Query 010445
Match_columns 510
No_of_seqs 255 out of 1572
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 06:57:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010445.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010445hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ysm_A Myeloid/lymphoid or mix 99.9 2.2E-22 7.6E-27 175.6 8.2 104 32-143 5-108 (111)
2 2kwj_A Zinc finger protein DPF 99.8 6.8E-22 2.3E-26 174.0 3.3 104 35-138 2-107 (114)
3 3v43_A Histone acetyltransfera 99.8 2.5E-21 8.6E-26 169.8 6.7 107 32-138 3-111 (112)
4 2ysm_A Myeloid/lymphoid or mix 99.5 1.3E-14 4.3E-19 126.5 5.1 96 91-231 9-104 (111)
5 4gne_A Histone-lysine N-methyl 99.4 2.9E-13 9.9E-18 118.2 6.2 86 30-133 11-98 (107)
6 3v43_A Histone acetyltransfera 99.3 4.7E-13 1.6E-17 117.2 4.7 88 99-230 21-111 (112)
7 2e6s_A E3 ubiquitin-protein li 99.3 2.1E-12 7.2E-17 106.5 7.1 55 82-137 20-75 (77)
8 2kwj_A Zinc finger protein DPF 99.3 5.7E-13 1.9E-17 117.1 3.6 87 99-230 18-107 (114)
9 3asl_A E3 ubiquitin-protein li 99.3 1.8E-12 6.2E-17 104.9 5.3 56 82-138 12-68 (70)
10 3shb_A E3 ubiquitin-protein li 99.3 2.7E-12 9.3E-17 105.9 5.2 56 82-138 20-76 (77)
11 2e6r_A Jumonji/ARID domain-con 99.1 1.5E-11 5E-16 104.6 3.1 58 81-138 8-65 (92)
12 1f62_A Transcription factor WS 99.1 6E-11 2E-15 89.7 3.2 48 91-138 2-49 (51)
13 3ask_A E3 ubiquitin-protein li 99.0 1.9E-10 6.6E-15 112.1 5.1 56 82-138 168-224 (226)
14 4gne_A Histone-lysine N-methyl 99.0 3.7E-10 1.3E-14 98.6 5.7 67 91-206 17-85 (107)
15 3lqh_A Histone-lysine N-methyl 98.9 3E-10 1E-14 107.7 2.8 63 171-233 1-65 (183)
16 1fp0_A KAP-1 corepressor; PHD 98.9 1.1E-09 3.8E-14 92.4 5.8 55 81-138 17-71 (88)
17 1mm2_A MI2-beta; PHD, zinc fin 98.9 1E-09 3.5E-14 86.3 4.1 45 91-138 11-55 (61)
18 2yql_A PHD finger protein 21A; 98.8 7.4E-10 2.5E-14 85.5 2.2 44 91-137 11-54 (56)
19 2lri_C Autoimmune regulator; Z 98.8 1E-09 3.4E-14 87.9 2.8 45 91-138 14-58 (66)
20 2l5u_A Chromodomain-helicase-D 98.8 1.9E-09 6.6E-14 84.7 3.9 46 90-138 12-57 (61)
21 2puy_A PHD finger protein 21A; 98.8 1.2E-09 4.2E-14 85.3 2.4 45 91-138 7-51 (60)
22 1xwh_A Autoimmune regulator; P 98.8 1.3E-09 4.4E-14 86.9 2.5 45 91-138 10-54 (66)
23 1fp0_A KAP-1 corepressor; PHD 98.8 7.7E-09 2.6E-13 87.3 6.1 63 24-97 15-77 (88)
24 1wev_A Riken cDNA 1110020M19; 98.7 3.1E-09 1.1E-13 89.5 2.3 49 90-138 17-71 (88)
25 2lri_C Autoimmune regulator; Z 98.7 9.7E-09 3.3E-13 82.2 4.6 48 32-90 10-57 (66)
26 2yt5_A Metal-response element- 98.7 3.2E-09 1.1E-13 84.1 1.2 48 91-138 8-60 (66)
27 1mm2_A MI2-beta; PHD, zinc fin 98.7 1E-08 3.6E-13 80.5 3.9 48 32-90 7-54 (61)
28 4bbq_A Lysine-specific demethy 98.7 5.8E-09 2E-13 91.2 2.6 109 88-232 6-115 (117)
29 2ku3_A Bromodomain-containing 98.6 7.6E-09 2.6E-13 83.9 1.0 47 90-138 17-65 (71)
30 2l5u_A Chromodomain-helicase-D 98.6 2.5E-08 8.7E-13 78.3 3.9 48 32-90 9-56 (61)
31 1xwh_A Autoimmune regulator; P 98.6 1.5E-08 5.2E-13 80.7 2.5 48 32-90 6-53 (66)
32 2yql_A PHD finger protein 21A; 98.6 1.4E-08 4.7E-13 78.4 2.1 49 31-90 6-54 (56)
33 1f62_A Transcription factor WS 98.6 3.3E-08 1.1E-12 74.6 4.0 47 36-90 2-48 (51)
34 2puy_A PHD finger protein 21A; 98.6 1.6E-08 5.6E-13 78.9 2.3 48 32-90 3-50 (60)
35 2vpb_A Hpygo1, pygopus homolog 98.6 6.4E-09 2.2E-13 83.0 -0.0 54 174-229 10-64 (65)
36 2k16_A Transcription initiatio 98.6 2.2E-08 7.4E-13 81.3 2.9 48 91-138 20-67 (75)
37 2l43_A N-teminal domain from h 98.6 1E-08 3.4E-13 86.4 0.8 46 91-138 27-74 (88)
38 3o36_A Transcription intermedi 98.5 3.8E-08 1.3E-12 92.5 4.2 45 91-138 6-50 (184)
39 3u5n_A E3 ubiquitin-protein li 98.5 4.2E-08 1.4E-12 94.0 3.8 45 91-138 9-53 (207)
40 2yt5_A Metal-response element- 98.5 2E-08 6.9E-13 79.5 0.7 57 31-90 3-59 (66)
41 2xb1_A Pygopus homolog 2, B-ce 98.5 2.4E-08 8.3E-13 86.6 1.3 56 174-231 5-61 (105)
42 2e6r_A Jumonji/ARID domain-con 98.5 4.5E-08 1.5E-12 83.0 2.7 54 29-90 11-64 (92)
43 1we9_A PHD finger family prote 98.5 2.8E-08 9.6E-13 78.3 1.2 54 171-231 5-58 (64)
44 2ro1_A Transcription intermedi 98.5 7E-08 2.4E-12 91.6 4.0 45 91-138 4-48 (189)
45 3o36_A Transcription intermedi 98.4 1E-07 3.4E-12 89.6 4.2 48 32-90 2-49 (184)
46 2l43_A N-teminal domain from h 98.4 5.9E-08 2E-12 81.7 2.3 53 29-89 20-72 (88)
47 2ku3_A Bromodomain-containing 98.4 8.7E-08 3E-12 77.7 2.5 52 31-90 13-64 (71)
48 1wev_A Riken cDNA 1110020M19; 98.4 6.4E-08 2.2E-12 81.4 1.7 55 33-90 15-70 (88)
49 3u5n_A E3 ubiquitin-protein li 98.4 1.5E-07 5E-12 90.2 3.9 48 32-90 5-52 (207)
50 2e6s_A E3 ubiquitin-protein li 98.4 2.2E-07 7.5E-12 76.4 4.1 50 33-90 25-75 (77)
51 3asl_A E3 ubiquitin-protein li 98.3 2.6E-07 9E-12 74.6 3.8 47 36-90 20-67 (70)
52 2lv9_A Histone-lysine N-methyl 98.3 3.1E-07 1E-11 78.7 4.3 44 94-138 32-75 (98)
53 2lbm_A Transcriptional regulat 98.3 5.7E-08 2E-12 88.6 -1.2 45 91-138 65-116 (142)
54 2kgg_A Histone demethylase jar 98.2 4.3E-07 1.5E-11 69.0 2.9 47 175-229 5-52 (52)
55 2ro1_A Transcription intermedi 98.2 4.3E-07 1.5E-11 86.1 3.5 46 34-90 2-47 (189)
56 1wep_A PHF8; structural genomi 98.2 3.9E-07 1.4E-11 74.8 2.7 51 173-231 13-63 (79)
57 3shb_A E3 ubiquitin-protein li 98.2 6.2E-07 2.1E-11 73.8 3.4 47 36-90 28-75 (77)
58 2k16_A Transcription initiatio 98.1 1.9E-06 6.5E-11 69.8 4.4 50 33-90 17-66 (75)
59 1wem_A Death associated transc 98.1 2.8E-07 9.4E-12 75.1 -0.7 54 173-231 17-70 (76)
60 1wen_A Inhibitor of growth fam 98.1 2.3E-06 7.8E-11 69.3 4.0 44 91-138 18-64 (71)
61 2lbm_A Transcriptional regulat 98.0 9.6E-07 3.3E-11 80.6 1.3 54 29-90 58-115 (142)
62 3o70_A PHD finger protein 13; 98.0 1.2E-06 4.1E-11 70.3 1.6 48 173-231 20-67 (68)
63 3ask_A E3 ubiquitin-protein li 98.0 1.9E-06 6.6E-11 84.0 2.8 49 34-90 174-223 (226)
64 4bbq_A Lysine-specific demethy 98.0 1.9E-06 6.5E-11 75.1 2.3 95 35-138 5-113 (117)
65 1weu_A Inhibitor of growth fam 98.0 4.1E-06 1.4E-10 71.0 3.7 44 91-138 38-84 (91)
66 2vnf_A ING 4, P29ING4, inhibit 98.0 1.8E-06 6.3E-11 67.6 1.3 44 91-138 12-58 (60)
67 1wee_A PHD finger family prote 97.9 1.9E-06 6.3E-11 69.6 1.0 49 173-230 17-65 (72)
68 2ri7_A Nucleosome-remodeling f 97.9 1.2E-06 4.2E-11 81.2 -0.2 53 171-231 7-59 (174)
69 3c6w_A P28ING5, inhibitor of g 97.9 2E-06 6.9E-11 67.2 1.1 44 91-138 11-57 (59)
70 2g6q_A Inhibitor of growth pro 97.9 3.2E-06 1.1E-10 66.7 1.1 44 91-138 13-59 (62)
71 2jmi_A Protein YNG1, ING1 homo 97.9 5.6E-06 1.9E-10 70.1 2.6 43 91-137 28-74 (90)
72 3kqi_A GRC5, PHD finger protei 97.8 1.2E-06 4.1E-11 71.3 -1.7 50 173-230 11-60 (75)
73 3ql9_A Transcriptional regulat 97.8 9.4E-07 3.2E-11 79.4 -2.9 45 91-138 59-110 (129)
74 3o70_A PHD finger protein 13; 97.8 7.7E-06 2.6E-10 65.6 2.6 46 91-138 21-66 (68)
75 3o7a_A PHD finger protein 13 v 97.8 4.8E-06 1.6E-10 63.2 1.3 46 174-230 6-51 (52)
76 1wen_A Inhibitor of growth fam 97.8 2E-05 6.9E-10 63.7 4.9 47 32-90 14-63 (71)
77 2lv9_A Histone-lysine N-methyl 97.8 1.8E-05 6.3E-10 67.6 4.6 46 35-90 29-74 (98)
78 1we9_A PHD finger family prote 97.7 1.2E-05 4.3E-10 63.0 2.0 48 91-138 8-57 (64)
79 1wee_A PHD finger family prote 97.7 1.6E-05 5.6E-10 64.0 2.5 47 91-138 18-65 (72)
80 1weu_A Inhibitor of growth fam 97.7 3.8E-05 1.3E-09 65.1 4.7 50 29-90 31-83 (91)
81 2rsd_A E3 SUMO-protein ligase 97.6 6.3E-06 2.2E-10 65.9 -0.3 51 174-230 12-64 (68)
82 1x4i_A Inhibitor of growth pro 97.5 1.8E-05 6.1E-10 63.9 0.9 44 91-138 8-54 (70)
83 2kgg_A Histone demethylase jar 97.5 2E-05 6.8E-10 59.8 1.0 47 91-137 4-52 (52)
84 3ql9_A Transcriptional regulat 97.5 1.9E-05 6.5E-10 71.0 0.7 54 29-90 52-109 (129)
85 1wem_A Death associated transc 97.4 1.3E-05 4.4E-10 65.1 -1.2 47 91-138 18-69 (76)
86 3o7a_A PHD finger protein 13 v 97.4 6.7E-05 2.3E-09 56.8 2.5 43 94-137 8-50 (52)
87 2vnf_A ING 4, P29ING4, inhibit 97.4 4.3E-05 1.5E-09 59.7 1.3 45 34-90 10-57 (60)
88 2g6q_A Inhibitor of growth pro 97.4 4.4E-05 1.5E-09 60.2 1.3 46 33-90 10-58 (62)
89 3c6w_A P28ING5, inhibitor of g 97.4 4.4E-05 1.5E-09 59.6 1.3 46 33-90 8-56 (59)
90 1wil_A KIAA1045 protein; ring 97.4 5.9E-05 2E-09 62.9 2.0 57 28-90 9-74 (89)
91 1wep_A PHF8; structural genomi 97.4 3.8E-05 1.3E-09 62.9 0.8 47 91-138 14-62 (79)
92 2jmi_A Protein YNG1, ING1 homo 97.3 6.6E-05 2.3E-09 63.5 2.2 46 33-90 25-74 (90)
93 2vpb_A Hpygo1, pygopus homolog 97.3 1.8E-05 6E-10 63.0 -1.9 47 91-137 10-64 (65)
94 2xb1_A Pygopus homolog 2, B-ce 97.3 4.8E-05 1.7E-09 65.8 0.6 48 91-138 5-60 (105)
95 1wew_A DNA-binding family prot 97.3 7E-05 2.4E-09 61.3 1.4 47 91-138 18-71 (78)
96 2rsd_A E3 SUMO-protein ligase 97.2 0.00012 4.1E-09 58.4 2.2 47 91-138 12-64 (68)
97 2ku7_A MLL1 PHD3-CYP33 RRM chi 97.2 0.00015 5E-09 63.1 2.6 42 189-230 1-43 (140)
98 2ri7_A Nucleosome-remodeling f 97.1 4.2E-05 1.5E-09 70.8 -1.6 47 91-138 10-58 (174)
