHHHHHHTTCCEEEEE-----------ETTCCHHHHHHHHHTTCEEEEECTT-----T-TCHHHHHHHHHHHHTCB--C
T ss_pred HHHHHHHHcCCCEEEEC-----------CCCCcHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhcCCE--e
Confidence 45677899999987631 2222223455666789998766543 2 23455555554432211 1
Q ss_pred HHHHHHHHhcCCCCCCchHHHHHHHHHHHHhc-CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPLESLASSAVRTANKA-RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~-~a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
-..| ..| .....-...+.++.+++ +.+.||+.+-+|.|+.-+++ ++|...|+++
T Consensus 149 i~~~-------~n~-~~~~g~~t~~~Ei~~q~~~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigv 207 (323)
T 1v71_A 149 IPPY-------DHP-HVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGV 207 (323)
T ss_dssp CCSS-------SSH-HHHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred cCCC-------CCc-chhhhHhHHHHHHHHhcCCCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEE
Confidence 0000 000 01122233466666666 47999999999999776665 5699999999
No 329
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=35.87 E-value=93 Score=31.66 Aligned_cols=74 Identities=12% Similarity=0.166 Sum_probs=45.6
Q ss_pred cccccccccCCCCCCCCCeEEEEecCCCCCCHH----HHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcC-Cc
Q 010443 4 IDIEGLLRDVPNDKRLPKTKIVCTLGPASRSVP----MLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQ-IL 78 (510)
Q Consensus 4 ~~~~~~~~~~p~~~~~~~tkIi~TiGp~~~~~~----~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~-~~ 78 (510)
.-+.++|+...+ .+...-+|+|- .+++ ..+++++.|.+.+.+.+...+.++-.+.++.+|++. + .-
T Consensus 140 ~Pl~~LLGg~~r----~~v~~y~s~~~--~~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a~---gg~~ 210 (391)
T 4e8g_A 140 VRVADLLGGVAA----ERVPSYYATGI--GQPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWERI---RGTG 210 (391)
T ss_dssp CBGGGGTTCCSC----SEEECCEEECS--CCHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHHHHH---TTTT
T ss_pred ChHHHhcCCCCC----CcEEEeEEcCC--CCHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHHh---CCCC
Confidence 345567764322 23455567763 2444 345577899999999998767777666777776654 3 33
Q ss_pred EEEEecCC
Q 010443 79 CAVMLDTK 86 (510)
Q Consensus 79 v~i~~Dl~ 86 (510)
+.|++|-.
T Consensus 211 ~~L~vDaN 218 (391)
T 4e8g_A 211 TRLAVDGN 218 (391)
T ss_dssp CEEEEECT
T ss_pred CeEEEeCC
Confidence 45555543
No 330
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=35.82 E-value=51 Score=32.14 Aligned_cols=97 Identities=12% Similarity=0.194 Sum_probs=58.0
Q ss_pred HHHhccCcCCCCEEEEc------CCCCHHHHHHHHH-HhccCCCCceEEEEec---CHHHHhchHHHHhh-cCeeEEeCC
Q 010443 197 DILRWGVPNNIDMIALS------FVRKGSDLVNVRK-VLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARG 265 (510)
Q Consensus 197 di~~~a~~~g~d~I~~s------fV~sa~dv~~vr~-~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~DgI~Igrg 265 (510)
.+.++.++.|+|++++. +.-|.++=.++-+ ..+..+.++++|+-+= |.++++......+. +|++++-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITP 105 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 33377889999999873 3344444444433 3434445788999884 47777766665554 799998765
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 266 DLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 266 DLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.+.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 106 ~y~~-~s~~~l~~~f~~i---a~a~~lPiilY 133 (291)
T 3a5f_A 106 YYNK-TTQKGLVKHFKAV---SDAVSTPIIIY 133 (291)
T ss_dssp CSSC-CCHHHHHHHC-CT---GGGCCSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 4422 2333433333343 44557888874
No 331
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=35.78 E-value=73 Score=31.78 Aligned_cols=46 Identities=13% Similarity=0.236 Sum_probs=33.9
Q ss_pred HHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEEEecC
Q 010443 37 MLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDT 85 (510)
Q Consensus 37 ~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 85 (510)
..+++.+.|.+.+.+++.|++.++-.+.++.+|++. |.-+.|++|.
T Consensus 147 ~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~---g~~~~l~vDa 192 (366)
T 1tkk_A 147 DAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRV---GSAVKLRLDA 192 (366)
T ss_dssp HHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHH---CSSSEEEEEC
T ss_pred HHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHh---CCCCeEEEEC
Confidence 345678899999999999988887778888888764 3334455554
No 332
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=35.72 E-value=1.9e+02 Score=27.97 Aligned_cols=115 Identities=17% Similarity=0.163 Sum_probs=65.2
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.++.+- .|....-..+...-..|++.+...+. | .++.+...++..+- ..+ |
T Consensus 79 alA~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~~~~~~-~~~-~ 139 (311)
T 1ve5_A 79 GVAYAAQVLGVKALVV-----------MPEDASPYKKACARAYGAEVVDRGVT-----A-KNREEVARALQEET-GYA-L 139 (311)
T ss_dssp HHHHHHHHHTCCEEEE-----------CCCC--CCHHHHHHHTTCEEECTTCC-----T-TTHHHHHHHHHHHH-CCE-E
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhc-CcE-e
Confidence 4566789999999763 22222222445566679987644332 3 34566666654432 111 1
Q ss_pred HHHHHHHHhcCCCCCCchHHHHHHHHHHHHhc-----CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPLESLASSAVRTANKA-----RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~-----~a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
-..| ..| .....-...+.++..++ +.+.||+.+-+|.++.-+++ ..|...|+++
T Consensus 140 ~~~~-------~n~-~~~~g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigv 202 (311)
T 1ve5_A 140 IHPF-------DDP-LVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGV 202 (311)
T ss_dssp CCSS-------SSH-HHHHHHHHHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred cCCC-------CCc-chhhhccHHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEE
Confidence 0000 001 01122233445555554 47899999999999776664 4799999999
No 333
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=35.71 E-value=48 Score=28.06 Aligned_cols=42 Identities=12% Similarity=0.233 Sum_probs=32.9
Q ss_pred HHHHHHHHH-HHhcCCcEEEEEcCC--------chHHHHHHhhCCCCcEEEE
Q 010443 381 SLASSAVRT-ANKARAKLIVVLTRG--------GTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 381 ~ia~~av~~-A~~~~a~aIvv~T~s--------G~tA~~iSr~RP~~PIiav 423 (510)
..+...++. |.+.+++.||+-++. |.++..+.+.- +|||+.+
T Consensus 105 ~~~~~I~~~~a~~~~~DlIV~G~~g~~~~~~~~Gs~~~~vl~~a-~~PVlvV 155 (156)
T 3fg9_A 105 DVDDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKA-PISVIVV 155 (156)
T ss_dssp CHHHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHHHC-SSEEEEE
T ss_pred CHHHHHHHHHHHhcCCCEEEECCCCCCccceeecchHHHHHHhC-CCCEEEe
Confidence 455666777 889999999998862 77888888764 5999987
No 334
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=35.46 E-value=1.2e+02 Score=26.98 Aligned_cols=59 Identities=22% Similarity=0.432 Sum_probs=38.0
Q ss_pred EecCCCEEEEEec----CCCCCCccEEecCCCCccc--cCCCCCEEEEe--CCe-EEEEEEEEeCCCCeE
Q 010443 102 QLKEGQEITVSTD----YDFKGNEEMITMSYKKLPV--DVKPGNTILCA--DGT-ITLTVLSCDPKSGTV 162 (510)
Q Consensus 102 ~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~~--~v~~gd~i~id--DG~-i~l~V~~~~~~~~~i 162 (510)
-.+.|++..|+.. |...+......++-..|.. .+++|+.+.+. +|. +..+|++++ ++.+
T Consensus 46 Gm~~Ge~~~v~ipp~~aYG~~~~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~--~~~v 113 (158)
T 3cgm_A 46 GREEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVE--GEEV 113 (158)
T ss_dssp TCBTTCEEEEEECGGGTTCCCCGGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEEE--TTEE
T ss_pred CCCCCCEEEEEECcHHHcCCCCcceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEEC--CCEE
Confidence 3568888888765 2223334445555555543 68999999997 465 467788885 4444
No 335
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=35.34 E-value=1.5e+02 Score=29.23 Aligned_cols=171 Identities=13% Similarity=0.138 Sum_probs=0.0
Q ss_pred cHHHHHhccCcCCCCEEEEc---------CCC-----CHHHHHHHHHHhccCCCCceEEEE--ecCHHHHhchHHHHhh-
Q 010443 194 DKEDILRWGVPNNIDMIALS---------FVR-----KGSDLVNVRKVLGPHAKNIQLMSK--VENQEGVVNFDDILRE- 256 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~s---------fV~-----sa~dv~~vr~~l~~~~~~~~Iiak--IEt~~av~nldeI~~~- 256 (510)
+.+.. +..-+.|++.|.+= |-. +.++++++++.+ ++++++| |-. ++....+.+.
T Consensus 30 ~~e~A-~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v-----~iPvl~k~~i~~---ide~qil~aaG 100 (297)
T 4adt_A 30 NVEQA-KIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI-----SINVLAKVRIGH---FVEAQILEELK 100 (297)
T ss_dssp SHHHH-HHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC-----CSEEEEEEETTC---HHHHHHHHHTT
T ss_pred cHHHH-HHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc-----CCCEEEeccCCc---HHHHHHHHHcC
Q ss_pred cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHH--cCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccC
Q 010443 257 TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNL--VGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGE 334 (510)
Q Consensus 257 ~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~--~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~E 334 (510)
+|+| |....+..++ ++..+++ .|.++++-.. -..+...++..|+|.|-..++
T Consensus 101 AD~I-----d~s~~~~~~~-------li~~i~~~~~g~~vvv~v~--------------~~~Ea~~a~~~Gad~I~v~g~ 154 (297)
T 4adt_A 101 VDML-----DESEVLTMAD-------EYNHINKHKFKTPFVCGCT--------------NLGEALRRISEGASMIRTKGE 154 (297)
T ss_dssp CSEE-----EEETTSCCSC-------SSCCCCGGGCSSCEEEEES--------------SHHHHHHHHHHTCSEEEECCC
T ss_pred CCEE-----EcCCCCCHHH-------HHHHHHhcCCCCeEEEEeC--------------CHHHHHHHHhCCCCEEEECCC
Q ss_pred CCCCCCHHHHHHHHHHHHHHH---------------hcccchHHHHHHHHhcCCCCCC--chHHH-HHHHHHHHHhcCCc
Q 010443 335 SAAGAYPEIAVKIMRRICIEA---------------ESSLDYRAVFKEMIRSTPLPMS--PLESL-ASSAVRTANKARAK 396 (510)
Q Consensus 335 ta~G~yP~~~V~~m~~i~~~a---------------E~~~~~~~~~~~~~~~~~~~~~--~~~~i-a~~av~~A~~~~a~ 396 (510)
-..| .=.++|+++..+..+. -..-.-..+..++....+.|.- ..--| ...-+..+...+|+
T Consensus 155 ~gTG-~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~GAd 233 (297)
T 4adt_A 155 AGTG-NIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLGMD 233 (297)
T ss_dssp TTSC-CCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTTCS
T ss_pred cCCC-chHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcCCC
Q ss_pred EEEE
Q 010443 397 LIVV 400 (510)
Q Consensus 397 aIvv 400 (510)
++++
T Consensus 234 gVlV 237 (297)
T 4adt_A 234 GVFV 237 (297)
T ss_dssp CEEE
T ss_pred EEEE
No 336
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=35.28 E-value=2.4e+02 Score=25.11 Aligned_cols=121 Identities=11% Similarity=0.011 Sum_probs=64.6
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHH
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLA 279 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~ 279 (510)
+.+.+.|+|+| ++-.-..+-++.+++ . ++.+++-+-|++-+.. ..-.-+|.+-+-++.+. ++
T Consensus 77 ~~a~~~Gad~i-v~~~~~~~~~~~~~~----~--g~~vi~g~~t~~e~~~--a~~~Gad~vk~~~~~~~---g~------ 138 (205)
T 1wa3_A 77 RKAVESGAEFI-VSPHLDEEISQFCKE----K--GVFYMPGVMTPTELVK--AMKLGHTILKLFPGEVV---GP------ 138 (205)
T ss_dssp HHHHHHTCSEE-ECSSCCHHHHHHHHH----H--TCEEECEECSHHHHHH--HHHTTCCEEEETTHHHH---HH------
T ss_pred HHHHHcCCCEE-EcCCCCHHHHHHHHH----c--CCcEECCcCCHHHHHH--HHHcCCCEEEEcCcccc---CH------
Confidence 45677899999 554445444433332 2 4677876656543221 11112677766432211 11
Q ss_pred HHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCC---HHHHHHHHHHHHH
Q 010443 280 QKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAY---PEIAVKIMRRICI 353 (510)
Q Consensus 280 qk~ii~~~~~~-gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~y---P~~~V~~m~~i~~ 353 (510)
..+-+.+... +.|++.+..+ +. .++..+...|+|++....-... .. |.+.++.+.++++
T Consensus 139 -~~~~~l~~~~~~~pvia~GGI----------~~---~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~~~~~~ 201 (205)
T 1wa3_A 139 -QFVKAMKGPFPNVKFVPTGGV----------NL---DNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAFVEKIR 201 (205)
T ss_dssp -HHHHHHHTTCTTCEEEEBSSC----------CT---TTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHhCCCCcEEEcCCC----------CH---HHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHHHHHHH
Confidence 1111122233 6777764432 21 2567778889999998654333 45 6666666655543
No 337
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=35.21 E-value=63 Score=31.40 Aligned_cols=53 Identities=9% Similarity=0.083 Sum_probs=41.0
Q ss_pred HHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCee
Q 010443 36 PMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEI 90 (510)
Q Consensus 36 ~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp~i 90 (510)
+..++|++.|+++.=+|+-....++..++..-++...+..+.| |.+|+.-|++
T Consensus 38 ~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~p--isIDT~~~~v 90 (271)
T 2yci_X 38 EWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLP--CCLDSTNPDA 90 (271)
T ss_dssp HHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCCC--EEEECSCHHH
T ss_pred HHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCCe--EEEeCCCHHH
Confidence 4457799999999999998777788888888888887766655 5568774443
No 338
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=35.21 E-value=54 Score=28.40 Aligned_cols=41 Identities=20% Similarity=0.380 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 010443 382 LASSAVRTANKARAKLIVVLTR---------GGTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 382 ia~~av~~A~~~~a~aIvv~T~---------sG~tA~~iSr~RP~~PIiav 423 (510)
.+...++.|.+.+++.||+-++ -|.++..+.+.-| |||+.+
T Consensus 112 ~~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a~-~pVlvv 161 (175)
T 2gm3_A 112 PKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAE-CPVMTI 161 (175)
T ss_dssp HHHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCS-SCEEEE
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCCC-CCEEEE
Confidence 4556677888999999998875 2566777777755 999999
No 339
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=35.09 E-value=52 Score=32.05 Aligned_cols=46 Identities=15% Similarity=0.159 Sum_probs=36.4
Q ss_pred HhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 247 VVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 247 v~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.+.++++++.+|++.|+.|=|. ++........++.++++++|+++-
T Consensus 49 ~~e~~e~~~~a~alvIn~G~l~-----~~~~~~~~~a~~~a~~~~~PvVlD 94 (273)
T 3dzv_A 49 PREFPQMFQQTSALVLNLGHLS-----QEREQSLLAASDYARQVNKLTVVD 94 (273)
T ss_dssp GGGHHHHHTTCSEEEEECCSCC-----HHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCeEEEecCCCC-----hHHHHHHHHHHHHHHHcCCcEEEc
Confidence 5678888889999999988762 344566677778899999999874
No 340
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=34.89 E-value=1.8e+02 Score=31.08 Aligned_cols=185 Identities=16% Similarity=0.072 Sum_probs=109.4
Q ss_pred CCChhcHHHHHhccCcCCCCEEEEcC----------CCCHHHHHHHHHHhccCCCCceEEEEec--CHHHHh--------
Q 010443 189 TLTEKDKEDILRWGVPNNIDMIALSF----------VRKGSDLVNVRKVLGPHAKNIQLMSKVE--NQEGVV-------- 248 (510)
Q Consensus 189 ~lt~~D~~di~~~a~~~g~d~I~~sf----------V~sa~dv~~vr~~l~~~~~~~~IiakIE--t~~av~-------- 248 (510)
.++..|+..|.+...+.|++.|=+-+ + +.++.+.++.+.+. ..++.+.+.+= +..|..
T Consensus 43 ~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl-~~d~~e~lr~l~~~-~~~~~l~~L~R~~N~~G~~~ypddv~~ 120 (539)
T 1rqb_A 43 RMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFL-NEDPWERLRTFRKL-MPNSRLQMLLRGQNLLGYRHYNDEVVD 120 (539)
T ss_dssp CCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTS-CCCHHHHHHHHHHH-CTTSCEEEEECGGGTTSSSCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhcc-CCCHHHHHHHHHHh-CCCCEEEEEeccccccCcccCcccccH
Confidence 46777777765666778999988753 2 45555555554332 24566666652 111221
Q ss_pred -chHHHHhh-cCeeEE--eCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHH
Q 010443 249 -NFDDILRE-TDSFMV--ARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVL 323 (510)
Q Consensus 249 -nldeI~~~-~DgI~I--grgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~ 323 (510)
+++..++. .|.|-| +-.|+ .-.+..++.++++|+.+-.+= |+...+.=+...+.+++. +..
T Consensus 121 ~~ve~a~~aGvd~vrIf~s~sd~----------~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~ 186 (539)
T 1rqb_A 121 RFVDKSAENGMDVFRVFDAMNDP----------RNMAHAMAAVKKAGKHAQGTI----CYTISPVHTVEGYVKLAGQLLD 186 (539)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCT----------HHHHHHHHHHHHTTCEEEEEE----ECCCSTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEEEehhHH----------HHHHHHHHHHHHCCCeEEEEE----EeeeCCCCCHHHHHHHHHHHHH
Confidence 23444433 464443 22232 234688899999999872110 223444446777777777 567
Q ss_pred cCCceEEeccCCCCCCCHHHHHHHHHHHHHHH--hcccchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEE
Q 010443 324 DGTDCVMLSGESAAGAYPEIAVKIMRRICIEA--ESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVL 401 (510)
Q Consensus 324 ~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~a--E~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~ 401 (510)
.|+|.|.|. +|+=+..|.++-+.+..+.++. .-.+.. |++ . ..-+|.+...+|-..||+ +|=-
T Consensus 187 ~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~--H~H-----n------d~GlAvAN~laAveAGa~-~VD~ 251 (539)
T 1rqb_A 187 MGADSIALK-DMAALLKPQPAYDIIKAIKDTYGQKTQINL--HCH-----S------TTGVTEVSLMKAIEAGVD-VVDT 251 (539)
T ss_dssp TTCSEEEEE-ETTCCCCHHHHHHHHHHHHHHHCTTCCEEE--EEB-----C------TTSCHHHHHHHHHHTTCS-EEEE
T ss_pred cCCCEEEeC-CCCCCcCHHHHHHHHHHHHHhcCCCceEEE--EeC-----C------CCChHHHHHHHHHHhCCC-EEEE
Confidence 799999997 7887888999999988887655 211111 000 0 123555566677778998 4544
Q ss_pred cCC
Q 010443 402 TRG 404 (510)
Q Consensus 402 T~s 404 (510)
|-.
T Consensus 252 ti~ 254 (539)
T 1rqb_A 252 AIS 254 (539)
T ss_dssp BCG
T ss_pred ecc
Confidence 533
No 341
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=34.89 E-value=1.3e+02 Score=26.21 Aligned_cols=60 Identities=12% Similarity=0.206 Sum_probs=39.5
Q ss_pred EecCCCEEEEEec----CCCCCCccEEecCCCCcc-ccCCCCCEEEEe--CCe-EEEEEEEEeCCCCeEE
Q 010443 102 QLKEGQEITVSTD----YDFKGNEEMITMSYKKLP-VDVKPGNTILCA--DGT-ITLTVLSCDPKSGTVR 163 (510)
Q Consensus 102 ~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~-~~v~~gd~i~id--DG~-i~l~V~~~~~~~~~i~ 163 (510)
-.+.|++..|+.. |...+......++-..|. ..+++|+.+.+. ||. +..+|++++ ++.++
T Consensus 56 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~v~--~~~v~ 123 (151)
T 2kr7_A 56 KAQIGEWEEVVIAPEEAYGVYESSYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKDFS--ATHVM 123 (151)
T ss_dssp TCCBTCEEEEEECGGGTTCSSCSCEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEEEC--SSEEE
T ss_pred CCCCCCEEEEEEecHHHcCCCCcceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEEEC--CCEEE
Confidence 4578998888865 333344444556655552 368999999987 575 667789884 45543
No 342
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=34.73 E-value=1.5e+02 Score=29.44 Aligned_cols=129 Identities=18% Similarity=0.207 Sum_probs=66.7
Q ss_pred CCChhcHHHHH-------hccCcCCCCEEEEcCC-------------CC----------------HHHHHHHHHHhccCC
Q 010443 189 TLTEKDKEDIL-------RWGVPNNIDMIALSFV-------------RK----------------GSDLVNVRKVLGPHA 232 (510)
Q Consensus 189 ~lt~~D~~di~-------~~a~~~g~d~I~~sfV-------------~s----------------a~dv~~vr~~l~~~~ 232 (510)
.||..|++.+. +.+.+.|+|+|=+-.. +. .|-++++|+.+ |
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~av---G 217 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVV---P 217 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHS---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHh---c
Confidence 57777777663 3567899999877433 22 12233333333 5
Q ss_pred CCceEEEEecC----------HHHHhchHHHHhh-cCeeEEeCCcccCCCCchhHHHHHHHHHHHHH-HcCCCeEEehhh
Q 010443 233 KNIQLMSKVEN----------QEGVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCN-LVGKPVVTATQM 300 (510)
Q Consensus 233 ~~~~IiakIEt----------~~av~nldeI~~~-~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~-~~gkpvivaTqm 300 (510)
.+..|..||-. .+.++-+..+.+. .|.|-+.-|...-+...+.-+..+-..++..+ ..+.|++....+
T Consensus 218 ~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi 297 (349)
T 3hgj_A 218 RELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLI 297 (349)
T ss_dssp TTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSC
T ss_pred CCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCC
Confidence 56778888843 1222222333332 58888875443222110000001112222222 347898864332
Q ss_pred hHhhhcCCCCChHhHHHHHHHHHcC-CceEEec
Q 010443 301 LESMIKSPRPTRAEATDVANAVLDG-TDCVMLS 332 (510)
Q Consensus 301 LeSM~~~~~PtraEv~Dv~~av~~G-~D~imLs 332 (510)
-|.. +...++..| +|+|++.
T Consensus 298 ---------~t~e---~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 298 ---------TTPE---QAETLLQAGSADLVLLG 318 (349)
T ss_dssp ---------CCHH---HHHHHHHTTSCSEEEES
T ss_pred ---------CCHH---HHHHHHHCCCceEEEec
Confidence 2333 345677888 9999986
No 343
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=34.68 E-value=1.3e+02 Score=29.33 Aligned_cols=51 Identities=22% Similarity=0.325 Sum_probs=39.0
Q ss_pred HHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHH
Q 010443 280 QKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRR 350 (510)
Q Consensus 280 qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~ 350 (510)
-+..++.|+++|++|.+=|- + +-.++..++..|+|+|+- .||..+.+.+.+
T Consensus 257 ~~~~v~~~~~~Gl~V~~WTV------n-------~~~~~~~l~~~GVDgIiT-------D~P~~~~~~l~~ 307 (313)
T 3l12_A 257 TPELVAEAHDLGLIVLTWTV------N-------EPEDIRRMATTGVDGIVT-------DYPGRTQRILID 307 (313)
T ss_dssp CHHHHHHHHHTTCEEEEBCC------C-------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEcC------C-------CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHh
Confidence 36789999999999998761 1 224566777889999985 689888777654
No 344
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=34.49 E-value=1.3e+02 Score=28.19 Aligned_cols=102 Identities=17% Similarity=0.147 Sum_probs=58.6
Q ss_pred hcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEe---c----CHHHHhchHHHHhhcCeeEEeCC
Q 010443 193 KDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV---E----NQEGVVNFDDILRETDSFMVARG 265 (510)
Q Consensus 193 ~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakI---E----t~~av~nldeI~~~~DgI~Igrg 265 (510)
.|.+++.+.+.+.|++.++++-. +.++...+.++.+... ++....-+ + +.++++.+++.++ +.-.+|-|
T Consensus 27 ~~~~~~l~~~~~~GV~~~v~~~~-~~~~~~~~~~l~~~~p-~i~~~~G~hP~~~~~~~~~~~~~l~~~~~--~~~~~~iG 102 (268)
T 1j6o_A 27 DDRNAVISSFEENNIEFVVNVGV-NLEDSKKSLDLSKTSD-RIFCSVGVHPHDAKEVPEDFIEHLEKFAK--DEKVVAIG 102 (268)
T ss_dssp TTHHHHHHTTTTTTEEEEEEECS-SHHHHHHHHHHHTTCT-TEEEEECCCGGGGGGCCTTHHHHHHHHTT--STTEEEEE
T ss_pred cCHHHHHHHHHHcCCCEEEEeCC-CHHHHHHHHHHHHHCC-CEEEEEeeccccccccCHHHHHHHHHHhc--cCCEEEEE
Confidence 45556557778899998776543 6777777777765532 32222222 1 1133444444443 22334446
Q ss_pred cccCCCCch-hHHHHH----HHHHHHHHHcCCCeEEeh
Q 010443 266 DLGMEIPVE-KIFLAQ----KMMIYKCNLVGKPVVTAT 298 (510)
Q Consensus 266 DLg~e~~~~-~v~~~q----k~ii~~~~~~gkpvivaT 298 (510)
..|++.... .-...| ...++.|.+.|+|+++-+
T Consensus 103 e~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~ 140 (268)
T 1j6o_A 103 ETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHI 140 (268)
T ss_dssp EEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ccccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 666665431 112334 577889999999999865
No 345
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=34.42 E-value=85 Score=29.91 Aligned_cols=46 Identities=15% Similarity=0.112 Sum_probs=38.6
Q ss_pred CHHHHHHHHHhCCCeEEEeecC---------CCHHHHHHHHHHHHHHHHhcCCcE
Q 010443 34 SVPMLEKLLRAGMNVARFNFSH---------GTHEYQQETLNNLRAAMHNTQILC 79 (510)
Q Consensus 34 ~~~~l~~li~~G~~~~RiN~sh---------~~~~~~~~~i~~ir~~~~~~~~~v 79 (510)
-.+.++++++.|++++-|---+ .+.++..+..+.+++.+++++.++
T Consensus 45 ~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~l 99 (243)
T 3o63_A 45 LAQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALF 99 (243)
T ss_dssp HHHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEE
Confidence 3688999999999999998777 457888889999999999888653
No 346
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=34.36 E-value=2.8e+02 Score=26.76 Aligned_cols=90 Identities=21% Similarity=0.206 Sum_probs=55.7
Q ss_pred cCeeEEeCCccc--CCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEecc
Q 010443 257 TDSFMVARGDLG--MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 333 (510)
Q Consensus 257 ~DgI~IgrgDLg--~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~ 333 (510)
+||+++. |--| ..+..++-..+.+..++.++. ..|+++-| ...+-.|..+.+. |-..|+|++|+..
T Consensus 36 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 36 TNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVANK-RIPIIAGT---------GANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEEC-ccccccccCCHHHHHHHHHHHHHHhCC-CCeEEEeC---------CCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 7999875 2221 334455544555555555432 37887643 2445566666554 6678999999975
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhc
Q 010443 334 ESAAGAYPEIAVKIMRRICIEAES 357 (510)
Q Consensus 334 Eta~G~yP~~~V~~m~~i~~~aE~ 357 (510)
=--...-+.+.++..+.|+..+.-
T Consensus 105 P~y~~~~~~~l~~~f~~ia~a~~l 128 (291)
T 3tak_A 105 PYYNKPTQEGLYQHYKAIAEAVEL 128 (291)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCC
Confidence 433333456788888888887753
No 347
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=34.33 E-value=1.9e+02 Score=23.67 Aligned_cols=79 Identities=15% Similarity=0.157 Sum_probs=45.2
Q ss_pred HHHHHHhcCCcEEEEEc----CCch-HHHHHHhhCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCCC
Q 010443 386 AVRTANKARAKLIVVLT----RGGT-TAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEGS 460 (510)
Q Consensus 386 av~~A~~~~a~aIvv~T----~sG~-tA~~iSr~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~~ 460 (510)
|.+.......+.|++-. .+|. ..+.+.+..|.+||++++ . ........-.+..|+.-++..+.
T Consensus 53 a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s------~------~~~~~~~~~~~~~g~~~~l~Kp~ 120 (152)
T 3eul_A 53 ALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLIS------A------HDEPAIVYQALQQGAAGFLLKDS 120 (152)
T ss_dssp HHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEE------S------CCCHHHHHHHHHTTCSEEEETTC
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEE------c------cCCHHHHHHHHHcCCCEEEecCC
Confidence 33444455678777643 2443 356677778999999992 2 22222233345678888888663
Q ss_pred CcCCCccCHHHHHHHHHHHHHHcC
Q 010443 461 AKATDAESTEVILEGALKSAIEKG 484 (510)
Q Consensus 461 ~~~~~~~~~e~~i~~a~~~~~~~g 484 (510)
+.+. +..++..+.+.+
T Consensus 121 -------~~~~-l~~~i~~~~~~~ 136 (152)
T 3eul_A 121 -------TRTE-IVKAVLDCAKGR 136 (152)
T ss_dssp -------CHHH-HHHHHHHHHHCC
T ss_pred -------CHHH-HHHHHHHHHcCC
Confidence 3343 444555555444
No 348
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=34.27 E-value=1.4e+02 Score=28.84 Aligned_cols=114 Identities=17% Similarity=0.126 Sum_probs=67.8
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.++.+- .|..+....+...-..|++.+...++. . ..++++...++..+- ..+ +
T Consensus 79 a~A~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~-~~~~~~~a~~~~~~~-~~~-~ 141 (303)
T 1o58_A 79 AIAMIGAKRGHRVILT-----------MPETMSVERRKVLKMLGAELVLTPGEL---G-MKGAVEKALEISRET-GAH-M 141 (303)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHH-CCB-C
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCCC---C-HHHHHHHHHHHHHhc-CeE-e
Confidence 4567789999998763 122222344555666799987754321 1 235565555554432 111 1
Q ss_pred HHHHHHHHhcCCCC-CCchHH---HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCC-CcEEEE
Q 010443 362 RAVFKEMIRSTPLP-MSPLES---LASSAVRTANKAR--AKLIVVLTRGGTTAKLVAK----YRPA-VPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~-~~~~~~---ia~~av~~A~~~~--a~aIvv~T~sG~tA~~iSr----~RP~-~PIiav 423 (510)
..+ .++... -...+.++.++++ .+.||+.+-+|.++.-+++ ..|. ..|+++
T Consensus 142 -----------~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigv 203 (303)
T 1o58_A 142 -----------LNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAV 203 (303)
T ss_dssp -----------CCTTTCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEE
T ss_pred -----------CCCCCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEE
Confidence 001 111111 1234567777774 6999999999999777665 3588 899999
No 349
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=34.15 E-value=92 Score=28.01 Aligned_cols=44 Identities=16% Similarity=0.196 Sum_probs=36.0
Q ss_pred HHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCc
Q 010443 35 VPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQIL 78 (510)
Q Consensus 35 ~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~ 78 (510)
.+.++.+.++|++.+-+.+...+.++..+.++.+++..+.++.+
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~~v~ 72 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYDAL 72 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 47889999999999988877778888888888888877665543
No 350
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=34.11 E-value=45 Score=32.79 Aligned_cols=52 Identities=19% Similarity=0.343 Sum_probs=34.9
Q ss_pred HHHHHHHHHhCCCeEEEeecCCCHH--------------------HHHHHHHHHHHHHHhcCCcEEEEecCCCC
Q 010443 35 VPMLEKLLRAGMNVARFNFSHGTHE--------------------YQQETLNNLRAAMHNTQILCAVMLDTKGP 88 (510)
Q Consensus 35 ~~~l~~li~~G~~~~RiN~sh~~~~--------------------~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 88 (510)
.+.++.|-+.|+|++|+-++....+ ...+.++.+=+.+.+.| +.+++|+-+|
T Consensus 47 ~~~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~G--i~vild~h~~ 118 (358)
T 1ece_A 47 RSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIG--LRIILDRHRP 118 (358)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTT--CEEEEEEEES
T ss_pred HHHHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCC--CEEEEecCCC
Confidence 6788999999999999999732110 13445555545556666 4577888754
No 351
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=33.94 E-value=3.3e+02 Score=26.25 Aligned_cols=96 Identities=18% Similarity=0.167 Sum_probs=58.1
Q ss_pred HHHHhh-cCeeEEeCCccc--CCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCC
Q 010443 251 DDILRE-TDSFMVARGDLG--MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGT 326 (510)
Q Consensus 251 deI~~~-~DgI~IgrgDLg--~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~ 326 (510)
+-.++. +||+++. |--| ..+..++-..+.+..++.++ -..|++.-+ ...+-.|..+.+. |-..|+
T Consensus 30 ~~li~~Gv~gl~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~a~~~Ga 98 (292)
T 3daq_A 30 NFLLENNAQAIIVN-GTTAESPTLTTDEKELILKTVIDLVD-KRVPVIAGT---------GTNDTEKSIQASIQAKALGA 98 (292)
T ss_dssp HHHHHTTCCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhC-CCCcEEEeC---------CcccHHHHHHHHHHHHHcCC
Confidence 333433 7999985 2211 23344454444444444442 346887643 2455566666655 666799
Q ss_pred ceEEeccCCCCCCCHHHHHHHHHHHHHHHhc
Q 010443 327 DCVMLSGESAAGAYPEIAVKIMRRICIEAES 357 (510)
Q Consensus 327 D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~ 357 (510)
|++|+..=--...-+.+.++..+.|+..+.-
T Consensus 99 davlv~~P~y~~~~~~~l~~~f~~ia~a~~l 129 (292)
T 3daq_A 99 DAIMLITPYYNKTNQRGLVKHFEAIADAVKL 129 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 9999975443444467788999999888864
No 352
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=33.82 E-value=63 Score=31.59 Aligned_cols=37 Identities=19% Similarity=0.138 Sum_probs=25.7
Q ss_pred HHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHH
Q 010443 317 DVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 353 (510)
Q Consensus 317 Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~ 353 (510)
|+..+...|+|++++..--.....|.++++.+.+.+.