99 3kv5_D JMJC domain-containing 96.9 9.5E-05 3.3E-09 79.5 -0.9 50 173-230 38-87 (488)
100 3kv4_A PHD finger protein 8; e 96.9 8.1E-05 2.8E-09 79.2 -1.5 50 174-231 7-56 (447)
101 1wew_A DNA-binding family prot 96.9 0.00041 1.4E-08 56.7 2.8 53 32-90 14-70 (78)
102 3kqi_A GRC5, PHD finger protei 96.9 0.00013 4.4E-09 59.2 -0.4 47 91-138 12-60 (75)
103 3rsn_A SET1/ASH2 histone methy 96.8 0.00064 2.2E-08 64.0 3.8 48 183-232 13-60 (177)
104 1x4i_A Inhibitor of growth pro 96.8 0.00039 1.3E-08 56.0 1.7 45 34-90 6-53 (70)
105 3lqh_A Histone-lysine N-methyl 96.5 0.00046 1.6E-08 65.3 0.1 48 91-138 4-62 (183)
106 1wil_A KIAA1045 protein; ring 96.2 0.00083 2.9E-08 56.1 0.2 47 91-138 17-75 (89)
107 3pur_A Lysine-specific demethy 96.1 0.002 6.8E-08 69.7 2.3 41 185-230 53-93 (528)
108 3kv5_D JMJC domain-containing 95.4 0.0033 1.1E-07 67.6 0.8 52 32-90 35-86 (488)
109 3kv4_A PHD finger protein 8; e 94.9 0.0021 7.1E-08 68.5 -2.5 45 94-138 9-55 (447)
110 3pur_A Lysine-specific demethy 94.6 0.015 5.2E-07 62.9 3.1 38 51-90 55-92 (528)
111 4ap4_A E3 ubiquitin ligase RNF 93.3 0.0032 1.1E-07 54.2 -4.4 93 34-138 7-121 (133)
112 3rsn_A SET1/ASH2 histone methy 92.7 0.07 2.4E-06 50.2 3.6 29 94-122 9-38 (177)
113 2ku7_A MLL1 PHD3-CYP33 RRM chi 91.7 0.04 1.4E-06 47.5 0.5 36 103-138 1-43 (140)
114 4ap4_A E3 ubiquitin ligase RNF 90.8 0.01 3.6E-07 50.8 -4.0 96 104-231 26-122 (133)
115 2ecl_A Ring-box protein 2; RNF 90.6 0.14 4.9E-06 41.2 2.9 68 150-231 6-73 (81)
116 3a1b_A DNA (cytosine-5)-methyl 90.5 0.039 1.3E-06 51.1 -0.7 91 33-138 35-133 (159)
117 2pv0_B DNA (cytosine-5)-methyl 89.5 0.035 1.2E-06 58.0 -2.1 91 33-138 49-147 (386)
118 2kiz_A E3 ubiquitin-protein li 88.4 0.16 5.3E-06 39.0 1.4 37 33-74 13-49 (69)
119 1iym_A EL5; ring-H2 finger, ub 88.1 0.26 9E-06 35.9 2.5 37 34-74 5-41 (55)
120 2pv0_B DNA (cytosine-5)-methyl 88.0 0.088 3E-06 55.0 -0.3 65 159-231 70-148 (386)
121 1x4j_A Ring finger protein 38; 87.8 0.14 4.8E-06 40.1 0.9 37 33-74 22-58 (75)
122 2ct0_A Non-SMC element 1 homol 86.8 0.36 1.2E-05 39.0 2.7 34 35-75 16-49 (74)
123 2d8s_A Cellular modulator of i 86.2 0.2 6.7E-06 40.9 0.8 38 34-75 15-55 (80)
124 2ect_A Ring finger protein 126 85.0 0.49 1.7E-05 37.1 2.6 37 33-74 14-50 (78)
125 1iym_A EL5; ring-H2 finger, ub 82.5 0.35 1.2E-05 35.2 0.8 48 172-231 5-52 (55)
126 1vyx_A ORF K3, K3RING; zinc-bi 81.7 0.27 9.2E-06 37.9 -0.1 47 34-90 6-54 (60)
127 2ecm_A Ring finger and CHY zin 80.3 0.46 1.6E-05 34.5 0.7 37 34-74 5-41 (55)
128 1v87_A Deltex protein 2; ring- 80.1 0.76 2.6E-05 38.6 2.1 55 34-90 25-89 (114)
129 3a1b_A DNA (cytosine-5)-methyl 79.9 0.43 1.5E-05 44.1 0.5 49 33-89 78-131 (159)
130 2l0b_A E3 ubiquitin-protein li 79.7 0.51 1.7E-05 38.6 0.9 37 33-74 39-75 (91)
131 2yur_A Retinoblastoma-binding 78.8 0.81 2.8E-05 35.8 1.8 37 31-74 12-48 (74)
132 2ep4_A Ring finger protein 24; 78.7 0.53 1.8E-05 36.5 0.7 37 33-74 14-50 (74)
133 2ct2_A Tripartite motif protei 77.9 0.6 2E-05 37.1 0.8 50 173-231 16-65 (88)
134 1v87_A Deltex protein 2; ring- 77.2 0.81 2.8E-05 38.4 1.4 55 173-232 26-92 (114)
135 3dpl_R Ring-box protein 1; ubi 77.0 0.72 2.5E-05 39.5 1.0 42 33-74 36-87 (106)
136 2ecm_A Ring finger and CHY zin 76.5 0.93 3.2E-05 32.8 1.4 47 173-231 6-52 (55)
137 1rut_X Flinc4, fusion protein 75.5 0.74 2.5E-05 42.6 0.8 28 157-184 53-81 (188)
138 2djb_A Polycomb group ring fin 75.3 1 3.4E-05 34.9 1.4 36 32-74 13-48 (72)
139 2jrp_A Putative cytoplasmic pr 75.2 1.1 3.8E-05 37.1 1.6 28 153-180 12-39 (81)
140 2egp_A Tripartite motif-contai 75.1 3.3 0.00011 32.0 4.4 35 33-75 11-45 (79)
141 2ecl_A Ring-box protein 2; RNF 73.4 1.1 3.7E-05 35.9 1.1 41 34-74 15-62 (81)
142 2d8t_A Dactylidin, ring finger 73.3 1.7 5.9E-05 33.4 2.3 34 33-74 14-47 (71)
143 2jtn_A LIM domain-binding prot 72.7 3.6 0.00012 37.6 4.7 69 91-183 62-130 (182)
144 2ep4_A Ring finger protein 24; 72.7 0.62 2.1E-05 36.1 -0.4 49 173-234 16-64 (74)
145 1x4j_A Ring finger protein 38; 72.5 0.46 1.6E-05 37.1 -1.2 47 172-231 23-69 (75)
146 2rgt_A Fusion of LIM/homeobox 72.4 3.6 0.00012 37.1 4.6 44 136-183 33-76 (169)
147 1weq_A PHD finger protein 7; s 72.3 2.6 8.8E-05 35.1 3.2 36 49-90 41-77 (85)
148 2d8s_A Cellular modulator of i 72.3 1.3 4.3E-05 36.0 1.3 50 173-232 16-68 (80)
149 3k1l_B Fancl; UBC, ring, RWD, 71.3 1.5 5.2E-05 45.4 2.0 54 174-231 310-370 (381)
150 2xjy_A Rhombotin-2; oncoprotei 70.8 2.1 7.2E-05 36.8 2.5 49 136-184 29-78 (131)
151 2ysl_A Tripartite motif-contai 70.7 2.9 9.9E-05 31.9 3.0 34 33-74 19-52 (73)
152 3lrq_A E3 ubiquitin-protein li 69.4 1.1 3.6E-05 37.3 0.3 35 33-74 21-55 (100)
153 2csy_A Zinc finger protein 183 68.6 1.6 5.4E-05 34.5 1.1 34 33-74 14-47 (81)
154 1chc_A Equine herpes virus-1 r 68.4 1 3.5E-05 34.1 -0.0 34 34-74 5-38 (68)
155 2ea6_A Ring finger protein 4; 67.8 1.2 4E-05 33.6 0.2 41 33-74 14-54 (69)
156 2ecy_A TNF receptor-associated 67.8 1.9 6.6E-05 32.6 1.4 35 32-74 13-47 (66)
157 2ysj_A Tripartite motif-contai 67.1 2.5 8.5E-05 31.6 1.9 45 33-89 19-63 (63)
158 3dpl_R Ring-box protein 1; ubi 65.2 1.8 6.2E-05 36.9 0.9 68 152-231 30-98 (106)
159 2ecv_A Tripartite motif-contai 63.3 2.5 8.7E-05 32.9 1.4 49 173-231 20-68 (85)
160 2ct2_A Tripartite motif protei 61.7 3.4 0.00012 32.5 1.9 49 33-89 14-62 (88)
161 2ecn_A Ring finger protein 141 60.8 1.5 5.3E-05 33.4 -0.3 33 33-74 14-46 (70)
162 2lq6_A Bromodomain-containing 60.5 4 0.00014 33.7 2.1 34 82-120 14-49 (87)
163 2ecj_A Tripartite motif-contai 60.3 4.7 0.00016 29.2 2.3 45 33-89 14-58 (58)
164 4a0k_B E3 ubiquitin-protein li 59.5 2.2 7.4E-05 37.3 0.3 42 34-75 48-99 (117)
165 3ng2_A RNF4, snurf, ring finge 59.2 1.4 4.9E-05 33.4 -0.8 41 33-74 9-49 (71)
166 2ct0_A Non-SMC element 1 homol 58.2 2.3 7.9E-05 34.2 0.3 44 91-138 17-60 (74)
167 2ckl_B Ubiquitin ligase protei 58.0 2.8 9.4E-05 37.7 0.8 35 33-74 53-87 (165)
168 3l11_A E3 ubiquitin-protein li 57.0 6.8 0.00023 32.8 3.1 44 33-90 14-57 (115)
169 2jtn_A LIM domain-binding prot 56.9 9.2 0.00031 34.8 4.2 16 130-145 141-156 (182)
170 2ecw_A Tripartite motif-contai 56.2 6.2 0.00021 30.6 2.5 49 33-90 18-66 (85)
171 3nw0_A Non-structural maintena 56.0 3.8 0.00013 39.8 1.4 44 34-89 180-223 (238)
172 2lq6_A Bromodomain-containing 55.7 5.5 0.00019 32.9 2.2 35 31-71 14-50 (87)
173 2ckl_A Polycomb group ring fin 55.3 7.5 0.00026 32.2 3.0 45 173-232 16-60 (108)
174 2cup_A Skeletal muscle LIM-pro 55.2 11 0.00037 30.7 3.9 42 139-183 36-77 (101)
175 1e4u_A Transcriptional repress 54.6 4 0.00014 32.7 1.1 49 173-232 12-60 (78)
176 2ect_A Ring finger protein 126 54.0 4 0.00014 31.7 1.0 44 91-138 17-60 (78)
177 2yur_A Retinoblastoma-binding 53.9 6.1 0.00021 30.6 2.1 46 173-231 16-61 (74)
178 2y43_A E3 ubiquitin-protein li 53.0 4 0.00014 33.3 0.9 35 33-74 21-55 (99)
179 3lrq_A E3 ubiquitin-protein li 52.7 3.4 0.00012 34.2 0.4 45 173-231 23-67 (100)
180 1m3v_A FLIN4, fusion of the LI 52.5 5.3 0.00018 34.2 1.6 45 139-183 35-80 (122)
181 2ckl_A Polycomb group ring fin 52.4 4.6 0.00016 33.6 1.2 35 33-74 14-48 (108)
182 3ztg_A E3 ubiquitin-protein li 52.3 4.7 0.00016 32.3 1.2 47 32-90 11-57 (92)
183 2co8_A NEDD9 interacting prote 52.0 11 0.00036 30.0 3.3 11 110-120 34-44 (82)
184 2ecv_A Tripartite motif-contai 51.4 4.8 0.00016 31.2 1.1 34 33-74 18-51 (85)
185 4a0k_B E3 ubiquitin-protein li 50.8 3.7 0.00013 35.8 0.4 67 153-231 42-109 (117)
186 2kiz_A E3 ubiquitin-protein li 50.0 2 6.8E-05 32.6 -1.3 44 91-138 16-59 (69)
187 2xeu_A Ring finger protein 4; 47.5 2.2 7.7E-05 31.5 -1.4 40 34-74 3-42 (64)
188 2ckl_B Ubiquitin ligase protei 46.6 3.7 0.00013 36.8 -0.3 45 174-232 56-100 (165)
189 4ayc_A E3 ubiquitin-protein li 46.3 5.1 0.00017 35.0 0.5 31 35-73 54-84 (138)
190 3nw0_A Non-structural maintena 44.6 6.2 0.00021 38.3 0.9 43 91-137 182-224 (238)
191 3pfq_A PKC-B, PKC-beta, protei 44.1 11 0.00036 41.4 2.8 84 34-120 48-146 (674)
192 1faq_A RAF-1; transferase, ser 43.8 12 0.00042 27.1 2.2 30 173-207 15-44 (52)
193 3k1l_B Fancl; UBC, ring, RWD, 43.0 16 0.00055 37.9 3.6 39 34-74 308-348 (381)
194 2l0b_A E3 ubiquitin-protein li 41.5 2.7 9.4E-05 34.1 -1.9 44 91-138 42-85 (91)
195 1r79_A Diacylglycerol kinase, 40.2 13 0.00043 30.7 2.0 33 174-206 40-72 (84)
196 4b6d_A RAC GTPase-activating p 39.6 12 0.00041 28.9 1.7 34 171-206 18-51 (61)
197 2dlq_A GLI-kruppel family memb 39.5 29 0.001 27.9 4.2 42 187-234 63-106 (124)
198 2jne_A Hypothetical protein YF 39.2 9 0.00031 32.7 0.9 28 153-180 42-69 (101)
199 3fl2_A E3 ubiquitin-protein li 38.2 8.6 0.00029 32.7 0.7 33 34-74 52-84 (124)
200 2xqn_T Testin, TESS; metal-bin 37.8 21 0.00073 30.1 3.2 43 139-184 33-75 (126)
201 2ee8_A Protein ODD-skipped-rel 37.5 28 0.00097 27.4 3.7 40 189-234 44-85 (106)