T Consensus 223 d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~~~~ 259 (305)
T 2nv1_A 223 DAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATT 259 (305)
T ss_dssp HHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHHHHH
Confidence 5566677899999998554444568777766665443
No 353
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=33.69 E-value=74 Score=30.49 Aligned_cols=96 Identities=11% Similarity=0.221 Sum_probs=58.9
Q ss_pred cHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEe--------cCHHHHhchHHHHhhcCeeEEeCC
Q 010443 194 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV--------ENQEGVVNFDDILRETDSFMVARG 265 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakI--------Et~~av~nldeI~~~~DgI~Igrg 265 (510)
|...+.+.+.+.|++.+++ ..+.++...+.++.... ..+++-+ +..+-++.+.+.++ .. +|=|
T Consensus 15 d~~~vl~~a~~~gV~~i~v--~~~~~~~~~~~~la~~~---~~v~~~~GiHP~~~~~~~~~l~~l~~~~~--~~--vaIG 85 (254)
T 3gg7_A 15 DPVAVARACEERQLTVLSV--TTTPAAWRGTLALAAGR---PHVWTALGFHPEVVSERAADLPWFDRYLP--ET--RFVG 85 (254)
T ss_dssp SHHHHHHHHHHTTCEEEEC--CSSGGGHHHHHGGGTTC---TTEEECBCCCGGGTTTTGGGTHHHHHHGG--GC--SEEE
T ss_pred CHHHHHHHHHHCCCcEEEe--cCCHHHHHHHHHHHHhC---CCeEEEEeeCcccccccHHHHHHHHHHhh--hc--cEEE
Confidence 5555547888899998776 46888888887766532 1122222 22233444444443 23 3446
Q ss_pred cccCCCCch--hHHHHH----HHHHHHHHHcCCCeE-Eeh
Q 010443 266 DLGMEIPVE--KIFLAQ----KMMIYKCNLVGKPVV-TAT 298 (510)
Q Consensus 266 DLg~e~~~~--~v~~~q----k~ii~~~~~~gkpvi-vaT 298 (510)
.-|.+.... .-...| ++.++.|++.++|++ +-+
T Consensus 86 EiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~ 125 (254)
T 3gg7_A 86 EVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHS 125 (254)
T ss_dssp EEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 777777543 234455 466788999999999 854
No 354
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=33.63 E-value=2.3e+02 Score=29.82 Aligned_cols=150 Identities=16% Similarity=0.227 Sum_probs=85.5
Q ss_pred cEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEeeCeEecCCCCcccCCcc-----------------
Q 010443 122 EMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVV----------------- 184 (510)
Q Consensus 122 ~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~i~~~v~~~G~l~s~K~vnlp~~~----------------- 184 (510)
+.|++|.-.+-- + .+-++++.+.++|+. +..+. .+-|.--++..+++|..-
T Consensus 121 d~ilidDG~i~l--~---V~~~~~~~i~~~v~~----gG~L~---~~KgvNlPg~~~~lp~ltekD~~Di~~~l~~gvD~ 188 (470)
T 1e0t_A 121 NTVLVDDGLIGM--E---VTAIEGNKVICKVLN----NGDLG---ENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDF 188 (470)
T ss_dssp CEEEETTTTEEE--E---EEEEETTEEEEEECS----CEEEC---SSCEEECSSCCCCCCSSCHHHHHHHHHHHHHTCSE
T ss_pred CEEEEeCCEEEE--E---EEEEeCCeEEEEEec----CcEEe---CCceeecCCCcCCCCCCCcCCHHHHHHHHHcCCCE
Confidence 457776544321 1 123467788888752 22221 233666777888887642
Q ss_pred ccCCCC-ChhcHHHHHhccCcC-CCCEEEEcCCCCHHHHHHHHHHhcc--------------------------------
Q 010443 185 VDLPTL-TEKDKEDILRWGVPN-NIDMIALSFVRKGSDLVNVRKVLGP-------------------------------- 230 (510)
Q Consensus 185 ~~lp~l-t~~D~~di~~~a~~~-g~d~I~~sfV~sa~dv~~vr~~l~~-------------------------------- 230 (510)
+-+|.. +..|...+.++..+. |.+.-+++++++++-+..+.+++..
T Consensus 189 I~lsfV~saeDv~~~~~~l~~~~~~~i~IiakIEt~eav~nldeI~~~sDgImVargDLgveig~e~v~~~qk~ii~~ar 268 (470)
T 1e0t_A 189 VAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCI 268 (470)
T ss_dssp EEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHHCCEEEECchHhhhhcCHHHHHHHHHHHHHHHH
Confidence 123433 678888885554445 6678889999999999888776531
Q ss_pred -CCCCceEEE------EecCH-----HHHhchHHHHhhcCeeEEe----CCcccCCCCchhHHHHHHHHHHHHHH
Q 010443 231 -HAKNIQLMS------KVENQ-----EGVVNFDDILRETDSFMVA----RGDLGMEIPVEKIFLAQKMMIYKCNL 289 (510)
Q Consensus 231 -~~~~~~Iia------kIEt~-----~av~nldeI~~~~DgI~Ig----rgDLg~e~~~~~v~~~qk~ii~~~~~ 289 (510)
+|+ +.|.| +|+++ |.-+=...|+.-+|++|+. .|+ +|. +-...+.+|+..+.+
T Consensus 269 aaGk-pvI~ATQMLeSMi~~p~PTRAEvsDVanAV~dG~DavMLSgETA~G~----yPv-eaV~~m~~I~~~~E~ 337 (470)
T 1e0t_A 269 RARK-VVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGK----YPL-EAVSIMATICERTDR 337 (470)
T ss_dssp HHTC-EEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC----------CH-HHHHHHHHHHHHHHT
T ss_pred HcCC-CEEEechhhHhhccCCCccHHHHhhhhHhhhcCccEEEecccccCCC----CHH-HHHHHHHHHHHHHHh
Confidence 121 22332 55543 5555667777789999984 333 343 333455666666655
No 355
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=33.63 E-value=1.8e+02 Score=29.36 Aligned_cols=72 Identities=19% Similarity=0.182 Sum_probs=47.5
Q ss_pred ccccccccCCCCCCCCCeEEEEecCCCCCCHHH----HHHHHHh-CCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcE
Q 010443 5 DIEGLLRDVPNDKRLPKTKIVCTLGPASRSVPM----LEKLLRA-GMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILC 79 (510)
Q Consensus 5 ~~~~~~~~~p~~~~~~~tkIi~TiGp~~~~~~~----l~~li~~-G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v 79 (510)
-+.++|+... .+...-+|+|- .+++. .+++++. |.+.+.+.....+.++-.+.++.+|++. |.-+
T Consensus 145 Pl~~LLGg~~-----~~v~~y~s~g~--~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~---G~~~ 214 (383)
T 3toy_A 145 PVVELLGGSA-----RPIPAYDSYGV--LDARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALL---GPDI 214 (383)
T ss_dssp BHHHHTTCCC-----CCEEEEEECSS--CCHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHH---CTTS
T ss_pred cHHHHhCCCC-----CceEEeEecCC--CCHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHh---CCCC
Confidence 3456677432 45667777764 34443 4557778 9999999998877777777777777754 3334
Q ss_pred EEEecCC
Q 010443 80 AVMLDTK 86 (510)
Q Consensus 80 ~i~~Dl~ 86 (510)
.+++|..
T Consensus 215 ~l~vDaN 221 (383)
T 3toy_A 215 ALMLDFN 221 (383)
T ss_dssp EEEEECT
T ss_pred eEEEeCC
Confidence 5555543
No 356
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=33.58 E-value=2.6e+02 Score=26.06 Aligned_cols=35 Identities=3% Similarity=-0.061 Sum_probs=26.7
Q ss_pred hccCcCCCCEEEEcCCC----CHHHHHHHHHHhccCCCC
Q 010443 200 RWGVPNNIDMIALSFVR----KGSDLVNVRKVLGPHAKN 234 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~----sa~dv~~vr~~l~~~~~~ 234 (510)
+.+.+.|+|+|=+..-. +.+++.++++.+.+.|-.
T Consensus 28 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~ 66 (290)
T 3tva_A 28 EVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQ 66 (290)
T ss_dssp HHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCE
T ss_pred HHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCE
Confidence 56678899999888643 467888999988877643
No 357
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=33.57 E-value=1.3e+02 Score=30.47 Aligned_cols=75 Identities=16% Similarity=0.196 Sum_probs=45.5
Q ss_pred cccccccccCCCCCCCCCeEEEEecCC---CCCCHH--------HHHHHHHhCCCeEEE-eecC--CCHHHHHHHHHHHH
Q 010443 4 IDIEGLLRDVPNDKRLPKTKIVCTLGP---ASRSVP--------MLEKLLRAGMNVARF-NFSH--GTHEYQQETLNNLR 69 (510)
Q Consensus 4 ~~~~~~~~~~p~~~~~~~tkIi~TiGp---~~~~~~--------~l~~li~~G~~~~Ri-N~sh--~~~~~~~~~i~~ir 69 (510)
.-+.++|+...+ .+...-+|+|+ .+.+++ ..+++.+.|.+.+.+ -+.+ .+.++-.++++.+|
T Consensus 119 ~Pv~~LLGG~~r----~~v~~y~s~~~~~~~~~~~~~~i~~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR 194 (394)
T 3mqt_A 119 VPAYKLMGGAQK----AQLTPYFTLYPSVAADATLSEIVEAYKPLIAKAKERGAKAVKVCIIPNDKVSDKEIVAYLRELR 194 (394)
T ss_dssp CBHHHHTTCCCS----SSBCCEEECCCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHH
T ss_pred CcHHHHcCCCCC----CeEEEEEEecCCCCCCcchhhhHHHHHHHHHHHHHcCCCEEEecccCCCccCHHHHHHHHHHHH
Confidence 345667775422 23455778885 233322 566788899999999 4543 45666666777777
Q ss_pred HHHHhcCCcEEEEecC
Q 010443 70 AAMHNTQILCAVMLDT 85 (510)
Q Consensus 70 ~~~~~~~~~v~i~~Dl 85 (510)
++. |.-+.|++|.
T Consensus 195 ~a~---G~d~~l~vDa 207 (394)
T 3mqt_A 195 EVI---GWDMDMMVDC 207 (394)
T ss_dssp HHH---CSSSEEEEEC
T ss_pred HHh---CCCCeEEEEC
Confidence 654 4334455554
No 358
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=33.39 E-value=1.3e+02 Score=29.84 Aligned_cols=70 Identities=23% Similarity=0.315 Sum_probs=47.4
Q ss_pred CCCeEEEEecC--CCCCC-----------HHHHHHHHHhCCCeEEEeecC---CC-----HHHHHHHHHHHHHHHHhcCC
Q 010443 19 LPKTKIVCTLG--PASRS-----------VPMLEKLLRAGMNVARFNFSH---GT-----HEYQQETLNNLRAAMHNTQI 77 (510)
Q Consensus 19 ~~~tkIi~TiG--p~~~~-----------~~~l~~li~~G~~~~RiN~sh---~~-----~~~~~~~i~~ir~~~~~~~~ 77 (510)
..+|+|++-|. |-|-+ .+..++|++.|+++.=+|.-. |. .+|+.+++.-|+...++.+.
T Consensus 7 ~~~~~iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~v 86 (314)
T 2vef_A 7 HAKTVICGIINVTPDSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDV 86 (314)
T ss_dssp CCCCEEEEEEECCC---------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCceEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCc
Confidence 36889998774 32221 345577999999999999943 22 38888888888887776655
Q ss_pred cEEEEecCCCCee
Q 010443 78 LCAVMLDTKGPEI 90 (510)
Q Consensus 78 ~v~i~~Dl~Gp~i 90 (510)
| |.+|+.=|++
T Consensus 87 p--iSIDT~~~~V 97 (314)
T 2vef_A 87 L--ISIDTWKSQV 97 (314)
T ss_dssp E--EEEECSCHHH
T ss_pred e--EEEeCCCHHH
Confidence 4 5668875543
No 359
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=33.24 E-value=86 Score=26.78 Aligned_cols=42 Identities=24% Similarity=0.252 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 010443 381 SLASSAVRTANKARAKLIVVLTR---------GGTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 381 ~ia~~av~~A~~~~a~aIvv~T~---------sG~tA~~iSr~RP~~PIiav 423 (510)
..+...++.|.+.+++.||+-++ -|.++..+.+. -+|||+.+
T Consensus 104 ~~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~-a~~PVLvV 154 (155)
T 3dlo_A 104 EPPDDIVDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILK-ANKPVICI 154 (155)
T ss_dssp CHHHHHHHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHH-CSSCEEEE
T ss_pred CHHHHHHHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHh-CCCCEEEe
Confidence 35566778899999999999874 37788888885 56999987
No 360
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=32.99 E-value=1.3e+02 Score=29.43 Aligned_cols=97 Identities=9% Similarity=0.107 Sum_probs=59.8
Q ss_pred HHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhh
Q 010443 221 LVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQM 300 (510)
Q Consensus 221 v~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqm 300 (510)
++.++++..+. .+.+++-+-.+..++-+.+ ..|.+-||.+++-- .+ +++++.+.||||++.|.|
T Consensus 78 l~~l~~~~~~~--Glp~~te~~d~~~~~~l~~---~vd~~kIgA~~~~n------~~-----Ll~~~a~~~kPV~lk~G~ 141 (292)
T 1o60_A 78 LKIFQELKDTF--GVKIITDVHEIYQCQPVAD---VVDIIQLPAFLARQ------TD-----LVEAMAKTGAVINVKKPQ 141 (292)
T ss_dssp HHHHHHHHHHH--CCEEEEECCSGGGHHHHHT---TCSEEEECGGGTTC------HH-----HHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHc--CCcEEEecCCHHHHHHHHh---cCCEEEECcccccC------HH-----HHHHHHcCCCcEEEeCCC
Confidence 44455554443 4778887777776665554 58999999766532 22 555566889999997765
Q ss_pred hHhhhcCCCCChHhHHHHHHHHH-cCCceEEeccCCCCCCCH
Q 010443 301 LESMIKSPRPTRAEATDVANAVL-DGTDCVMLSGESAAGAYP 341 (510)
Q Consensus 301 LeSM~~~~~PtraEv~Dv~~av~-~G~D~imLs~Eta~G~yP 341 (510)
- -|-.|+...+..+. .|.+-++|---+..-.|+
T Consensus 142 ~--------~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~~y~ 175 (292)
T 1o60_A 142 F--------LSPSQMGNIVEKIEECGNDKIILCDRGTNFGYD 175 (292)
T ss_dssp T--------SCGGGHHHHHHHHHHTTCCCEEEEECCEECSTT
T ss_pred C--------CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCC
Confidence 4 24457777777654 576544543222222565
No 361
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=32.90 E-value=72 Score=26.24 Aligned_cols=42 Identities=14% Similarity=0.148 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcCC------chHHHHHHhhCCCCcEEEE
Q 010443 381 SLASSAVRTANKARAKLIVVLTRG------GTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 381 ~ia~~av~~A~~~~a~aIvv~T~s------G~tA~~iSr~RP~~PIiav 423 (510)
..+...++.|.+.+++.||+-++. |.++..+.+.- +|||+.+
T Consensus 89 ~~~~~I~~~a~~~~~dliV~G~~~~~~~~lgs~~~~vl~~~-~~pVlvv 136 (141)
T 1jmv_A 89 DLGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTI-KIDMLVV 136 (141)
T ss_dssp CHHHHHHHHHHHTTCCEEEEEECCCCHHHHHHHHHHHHTTC-CSEEEEE
T ss_pred CHHHHHHHHHHhcCCCEEEEeCCCchhhhhcchHHHHHhcC-CCCEEEe
Confidence 355666788999999999998762 34566666554 5999999
No 362
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=32.87 E-value=52 Score=31.61 Aligned_cols=48 Identities=19% Similarity=0.244 Sum_probs=35.7
Q ss_pred HhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehh
Q 010443 247 VVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQ 299 (510)
Q Consensus 247 v~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTq 299 (510)
++.+.++++.+|.+.|+.|=+ -++.......+++.+++.++|+++---
T Consensus 47 ~~e~~~~~~~~dalvi~~G~~-----~~~~~~~~~~~~~~a~~~~~pvVlDpv 94 (265)
T 1v8a_A 47 EEELEEMIRLADAVVINIGTL-----DSGWRRSMVKATEIANELGKPIVLDPV 94 (265)
T ss_dssp TTTHHHHHHHCSEEEEECTTC-----CHHHHHHHHHHHHHHHHHTCCEEEECT
T ss_pred HHHHHHHHHHCCEEEEEECCC-----CHHHHHHHHHHHHHHHHcCCcEEEcCc
Confidence 556778888899999987654 334445666778888999999987433
No 363
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=32.84 E-value=1.7e+02 Score=28.67 Aligned_cols=105 Identities=11% Similarity=0.117 Sum_probs=65.9
Q ss_pred HHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEE-ec-CHHHHhchHHHHhh-cCeeEEeCCcccCCC
Q 010443 195 KEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSK-VE-NQEGVVNFDDILRE-TDSFMVARGDLGMEI 271 (510)
Q Consensus 195 ~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~Iiak-IE-t~~av~nldeI~~~-~DgI~IgrgDLg~e~ 271 (510)
+++. +...+.|+|.|++..+.+.++++++.+.+. +++++. .| .....-+.+++.+. .+.++++++=+-
T Consensus 170 i~ra-~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-----iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~--- 240 (295)
T 1xg4_A 170 IERA-QAYVEAGAEMLFPEAITELAMYRQFADAVQ-----VPILANITEFGATPLFTTDELRSAHVAMALYPLSAFR--- 240 (295)
T ss_dssp HHHH-HHHHHTTCSEEEETTCCSHHHHHHHHHHHC-----SCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHHH---
T ss_pred HHHH-HHHHHcCCCEEEEeCCCCHHHHHHHHHHcC-----CCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHHH---
Confidence 4444 455789999999999999999999998884 456654 34 12334577888776 688888754321
Q ss_pred CchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH
Q 010443 272 PVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN 320 (510)
Q Consensus 272 ~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~ 320 (510)
......++....-++.|... .+.+.| .+++|+.++..
T Consensus 241 ---aa~~a~~~~~~~i~~~g~~~----~~~~~~-----~~~~e~~~l~~ 277 (295)
T 1xg4_A 241 ---AMNRAAEHVYNVLRQEGTQK----SVIDTM-----QTRNELYESIN 277 (295)
T ss_dssp ---HHHHHHHHHHHHHHHHSSSG----GGGGGS-----CCHHHHHHHTT
T ss_pred ---HHHHHHHHHHHHHHHhCCcc----cccccC-----CCHHHHHHHcC
Confidence 12223334455555566542 223333 57888776643
No 364
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=32.75 E-value=36 Score=33.52 Aligned_cols=60 Identities=15% Similarity=0.154 Sum_probs=43.7
Q ss_pred HHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHH--HhchHHHHhh-cCeeEEe
Q 010443 195 KEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEG--VVNFDDILRE-TDSFMVA 263 (510)
Q Consensus 195 ~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~a--v~nldeI~~~-~DgI~Ig 263 (510)
.+.+ +-+++.|+|+|.+..+ ++++++++.+.++. ++++.| .-| .+|+.++++. +|+|-+|
T Consensus 206 ~eea-~eA~~aGaD~I~ld~~-~~~~~k~av~~v~~---~ipi~A----sGGIt~eni~~~a~tGvD~IsVg 268 (286)
T 1x1o_A 206 LEEL-EEALEAGADLILLDNF-PLEALREAVRRVGG---RVPLEA----SGNMTLERAKAAAEAGVDYVSVG 268 (286)
T ss_dssp HHHH-HHHHHHTCSEEEEESC-CHHHHHHHHHHHTT---SSCEEE----ESSCCHHHHHHHHHHTCSEEECT
T ss_pred HHHH-HHHHHcCCCEEEECCC-CHHHHHHHHHHhCC---CCeEEE----EcCCCHHHHHHHHHcCCCEEEEc
Confidence 4555 5567889999999987 77888888777742 445444 122 5788888887 8999987
No 365
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=32.59 E-value=1.8e+02 Score=28.23 Aligned_cols=90 Identities=8% Similarity=0.028 Sum_probs=57.0
Q ss_pred HHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHh
Q 010443 224 VRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLES 303 (510)
Q Consensus 224 vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeS 303 (510)
+|+.|.+....+.+++.+.+++.++.+.. .-+|.+++..-|-. .+...++. .+.++...|+|+++=+.
T Consensus 30 ~k~~l~~G~~~~gl~~~~~~p~~~e~a~~--~GaD~v~lDlEh~~-----~~~~~~~~-~l~a~~~~~~~~~VRv~---- 97 (287)
T 2v5j_A 30 FKAALKAGRPQIGLWLGLSSSYSAELLAG--AGFDWLLIDGEHAP-----NNVQTVLT-QLQAIAPYPSQPVVRPS---- 97 (287)
T ss_dssp HHHHHHTTCCEEEEEECSCCHHHHHHHHT--SCCSEEEEESSSSS-----CCHHHHHH-HHHHHTTSSSEEEEECS----
T ss_pred HHHHHHCCCcEEEEEEECCCHHHHHHHHh--CCCCEEEEeCCCcc-----chHHHHHH-HHHHHHhcCCCEEEEEC----
Confidence 56666543236778999998887744321 12699999877742 12222222 34455667888887432
Q ss_pred hhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 304 MIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 304 M~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
.++. .|+..++..|+|+||+.-
T Consensus 98 -----~~d~---~di~~~ld~ga~~ImlP~ 119 (287)
T 2v5j_A 98 -----WNDP---VQIKQLLDVGTQTLLVPM 119 (287)
T ss_dssp -----SSCH---HHHHHHHHTTCCEEEESC
T ss_pred -----CCCH---HHHHHHHhCCCCEEEeCC
Confidence 2333 388888889999999963
No 366
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=32.57 E-value=2.9e+02 Score=26.87 Aligned_cols=95 Identities=17% Similarity=0.204 Sum_probs=56.2
Q ss_pred HHHHhh-cCeeEEeCCcc--cCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCC
Q 010443 251 DDILRE-TDSFMVARGDL--GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGT 326 (510)
Q Consensus 251 deI~~~-~DgI~IgrgDL--g~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~ 326 (510)
+-.++. .||+++. |-- +..+..++-..+-+.+++.++ -..|+++-|- ..+-+|..+.+. |-..|+
T Consensus 40 ~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGvg---------~~~t~~ai~la~~A~~~Ga 108 (301)
T 1xky_A 40 NYLIDNGTTAIVVG-GTTGESPTLTSEEKVALYRHVVSVVD-KRVPVIAGTG---------SNNTHASIDLTKKATEVGV 108 (301)
T ss_dssp HHHHHTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---------CSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCceEEeCCC---------CCCHHHHHHHHHHHHhcCC
Confidence 333443 7999885 221 123444554444455554443 2478876432 445566666655 566799
Q ss_pred ceEEeccCCCCCCCHHHHHHHHHHHHHHHh
Q 010443 327 DCVMLSGESAAGAYPEIAVKIMRRICIEAE 356 (510)
Q Consensus 327 D~imLs~Eta~G~yP~~~V~~m~~i~~~aE 356 (510)
|++|+..=--...-+.+.++..+.|+..+.
T Consensus 109 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 138 (301)
T 1xky_A 109 DAVMLVAPYYNKPSQEGMYQHFKAIAESTP 138 (301)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHTCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997544333345677788888877664
No 367
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=32.55 E-value=3.6e+02 Score=26.24 Aligned_cols=94 Identities=12% Similarity=0.031 Sum_probs=62.1
Q ss_pred CCChhcHHHHHhccCcCCCCEEEEcCC-------------CCHHHHH-HHHHHhccCCCCceEEEEecC------HHHHh
Q 010443 189 TLTEKDKEDILRWGVPNNIDMIALSFV-------------RKGSDLV-NVRKVLGPHAKNIQLMSKVEN------QEGVV 248 (510)
Q Consensus 189 ~lt~~D~~di~~~a~~~g~d~I~~sfV-------------~sa~dv~-~vr~~l~~~~~~~~IiakIEt------~~av~ 248 (510)
-++.+|.--- +.+-+.|+|.|.+..- =+.+++. .++... ..-+++.+++=+++ .++++
T Consensus 33 m~tayDa~sA-~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~-r~~~~~~vvaD~pfgsY~s~~~a~~ 110 (275)
T 3vav_A 33 MLTCYDASFA-ALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVA-RAQPRALIVADLPFGTYGTPADAFA 110 (275)
T ss_dssp EEECCSHHHH-HHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHH-HTCCSSEEEEECCTTSCSSHHHHHH
T ss_pred EEeCcCHHHH-HHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHH-hcCCCCCEEEecCCCCCCCHHHHHH
Confidence 3567777777 6777899999987621 1233333 344433 33356889999998 46778
Q ss_pred chHHHHhh-cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010443 249 NFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 296 (510)
Q Consensus 249 nldeI~~~-~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviv 296 (510)
|...+++. ++||-+--|. .+...+++..++|.|++-
T Consensus 111 ~a~rl~kaGa~aVklEdg~------------~~~~~i~~l~~~GIpv~g 147 (275)
T 3vav_A 111 SAVKLMRAGAQMVKFEGGE------------WLAETVRFLVERAVPVCA 147 (275)
T ss_dssp HHHHHHHTTCSEEEEECCG------------GGHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHcCCCEEEECCch------------hHHHHHHHHHHCCCCEEE
Confidence 88888875 6888886442 123455666789999974
No 368
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=32.47 E-value=36 Score=34.64 Aligned_cols=47 Identities=23% Similarity=0.355 Sum_probs=36.9
Q ss_pred EEecCCCCCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 010443 25 VCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAA 71 (510)
Q Consensus 25 i~TiGp~~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~ 71 (510)
.+.+|-.....+.++.++++|++++=++.+||..+...+.|+.+|+.
T Consensus 92 ~~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~ 138 (361)
T 3r2g_A 92 FVSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQL 138 (361)
T ss_dssp BEEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHh
Confidence 34455444567889999999999999999999887766777777774
No 369
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=32.41 E-value=57 Score=32.89 Aligned_cols=73 Identities=11% Similarity=-0.008 Sum_probs=42.3
Q ss_pred ccccccccCCCCCCCCCeEEEEecCCCCC--CHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEEE
Q 010443 5 DIEGLLRDVPNDKRLPKTKIVCTLGPASR--SVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVM 82 (510)
Q Consensus 5 ~~~~~~~~~p~~~~~~~tkIi~TiGp~~~--~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i~ 82 (510)
-+.++|+..+. .+...-.|+|-.+. -.+..+++.++|.+.+.+++.| +.++-.++++.+|++ .|.-+.|+
T Consensus 122 Pl~~llGg~~~----~~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a---~g~d~~l~ 193 (379)
T 2rdx_A 122 PVWMLLGGKLC----DGAPMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA-DWQSDIDRIRACLPL---LEPGEKAM 193 (379)
T ss_dssp BHHHHTTSCCC----SSEEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHGGG---SCTTCEEE
T ss_pred CHHHHcCCCCC----CceeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC-CHHHHHHHHHHHHHh---cCCCCEEE
Confidence 34456664322 24455677763211 1234566889999999999998 555555555555543 44334455
Q ss_pred ecC
Q 010443 83 LDT 85 (510)
Q Consensus 83 ~Dl 85 (510)
+|.
T Consensus 194 vDa 196 (379)
T 2rdx_A 194 ADA 196 (379)
T ss_dssp EEC
T ss_pred EEC
Confidence 554
No 370
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=32.33 E-value=64 Score=34.58 Aligned_cols=45 Identities=11% Similarity=0.172 Sum_probs=41.1
Q ss_pred HHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcE
Q 010443 35 VPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILC 79 (510)
Q Consensus 35 ~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v 79 (510)
.+.+++++++|++.+.|..-+.+..+..+..+.+++.+++++.|+
T Consensus 28 ~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~v~l 72 (540)
T 3nl6_A 28 YGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPL 72 (540)
T ss_dssp HHHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHhcCCEE
Confidence 589999999999999999999999999999999999999888664
No 371
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=32.31 E-value=63 Score=31.53 Aligned_cols=52 Identities=15% Similarity=0.163 Sum_probs=33.6
Q ss_pred CCHHHHHHHHHhCCCeEEEeecCC---------CH-HHHHHHHHHHHHHHHhcCCcEEEEecCC
Q 010443 33 RSVPMLEKLLRAGMNVARFNFSHG---------TH-EYQQETLNNLRAAMHNTQILCAVMLDTK 86 (510)
Q Consensus 33 ~~~~~l~~li~~G~~~~RiN~sh~---------~~-~~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 86 (510)
.+.+.++.|-+.|+|++||-++.. .. +...+.++.+=+.+.+.| +.+++|+-
T Consensus 29 ~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~G--i~vildlh 90 (343)
T 1ceo_A 29 ITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYN--LGLVLDMH 90 (343)
T ss_dssp SCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred cCHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCC--CEEEEEec
Confidence 357889999999999999987632 11 223344444444455666 45677764
No 372
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=32.29 E-value=1.7e+02 Score=27.06 Aligned_cols=97 Identities=11% Similarity=0.182 Sum_probs=52.8
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEe------c-CHHHHhchHHHHhhcCeeEEeCCcccCCCC
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV------E-NQEGVVNFDDILRETDSFMVARGDLGMEIP 272 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakI------E-t~~av~nldeI~~~~DgI~IgrgDLg~e~~ 272 (510)
+.+.+.|++.++.+ -.+.++...+.++..+.. ++....-+ + +.+.++.+++.+.....-.+|=|..|.+..
T Consensus 26 ~~~~~~Gv~~~v~~-~~~~~~~~~~~~l~~~~~-~~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~~~iGEiGld~~ 103 (259)
T 1zzm_A 26 QRAAQAGVGKIIVP-ATEAENFARVLALAENYQ-PLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLF 103 (259)
T ss_dssp HHHHHTTEEEEEEE-CCSGGGHHHHHHHHHHCT-TEEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSSEEEEEEEEEECC
T ss_pred HHHHHcCCCEEEEe-cCCHHHHHHHHHHHHhCC-CeEEEEEecccccccCCHHHHHHHHHHHhcCCCCEEEEEEeccCCC
Confidence 66778899987665 234677777766654432 22211111 1 224455555555431112234466666643
Q ss_pred ch-hHHHHH----HHHHHHHHHcCCCeEEeh
Q 010443 273 VE-KIFLAQ----KMMIYKCNLVGKPVVTAT 298 (510)
Q Consensus 273 ~~-~v~~~q----k~ii~~~~~~gkpvivaT 298 (510)
.. .-...| +..++.|.+.|+|+++-|
T Consensus 104 ~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~ 134 (259)
T 1zzm_A 104 GDDPQFERQQWLLDEQLKLAKRYDLPVILHS 134 (259)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 21 112334 456777999999999865
No 373
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=32.28 E-value=1.2e+02 Score=31.68 Aligned_cols=87 Identities=13% Similarity=0.170 Sum_probs=49.2
Q ss_pred Cce-EEEEecCHHHHhchHHHHhh-----cCeeEEeCC-----cc---cCCCC-ch--hHHHHHHHHHHHHHH-c--CCC
Q 010443 234 NIQ-LMSKVENQEGVVNFDDILRE-----TDSFMVARG-----DL---GMEIP-VE--KIFLAQKMMIYKCNL-V--GKP 293 (510)
Q Consensus 234 ~~~-IiakIEt~~av~nldeI~~~-----~DgI~Igrg-----DL---g~e~~-~~--~v~~~qk~ii~~~~~-~--gkp 293 (510)
+.. |+.||=--...+++.+|++. +|||.+.-+ |+ +.+.+ +. .+....-+++...++ . ..|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 456 89999422112255555554 599987743 21 11111 11 112222344444444 4 789
Q ss_pred eEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 294 VVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 294 vivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
+|....+. ...|+..++..|||+|++.
T Consensus 376 VIg~GGI~------------s~~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 376 IIASGGIF------------SGLDALEKIEAGASVCQLY 402 (443)
T ss_dssp EEEESSCC------------SHHHHHHHHHTTEEEEEES
T ss_pred EEEECCCC------------CHHHHHHHHHcCCCEEEEc
Confidence 98765533 3457788889999999996
No 374
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=32.15 E-value=2.6e+02 Score=27.65 Aligned_cols=95 Identities=17% Similarity=0.070 Sum_probs=56.3
Q ss_pred HHHhh-cCeeEEeCCcc--cCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCc
Q 010443 252 DILRE-TDSFMVARGDL--GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTD 327 (510)
Q Consensus 252 eI~~~-~DgI~IgrgDL--g~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D 327 (510)
-.++. +|||++. |-- +..+..++-..+-+.+++.++ -..|||+-|- ..+-+|..+.+. |-..|+|
T Consensus 63 ~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGvg---------~~st~eai~la~~A~~~Gad 131 (332)
T 2r8w_A 63 RLDAAEVDSVGIL-GSTGIYMYLTREERRRAIEAAATILR-GRRTLMAGIG---------ALRTDEAVALAKDAEAAGAD 131 (332)
T ss_dssp HHHHHTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEEC---------CSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC---------CCCHHHHHHHHHHHHhcCCC
Confidence 33443 7999885 221 123444554444455544443 2478776432 445566766665 5667999
Q ss_pred eEEeccCCCCCCCHHHHHHHHHHHHHHHhc
Q 010443 328 CVMLSGESAAGAYPEIAVKIMRRICIEAES 357 (510)
Q Consensus 328 ~imLs~Eta~G~yP~~~V~~m~~i~~~aE~ 357 (510)
++|+..=--...-+.+.++..+.|+..+.-
T Consensus 132 avlv~~P~Y~~~s~~~l~~~f~~VA~a~~l 161 (332)
T 2r8w_A 132 ALLLAPVSYTPLTQEEAYHHFAAVAGATAL 161 (332)
T ss_dssp EEEECCCCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 999975433333456778888888877653
No 375
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=32.06 E-value=74 Score=30.82 Aligned_cols=53 Identities=6% Similarity=0.125 Sum_probs=35.0
Q ss_pred CCHHHHHHHHHhCCCeEEEeecC---------CCH-HHHHHHHHHHHHHHHhcCCcEEEEecCCC
Q 010443 33 RSVPMLEKLLRAGMNVARFNFSH---------GTH-EYQQETLNNLRAAMHNTQILCAVMLDTKG 87 (510)
Q Consensus 33 ~~~~~l~~li~~G~~~~RiN~sh---------~~~-~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 87 (510)
.+.+.++.|-+.|+|++|+-++. +.. +...+.++.+=+.+.+.| +.+++|+-+
T Consensus 42 ~~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G--i~vildlh~ 104 (320)
T 3nco_A 42 IEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKND--LVVIINCHH 104 (320)
T ss_dssp CCHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTT--CEEEEECCC
T ss_pred CCHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEEcCC
Confidence 35899999999999999998753 221 222344444444455666 457788875
No 376
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=32.02 E-value=1.4e+02 Score=28.98 Aligned_cols=100 Identities=11% Similarity=-0.013 Sum_probs=53.1
Q ss_pred CChhcHHHHHhccCcCCCCEEEEcCCC-------------------------C----HHHHHHHHHHhccCCCCceEEEE
Q 010443 190 LTEKDKEDILRWGVPNNIDMIALSFVR-------------------------K----GSDLVNVRKVLGPHAKNIQLMSK 240 (510)
Q Consensus 190 lt~~D~~di~~~a~~~g~d~I~~sfV~-------------------------s----a~dv~~vr~~l~~~~~~~~Iiak 240 (510)
++..+...+.+.+.+.|+|+|.++--. . +..+..++++-+..+.++.||+-
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~ 248 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGT 248 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEE
Confidence 355555554467788999999886421 0 11234444443333335666653
Q ss_pred --ecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCC
Q 010443 241 --VENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKP 293 (510)
Q Consensus 241 --IEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkp 293 (510)
|.|.+-+.. -|..-+|++++||+=|. -+..-+..+.+.+-....+.|..
T Consensus 249 GGI~~~~da~~--~l~~GAd~V~vg~~~l~--~~p~~~~~i~~~l~~~l~~~g~~ 299 (311)
T 1jub_A 249 GGIETGQDAFE--HLLCGATMLQIGTALHK--EGPAIFDRIIKELEEIMNQKGYQ 299 (311)
T ss_dssp SSCCSHHHHHH--HHHHTCSEEEECHHHHH--HCTHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHH--HHHcCCCEEEEchHHHh--cCcHHHHHHHHHHHHHHHHcCCC
Confidence 455433322 12233899999997653 11223344445555555555543
No 377
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=31.89 E-value=74 Score=29.88 Aligned_cols=81 Identities=12% Similarity=0.082 Sum_probs=53.0
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHH-hhcCeeEEeCCcccCCCCchhHHH
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDIL-RETDSFMVARGDLGMEIPVEKIFL 278 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~-~~~DgI~IgrgDLg~e~~~~~v~~ 278 (510)
+.+.+.|+|++.+|= ..++++..+|+.+.. -+.+..=|=- ++ .+..+.+ .-+|.++|||+=+..+=|.+....
T Consensus 129 ~~a~~~g~~GvV~sa-t~p~e~~~ir~~~~~---~~~vtPGI~~-~g-~tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~~ 202 (222)
T 4dbe_A 129 NVIREISPKGIVVGG-TKLDHITQYRRDFEK---MTIVSPGMGS-QG-GSYGDAVCAGADYEIIGRSIYNAGNPLTALRT 202 (222)
T ss_dssp HHHHHHCCSEEEECT-TCHHHHHHHHHHCTT---CEEEECCBST-TS-BCTTHHHHHTCSEEEECHHHHTSSSHHHHHHH
T ss_pred HHHHHhCCCEEEECC-CCHHHHHHHHHhCCC---CEEEcCCccc-Cc-cCHHHHHHcCCCEEEECHHhcCCCCHHHHHHH
Confidence 667788999998773 347889999987742 1223333421 21 1454444 458999999999998888766666
Q ss_pred HHHHHHHH
Q 010443 279 AQKMMIYK 286 (510)
Q Consensus 279 ~qk~ii~~ 286 (510)
+++.+-+.
T Consensus 203 i~~~i~~~ 210 (222)
T 4dbe_A 203 INKIIEDK 210 (222)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66555443
No 378
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=31.88 E-value=31 Score=35.39 Aligned_cols=85 Identities=15% Similarity=0.194 Sum_probs=56.9
Q ss_pred hcHHHHHhccCcC-CCCEEEEcC-------CCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeC
Q 010443 193 KDKEDILRWGVPN-NIDMIALSF-------VRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVAR 264 (510)
Q Consensus 193 ~D~~di~~~a~~~-g~d~I~~sf-------V~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~Igr 264 (510)
.|...| +.+.+. |+++|-++- +-+.+++.++++.+.+.|-. ++-+|+ +.--++|.. +.
T Consensus 31 ~d~~~L-~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~---i~~i~s---~~~~~~i~~-------~~ 96 (386)
T 3bdk_A 31 KDPVTL-EEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLE---ITVIES---IPVHEDIKQ-------GK 96 (386)
T ss_dssp TCSSCH-HHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCE---EEEEEC---CCCCHHHHT-------TC
T ss_pred CCHHHH-HHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCE---EEEEec---ccccccccc-------Cc
Confidence 444456 667789 999998762 55779999999999887633 233454 111122221 11
Q ss_pred CcccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 265 GDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 265 gDLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
. ..++....-++.++.|.+.|.++++.
T Consensus 97 ~------~r~~~ie~~k~~i~~aa~lGi~~v~~ 123 (386)
T 3bdk_A 97 P------NRDALIENYKTSIRNVGAAGIPVVCY 123 (386)
T ss_dssp T------THHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred H------HHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 1 14566677889999999999999874
No 379
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=31.65 E-value=1.5e+02 Score=29.96 Aligned_cols=72 Identities=13% Similarity=0.144 Sum_probs=44.2
Q ss_pred ccccccccCCCCCCCCC-eEEEEec-CCCCCCHHH----HHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCc
Q 010443 5 DIEGLLRDVPNDKRLPK-TKIVCTL-GPASRSVPM----LEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQIL 78 (510)
Q Consensus 5 ~~~~~~~~~p~~~~~~~-tkIi~Ti-Gp~~~~~~~----l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~ 78 (510)
-+.++|+... ..+ ...-+|+ |- ..+++. .+++.+.|.+.+.+++.+ +.++-.++++.+|++. |.-
T Consensus 125 Pl~~LLGg~~----r~~~v~~y~~~~~~-~~~~e~~~~~a~~~~~~G~~~iKiKvG~-~~~~d~~~v~avR~a~---g~d 195 (389)
T 3ozy_A 125 PIYQLLGGKF----HTRGVRAYASSIYW-DLTPDQAADELAGWVEQGFTAAKLKVGR-APRKDAANLRAMRQRV---GAD 195 (389)
T ss_dssp BHHHHTTSCS----STTCEEEEEEEECS-SCCHHHHHHHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHHH---CTT
T ss_pred CHHHHhCCcc----cCCceeeEEecCCC-CCCHHHHHHHHHHHHHCCCCEEeeccCC-CHHHHHHHHHHHHHHc---CCC
Confidence 3445666321 124 6677777 52 223443 456778899999999987 5666666777777654 333
Q ss_pred EEEEecC
Q 010443 79 CAVMLDT 85 (510)
Q Consensus 79 v~i~~Dl 85 (510)
+.|++|.
T Consensus 196 ~~l~vDa 202 (389)
T 3ozy_A 196 VEILVDA 202 (389)
T ss_dssp SEEEEEC
T ss_pred ceEEEEC
Confidence 4555554
No 380
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=31.61 E-value=20 Score=35.39 Aligned_cols=64 Identities=20% Similarity=0.228 Sum_probs=45.3
Q ss_pred HHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHH--hchHHHHhh-cCeeEEeC
Q 010443 195 KEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGV--VNFDDILRE-TDSFMVAR 264 (510)
Q Consensus 195 ~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av--~nldeI~~~-~DgI~Igr 264 (510)
.+.+ +-+++.|+|+|.+... +.++++++.+.+...+.+++ ||---|+ +|+.++++. +|+|-+|.
T Consensus 203 leea-~eA~~aGaD~I~LDn~-~~e~l~~av~~l~~~~~~v~----ieASGGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 203 LEDA-LRAVEAGADIVMLDNL-SPEEVKDISRRIKDINPNVI----VEVSGGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp HHHH-HHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSE----EEEEECCCTTTGGGGCCTTCCEEEEGG
T ss_pred HHHH-HHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCce----EEEECCCCHHHHHHHHHcCCCEEEEeH
Confidence 3455 4567889999999985 88999998888864333443 3333333 677887777 79999985
No 381
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=31.59 E-value=1.2e+02 Score=30.19 Aligned_cols=66 Identities=8% Similarity=-0.038 Sum_probs=48.8
Q ss_pred HHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 220 DLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 220 dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
-++.+++.+.+.|..+.+-+.-+.... +.+++++-.|.|+.+-.+ ...+..+-+.|+++++|.+.+
T Consensus 91 Ka~~~~~~l~~lnp~v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d~----------~~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 91 RAEASLERAQNLNPMVDVKVDTEDIEK--KPESFFTQFDAVCLTCCS----------RDVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp HHHHHHHHHHHTCTTSEEEEECSCGGG--CCHHHHTTCSEEEEESCC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhHCCCeEEEEEecccCc--chHHHhcCCCEEEEcCCC----------HHHHHHHHHHHHHcCCCEEEE
Confidence 455666777777888887776665443 567888888988877432 356778999999999999864
No 382
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=31.51 E-value=2.6e+02 Score=27.90 Aligned_cols=94 Identities=13% Similarity=0.174 Sum_probs=56.7
Q ss_pred HHHhh-cCeeEEeCCcc--cCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCc
Q 010443 252 DILRE-TDSFMVARGDL--GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTD 327 (510)
Q Consensus 252 eI~~~-~DgI~IgrgDL--g~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D 327 (510)
-.++. .|||++. |-- +..+..++-..+-+.+++.++ -..|||+-| ...+-+|..+.+. |-..|+|
T Consensus 60 ~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGv---------g~~st~eai~la~~A~~~Gad 128 (343)
T 2v9d_A 60 DLIKAGVDGLFFL-GSGGEFSQLGAEERKAIARFAIDHVD-RRVPVLIGT---------GGTNARETIELSQHAQQAGAD 128 (343)
T ss_dssp HHHHTTCSCEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CSSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHcCCCEEEeC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCCCHHHHHHHHHHHHhcCCC
Confidence 33443 7999885 221 123444554455555554443 247887643 2456677766666 5667999
Q ss_pred eEEeccCCCCCCCHHHHHHHHHHHHHHHh
Q 010443 328 CVMLSGESAAGAYPEIAVKIMRRICIEAE 356 (510)
Q Consensus 328 ~imLs~Eta~G~yP~~~V~~m~~i~~~aE 356 (510)
++|+..=--...-+.+.++..+.|+..++
T Consensus 129 avlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 157 (343)
T 2v9d_A 129 GIVVINPYYWKVSEANLIRYFEQVADSVT 157 (343)
T ss_dssp EEEEECCSSSCCCHHHHHHHHHHHHHTCS
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 99997543333345677888888877665
No 383
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=31.40 E-value=94 Score=29.72 Aligned_cols=128 Identities=11% Similarity=0.012 Sum_probs=69.0
Q ss_pred HHHhccCcCCCCEEEEcCC-CCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHh-hcCeeEEeCCcccC-CCCc
Q 010443 197 DILRWGVPNNIDMIALSFV-RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR-ETDSFMVARGDLGM-EIPV 273 (510)
Q Consensus 197 di~~~a~~~g~d~I~~sfV-~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~-~~DgI~IgrgDLg~-e~~~ 273 (510)
.+ ..+.+.|+|+|.+.-. -+ ++++++-+...+.| +..++-+.+.+-++ ..++ -+|.|-++.-+|.. ..++
T Consensus 120 qi-~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lG--l~~lvev~~~~E~~---~a~~~gad~IGvn~~~l~~~~~dl 192 (254)
T 1vc4_A 120 ML-EEARAFGASAALLIVALLG-ELTGAYLEEARRLG--LEALVEVHTERELE---IALEAGAEVLGINNRDLATLHINL 192 (254)
T ss_dssp HH-HHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHT--CEEEEEECSHHHHH---HHHHHTCSEEEEESBCTTTCCBCT
T ss_pred HH-HHHHHcCCCEEEECccchH-HHHHHHHHHHHHCC--CeEEEEECCHHHHH---HHHHcCCCEEEEccccCcCCCCCH
Confidence 44 4567889999987422 11 44444444333433 33334444443332 2222 25888777666542 1122
Q ss_pred hhHHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHH
Q 010443 274 EKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIM 348 (510)
Q Consensus 274 ~~v~~~qk~ii~~~~~~--gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m 348 (510)
+... ++....... +.|++.. ...-|.+ |+..... |+|+++...---.+..|.++++-+
T Consensus 193 ~~~~----~L~~~i~~~~~~~~vIAe---------gGI~s~~---dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l 252 (254)
T 1vc4_A 193 ETAP----RLGRLARKRGFGGVLVAE---------SGYSRKE---ELKALEG-LFDAVLIGTSLMRAPDLEAALREL 252 (254)
T ss_dssp THHH----HHHHHHHHTTCCSEEEEE---------SCCCSHH---HHHTTTT-TCSEEEECHHHHTSSCHHHHHHHH
T ss_pred HHHH----HHHHhCccccCCCeEEEE---------cCCCCHH---HHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHH
Confidence 2222 333333333 5676642 3344444 5566666 999999976666677888877654
No 384
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=31.30 E-value=2.2e+02 Score=27.91 Aligned_cols=119 Identities=11% Similarity=0.047 Sum_probs=67.8
Q ss_pred HHHHhccCcCCCCEEEEcCCCC--HHHHHHHHHHhccCCCCceEEEE--e-cCHHHHhchHHHHhh-cCeeEEeCCcccC
Q 010443 196 EDILRWGVPNNIDMIALSFVRK--GSDLVNVRKVLGPHAKNIQLMSK--V-ENQEGVVNFDDILRE-TDSFMVARGDLGM 269 (510)
Q Consensus 196 ~di~~~a~~~g~d~I~~sfV~s--a~dv~~vr~~l~~~~~~~~Iiak--I-Et~~av~nldeI~~~-~DgI~IgrgDLg~ 269 (510)
+|| +.+.++|+|+|.+-+.+. .-|+..++++++..+. ..+.-. + +.++..+.++.+++. .|.|+-+-+.-++
T Consensus 115 ~dI-~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~-l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~a 192 (287)
T 3iwp_A 115 ADI-RLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRP-LPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSSA 192 (287)
T ss_dssp HHH-HHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTT-SCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSST
T ss_pred HHH-HHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCC-CcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCCh
Confidence 467 677899999999998543 3577788887765432 111100 0 112244567777774 7999988775555
Q ss_pred CCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHH-cCCceEEeccC
Q 010443 270 EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVL-DGTDCVMLSGE 334 (510)
Q Consensus 270 e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~-~G~D~imLs~E 334 (510)
.-+++.+..++ +. ..|+..|++.-=+ .+.. + ...+. -|++.+.+|+-
T Consensus 193 ~~Gl~~Lk~Lv----~~--a~~rI~ImaGGGV-------~~~N--i---~~l~~~tG~~~~H~S~~ 240 (287)
T 3iwp_A 193 LEGLPLIKRLI----EQ--AKGRIVVMPGGGI-------TDRN--L---QRILEGSGATEFHCSAR 240 (287)
T ss_dssp TTTHHHHHHHH----HH--HTTSSEEEECTTC-------CTTT--H---HHHHHHHCCSEEEECCE
T ss_pred HHhHHHHHHHH----HH--hCCCCEEEECCCc-------CHHH--H---HHHHHhhCCCEEeECcC
Confidence 44444433332 22 2344446543211 2333 2 33333 69999999864
No 385
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=31.16 E-value=1.4e+02 Score=30.32 Aligned_cols=75 Identities=20% Similarity=0.146 Sum_probs=45.0
Q ss_pred cccccccccCCCCCCCCCeEEEEecCC---CCCCHH--------HHHHHHHhCCCeEEE-eecC--CCHHHHHHHHHHHH
Q 010443 4 IDIEGLLRDVPNDKRLPKTKIVCTLGP---ASRSVP--------MLEKLLRAGMNVARF-NFSH--GTHEYQQETLNNLR 69 (510)
Q Consensus 4 ~~~~~~~~~~p~~~~~~~tkIi~TiGp---~~~~~~--------~l~~li~~G~~~~Ri-N~sh--~~~~~~~~~i~~ir 69 (510)
.-+.++|+...+ .+....+|+|+ .+.+++ ..+++.+.|.+.+.+ -+.. .+.++-.+.++.+|
T Consensus 124 ~Pv~~LLGG~~r----~~v~~y~s~~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR 199 (394)
T 3mkc_A 124 VPAYQLLGGTNK----DKVHPYLTLYPAIPVDASLDVAIKGYAPLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELR 199 (394)
T ss_dssp CBHHHHTTCCSC----SEECCEEECCCSCC-CCCHHHHHHHHHHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHH
T ss_pred CcHHHHcCCCcC----CeeEEEEecCCcCCCCcchhhhHHHHHHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHH
Confidence 345567774322 23445678885 233322 566788999999999 4543 45666666777777
Q ss_pred HHHHhcCCcEEEEecC
Q 010443 70 AAMHNTQILCAVMLDT 85 (510)
Q Consensus 70 ~~~~~~~~~v~i~~Dl 85 (510)
++. |.-+.|++|.
T Consensus 200 ~a~---G~d~~l~vDa 212 (394)
T 3mkc_A 200 GIL---GHDTDMMVDY 212 (394)
T ss_dssp HHH---CSSSEEEEEC
T ss_pred HHh---CCCCeEEEeC
Confidence 654 4334555554
No 386
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=31.15 E-value=2e+02 Score=27.84 Aligned_cols=95 Identities=14% Similarity=0.064 Sum_probs=55.8
Q ss_pred HHHHhh-cCeeEEeCCcc--cCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCC
Q 010443 251 DDILRE-TDSFMVARGDL--GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGT 326 (510)
Q Consensus 251 deI~~~-~DgI~IgrgDL--g~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~ 326 (510)
+-.++. .||+++. |-- +..+..++-..+-+..++.++. ..|++.-| ...+-+|..+.+. |-..|+
T Consensus 29 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~~a~~~Ga 97 (292)
T 2ojp_A 29 DYHVASGTSAIVSV-GTTGESATLNHDEHADVVMMTLDLADG-RIPVIAGT---------GANATAEAISLTQRFNDSGI 97 (292)
T ss_dssp HHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHTTTSSC
T ss_pred HHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCccHHHHHHHHHHHHhcCC
Confidence 333443 7999885 221 1234445544455555544432 47887643 2445567766666 555699
Q ss_pred ceEEeccCCCCCCCHHHHHHHHHHHHHHHh
Q 010443 327 DCVMLSGESAAGAYPEIAVKIMRRICIEAE 356 (510)
Q Consensus 327 D~imLs~Eta~G~yP~~~V~~m~~i~~~aE 356 (510)
|++|+..=--...-+.+.++..+.|+..+.
T Consensus 98 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 127 (292)
T 2ojp_A 98 VGCLTVTPYYNRPSQEGLYQHFKAIAEHTD 127 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997543333335667778788776554
No 387
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=31.11 E-value=52 Score=31.60 Aligned_cols=52 Identities=12% Similarity=0.254 Sum_probs=33.7
Q ss_pred CHHHHHHHHHhCCCeEEEeecCCC--HHHHHHHHHHHHHHHHhcCCcEEEEecCCC
Q 010443 34 SVPMLEKLLRAGMNVARFNFSHGT--HEYQQETLNNLRAAMHNTQILCAVMLDTKG 87 (510)
Q Consensus 34 ~~~~l~~li~~G~~~~RiN~sh~~--~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 87 (510)
..+.++.|-+.|+|++|+-++.+. .+...+.++.+=+.+.+.| +.+++|+-+
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~G--i~Vild~H~ 86 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNK--MVAVVEVHD 86 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTT--CEEEEEECT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCC--CEEEEEecc
Confidence 457899999999999999887431 1112334444445555666 456778764
No 388
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=31.04 E-value=2.6e+02 Score=27.28 Aligned_cols=87 Identities=16% Similarity=0.160 Sum_probs=53.8
Q ss_pred cCeeEEeCCccc--CCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEecc
Q 010443 257 TDSFMVARGDLG--MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 333 (510)
Q Consensus 257 ~DgI~IgrgDLg--~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~ 333 (510)
+||+++. |=-| ..+..++-..+.+.+++.+ -..|||+-| ...+-+|..+.+. |-..|+|++|+..
T Consensus 43 v~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~--grvpViaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~ 110 (313)
T 3dz1_A 43 CEGVTVL-GILGEAPKLDAAEAEAVATRFIKRA--KSMQVIVGV---------SAPGFAAMRRLARLSMDAGAAGVMIAP 110 (313)
T ss_dssp CSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHC--TTSEEEEEC---------CCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHc--CCCcEEEec---------CCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 7999885 2221 2344444444444444444 357877643 2456667766665 6667999999963
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh
Q 010443 334 ESAAGAYPEIAVKIMRRICIEAE 356 (510)
Q Consensus 334 Eta~G~yP~~~V~~m~~i~~~aE 356 (510)
=- .-.-+.+.++..+.|+..+.
T Consensus 111 P~-~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 111 PP-SLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp CT-TCCSHHHHHHHHHHHHHHHC
T ss_pred CC-CCCCHHHHHHHHHHHHHhCC
Confidence 32 11234677888999998887
No 389
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=31.00 E-value=59 Score=31.53 Aligned_cols=54 Identities=19% Similarity=0.126 Sum_probs=37.3
Q ss_pred CCCHHHHHHHH-HhCCCeEEEeecCCC-----HHHHHHHHHHHHHHHHhcCCcEEEEecCCC
Q 010443 32 SRSVPMLEKLL-RAGMNVARFNFSHGT-----HEYQQETLNNLRAAMHNTQILCAVMLDTKG 87 (510)
Q Consensus 32 ~~~~~~l~~li-~~G~~~~RiN~sh~~-----~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 87 (510)
..+.+.++.|. +.|+|++|+-+.+.. .++..+.++.+=+.+.+.|. .+++|+-+
T Consensus 43 ~~~~~~~~~l~~~~G~N~VRip~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi--~Vild~H~ 102 (303)
T 7a3h_A 43 FVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVKEKVKEAVEAAIDLDI--YVIIDWHI 102 (303)
T ss_dssp GCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTTHHHHHHHHHHHHHHHTC--EEEEEEEC
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEEeCCCCccCCHHHHHHHHHHHHHHHHCCC--EEEEEecc
Confidence 45688899998 679999999886531 12245566666666777774 56777764
No 390
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=30.92 E-value=90 Score=31.23 Aligned_cols=54 Identities=15% Similarity=0.136 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHhCCCeEEEeecCC---C------H-HHHHHHHHHHHHHHHhcCCcEEEEecCCCC
Q 010443 33 RSVPMLEKLLRAGMNVARFNFSHG---T------H-EYQQETLNNLRAAMHNTQILCAVMLDTKGP 88 (510)
Q Consensus 33 ~~~~~l~~li~~G~~~~RiN~sh~---~------~-~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 88 (510)
...+.++.|-+.|+|++||-++.. . . +...+.++.+=+.+.+.| +.+++|+-..
T Consensus 70 ~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~G--i~vild~h~~ 133 (395)
T 2jep_A 70 VTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEG--LYVIINIHGD 133 (395)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEECCCGG
T ss_pred CcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEECCCc
Confidence 368899999999999999988642 1 1 123334444444455555 5678888753
No 391
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=30.90 E-value=1.4e+02 Score=26.93 Aligned_cols=60 Identities=17% Similarity=0.299 Sum_probs=39.8
Q ss_pred EecCCCEEEEEec----CCCCCCccEEecCCCCccc--cCCCCCEEEEe--CCe-EEEEEEEEeCCCCeEE
Q 010443 102 QLKEGQEITVSTD----YDFKGNEEMITMSYKKLPV--DVKPGNTILCA--DGT-ITLTVLSCDPKSGTVR 163 (510)
Q Consensus 102 ~l~~G~~v~l~~~----~~~~~~~~~i~v~~~~~~~--~v~~gd~i~id--DG~-i~l~V~~~~~~~~~i~ 163 (510)
..+.|++.+|+.. |..........++-..|.. .+++|..+.+. ||. +...|++++ ++.++
T Consensus 74 gm~~Ge~~~v~Ipp~~AYG~~~~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~--~~~V~ 142 (169)
T 4dt4_A 74 GLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREIN--GDSIT 142 (169)
T ss_dssp TCCTTCEEEEEECGGGTTCCCCGGGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEEE--TTEEE
T ss_pred CCCCCCEEEEEEChHHhcCCCChHHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEEc--CCEEE
Confidence 4678999988865 2223334455566555553 48999999986 454 678899985 44443
No 392
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=30.89 E-value=69 Score=30.82 Aligned_cols=52 Identities=10% Similarity=0.146 Sum_probs=33.5
Q ss_pred CHHHHHHHHHhCCCeEEEeecCC---------CH-HHHHHHHHHHHHHHHhcCCcEEEEecCCC
Q 010443 34 SVPMLEKLLRAGMNVARFNFSHG---------TH-EYQQETLNNLRAAMHNTQILCAVMLDTKG 87 (510)
Q Consensus 34 ~~~~l~~li~~G~~~~RiN~sh~---------~~-~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 87 (510)
+.+.++.|-+.|+|++|+-++.. .. +...+.++.+=+.+++.| +.+++|+-+
T Consensus 35 ~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G--i~vild~h~ 96 (317)
T 3aof_A 35 KDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRG--LAVVINIHH 96 (317)
T ss_dssp CTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHTT--CEEEEECCC
T ss_pred CHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHCC--CEEEEEecC
Confidence 57899999999999999987631 11 222334444444455566 456778763
No 393
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=30.59 E-value=92 Score=24.43 Aligned_cols=70 Identities=20% Similarity=0.273 Sum_probs=37.6
Q ss_pred CcEEecCCCEEEEEecCCCCCCccEEe-cCCCCccccCCCCC-EEEEeCCeEEEEEEEEeC-CCCeEEEEEeeC
Q 010443 99 KPIQLKEGQEITVSTDYDFKGNEEMIT-MSYKKLPVDVKPGN-TILCADGTITLTVLSCDP-KSGTVRCRCENT 169 (510)
Q Consensus 99 ~~i~l~~G~~v~l~~~~~~~~~~~~i~-v~~~~~~~~v~~gd-~i~idDG~i~l~V~~~~~-~~~~i~~~v~~~ 169 (510)
..+.+.+|+.++|.....-....+..+ -|-..+... ..+. .+.-+++.-.|.+..+.. +....+|.+.|.
T Consensus 13 ~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~ 85 (100)
T 3knb_A 13 SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQ-EQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNE 85 (100)
T ss_dssp SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTT-GGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeee-ccceeeeecccceEEEEEcCCCccCCEEEEEEEEEC
Confidence 458899999999986521011112222 332222111 1111 234456666787766543 345789999876
No 394
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=30.49 E-value=1.8e+02 Score=26.82 Aligned_cols=37 Identities=5% Similarity=-0.008 Sum_probs=28.9
Q ss_pred hccCcCCCCEEEEcCC---------------CCHHHHHHHHHHhccCCCCce
Q 010443 200 RWGVPNNIDMIALSFV---------------RKGSDLVNVRKVLGPHAKNIQ 236 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV---------------~sa~dv~~vr~~l~~~~~~~~ 236 (510)
+.+.+.|+|+|=+... -+.+++.++++.+++.|-.+.
T Consensus 29 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 80 (262)
T 3p6l_A 29 DKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIV 80 (262)
T ss_dssp HHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEE
Confidence 7788999999988642 457889999999988764433
No 395
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=30.49 E-value=81 Score=31.94 Aligned_cols=73 Identities=11% Similarity=0.147 Sum_probs=47.1
Q ss_pred ccccccccCCCCCCCCCeEEEEecCCCCC-CHH----HHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcE
Q 010443 5 DIEGLLRDVPNDKRLPKTKIVCTLGPASR-SVP----MLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILC 79 (510)
Q Consensus 5 ~~~~~~~~~p~~~~~~~tkIi~TiGp~~~-~~~----~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v 79 (510)
-+.++|+.. ..+....+|+|-... +++ ..+++.++|.+.+.+.+.|++.++-.++++.+|++. |.-+
T Consensus 137 Pl~~llGg~-----~~~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~av---g~d~ 208 (393)
T 2og9_A 137 SLAKLLGSY-----RDSVRCYNTSGGFLHTPIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHL---GDAV 208 (393)
T ss_dssp BHHHHHCCS-----CSEEEEEBCTTCCTTSCHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHH---CTTS
T ss_pred cHHHHhCCC-----CCceEEEEECCCcCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHc---CCCC
Confidence 344566532 134556666643312 454 456678899999999999988887778888888765 3234
Q ss_pred EEEecC
Q 010443 80 AVMLDT 85 (510)
Q Consensus 80 ~i~~Dl 85 (510)
.|++|.
T Consensus 209 ~l~vDa 214 (393)
T 2og9_A 209 PLMVDA 214 (393)
T ss_dssp CEEEEC
T ss_pred EEEEEC
Confidence 455554
No 396
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=30.44 E-value=2.7e+02 Score=25.46 Aligned_cols=34 Identities=15% Similarity=0.208 Sum_probs=24.5
Q ss_pred hccCcCCCCEEEEc-CCC-----CHHHHHHHHHHhccCCC
Q 010443 200 RWGVPNNIDMIALS-FVR-----KGSDLVNVRKVLGPHAK 233 (510)
Q Consensus 200 ~~a~~~g~d~I~~s-fV~-----sa~dv~~vr~~l~~~~~ 233 (510)
+.+.+.|+++|=+. .-. +..++.++++.+.+.|-
T Consensus 21 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl 60 (278)
T 1i60_A 21 ELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHI 60 (278)
T ss_dssp HHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSC
T ss_pred HHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCC
Confidence 67788999999988 321 23567778888877653
No 397
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=30.43 E-value=68 Score=30.15 Aligned_cols=105 Identities=12% Similarity=0.116 Sum_probs=56.8
Q ss_pred cHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEe------c-------CHHHHhchHHHHhhcCee
Q 010443 194 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV------E-------NQEGVVNFDDILRETDSF 260 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakI------E-------t~~av~nldeI~~~~DgI 260 (510)
|.+.+.+.+.+.|++.++.+- .+.++...+.++.+..+..+...+-| . +.+.++.+.+.+.....-
T Consensus 21 ~~~~~l~~~~~~Gv~~~v~~~-~~~~~~~~~~~l~~~~~~~i~~~~GihP~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 99 (272)
T 2y1h_A 21 DLDDVLEKAKKANVVALVAVA-EHSGEFEKIMQLSERYNGFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDR 99 (272)
T ss_dssp THHHHHHHHHHTTEEEEEECC-SSGGGHHHHHHHHHHTTTTEEEEECCCSBC-------CBCCHHHHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHHCCCCEEEEeC-CCHHHHHHHHHHHHHCCCCEEEEEEECCCccccccccccCCHHHHHHHHHHHHhCCCC
Confidence 444544667789999877763 34666666666554432111111111 1 224455555545422111
Q ss_pred EEeCCcccCCCC--c--h-hHHHHH----HHHHHHHHHcCCCeEEehh
Q 010443 261 MVARGDLGMEIP--V--E-KIFLAQ----KMMIYKCNLVGKPVVTATQ 299 (510)
Q Consensus 261 ~IgrgDLg~e~~--~--~-~v~~~q----k~ii~~~~~~gkpvivaTq 299 (510)
.+|=|..|.+.. . . .....| +..++.|++.|+|+++-|.