202 2enz_A NPKC-theta, protein kin 37.2 26 0.00089 26.8 3.3 34 173-207 24-57 (65)
203 1iml_A CRIP, cysteine rich int 36.4 20 0.00068 27.6 2.5 28 91-120 2-29 (76)
204 3pfq_A PKC-B, PKC-beta, protei 35.7 19 0.00065 39.4 3.1 30 91-120 50-81 (674)
205 1jm7_A BRCA1, breast cancer ty 35.3 8.5 0.00029 31.7 0.2 44 34-89 21-64 (112)
206 1t1h_A Gspef-atpub14, armadill 34.5 11 0.00036 29.2 0.6 34 33-74 7-40 (78)
207 2egp_A Tripartite motif-contai 34.3 16 0.00055 28.0 1.6 30 109-138 29-61 (79)
208 1ptq_A Protein kinase C delta 33.9 18 0.00061 25.9 1.7 35 172-207 11-45 (50)
209 1g25_A CDK-activating kinase a 33.5 11 0.00037 28.2 0.5 36 34-73 3-39 (65)
210 2dmd_A Zinc finger protein 64, 33.3 29 0.00099 26.8 3.0 42 188-233 34-75 (96)
211 1wig_A KIAA1808 protein; LIM d 32.8 42 0.0015 25.7 3.9 12 134-145 29-40 (73)
212 2yt9_A Zinc finger-containing 32.7 40 0.0014 25.9 3.8 44 188-234 33-77 (95)
213 2eli_A Protein kinase C alpha 32.5 32 0.0011 27.9 3.2 35 172-207 28-62 (85)
214 2d8y_A Eplin protein; LIM doma 32.3 29 0.001 27.7 3.0 28 91-120 17-44 (91)
215 3l11_A E3 ubiquitin-protein li 32.1 19 0.00066 29.9 1.9 27 109-138 32-58 (115)
216 2cuq_A Four and A half LIM dom 31.8 50 0.0017 25.4 4.2 12 135-146 40-51 (80)
217 1b8t_A Protein (CRP1); LIM dom 31.5 22 0.00077 32.5 2.4 13 87-99 32-44 (192)
218 1j2o_A FLIN2, fusion of rhombo 31.4 47 0.0016 27.7 4.2 31 136-166 30-60 (114)
219 2d9g_A YY1-associated factor 2 30.8 66 0.0023 24.1 4.5 22 126-147 7-36 (53)
220 2l4z_A DNA endonuclease RBBP8, 30.4 22 0.00075 30.6 2.0 28 91-120 63-90 (123)
221 1z6u_A NP95-like ring finger p 30.2 13 0.00046 33.0 0.6 33 34-74 78-110 (150)
222 2cu8_A Cysteine-rich protein 2 29.8 31 0.001 26.5 2.6 28 91-120 11-38 (76)
223 2yuu_A NPKC-delta, protein kin 29.2 31 0.0011 27.7 2.6 36 171-207 27-62 (83)
224 2dkt_A Ring finger and CHY zin 28.9 37 0.0013 30.7 3.3 9 34-42 58-66 (143)
225 2enn_A NPKC-theta, protein kin 28.1 31 0.0011 27.3 2.4 36 171-207 33-68 (77)
226 2kmk_A Zinc finger protein GFI 28.1 27 0.00091 25.9 1.9 41 189-233 28-68 (82)
227 2fnf_X Putative RAS effector N 27.5 35 0.0012 26.9 2.6 29 174-206 37-65 (72)
228 3uej_A NPKC-delta, protein kin 26.7 27 0.00093 26.6 1.7 35 172-207 20-54 (65)
229 1jm7_B BARD1, BRCA1-associated 25.5 30 0.001 29.0 2.0 32 34-72 22-53 (117)
230 3knv_A TNF receptor-associated 25.1 12 0.00041 33.1 -0.7 34 33-74 30-63 (141)
231 1y8f_A UNC-13 homolog A, MUNC1 25.1 31 0.001 26.5 1.8 33 173-206 25-57 (66)
232 2egq_A FHL1 protein; LIM domai 24.9 69 0.0024 24.4 3.9 12 135-146 45-56 (77)
233 1jm7_A BRCA1, breast cancer ty 24.8 15 0.00053 30.1 -0.0 44 91-138 23-66 (112)
234 1x63_A Skeletal muscle LIM-pro 24.7 63 0.0022 24.9 3.6 13 134-146 41-53 (82)
235 3hct_A TNF receptor-associated 24.6 24 0.00081 29.7 1.1 34 33-74 17-50 (118)
236 2dj7_A Actin-binding LIM prote 24.5 44 0.0015 26.2 2.7 28 91-120 17-44 (80)
237 1bor_A Transcription factor PM 24.5 43 0.0015 24.4 2.4 23 109-138 23-45 (56)
238 1x4l_A Skeletal muscle LIM-pro 24.2 56 0.0019 24.6 3.1 12 135-146 34-45 (72)
239 1rmd_A RAG1; V(D)J recombinati 24.1 17 0.0006 30.3 0.2 33 34-74 23-55 (116)
240 6rxn_A Rubredoxin; electron tr 24.1 51 0.0017 24.2 2.7 33 105-138 5-38 (46)
241 2k1p_A Zinc finger RAN-binding 23.6 38 0.0013 22.9 1.8 17 82-98 5-29 (33)
242 1x64_A Alpha-actinin-2 associa 23.5 46 0.0016 26.4 2.6 11 136-146 51-61 (89)
243 3uk3_C Zinc finger protein 217 23.3 29 0.00098 24.1 1.2 14 220-233 30-43 (57)
244 2lv2_A Insulinoma-associated p 22.6 24 0.00081 28.4 0.7 15 220-234 54-68 (85)
245 2lk0_A RNA-binding protein 5; 22.4 28 0.00096 23.4 0.9 17 82-98 4-28 (32)
246 2dar_A PDZ and LIM domain prot 22.4 41 0.0014 26.8 2.1 11 136-146 51-61 (90)
247 3fl2_A E3 ubiquitin-protein li 21.7 11 0.00038 32.0 -1.6 27 109-138 69-95 (124)
248 2pk7_A Uncharacterized protein 21.6 28 0.00095 27.6 0.9 26 175-200 11-36 (69)
249 3gj3_B Nuclear pore complex pr 21.4 42 0.0014 23.0 1.6 11 128-138 5-15 (33)
250 2csh_A Zinc finger protein 297 21.3 68 0.0023 25.4 3.3 41 189-233 36-76 (110)
251 2hf1_A Tetraacyldisaccharide-1 21.2 25 0.00084 27.9 0.5 26 175-200 11-36 (68)
252 1weo_A Cellulose synthase, cat 21.0 33 0.0011 28.9 1.2 39 33-72 15-53 (93)
253 2jr6_A UPF0434 protein NMA0874 20.8 25 0.00087 27.8 0.5 11 190-200 26-36 (68)
254 4g9i_A Hydrogenase maturation 20.6 22 0.00075 40.2 0.1 65 126-197 102-185 (772)
255 2lt7_A Transcriptional regulat 20.6 36 0.0012 29.3 1.5 13 189-201 49-61 (133)
256 3vth_A Hydrogenase maturation 20.3 26 0.00087 39.6 0.6 66 125-197 106-190 (761)
257 1rfh_A RAS association (ralgds 20.1 36 0.0012 25.7 1.2 20 188-207 34-53 (59)
No 1
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.86 E-value=2.2e-22 Score=175.65 Aligned_cols=104 Identities=28% Similarity=0.799 Sum_probs=92.3
Q ss_pred ccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCCcCcccccCCCCcceEEcCCCC
Q 010445 32 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCRICEICRRTGDPNKFMFCRRCD 111 (510)
Q Consensus 32 ~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~~C~vC~~~gd~~~lL~Cd~C~ 111 (510)
.++++|.+|..+|+ .++||.|+.|+++||+.||+++..+. .++.|+|++|.+|.+|++.+++..||+|+.|+
T Consensus 5 ~~~~~C~~C~~~g~-----~~~ll~C~~C~~~~H~~Cl~~~~~~~---~~~~W~C~~C~~C~~C~~~~~~~~ll~Cd~C~ 76 (111)
T 2ysm_A 5 SSGANCAVCDSPGD-----LLDQFFCTTCGQHYHGMCLDIAVTPL---KRAGWQCPECKVCQNCKQSGEDSKMLVCDTCD 76 (111)
T ss_dssp CCCSCBTTTCCCCC-----TTTSEECSSSCCEECTTTTTCCCCTT---TSTTCCCTTTCCCTTTCCCSCCTTEEECSSSC
T ss_pred CCCCCCcCCCCCCC-----CcCCeECCCCCCCcChHHhCCccccc---cccCccCCcCCcccccCccCCCCCeeECCCCC
Confidence 46789999999873 34789999999999999999976532 45899999999999999999888999999999
Q ss_pred CcccccccCCCCcCCCCCCccccCCcccccCC
Q 010445 112 AAYHCYCQHPPHKNVSSGPYLCPKHTKCHSCG 143 (510)
Q Consensus 112 ~~YH~~CL~P~l~~ip~~~W~Cp~C~~C~~Cg 143 (510)
++||.+|+.|++..+|.+.|+|+.|..|..+.
T Consensus 77 ~~yH~~Cl~ppl~~~P~g~W~C~~C~~c~~g~ 108 (111)
T 2ysm_A 77 KGYHTFCLQPVMKSVPTNGWKCKNCRICISGP 108 (111)
T ss_dssp CEEEGGGSSSCCSSCCSSCCCCHHHHCCSCSC
T ss_pred cHHhHHhcCCccccCCCCCcCCcCCcCcCCCC
Confidence 99999999999999999999999998876554
No 2
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.83 E-value=6.8e-22 Score=174.02 Aligned_cols=104 Identities=28% Similarity=0.785 Sum_probs=90.1
Q ss_pred cccccccccc--cCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCCcCcccccCCCCcceEEcCCCCC
Q 010445 35 VMCRLCFVGE--NEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCRICEICRRTGDPNKFMFCRRCDA 112 (510)
Q Consensus 35 ~~C~vC~~~G--~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~~C~vC~~~gd~~~lL~Cd~C~~ 112 (510)
++|.+|.+++ |..++.+++||.|+.|+++||+.||++.......+..+.|+|++|++|.+|+...++..||.|+.|++
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~~~~~~ll~Cd~C~~ 81 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDR 81 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGCCCTTTTCCTTTTTEEECSSSCC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccCccCcccccCCCCceEEcCCCCc
Confidence 5899999876 33445678999999999999999999875433333457999999999999999888889999999999
Q ss_pred cccccccCCCCcCCCCCCccccCCcc
Q 010445 113 AYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 113 ~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+||++|+.|++..+|.+.|+|+.|..
T Consensus 82 ~yH~~Cl~ppl~~~P~g~W~C~~C~~ 107 (114)
T 2kwj_A 82 GYHMYCLNPPVAEPPEGSWSCHLCWE 107 (114)
T ss_dssp EEETTTSSSCCSSCCSSCCCCHHHHH
T ss_pred cccccccCCCccCCCCCCeECccccc
Confidence 99999999999999999999998864
No 3
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.83 E-value=2.5e-21 Score=169.81 Aligned_cols=107 Identities=25% Similarity=0.724 Sum_probs=90.1
Q ss_pred cccccccccccccc-CCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCCcCcccccCC-CCcceEEcCC
Q 010445 32 NTNVMCRLCFVGEN-EGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCRICEICRRTG-DPNKFMFCRR 109 (510)
Q Consensus 32 ~~~~~C~vC~~~G~-~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~~C~vC~~~g-d~~~lL~Cd~ 109 (510)
.+.++|.+|.+.+. +.++.+++||.|++|++.||++||++.......+..+.|+|++|++|.+|+..+ +++.||.|+.
T Consensus 3 ~p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~~~~~~~~ll~Cd~ 82 (112)
T 3v43_A 3 EPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLFCDS 82 (112)
T ss_dssp CCCSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCCBTTTCCCCCTTCCCEECTT
T ss_pred ccCccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCCccccccCcCCCccceEEcCC
Confidence 35679999998753 334567799999999999999999976443333345899999999999999875 4458999999
Q ss_pred CCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 110 CDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 110 C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
|+++||++|+.|++..+|.+.|+|+.|..
T Consensus 83 C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 83 CDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp TCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred CCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 99999999999999999999999999963
No 4
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.49 E-value=1.3e-14 Score=126.49 Aligned_cols=96 Identities=25% Similarity=0.609 Sum_probs=77.6
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcccccCCCCCCCCCCccccccCcccccccccccc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFV 170 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~C~~Cg~~~pgk~~s~rW~~~~~lC~~C~~~~~ 170 (510)
+|.+|+..++...||.|+.|++.||..|+.+++..++.+.|+|+.|..|..|+...
T Consensus 9 ~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~~C~~C~~~~------------------------ 64 (111)
T 2ysm_A 9 NCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKVCQNCKQSG------------------------ 64 (111)
T ss_dssp CBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTCCCTTTCCCS------------------------
T ss_pred CCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCCcccccCccC------------------------
Confidence 78999999877788999999999999999998877788999999998776666421
Q ss_pred ccccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 171 KGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 171 kg~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
+...||.|+.|+++||..|+.+... ..+...|+|+.|+.-
T Consensus 65 ---------------~~~~ll~Cd~C~~~yH~~Cl~ppl~------~~P~g~W~C~~C~~c 104 (111)
T 2ysm_A 65 ---------------EDSKMLVCDTCDKGYHTFCLQPVMK------SVPTNGWKCKNCRIC 104 (111)
T ss_dssp ---------------CCTTEEECSSSCCEEEGGGSSSCCS------SCCSSCCCCHHHHCC
T ss_pred ---------------CCCCeeECCCCCcHHhHHhcCCccc------cCCCCCcCCcCCcCc
Confidence 1246899999999999999984211 224578999999753
No 5
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.39 E-value=2.9e-13 Score=118.19 Aligned_cols=86 Identities=23% Similarity=0.544 Sum_probs=74.2
Q ss_pred CCccccccccccccccCCccCCCCcEEeC--CCCCcchhhhcCCCccccccCCCCCcCCCCCCcCcccccCCCCcceEEc
Q 010445 30 QSNTNVMCRLCFVGENEGCERARRMLSCK--SCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCRICEICRRTGDPNKFMFC 107 (510)
Q Consensus 30 ~~~~~~~C~vC~~~G~~gs~~~eeLL~C~--~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~~C~vC~~~gd~~~lL~C 107 (510)
...++++|.+|+.+| +||.|+ .|++.||..||++... +.+.|.|+.| .|.+|++... ++|
T Consensus 11 ~~~~~~~C~~C~~~G--------~ll~CD~~~Cp~~fH~~Cl~L~~~-----P~g~W~Cp~c-~C~~C~k~~~----~~C 72 (107)
T 4gne_A 11 KQMHEDYCFQCGDGG--------ELVMCDKKDCPKAYHLLCLNLTQP-----PYGKWECPWH-QCDECSSAAV----SFC 72 (107)
T ss_dssp CCSSCSSCTTTCCCS--------EEEECCSTTCCCEECTGGGTCSSC-----CSSCCCCGGG-BCTTTCSBCC----EEC
T ss_pred cCCCCCCCCcCCCCC--------cEeEECCCCCCcccccccCcCCcC-----CCCCEECCCC-CCCcCCCCCC----cCc
Confidence 345668999999766 899999 8999999999995432 3489999999 6999998763 899
Q ss_pred CCCCCcccccccCCCCcCCCCCCccc
Q 010445 108 RRCDAAYHCYCQHPPHKNVSSGPYLC 133 (510)
Q Consensus 108 d~C~~~YH~~CL~P~l~~ip~~~W~C 133 (510)
..|+++||..|+.+.+...+...|+|
T Consensus 73 ~~Cp~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 73 EFCPHSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp SSSSCEECTTTCTTSCEECTTTTCEE
T ss_pred CCCCcchhhhccCCcceecCCCCcee
Confidence 99999999999999998888999987
No 6
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.34 E-value=4.7e-13 Score=117.21 Aligned_cols=88 Identities=23% Similarity=0.482 Sum_probs=67.3
Q ss_pred CCCcceEEcCCCCCcccccccCCC--C-cCCCCCCccccCCcccccCCCCCCCCCCccccccCccccccccccccccccc
Q 010445 99 GDPNKFMFCRRCDAAYHCYCQHPP--H-KNVSSGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYC 175 (510)
Q Consensus 99 gd~~~lL~Cd~C~~~YH~~CL~P~--l-~~ip~~~W~Cp~C~~C~~Cg~~~pgk~~s~rW~~~~~lC~~C~~~~~kg~~C 175 (510)
+..+.||.|+.|++.||.+||+.. + ..++.+.|+|+.|..|..|+...
T Consensus 21 g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~~~----------------------------- 71 (112)
T 3v43_A 21 KKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQG----------------------------- 71 (112)
T ss_dssp SCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCCBTTTCCCC-----------------------------
T ss_pred CCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCCccccccCcC-----------------------------
Confidence 455689999999999999999853 2 24578899999998777776421
Q ss_pred cccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCC
Q 010445 176 PVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 230 (510)
Q Consensus 176 pVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~ 230 (510)
.+...||.|+.|+++||..|+.+.- ...+.+.|+|+.|+.
T Consensus 72 ---------~~~~~ll~Cd~C~~~yH~~Cl~p~l------~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 72 ---------KNADNMLFCDSCDRGFHMECCDPPL------TRMPKGMWICQICRP 111 (112)
T ss_dssp ---------CTTCCCEECTTTCCEECGGGCSSCC------SSCCSSCCCCTTTSC
T ss_pred ---------CCccceEEcCCCCCeeecccCCCCC------CCCCCCCeECCCCCC
Confidence 1235699999999999999996321 123567999999984
No 7
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=2.1e-12 Score=106.47 Aligned_cols=55 Identities=36% Similarity=0.950 Sum_probs=52.0
Q ss_pred CCcCCCCCCcCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCC-CccccCCc
Q 010445 82 SSWKCPSCRICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSG-PYLCPKHT 137 (510)
Q Consensus 82 ~~W~C~~C~~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~-~W~Cp~C~ 137 (510)
..|.|++| +|.+|++..+.+.||+|+.|+++||++||+|++..+|.+ .|+|+.|.
T Consensus 20 ~~w~C~~c-~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~ 75 (77)
T 2e6s_A 20 PEKKCHSC-SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCK 75 (77)
T ss_dssp SSSCCSSS-SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTC
T ss_pred CCeECCCC-CCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCcc
Confidence 56999999 999999988888999999999999999999999999999 99999996
No 8
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.32 E-value=5.7e-13 Score=117.08 Aligned_cols=87 Identities=22% Similarity=0.503 Sum_probs=68.2
Q ss_pred CCCcceEEcCCCCCcccccccCCCCc---CCCCCCccccCCcccccCCCCCCCCCCccccccCccccccccccccccccc
Q 010445 99 GDPNKFMFCRRCDAAYHCYCQHPPHK---NVSSGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYC 175 (510)
Q Consensus 99 gd~~~lL~Cd~C~~~YH~~CL~P~l~---~ip~~~W~Cp~C~~C~~Cg~~~pgk~~s~rW~~~~~lC~~C~~~~~kg~~C 175 (510)
++.+.||.|+.|++.||..|+++... .++.+.|+|+.|..|..|+...
T Consensus 18 g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~~----------------------------- 68 (114)
T 2kwj_A 18 GRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSE----------------------------- 68 (114)
T ss_dssp CCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGCCCTTTTCCT-----------------------------
T ss_pred CCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccCccCcccccC-----------------------------
Confidence 44568999999999999999997643 3567899999998777776421
Q ss_pred cccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCC
Q 010445 176 PVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 230 (510)
Q Consensus 176 pVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~ 230 (510)
+++.||.|+.|+++||..|+.+.. ...+.+.|+|+.|+.
T Consensus 69 ----------~~~~ll~Cd~C~~~yH~~Cl~ppl------~~~P~g~W~C~~C~~ 107 (114)
T 2kwj_A 69 ----------NDDQLLFCDDCDRGYHMYCLNPPV------AEPPEGSWSCHLCWE 107 (114)
T ss_dssp ----------TTTTEEECSSSCCEEETTTSSSCC------SSCCSSCCCCHHHHH
T ss_pred ----------CCCceEEcCCCCccccccccCCCc------cCCCCCCeECccccc
Confidence 245799999999999999998421 123567899999964
No 9
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=99.30 E-value=1.8e-12 Score=104.95 Aligned_cols=56 Identities=36% Similarity=0.948 Sum_probs=52.9
Q ss_pred CCcCCCCCCcCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCC-CccccCCcc
Q 010445 82 SSWKCPSCRICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSG-PYLCPKHTK 138 (510)
Q Consensus 82 ~~W~C~~C~~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~-~W~Cp~C~~ 138 (510)
..|.|++| .|.+|++..+.+.||.|+.|+++||++||+|++..+|.+ .|+|+.|..
T Consensus 12 ~~w~C~~C-~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 12 VNRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp TTSCCTTT-SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCeECCCC-CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 68999999 999999988888999999999999999999999999999 999999973
No 10
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=99.27 E-value=2.7e-12 Score=105.86 Aligned_cols=56 Identities=36% Similarity=0.946 Sum_probs=52.7
Q ss_pred CCcCCCCCCcCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCC-ccccCCcc
Q 010445 82 SSWKCPSCRICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGP-YLCPKHTK 138 (510)
Q Consensus 82 ~~W~C~~C~~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~-W~Cp~C~~ 138 (510)
..|+|++| .|.+|++..+++.||+|+.|+++||++|+.|++..+|.+. |+|+.|..
T Consensus 20 ~~W~C~~C-~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 20 VNRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp TTSCCTTT-SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred CCCCCCCC-cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 67999999 9999999998889999999999999999999999999998 99999973
No 11
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.14 E-value=1.5e-11 Score=104.55 Aligned_cols=58 Identities=34% Similarity=0.828 Sum_probs=54.5
Q ss_pred CCCcCCCCCCcCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 81 WSSWKCPSCRICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 81 ~~~W~C~~C~~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
...|.|.++.+|.+|+..++++.||.|+.|+++||+.|+.|++..+|.+.|+|+.|..
T Consensus 8 ~s~~~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~ 65 (92)
T 2e6r_A 8 HSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCIL 65 (92)
T ss_dssp CCCCCCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHH
T ss_pred CchhhccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcC
Confidence 3689999999999999998778999999999999999999999999999999999975
No 12
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.06 E-value=6e-11 Score=89.72 Aligned_cols=48 Identities=31% Similarity=0.971 Sum_probs=44.7
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
.|.+|++.++.+.||.|+.|+++||+.|+.|++..+|.+.|+|+.|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 588999888888999999999999999999999999999999999974
No 13
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=99.00 E-value=1.9e-10 Score=112.11 Aligned_cols=56 Identities=36% Similarity=0.948 Sum_probs=48.5
Q ss_pred CCcCCCCCCcCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCC-CccccCCcc
Q 010445 82 SSWKCPSCRICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSG-PYLCPKHTK 138 (510)
Q Consensus 82 ~~W~C~~C~~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~-~W~Cp~C~~ 138 (510)
..|.|..| .|.+|+...+.+.||+|+.|+++||+.|+.||+..+|.+ .|+||.|..
T Consensus 168 ~~w~C~~c-~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 168 VNRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TTSCCTTT-SCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred cCEecCCC-CCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 57999999 999999988888999999999999999999999999998 999999963
No 14
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.99 E-value=3.7e-10 Score=98.60 Aligned_cols=67 Identities=27% Similarity=0.719 Sum_probs=57.3
Q ss_pred cCcccccCCCCcceEEcC--CCCCcccccccCCCCcCCCCCCccccCCcccccCCCCCCCCCCccccccCcccccccccc
Q 010445 91 ICEICRRTGDPNKFMFCR--RCDAAYHCYCQHPPHKNVSSGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRL 168 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd--~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~C~~Cg~~~pgk~~s~rW~~~~~lC~~C~~~ 168 (510)
+|.+|+..+ .||.|+ .|+++||+.|++ +..+|.+.|+||.|. |..|++..
T Consensus 17 ~C~~C~~~G---~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~-C~~C~k~~---------------------- 68 (107)
T 4gne_A 17 YCFQCGDGG---ELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQ-CDECSSAA---------------------- 68 (107)
T ss_dssp SCTTTCCCS---EEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGB-CTTTCSBC----------------------
T ss_pred CCCcCCCCC---cEeEECCCCCCcccccccCc--CCcCCCCCEECCCCC-CCcCCCCC----------------------
Confidence 677888666 899999 899999999998 788999999999998 77777531
Q ss_pred ccccccccccccccCCCCCCCceeccCcCCcccccCCC
Q 010445 169 FVKGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDG 206 (510)
Q Consensus 169 ~~kg~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~ 206 (510)
-+.|..|+..||.+|..
T Consensus 69 ---------------------~~~C~~Cp~sfC~~c~~ 85 (107)
T 4gne_A 69 ---------------------VSFCEFCPHSFCKDHEK 85 (107)
T ss_dssp ---------------------CEECSSSSCEECTTTCT
T ss_pred ---------------------CcCcCCCCcchhhhccC
Confidence 16789999999999987
No 15
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=98.92 E-value=3e-10 Score=107.71 Aligned_cols=63 Identities=37% Similarity=0.922 Sum_probs=51.7
Q ss_pred ccccccccccccCCCC-CCCceeccCcCCcccccCCCCchHHHhhhcc-CCCCceeCCCCCCCCC
Q 010445 171 KGNYCPVCLKVYRDSE-STPMVCCDVCQRWVHCQCDGISDEKYLQFQV-DGNLQYRCPTCRGECY 233 (510)
Q Consensus 171 kg~~CpVC~r~Y~d~e-~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~-~~~~~Y~C~~Cr~~~~ 233 (510)
+|+|||+|.+.|.+++ +..||+|+.|..|||..|++++++.++.+.. +....|.|+.|+....