T Consensus 100 ~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~ 147 (272)
T 2y1h_A 100 LLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSR 147 (272)
T ss_dssp CSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECT
T ss_pred EEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 234467777762 1 1 123444 4677889999999998653
No 398
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=30.38 E-value=4.3e+02 Score=28.17 Aligned_cols=232 Identities=15% Similarity=0.143 Sum_probs=123.1
Q ss_pred cEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEeeCeEecCCCCcccCCcc-----------------
Q 010443 122 EMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVV----------------- 184 (510)
Q Consensus 122 ~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~i~~~v~~~G~l~s~K~vnlp~~~----------------- 184 (510)
+.|.+|+-.+-- ..+-++++.+..+|+ .+..+. .+-|.--++..+++|..-
T Consensus 164 d~IlidDG~i~l-----~V~~v~~~~i~~~V~----~gG~L~---~~KgvNlP~~~l~lp~lTekD~~D~l~fa~~~~vD 231 (526)
T 4drs_A 164 STVLIADGSLST-----QVLEIGDDFIVCKVL----NSVTIG---ERKNMNLPGCKVHLPIIGDKDRHDIVDFALKYNLD 231 (526)
T ss_dssp CEEEETTTTEEE-----EEEEECSSEEEEECC----SCCEEC---SSCBEECTTCCCCCCSSCHHHHHHHHHTTTTTTCS
T ss_pred CEEEEeCCCceE-----EEEEEeCCeEEEEec----cCcccc---ccccccCCCcccCcccccchhHHHHHHHHHHhccC
Confidence 446665443321 123355667777764 223332 344555666667766531
Q ss_pred ---ccCCCCChhcHHHHHhccCcCC-------CCEEEEcCCCCHHHHHHHHHHhccC-------C---------------
Q 010443 185 ---VDLPTLTEKDKEDILRWGVPNN-------IDMIALSFVRKGSDLVNVRKVLGPH-------A--------------- 232 (510)
Q Consensus 185 ---~~lp~lt~~D~~di~~~a~~~g-------~d~I~~sfV~sa~dv~~vr~~l~~~-------~--------------- 232 (510)
+.+. =+..|...++++.-+.| .+.-+++++++.+.++.+.+++... |
T Consensus 232 ~ialSFV-r~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~~sDgIMVARGDLgvEip~e~vp~~Q 310 (526)
T 4drs_A 232 FIALSFV-QNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVINFDSICSESDGIMVARGDLGMEIPPEKIFVAQ 310 (526)
T ss_dssp EEEETTC-CSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHH
T ss_pred eeeeccc-CchhhHHHHHHHHHhhCcccccccccceeeeehhccHHHHHHHHHHhhccEEEEECCcccccCCHHHHHHHH
Confidence 1112 25778888854444444 3556889999999999988876421 0
Q ss_pred ----------CCceEEE------EecCH-----HHHhchHHHHhhcCeeEEe----CCcccCCCCchhHHHHHHHHHHHH
Q 010443 233 ----------KNIQLMS------KVENQ-----EGVVNFDDILRETDSFMVA----RGDLGMEIPVEKIFLAQKMMIYKC 287 (510)
Q Consensus 233 ----------~~~~Iia------kIEt~-----~av~nldeI~~~~DgI~Ig----rgDLg~e~~~~~v~~~qk~ii~~~ 287 (510)
..+.|+| +|+++ |.-+=..+|+.-+|++|+. .|.. |. +....+.+|+..+
T Consensus 311 K~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaDavMLSgETA~G~y----Pv-eaV~~m~~I~~~a 385 (526)
T 4drs_A 311 KCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVMLSGETANGAF----PF-DAVNVMSRVCAQA 385 (526)
T ss_dssp HHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSC----HH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCceEEEcchhhcccC----HH-HHHHHHHHHHHHH
Confidence 1233444 33332 3444456667778999997 4443 22 3445556666666
Q ss_pred HHcCCCeEEehhhhHhhhc-CCCC-ChHhH---HHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccchH
Q 010443 288 NLVGKPVVTATQMLESMIK-SPRP-TRAEA---TDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYR 362 (510)
Q Consensus 288 ~~~gkpvivaTqmLeSM~~-~~~P-traEv---~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~ 362 (510)
.+.-. .-+..+.+.. .+.| +.+|. +-+.-|-..++.+|+.-.+| |
T Consensus 386 E~~~~----~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~s--G------------------------ 435 (526)
T 4drs_A 386 ETCID----YPVLYHAIHSSVPKPVAVPEAIACSAVESAHDVNAKLIITITET--G------------------------ 435 (526)
T ss_dssp HTTCC----HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHTTCSEEEEECSS--S------------------------
T ss_pred hhccc----chhhhhhhhhccCCCCCHHHHHHHHHHHHHHhCCCCEEEEECCC--c------------------------
Confidence 44311 1222222211 2222 12221 11122333455554443221 1
Q ss_pred HHHHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEE
Q 010443 363 AVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILS 422 (510)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~T~sG~tA~~iSr~RP~~PIia 422 (510)
..|..+|..-....|+++|.+-.++|.++=+|=-.|++.
T Consensus 436 ---------------------~tA~~iSr~RP~~pI~a~T~~~~~~r~l~L~wGV~p~~~ 474 (526)
T 4drs_A 436 ---------------------NTARLISKYRPSQTIIACTAKPEVARGLKIARGVKTYVL 474 (526)
T ss_dssp ---------------------HHHHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEEC
T ss_pred ---------------------HHHHHHHhhCCCCCEEEECCCHHHHHhhhccCCeEEEEe
Confidence 122233333334569999999999999999988777664
No 399
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=30.27 E-value=1.5e+02 Score=29.35 Aligned_cols=90 Identities=12% Similarity=0.156 Sum_probs=52.8
Q ss_pred hccCcCCCCEEEEcCCCCHH---------------HHHHHHHHh----ccCCCCceEEEEecCHHHHhchH----HHHhh
Q 010443 200 RWGVPNNIDMIALSFVRKGS---------------DLVNVRKVL----GPHAKNIQLMSKVENQEGVVNFD----DILRE 256 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~---------------dv~~vr~~l----~~~~~~~~IiakIEt~~av~nld----eI~~~ 256 (510)
+.+++.|+|+|.+=-+.+-+ +...+-..| +..+.+..|+.+ .|.+-++ ++...
T Consensus 129 ~~~~~kG~DGvflDnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ar~~~P~~~ii~n----NG~~i~~~d~~~l~~~ 204 (309)
T 2aam_A 129 DRVIDQGFKGIYLDRIDSFEYWAQEGVISRRSAARKMINFVLEIAEYVRERKPDMLIIPQ----NGENILDFDDGQLAST 204 (309)
T ss_dssp HHHHHTTCSEEEEECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEB----SCGGGGGGCCSHHHHH
T ss_pred HHHHHcCCCeEeecccchhhhccccCCcchhhhHHHHHHHHHHHHHHHHhhCCCcEEEEe----cCHHhhcccHhHHHhh
Confidence 45678999999998886533 222222222 444556666655 3555566 77777
Q ss_pred cCeeEEeCCcccC----CCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010443 257 TDSFMVARGDLGM----EIPVEKIFLAQKMMIYKCNLVGKPVVT 296 (510)
Q Consensus 257 ~DgI~IgrgDLg~----e~~~~~v~~~qk~ii~~~~~~gkpviv 296 (510)
.||+..-- +-. ..+ +.-......-+..++++||||+.
T Consensus 205 id~v~~Es--~~~~~~~~~~-~~e~~~~~~~l~~~~~~GkpV~~ 245 (309)
T 2aam_A 205 VSGWAVEN--LFYLKTIPLE-ENETKSRLEYLIRLNRKGKFILS 245 (309)
T ss_dssp CSEEEEES--SSEETTEECC-HHHHHHHHHHHHHHHHTTCEEEE
T ss_pred cCEEEeee--EEecCCCCCC-HHHHHHHHHHHHHHHHcCCcEEE
Confidence 89887641 111 111 12222234455677788999987
No 400
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=30.01 E-value=83 Score=30.77 Aligned_cols=69 Identities=13% Similarity=0.113 Sum_probs=42.8
Q ss_pred CCeEEEEecCCCC---------CC----HHHHHHHHHhCCCeEEEee-cCC-------CHHHHHHHHHHHHHHHHhcCCc
Q 010443 20 PKTKIVCTLGPAS---------RS----VPMLEKLLRAGMNVARFNF-SHG-------THEYQQETLNNLRAAMHNTQIL 78 (510)
Q Consensus 20 ~~tkIi~TiGp~~---------~~----~~~l~~li~~G~~~~RiN~-sh~-------~~~~~~~~i~~ir~~~~~~~~~ 78 (510)
.+|+|++-|.-.- .+ .+..++|++.|+++.=+|. |-. ..+|+.+++..++...++ +.|
T Consensus 4 ~~~~imgilN~TpDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~~p 82 (280)
T 1eye_A 4 APVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GIT 82 (280)
T ss_dssp -CCEEEEEEECSCCTTCSSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-TCC
T ss_pred CCcEEEEEEeCCCCCcCCCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-CCE
Confidence 3577887764321 12 3445779999999999998 321 257788888888887664 544
Q ss_pred EEEEecCCCCeeE
Q 010443 79 CAVMLDTKGPEIR 91 (510)
Q Consensus 79 v~i~~Dl~Gp~iR 91 (510)
|.+|+.-|++=
T Consensus 83 --iSIDT~~~~va 93 (280)
T 1eye_A 83 --VSIDTMRADVA 93 (280)
T ss_dssp --EEEECSCHHHH
T ss_pred --EEEeCCCHHHH
Confidence 56688765543
No 401
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=29.96 E-value=78 Score=31.28 Aligned_cols=31 Identities=26% Similarity=0.328 Sum_probs=24.4
Q ss_pred CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 291 GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 291 gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
+.|+|....+- .-.|+..++..|||++++..
T Consensus 256 ~ipvia~GGI~------------~~~d~~kal~~GAd~V~igr 286 (332)
T 1vcf_A 256 HLPLVASGGVY------------TGTDGAKALALGADLLAVAR 286 (332)
T ss_dssp SSCEEEESSCC------------SHHHHHHHHHHTCSEEEECG
T ss_pred CCeEEEECCCC------------CHHHHHHHHHhCCChHhhhH
Confidence 68988865543 34688999999999999975
No 402
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=29.92 E-value=1.8e+02 Score=28.69 Aligned_cols=40 Identities=25% Similarity=0.282 Sum_probs=31.2
Q ss_pred HHHHHHHHhc----CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 384 SSAVRTANKA----RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 384 ~~av~~A~~~----~a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
..+.++.+++ ..+.||+.+-+|.|+.-+++ ..|.+.|+++
T Consensus 185 t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigV 232 (342)
T 4d9b_A 185 ESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGV 232 (342)
T ss_dssp HHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEE
Confidence 3456676665 46899999999998766654 5799999999
No 403
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=29.84 E-value=52 Score=33.79 Aligned_cols=51 Identities=14% Similarity=0.136 Sum_probs=34.7
Q ss_pred CHHHHHHHHHhCCCeEEEeecC-------CCHH--HHHHHHHHHHHHHHhcCCcEEEEecCC
Q 010443 34 SVPMLEKLLRAGMNVARFNFSH-------GTHE--YQQETLNNLRAAMHNTQILCAVMLDTK 86 (510)
Q Consensus 34 ~~~~l~~li~~G~~~~RiN~sh-------~~~~--~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 86 (510)
+.+.++.|-++|+|++||-+++ +.+- ...+.++++=+.+.++| +.+++|+-
T Consensus 75 te~D~~~ik~~G~N~VRipi~~~~~~~~~~~py~~~~~~~ld~vV~~a~~~G--l~VILDlH 134 (399)
T 3n9k_A 75 TEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNN--IRVWIDLH 134 (399)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred cHHHHHHHHHcCCCEEEEcccHHHccCCCCCccchhHHHHHHHHHHHHHHCC--CEEEEEec
Confidence 5788999999999999999873 1110 13345555555566666 56777864
No 404
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=29.81 E-value=60 Score=32.36 Aligned_cols=53 Identities=13% Similarity=0.085 Sum_probs=35.8
Q ss_pred CCHHHHHHHH-HhCCCeEEEeecCCC-----HHHHHHHHHHHHHHHHhcCCcEEEEecCCC
Q 010443 33 RSVPMLEKLL-RAGMNVARFNFSHGT-----HEYQQETLNNLRAAMHNTQILCAVMLDTKG 87 (510)
Q Consensus 33 ~~~~~l~~li-~~G~~~~RiN~sh~~-----~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 87 (510)
.+.+.++.|. +.|+|++|+-++.+. .++..+.++.+=+.+.+.|. .+++|+-+
T Consensus 54 ~~~~d~~~l~~~~G~N~VRip~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi--~VIld~H~ 112 (364)
T 1g01_A 54 VNENAFVALSNDWGSNMIRLAMYIGENGYATNPEVKDLVYEGIELAFEHDM--YVIVDWHV 112 (364)
T ss_dssp CSHHHHHHHHTTSCCSEEEEEEESSSSSTTTCTTHHHHHHHHHHHHHHTTC--EEEEEEEC
T ss_pred cCHHHHHHHHHHCCCCEEEEEeeeCCCCCccCHHHHHHHHHHHHHHHHCCC--EEEEEecc
Confidence 4678899997 899999999888431 12233455555555666774 56778775
No 405
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=29.69 E-value=82 Score=29.73 Aligned_cols=103 Identities=15% Similarity=0.165 Sum_probs=62.0
Q ss_pred CEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh--cCeeEEeCCcccCCCCchhHHHHHHHHHH
Q 010443 208 DMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE--TDSFMVARGDLGMEIPVEKIFLAQKMMIY 285 (510)
Q Consensus 208 d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~--~DgI~IgrgDLg~e~~~~~v~~~qk~ii~ 285 (510)
..++.|| +.+.+..+++.. .++.+..-.+... .+..+.++. ++++-..- ..+-+..++
T Consensus 145 ~vii~SF--~~~~l~~~~~~~----p~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~~------------~~~~~~~v~ 204 (252)
T 3qvq_A 145 PLLFSSF--NYFALVSAKALW----PEIARGYNVSAIP--SAWQERLEHLDCAGLHIHQ------------SFFDVQQVS 204 (252)
T ss_dssp CEEEEES--CHHHHHHHHHHC----TTSCEEEECSSCC--TTHHHHHHHHTCSEEEEEG------------GGCCHHHHH
T ss_pred CEEEEeC--CHHHHHHHHHHC----CCCcEEEEEecCc--hhHHHHHHHcCCeEEecch------------hhCCHHHHH
Confidence 4677776 677777777754 2344433333210 122233333 23333321 122357889
Q ss_pred HHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHH
Q 010443 286 KCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRR 350 (510)
Q Consensus 286 ~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~ 350 (510)
.|+++|++|.+=|- -+..++..++..|+|+|+- .||..+.+.+.+
T Consensus 205 ~~~~~G~~v~~WTv-------------n~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~~ 249 (252)
T 3qvq_A 205 DIKAAGYKVLAFTI-------------NDESLALKLYNQGLDAVFS-------DYPQKIQSAIDS 249 (252)
T ss_dssp HHHHTTCEEEEECC-------------CCHHHHHHHHHTTCCEEEE-------SSHHHHHHHHHH
T ss_pred HHHHCCCEEEEEcC-------------CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHH
Confidence 99999999988662 1234567778899999986 589888777653
No 406
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=29.51 E-value=2.7e+02 Score=27.16 Aligned_cols=10 Identities=20% Similarity=-0.240 Sum_probs=6.1
Q ss_pred CCEEEEEeec
Q 010443 489 GDAVVALHRI 498 (510)
Q Consensus 489 GD~VVvv~g~ 498 (510)
-|.||+-.|.
T Consensus 178 ~d~vv~pvG~ 187 (325)
T 3dwg_A 178 ITHFVAGLGT 187 (325)
T ss_dssp CCEEEEECSS
T ss_pred CCEEEEecCc
Confidence 4666666655
No 407
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=29.38 E-value=1.5e+02 Score=30.02 Aligned_cols=117 Identities=13% Similarity=0.135 Sum_probs=66.6
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.++++. .|..+....+...-..|++.+...+ . .-++++...+++++- ..++-
T Consensus 126 a~A~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~Vv~v~~-----~-~~~a~~~a~~~~~~~-g~~~v 187 (398)
T 4d9i_A 126 GVAWAAQQLGQNAVIY-----------MPKGSAQERVDAILNLGAECIVTDM-----N-YDDTVRLTMQHAQQH-GWEVV 187 (398)
T ss_dssp HHHHHHHHHTCEEEEE-----------ECTTCCHHHHHHHHTTTCEEEECSS-----C-HHHHHHHHHHHHHHH-TCEEC
T ss_pred HHHHHHHHcCCCEEEE-----------EeCCCCHHHHHHHHHcCCEEEEECC-----C-HHHHHHHHHHHHHHc-CCEEe
Confidence 5566789999998764 2333333455566678999866643 2 346777666665443 21110
Q ss_pred HHHHHHHHhcCCCCCC-----chHHHHHHHHHHHHhcC-----CcEEEEEcCCchHHHHHHhh------CCCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMS-----PLESLASSAVRTANKAR-----AKLIVVLTRGGTTAKLVAKY------RPAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~-----~~~~ia~~av~~A~~~~-----a~aIvv~T~sG~tA~~iSr~------RP~~PIiav 423 (510)
.+ +.-.+-+ ....-...+.++..+++ .+.||+.+-+|.++.-++++ .|...|+++
T Consensus 188 ~~-------~~~~g~~~~~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigV 258 (398)
T 4d9i_A 188 QD-------TAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIV 258 (398)
T ss_dssp CS-------SCBTTBCHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred cC-------cccCCcCCCCchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 00 0000000 11112233445555542 68999999999987776654 367889888
No 408
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=29.34 E-value=1.2e+02 Score=28.52 Aligned_cols=53 Identities=11% Similarity=0.148 Sum_probs=39.8
Q ss_pred HHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEeccCCCCCCCHHHHHHHHHHHH
Q 010443 280 QKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGESAAGAYPEIAVKIMRRIC 352 (510)
Q Consensus 280 qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~ 352 (510)
-...++.++++|+++.+-|- ++ ..++.. +...|+|+|+- .||..+.+.+++.|
T Consensus 183 ~~~~v~~~~~~G~~v~~wTv------n~-------~~~~~~~l~~~GvdgIiT-------D~p~~~~~~~~~~~ 236 (248)
T 1zcc_A 183 RPGIIEASRKAGLEIMVYYG------GD-------DMAVHREIATSDVDYINL-------DRPDLFAAVRSGMA 236 (248)
T ss_dssp SHHHHHHHHHHTCEEEEECC------CC-------CHHHHHHHHHSSCSEEEE-------SCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEECC------CC-------HHHHHHHHHHcCCCEEEE-------CCHHHHHHHHHHhc
Confidence 57889999999999998772 21 234566 77889999875 58988877766543
No 409
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=29.18 E-value=1e+02 Score=30.33 Aligned_cols=68 Identities=16% Similarity=0.225 Sum_probs=46.7
Q ss_pred HHHHHHHHhccCCCCceEEEEecCHHHHhchHHHH-----------hhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHH
Q 010443 220 DLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDIL-----------RETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCN 288 (510)
Q Consensus 220 dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~-----------~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~ 288 (510)
-++.+++.+.+.|.++.|.+--+.....+|+++++ +-.|.|+-+-. =+..+..+-++|.
T Consensus 90 Ka~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D----------n~~~R~~in~~c~ 159 (292)
T 3h8v_A 90 KVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD----------NFEARMTINTACN 159 (292)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS----------SHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc----------chhhhhHHHHHHH
Confidence 34556667777788888888776666667777765 23566664422 2245677889999
Q ss_pred HcCCCeEEe
Q 010443 289 LVGKPVVTA 297 (510)
Q Consensus 289 ~~gkpviva 297 (510)
++|+|.+.+
T Consensus 160 ~~~~Pli~~ 168 (292)
T 3h8v_A 160 ELGQTWMES 168 (292)
T ss_dssp HHTCCEEEE
T ss_pred HhCCCEEEe
Confidence 999998753
No 410
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=29.14 E-value=71 Score=31.50 Aligned_cols=54 Identities=17% Similarity=0.075 Sum_probs=36.1
Q ss_pred CCCHHHHHHHH-HhCCCeEEEeecCCCH-----HHHHHHHHHHHHHHHhcCCcEEEEecCCC
Q 010443 32 SRSVPMLEKLL-RAGMNVARFNFSHGTH-----EYQQETLNNLRAAMHNTQILCAVMLDTKG 87 (510)
Q Consensus 32 ~~~~~~l~~li-~~G~~~~RiN~sh~~~-----~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 87 (510)
..+.+.++.|. +.|+|++|+-+.+... +...+.++.+=+.++++|. .+++|+-+
T Consensus 68 ~~~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi--~VilD~H~ 127 (327)
T 3pzt_A 68 YVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKELGI--YVIIDWHI 127 (327)
T ss_dssp GCSHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGGHHHHHHHHHHHHHHTC--EEEEEEEC
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHHHHHHHHHHHHHHHCCC--EEEEEecc
Confidence 34678899986 6899999998875321 1234555555566677775 46677753
No 411
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=29.05 E-value=50 Score=27.16 Aligned_cols=39 Identities=15% Similarity=0.279 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC--------chHHHHHHhhCCCCcEEEE
Q 010443 382 LASSAVRTANKARAKLIVVLTRG--------GTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 382 ia~~av~~A~~~~a~aIvv~T~s--------G~tA~~iSr~RP~~PIiav 423 (510)
.+...++.|. +++.||+-++. |.++..+.+.-| |||+.+
T Consensus 91 ~~~~I~~~a~--~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 137 (138)
T 3idf_A 91 PVEMVLEEAK--DYNLLIIGSSENSFLNKIFASHQDDFIQKAP-IPVLIV 137 (138)
T ss_dssp HHHHHHHHHT--TCSEEEEECCTTSTTSSCCCCTTCHHHHHCS-SCEEEE
T ss_pred hHHHHHHHHh--cCCEEEEeCCCcchHHHHhCcHHHHHHhcCC-CCEEEe
Confidence 4455556666 99999988753 677888887755 999987
No 412
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=29.05 E-value=2.1e+02 Score=27.25 Aligned_cols=119 Identities=17% Similarity=0.173 Sum_probs=65.1
Q ss_pred CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCC---CCCCCHHHHHHHHHHHHHHHhcccchHHHHHH
Q 010443 291 GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGES---AAGAYPEIAVKIMRRICIEAESSLDYRAVFKE 367 (510)
Q Consensus 291 gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Et---a~G~yP~~~V~~m~~i~~~aE~~~~~~~~~~~ 367 (510)
|.++-++|-+ ..-..+.|+.+-+..+..|+.+|||.|=+---- -.|+|.. ..+-+..+.+.+.... -+..++
T Consensus 76 ~s~v~v~tVi--gFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~-v~~eI~~v~~a~~~~~-lKVIlE- 150 (239)
T 3ngj_A 76 GTGVKVCTVI--GFPLGATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYDD-VEKDVKAVVDASGKAL-TKVIIE- 150 (239)
T ss_dssp TSSCEEEEEE--STTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHH-HHHHHHHHHHHHTTSE-EEEECC-
T ss_pred CCCCeEEEEe--ccCCCCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHHH-HHHHHHHHHHHhcCCc-eEEEEe-
Confidence 4444444432 222455677888899999999999997542111 1255543 4555555555554210 000000
Q ss_pred HHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCchH--------HHHHHh-hCCCCcEEEE
Q 010443 368 MIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTT--------AKLVAK-YRPAVPILSV 423 (510)
Q Consensus 368 ~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~T~sG~t--------A~~iSr-~RP~~PIiav 423 (510)
.. ..+ +.--..|+++|.+.+|+ +|=|.+|.+ .+++.+ ..+++||.|-
T Consensus 151 ----t~-~Lt--~eei~~a~~ia~~aGAD--fVKTSTGf~~ggAt~~dv~lmr~~vg~~v~VKas 206 (239)
T 3ngj_A 151 ----CC-YLT--NEEKVEVCKRCVAAGAE--YVKTSTGFGTHGATPEDVKLMKDTVGDKALVKAA 206 (239)
T ss_dssp ----GG-GSC--HHHHHHHHHHHHHHTCS--EEECCCSSSSCCCCHHHHHHHHHHHGGGSEEEEE
T ss_pred ----cC-CCC--HHHHHHHHHHHHHHCcC--EEECCCCCCCCCCCHHHHHHHHHhhCCCceEEEe
Confidence 00 011 23355788999999999 666776643 122221 2467777776
No 413
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=28.99 E-value=1e+02 Score=31.31 Aligned_cols=95 Identities=7% Similarity=0.152 Sum_probs=56.9
Q ss_pred HHHhccCcCCCCEEEEcC-------CCCHHHHHHHHHHhccCCCCceEEEEe---cCHHHHhchHHHHhh-cCeeEEeCC
Q 010443 197 DILRWGVPNNIDMIALSF-------VRKGSDLVNVRKVLGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARG 265 (510)
Q Consensus 197 di~~~a~~~g~d~I~~sf-------V~sa~dv~~vr~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-~DgI~Igrg 265 (510)
.+.++.++.|+|+|++.- ....|-.+-++..++..+..+.+|+-+ -|.++++....-.+. +|++++-+-
T Consensus 84 ~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~P 163 (360)
T 4dpp_A 84 DLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 163 (360)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 333688899999998832 222333333344444445678899877 366666666555554 799998755
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 266 DLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 266 DLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.+. ..+.+.+...-+.|.++ .|+++.
T Consensus 164 yY~-k~sq~gl~~hf~~IA~a-----~PiilY 189 (360)
T 4dpp_A 164 YYG-KTSIEGLIAHFQSVLHM-----GPTIIY 189 (360)
T ss_dssp CSS-CCCHHHHHHHHHTTGGG-----SCEEEE
T ss_pred CCC-CCCHHHHHHHHHHHHHh-----CCEEEE
Confidence 442 23445555555555442 588764
No 414
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=28.83 E-value=62 Score=32.33 Aligned_cols=106 Identities=16% Similarity=0.164 Sum_probs=65.0
Q ss_pred hhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCC--CceEEEEe-------c--CHH-HHhchHHHHhhcCe
Q 010443 192 EKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAK--NIQLMSKV-------E--NQE-GVVNFDDILRETDS 259 (510)
Q Consensus 192 ~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~--~~~IiakI-------E--t~~-av~nldeI~~~~Dg 259 (510)
+.|...+.+.|.+.|++.++++-+ +.++...+.++.+.... .+.+++-+ . +.+ .++.|.++++..+.
T Consensus 51 ~~d~~~vl~rA~~aGV~~ii~~g~-~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~ 129 (325)
T 3ipw_A 51 EEDIDVVLQRAERNGLSHIIITSG-CLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLCEKNID 129 (325)
T ss_dssp CCCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGGGGGGGSTTHHHHHHHHHHHTGG
T ss_pred ccCHHHHHHHHHHcCCcEEEEccC-CHHHHHHHHHHHHHCCCcccceEEEEEEECcchhhcCCchHHHHHHHHHHhcCCC
Confidence 457776668899999998888765 67777777666543210 01344333 1 111 45566666655433
Q ss_pred eEEeCCcccCCCCc-h-hHHHHH----HHHHHHHHH-cCCCeEEeh
Q 010443 260 FMVARGDLGMEIPV-E-KIFLAQ----KMMIYKCNL-VGKPVVTAT 298 (510)
Q Consensus 260 I~IgrgDLg~e~~~-~-~v~~~q----k~ii~~~~~-~gkpvivaT 298 (510)
=++|=|+.|.++.. . .-...| ++-++.|++ .++|+++-+
T Consensus 130 ~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~ 175 (325)
T 3ipw_A 130 KVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHC 175 (325)
T ss_dssp GEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEE
T ss_pred CEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 44555777777643 1 112344 456788999 999999865
No 415
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=28.83 E-value=50 Score=31.64 Aligned_cols=57 Identities=16% Similarity=0.098 Sum_probs=36.1
Q ss_pred EEEEecCCC--CCCHHHHHHHHHhCCCeEEEeecCCCHHH-HHHHHHHHHHHHHhcCCcEEEEe
Q 010443 23 KIVCTLGPA--SRSVPMLEKLLRAGMNVARFNFSHGTHEY-QQETLNNLRAAMHNTQILCAVML 83 (510)
Q Consensus 23 kIi~TiGp~--~~~~~~l~~li~~G~~~~RiN~sh~~~~~-~~~~i~~ir~~~~~~~~~v~i~~ 83 (510)
+...|.|-. ..+.+.++.|.++|+|.+=+-.|.|...+ ..++++.+|+ ...|+.+|.
T Consensus 9 ~~~i~~gDP~~~~t~~~~~~l~~~GaD~ielG~S~Gvt~~~~~~~v~~ir~----~~~Pivlm~ 68 (240)
T 1viz_A 9 WKHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR----FLVPCVLEV 68 (240)
T ss_dssp CCEEEEECTTSCCCHHHHHHHHTSCCSEEEECC----CHHHHHHHHHHHTT----SSSCEEEEC
T ss_pred ceEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhhC----cCCCEEEec
Confidence 344455543 35789999999999999999999886543 5555555553 566765543
No 416
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=28.74 E-value=84 Score=31.66 Aligned_cols=73 Identities=14% Similarity=0.216 Sum_probs=45.9
Q ss_pred cccccccccCCCCCCCCCeEEEEecCCCCCCHH----HHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcE
Q 010443 4 IDIEGLLRDVPNDKRLPKTKIVCTLGPASRSVP----MLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILC 79 (510)
Q Consensus 4 ~~~~~~~~~~p~~~~~~~tkIi~TiGp~~~~~~----~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v 79 (510)
.-+.++|++..+ .+..+-+|+|- .+++ ..+++++.|.+.+.+.+.....++-.+.++.+|++. |.-+
T Consensus 122 ~Pl~~LLGg~~r----~~v~~~~t~~~--~~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~---g~~~ 192 (377)
T 3my9_A 122 LSVADLLGGRVR----DRIPLSFSIAD--PDFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEF---GERI 192 (377)
T ss_dssp CBTTGGGTCCSC----SEEEBCEEECC--SSHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHH---GGGS
T ss_pred CcHHHHhCCCCC----CeEEEEEecCC--CCHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHh---CCCC
Confidence 345667774322 23445567752 2333 345567789999999998877777777888888764 3334
Q ss_pred EEEecC
Q 010443 80 AVMLDT 85 (510)
Q Consensus 80 ~i~~Dl 85 (510)
.+++|.
T Consensus 193 ~l~vDa 198 (377)
T 3my9_A 193 DLRLDF 198 (377)
T ss_dssp EEEEEC
T ss_pred eEEEeC
Confidence 566664
No 417
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=28.55 E-value=1.4e+02 Score=32.72 Aligned_cols=99 Identities=13% Similarity=0.079 Sum_probs=71.3
Q ss_pred ChhcHHHHHhccCcCCCCEEEEcCCC------------CHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh--
Q 010443 191 TEKDKEDILRWGVPNNIDMIALSFVR------------KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-- 256 (510)
Q Consensus 191 t~~D~~di~~~a~~~g~d~I~~sfV~------------sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-- 256 (510)
++..+.-| +||.++|.++|.+---- -..|++++.+|.+++ .+.|+.--|+..--+++++.++.
T Consensus 308 ~~~~k~yI-DfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~k--gV~i~lw~~~~~~~~~~~~~~~~~~ 384 (641)
T 3a24_A 308 NPTYKAYI-DFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASK--NVGIILWAGYHAFERDMENVCRHYA 384 (641)
T ss_dssp HHHHHHHH-HHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHT--TCEEEEEEEHHHHHTSHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhc--CCEEEEEeeCcchHHHHHHHHHHHH
Confidence 44556777 99999999999973211 124799999999875 57888888886545567777775
Q ss_pred ---cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010443 257 ---TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 296 (510)
Q Consensus 257 ---~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviv 296 (510)
.+||-++=- +-+-..+.....++++.|++++.-|..
T Consensus 385 ~~Gv~gvK~Df~----~~~~Q~~v~~y~~i~~~aA~~~l~V~f 423 (641)
T 3a24_A 385 EMGVKGFKVDFM----DRDDQEMTAFNYRAAEMCAKYKLILDL 423 (641)
T ss_dssp HHTCCEEEEECC----CCCSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HcCCCEEEECCC----CCCcHHHHHHHHHHHHHHHHcCCEEEc
Confidence 588888621 111256777788999999999977665
No 418
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=28.51 E-value=99 Score=29.18 Aligned_cols=66 Identities=12% Similarity=0.193 Sum_probs=43.4
Q ss_pred HHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 221 LVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 221 v~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
++.+++.+.+.+.++.+.+.-+... -+|++++++-.|.|+.+-++. .....+.+.|++.|+|.+.+
T Consensus 87 a~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~~----------~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 87 VESARDALTRINPHIAITPVNALLD-DAELAALIAEHDLVLDCTDNV----------AVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp HHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHTSSEEEECCSSH----------HHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHCCCcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCCH----------HHHHHHHHHHHHcCCCEEEe
Confidence 4445555555555666554333322 247788888889888874332 36678889999999998875
No 419
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=28.41 E-value=3.8e+02 Score=25.50 Aligned_cols=137 Identities=15% Similarity=0.104 Sum_probs=75.2
Q ss_pred CCccccCCCCChhcH-HHHHhccCcCCCCEEE-----EcCCCCHHHHHHHHHHhccCCCCceEEEEecCHH---------
Q 010443 181 PGVVVDLPTLTEKDK-EDILRWGVPNNIDMIA-----LSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQE--------- 245 (510)
Q Consensus 181 p~~~~~lp~lt~~D~-~di~~~a~~~g~d~I~-----~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~--------- 245 (510)
|..++++..-|.++. +.+ +.+...|+|.|= +....+.+++.++-..+++.-.+.++|.-+=|..
T Consensus 20 PkIcvpl~~~t~~e~l~~a-~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~ 98 (258)
T 4h3d_A 20 PKICVPIIGKNKKDIIKEA-KELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISR 98 (258)
T ss_dssp CEEEEEECCSSHHHHHHHH-HHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCH
T ss_pred CEEEEEeCCCCHHHHHHHH-HHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCH
Confidence 555555544444443 333 455677888763 2333444555444333333223567777774421
Q ss_pred --HHhchHHHHhh--cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHH-HHH
Q 010443 246 --GVVNFDDILRE--TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATD-VAN 320 (510)
Q Consensus 246 --av~nldeI~~~--~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~D-v~~ 320 (510)
-++-+..++.. +|.|=| |+.. -....++++..+++.|..+|++-+=+ +..|+..|+.. +..
T Consensus 99 ~~~~~ll~~~~~~~~~d~iDv-------El~~--~~~~~~~l~~~a~~~~~kiI~S~Hdf-----~~TP~~~el~~~~~~ 164 (258)
T 4h3d_A 99 DYYTTLNKEISNTGLVDLIDV-------ELFM--GDEVIDEVVNFAHKKEVKVIISNHDF-----NKTPKKEEIVSRLCR 164 (258)
T ss_dssp HHHHHHHHHHHHTTCCSEEEE-------EGGG--CHHHHHHHHHHHHHTTCEEEEEEEES-----SCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCchhhHH-------hhhc--cHHHHHHHHHHHHhCCCEEEEEEecC-----CCCCCHHHHHHHHHH
Confidence 11222333322 344322 2222 22466788899999999999876643 45788888755 444
Q ss_pred HHHcCCceEEec
Q 010443 321 AVLDGTDCVMLS 332 (510)
Q Consensus 321 av~~G~D~imLs 332 (510)
+...|+|-+=+.
T Consensus 165 ~~~~gaDIvKia 176 (258)
T 4h3d_A 165 MQELGADLPKIA 176 (258)
T ss_dssp HHHTTCSEEEEE
T ss_pred HHHhCCCEEEEE
Confidence 677788876553
No 420
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=28.35 E-value=2e+02 Score=28.96 Aligned_cols=49 Identities=16% Similarity=0.152 Sum_probs=29.8
Q ss_pred ccccccccCCCCCCCCCeEEEEe-cCCCCC-------CHH----HHHHHHHhCCCeEEEeec----CCC
Q 010443 5 DIEGLLRDVPNDKRLPKTKIVCT-LGPASR-------SVP----MLEKLLRAGMNVARFNFS----HGT 57 (510)
Q Consensus 5 ~~~~~~~~~p~~~~~~~tkIi~T-iGp~~~-------~~~----~l~~li~~G~~~~RiN~s----h~~ 57 (510)
-+-++|+...+ .+....+| ++.... +++ ..+++.+.|.+.+.|+.. ||.
T Consensus 117 Pl~~llGg~~~----~~vp~y~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~ 181 (410)
T 2gl5_A 117 PVYQLLGGKTN----EKLRTYASQLQFGWGDKNHILVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGD 181 (410)
T ss_dssp BHHHHTTSCSC----SSEEEEEECGGGCCTTCCSCCCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSC
T ss_pred cHHHHcCCCcc----CceeEeEecccCCccccccccCCHHHHHHHHHHHHHcCCCEEEEeccccCCccc
Confidence 34556664221 34677777 752111 343 446678899999999975 665
No 421
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=28.32 E-value=33 Score=35.27 Aligned_cols=286 Identities=19% Similarity=0.203 Sum_probs=140.6
Q ss_pred HHHHHHHHHhCCCeEEEeecCCCHH------HHHHHHHHHHHHHHhcCCcEEEEecCC-CCeeEeeecCCCCcEEecCCC
Q 010443 35 VPMLEKLLRAGMNVARFNFSHGTHE------YQQETLNNLRAAMHNTQILCAVMLDTK-GPEIRTGFLKDGKPIQLKEGQ 107 (510)
Q Consensus 35 ~~~l~~li~~G~~~~RiN~sh~~~~------~~~~~i~~ir~~~~~~~~~v~i~~Dl~-Gp~iR~g~~~~~~~i~l~~G~ 107 (510)
...|+.+++.|..+.- +||-... ....+---.+..++.+|++|...-|.- | +.+++|+
T Consensus 41 lpTI~~ll~~gakvil--~SHlGRP~kG~~~~~~SL~pva~~L~~lLg~~V~f~~d~~~G-------------v~l~~G~ 105 (387)
T 1zmr_A 41 LPTIELALKQGAKVMV--TSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG-------------VDVAEGE 105 (387)
T ss_dssp HHHHHHHHHTTCEEEE--ECCCSSCBTTBCCGGGCSHHHHHHHHHHCSSCEEEESCCTTC-------------CCCCTTC
T ss_pred HHHHHHHHHCCCEEEE--EccCCCCCCCCcCCccCHHHHHHHHHHHhCCCCEECcccccC-------------ccCCCCe
Confidence 5689999999998755 7994422 212222223334556789998887876 6 2267788
Q ss_pred EEEEEecCCCCCCccEEecCCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEeeCeEecCCCCcccCCccccC
Q 010443 108 EITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDL 187 (510)
Q Consensus 108 ~v~l~~~~~~~~~~~~i~v~~~~~~~~v~~gd~i~idDG~i~l~V~~~~~~~~~i~~~v~~~G~l~s~K~vnlp~~~~~l 187 (510)
.+.|-.---..+++. |.++|.+.+..---||+.|.-=. .+ |..-..-+....+
T Consensus 106 VlLLEN~RF~~~E~~----nd~~fa~~LA~l~DvyVNDAFgt-----aH------------------RahaS~~gi~~~l 158 (387)
T 1zmr_A 106 LVVLENVRFNKGEKK----DDETLSKKYAALCDVFVMDAFGT-----AH------------------RAQASTHGIGKFA 158 (387)
T ss_dssp EEEECCGGGSTTTTT----TCHHHHHHHHHTCSEEEECCGGG-----TT------------------SCCCCCCCHHHHS
T ss_pred EEEEcccCCCcchhc----CCHHHHHHHHhhCCEEEeccccc-----cc------------------cccCchhhhhhhC
Confidence 777653210112221 44567776666555888873210 00 0111111111111
Q ss_pred CCCChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCC-CceEE--EEecCHHHHhchHHHHhhcCeeEEeC
Q 010443 188 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAK-NIQLM--SKVENQEGVVNFDDILRETDSFMVAR 264 (510)
Q Consensus 188 p~lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~-~~~Ii--akIEt~~av~nldeI~~~~DgI~Igr 264 (510)
| ..-+-++ =..+++.+.+.+..-.. -+.|+ ||+.+.-++ ++.+++-+|.++||-
T Consensus 159 p---------------~~~aG~L------m~kEl~~l~k~l~~p~rP~vaIlGGaKVsdKi~v--i~nLl~kvD~liiGG 215 (387)
T 1zmr_A 159 D---------------VACAGPL------LAAELDALGKALKEPARPMVAIVGGSKVSTKLTV--LDSLSKIADQLIVGG 215 (387)
T ss_dssp S---------------EEEECHH------HHHHHHHHHHHHSSCSSSEEEEEEESCTTTTHHH--HHHHHTTCSEEEEEE
T ss_pred c---------------hhhccHH------HHHHHHHHHHHhcCCCCCeEEEEcCcchhhHHHH--HHHHHHhcCEEEeCc
Confidence 1 0000000 14567777776653211 11222 577776666 778888899999983
Q ss_pred -----------CcccCCCCchhHHHHHHHHHHHHHHcCCCe--EEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEe
Q 010443 265 -----------GDLGMEIPVEKIFLAQKMMIYKCNLVGKPV--VTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 331 (510)
Q Consensus 265 -----------gDLg~e~~~~~v~~~qk~ii~~~~~~gkpv--ivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imL 331 (510)
.+.|-++--++....-++++++ .+.-.|+ .+|..+ . ...+++ +.++ +.+-+ |...|
T Consensus 216 gma~tFl~A~G~~iG~Sl~E~d~~~~a~~ll~~-~~i~lPvD~vva~~f----~-~~~~~~--~~~~-~~ip~--~~m~l 284 (387)
T 1zmr_A 216 GIANTFIAAQGHDVGKSLYEADLVDEAKRLLTT-CNIPVPSDVRVATEF----S-ETAPAT--LKSV-NDVKA--DEQIL 284 (387)
T ss_dssp HHHHHHHHHTTCCCTTCSCCGGGHHHHHHHHTT-SCCCCCSEEEEESSS----S-SSCCCE--EEEG-GGCCT--TCEEE
T ss_pred HHHHHHHHHcCCCCCccccchhhHHHHHHHHHh-CCccCCccceeeecc----C-CCCceE--Eeeh-hhCCC--CCEEe
Confidence 2344443334444555566665 3344553 443221 0 111111 1111 11111 23333
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhcccchHHH--HHHHHhcCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCchHHH
Q 010443 332 SGESAAGAYPEIAVKIMRRICIEAESSLDYRAV--FKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAK 409 (510)
Q Consensus 332 s~Eta~G~yP~~~V~~m~~i~~~aE~~~~~~~~--~~~~~~~~~~~~~~~~~ia~~av~~A~~~~a~aIvv~T~sG~tA~ 409 (510)
. +| -++++...+++..+...+|.-.. |+. .. =..-+.+++.+..+ .++ +..--.|.|+.
T Consensus 285 D----iG---p~T~~~~~~~i~~akTivWNGPmGvFE~-~~----Fa~GT~~va~aia~----~~~---~sivGGGDt~a 345 (387)
T 1zmr_A 285 D----IG---DASAQELAEILKNAKTILWNGPVGVFEF-PN----FRKGTEIVANAIAD----SEA---FSIAGGGDTLA 345 (387)
T ss_dssp E----EC---HHHHHHHHHHHHHCSEEEEESCSBCTTS-GG----GCHHHHHHHHHHHH----SSS---EEEECSHHHHH
T ss_pred e----cC---HHHHHHHHHHHhhCCEEEEECCcccccC-ch----HHHHHHHHHHHHHh----cCC---eEEECCHHHHH
Confidence 2 22 26788899999998887764210 110 00 00012334433333 244 33334788988
Q ss_pred HHHhhC
Q 010443 410 LVAKYR 415 (510)
Q Consensus 410 ~iSr~R 415 (510)
.+.++-
T Consensus 346 av~~~g 351 (387)
T 1zmr_A 346 AIDLFG 351 (387)
T ss_dssp HHHHHT
T ss_pred HHHHcC
Confidence 888764
No 422
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=28.32 E-value=73 Score=33.11 Aligned_cols=53 Identities=19% Similarity=0.176 Sum_probs=32.4
Q ss_pred CCCHHHH-HHHHHhCCCeEEEeecCCCH--------HHHHHHHHHHHHHHHhcCCcEEEEecCC
Q 010443 32 SRSVPML-EKLLRAGMNVARFNFSHGTH--------EYQQETLNNLRAAMHNTQILCAVMLDTK 86 (510)
Q Consensus 32 ~~~~~~l-~~li~~G~~~~RiN~sh~~~--------~~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 86 (510)
....+.+ +.|-+.|+|++|+-++.... +...+.++.+=+.+++.|. .+++|+-
T Consensus 65 ~~~~~di~~~l~~~G~N~VRl~v~w~~~~p~~g~~~~~~l~~l~~~v~~a~~~Gi--~vildlH 126 (481)
T 2osx_A 65 QFTEADLAREYADMGTNFVRFLISWRSVEPAPGVYDQQYLDRVEDRVGWYAERGY--KVMLDMH 126 (481)
T ss_dssp SCCHHHHHHHHHHHCCCEEEEEECHHHHCSBTTBCCHHHHHHHHHHHHHHHHTTC--EEEEEEC
T ss_pred cccHHHHHHHHHHCCCCEEEEeCcHHHcCCCCCCcCHHHHHHHHHHHHHHHHCCC--EEEEEcc
Confidence 4567888 89999999999998863211 1222333333333455664 5677754
No 423
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=28.25 E-value=81 Score=28.94 Aligned_cols=80 Identities=11% Similarity=-0.001 Sum_probs=46.0
Q ss_pred hccCcCCCCEEEEcCCC--------CHHHHHHHHHHhccCCCCceEEE--EecCHHHHhchHHHHhh-cCeeEEeCCccc
Q 010443 200 RWGVPNNIDMIALSFVR--------KGSDLVNVRKVLGPHAKNIQLMS--KVENQEGVVNFDDILRE-TDSFMVARGDLG 268 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~--------sa~dv~~vr~~l~~~~~~~~Iia--kIEt~~av~nldeI~~~-~DgI~IgrgDLg 268 (510)
+.+.+.|+|+|.+.-+. +.+.++++++.. ++.+++ =|.+. +|+.+.++. +||+++|++=+.
T Consensus 161 ~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~-----~~pvia~GGi~~~---~~~~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 161 KEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSV-----RIPVIASGGAGRV---EHFYEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp HHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHC-----SSCEEEESCCCSH---HHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhc-----CCCEEEeCCCCCH---HHHHHHHHcCCcHHHHHHHHHc
Confidence 55677899999874433 334555555543 345554 23332 455555554 899999986544
Q ss_pred CCCCchhHHHHHHHHHHHHHHcCCCe
Q 010443 269 MEIPVEKIFLAQKMMIYKCNLVGKPV 294 (510)
Q Consensus 269 ~e~~~~~v~~~qk~ii~~~~~~gkpv 294 (510)
...++ +++.+..+++|.++
T Consensus 233 ~~~~~-------~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 233 RVLSI-------AQVKRYLKERGVEV 251 (253)
T ss_dssp TSSCH-------HHHHHHHHHTTCBC
T ss_pred CCCCH-------HHHHHHHHHcCCCC
Confidence 43332 33444456666654
No 424
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=28.23 E-value=1.1e+02 Score=31.06 Aligned_cols=91 Identities=14% Similarity=0.153 Sum_probs=0.0
Q ss_pred HHHHHHHHHhccCCCCceEEEE-ecCHHHHhchHHHHhh-cCeeEEeCCcccCCC-----------------CchhHHHH
Q 010443 219 SDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRE-TDSFMVARGDLGMEI-----------------PVEKIFLA 279 (510)
Q Consensus 219 ~dv~~vr~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-~DgI~IgrgDLg~e~-----------------~~~~v~~~ 279 (510)
+.++.+++.. +++|++| +-.-...+.+....++ +|+|.++=. -|..+ +.+....+
T Consensus 196 ~~I~~l~~~~-----~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~-GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L 269 (365)
T 3sr7_A 196 KHLSDYAKKL-----QLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGR-GGTSFAYIENRRGGNRSYLNQWGQTTAQVL 269 (365)
T ss_dssp HHHHHHHHHC-----CSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCB-C--------------CGGGTTCSCBHHHHH
T ss_pred HHHHHHHHhh-----CCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCC-CCcccchhhccccccccccccccccHHHHH
Q ss_pred HHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 280 QKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 280 qk~ii~~~~~~--gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
. .++.. ..|+|.+..+- --.|++.++..|||++++.
T Consensus 270 ~-----~v~~~~~~ipvia~GGI~------------~g~Dv~KaLalGAdaV~ig 307 (365)
T 3sr7_A 270 L-----NAQPLMDKVEILASGGIR------------HPLDIIKALVLGAKAVGLS 307 (365)
T ss_dssp H-----HHGGGTTTSEEEECSSCC------------SHHHHHHHHHHTCSEEEES
T ss_pred H-----HHHHhcCCCeEEEeCCCC------------CHHHHHHHHHcCCCEEEEC
No 425
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=28.21 E-value=1.9e+02 Score=27.07 Aligned_cols=34 Identities=21% Similarity=0.302 Sum_probs=26.6
Q ss_pred HHHhcCCcEEEEEcCC---------chHHHHHHhhCCCCcEEEE
Q 010443 389 TANKARAKLIVVLTRG---------GTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 389 ~A~~~~a~aIvv~T~s---------G~tA~~iSr~RP~~PIiav 423 (510)
.+...+++.||+-++. |.++..+.+.-| |||+.+
T Consensus 118 ~a~~~~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~-~PVlvv 160 (294)
T 3loq_A 118 IKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSK-VPVYIF 160 (294)
T ss_dssp HHHHTTSSEEEEECCCCCHHHHHHHCCHHHHHHHHCS-SCEEEE
T ss_pred eeccCCCCEEEEcCCCCccccceeeccHHHHHHhcCC-CCEEEe
Confidence 7888999988887753 455667777766 999999
No 426
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=28.15 E-value=1.7e+02 Score=26.98 Aligned_cols=99 Identities=11% Similarity=0.145 Sum_probs=56.3
Q ss_pred cHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEe-----c----CHHHHhchHHHHhhcCeeEEeC
Q 010443 194 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV-----E----NQEGVVNFDDILRETDSFMVAR 264 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakI-----E----t~~av~nldeI~~~~DgI~Igr 264 (510)
|.+.+.+.+.+.|++.++++-+ +.++.+.+.++.+... + +++-+ + +.+.++.+++.++..-. +|=
T Consensus 20 ~~~~~l~~~~~~Gv~~~v~~~~-~~~~~~~~~~l~~~~~-~--i~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~--~~i 93 (264)
T 1xwy_A 20 DRDDVVACAFDAGVNGLLITGT-NLRESQQAQKLARQYS-S--CWSTAGVHPHDSSQWQAATEEAIIELAAQPEV--VAI 93 (264)
T ss_dssp THHHHHHHHHHTTCCEEEECCC-SHHHHHHHHHHHHHST-T--EEEEECCCGGGGGGCCHHHHHHHHHHHTSTTE--EEE
T ss_pred CHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHhCC-C--EEEEEEECCcccccCCHHHHHHHHHHhcCCCe--EEE
Confidence 4444446677899998776643 5777777777665432 2 22222 1 12344555555542222 334
Q ss_pred CcccCCCCch-hHHHHH----HHHHHHHHHcCCCeEEeh
Q 010443 265 GDLGMEIPVE-KIFLAQ----KMMIYKCNLVGKPVVTAT 298 (510)
Q Consensus 265 gDLg~e~~~~-~v~~~q----k~ii~~~~~~gkpvivaT 298 (510)
|..|.+.... .-...| +..++.|++.|+|+++-|
T Consensus 94 GE~Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~ 132 (264)
T 1xwy_A 94 GECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHC 132 (264)
T ss_dssp EEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEeccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEc
Confidence 5666665321 012333 467889999999999865
No 427
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=28.10 E-value=90 Score=33.34 Aligned_cols=68 Identities=7% Similarity=-0.094 Sum_probs=50.6
Q ss_pred HHHHHHHHhccCCCCceEEEEecCHHHH-hchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 220 DLVNVRKVLGPHAKNIQLMSKVENQEGV-VNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 220 dv~~vr~~l~~~~~~~~IiakIEt~~av-~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
-+..+++.+.+.|.++.+.+--+....+ +|.+++++-.|.|+.+-.+ +..+..+-+.|+++|+|.|.+
T Consensus 87 Ka~~a~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~----------~~~r~~ln~~c~~~~iplI~~ 155 (531)
T 1tt5_A 87 RAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLP----------ESTSLRLADVLWNSQIPLLIC 155 (531)
T ss_dssp HHHHHHHHHHTTCTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCC----------HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCC----------HHHHHHHHHHHHHcCCCEEEE
Confidence 4556677788888888877776666554 4667778778998887322 236778889999999999876
No 428
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=28.09 E-value=1.2e+02 Score=29.61 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=26.1
Q ss_pred HHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEE
Q 010443 389 TANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 389 ~A~~~~a~aIvv~T~sG~tA~~iSr~RP~~PIiav 423 (510)
+..+.+|.+||+--..-..++.+++-= ++|++.+
T Consensus 169 a~~eAGA~~ivlE~vp~~~a~~it~~l-~iP~igI 202 (275)
T 1o66_A 169 AHDDAGAAVVLMECVLAELAKKVTETV-SCPTIGI 202 (275)
T ss_dssp HHHHTTCSEEEEESCCHHHHHHHHHHC-SSCEEEE
T ss_pred HHHHcCCcEEEEecCCHHHHHHHHHhC-CCCEEEE
Confidence 344579999999776656688887765 4999998
No 429
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=27.78 E-value=2.1e+02 Score=28.30 Aligned_cols=116 Identities=15% Similarity=0.161 Sum_probs=66.7
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+.+|.|+.+. .|..+....+...-..|++.+..... .....+.........+.+..++.
T Consensus 101 alA~~aa~~G~~~~Iv-----------mP~~~~~~k~~~~~~~GA~Vv~v~~~----~~~~~~~~~~~~~~~~~~~~~~~ 165 (344)
T 3vc3_A 101 SMAFMAAMKGYKMVLT-----------MPSYTSLERRVTMRAFGAELILTDPA----KGMGGTVKKAYELLENTPNAHML 165 (344)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGG----GHHHHHHHHHHHHHHHSTTEECC
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCChHHHHHHHHHcCCEEEEECCC----CcchHHHHHHHHHHhhccCceec
Confidence 3567789999999774 25555555666777789998765322 11222333333322222222111
Q ss_pred HHHHHHHHhcCCCCCCchHHHH---HHHHHHHHhc--CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPLESLA---SSAVRTANKA--RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~ia---~~av~~A~~~--~a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
.+ | .++...++ ..+.++.+++ ..+++|+..-+|.++.-+++ .+|.+.|+++
T Consensus 166 ~~-~----------~np~~~~a~~~t~g~EI~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigV 225 (344)
T 3vc3_A 166 QQ-F----------SNPANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGV 225 (344)
T ss_dssp CT-T----------TCHHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred cc-c----------ccchhHHHHHHHHHHHHHHHhCCCceEEEEecCCccchHHHhhhhHhhCCCceEEEE
Confidence 10 0 12222222 2455666666 46889999999988655544 6899999999
No 430
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=27.69 E-value=69 Score=32.41 Aligned_cols=50 Identities=12% Similarity=0.014 Sum_probs=33.6
Q ss_pred EecCHHHHhchHHHHh--hcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010443 240 KVENQEGVVNFDDILR--ETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 296 (510)
Q Consensus 240 kIEt~~av~nldeI~~--~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviv 296 (510)
-=|+......+.++++ .+|+|++.++-+|- ..--.+|...|+++|.++.+
T Consensus 242 ~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GG-------it~~~~ia~~A~~~g~~~~~ 293 (378)
T 3eez_A 242 VDECLVTLQDAARVARDGLAEVFGIKLNRVGG-------LTRAARMRDIALTHGIDMFV 293 (378)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTS-------HHHHHHHHHHHHHTTCEEEE
T ss_pred ECCCCCCHHHHHHHHHcCCCCEEEeCchhcCC-------HHHHHHHHHHHHHcCCEEEc
Confidence 3455555566666664 37999987654432 23346788899999999876
No 431
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=27.63 E-value=2.7e+02 Score=26.99 Aligned_cols=106 Identities=11% Similarity=0.162 Sum_probs=62.3
Q ss_pred HHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhh
Q 010443 221 LVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQM 300 (510)
Q Consensus 221 v~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqm 300 (510)
++.++++..+. .+.+++-+=.+..++-+.+ .+|.+-||.+++- ..+ +++++.+.||||++.|.|
T Consensus 75 l~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~---~~d~~kIga~~~~------n~~-----ll~~~a~~~kPV~lk~G~ 138 (280)
T 2qkf_A 75 LKIFEKVKAEF--GIPVITDVHEPHQCQPVAE---VCDVIQLPAFLAR------QTD-----LVVAMAKTGNVVNIKKPQ 138 (280)
T ss_dssp HHHHHHHHHHH--CCCEEEECCSGGGHHHHHH---HCSEEEECGGGTT------BHH-----HHHHHHHTCCEEEEECCT
T ss_pred HHHHHHHHHHc--CCcEEEecCCHHHHHHHHh---hCCEEEECccccc------CHH-----HHHHHHcCCCcEEEECCC
Confidence 33444444332 4677777766666665555 4799999965553 222 555566889999997765
Q ss_pred hHhhhcCCCCChHhHHHHHHHHH-cCCceEEeccCCCCCCCHH-----HHHHHHHH
Q 010443 301 LESMIKSPRPTRAEATDVANAVL-DGTDCVMLSGESAAGAYPE-----IAVKIMRR 350 (510)
Q Consensus 301 LeSM~~~~~PtraEv~Dv~~av~-~G~D~imLs~Eta~G~yP~-----~~V~~m~~ 350 (510)
- -|-.|+...+..+. .|.+-++|-.-+..-.|+. .++..|++
T Consensus 139 ~--------~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~~~~~~~~dl~~i~~lk~ 186 (280)
T 2qkf_A 139 F--------LSPSQMKNIVEKFHEAGNGKLILCERGSSFGYDNLVVDMLGFGVMKQ 186 (280)
T ss_dssp T--------SCGGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHH
T ss_pred C--------CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHH
Confidence 3 24457777676654 5765455533222225542 35555544
No 432
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=27.57 E-value=72 Score=31.00 Aligned_cols=47 Identities=19% Similarity=0.284 Sum_probs=36.6
Q ss_pred HHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 246 GVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 246 av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
+.+..+|+.+.+|++.|.-|-|. ++....+...++.++++|+|+++-
T Consensus 46 ~~~E~~e~~~~a~al~iNiGtl~-----~~~~~~m~~A~~~A~~~~~PvVLD 92 (265)
T 3hpd_A 46 AEEELEEMIRLADAVVINIGTLD-----SGWRRSMVKATEIANELGKPIVLD 92 (265)
T ss_dssp CTTTHHHHHHHCSEEEEECTTCC-----HHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHCCeEEEECCCCC-----hHHHHHHHHHHHHHHHcCCCEEEc
Confidence 34567889999999999877763 355566677788999999999863
No 433
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=27.55 E-value=1.4e+02 Score=29.39 Aligned_cols=117 Identities=14% Similarity=0.193 Sum_probs=0.0
Q ss_pred HHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCe---EE
Q 010443 221 LVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPV---VT 296 (510)
Q Consensus 221 v~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpv---iv 296 (510)
...++.+..+.+.++++......-...+.+.+-++. .+-+|+. |-++|+++=...-+++++.|++.|..| +-
T Consensus 67 ~~~v~~~A~~~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiD----gS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG 142 (288)
T 3q94_A 67 VAMVKALIEEMNITVPVAIHLDHGSSFEKCKEAIDAGFTSVMID----ASHHPFEENVETTKKVVEYAHARNVSVEAELG 142 (288)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEEEECSHHHHHHHHHHTCSEEEEC----CTTSCHHHHHHHHHHHHHHHHTTTCEEEEEES
T ss_pred HHHHHHHHHhcCCCCcEEEECCCCCCHHHHHHHHHcCCCeEEEe----CCCCCHHHHHHHHHHHHHHHHHcCCeEEEEee
Q ss_pred ehhhhHhhhcCCCCChHhHHHHHHHH-HcCCceEEeccCCCCCCCH
Q 010443 297 ATQMLESMIKSPRPTRAEATDVANAV-LDGTDCVMLSGESAAGAYP 341 (510)
Q Consensus 297 aTqmLeSM~~~~~PtraEv~Dv~~av-~~G~D~imLs~Eta~G~yP 341 (510)
.+.--|.-+.+..-....-.+...++ .-|+|++-.+-=|+.|.||
T Consensus 143 ~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~ 188 (288)
T 3q94_A 143 TVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVHGPYK 188 (288)
T ss_dssp BCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCBSSCCS
T ss_pred eeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcccCCcC
No 434
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=27.53 E-value=51 Score=32.85 Aligned_cols=47 Identities=9% Similarity=0.214 Sum_probs=35.1
Q ss_pred EEecCCCCCCHHHHHHHHHhC--CCeEEEeecCCCHHHHHHHHHHHHHH
Q 010443 25 VCTLGPASRSVPMLEKLLRAG--MNVARFNFSHGTHEYQQETLNNLRAA 71 (510)
Q Consensus 25 i~TiGp~~~~~~~l~~li~~G--~~~~RiN~sh~~~~~~~~~i~~ir~~ 71 (510)
.+-+|......+..+.++++| ++..-+|++||......+.|+.+|+.
T Consensus 98 ~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~ 146 (336)
T 1ypf_A 98 SISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKH 146 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 333565444567778899999 99999999999877777777777764
No 435
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=27.52 E-value=61 Score=33.16 Aligned_cols=52 Identities=17% Similarity=0.229 Sum_probs=34.6
Q ss_pred CHHHHHHHHHhCCCeEEEeecC-------CCH---HHHHHHHHHHHHHHHhcCCcEEEEecCCC
Q 010443 34 SVPMLEKLLRAGMNVARFNFSH-------GTH---EYQQETLNNLRAAMHNTQILCAVMLDTKG 87 (510)
Q Consensus 34 ~~~~l~~li~~G~~~~RiN~sh-------~~~---~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 87 (510)
+.+.++.|-+.|+|++||-++. +.+ ....+.++.+=+.+++.| +.+++|+-+
T Consensus 75 te~d~~~i~~~G~N~VRipi~~~~~~~~~~~py~~~~~l~~ld~vv~~a~~~G--i~VilDlH~ 136 (408)
T 1h4p_A 75 QEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNS--LKVWVDLHG 136 (408)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTT--CEEEEEEEE
T ss_pred CHHHHHHHHHCCCCEEEccCCHHHcccCCCCCCccccHHHHHHHHHHHHHHCC--CEEEEECCC
Confidence 4788999999999999998862 111 114445555555566666 457778763
No 436
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=27.48 E-value=70 Score=30.03 Aligned_cols=49 Identities=22% Similarity=0.262 Sum_probs=32.6
Q ss_pred HHHHHHHHHhCCCeEEEeec-CC----------------CHHHHHHHHHHHHHHHHhcCCcEEEEecC
Q 010443 35 VPMLEKLLRAGMNVARFNFS-HG----------------THEYQQETLNNLRAAMHNTQILCAVMLDT 85 (510)
Q Consensus 35 ~~~l~~li~~G~~~~RiN~s-h~----------------~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl 85 (510)
.+.|+.|-+.|+|++|+=++ ++ ..+.+.+.++.+=+.++++|. -+++|+
T Consensus 45 ~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi--~vil~~ 110 (351)
T 3vup_A 45 EPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNI--LVFPCL 110 (351)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTC--EEEEEE
T ss_pred HHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCC--eEEEEe
Confidence 34578899999999999442 11 113556666777677788885 455665
No 437
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=27.27 E-value=4.2e+02 Score=27.35 Aligned_cols=59 Identities=14% Similarity=0.042 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHcCCC---eEEehhhhHhhhcCCCCChHhHH----HHHHHHHcCCceEEeccC
Q 010443 276 IFLAQKMMIYKCNLVGKP---VVTATQMLESMIKSPRPTRAEAT----DVANAVLDGTDCVMLSGE 334 (510)
Q Consensus 276 v~~~qk~ii~~~~~~gkp---vivaTqmLeSM~~~~~PtraEv~----Dv~~av~~G~D~imLs~E 334 (510)
...+...+...|.+.+.| |++----..+...+-.|...++. .+..++..|+..||+.+-
T Consensus 61 ~~~~~~~v~~~A~~~~vP~~~VaLHlDHg~~~~w~~~~~~~am~~a~e~i~~aI~aGFtSVMiD~S 126 (420)
T 2fiq_A 61 PADFREFVFAIADKVGFARERIILGGDHLGPNCWQQENVDAAMEKSVELVKAYVRAGFSKIHLDAS 126 (420)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEEEEESSGGGTTSBHHHHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHHHHHHHHHHHcCcCcceEEEECCCCCCccccccchhhhhhhHHHHHHHHHHhCCCEEEECCC
Confidence 344556666677789999 77755555454444556666663 477799999999999644
No 438
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=27.23 E-value=2.3e+02 Score=28.54 Aligned_cols=76 Identities=9% Similarity=0.084 Sum_probs=48.2
Q ss_pred CcccccccccCCCCCCCCCeEEEEecCCCCCC----HHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCc
Q 010443 3 NIDIEGLLRDVPNDKRLPKTKIVCTLGPASRS----VPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQIL 78 (510)
Q Consensus 3 ~~~~~~~~~~~p~~~~~~~tkIi~TiGp~~~~----~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~ 78 (510)
+.-+.++|+.. .++....++.+....+ .+..+++.+.|.+.+.+.....+.++-.+.++.+|++. |.-
T Consensus 138 g~Pl~~LLGg~-----~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~G~~~~Kikvg~~~~~~d~~~v~avR~~~---G~~ 209 (388)
T 4h83_A 138 KMPLWKLWGGY-----RNELPMIAIGGYYGEPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAA---GDD 209 (388)
T ss_dssp TCBHHHHTTCS-----CSEEEEEEEECCTTCTTCSHHHHHHHHHHHTBSEEEEECSSSCHHHHHHHHHHHHHHH---CSS
T ss_pred CCChhhhcCCC-----cCceEEEeeccccCCCHHHHHHHHHHHHHcCCceEeecCCCCCHHHHHHHHHHHHHhc---CCC
Confidence 33455677742 2334455554433222 46677889999999999998778877667777777654 433
Q ss_pred EEEEecCC
Q 010443 79 CAVMLDTK 86 (510)
Q Consensus 79 v~i~~Dl~ 86 (510)
+.|++|-.