T Consensus 1 ~G~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 1 SGNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp -CCBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred CcCcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 4789999999998875 6789999999999999999999887776532 2234799999997644
No 16
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.91 E-value=1.1e-09 Score=92.43 Aligned_cols=55 Identities=22% Similarity=0.593 Sum_probs=49.9
Q ss_pred CCCcCCCCCCcCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 81 WSSWKCPSCRICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 81 ~~~W~C~~C~~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
...|...+-.+|.+|+.++ .||.|+.|+++||++|+.|++..+|.+.|+|+.|..
T Consensus 17 ~~~~~d~n~~~C~vC~~~g---~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~ 71 (88)
T 1fp0_A 17 EFGTLDDSATICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHV 71 (88)
T ss_dssp CCCSSSSSSSCCSSSCSSS---CCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCC
T ss_pred cccccCCCCCcCcCcCCCC---CEEECCCCCCceecccCCCCCCCCcCCCcCCccccC
Confidence 3677777777999999887 799999999999999999999999999999999986
No 17
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.88 E-value=1e-09 Score=86.31 Aligned_cols=45 Identities=33% Similarity=1.026 Sum_probs=40.8
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+|.+|+..+ .||.|+.|+++||++|+.|++..+|.+.|+|+.|..
T Consensus 11 ~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~ 55 (61)
T 1mm2_A 11 FCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 55 (61)
T ss_dssp SCTTTCCCS---SCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTT
T ss_pred cCCCCCCCC---CEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcC
Confidence 677777655 799999999999999999999999999999999974
No 18
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.85 E-value=7.4e-10 Score=85.55 Aligned_cols=44 Identities=34% Similarity=1.099 Sum_probs=39.9
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 137 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~ 137 (510)
+|.+|+..+ .||.|+.|+++||+.|+.|++..+|.+.|+|+.|.
T Consensus 11 ~C~vC~~~g---~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~ 54 (56)
T 2yql_A 11 FCSVCRKSG---QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 54 (56)
T ss_dssp SCSSSCCSS---CCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHH
T ss_pred CCccCCCCC---eEEEcCCCCcceECccCCCCcCCCCCCceEChhhh
Confidence 567777765 89999999999999999999999999999999986
No 19
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.84 E-value=1e-09 Score=87.93 Aligned_cols=45 Identities=22% Similarity=0.590 Sum_probs=40.4
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
.|.+|++.+ .||.|+.|+++||++|+.|++..+|.+.|+|+.|..
T Consensus 14 ~C~vC~~~~---~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~ 58 (66)
T 2lri_C 14 RCGVCGDGT---DVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSG 58 (66)
T ss_dssp CCTTTSCCT---TCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTT
T ss_pred CcCCCCCCC---eEEECCCCCCceecccCCCccCcCCCCCEECccccC
Confidence 577777665 799999999999999999999999999999999974
No 20
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.82 E-value=1.9e-09 Score=84.75 Aligned_cols=46 Identities=33% Similarity=0.922 Sum_probs=41.5
Q ss_pred CcCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 90 RICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 90 ~~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
.+|.+|+..+ .||.|+.|+++||+.|+.|++..+|.+.|+|+.|..
T Consensus 12 ~~C~vC~~~g---~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 12 DYCEVCQQGG---EIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp SSCTTTSCCS---SEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CCCccCCCCC---cEEECCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 4777888765 899999999999999999999999999999999974
No 21
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.81 E-value=1.2e-09 Score=85.35 Aligned_cols=45 Identities=33% Similarity=1.078 Sum_probs=40.8
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+|.+|+..+ .||.|+.|+++||+.|+.|++..+|.+.|+|+.|..
T Consensus 7 ~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~ 51 (60)
T 2puy_A 7 FCSVCRKSG---QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 51 (60)
T ss_dssp SCTTTCCCS---SCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHH
T ss_pred CCcCCCCCC---cEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccC
Confidence 677788765 899999999999999999999999999999999864
No 22
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.81 E-value=1.3e-09 Score=86.93 Aligned_cols=45 Identities=31% Similarity=0.890 Sum_probs=40.7
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+|.+|+..+ .||.|+.|+++||+.|+.|++..+|.+.|+|+.|..
T Consensus 10 ~C~vC~~~g---~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~ 54 (66)
T 1xwh_A 10 ECAVCRDGG---ELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQ 54 (66)
T ss_dssp SBSSSSCCS---SCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHH
T ss_pred CCccCCCCC---CEEEcCCCChhhcccccCCCcCcCCCCCeECccccC
Confidence 567777665 799999999999999999999999999999999975
No 23
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.77 E-value=7.7e-09 Score=87.30 Aligned_cols=63 Identities=19% Similarity=0.483 Sum_probs=49.0
Q ss_pred cccccCCCccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCCcCccccc
Q 010445 24 AGEEQGQSNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCRICEICRR 97 (510)
Q Consensus 24 ~~~e~~~~~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~~C~vC~~ 97 (510)
+..+.....+++.|.+|+.+| +||+|+.|.++||..||.|++...| .+.|+|+.|......+.
T Consensus 15 ~~~~~~~d~n~~~C~vC~~~g--------~LL~CD~C~~~fH~~Cl~PpL~~~P---~g~W~C~~C~~~~~~ke 77 (88)
T 1fp0_A 15 IDEFGTLDDSATICRVCQKPG--------DLVMCNQCEFCFHLDCHLPALQDVP---GEEWSCSLCHVLPDLKE 77 (88)
T ss_dssp CCCCCSSSSSSSCCSSSCSSS--------CCEECTTSSCEECTTSSSTTCCCCC---SSSCCCCSCCCCCSSCC
T ss_pred cccccccCCCCCcCcCcCCCC--------CEEECCCCCCceecccCCCCCCCCc---CCCcCCccccCCCccch
Confidence 334444455678999999876 8999999999999999999876544 48999999976655543
No 24
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.72 E-value=3.1e-09 Score=89.47 Aligned_cols=49 Identities=24% Similarity=0.634 Sum_probs=42.7
Q ss_pred CcCcccccCCC--CcceEEcCCCCCcccccccCCCCcC----CCCCCccccCCcc
Q 010445 90 RICEICRRTGD--PNKFMFCRRCDAAYHCYCQHPPHKN----VSSGPYLCPKHTK 138 (510)
Q Consensus 90 ~~C~vC~~~gd--~~~lL~Cd~C~~~YH~~CL~P~l~~----ip~~~W~Cp~C~~ 138 (510)
.+|.+|++... .+.||+|+.|+++||++|+.|++.. +|.+.|+|+.|..
T Consensus 17 ~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~ 71 (88)
T 1wev_A 17 LACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTR 71 (88)
T ss_dssp CSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHH
T ss_pred CcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccc
Confidence 37888887754 3589999999999999999999984 8999999999986
No 25
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.71 E-value=9.7e-09 Score=82.21 Aligned_cols=48 Identities=25% Similarity=0.622 Sum_probs=40.1
Q ss_pred ccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 32 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 32 ~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
.+...|.+|+.++ +||+|+.|.+.||..||.|++...+ .+.|+|+.|.
T Consensus 10 ~~~~~C~vC~~~~--------~ll~Cd~C~~~~H~~Cl~P~l~~~P---~g~W~C~~C~ 57 (66)
T 2lri_C 10 APGARCGVCGDGT--------DVLRCTHCAAAFHWRCHFPAGTSRP---GTGLRCRSCS 57 (66)
T ss_dssp CTTCCCTTTSCCT--------TCEECSSSCCEECHHHHCTTTCCCC---SSSCCCTTTT
T ss_pred CCCCCcCCCCCCC--------eEEECCCCCCceecccCCCccCcCC---CCCEECcccc
Confidence 3456899998765 8999999999999999999876544 4899999884
No 26
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.69 E-value=3.2e-09 Score=84.13 Aligned_cols=48 Identities=29% Similarity=0.852 Sum_probs=41.2
Q ss_pred cCcccccC--CCCcceEEcCCCCCcccccccCCCCcC--C-CCCCccccCCcc
Q 010445 91 ICEICRRT--GDPNKFMFCRRCDAAYHCYCQHPPHKN--V-SSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~--gd~~~lL~Cd~C~~~YH~~CL~P~l~~--i-p~~~W~Cp~C~~ 138 (510)
+|.+|+.. .+.+.||+|+.|+++||+.|+.|++.. + |.+.|+|+.|..
T Consensus 8 ~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~ 60 (66)
T 2yt5_A 8 VCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVF 60 (66)
T ss_dssp CBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcC
Confidence 78888876 334689999999999999999999876 3 889999999975
No 27
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.68 E-value=1e-08 Score=80.54 Aligned_cols=48 Identities=31% Similarity=0.813 Sum_probs=40.3
Q ss_pred ccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 32 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 32 ~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
.++.+|.+|..++ +||.|+.|.++||..||.+++...+ .+.|+|+.|.
T Consensus 7 ~~~~~C~vC~~~g--------~ll~Cd~C~~~fH~~Cl~ppl~~~p---~g~W~C~~C~ 54 (61)
T 1mm2_A 7 HHMEFCRVCKDGG--------ELLCCDTCPSSYHIHCLNPPLPEIP---NGEWLCPRCT 54 (61)
T ss_dssp SSCSSCTTTCCCS--------SCBCCSSSCCCBCSSSSSSCCSSCC---SSCCCCTTTT
T ss_pred CCCCcCCCCCCCC--------CEEEcCCCCHHHcccccCCCcCcCC---CCccCChhhc
Confidence 4567999999765 8999999999999999998765443 4899999984
No 28
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=98.68 E-value=5.8e-09 Score=91.16 Aligned_cols=109 Identities=18% Similarity=0.354 Sum_probs=69.8
Q ss_pred CCCcCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcccccCCCCCCCCCCccccccCccccccccc
Q 010445 88 SCRICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGR 167 (510)
Q Consensus 88 ~C~~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~C~~Cg~~~pgk~~s~rW~~~~~lC~~C~~ 167 (510)
+|.+|.+|++.. |+.|...||+.|++++ .|.|..|..+..++.. ...|..|
T Consensus 6 rC~~C~~C~~~~-------C~~C~~c~~~~~~~~~-------~~~~~~c~~~~~~~~~-------------~~~~~~c-- 56 (117)
T 4bbq_A 6 RCRKCKACVQGE-------CGVCHYCRDMKKFGGP-------GRMKQSCVLRQCLAPR-------------LPHSVTC-- 56 (117)
T ss_dssp CCSCSHHHHSCC-------CSCSHHHHHSGGGTSC-------CCSCCCCGGGCCSSCB-------------CCTTCBC--
T ss_pred cCCcCcCcCCcC-------CCCCCCCcCCcccCCC-------Cccccchhheeecccc-------------ccccccc--
Confidence 578888998753 9999999999998864 5888888754333211 1112222
Q ss_pred cccccccccccccccCC-CCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCCC
Q 010445 168 LFVKGNYCPVCLKVYRD-SESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 232 (510)
Q Consensus 168 ~~~kg~~CpVC~r~Y~d-~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~~ 232 (510)
.+|..|...+.+ .....||+|+.|..|||..|+++..+.+. ..+....|.|+.|+..+
T Consensus 57 -----~~c~~c~~c~~~~~~~~~m~~C~~C~~~~H~~C~~~~~~~~~--~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 57 -----SLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGLL--NEELPNCWECPKCYQED 115 (117)
T ss_dssp -----TTTCCBCCHHHHCCGGGSCEEETTTCCEECGGGCCSCCCCEE--CSSSSSEEECTTTC---
T ss_pred -----cccCcccccccccccCcceEEeeecCCeEECCCCCCCccccc--cccCCCCeECCCCcCCC
Confidence 244555554432 22456999999999999999997544321 11223469999998754
No 29
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.60 E-value=7.6e-09 Score=83.94 Aligned_cols=47 Identities=30% Similarity=0.750 Sum_probs=40.7
Q ss_pred CcCcccccCC--CCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 90 RICEICRRTG--DPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 90 ~~C~vC~~~g--d~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
.+|.+|+..+ +++.||+|+.|+++||++|++|+. +|.+.|+|+.|..
T Consensus 17 ~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~--vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 17 AVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQ 65 (71)
T ss_dssp CSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS--CCSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc--CCCCCcCCccCcC
Confidence 4788888775 567999999999999999999864 8899999999874
No 30
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.59 E-value=2.5e-08 Score=78.34 Aligned_cols=48 Identities=27% Similarity=0.814 Sum_probs=40.0
Q ss_pred ccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 32 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 32 ~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
.++.+|.+|..++ +||.|+.|.+.||..||.++....+ .+.|+|+.|.
T Consensus 9 ~~~~~C~vC~~~g--------~ll~CD~C~~~fH~~Cl~p~l~~~p---~g~W~C~~C~ 56 (61)
T 2l5u_A 9 DHQDYCEVCQQGG--------EIILCDTCPRAYHMVCLDPDMEKAP---EGKWSCPHCE 56 (61)
T ss_dssp CCCSSCTTTSCCS--------SEEECSSSSCEEEHHHHCTTCCSCC---CSSCCCTTGG
T ss_pred CCCCCCccCCCCC--------cEEECCCCChhhhhhccCCCCCCCC---CCceECcccc
Confidence 3457999999865 8999999999999999999765433 4899999884
No 31
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.59 E-value=1.5e-08 Score=80.70 Aligned_cols=48 Identities=25% Similarity=0.744 Sum_probs=40.3
Q ss_pred ccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 32 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 32 ~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
.++.+|.+|..++ +||.|+.|.+.||..||.|++...+ .+.|+|+.|.