T Consensus 210 ~~l~vDaN 217 (388)
T 4h83_A 210 FIICIDAN 217 (388)
T ss_dssp SEEEEECT
T ss_pred eEEEEecC
Confidence 45555543
No 439
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=27.23 E-value=2.2e+02 Score=22.28 Aligned_cols=61 Identities=11% Similarity=0.250 Sum_probs=35.1
Q ss_pred HHHHHhcCCcEEEEE----cCCchH-HHHHHhhCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCC
Q 010443 387 VRTANKARAKLIVVL----TRGGTT-AKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEG 459 (510)
Q Consensus 387 v~~A~~~~a~aIvv~----T~sG~t-A~~iSr~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~ 459 (510)
.........+.+++= ..+|.. .+.+.+..|.+||++++ . ........-.+..|+.-++..+
T Consensus 40 ~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s------~------~~~~~~~~~~~~~ga~~~l~Kp 105 (126)
T 1dbw_A 40 LAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVIT------G------HGDVPMAVEAMKAGAVDFIEKP 105 (126)
T ss_dssp HHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEE------C------TTCHHHHHHHHHTTCSEEEESS
T ss_pred HHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEE------C------CCCHHHHHHHHHhCHHHheeCC
Confidence 334444456655553 235543 56676677999999992 1 2222222334456888888766
No 440
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=27.13 E-value=2.2e+02 Score=28.78 Aligned_cols=90 Identities=20% Similarity=0.329 Sum_probs=50.2
Q ss_pred CHHHHHHHHHHhccCCCCceEEEE-ecCHHHHhchHHHHhh-cCeeEEeC-CcccCCCC---chhHHHHHHHHHHHHHHc
Q 010443 217 KGSDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRE-TDSFMVAR-GDLGMEIP---VEKIFLAQKMMIYKCNLV 290 (510)
Q Consensus 217 sa~dv~~vr~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-~DgI~Igr-gDLg~e~~---~~~v~~~qk~ii~~~~~~ 290 (510)
+.+.++.+++.. ++.++.| +-|+ +.+....+. +|+|.++- |--..+-+ ++.++.+. ...
T Consensus 213 ~~~~i~~i~~~~-----~~Pv~vkgv~t~---e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~-------~~~ 277 (380)
T 1p4c_A 213 NWEALRWLRDLW-----PHKLLVKGLLSA---EDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSV-------AKT 277 (380)
T ss_dssp CHHHHHHHHHHC-----CSEEEEEEECCH---HHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHH-------HHH
T ss_pred cHHHHHHHHHhc-----CCCEEEEecCcH---HHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHH-------HHc
Confidence 467777777755 3567766 3332 233333333 79999941 11111111 22333222 234
Q ss_pred CCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 291 GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 291 gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
+.|+|...-+- -..|+..++..|+|++|+..
T Consensus 278 ~~pVia~GGI~------------~~~dv~kal~~GAdaV~iGr 308 (380)
T 1p4c_A 278 GKPVLIDSGFR------------RGSDIVKALALGAEAVLLGR 308 (380)
T ss_dssp CSCEEECSSCC------------SHHHHHHHHHTTCSCEEESH
T ss_pred CCeEEEECCCC------------CHHHHHHHHHhCCcHhhehH
Confidence 66988754322 24688899999999999974
No 441
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=27.13 E-value=1.2e+02 Score=30.60 Aligned_cols=65 Identities=14% Similarity=0.123 Sum_probs=41.3
Q ss_pred HHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHh--hcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010443 219 SDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR--ETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 296 (510)
Q Consensus 219 ~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~--~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviv 296 (510)
+...++++.. .+.|. -=|+......+.++++ .+|.+.+..+-+|- ..--.+|...|+++|.++.+
T Consensus 235 ~~~~~l~~~~-----~iPIa-~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GG-------it~~~~ia~~A~~~gi~~~~ 301 (383)
T 3i4k_A 235 ETLREITRRT-----NVSVM-ADESVWTPAEALAVVKAQAADVIALKTTKHGG-------LLESKKIAAIAEAGGLACHG 301 (383)
T ss_dssp HHHHHHHHHH-----CCEEE-ESTTCSSHHHHHHHHHHTCCSEEEECTTTTTS-------HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhhC-----CCCEE-ecCccCCHHHHHHHHHcCCCCEEEEcccccCC-------HHHHHHHHHHHHHcCCeEEe
Confidence 3444455443 24443 4477666777777775 47999987655543 12345788889999999865
No 442
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=27.12 E-value=2.6e+02 Score=26.99 Aligned_cols=91 Identities=14% Similarity=0.134 Sum_probs=54.4
Q ss_pred HHHHhh-cCeeEEeCCcc--cCCCCchhHHHHHHHHHHHHHHc---CCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHH
Q 010443 251 DDILRE-TDSFMVARGDL--GMEIPVEKIFLAQKMMIYKCNLV---GKPVVTATQMLESMIKSPRPTRAEATDVAN-AVL 323 (510)
Q Consensus 251 deI~~~-~DgI~IgrgDL--g~e~~~~~v~~~qk~ii~~~~~~---gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~ 323 (510)
+-.++. .||+++. |-- +..+..++- +++++.+.++ ..|+++-|- ..+-.|..+.+. |-.
T Consensus 31 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er----~~v~~~~~~~~~gr~pviaGvg---------~~~t~~ai~la~~A~~ 96 (294)
T 3b4u_A 31 RRCLSNGCDSVTLF-GTTGEGCSVGSRER----QAILSSFIAAGIAPSRIVTGVL---------VDSIEDAADQSAEALN 96 (294)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHH----HHHHHHHHHTTCCGGGEEEEEC---------CSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHH----HHHHHHHHHHhCCCCcEEEeCC---------CccHHHHHHHHHHHHh
Confidence 334443 7999885 221 123444443 3444444432 357775432 345566666555 566
Q ss_pred cCCceEEeccCCCCC-CCHHHHHHHHHHHHHHH
Q 010443 324 DGTDCVMLSGESAAG-AYPEIAVKIMRRICIEA 355 (510)
Q Consensus 324 ~G~D~imLs~Eta~G-~yP~~~V~~m~~i~~~a 355 (510)
.|+|++|+..=--.. .-+.+.++..+.|+..+
T Consensus 97 ~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 97 AGARNILLAPPSYFKNVSDDGLFAWFSAVFSKI 129 (294)
T ss_dssp TTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 799999997544333 34577888999999888
No 443
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=27.08 E-value=94 Score=31.45 Aligned_cols=70 Identities=14% Similarity=0.133 Sum_probs=41.0
Q ss_pred hccCcCCCCEEEEcC------------CCCHHHHHHHHHH----hccCCC-CceEEE--EecCHHHHhchHHHHhhcCee
Q 010443 200 RWGVPNNIDMIALSF------------VRKGSDLVNVRKV----LGPHAK-NIQLMS--KVENQEGVVNFDDILRETDSF 260 (510)
Q Consensus 200 ~~a~~~g~d~I~~sf------------V~sa~dv~~vr~~----l~~~~~-~~~Iia--kIEt~~av~nldeI~~~~DgI 260 (510)
+.+.+.|+|+|.++. +-+.+.+.++++. +.+.+. ++.||+ -|-|.+-+ +..++.-+|++
T Consensus 226 ~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv--~kalalGA~~V 303 (393)
T 2qr6_A 226 LHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDV--VKAIACGADAV 303 (393)
T ss_dssp HHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHH--HHHHHHTCSEE
T ss_pred HHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHH--HHHHHcCCCEE
Confidence 455689999999975 3334445555544 121222 377776 45444333 22333338999
Q ss_pred EEeCCcccCCC
Q 010443 261 MVARGDLGMEI 271 (510)
Q Consensus 261 ~IgrgDLg~e~ 271 (510)
++||.=|+..-
T Consensus 304 ~iG~~~l~~~e 314 (393)
T 2qr6_A 304 VLGSPLARAEE 314 (393)
T ss_dssp EECGGGGGSTT
T ss_pred EECHHHHcCCC
Confidence 99998766554
No 444
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=26.99 E-value=92 Score=30.90 Aligned_cols=80 Identities=15% Similarity=0.244 Sum_probs=48.8
Q ss_pred CCCceEEEEecCH------HHHhchHHHHhh-cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhh
Q 010443 232 AKNIQLMSKVENQ------EGVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESM 304 (510)
Q Consensus 232 ~~~~~IiakIEt~------~av~nldeI~~~-~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM 304 (510)
+.+..|+|+.|.. +++++.....++ +|+||+-- ++ . -..+-+.|++...|+++ +|++.
T Consensus 157 ~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~------~~--~----~~~~~~i~~~~~~P~~~--n~~~~- 221 (305)
T 3ih1_A 157 APSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEA------LQ--S----EEEFRLFNSKVNAPLLA--NMTEF- 221 (305)
T ss_dssp CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEETT------CC--S----HHHHHHHHHHSCSCBEE--ECCTT-
T ss_pred CCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEcC------CC--C----HHHHHHHHHHcCCCEEE--eecCC-
Confidence 4568899999886 566666666665 79999831 11 1 13344556677889864 33332
Q ss_pred hcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 305 IKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 305 ~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
-..|.+|.+|.. ..|+.-+...
T Consensus 222 g~tp~~~~~eL~------~lGv~~v~~~ 243 (305)
T 3ih1_A 222 GKTPYYSAEEFA------NMGFQMVIYP 243 (305)
T ss_dssp SSSCCCCHHHHH------HTTCSEEEEC
T ss_pred CCCCCCCHHHHH------HcCCCEEEEc
Confidence 123556665544 3588877654
No 445
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=26.96 E-value=4.3e+02 Score=25.70 Aligned_cols=89 Identities=11% Similarity=0.086 Sum_probs=53.5
Q ss_pred cCeeEEeCCccc--CCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEecc
Q 010443 257 TDSFMVARGDLG--MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 333 (510)
Q Consensus 257 ~DgI~IgrgDLg--~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~ 333 (510)
.||+++. |--| ..+..++-..+-+..++.++ -..||++-| ...+-+|..+.+. |-..|+|++|+..
T Consensus 43 v~gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~ 111 (309)
T 3fkr_A 43 SDGLCIL-ANFSEQFAITDDERDVLTRTILEHVA-GRVPVIVTT---------SHYSTQVCAARSLRAQQLGAAMVMAMP 111 (309)
T ss_dssp CSCEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEC-ccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCchHHHHHHHHHHHHHcCCCEEEEcC
Confidence 7999985 2211 23444444444444444432 247888643 2445566666554 6778999999974
Q ss_pred CCCC----CCCHHHHHHHHHHHHHHHhc
Q 010443 334 ESAA----GAYPEIAVKIMRRICIEAES 357 (510)
Q Consensus 334 Eta~----G~yP~~~V~~m~~i~~~aE~ 357 (510)
= .. ..-+.+.++..+.|+..+.-
T Consensus 112 P-yy~~~~~~s~~~l~~~f~~va~a~~l 138 (309)
T 3fkr_A 112 P-YHGATFRVPEAQIFEFYARVSDAIAI 138 (309)
T ss_dssp S-CBTTTBCCCHHHHHHHHHHHHHHCSS
T ss_pred C-CCccCCCCCHHHHHHHHHHHHHhcCC
Confidence 2 22 12257788888888887753
No 446
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=26.95 E-value=1.1e+02 Score=26.60 Aligned_cols=52 Identities=6% Similarity=0.054 Sum_probs=37.0
Q ss_pred HhchHHHHh--hcCeeEEe--CCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEeh
Q 010443 247 VVNFDDILR--ETDSFMVA--RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTAT 298 (510)
Q Consensus 247 v~nldeI~~--~~DgI~Ig--rgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaT 298 (510)
+..+++.+. ..|.|+|. --|+....+.+.+....+++++.++++|.++++.|
T Consensus 51 ~~~~~~~~~~~~pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~ 106 (190)
T 1ivn_A 51 LARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQ 106 (190)
T ss_dssp HHHHHHHHHHHCCSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 334444433 25766554 45887777788888888999999999988887754
No 447
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=26.94 E-value=81 Score=31.37 Aligned_cols=50 Identities=18% Similarity=0.156 Sum_probs=37.6
Q ss_pred EEEecCCCCCCHHHHHHHHHhCC-------------CeEEEeecCCCHHHHHHHHHHHHHHHHh
Q 010443 24 IVCTLGPASRSVPMLEKLLRAGM-------------NVARFNFSHGTHEYQQETLNNLRAAMHN 74 (510)
Q Consensus 24 Ii~TiGp~~~~~~~l~~li~~G~-------------~~~RiN~sh~~~~~~~~~i~~ir~~~~~ 74 (510)
+...+. ..+..+..+.|.+.|+ +.+||+|++.+.++..+.++.++++.++
T Consensus 374 ~~~~~~-~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 374 FTVGYK-GMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp EEEEET-TCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred EEEecC-CCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 334443 3345667777888875 6799999988999999999999987653
No 448
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=26.76 E-value=44 Score=32.88 Aligned_cols=63 Identities=14% Similarity=0.144 Sum_probs=46.3
Q ss_pred HHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHH--hchHHHHhh-cCeeEEeC
Q 010443 196 EDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGV--VNFDDILRE-TDSFMVAR 264 (510)
Q Consensus 196 ~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av--~nldeI~~~-~DgI~Igr 264 (510)
+.+ +-+++.|+|+|.+-.. ++++++++.+.++..+.++ +||=--|+ +|+.++++. .|+|.+|.
T Consensus 205 eea-~eal~aGaD~I~LDn~-~~~~~~~~v~~l~~~~~~v----~ieaSGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 205 EQL-DAVLPEKPELILLDNF-AVWQTQTAVQRRDSRAPTV----MLESSGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHH-HHHGGGCCSEEEEETC-CHHHHHHHHHHHHHHCTTC----EEEEESSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHH-HHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCe----EEEEECCCCHHHHHHHHhcCCCEEEECH
Confidence 344 4567789999999885 7889998888887533343 45444454 688888887 89999985
No 449
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=26.65 E-value=1.5e+02 Score=24.40 Aligned_cols=62 Identities=8% Similarity=0.117 Sum_probs=37.8
Q ss_pred HHHHHHhcCCcEEEEEc----CCchH-HHHHHhhCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCC
Q 010443 386 AVRTANKARAKLIVVLT----RGGTT-AKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEG 459 (510)
Q Consensus 386 av~~A~~~~a~aIvv~T----~sG~t-A~~iSr~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~ 459 (510)
|.+.......+.|++-. .+|.. .+.+.+..|.+||++++ + ........-.+..|+.-++..+
T Consensus 58 al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls------~------~~~~~~~~~~~~~g~~~~l~Kp 124 (150)
T 4e7p_A 58 AIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVT------T------FKRAGYFERAVKAGVDAYVLKE 124 (150)
T ss_dssp HHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEE------S------CCCHHHHHHHHHTTCSEEEETT
T ss_pred HHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEe------C------CCCHHHHHHHHHCCCcEEEecC
Confidence 34445556678766643 34443 56676778999999992 2 2222223334567888888766
No 450
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=26.63 E-value=1.4e+02 Score=28.29 Aligned_cols=67 Identities=15% Similarity=0.212 Sum_probs=45.1
Q ss_pred HHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 220 DLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 220 dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
.++.+++.+.+.+.++.+.+.-+... -+|++++++-.|.|+-+-.++ ..+..+-+.|+++++|.+.+
T Consensus 83 Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~~----------~~r~~l~~~~~~~~~p~i~~ 149 (251)
T 1zud_1 83 KSQVSQQRLTQLNPDIQLTALQQRLT-GEALKDAVARADVVLDCTDNM----------ATRQEINAACVALNTPLITA 149 (251)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHHCSEEEECCSSH----------HHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccCC-HHHHHHHHhcCCEEEECCCCH----------HHHHHHHHHHHHhCCCEEEE
Confidence 34555666666666776665443322 257888888889888763322 35678889999999998865
No 451
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=26.57 E-value=3.5e+02 Score=26.49 Aligned_cols=146 Identities=14% Similarity=0.084 Sum_probs=78.1
Q ss_pred cCeeEEeCCccc--CCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-HHHcCCceEEecc
Q 010443 257 TDSFMVARGDLG--MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 333 (510)
Q Consensus 257 ~DgI~IgrgDLg--~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~-av~~G~D~imLs~ 333 (510)
+||+++. |--| ..+..++-..+.+..++.++. ..||++-| ...+-+|..+.+. |-..|+|++|+..
T Consensus 57 v~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGv---------g~~st~~ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 57 INGVSPV-GTTGESPTLTHEEHKRIIELCVEQVAK-RVPVVAGA---------GSNSTSEAVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp CSEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEeC-ccccCccccCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 6999875 2211 233444444444444444432 47888643 2455666666555 6678999999975
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcc-cchHHHHHHHHhcCCCCCCchHHHHHHHHHHHHhc-CCcEEEEEcC-CchHHHH
Q 010443 334 ESAAGAYPEIAVKIMRRICIEAESS-LDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKA-RAKLIVVLTR-GGTTAKL 410 (510)
Q Consensus 334 Eta~G~yP~~~V~~m~~i~~~aE~~-~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~-~a~aIvv~T~-sG~tA~~ 410 (510)
=--...-+.+.++..+.|+..+.-- +-|.. ... . ....+ .+.+ .++|.+. +..+|=--+. -.+..+.
T Consensus 126 P~y~~~~~~~l~~~f~~va~a~~lPiilYn~--P~~-t--g~~l~-~~~~----~~La~~~pnIvgiKdssgd~~~~~~l 195 (315)
T 3si9_A 126 PYYNRPNQRGLYTHFSSIAKAISIPIIIYNI--PSR-S--VIDMA-VETM----RDLCRDFKNIIGVKDATGKIERASEQ 195 (315)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEEEC--HHH-H--SCCCC-HHHH----HHHHHHCTTEEEEEECSCCTHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCEEEEeC--chh-h--CCCCC-HHHH----HHHHhhCCCEEEEEeCCCCHHHHHHH
Confidence 4433334567888888888887532 22211 100 1 11222 2332 3455422 3333222111 1345666
Q ss_pred HHhhCCCCcEEEE
Q 010443 411 VAKYRPAVPILSV 423 (510)
Q Consensus 411 iSr~RP~~PIiav 423 (510)
+...+|...|+.-
T Consensus 196 ~~~~~~~f~v~~G 208 (315)
T 3si9_A 196 REKCGKDFVQLSG 208 (315)
T ss_dssp HHHHCSSSEEEES
T ss_pred HHHcCCCeEEEec
Confidence 7777788888776
No 452
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=26.55 E-value=56 Score=33.23 Aligned_cols=75 Identities=17% Similarity=0.246 Sum_probs=45.5
Q ss_pred cccccccccCCCCCCCCCeEEEEecCCC--CCCHHH----HHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCC
Q 010443 4 IDIEGLLRDVPNDKRLPKTKIVCTLGPA--SRSVPM----LEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQI 77 (510)
Q Consensus 4 ~~~~~~~~~~p~~~~~~~tkIi~TiGp~--~~~~~~----l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~ 77 (510)
.-+.++|+.... .+...-+|+|.- ..+++. .+++++.|.+.+.+++.+ +.++-.+.++.+|++. |.
T Consensus 114 ~Pl~~LLGg~~r----~~v~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~-~~~~d~~~v~avR~a~---g~ 185 (391)
T 3gd6_A 114 ISVSDFLGGRVK----EKIKVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK-NLDADEEFLSRVKEEF---GS 185 (391)
T ss_dssp SBHHHHTTCCSC----SEEEBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS-CHHHHHHHHHHHHHHH---GG
T ss_pred CcHHHHhCCCcC----CeEEeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC-CHHHHHHHHHHHHHHc---CC
Confidence 345567774322 234556787721 223443 456788999999999987 6666666777777654 33
Q ss_pred cEEEE-ecCC
Q 010443 78 LCAVM-LDTK 86 (510)
Q Consensus 78 ~v~i~-~Dl~ 86 (510)
-+.|+ +|..
T Consensus 186 ~~~l~~vDan 195 (391)
T 3gd6_A 186 RVRIKSYDFS 195 (391)
T ss_dssp GCEEEEEECT
T ss_pred CCcEEEecCC
Confidence 34555 6653
No 453
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=26.54 E-value=2.9e+02 Score=26.14 Aligned_cols=105 Identities=15% Similarity=0.131 Sum_probs=69.8
Q ss_pred HHHHhccCcCCCCEEEE-----cCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHh---h-cCeeEEeCCc
Q 010443 196 EDILRWGVPNNIDMIAL-----SFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR---E-TDSFMVARGD 266 (510)
Q Consensus 196 ~di~~~a~~~g~d~I~~-----sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~---~-~DgI~IgrgD 266 (510)
.++.+...+.|++.|.+ -|-.+.++++.+++.. +++++.| ..+-+-.+|.. . +|+|.++-.+
T Consensus 68 ~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v-----~lPvl~k----dfI~d~~qi~~a~~~GAD~VlL~~~~ 138 (254)
T 1vc4_A 68 VEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAV-----DLPLLRK----DFVVDPFMLEEARAFGASAALLIVAL 138 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHC-----CSCEEEE----SCCCSHHHHHHHHHTTCSEEEEEHHH
T ss_pred HHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHhc-----CCCEEEC----CcCCCHHHHHHHHHcCCCEEEECccc
Confidence 34435557889999988 3445999999999854 4555543 34444444433 2 7999998766
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEec
Q 010443 267 LGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 332 (510)
Q Consensus 267 Lg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs 332 (510)
|. ..-++++..++..|.-+.+.++ +..|. ..+...|+|.+-++
T Consensus 139 l~---------~~l~~l~~~a~~lGl~~lvev~-----------~~~E~---~~a~~~gad~IGvn 181 (254)
T 1vc4_A 139 LG---------ELTGAYLEEARRLGLEALVEVH-----------TEREL---EIALEAGAEVLGIN 181 (254)
T ss_dssp HG---------GGHHHHHHHHHHHTCEEEEEEC-----------SHHHH---HHHHHHTCSEEEEE
T ss_pred hH---------HHHHHHHHHHHHCCCeEEEEEC-----------CHHHH---HHHHHcCCCEEEEc
Confidence 63 1245677788889988776543 33444 46777899987665
No 454
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=26.30 E-value=4.4e+02 Score=25.33 Aligned_cols=137 Identities=12% Similarity=0.081 Sum_probs=76.1
Q ss_pred CCccccCCCCChhcHH-HHHhccCcCCCCEEEE--cC---CCCHHHHHHHHHHhccCCCCceEEEEecCHH---------
Q 010443 181 PGVVVDLPTLTEKDKE-DILRWGVPNNIDMIAL--SF---VRKGSDLVNVRKVLGPHAKNIQLMSKVENQE--------- 245 (510)
Q Consensus 181 p~~~~~lp~lt~~D~~-di~~~a~~~g~d~I~~--sf---V~sa~dv~~vr~~l~~~~~~~~IiakIEt~~--------- 245 (510)
|-..+++..-+..+.. ++ +.+...|+|.|=+ =+ ....+++.++-..+++.-.+.+||.-+-|..
T Consensus 40 p~i~v~l~~~~~~e~~~~~-~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~ 118 (276)
T 3o1n_A 40 PKIIVSLMGKTITDVKSEA-LAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTT 118 (276)
T ss_dssp CEEEEEECCSSHHHHHHHH-HHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCH
T ss_pred cEEEEEeCCCCHHHHHHHH-HHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCH
Confidence 3444444433444322 23 3344578887643 33 3344555554444443323567887775522
Q ss_pred --HHhchHHHHhh--cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHH-
Q 010443 246 --GVVNFDDILRE--TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN- 320 (510)
Q Consensus 246 --av~nldeI~~~--~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~- 320 (510)
-++-+...++. +|.|=| |+..+ ....+++++.+++.|..+|.+-+-+ ...|+..|+...++
T Consensus 119 ~~~~~ll~~~l~~g~~dyIDv-------El~~~--~~~~~~l~~~a~~~~~kvI~S~Hdf-----~~tP~~~el~~~~~~ 184 (276)
T 3o1n_A 119 GQYIDLNRAAVDSGLVDMIDL-------ELFTG--DDEVKATVGYAHQHNVAVIMSNHDF-----HKTPAAEEIVQRLRK 184 (276)
T ss_dssp HHHHHHHHHHHHHTCCSEEEE-------EGGGC--HHHHHHHHHHHHHTTCEEEEEEEES-----SCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEE-------ECcCC--HHHHHHHHHHHHhCCCEEEEEeecC-----CCCcCHHHHHHHHHH
Confidence 22233333332 355433 33222 2577888999999999999865533 45678888876655
Q ss_pred HHHcCCceEEec
Q 010443 321 AVLDGTDCVMLS 332 (510)
Q Consensus 321 av~~G~D~imLs 332 (510)
+...|+|-+=+.
T Consensus 185 ~~~~GaDIvKia 196 (276)
T 3o1n_A 185 MQELGADIPKIA 196 (276)
T ss_dssp HHHTTCSEEEEE
T ss_pred HHHcCCCEEEEE
Confidence 567799976553
No 455
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=26.16 E-value=71 Score=30.43 Aligned_cols=57 Identities=7% Similarity=0.021 Sum_probs=39.3
Q ss_pred EEEEecCCC--CCCHHHHHHHHHhCCCeEEEeecCCCH-HHHHHHHHHHHHHHHhcCCcEEEEe
Q 010443 23 KIVCTLGPA--SRSVPMLEKLLRAGMNVARFNFSHGTH-EYQQETLNNLRAAMHNTQILCAVML 83 (510)
Q Consensus 23 kIi~TiGp~--~~~~~~l~~li~~G~~~~RiN~sh~~~-~~~~~~i~~ir~~~~~~~~~v~i~~ 83 (510)
+...|.|-. ..+.+.++.|.++|+|.+=+-.|+|.. +...++++.+|+ +..|+.+|.
T Consensus 9 ~~~it~gDP~~~~t~~~~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir~----~~~Pivl~~ 68 (234)
T 2f6u_A 9 WRHITKLDPDRTNTDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQ----YGLPIVVEP 68 (234)
T ss_dssp CCEEEEECTTSCCCHHHHHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHTT----SCCCEEECC
T ss_pred ceEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhcC----CCCCEEEec
Confidence 334455543 357899999999999999999999854 445555555553 566665543
No 456
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=26.06 E-value=1e+02 Score=30.89 Aligned_cols=50 Identities=8% Similarity=0.173 Sum_probs=36.7
Q ss_pred EEEecCC-CCCCHHHHHHHHHhCC---------------------CeEEEeecCCCHHHHHHHHHHHHHHHHh
Q 010443 24 IVCTLGP-ASRSVPMLEKLLRAGM---------------------NVARFNFSHGTHEYQQETLNNLRAAMHN 74 (510)
Q Consensus 24 Ii~TiGp-~~~~~~~l~~li~~G~---------------------~~~RiN~sh~~~~~~~~~i~~ir~~~~~ 74 (510)
+...+.+ ..+..+..+.|.+.|+ +.+||+|++ +.++..+.++.++++.++
T Consensus 368 ~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~ 439 (444)
T 3if2_A 368 LWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVVRE 439 (444)
T ss_dssp EEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHHHH
Confidence 3445543 2345566677777775 468999999 999999999999988764
No 457
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=25.90 E-value=70 Score=31.10 Aligned_cols=35 Identities=14% Similarity=0.270 Sum_probs=28.6
Q ss_pred EecCCCCCCHHHHHHHHHhC--CCeEEEeecCCCHHH
Q 010443 26 CTLGPASRSVPMLEKLLRAG--MNVARFNFSHGTHEY 60 (510)
Q Consensus 26 ~TiGp~~~~~~~l~~li~~G--~~~~RiN~sh~~~~~ 60 (510)
.|.-|..-+.+.++.|.++| ++-+-|.+-+++.+.
T Consensus 92 ~~~~p~~l~~e~l~~l~~~g~~~~~l~i~lqs~s~~v 128 (304)
T 2qgq_A 92 MYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKI 128 (304)
T ss_dssp CCCCGGGCCHHHHHHHHHCTTBCCEEECCCBCSCHHH
T ss_pred eeeecccCCHHHHHHHHhCCCCccEEEEecccCCHHH
Confidence 56778888999999999999 777777777877554
No 458
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=25.80 E-value=3.5e+02 Score=27.39 Aligned_cols=54 Identities=15% Similarity=0.208 Sum_probs=35.0
Q ss_pred ceEEEEecCHHHHhchHHHHhh--cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEE
Q 010443 235 IQLMSKVENQEGVVNFDDILRE--TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 296 (510)
Q Consensus 235 ~~IiakIEt~~av~nldeI~~~--~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpviv 296 (510)
+.| +-=|+......+.++++. +|.+.+..+-.| |+ .--++|...|+++|.++..
T Consensus 260 iPI-a~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~G---Gi----t~~~~ia~~A~~~gi~~~~ 315 (404)
T 4e5t_A 260 IPV-ATGERLCTKYEFSRVLETGAASILQMNLGRVG---GL----LEAKKIAAMAECHSAQIAP 315 (404)
T ss_dssp SCE-EECTTCCHHHHHHHHHHHTCCSEECCCTTTSS---CH----HHHHHHHHHHHHTTCEECC
T ss_pred CCE-EeCCCcCCHHHHHHHHHhCCCCEEecCccccC---CH----HHHHHHHHHHHHcCCEEee
Confidence 443 445777777777777663 688887544333 22 2236788899999999753
No 459
>4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A*
Probab=25.75 E-value=1.4e+02 Score=30.28 Aligned_cols=54 Identities=15% Similarity=0.183 Sum_probs=38.9
Q ss_pred cCCC-CCCHHHHH----HHHHhCCCeEEEeecCCCHHHHH-HHHHHHHHHHHhcCCcEEEE
Q 010443 28 LGPA-SRSVPMLE----KLLRAGMNVARFNFSHGTHEYQQ-ETLNNLRAAMHNTQILCAVM 82 (510)
Q Consensus 28 iGp~-~~~~~~l~----~li~~G~~~~RiN~sh~~~~~~~-~~i~~ir~~~~~~~~~v~i~ 82 (510)
+|+- +.++++++ .|-++|+++|=+|.-..+ +... +.++++.+++++.+..+.+.
T Consensus 95 lG~Yss~d~~v~~~h~~~Ak~aGIDgf~l~w~~~~-~~~d~~~l~~~l~aA~~~~~k~~f~ 154 (380)
T 4ad1_A 95 LGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEQ-DETEAKRIGLILDAADKKKIKVCFH 154 (380)
T ss_dssp TCSCCTTCHHHHHHHHHHHHHHTEEEEEEEECCCC-SHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cccccCCCHHHHHHHHHHHHHcCCCEEEEEecCCC-CcccHHHHHHHHHHHHHcCCeEEEE
Confidence 5774 45666554 499999999999975322 2334 78889999999888877643
No 460
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=25.65 E-value=1.7e+02 Score=23.01 Aligned_cols=63 Identities=16% Similarity=0.186 Sum_probs=36.4
Q ss_pred HHHHHHHhcCCcEEEEEcC----CchH-HHHHHhhCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCC
Q 010443 385 SAVRTANKARAKLIVVLTR----GGTT-AKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEG 459 (510)
Q Consensus 385 ~av~~A~~~~a~aIvv~T~----sG~t-A~~iSr~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~ 459 (510)
.|.+.......+.|++--. +|.. .+.+ |.++..||++++. .+......-.+..|+.-++..+
T Consensus 37 ~al~~~~~~~~dlii~D~~~p~~~g~~~~~~l-r~~~~~~ii~~t~------------~~~~~~~~~~~~~ga~~~l~KP 103 (120)
T 3f6p_A 37 EAVEMVEELQPDLILLDIMLPNKDGVEVCREV-RKKYDMPIIMLTA------------KDSEIDKVIGLEIGADDYVTKP 103 (120)
T ss_dssp HHHHHHHTTCCSEEEEETTSTTTHHHHHHHHH-HTTCCSCEEEEEE------------SSCHHHHHHHHHTTCCEEEEES
T ss_pred HHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHH-HhcCCCCEEEEEC------------CCChHHHHHHHhCCcceeEcCC
Confidence 3444555667787766432 3433 3334 3456899999932 2333333345677888888766
Q ss_pred C
Q 010443 460 S 460 (510)
Q Consensus 460 ~ 460 (510)
.
T Consensus 104 ~ 104 (120)
T 3f6p_A 104 F 104 (120)
T ss_dssp C
T ss_pred C
Confidence 3
No 461
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=25.59 E-value=1.1e+02 Score=31.01 Aligned_cols=74 Identities=14% Similarity=0.117 Sum_probs=47.9
Q ss_pred cccccccccCCCCCCCCCeEEEEecCCCCC-CHH----HHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCc
Q 010443 4 IDIEGLLRDVPNDKRLPKTKIVCTLGPASR-SVP----MLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQIL 78 (510)
Q Consensus 4 ~~~~~~~~~~p~~~~~~~tkIi~TiGp~~~-~~~----~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~ 78 (510)
.-+-++|+.. ..+....+|+|-... +++ ..+++.++|.+.+.+...|++.++-.+.++.+|++. |.-
T Consensus 149 ~Pl~~lLGg~-----~~~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~av---G~d 220 (398)
T 2pp0_A 149 LPLAKLLGAH-----RDSVQCYNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREAL---GDE 220 (398)
T ss_dssp SBHHHHHCCS-----CSEEEEEECTTSCTTSCHHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHH---CSS
T ss_pred CcHHHHhCCC-----CCCeeEEEecCCcCCCCHHHHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHc---CCC
Confidence 3345566643 134566777654312 444 456678899999999999888888788888888865 322
Q ss_pred EEEEecC
Q 010443 79 CAVMLDT 85 (510)
Q Consensus 79 v~i~~Dl 85 (510)
+.|++|.
T Consensus 221 ~~l~vDa 227 (398)
T 2pp0_A 221 FPLMVDA 227 (398)
T ss_dssp SCEEEEC
T ss_pred CeEEEEC
Confidence 3445554
No 462
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=25.53 E-value=2.3e+02 Score=28.27 Aligned_cols=93 Identities=13% Similarity=0.052 Sum_probs=61.0
Q ss_pred CChhcHHHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh--cCeeEEeCCcc
Q 010443 190 LTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE--TDSFMVARGDL 267 (510)
Q Consensus 190 lt~~D~~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~--~DgI~IgrgDL 267 (510)
++..+...+.+...+.|+ +|=-|+- +.+...++++.+ .+.|+ -=|+....+.+.++++. +|++++.++-.
T Consensus 200 ~~~~~a~~~~~~l~~~~i-~iE~P~~-~~~~~~~l~~~~-----~iPI~-~de~i~~~~~~~~~i~~~~~d~v~ik~~~~ 271 (379)
T 2rdx_A 200 WRVDNAIRLARATRDLDY-ILEQPCR-SYEECQQVRRVA-----DQPMK-LDECVTGLHMAQRIVADRGAEICCLKISNL 271 (379)
T ss_dssp SCHHHHHHHHHHTTTSCC-EEECCSS-SHHHHHHHHTTC-----CSCEE-ECTTCCSHHHHHHHHHHTCCSEEEEETTTT
T ss_pred CCHHHHHHHHHHHHhCCe-EEeCCcC-CHHHHHHHHhhC-----CCCEE-EeCCcCCHHHHHHHHHcCCCCEEEEecccc
Confidence 354554444355566788 8887765 445555554322 35544 45777677778887764 79999987665
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCeEEe
Q 010443 268 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 297 (510)
Q Consensus 268 g~e~~~~~v~~~qk~ii~~~~~~gkpviva 297 (510)
|- ..--.+++..|+++|.++.+.
T Consensus 272 GG-------it~~~~i~~~A~~~g~~~~~~ 294 (379)
T 2rdx_A 272 GG-------LSKARRTRDFLIDNRMPVVAE 294 (379)
T ss_dssp TS-------HHHHHHHHHHHHHTTCCEEEE
T ss_pred CC-------HHHHHHHHHHHHHcCCeEEEe
Confidence 43 123357889999999999874
No 463
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=25.49 E-value=1.3e+02 Score=29.56 Aligned_cols=52 Identities=8% Similarity=0.110 Sum_probs=35.2
Q ss_pred HHHHHHHHhCCCeEEEeec---CCCHHHHHHHHHHHHHHHHhcCCcEEEEecCCC
Q 010443 36 PMLEKLLRAGMNVARFNFS---HGTHEYQQETLNNLRAAMHNTQILCAVMLDTKG 87 (510)
Q Consensus 36 ~~l~~li~~G~~~~RiN~s---h~~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 87 (510)
...++.++.|++.+-+=.. ..+..+..+.+..+.+.++++|.|+-+.+...|
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g 166 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRP 166 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECC
T ss_pred hhHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCC
Confidence 4567788899999883332 333566667777777778889988666544443
No 464
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=25.43 E-value=2.3e+02 Score=28.41 Aligned_cols=130 Identities=18% Similarity=0.143 Sum_probs=67.0
Q ss_pred CCChhcHHHHH-------hccCcCCCCEEEEcCC-------------CCHH------------HHHHHHHHhc-cCCCCc
Q 010443 189 TLTEKDKEDIL-------RWGVPNNIDMIALSFV-------------RKGS------------DLVNVRKVLG-PHAKNI 235 (510)
Q Consensus 189 ~lt~~D~~di~-------~~a~~~g~d~I~~sfV-------------~sa~------------dv~~vr~~l~-~~~~~~ 235 (510)
.||..|++.+. +.|.+.|+|+|=+-.. +... -+.++-+.++ ..+.+.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 57777777663 3567889999877532 2111 1222222232 235677
Q ss_pred eEEEEecCH-------HHHhchHHHHhh-----cCeeEEeCCcccCC--CCchhHHHHHHHHHHHH-HHcCCCeEEehhh
Q 010443 236 QLMSKVENQ-------EGVVNFDDILRE-----TDSFMVARGDLGME--IPVEKIFLAQKMMIYKC-NLVGKPVVTATQM 300 (510)
Q Consensus 236 ~IiakIEt~-------~av~nldeI~~~-----~DgI~IgrgDLg~e--~~~~~v~~~qk~ii~~~-~~~gkpvivaTqm 300 (510)
.|..||--- ..++...++++. .|.|-+.-|...-. .+... ..+...++.. +..+.|++....+
T Consensus 227 pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~~GgI 304 (363)
T 3l5l_A 227 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGP--AFMGPIAERVRREAKLPVTSAWGF 304 (363)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCT--TTTHHHHHHHHHHHTCCEEECSST
T ss_pred eEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCc--chhHHHHHHHHHHcCCcEEEeCCC
Confidence 788888311 223333333332 58888875543221 11100 0111122222 2347998875432
Q ss_pred hHhhhcCCCCChHhHHHHHHHHHcC-CceEEec
Q 010443 301 LESMIKSPRPTRAEATDVANAVLDG-TDCVMLS 332 (510)
Q Consensus 301 LeSM~~~~~PtraEv~Dv~~av~~G-~D~imLs 332 (510)
-|. .+...++..| +|+|++.
T Consensus 305 ---------~s~---e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 305 ---------GTP---QLAEAALQANQLDLVSVG 325 (363)
T ss_dssp ---------TSH---HHHHHHHHTTSCSEEECC
T ss_pred ---------CCH---HHHHHHHHCCCccEEEec
Confidence 122 2345677888 9999986
No 465
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=25.26 E-value=95 Score=32.10 Aligned_cols=50 Identities=14% Similarity=0.257 Sum_probs=38.6
Q ss_pred CHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEEEecCC
Q 010443 34 SVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTK 86 (510)
Q Consensus 34 ~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 86 (510)
+.+++++|.++|.++.|+-.- + .+..+.+..||+.....+.++.++.|+.
T Consensus 40 Tv~QI~~L~~aG~eiVRvaVp--~-~~~A~al~~I~~~l~~~~~~vPLVADiH 89 (406)
T 4g9p_A 40 TTAQVLELHRAGSEIVRLTVN--D-EEAAKAVPEIKRRLLAEGVEVPLVGDFH 89 (406)
T ss_dssp HHHHHHHHHHHTCSEEEEECC--S-HHHHHHHHHHHHHHHHTTCCCCEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEecC--C-HHHHHhHHHHHHHHHhcCCCCceEeeec
Confidence 477899999999999997543 3 3445677888877666778888988876
No 466
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=25.12 E-value=4.7e+02 Score=25.22 Aligned_cols=147 Identities=17% Similarity=0.159 Sum_probs=74.3
Q ss_pred cCeeEEeCCc-ccC-CCCch-----hHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhH-HHHHHHHHcCCce
Q 010443 257 TDSFMVARGD-LGM-EIPVE-----KIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEA-TDVANAVLDGTDC 328 (510)
Q Consensus 257 ~DgI~IgrgD-Lg~-e~~~~-----~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv-~Dv~~av~~G~D~ 328 (510)
.|.|++ || |++ .+|++ .+.+.-...-..++....|.+++= +..|... +..+. .-+...+.-|+++
T Consensus 38 ~d~ilv--Gdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD--~pfgsy~---~~~~a~~~a~rl~kaGa~a 110 (264)
T 1m3u_A 38 LNVMLV--GDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLAD--LPFMAYA---TPEQAFENAATVMRAGANM 110 (264)
T ss_dssp CCEEEE--CTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEE--CCTTSSS---SHHHHHHHHHHHHHTTCSE
T ss_pred CCEEEE--CHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEE--CCCCCcC---CHHHHHHHHHHHHHcCCCE
Confidence 699999 55 443 35654 233344444444566666655431 2222221 33333 3344566789999
Q ss_pred EEeccCCCCCCCHHHHHHHHHHHHHHHhcccc-------hHHHHHHHHhcCCCCCCchHHHHHHHHHH---HHhcCCcEE
Q 010443 329 VMLSGESAAGAYPEIAVKIMRRICIEAESSLD-------YRAVFKEMIRSTPLPMSPLESLASSAVRT---ANKARAKLI 398 (510)
Q Consensus 329 imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~-------~~~~~~~~~~~~~~~~~~~~~ia~~av~~---A~~~~a~aI 398 (510)
+-|-+- . +.+..++.++ +.-+. -++..+..-... .....++-+..+++- ..+.+|.+|
T Consensus 111 VklEgg----~---e~~~~I~al~---~agipV~gHiGLtPq~v~~~ggf~--v~grt~~~a~~~i~rA~a~~eAGA~~i 178 (264)
T 1m3u_A 111 VKIEGG----E---WLVETVQMLT---ERAVPVCGHLGLTPQSVNIFGGYK--VQGRGDEAGDQLLSDALALEAAGAQLL 178 (264)
T ss_dssp EECCCS----G---GGHHHHHHHH---HTTCCEEEEEESCGGGHHHHTSSC--CCCCSHHHHHHHHHHHHHHHHHTCCEE
T ss_pred EEECCc----H---HHHHHHHHHH---HCCCCeEeeecCCceeecccCCeE--EEeCCHHHHHHHHHHHHHHHHCCCcEE
Confidence 999543 1 3344444432 22211 000001110000 111223333444443 345699999
Q ss_pred EEEcCCchHHHHHHhhCCCCcEEEE
Q 010443 399 VVLTRGGTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 399 vv~T~sG~tA~~iSr~RP~~PIiav 423 (510)
++--..-..++.+++-= ++|++.+
T Consensus 179 vlE~vp~~~a~~it~~l-~iP~igI 202 (264)
T 1m3u_A 179 VLECVPVELAKRITEAL-AIPVIGI 202 (264)
T ss_dssp EEESCCHHHHHHHHHHC-SSCEEEE
T ss_pred EEecCCHHHHHHHHHhC-CCCEEEe
Confidence 99776656688887765 4999998
No 467
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=25.02 E-value=2.5e+02 Score=22.34 Aligned_cols=61 Identities=5% Similarity=0.053 Sum_probs=35.4
Q ss_pred HHHHHhcCCcEEEEE----cCCchH-HHHHHhhCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCC
Q 010443 387 VRTANKARAKLIVVL----TRGGTT-AKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEG 459 (510)
Q Consensus 387 v~~A~~~~a~aIvv~----T~sG~t-A~~iSr~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~ 459 (510)
.+.......+.+++= ..+|.. .+.+.+..|.+||++++ . ........-.+..|+.-++..+
T Consensus 42 l~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls------~------~~~~~~~~~~~~~ga~~~l~Kp 107 (133)
T 3b2n_A 42 MKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVT------T------FKRPGYFEKAVVNDVDAYVLKE 107 (133)
T ss_dssp HHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEE------S------CCCHHHHHHHHHTTCSEEEETT
T ss_pred HHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEe------c------CCCHHHHHHHHHcCCcEEEECC
Confidence 333444566766653 235543 56666667999999992 2 2222222333457888888766
No 468
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=24.81 E-value=82 Score=31.06 Aligned_cols=72 Identities=17% Similarity=0.142 Sum_probs=45.9
Q ss_pred hccCcCCCCEEEEcCC----CCHHHHHHHHHHhccC-CCC-ceEEEEecCHHHHhchHHHHhh-cCeeEEeCCcccCCC
Q 010443 200 RWGVPNNIDMIALSFV----RKGSDLVNVRKVLGPH-AKN-IQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGMEI 271 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV----~sa~dv~~vr~~l~~~-~~~-~~IiakIEt~~av~nldeI~~~-~DgI~IgrgDLg~e~ 271 (510)
+.+.+.|+|++-++.. .+.+++.++.+..... +.. +.+..-+-..+-++++.+.++. ++|+.+||.=+...+
T Consensus 184 ~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~~ 262 (304)
T 1to3_A 184 KELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSSVI 262 (304)
T ss_dssp HHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGGGT
T ss_pred HHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCccc
Confidence 5678899999999985 4667777666653321 222 2233333222445667777765 799999998776533
No 469
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=24.69 E-value=4.2e+02 Score=24.46 Aligned_cols=33 Identities=18% Similarity=0.102 Sum_probs=24.0
Q ss_pred HcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 289 LVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 289 ~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
+.+.|+++-|- ..+..+...+...|+|..+.-.
T Consensus 72 ~~~~pvi~lt~------------~~~~~~~~~a~~~Ga~dyl~Kp 104 (259)
T 3luf_A 72 ERGLPVVILTA------------DISEDKREAWLEAGVLDYVMKD 104 (259)
T ss_dssp HTTCCEEEEEC------------C-CHHHHHHHHHTTCCEEEECS
T ss_pred hCCCCEEEEEc------------cCCHHHHHHHHHCCCcEEEeCC
Confidence 45789987553 3455677889999999988863
No 470
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=24.66 E-value=1.3e+02 Score=30.50 Aligned_cols=74 Identities=14% Similarity=0.254 Sum_probs=45.9
Q ss_pred ccccccccCCCCCCCCCeEEEEecCCCCC--CHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEEE
Q 010443 5 DIEGLLRDVPNDKRLPKTKIVCTLGPASR--SVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVM 82 (510)
Q Consensus 5 ~~~~~~~~~p~~~~~~~tkIi~TiGp~~~--~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i~ 82 (510)
-+.++|++..+ .+..+-+|+|-.+. ..+..+++++.|.+.+.+.+...+.++-.+.++.+|++. .-+.++
T Consensus 125 Pl~~LLGg~~r----~~v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~----~~~~l~ 196 (385)
T 3i6e_A 125 PVWALLGGKCR----DTIPLSCSIANPDFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARDF----PEFRVR 196 (385)
T ss_dssp BHHHHTTCCSC----SEEEBEEEECCSSHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHHC----TTSEEE
T ss_pred cHHHHhCcccC----CceEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHhC----CCCeEE
Confidence 34556664322 24455677763211 123456678889999999998877777777888888764 124455
Q ss_pred ecCC
Q 010443 83 LDTK 86 (510)
Q Consensus 83 ~Dl~ 86 (510)
+|..
T Consensus 197 vDan 200 (385)
T 3i6e_A 197 VDYN 200 (385)
T ss_dssp EECT
T ss_pred EECC
Confidence 5543
No 471
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=24.57 E-value=99 Score=30.89 Aligned_cols=72 Identities=17% Similarity=0.061 Sum_probs=42.2
Q ss_pred ChhcHHHHHhccCcCCCCEEEEcCC-------------CCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-
Q 010443 191 TEKDKEDILRWGVPNNIDMIALSFV-------------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE- 256 (510)
Q Consensus 191 t~~D~~di~~~a~~~g~d~I~~sfV-------------~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~- 256 (510)
+..|...+.+...+.|+|+|.++-- ...+-+..+++.+ ++.|++ .......++++++++.
T Consensus 237 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-----~iPVi~-~Ggi~t~e~a~~~l~~G 310 (349)
T 3hgj_A 237 SLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-----GLRTGA-VGLITTPEQAETLLQAG 310 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-----CCEEEE-CSSCCCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-----CceEEE-ECCCCCHHHHHHHHHCC
Confidence 4445444435566789999999831 0123345555544 345554 2322234456666665
Q ss_pred -cCeeEEeCCccc
Q 010443 257 -TDSFMVARGDLG 268 (510)
Q Consensus 257 -~DgI~IgrgDLg 268 (510)
+|+|++||+=|+
T Consensus 311 ~aD~V~iGR~~la 323 (349)
T 3hgj_A 311 SADLVLLGRVLLR 323 (349)
T ss_dssp SCSEEEESTHHHH
T ss_pred CceEEEecHHHHh
Confidence 799999997553
No 472
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=24.47 E-value=2.3e+02 Score=27.23 Aligned_cols=53 Identities=17% Similarity=0.087 Sum_probs=35.1
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHhCCCeEEEeec----------CCCHHHHHHHHHHHHHHHHhcCC
Q 010443 21 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFS----------HGTHEYQQETLNNLRAAMHNTQI 77 (510)
Q Consensus 21 ~tkIi~TiGp~~~~~~~l~~li~~G~~~~RiN~s----------h~~~~~~~~~i~~ir~~~~~~~~ 77 (510)
.+++.+-+ | +.+.+++.+++|++.+++-++ +.+.++..+.+..+-+.+++.|.
T Consensus 72 ~~~v~~l~-~---n~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~ 134 (295)
T 1ydn_A 72 GVRYSVLV-P---NMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGL 134 (295)
T ss_dssp SSEEEEEC-S---SHHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEe-C---CHHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCC
Confidence 57775543 4 589999999999999999753 55666655444444444445543
No 473
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=24.39 E-value=92 Score=28.39 Aligned_cols=45 Identities=18% Similarity=0.227 Sum_probs=35.6
Q ss_pred HHHHHHHHHhCCCeEEEeecCCCHHHH---HHHHHHHHHHHHhcCCcE
Q 010443 35 VPMLEKLLRAGMNVARFNFSHGTHEYQ---QETLNNLRAAMHNTQILC 79 (510)
Q Consensus 35 ~~~l~~li~~G~~~~RiN~sh~~~~~~---~~~i~~ir~~~~~~~~~v 79 (510)
.+.++.++++|++.+-+.+-.++..+. .++++.+++..+.++.++
T Consensus 34 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v 81 (227)
T 2tps_A 34 VTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREAGVPF 81 (227)
T ss_dssp HHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHHHcCCeE
Confidence 568999999999999888777777766 778888888777666554
No 474
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=24.17 E-value=3.1e+02 Score=27.20 Aligned_cols=73 Identities=16% Similarity=0.202 Sum_probs=45.2
Q ss_pred cccccccccCCCCCCCCCeEEEEecCCCCCCH----HHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcE
Q 010443 4 IDIEGLLRDVPNDKRLPKTKIVCTLGPASRSV----PMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILC 79 (510)
Q Consensus 4 ~~~~~~~~~~p~~~~~~~tkIi~TiGp~~~~~----~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v 79 (510)
.-+.++|+.. ..+....+|+|-.+.+. +..+++++.|-+.+.+.... +.++-.+.++.+|++. |.-+
T Consensus 119 ~Pl~~llGg~-----~~~vp~~~~~g~~~~~~~~~~~~a~~~~~~G~~~~KiKvG~-~~~~d~~~v~avr~a~---g~~~ 189 (372)
T 3cyj_A 119 LPLADALPRF-----HAEVPVYGSGGFTSYPLRRLQEQLGGWAAAGIPRVKMKVGR-EPEKDPERVRAAREAI---GESV 189 (372)
T ss_dssp CBHHHHSCCC-----CSSEEEEEECCCTTSCHHHHHHHHHHHHHTTCCEEEEECCS-SGGGHHHHHHHHHHHH---CTTS
T ss_pred CcHHHHhCCC-----CCCceEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC-CHHHHHHHHHHHHHHh---CCCC
Confidence 3345566642 13566777876433333 55677888999999998754 5555567777777754 3334
Q ss_pred EEEecC
Q 010443 80 AVMLDT 85 (510)
Q Consensus 80 ~i~~Dl 85 (510)
.|++|-
T Consensus 190 ~l~vDa 195 (372)
T 3cyj_A 190 ELMVDA 195 (372)
T ss_dssp EEEEEC
T ss_pred eEEEEC
Confidence 555555
No 475
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=24.08 E-value=1.3e+02 Score=28.81 Aligned_cols=54 Identities=9% Similarity=0.025 Sum_probs=29.8
Q ss_pred CceEEE--EecCHHHHhchHHHHh-hcCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCC
Q 010443 234 NIQLMS--KVENQEGVVNFDDILR-ETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKP 293 (510)
Q Consensus 234 ~~~Iia--kIEt~~av~nldeI~~-~~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkp 293 (510)
++.||+ -|-|.+.+ .+.++ -+|++++||+=|. +.+-+..+.+.+-......|.+
T Consensus 241 ~ipvia~GGI~~~~d~---~~~l~~GAd~V~vg~~~l~---~p~~~~~i~~~l~~~~~~~g~~ 297 (311)
T 1ep3_A 241 DIPIIGMGGVANAQDV---LEMYMAGASAVAVGTANFA---DPFVCPKIIDKLPELMDQYRIE 297 (311)
T ss_dssp SSCEEECSSCCSHHHH---HHHHHHTCSEEEECTHHHH---CTTHHHHHHHHHHHHHHHTTCS
T ss_pred CCCEEEECCcCCHHHH---HHHHHcCCCEEEECHHHHc---CcHHHHHHHHHHHHHHHHcCCC
Confidence 566665 35554433 23232 3899999998665 3334444555544444455543
No 476
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=24.01 E-value=1.6e+02 Score=29.77 Aligned_cols=73 Identities=8% Similarity=0.123 Sum_probs=44.9
Q ss_pred CcccccccccCCCCCCCCCeEEEEecCCC-CCCHHHHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEE
Q 010443 3 NIDIEGLLRDVPNDKRLPKTKIVCTLGPA-SRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAV 81 (510)
Q Consensus 3 ~~~~~~~~~~~p~~~~~~~tkIi~TiGp~-~~~~~~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i 81 (510)
+.-+.++|+... .+....+| |-. ..-.+..+++.+.|.+.+.+++.+ +.++-.+.++.+|++. |.-+.+
T Consensus 133 g~Pl~~LLGg~~-----~~v~~y~~-g~~~e~~~~~a~~~~~~G~~~iKlK~g~-~~~~d~~~v~avR~a~---g~~~~l 202 (392)
T 3ddm_A 133 GQPLWAWLGGSG-----DRIGVYAS-GINPENPEDVVARKAAEGYRAFKLKVGF-DDARDVRNALHVRELL---GAATPL 202 (392)
T ss_dssp TCBHHHHTTCSC-----CEEEEEEE-EECSSSHHHHHHHHHHHTCCCEEEECSS-CHHHHHHHHHHHHHHH---CSSSCE
T ss_pred CCcHHHHhCCCC-----CceeEEee-cCCHHHHHHHHHHHHHcCCCEEEEecCC-CHHHHHHHHHHHHHhc---CCCceE
Confidence 344566777442 33444444 322 233567778899999999999987 5665556666666653 433445
Q ss_pred EecC
Q 010443 82 MLDT 85 (510)
Q Consensus 82 ~~Dl 85 (510)
++|.
T Consensus 203 ~vDa 206 (392)
T 3ddm_A 203 MADA 206 (392)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 5554
No 477
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=23.93 E-value=1.4e+02 Score=28.13 Aligned_cols=46 Identities=13% Similarity=0.083 Sum_probs=30.8
Q ss_pred hHHHHhhcCeeEEeCCc------ccCCC----C--chhHHHHHHHHHHHHHHcCCCeE
Q 010443 250 FDDILRETDSFMVARGD------LGMEI----P--VEKIFLAQKMMIYKCNLVGKPVV 295 (510)
Q Consensus 250 ldeI~~~~DgI~IgrgD------Lg~e~----~--~~~v~~~qk~ii~~~~~~gkpvi 295 (510)
++++++..||+++.-|. ++-+. + .+.-......+++.+.+.++|++
T Consensus 55 ~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiL 112 (254)
T 3fij_A 55 AVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIF 112 (254)
T ss_dssp HHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEE
Confidence 56677789999999772 11111 1 12333456788899999999984
No 478
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=23.92 E-value=1e+02 Score=30.62 Aligned_cols=55 Identities=22% Similarity=0.110 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHHhCCCeEEEeecCCCH-----HHHHHHHHHHHHHHHhcCCcEEEEecCCCC
Q 010443 32 SRSVPMLEKLLRAGMNVARFNFSHGTH-----EYQQETLNNLRAAMHNTQILCAVMLDTKGP 88 (510)
Q Consensus 32 ~~~~~~l~~li~~G~~~~RiN~sh~~~-----~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 88 (510)
....+.++.|-+.|+|++|+-++.... +...+.++.+=+.+.+.|. .+++|+-+.
T Consensus 85 ~~~~~di~~ik~~G~N~VRi~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi--~Vild~H~~ 144 (359)
T 4hty_A 85 RFSKKHFEVIRSWGANVVRVPVHPRAWKERGVKGYLELLDQVVAWNNELGI--YTILDWHSI 144 (359)
T ss_dssp CCSHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEEEECCE
T ss_pred CcCHHHHHHHHhcCCCEEEEeccHHHhhccCCHHHHHHHHHHHHHHHHCCC--EEEEEcCCC
Confidence 345788999999999999998764331 2333444555555666774 577787643
No 479
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=23.90 E-value=1e+02 Score=30.03 Aligned_cols=53 Identities=11% Similarity=0.021 Sum_probs=34.5
Q ss_pred CCCHHHHHHHHHhCCCeEEEeecCC---C-------HHHHHHHHHHHHHHHHhcCCcEEEEecCC
Q 010443 32 SRSVPMLEKLLRAGMNVARFNFSHG---T-------HEYQQETLNNLRAAMHNTQILCAVMLDTK 86 (510)
Q Consensus 32 ~~~~~~l~~li~~G~~~~RiN~sh~---~-------~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 86 (510)
....+.++.|-+.|+|++||-++.. . .+...+.++.+=+.+++.|. .+++|+-
T Consensus 36 ~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~Gi--~vildlh 98 (341)
T 1vjz_A 36 NFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGI--HICISLH 98 (341)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTC--EEEEEEE
T ss_pred CCCHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcCC--EEEEEec
Confidence 4568899999999999999987531 1 12233444444445556664 5677764
No 480
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=23.87 E-value=3.9e+02 Score=24.35 Aligned_cols=79 Identities=14% Similarity=0.130 Sum_probs=42.4
Q ss_pred EEEcCCCCH---HHHHHHHHHhccCCCCceEEEEecCHH-HHhchHHHHhh-cCeeEEeCCcccCCCCchhHHHHHHHHH
Q 010443 210 IALSFVRKG---SDLVNVRKVLGPHAKNIQLMSKVENQE-GVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMI 284 (510)
Q Consensus 210 I~~sfV~sa---~dv~~vr~~l~~~~~~~~IiakIEt~~-av~nldeI~~~-~DgI~IgrgDLg~e~~~~~v~~~qk~ii 284 (510)
+++|...+. +-+..+.+.+.+.|.++.+..-=.+.+ -.+.++.+++. .|||++.+.|- ......+
T Consensus 10 ~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~----------~~~~~~~ 79 (291)
T 3l49_A 10 ITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNL----------DVLNPWL 79 (291)
T ss_dssp EEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCH----------HHHHHHH
T ss_pred EEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCCh----------hhhHHHH
Confidence 444544442 233445555556665544442111211 13344444443 79999986542 2334457
Q ss_pred HHHHHcCCCeEEeh
Q 010443 285 YKCNLVGKPVVTAT 298 (510)
Q Consensus 285 ~~~~~~gkpvivaT 298 (510)
+.+.+.|+|+++.-
T Consensus 80 ~~~~~~~iPvV~~~ 93 (291)
T 3l49_A 80 QKINDAGIPLFTVD 93 (291)
T ss_dssp HHHHHTTCCEEEES
T ss_pred HHHHHCCCcEEEec
Confidence 77889999988753
No 481
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=23.77 E-value=68 Score=32.19 Aligned_cols=51 Identities=12% Similarity=0.254 Sum_probs=33.5
Q ss_pred HHHHHHHHhCCCeEEEeecCCC--HHHHHHHHHHHHHHHHhcCCcEEEEecCCCC
Q 010443 36 PMLEKLLRAGMNVARFNFSHGT--HEYQQETLNNLRAAMHNTQILCAVMLDTKGP 88 (510)
Q Consensus 36 ~~l~~li~~G~~~~RiN~sh~~--~~~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 88 (510)
+.++.|-+.|+|++|+-++.+. .+...+.++.+=+.+.+.| +.+++|+-+.
T Consensus 58 ~~i~~lk~~G~N~VRip~~~~~~~~~~~l~~ld~~v~~a~~~G--iyVIlDlH~~ 110 (345)
T 3jug_A 58 TAIPAIAEQGANTIRIVLSDGGQWEKDDIDTVREVIELAEQNK--MVAVVEVHDA 110 (345)
T ss_dssp HHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTT--CEEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEEecCCCccCHHHHHHHHHHHHHHHHCC--CEEEEEeccC
Confidence 5789999999999999886432 1112344444445555666 4577888754
No 482
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=23.71 E-value=1.4e+02 Score=30.22 Aligned_cols=73 Identities=8% Similarity=0.107 Sum_probs=42.2
Q ss_pred ccccccccCCCCCCCCCeEEEEecCCCCCCHHH----HHHHHHhCCCeEEEeecC----CCHHHHHHHHHHHHHHHHhcC
Q 010443 5 DIEGLLRDVPNDKRLPKTKIVCTLGPASRSVPM----LEKLLRAGMNVARFNFSH----GTHEYQQETLNNLRAAMHNTQ 76 (510)
Q Consensus 5 ~~~~~~~~~p~~~~~~~tkIi~TiGp~~~~~~~----l~~li~~G~~~~RiN~sh----~~~~~~~~~i~~ir~~~~~~~ 76 (510)
-+.++|+...+ .+...-+|+|- .+++. .+++++.|.+.+.+.+.. ++.++ -++.+|.+.+..|
T Consensus 122 Pv~~LLGg~~~----~~v~~y~s~~~--~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~---d~~~v~avR~a~G 192 (386)
T 3fv9_G 122 PLCDMTGGRVA----GPVPVISSIGG--DTPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPAL---DAERITACLADRQ 192 (386)
T ss_dssp BHHHHTTCCCS----SCBCEEEEECS--CCHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHH---HHHHHHHHTTTCC
T ss_pred CHHHHhCCCCC----CceeeeEecCC--CCHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHH---HHHHHHHHHHHcC
Confidence 34556664322 34566778873 34443 456778899999999873 34444 4444444444444
Q ss_pred CcEEEEecCC
Q 010443 77 ILCAVMLDTK 86 (510)
Q Consensus 77 ~~v~i~~Dl~ 86 (510)
.-+.+++|..
T Consensus 193 ~~~~L~vDaN 202 (386)
T 3fv9_G 193 PGEWYLADAN 202 (386)
T ss_dssp TTCEEEEECT
T ss_pred CCCeEEEECC
Confidence 4455666643
No 483
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=23.70 E-value=1.2e+02 Score=30.10 Aligned_cols=113 Identities=11% Similarity=0.106 Sum_probs=67.1
Q ss_pred CCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh--cCeeEEeCCcccCCCCchhHHHHHHH
Q 010443 205 NNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE--TDSFMVARGDLGMEIPVEKIFLAQKM 282 (510)
Q Consensus 205 ~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~--~DgI~IgrgDLg~e~~~~~v~~~qk~ 282 (510)
.++..+++. -++.+-.+++.+... . .....+++++++. .|+++|+ .|. .....