T Consensus 6 ~~~~~C~vC~~~g--------~ll~CD~C~~~fH~~Cl~ppl~~~P---~g~W~C~~C~ 53 (66)
T 1xwh_A 6 KNEDECAVCRDGG--------ELICCDGCPRAFHLACLSPPLREIP---SGTWRCSSCL 53 (66)
T ss_dssp SCCCSBSSSSCCS--------SCEECSSCCCEECTTTSSSCCSSCC---SSCCCCHHHH
T ss_pred CCCCCCccCCCCC--------CEEEcCCCChhhcccccCCCcCcCC---CCCeECcccc
Confidence 4668999999865 8999999999999999998765443 4899998873
No 32
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.58 E-value=1.4e-08 Score=78.37 Aligned_cols=49 Identities=29% Similarity=0.786 Sum_probs=40.6
Q ss_pred CccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 31 SNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 31 ~~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
..++.+|.+|+.++ +||.|+.|.+.||..||.|++...+ .+.|+|+.|.
T Consensus 6 ~~~~~~C~vC~~~g--------~ll~Cd~C~~~~H~~Cl~ppl~~~p---~g~W~C~~C~ 54 (56)
T 2yql_A 6 SGHEDFCSVCRKSG--------QLLMCDTCSRVYHLDCLDPPLKTIP---KGMWICPRCQ 54 (56)
T ss_dssp CSSCCSCSSSCCSS--------CCEECSSSSCEECSSSSSSCCCSCC---CSSCCCHHHH
T ss_pred CCCCCCCccCCCCC--------eEEEcCCCCcceECccCCCCcCCCC---CCceEChhhh
Confidence 44567999999865 8999999999999999998765443 4899999873
No 33
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.58 E-value=3.3e-08 Score=74.57 Aligned_cols=47 Identities=26% Similarity=0.791 Sum_probs=38.7
Q ss_pred ccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 36 MCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 36 ~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
.|.+|+..++ .++||.|+.|.+.||..|+.|++...| .+.|+|+.|.
T Consensus 2 ~C~vC~~~~~-----~~~ll~Cd~C~~~~H~~Cl~p~l~~~P---~g~W~C~~C~ 48 (51)
T 1f62_A 2 RCKVCRKKGE-----DDKLILCDECNKAFHLFCLRPALYEVP---DGEWQCPACQ 48 (51)
T ss_dssp CCTTTCCSSC-----CSCCEECTTTCCEECHHHHCTTCCSCC---SSCCSCTTTS
T ss_pred CCCCCCCCCC-----CCCEEECCCCChhhCcccCCCCcCCCC---CCcEECcCcc
Confidence 6899998663 348999999999999999998765443 4899999985
No 34
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.57 E-value=1.6e-08 Score=78.95 Aligned_cols=48 Identities=27% Similarity=0.765 Sum_probs=40.2
Q ss_pred ccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 32 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 32 ~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
.++.+|.+|+.+| +||.|+.|.+.||..|+.|++...| .+.|+|+.|.
T Consensus 3 ~~~~~C~vC~~~g--------~ll~Cd~C~~~fH~~Cl~ppl~~~p---~g~W~C~~C~ 50 (60)
T 2puy_A 3 IHEDFCSVCRKSG--------QLLMCDTCSRVYHLDCLDPPLKTIP---KGMWICPRCQ 50 (60)
T ss_dssp CCCSSCTTTCCCS--------SCEECSSSSCEECGGGSSSCCSSCC---CSCCCCHHHH
T ss_pred CCCCCCcCCCCCC--------cEEEcCCCCcCEECCcCCCCcCCCC---CCceEChhcc
Confidence 3567999999865 8999999999999999998765443 4899999873
No 35
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=98.57 E-value=6.4e-09 Score=83.02 Aligned_cols=54 Identities=26% Similarity=0.776 Sum_probs=46.6
Q ss_pred cccccccccCCCCCCCceecc-CcCCcccccCCCCchHHHhhhccCCCCceeCCCCC
Q 010445 174 YCPVCLKVYRDSESTPMVCCD-VCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCR 229 (510)
Q Consensus 174 ~CpVC~r~Y~d~e~~~mLqCd-~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr 229 (510)
.|++|.+.|.+. ..||+|| .|..|||..|++++.+.|..+...+...|+|+.|.
T Consensus 10 ~C~~C~~p~~~~--~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 10 PCGICTNEVNDD--QDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp BCTTTCSBCCTT--SCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred cCccCCCccCCC--CCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 589999998763 4799999 99999999999999988888765566799999885
No 36
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.57 E-value=2.2e-08 Score=81.30 Aligned_cols=48 Identities=27% Similarity=0.593 Sum_probs=42.0
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+|.+|+++.+...||.|+.|+.|||..|++++...++.+.|+|+.|..
T Consensus 20 ~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~ 67 (75)
T 2k16_A 20 ICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 67 (75)
T ss_dssp CBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHH
T ss_pred CCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccC
Confidence 577788887666899999999999999999988777788999999975
No 37
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.56 E-value=1e-08 Score=86.43 Aligned_cols=46 Identities=30% Similarity=0.771 Sum_probs=40.2
Q ss_pred cCcccccCC--CCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTG--DPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~g--d~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+|.+|+..+ +.+.||+|+.|+++||+.|++|++ +|.+.|+|+.|..
T Consensus 27 ~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~--vP~g~W~C~~C~~ 74 (88)
T 2l43_A 27 VCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQ 74 (88)
T ss_dssp CCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS--CCSSCCCCHHHHH
T ss_pred cCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc--cCCCceECccccC
Confidence 677888776 556899999999999999999874 7899999999975
No 38
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=98.54 E-value=3.8e-08 Score=92.47 Aligned_cols=45 Identities=27% Similarity=0.837 Sum_probs=41.4
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+|.+|+.+| .||.|+.|+++||..|+.|++..+|.+.|+|+.|..
T Consensus 6 ~C~~C~~~g---~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~ 50 (184)
T 3o36_A 6 WCAVCQNGG---ELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRD 50 (184)
T ss_dssp SCTTTCCCS---SCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSC
T ss_pred ccccCCCCC---eeeecCCCCcccCccccCCCCCCCCCCCEECccccC
Confidence 677888776 699999999999999999999999999999999986
No 39
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=98.51 E-value=4.2e-08 Score=93.96 Aligned_cols=45 Identities=24% Similarity=0.792 Sum_probs=41.5
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+|.+|+.++ .||.|+.|+++||..|+.|++..+|.+.|+||.|..
T Consensus 9 ~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~ 53 (207)
T 3u5n_A 9 WCAVCQNGG---DLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRD 53 (207)
T ss_dssp SBTTTCCCE---EEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSC
T ss_pred CCCCCCCCC---ceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeC
Confidence 677888776 799999999999999999999999999999999986
No 40
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.49 E-value=2e-08 Score=79.49 Aligned_cols=57 Identities=25% Similarity=0.607 Sum_probs=42.0
Q ss_pred CccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 31 SNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 31 ~~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
+.++.+|.+|+.+. +...+.||+|+.|.++||+.|+.|++...+....+.|+|+.|.
T Consensus 3 ~~~~~~C~vC~~~~---~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~ 59 (66)
T 2yt5_A 3 SGSSGVCTICQEEY---SEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCV 59 (66)
T ss_dssp CCCCCCBSSSCCCC---CBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHH
T ss_pred CCCCCCCCCCCCCC---CCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCc
Confidence 44567999999763 1223499999999999999999997643211134899999874
No 41
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.49 E-value=2.4e-08 Score=86.61 Aligned_cols=56 Identities=23% Similarity=0.713 Sum_probs=47.6
Q ss_pred cccccccccCCCCCCCceecc-CcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 174 YCPVCLKVYRDSESTPMVCCD-VCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 174 ~CpVC~r~Y~d~e~~~mLqCd-~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
.|++|.+.|.+ ...||+|+ .|..|||..|++++.+.+..+...++..|+|+.|+..
T Consensus 5 ~C~iC~~p~~~--~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~ 61 (105)
T 2xb1_A 5 PCGACRSEVND--DQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKT 61 (105)
T ss_dssp BCTTTCSBCCT--TSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHT
T ss_pred CCCCCCCccCC--CCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCc
Confidence 69999999976 35699998 9999999999999988887765455679999999864
No 42
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.48 E-value=4.5e-08 Score=83.01 Aligned_cols=54 Identities=28% Similarity=0.725 Sum_probs=42.9
Q ss_pred CCCccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 29 GQSNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 29 ~~~~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
....+..+|.+|...++ .+.||.|+.|.+.||+.||.|++...| .+.|+|+.|.
T Consensus 11 ~~~~~~~~C~vC~~~~~-----~~~ll~CD~C~~~~H~~Cl~Ppl~~~P---~g~W~C~~C~ 64 (92)
T 2e6r_A 11 AQFIDSYICQVCSRGDE-----DDKLLFCDGCDDNYHIFCLLPPLPEIP---RGIWRCPKCI 64 (92)
T ss_dssp CCCCCCCCCSSSCCSGG-----GGGCEECTTTCCEECSSSSSSCCSSCC---SSCCCCHHHH
T ss_pred hhccCCCCCccCCCcCC-----CCCEEEcCCCCchhccccCCCCcccCC---CCCcCCccCc
Confidence 33445679999998763 248999999999999999998775443 4899999984
No 43
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.47 E-value=2.8e-08 Score=78.27 Aligned_cols=54 Identities=30% Similarity=0.839 Sum_probs=42.5
Q ss_pred ccccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 171 KGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 171 kg~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
...||++|.+.|.+ +..||+|+.|..|||..|+++..+.... ...|+|+.|+..
T Consensus 5 e~~~C~~C~~~~~~--~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~-----~~~~~C~~C~~k 58 (64)
T 1we9_A 5 SSGQCGACGESYAA--DEFWICCDLCEMWFHGKCVKITPARAEH-----IKQYKCPSCSNK 58 (64)
T ss_dssp SCCCCSSSCCCCCS--SSCEEECSSSCCEEETTTTTCCTTGGGG-----CSSCCCHHHHTT
T ss_pred CCCCCCCCCCccCC--CCCEEEccCCCCCCCccccCcChhHhcC-----CCcEECCCCcCc
Confidence 35689999998854 4679999999999999999987543311 247999999764
No 44
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.47 E-value=7e-08 Score=91.60 Aligned_cols=45 Identities=24% Similarity=0.826 Sum_probs=41.9
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
.|.+|+.++ .+|.|+.|+++||..|+.|++..+|.+.|+|+.|..
T Consensus 4 ~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~ 48 (189)
T 2ro1_A 4 ICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHV 48 (189)
T ss_dssp CBTTTCCCS---SCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSC
T ss_pred cCccCCCCC---ceeECCCCCchhccccCCCCcccCCCCCCCCcCccC
Confidence 688898777 699999999999999999999999999999999985
No 45
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=98.44 E-value=1e-07 Score=89.57 Aligned_cols=48 Identities=29% Similarity=0.692 Sum_probs=40.5
Q ss_pred ccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 32 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 32 ~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
.++++|.+|+.+| +||+|+.|.++||..|+.|+....+ .+.|.|+.|+
T Consensus 2 ~~~~~C~~C~~~g--------~ll~Cd~C~~~~H~~C~~p~l~~~p---~~~W~C~~C~ 49 (184)
T 3o36_A 2 PNEDWCAVCQNGG--------ELLCCEKCPKVFHLSCHVPTLTNFP---SGEWICTFCR 49 (184)
T ss_dssp CSCSSCTTTCCCS--------SCEECSSSSCEECTTTSSSCCSSCC---SSCCCCTTTS
T ss_pred CCCCccccCCCCC--------eeeecCCCCcccCccccCCCCCCCC---CCCEECcccc
Confidence 3567999999876 8999999999999999999876443 4889999874
No 46
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.43 E-value=5.9e-08 Score=81.68 Aligned_cols=53 Identities=23% Similarity=0.619 Sum_probs=41.4
Q ss_pred CCCccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCC
Q 010445 29 GQSNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 89 (510)
Q Consensus 29 ~~~~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C 89 (510)
....++.+|.+|..++ +...++||+|+.|..+||+.|++++.. +.+.|+|+.|
T Consensus 20 ~~~~~~~~C~vC~~~~---s~~~~~ll~CD~C~~~fH~~Cl~p~~v-----P~g~W~C~~C 72 (88)
T 2l43_A 20 SLIDEDAVCSICMDGE---SQNSNVILFCDMCNLAVHQECYGVPYI-----PEGQWLCRHC 72 (88)
T ss_dssp CCCCCCCCCSSCCSSS---SCSEEEEEECSSSCCCCCHHHHTCSSC-----CSSCCCCHHH
T ss_pred CcCCCCCcCCcCCCCC---CCCCCCEEECCCCCchhhcccCCCCcc-----CCCceECccc
Confidence 3344668999999865 123459999999999999999999742 3489999987
No 47
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.40 E-value=8.7e-08 Score=77.71 Aligned_cols=52 Identities=23% Similarity=0.624 Sum_probs=41.0
Q ss_pred CccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 31 SNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 31 ~~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
..++.+|.+|+.++ +...++||+|+.|.++||+.|++++.. +.+.|+|+.|.