T Consensus 49 ~~~~lvav~-d~~~~~a~~~a~~~~----~---------~~~~~~~~~ll~~~~vD~V~I~-------tp~----~~H~~ 103 (361)
T 3u3x_A 49 AGARLAGFH-EKDDALAAEFSAVYA----D---------ARRIATAEEILEDENIGLIVSA-------AVS----SERAE 103 (361)
T ss_dssp TTCEEEEEE-CSCHHHHHHHHHHSS----S---------CCEESCHHHHHTCTTCCEEEEC-------CCH----HHHHH
T ss_pred CCcEEEEEE-cCCHHHHHHHHHHcC----C---------CcccCCHHHHhcCCCCCEEEEe-------CCh----HHHHH
Confidence 456655543 345555555444331 0 1234678888875 6999996 222 34467
Q ss_pred HHHHHHHcCCCeEEehhhhHhhhcCC-CCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHH
Q 010443 283 MIYKCNLVGKPVVTATQMLESMIKSP-RPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIE 354 (510)
Q Consensus 283 ii~~~~~~gkpvivaTqmLeSM~~~~-~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~ 354 (510)
++.+|-++||+|++ ..| ..|.+|...+..+... ....+.-+....-.+| .++.+++++.+
T Consensus 104 ~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a~~-~g~~l~v~~~~R~~~p--~~~~~k~~i~~ 164 (361)
T 3u3x_A 104 LAIRAMQHGKDVLV---------DKPGMTSFDQLAKLRRVQAE-TGRIFSILYSEHFESP--ATVKAGELVAA 164 (361)
T ss_dssp HHHHHHHTTCEEEE---------ESCSCSSHHHHHHHHHHHHT-TCCCEEEECHHHHTCH--HHHHHHHHHHT
T ss_pred HHHHHHHCCCeEEE---------eCCCCCCHHHHHHHHHHHHH-cCCEEEEechHhhCCH--HHHHHHHHHHc
Confidence 77888999999997 555 5788888888887664 2233322222111124 56667776654
No 484
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=23.69 E-value=2.3e+02 Score=22.31 Aligned_cols=77 Identities=9% Similarity=0.078 Sum_probs=43.1
Q ss_pred HHHhcCCcEEEEEcC----CchH-HHHHHhhCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCCCCcC
Q 010443 389 TANKARAKLIVVLTR----GGTT-AKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEGSAKA 463 (510)
Q Consensus 389 ~A~~~~a~aIvv~T~----sG~t-A~~iSr~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~~~~~ 463 (510)
.......+.|++-.. +|.. .+.+-+..|.+||++++ . ........-.+..|+.-++..+.
T Consensus 41 ~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s------~------~~~~~~~~~~~~~g~~~~l~kp~--- 105 (134)
T 3f6c_A 41 RVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVS------A------KNDHFYGKHCADAGANGFVSKKE--- 105 (134)
T ss_dssp HHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEE------C------C---CTHHHHHHTTCSEEEEGGG---
T ss_pred HHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEe------C------CCChHHHHHHHHhCCCEEEeCCC---
Confidence 334456787777543 4543 56677778999999992 1 22222233344678888777653
Q ss_pred CCccCHHHHHHHHHHHHHHcCC
Q 010443 464 TDAESTEVILEGALKSAIEKGL 485 (510)
Q Consensus 464 ~~~~~~e~~i~~a~~~~~~~g~ 485 (510)
+.+ .+..+++.+.+.+.
T Consensus 106 ----~~~-~l~~~i~~~~~~~~ 122 (134)
T 3f6c_A 106 ----GMN-NIIAAIEAAKNGYC 122 (134)
T ss_dssp ----CTH-HHHHHHHHHHTTCC
T ss_pred ----CHH-HHHHHHHHHHCCCE
Confidence 222 34455555554443
No 485
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=23.68 E-value=2.3e+02 Score=26.75 Aligned_cols=42 Identities=7% Similarity=0.110 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHHhhCCCCcEEEE
Q 010443 381 SLASSAVRTANKARAKLIVVLTRG---------GTTAKLVAKYRPAVPILSV 423 (510)
Q Consensus 381 ~ia~~av~~A~~~~a~aIvv~T~s---------G~tA~~iSr~RP~~PIiav 423 (510)
..+...++.|...++++||+-++. |.++..+.+.- .|||+.+
T Consensus 98 ~~~~~i~~~a~~~~~DLiV~G~~g~~~~~~~~~Gs~~~~vl~~~-~~PVlvv 148 (319)
T 3olq_A 98 RPYEAIIEEVITDKHDLLIKMAHQHDKLGSLIFTPLDWQLLRKC-PAPVWMV 148 (319)
T ss_dssp CHHHHHHHHHHHHTCSEEEEEEBCC--CCSCBCCHHHHHHHHHC-SSCEEEE
T ss_pred ChHHHHHHHHHhcCCCEEEEecCcCchhhcccccccHHHHHhcC-CCCEEEe
Confidence 345566677888899999987753 77888887664 5999999
No 486
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=23.49 E-value=3.5e+02 Score=26.13 Aligned_cols=147 Identities=20% Similarity=0.241 Sum_probs=87.6
Q ss_pred CChhcHHHHHhccCcCC-CCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEe----cCHHHHhchHHHHhh-----cCe
Q 010443 190 LTEKDKEDILRWGVPNN-IDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV----ENQEGVVNFDDILRE-----TDS 259 (510)
Q Consensus 190 lt~~D~~di~~~a~~~g-~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakI----Et~~av~nldeI~~~-----~Dg 259 (510)
.++.++.++.+.+++.| +|+|=+-.-...+.+.++.+..... +++||+-- .|+. .+.+.++++. +|.
T Consensus 116 ~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~--~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~~GaDI 192 (276)
T 3o1n_A 116 LTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQH--NVAVIMSNHDFHKTPA-AEEIVQRLRKMQELGADI 192 (276)
T ss_dssp CCHHHHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHT--TCEEEEEEEESSCCCC-HHHHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhC--CCEEEEEeecCCCCcC-HHHHHHHHHHHHHcCCCE
Confidence 35555555558889999 9999998876677777776655443 45666543 3443 2334443332 475
Q ss_pred eEEeCCcccCCCCchhHHHHHHHHHHHHHH-cCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceE--EeccCCC
Q 010443 260 FMVARGDLGMEIPVEKIFLAQKMMIYKCNL-VGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCV--MLSGESA 336 (510)
Q Consensus 260 I~IgrgDLg~e~~~~~v~~~qk~ii~~~~~-~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~i--mLs~Eta 336 (510)
+=|+. ..-..+++..+.+-.-..... .++|+|.- +|=...+.||. .+.+. |.-.. .+...+|
T Consensus 193 vKia~----~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~-----~MG~~G~~SRi-----~~~~~-GS~vTf~~l~~~sA 257 (276)
T 3o1n_A 193 PKIAV----MPQTKADVLTLLTATVEMQERYADRPIITM-----SMSKTGVISRL-----AGEVF-GSAATFGAVKKASA 257 (276)
T ss_dssp EEEEE----CCSSHHHHHHHHHHHHHHHHHTCCSCCEEE-----ECSGGGTHHHH-----CHHHH-TCCEEECBSSCCSS
T ss_pred EEEEe----cCCChHHHHHHHHHHHHHHhcCCCCCEEEE-----ECCCchhhHHH-----HHHHh-CCceEecCCCCCCC
Confidence 55541 222345666665544433333 67898752 55555555554 66554 33332 3467799
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 010443 337 AGAYPEIAVKIMRRICIE 354 (510)
Q Consensus 337 ~G~yP~~~V~~m~~i~~~ 354 (510)
=|..+++-++.+-+++..
T Consensus 258 PGQl~~~~l~~~l~~l~~ 275 (276)
T 3o1n_A 258 PGAISVADLRTVLTILHQ 275 (276)
T ss_dssp TTCCBHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhcc
Confidence 999998888777666543
No 487
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=23.46 E-value=63 Score=30.28 Aligned_cols=80 Identities=15% Similarity=0.045 Sum_probs=51.3
Q ss_pred HHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEE-EEecCHHHHhchHHHHhh-cCeeEEeCCcccCCCCch
Q 010443 197 DILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLM-SKVENQEGVVNFDDILRE-TDSFMVARGDLGMEIPVE 274 (510)
Q Consensus 197 di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~Ii-akIEt~~av~nldeI~~~-~DgI~IgrgDLg~e~~~~ 274 (510)
.+.+.+.+.|+|++.+| .+.++++..+|+.+.. ..++ .-|-- ++- ++.+.++. +|.+++||+=+..+=|.+
T Consensus 119 ~~a~~a~~~G~~GvV~s-at~~~e~~~ir~~~~~----f~~v~pGI~~-~g~-~~~~a~~~Gad~iVvGr~I~~a~dp~~ 191 (215)
T 3ve9_A 119 YLREVARRVNPKGFVAP-ATRPSMISRVKGDFPD----KLVISPGVGT-QGA-KPGIALCHGADYEIVGRSVYQSADPVR 191 (215)
T ss_dssp HHHHHHHHHCCSEEECC-TTSHHHHHHHHHHCTT----SEEEECCTTS-TTC-CTTHHHHTTCSEEEECHHHHTSSSHHH
T ss_pred HHHHHHHHcCCCceeeC-CCCHHHHHHHHHhCCC----cEEEcCCCCc-CcC-CHHHHHHcCCCEEEeCHHHcCCCCHHH
Confidence 33367778899998876 3347889999987642 2222 33311 111 35454544 899999999998877766
Q ss_pred hHHHHHHHH
Q 010443 275 KIFLAQKMM 283 (510)
Q Consensus 275 ~v~~~qk~i 283 (510)
....+++.+
T Consensus 192 a~~~i~~~i 200 (215)
T 3ve9_A 192 KLEEIVRSQ 200 (215)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555544
No 488
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=23.43 E-value=1.1e+02 Score=30.78 Aligned_cols=70 Identities=17% Similarity=0.192 Sum_probs=45.5
Q ss_pred cccccccCCCCCCCCCeEEEEecCCCCCCHH----HHHHHHHhCCCeEEEeecCCCHHHHHHHHHHHHHHHHhcCCcEEE
Q 010443 6 IEGLLRDVPNDKRLPKTKIVCTLGPASRSVP----MLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAV 81 (510)
Q Consensus 6 ~~~~~~~~p~~~~~~~tkIi~TiGp~~~~~~----~l~~li~~G~~~~RiN~sh~~~~~~~~~i~~ir~~~~~~~~~v~i 81 (510)
+.++|+.. ..+....+|+|.. .+++ ..+++.++|.+.+.|++.+.+.++ .++++.+|++. |.-+.|
T Consensus 142 l~~llGg~-----~~~vp~~~~~g~~-~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-~e~v~avr~a~---g~d~~l 211 (388)
T 2nql_A 142 IRDLLGGG-----VDSFPAYVSGLPE-RTLKARGELAKYWQDRGFNAFKFATPVADDGP-AAEIANLRQVL---GPQAKI 211 (388)
T ss_dssp HHHHTTCC-----CSEEEEEEECCCC-SSHHHHHHHHHHHHHTTCCEEEEEGGGCTTCH-HHHHHHHHHHH---CTTSEE
T ss_pred HHHHhCCC-----CCceEeeEEeCCC-CCHHHHHHHHHHHHHhCCCEEEEeCCCCChHH-HHHHHHHHHHh---CCCCEE
Confidence 44556532 2345667788742 2444 345678899999999998756676 78888888764 333455
Q ss_pred EecC
Q 010443 82 MLDT 85 (510)
Q Consensus 82 ~~Dl 85 (510)
++|.
T Consensus 212 ~vDa 215 (388)
T 2nql_A 212 AADM 215 (388)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 5554
No 489
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=23.32 E-value=2.7e+02 Score=22.49 Aligned_cols=62 Identities=13% Similarity=0.129 Sum_probs=33.2
Q ss_pred HHHHHHhcCCcEEEEEc----CCch-HHHHHHhhCCCCcEEEEEecccccCCCCCCCCChhhhhhhccccCcEEEEeCC
Q 010443 386 AVRTANKARAKLIVVLT----RGGT-TAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEG 459 (510)
Q Consensus 386 av~~A~~~~a~aIvv~T----~sG~-tA~~iSr~RP~~PIiav~~~~~~tt~~~~~~~~~~~aR~L~L~~GV~P~l~~~ 459 (510)
+.+.......+.+++=. .+|. ..+.+.+..|.+||++++ . ........-.+..|+.-++..+
T Consensus 41 al~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls------~------~~~~~~~~~~~~~ga~~~l~KP 107 (141)
T 3cu5_A 41 AIQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMS------G------YSDKEYLKAAIKFRAIRYVEKP 107 (141)
T ss_dssp HHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEC------C------STTTCCC------CCCEEECSS
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEe------C------CCcHHHHHHHHhCCccEEEeCC
Confidence 34444455667666532 3454 356666677999999992 1 1221122334566888877765
No 490
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=23.28 E-value=1.3e+02 Score=29.65 Aligned_cols=50 Identities=10% Similarity=0.167 Sum_probs=35.9
Q ss_pred EEEecCC-CCCCHHHHHHHHHhCC--------------------CeEEEeecCCCHHHHHHHHHHHHHHHHh
Q 010443 24 IVCTLGP-ASRSVPMLEKLLRAGM--------------------NVARFNFSHGTHEYQQETLNNLRAAMHN 74 (510)
Q Consensus 24 Ii~TiGp-~~~~~~~l~~li~~G~--------------------~~~RiN~sh~~~~~~~~~i~~ir~~~~~ 74 (510)
+.+.+.. ..+..+..+.|.+.|+ +.+||+|++ +.++..+.++.++++.++
T Consensus 342 ~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~l~~ 412 (417)
T 3g7q_A 342 LWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-EPDKIEAGVKILAEEIER 412 (417)
T ss_dssp EEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS-CHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 3345533 2344566677777774 357999998 999999999999988664
No 491
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=23.23 E-value=2.3e+02 Score=26.73 Aligned_cols=131 Identities=13% Similarity=0.120 Sum_probs=64.0
Q ss_pred cHHHHHhccCcCCCCEEEEcCCC------CHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhhcCeeEEeCCcc
Q 010443 194 DKEDILRWGVPNNIDMIALSFVR------KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDL 267 (510)
Q Consensus 194 D~~di~~~a~~~g~d~I~~sfV~------sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~~DgI~IgrgDL 267 (510)
+..+..+.+.+.|+|+|=+.+.. +..++.++++.+++.|- .+.+ +.. .+++
T Consensus 37 ~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl--~i~~-~~~--------------------~~~~ 93 (296)
T 2g0w_A 37 SFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNM--KVTE-VEY--------------------ITQW 93 (296)
T ss_dssp CHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTC--EEEE-EEC--------------------BCCC
T ss_pred CHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCC--ceEe-ehh--------------------hhcc
Confidence 33333377889999999887521 23455666666665542 2221 101 1222
Q ss_pred cCC--CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHH
Q 010443 268 GME--IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAV 345 (510)
Q Consensus 268 g~e--~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V 345 (510)
... -..+. ....++.++.|.+.|.+.++.... .+.+ ++...+..+.+.+-+-++.|.-|+-.+.+ +.+.
T Consensus 94 ~~~~~~~~~~-~~~~~~~i~~A~~lGa~~v~~g~~------~~~~-~~~~~~~l~~l~~~a~Gv~l~lE~~~~~~-~~~~ 164 (296)
T 2g0w_A 94 GTAEDRTAEQ-QKKEQTTFHMARLFGVKHINCGLL------EKIP-EEQIIVALGELCDRAEELIIGLEFMPYSG-VADL 164 (296)
T ss_dssp SSTTTCCHHH-HHHHHHHHHHHHHHTCCEEEECCC------SCCC-HHHHHHHHHHHHHHHTTSEEEEECCTTSS-SCSH
T ss_pred ccCChHHHHH-HHHHHHHHHHHHHcCCCEEEEcCC------CCCC-HHHHHHHHHHHHHHhcCCEEEEEecCCCC-CCCH
Confidence 111 01111 234467888888999887754211 1112 33333333322211134566667653332 3445
Q ss_pred HHHHHHHHHHh
Q 010443 346 KIMRRICIEAE 356 (510)
Q Consensus 346 ~~m~~i~~~aE 356 (510)
+.+.++++++.
T Consensus 165 ~~~~~l~~~v~ 175 (296)
T 2g0w_A 165 QAAWRVAEACG 175 (296)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhC
Confidence 55555666664
No 492
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=23.23 E-value=46 Score=33.11 Aligned_cols=67 Identities=24% Similarity=0.345 Sum_probs=47.8
Q ss_pred HHHHhccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEecCHHHH--hchHHHHhh-cCeeEEeC-------C
Q 010443 196 EDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGV--VNFDDILRE-TDSFMVAR-------G 265 (510)
Q Consensus 196 ~di~~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakIEt~~av--~nldeI~~~-~DgI~Igr-------g 265 (510)
+.+ +-+++.|+|.|.+-.. ++++++++.+.++. + ++||---|+ +|+.++++. .|+|-+|. -
T Consensus 218 ~e~-~eAl~aGaDiImLDn~-s~~~l~~av~~~~~---~----v~leaSGGIt~~~i~~~A~tGVD~IsvGalthsa~~l 288 (300)
T 3l0g_A 218 SQV-EESLSNNVDMILLDNM-SISEIKKAVDIVNG---K----SVLEVSGCVNIRNVRNIALTGVDYISIGCITNSFQNK 288 (300)
T ss_dssp HHH-HHHHHTTCSEEEEESC-CHHHHHHHHHHHTT---S----SEEEEESSCCTTTHHHHHTTTCSEEECGGGTSSCCCC
T ss_pred HHH-HHHHHcCCCEEEECCC-CHHHHHHHHHhhcC---c----eEEEEECCCCHHHHHHHHHcCCCEEEeCccccCCCcc
Confidence 344 4567889999999886 67899988888753 3 345544444 688888887 79998873 5
Q ss_pred cccCCC
Q 010443 266 DLGMEI 271 (510)
Q Consensus 266 DLg~e~ 271 (510)
||++++
T Consensus 289 Disl~i 294 (300)
T 3l0g_A 289 DIGLDI 294 (300)
T ss_dssp CEEEEE
T ss_pred eeEEEe
Confidence 665554
No 493
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=23.20 E-value=2.1e+02 Score=27.34 Aligned_cols=115 Identities=17% Similarity=0.168 Sum_probs=69.7
Q ss_pred HHHhccCcCCCCEEEE-----cCCC----CHHHHHHHHHHhccCCCCceEEEEecCHHHHhchHHHHhh-cCeeEEeCCc
Q 010443 197 DILRWGVPNNIDMIAL-----SFVR----KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGD 266 (510)
Q Consensus 197 di~~~a~~~g~d~I~~-----sfV~----sa~dv~~vr~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~DgI~IgrgD 266 (510)
.+ +...+.|+|++-+ .||- .++-++++|+...+ .-+-+--||++++.. ++..+++ +|.|-+..
T Consensus 45 ~i-~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~--~~ldvHLmv~~p~~~--i~~~~~aGAd~itvH~-- 117 (246)
T 3inp_A 45 DV-KAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGIT--AGMDVHLMVKPVDAL--IESFAKAGATSIVFHP-- 117 (246)
T ss_dssp HH-HHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCC--SCEEEEEECSSCHHH--HHHHHHHTCSEEEECG--
T ss_pred HH-HHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCC--CeEEEEEeeCCHHHH--HHHHHHcCCCEEEEcc--
Confidence 44 4556689998877 6653 45778888876411 223344678888764 6666665 79998862
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEe-ccCCCCC
Q 010443 267 LGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML-SGESAAG 338 (510)
Q Consensus 267 Lg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imL-s~Eta~G 338 (510)
|-+ +. -.+.+++++++|+-++++.. |. |..|. ...+.++.|.+++ |-+...|
T Consensus 118 ---Ea~-~~----~~~~i~~ir~~G~k~Gvaln--------p~-Tp~e~---l~~~l~~vD~VlvMsV~PGfg 170 (246)
T 3inp_A 118 ---EAS-EH----IDRSLQLIKSFGIQAGLALN--------PA-TGIDC---LKYVESNIDRVLIMSVNPGFG 170 (246)
T ss_dssp ---GGC-SC----HHHHHHHHHTTTSEEEEEEC--------TT-CCSGG---GTTTGGGCSEEEEECSCTTC-
T ss_pred ---ccc-hh----HHHHHHHHHHcCCeEEEEec--------CC-CCHHH---HHHHHhcCCEEEEeeecCCCC
Confidence 211 12 25677888999999998742 21 21111 2345567998876 4444443
No 494
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=23.17 E-value=1.3e+02 Score=29.51 Aligned_cols=83 Identities=19% Similarity=0.271 Sum_probs=53.8
Q ss_pred HhchHHHHhh---cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCC-CCChHhHHHHHHHH
Q 010443 247 VVNFDDILRE---TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSP-RPTRAEATDVANAV 322 (510)
Q Consensus 247 v~nldeI~~~---~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~-~PtraEv~Dv~~av 322 (510)
..+++++++. .|+++|+ .| +.....++.+|-++||+|++ +.| ..+.+|..++..+.
T Consensus 69 ~~~~~~ll~~~~~vD~V~i~-------tp----~~~H~~~~~~al~aGkhVl~---------EKP~a~~~~e~~~l~~~a 128 (330)
T 4ew6_A 69 YTTIEAMLDAEPSIDAVSLC-------MP----PQYRYEAAYKALVAGKHVFL---------EKPPGATLSEVADLEALA 128 (330)
T ss_dssp ESSHHHHHHHCTTCCEEEEC-------SC----HHHHHHHHHHHHHTTCEEEE---------CSSSCSSHHHHHHHHHHH
T ss_pred cCCHHHHHhCCCCCCEEEEe-------CC----cHHHHHHHHHHHHcCCcEEE---------eCCCCCCHHHHHHHHHHH
Confidence 4578888876 6999986 22 34556788889999999996 444 57888888887765
Q ss_pred Hc-CCceEEeccCCCCCCCHHHHHHHHHHHHHH
Q 010443 323 LD-GTDCVMLSGESAAGAYPEIAVKIMRRICIE 354 (510)
Q Consensus 323 ~~-G~D~imLs~Eta~G~yP~~~V~~m~~i~~~ 354 (510)
.. |. -+|. +.... -+| .++.+++++.+
T Consensus 129 ~~~g~-~~~v-~~~~r-~~p--~~~~~k~~i~~ 156 (330)
T 4ew6_A 129 NKQGA-SLFA-SWHSR-YAP--AVEAAKAFLAS 156 (330)
T ss_dssp HHHTC-CEEE-CCGGG-GST--THHHHHHHHHS
T ss_pred HhcCC-eEEE-Eehhh-ccH--HHHHHHHHHhc
Confidence 54 33 2233 22222 123 46666666654
No 495
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=22.85 E-value=98 Score=30.04 Aligned_cols=49 Identities=12% Similarity=0.104 Sum_probs=31.0
Q ss_pred HHHHHHHHHhCCCeEEEeecCC-C--H------------HHHHHHHHHHHHHHHhcCCcEEEEecC
Q 010443 35 VPMLEKLLRAGMNVARFNFSHG-T--H------------EYQQETLNNLRAAMHNTQILCAVMLDT 85 (510)
Q Consensus 35 ~~~l~~li~~G~~~~RiN~sh~-~--~------------~~~~~~i~~ir~~~~~~~~~v~i~~Dl 85 (510)
.+.++.|-++|+|++|+.+.+- . + ++..+.++.+=+.++++|. .+++||
T Consensus 48 ~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi--~vil~l 111 (353)
T 2c0h_A 48 ESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNI--LIFFTL 111 (353)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTC--EEEEEE
T ss_pred HHHHHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCC--EEEEEc
Confidence 3477888999999999975432 0 1 1334455555556667775 455565
No 496
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=22.74 E-value=2.4e+02 Score=27.40 Aligned_cols=126 Identities=10% Similarity=0.076 Sum_probs=63.3
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCC---hHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcc
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPT---RAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESS 358 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~Pt---raEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~ 358 (510)
-+..+|+..|.++.+-.. .+..+. ...-..+...-..|++.+...++... .++..+.+...++..+-...
T Consensus 83 alA~~a~~~G~~~~iv~p------~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~-~~~~~~~~~a~~l~~~~~~~ 155 (338)
T 1tzj_A 83 QVAAVAAHLGMKCVLVQE------NWVNYSDAVYDRVGNIQMSRILGADVRLVPDGFDI-GFRRSWEDALESVRAAGGKP 155 (338)
T ss_dssp HHHHHHHHHTCEEEEEEE------CCSSCCCTTTTTSHHHHHHHHTTCEEEECCC--------CHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHhCCceEEEec------CCCCccccccccCccHHHHHhCCCEEEEeCCcchh-hHHHHHHHHHHHHHhcCCce
Confidence 345678999999876321 111111 00012334455579997765432211 01112344444443322111
Q ss_pred cchHHH-HHHHHhcCCCCCCchHHHHHHHHHHHHhc-----CCcEEEEEcCCchHHHHHHhh-----CCCCcEEEE
Q 010443 359 LDYRAV-FKEMIRSTPLPMSPLESLASSAVRTANKA-----RAKLIVVLTRGGTTAKLVAKY-----RPAVPILSV 423 (510)
Q Consensus 359 ~~~~~~-~~~~~~~~~~~~~~~~~ia~~av~~A~~~-----~a~aIvv~T~sG~tA~~iSr~-----RP~~PIiav 423 (510)
+.+... | ..|.. .+.-...+.++.+++ ..+.||+.+-+|.|+.-++++ .|. .|+++
T Consensus 156 ~~~p~~~~-------~n~~~-~~g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigv 222 (338)
T 1tzj_A 156 YAIPAGCS-------DHPLG-GLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGV 222 (338)
T ss_dssp EECCGGGT-------SSTTT-TTHHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEE
T ss_pred EEeCCCcC-------CCccc-HHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEE
Confidence 211111 1 11211 122334455666554 479999999999998777753 688 99999
No 497
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=22.70 E-value=5.4e+02 Score=25.03 Aligned_cols=109 Identities=12% Similarity=0.034 Sum_probs=56.6
Q ss_pred HHHHHhccCcCCC-CEEEEcCCCCHHHHHHHHHHhccCCCCceEEEEe--cCHHHHhchHHHHhh-cCeeEEeCCcccCC
Q 010443 195 KEDILRWGVPNNI-DMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV--ENQEGVVNFDDILRE-TDSFMVARGDLGME 270 (510)
Q Consensus 195 ~~di~~~a~~~g~-d~I~~sfV~sa~dv~~vr~~l~~~~~~~~IiakI--Et~~av~nldeI~~~-~DgI~IgrgDLg~e 270 (510)
.+.. ..+.+.|. .++...++ +++++.+..+.+++.-. ..+.+.+ -++.--+.++...+. .|+|.++-|.
T Consensus 26 ~~la-~av~~aG~lG~i~~~~~-~~~~~~~~i~~i~~~~~-~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~---- 98 (332)
T 2z6i_A 26 GDLA-GAVSKAGGLGIIGGGNA-PKEVVKANIDKIKSLTD-KPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGN---- 98 (332)
T ss_dssp HHHH-HHHHHHTSBEEEECTTC-CHHHHHHHHHHHHHHCC-SCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSC----
T ss_pred HHHH-HHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhcC-CCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCC----
Confidence 3344 44566675 56656654 56655443333322111 1222222 122211223333333 6999987652
Q ss_pred CCchhHHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEecc
Q 010443 271 IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 333 (510)
Q Consensus 271 ~~~~~v~~~qk~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~ 333 (510)
| ..+++.+++.|.|++.-. .+.. +...+...|+|++.+++
T Consensus 99 -p--------~~~i~~l~~~g~~v~~~v-----------~~~~---~a~~~~~~GaD~i~v~g 138 (332)
T 2z6i_A 99 -P--------SKYMERFHEAGIIVIPVV-----------PSVA---LAKRMEKIGADAVIAEG 138 (332)
T ss_dssp -G--------GGTHHHHHHTTCEEEEEE-----------SSHH---HHHHHHHTTCSCEEEEC
T ss_pred -h--------HHHHHHHHHcCCeEEEEe-----------CCHH---HHHHHHHcCCCEEEEEC
Confidence 2 235666777899988632 2222 33456678999999965
No 498
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=22.69 E-value=5.6e+02 Score=25.27 Aligned_cols=115 Identities=14% Similarity=0.123 Sum_probs=67.9
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChHhHHHHHHHHHcCCceEEeccCCCCCCCHHHHHHHHHHHHHHHhcccch
Q 010443 282 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 361 (510)
Q Consensus 282 ~ii~~~~~~gkpvivaTqmLeSM~~~~~PtraEv~Dv~~av~~G~D~imLs~Eta~G~yP~~~V~~m~~i~~~aE~~~~~ 361 (510)
-+..+|+..|.++.+- .|.......+...-..|++-+... |. .-++.+...++.++-. .+ |
T Consensus 122 a~A~aa~~~G~~~~iv-----------~P~~~~~~k~~~~~~~GA~V~~v~-----~~-~~~~~~~a~~~~~~~~-~~-~ 182 (366)
T 3iau_A 122 GVALAGQRLNCVAKIV-----------MPTTTPQIKIDAVRALGGDVVLYG-----KT-FDEAQTHALELSEKDG-LK-Y 182 (366)
T ss_dssp HHHHHHHHTTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECC-----SS-HHHHHHHHHHHHHHHT-CE-E
T ss_pred HHHHHHHHhCCceEEE-----------eCCCCCHHHHHHHHHCCCeEEEEC-----cC-HHHHHHHHHHHHHhcC-CE-e
Confidence 4566789999998763 243333345566677899866654 23 3466666666554321 11 1
Q ss_pred HHHHHHHHhcCCCCCCchHHHHHHHHHHHHhc-CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 010443 362 RAVFKEMIRSTPLPMSPLESLASSAVRTANKA-RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 423 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~ia~~av~~A~~~-~a~aIvv~T~sG~tA~~iSr----~RP~~PIiav 423 (510)
-..| ..+ .........+.++..++ ..+.+|+.+-+|.+..-+++ ..|.+.|+++
T Consensus 183 i~~~-------~n~-~~i~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigV 241 (366)
T 3iau_A 183 IPPF-------DDP-GVIKGQGTIGTEINRQLKDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGV 241 (366)
T ss_dssp CCSS-------SSH-HHHHHHHHHHHHHHHHCCSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEE
T ss_pred cCCC-------CCh-HHHHHHHHHHHHHHHhcCCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEE
Confidence 0000 000 01122233456666665 45889999999998665444 5799999999
No 499
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=22.53 E-value=1.3e+02 Score=28.13 Aligned_cols=33 Identities=6% Similarity=-0.235 Sum_probs=24.5
Q ss_pred hccCcCCCCEEEEcCCCCHHHHHHHHHHhccCCCC
Q 010443 200 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKN 234 (510)
Q Consensus 200 ~~a~~~g~d~I~~sfV~sa~dv~~vr~~l~~~~~~ 234 (510)
+.+.+.|+|+|=+..-- . ++.++++.+.+.|-.
T Consensus 38 ~~~~~~G~~~vEl~~~~-~-~~~~~~~~l~~~gl~ 70 (301)
T 3cny_A 38 SDIVVAGFQGTEVGGFF-P-GPEKLNYELKLRNLE 70 (301)
T ss_dssp HHHHHHTCCEECCCTTC-C-CHHHHHHHHHHTTCE
T ss_pred HHHHHhCCCEEEecCCC-C-CHHHHHHHHHHCCCe
Confidence 67788899999876432 2 788888888877643
No 500
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=22.51 E-value=5.2e+02 Score=24.88 Aligned_cols=130 Identities=12% Similarity=0.112 Sum_probs=74.4
Q ss_pred CChhcHHHHHhccCcCCCCEEEEcCC-------------CCHHHHHHHHHHhccCCCCceEEEEecC------HHHHhch
Q 010443 190 LTEKDKEDILRWGVPNNIDMIALSFV-------------RKGSDLVNVRKVLGPHAKNIQLMSKVEN------QEGVVNF 250 (510)
Q Consensus 190 lt~~D~~di~~~a~~~g~d~I~~sfV-------------~sa~dv~~vr~~l~~~~~~~~IiakIEt------~~av~nl 250 (510)
++.+|.--- +.+-+.|+|.|.+..- =+.+++..--+.+...-+...|++=.+- .++++|.
T Consensus 22 ~tayD~~sA-~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a 100 (264)
T 1m3u_A 22 ITAYDYSFA-KLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENA 100 (264)
T ss_dssp EECCSHHHH-HHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHHH
T ss_pred EeCcCHHHH-HHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHHH
Confidence 355666666 5667789999988631 1123333222223222245667777764 4577888
Q ss_pred HHHHhh-cCeeEEeCCcccCCCCchhHHHHHHHHHHHHHHcCCCeE----EehhhhHhh---hcCCCCChHh----HHHH
Q 010443 251 DDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVV----TATQMLESM---IKSPRPTRAE----ATDV 318 (510)
Q Consensus 251 deI~~~-~DgI~IgrgDLg~e~~~~~v~~~qk~ii~~~~~~gkpvi----vaTqmLeSM---~~~~~PtraE----v~Dv 318 (510)
..+++. +++|-+--|+ .+...|+++.++|.||+ +--|-...+ ....+ |.++ +.|.
T Consensus 101 ~rl~kaGa~aVklEgg~------------e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~gr-t~~~a~~~i~rA 167 (264)
T 1m3u_A 101 ATVMRAGANMVKIEGGE------------WLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGR-GDEAGDQLLSDA 167 (264)
T ss_dssp HHHHHTTCSEEECCCSG------------GGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCC-SHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECCcH------------HHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeC-CHHHHHHHHHHH
Confidence 888875 6888775441 23455677788999986 211211111 11112 2222 2444
Q ss_pred HHHHHcCCceEEecc
Q 010443 319 ANAVLDGTDCVMLSG 333 (510)
Q Consensus 319 ~~av~~G~D~imLs~ 333 (510)
......|+|+++|-+
T Consensus 168 ~a~~eAGA~~ivlE~ 182 (264)
T 1m3u_A 168 LALEAAGAQLLVLEC 182 (264)
T ss_dssp HHHHHHTCCEEEEES
T ss_pred HHHHHCCCcEEEEec
Confidence 557778999999953
Done!