T Consensus 13 ~~~~~~C~vC~~~~---s~~~~~ll~CD~C~~~~H~~Cl~~~~v-----P~g~W~C~~C~ 64 (71)
T 2ku3_A 13 IDEDAVCSICMDGE---SQNSNVILFCDMCNLAVHQECYGVPYI-----PEGQWLCRHCL 64 (71)
T ss_dssp CCSSCSCSSSCCCC---CCSSSCEEECSSSCCEEEHHHHTCSSC-----CSSCCCCHHHH
T ss_pred CCCCCCCCCCCCCC---CCCCCCEEECCCCCCccccccCCCCcC-----CCCCcCCccCc
Confidence 34567999999865 234559999999999999999999742 34899999873
No 48
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.40 E-value=6.4e-08 Score=81.38 Aligned_cols=55 Identities=20% Similarity=0.596 Sum_probs=41.6
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccc-cCCCCCcCCCCCC
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRD-LFHWSSWKCPSCR 90 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~-~~~~~~W~C~~C~ 90 (510)
.+.+|.+|+.+.. ...+.||+|+.|.++||+.||.|++...+ .+..+.|+|+.|.
T Consensus 15 ~~~~C~vC~~~~~---~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~ 70 (88)
T 1wev_A 15 MGLACVVCRQMTV---ASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCT 70 (88)
T ss_dssp HCCSCSSSCCCCC---CTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHH
T ss_pred CCCcCCCCCCCCC---CCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCcccc
Confidence 4569999998642 12348999999999999999999875311 1245899999884
No 49
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=98.38 E-value=1.5e-07 Score=90.21 Aligned_cols=48 Identities=27% Similarity=0.656 Sum_probs=40.5
Q ss_pred ccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 32 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 32 ~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
.++++|.+|+.+| +||+|++|.++||..|+.|+....| .+.|.|+.|.
T Consensus 5 ~~~~~C~~C~~~g--------~ll~Cd~C~~~~H~~Cl~p~l~~~p---~~~W~C~~C~ 52 (207)
T 3u5n_A 5 PNEDWCAVCQNGG--------DLLCCEKCPKVFHLTCHVPTLLSFP---SGDWICTFCR 52 (207)
T ss_dssp SSCSSBTTTCCCE--------EEEECSSSSCEECTTTSSSCCSSCC---SSCCCCTTTS
T ss_pred CCCCCCCCCCCCC--------ceEEcCCCCCccCCccCCCCCCCCC---CCCEEeCcee
Confidence 3557999999876 7999999999999999999876443 4899999875
No 50
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.37 E-value=2.2e-07 Score=76.45 Aligned_cols=50 Identities=30% Similarity=0.680 Sum_probs=39.8
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCC-CcCCCCCC
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWS-SWKCPSCR 90 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~-~W~C~~C~ 90 (510)
.+.+|.+|+..++ .++||.|+.|.+.||+.||+|++...| .+ .|+|+.|.
T Consensus 25 ~~c~C~vC~~~~~-----~~~ll~CD~C~~~yH~~Cl~Ppl~~~P---~g~~W~C~~C~ 75 (77)
T 2e6s_A 25 HSCSCRVCGGKHE-----PNMQLLCDECNVAYHIYCLNPPLDKVP---EEEYWYCPSCK 75 (77)
T ss_dssp SSSSCSSSCCCCC-----STTEEECSSSCCEEETTSSSSCCSSCC---CSSCCCCTTTC
T ss_pred CCCCCcCcCCcCC-----CCCEEEcCCCCccccccccCCCccCCC---CCCCcCCcCcc
Confidence 4458888887542 349999999999999999999876544 36 89999984
No 51
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.34 E-value=2.6e-07 Score=74.56 Aligned_cols=47 Identities=30% Similarity=0.758 Sum_probs=37.1
Q ss_pred ccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCC-CcCCCCCC
Q 010445 36 MCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWS-SWKCPSCR 90 (510)
Q Consensus 36 ~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~-~W~C~~C~ 90 (510)
.|.+|+..++ .+.||.|+.|.+.||+.||+|++...| .+ .|+|+.|.
T Consensus 20 ~C~~C~~~~~-----~~~ll~CD~C~~~yH~~Cl~Ppl~~~P---~g~~W~C~~C~ 67 (70)
T 3asl_A 20 ACHLCGGRQD-----PDKQLMCDECDMAFHIYCLDPPLSSVP---SEDEWYCPECR 67 (70)
T ss_dssp SBTTTCCCSC-----GGGEEECTTTCCEEEGGGSSSCCSSCC---SSSCCCCTTTS
T ss_pred CCcCCCCcCC-----CCCEEEcCCCCCceecccCCCCcCCCC---CCCCcCCcCcc
Confidence 5677775432 349999999999999999998876544 36 99999984
No 52
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.33 E-value=3.1e-07 Score=78.66 Aligned_cols=44 Identities=25% Similarity=0.588 Sum_probs=37.4
Q ss_pred ccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 94 ICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 94 vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+|+...+...||.|+.|++|||..|++|++..+|. .|+|+.|..
T Consensus 32 iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~-~w~C~~C~~ 75 (98)
T 2lv9_A 32 ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPD-TYLCERCQP 75 (98)
T ss_dssp TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCS-SBCCTTTSS
T ss_pred ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCC-CEECCCCcC
Confidence 56666666689999999999999999998877774 799999964
No 53
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.29 E-value=5.7e-08 Score=88.65 Aligned_cols=45 Identities=18% Similarity=0.447 Sum_probs=40.2
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcC-------CCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKN-------VSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~-------ip~~~W~Cp~C~~ 138 (510)
+|.+|+.+| .++.|+.|+++||..|+.|++.. .|.+.|.|+.|..
T Consensus 65 ~C~vC~~GG---~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 65 QCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp SCSSSCCCS---SEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred eecccCCCC---cEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 899999888 79999999999999999988752 4889999999974
No 54
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=98.24 E-value=4.3e-07 Score=69.04 Aligned_cols=47 Identities=34% Similarity=0.723 Sum_probs=37.1
Q ss_pred ccccccccCCCCCCCceecc-CcCCcccccCCCCchHHHhhhccCCCCceeCCCCC
Q 010445 175 CPVCLKVYRDSESTPMVCCD-VCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCR 229 (510)
Q Consensus 175 CpVC~r~Y~d~e~~~mLqCd-~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr 229 (510)
|.+|.+.|.+ +..||+|+ .|..|||..|++++.+... ...|+|+.|+
T Consensus 5 cc~C~~p~~~--~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~------~~~~~C~~C~ 52 (52)
T 2kgg_A 5 AQNCQRPCKD--KVDWVQCDGGCDEWFHQVCVGVSPEMAE------NEDYICINCA 52 (52)
T ss_dssp CTTCCCCCCT--TCCEEECTTTTCCEEETTTTTCCHHHHH------HSCCCCSCC-
T ss_pred CCCCcCccCC--CCcEEEeCCCCCccCcccccCCCccccC------CCCEECCCCC
Confidence 6688888854 46799999 8999999999998765432 1479999985
No 55
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.24 E-value=4.3e-07 Score=86.15 Aligned_cols=46 Identities=24% Similarity=0.672 Sum_probs=39.3
Q ss_pred ccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
++.|.+|+.+| +||+|++|.++||..|+.|+....+ .+.|.|+.|.
T Consensus 2 ~~~C~~C~~~g--------~ll~Cd~C~~~~H~~Cl~p~l~~~p---~g~W~C~~C~ 47 (189)
T 2ro1_A 2 ATICRVCQKPG--------DLVMCNQCEFCFHLDCHLPALQDVP---GEEWSCSLCH 47 (189)
T ss_dssp CCCBTTTCCCS--------SCCCCTTTCCBCCSTTSTTCCSSCC---CTTCCTTTTS
T ss_pred CCcCccCCCCC--------ceeECCCCCchhccccCCCCcccCC---CCCCCCcCcc
Confidence 46899999876 8999999999999999998765443 4899999984
No 56
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.23 E-value=3.9e-07 Score=74.82 Aligned_cols=51 Identities=35% Similarity=0.886 Sum_probs=40.9
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
.|| +|.+.|.+ +..||+|+.|..|||..|+++..+... ....|+|+.|+..
T Consensus 13 ~~C-~C~~~~d~--~~~MIqCd~C~~WfH~~Cvgl~~~~~~-----~~~~~~C~~C~~~ 63 (79)
T 1wep_A 13 VYC-LCRQPYNV--NHFMIECGLCQDWFHGSCVGIEEENAV-----DIDIYHCPDCEAV 63 (79)
T ss_dssp CCS-TTSCSCCS--SSCEEEBTTTCCEEEHHHHTCCHHHHT-----TCSBBCCTTTTTT
T ss_pred cEE-EcCCccCC--CCceEEcCCCCCcEEeeecCccccccc-----CCCeEECCCcccc
Confidence 478 89988743 568999999999999999998765532 2358999999875
No 57
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.21 E-value=6.2e-07 Score=73.82 Aligned_cols=47 Identities=30% Similarity=0.751 Sum_probs=36.6
Q ss_pred ccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCC-cCCCCCC
Q 010445 36 MCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSS-WKCPSCR 90 (510)
Q Consensus 36 ~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~-W~C~~C~ 90 (510)
.|.+|+..+ ..+.||+|+.|.++||..||.|++...+. +. |+|+.|+
T Consensus 28 ~C~vC~~~~-----d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~---g~~W~C~~C~ 75 (77)
T 3shb_A 28 ACHLCGGRQ-----DPDKQLMCDECDMAFHIYCLDPPLSSVPS---EDEWYCPECR 75 (77)
T ss_dssp SBTTTCCCS-----CGGGEEECTTTCCEEETTTSSSCCSSCCS---SSCCCCTTTC
T ss_pred cCCccCCCC-----CCcceeEeCCCCCccCcccCCCcccCCCC---CCceECcCcc
Confidence 566666544 34589999999999999999998765443 66 9999985
No 58
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.12 E-value=1.9e-06 Score=69.79 Aligned_cols=50 Identities=26% Similarity=0.664 Sum_probs=40.1
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
...+|.+|....+ .+.||.|+.|.+.||..|++++..+.+ .+.|+|+.|.
T Consensus 17 ~~~~C~~C~~~~~-----~~~mi~CD~C~~wfH~~Cv~~~~~~~~---~~~w~C~~C~ 66 (75)
T 2k16_A 17 QIWICPGCNKPDD-----GSPMIGCDDCDDWYHWPCVGIMAAPPE---EMQWFCPKCA 66 (75)
T ss_dssp EEECBTTTTBCCS-----SCCEEECSSSSSEEEHHHHTCSSCCCS---SSCCCCTTTH
T ss_pred CCcCCCCCCCCCC-----CCCEEEcCCCCcccccccCCCCccCCC---CCCEEChhcc
Confidence 4568999988652 247999999999999999999865443 3789999884
No 59
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.11 E-value=2.8e-07 Score=75.08 Aligned_cols=54 Identities=33% Similarity=0.851 Sum_probs=40.9
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
.|| +|.+.|. +..||+|+.|..|||..|+++..+....+.. ....|+|+.|+..
T Consensus 17 ~~C-~C~~~~~---~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~-~~~~~~C~~C~~~ 70 (76)
T 1wem_A 17 LYC-ICRQPHN---NRFMICCDRCEEWFHGDCVGISEARGRLLER-NGEDYICPNCTIL 70 (76)
T ss_dssp CCS-TTCCCCC---SSCEEECSSSCCEEEHHHHSCCHHHHHHHHH-HTCCCCCHHHHHH
T ss_pred CEE-ECCCccC---CCCEEEeCCCCCcEeCeEEccchhhhhhccC-CCCeEECcCCcCc
Confidence 477 7888774 4579999999999999999988765443321 2358999999753
No 60
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.07 E-value=2.3e-06 Score=69.29 Aligned_cols=44 Identities=20% Similarity=0.717 Sum_probs=36.5
Q ss_pred cCcccccCCCCcceEEcCC--CC-CcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRR--CD-AAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~--C~-~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+| +|++... ..||.|+. |+ .|||..|++ +...|.+.|+||.|..
T Consensus 18 ~C-~C~~~~~-g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~ 64 (71)
T 1wen_A 18 YC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 64 (71)
T ss_dssp CS-TTCCCSC-SSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSS
T ss_pred EE-ECCCCCC-CCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCc
Confidence 66 6887644 47999999 77 699999999 6677889999999974
No 61
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.04 E-value=9.6e-07 Score=80.59 Aligned_cols=54 Identities=19% Similarity=0.623 Sum_probs=42.4
Q ss_pred CCCccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccc---c-CCCCCcCCCCCC
Q 010445 29 GQSNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRD---L-FHWSSWKCPSCR 90 (510)
Q Consensus 29 ~~~~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~---~-~~~~~W~C~~C~ 90 (510)
+...++++|.+|..+| +||+|++|++.||..||.++..+.. . .+.+.|.|+.|.
T Consensus 58 d~Dg~~d~C~vC~~GG--------~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~ 115 (142)
T 2lbm_A 58 DSDGMDEQCRWCAEGG--------NLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICH 115 (142)
T ss_dssp CTTSCBCSCSSSCCCS--------SEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTC
T ss_pred cCCCCCCeecccCCCC--------cEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeeccc
Confidence 3455678999999988 9999999999999999998764210 0 234899999884
No 62
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=98.03 E-value=1.2e-06 Score=70.33 Aligned_cols=48 Identities=31% Similarity=0.908 Sum_probs=37.6
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
.|| +|++.+. +..||+|+.|..|||..|+++..+. + ...|+|+.|+..
T Consensus 20 ~~C-iC~~~~~---~~~MIqCd~C~~WfH~~Cvgi~~~~-----~--~~~~~C~~C~~s 67 (68)
T 3o70_A 20 VTC-FCMKPFA---GRPMIECNECHTWIHLSCAKIRKSN-----V--PEVFVCQKCRDS 67 (68)
T ss_dssp CCS-TTCCCCT---TCCEEECTTTCCEEETTTTTCCTTS-----C--CSSCCCHHHHTC
T ss_pred eEe-ECCCcCC---CCCEEECCCCCccccccccCcCccc-----C--CCcEECCCCCCC
Confidence 478 8888664 5679999999999999999986531 1 248999999753
No 63
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.01 E-value=1.9e-06 Score=84.03 Aligned_cols=49 Identities=29% Similarity=0.712 Sum_probs=36.1
Q ss_pred ccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCC-CcCCCCCC
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWS-SWKCPSCR 90 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~-~W~C~~C~ 90 (510)
...|.+|+..++ .+.||+|+.|.++||..||+|++...| .+ .|+|+.|.
T Consensus 174 ~c~C~vC~~~~~-----~~~lL~CD~C~~~yH~~CL~PPL~~vP---~G~~W~Cp~C~ 223 (226)
T 3ask_A 174 VCACHLCGGRQD-----PDKQLMCDECDMAFHIYCLDPPLSSVP---SEDEWYCPECR 223 (226)
T ss_dssp TTSCSSSCCCCC-------CCEECSSSCCEECSCC--CCCCSCC---SSSCCCCGGGC
T ss_pred CCCCcCCCCCCC-----CCCeEEcCCCCcceeCccCCCCcccCC---CCCCCCCcCCc
Confidence 446888877542 349999999999999999999876544 36 89999984
No 64
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=97.99 E-value=1.9e-06 Score=75.10 Aligned_cols=95 Identities=21% Similarity=0.340 Sum_probs=59.7
Q ss_pred cccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcccccc------C---CCCCcCCCCCCcCcccccCCC-Ccce
Q 010445 35 VMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDL------F---HWSSWKCPSCRICEICRRTGD-PNKF 104 (510)
Q Consensus 35 ~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~------~---~~~~W~C~~C~~C~vC~~~gd-~~~l 104 (510)
..|.+|..-+.. -|+.|...||..|++.+...... . ....+.|..|..|..|....+ +..|
T Consensus 5 ~rC~~C~~C~~~---------~C~~C~~c~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~c~~c~~c~~c~~~~~~~~~m 75 (117)
T 4bbq_A 5 VRCRKCKACVQG---------ECGVCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKL 75 (117)
T ss_dssp BCCSCSHHHHSC---------CCSCSHHHHHSGGGTSCCCSCCCCGGGCCSSCBCCTTCBCTTTCCBCCHHHHCCGGGSC
T ss_pred ccCCcCcCcCCc---------CCCCCCCCcCCcccCCCCccccchhheeeccccccccccccccCcccccccccccCcce
Confidence 467777665421 29999999999999876432110 0 011233333344444443333 3468
Q ss_pred EEcCCCCCcccccccCCCCcCCC----CCCccccCCcc
Q 010445 105 MFCRRCDAAYHCYCQHPPHKNVS----SGPYLCPKHTK 138 (510)
Q Consensus 105 L~Cd~C~~~YH~~CL~P~l~~ip----~~~W~Cp~C~~ 138 (510)
|.|+.|..+||..|+.+....+. ...|.||.|..
T Consensus 76 ~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~ 113 (117)
T 4bbq_A 76 MECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQ 113 (117)
T ss_dssp EEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC-
T ss_pred EEeeecCCeEECCCCCCCccccccccCCCCeECCCCcC
Confidence 99999999999999997654432 34599999974
No 65
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.96 E-value=4.1e-06 Score=71.03 Aligned_cols=44 Identities=20% Similarity=0.717 Sum_probs=36.1
Q ss_pred cCcccccCCCCcceEEcCC--CC-CcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRR--CD-AAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~--C~-~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+| +|++... ..||.|+. |+ .|||..|+. +...|.+.|+||.|..
T Consensus 38 yC-iC~~~~~-g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~ 84 (91)
T 1weu_A 38 YC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 84 (91)
T ss_dssp CS-TTCCBCC-SCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCC
T ss_pred EE-ECCCCCC-CCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccC
Confidence 56 7777543 47999999 77 799999999 6667789999999974
No 66
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=97.95 E-value=1.8e-06 Score=67.56 Aligned_cols=44 Identities=20% Similarity=0.717 Sum_probs=36.2
Q ss_pred cCcccccCCCCcceEEcCC--CC-CcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRR--CD-AAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~--C~-~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+| +|+++.. ..||.|+. |+ .|||..|++ +..+|.+.|+||.|..
T Consensus 12 ~C-~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 12 YC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp ET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred EE-ECCCcCC-CCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccC
Confidence 56 6887654 48999999 66 899999999 6777889999998863
No 67
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.93 E-value=1.9e-06 Score=69.58 Aligned_cols=49 Identities=29% Similarity=0.632 Sum_probs=37.1
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 230 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~ 230 (510)
.|| +|.+.+.+ +..||+|+.|..|||..|+++.... .....|+|+.|+.
T Consensus 17 ~~C-~C~~~~~~--g~~mI~Cd~C~~W~H~~Cvg~~~~~------~~~~~~~C~~C~~ 65 (72)
T 1wee_A 17 VDC-KCGTKDDD--GERMLACDGCGVWHHTRCIGINNAD------ALPSKFLCFRCIE 65 (72)
T ss_dssp ECC-TTCCCSCC--SSCEEECSSSCEEEETTTTTCCTTS------CCCSCCCCHHHHH
T ss_pred eEe-eCCCccCC--CCcEEECCCCCCccCCeeeccCccc------cCCCcEECCCccC
Confidence 367 58886633 4579999999999999999986421 1235899999975
No 68
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.93 E-value=1.2e-06 Score=81.15 Aligned_cols=53 Identities=32% Similarity=0.762 Sum_probs=41.4
Q ss_pred ccccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 171 KGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 171 kg~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
...|| +|++.|.+ ++.||+|+.|+.|||..|+++..... .....|.|+.|+..
T Consensus 7 ~~~~C-~C~~~~~~--~~~mi~Cd~C~~WfH~~Cv~~~~~~~-----~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 7 TKLYC-ICKTPEDE--SKFYIGCDRCQNWYHGRCVGILQSEA-----ELIDEYVCPQCQST 59 (174)
T ss_dssp CCEET-TTTEECCT--TSCEEECTTTCCEEEHHHHTCCHHHH-----TTCSSCCCHHHHHH
T ss_pred CCcEe-eCCCCCCC--CCCEeECCCCCchhChhhcCCchhhc-----cCccCeecCCCcch
Confidence 34589 99998743 56899999999999999999865432 22458999999853
No 69
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=97.92 E-value=2e-06 Score=67.17 Aligned_cols=44 Identities=20% Similarity=0.713 Sum_probs=36.0
Q ss_pred cCcccccCCCCcceEEcCC--CC-CcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRR--CD-AAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~--C~-~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+| +|+++.. ..|+.|+. |+ .|||..|++ +...|.+.|+||.|..
T Consensus 11 yC-~C~~~~~-g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 11 YC-LCHQVSY-GEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp ET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred EE-ECCCCCC-CCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccC
Confidence 56 7887543 47999999 77 699999999 6677889999998863
No 70
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=97.85 E-value=3.2e-06 Score=66.73 Aligned_cols=44 Identities=23% Similarity=0.662 Sum_probs=35.5
Q ss_pred cCcccccCCCCcceEEcCC--CC-CcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRR--CD-AAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~--C~-~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+| +|++... ..|+.|+. |+ .|||..|++ +...|.+.|+||.|..
T Consensus 13 yC-~C~~~~~-g~MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 13 YC-LCNQVSY-GEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRG 59 (62)
T ss_dssp ET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHT
T ss_pred EE-ECCCCCC-CCeeeeeCCCCCcccEecccCC--cCcCCCCCEECcCccc
Confidence 56 7887543 37999999 55 999999999 5566789999999864
No 71
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=97.85 E-value=5.6e-06 Score=70.09 Aligned_cols=43 Identities=23% Similarity=0.550 Sum_probs=35.0
Q ss_pred cCcccccCCCCcceEEcCCCC---CcccccccCCCCcCCCCCCccccC-Cc
Q 010445 91 ICEICRRTGDPNKFMFCRRCD---AAYHCYCQHPPHKNVSSGPYLCPK-HT 137 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~---~~YH~~CL~P~l~~ip~~~W~Cp~-C~ 137 (510)
+| +|++.... .||.|+.|+ .|||..|++ +...|.+.|+||. |.
T Consensus 28 yC-iC~~~~~g-~MI~CD~c~C~~eWfH~~CVg--l~~~p~~~W~Cp~cC~ 74 (90)
T 2jmi_A 28 YC-FCRNVSYG-PMVACDNPACPFEWFHYGCVG--LKQAPKGKWYCSKDCK 74 (90)
T ss_dssp CS-TTTCCCSS-SEECCCSSSCSCSCEETTTSS--CSSCTTSCCCSSHHHH
T ss_pred EE-EeCCCCCC-CEEEecCCCCccccCcCccCC--CCcCCCCCccCChhhc
Confidence 56 67765443 699999976 899999999 5667789999999 75
No 72
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=97.83 E-value=1.2e-06 Score=71.29 Aligned_cols=50 Identities=36% Similarity=0.877 Sum_probs=37.8
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 230 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~ 230 (510)
.|| +|.+.|.+ +..||+|+.|..|||..|+++..+... ....|+|+.|+.
T Consensus 11 ~yC-iC~~~~~~--~~~MI~Cd~C~~WfH~~Cvg~~~~~~~-----~~~~~~C~~C~~ 60 (75)
T 3kqi_A 11 VYC-VCRLPYDV--TRFMIECDACKDWFHGSCVGVEEEEAP-----DIDIYHCPNCEK 60 (75)
T ss_dssp EET-TTTEECCT--TSCEEECTTTCCEEEHHHHTCCTTTGG-----GBSSCCCHHHHH
T ss_pred eEE-ECCCcCCC--CCCEEEcCCCCCCEecccccccccccC-----CCCEEECCCCcc
Confidence 366 78887743 567999999999999999998654211 124799999974
No 73
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=97.81 E-value=9.4e-07 Score=79.45 Aligned_cols=45 Identities=18% Similarity=0.493 Sum_probs=38.7
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCc-----CC--CCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHK-----NV--SSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~-----~i--p~~~W~Cp~C~~ 138 (510)
+|.+|+.+| .++.|+.|+++||..|+.|++. .+ +.+.|.|+.|..
T Consensus 59 ~C~vC~dGG---~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 59 QCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp SCTTTCCCS---EEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred cCeecCCCC---eeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 788899888 8999999999999999998743 33 789999999973
No 74
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=97.81 E-value=7.7e-06 Score=65.63 Aligned_cols=46 Identities=22% Similarity=0.543 Sum_probs=37.5
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+| +|+++.+...|+.|+.|..|||..|++.....++ ..|+|+.|..
T Consensus 21 ~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~-~~~~C~~C~~ 66 (68)
T 3o70_A 21 TC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRD 66 (68)
T ss_dssp CS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCC-SSCCCHHHHT
T ss_pred Ee-ECCCcCCCCCEEECCCCCccccccccCcCcccCC-CcEECCCCCC
Confidence 55 7888776667999999999999999997655444 6899998863
No 75
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=97.80 E-value=4.8e-06 Score=63.16 Aligned_cols=46 Identities=33% Similarity=0.962 Sum_probs=35.4
Q ss_pred cccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCC
Q 010445 174 YCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 230 (510)
Q Consensus 174 ~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~ 230 (510)
|| +|++.+. +..||+|+.|..|||..|+++..+. + ...|+|+.|+.
T Consensus 6 ~C-~C~~~~~---~~~MI~Cd~C~~W~H~~Cvgi~~~~-----~--~~~~~C~~C~~ 51 (52)
T 3o7a_A 6 TC-FCMKPFA---GRPMIECNECHTWIHLSCAKIRKSN-----V--PEVFVCQKCRD 51 (52)
T ss_dssp CS-TTCCBCT---TCCEEECTTTCCEEETTTTTCCGGG-----C--CSSCCCHHHHT
T ss_pred EE-EeCCcCC---CCCEEEcCCCCccccccccCCCccc-----C--CCcEECcCCCC
Confidence 44 5776543 5689999999999999999987642 1 24899999864
No 76
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=97.79 E-value=2e-05 Score=63.72 Aligned_cols=47 Identities=28% Similarity=0.762 Sum_probs=36.0
Q ss_pred ccccccccccccccCCccCCCCcEEeCC--CC-CcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 32 NTNVMCRLCFVGENEGCERARRMLSCKS--CG-KKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 32 ~~~~~C~vC~~~G~~gs~~~eeLL~C~~--C~-~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
....+| +|+.... ..||.|+. |. ..||..|+++...+ .+.|+|+.|.
T Consensus 14 ~~~~~C-~C~~~~~------g~MI~CD~~~C~~~wfH~~Cvgl~~~p-----~g~w~Cp~C~ 63 (71)
T 1wen_A 14 NEPTYC-LCHQVSY------GEMIGCDNPDCSIEWFHFACVGLTTKP-----RGKWFCPRCS 63 (71)
T ss_dssp TSCCCS-TTCCCSC------SSEECCSCSSCSCCCEETTTTTCSSCC-----SSCCCCTTTS
T ss_pred CCCCEE-ECCCCCC------CCEeEeeCCCCCCccEecccCCcCcCC-----CCCEECCCCC
Confidence 345689 7987532 28999999 87 79999999976543 2789999884
No 77
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=97.78 E-value=1.8e-05 Score=67.57 Aligned_cols=46 Identities=22% Similarity=0.585 Sum_probs=34.9
Q ss_pred cccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 35 VMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 35 ~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
..| +|+...+ .+.||.|+.|.+.||..|++++....+ ..|+|+.|+
T Consensus 29 vrC-iC~~~~~-----~~~mi~Cd~C~~w~H~~C~~~~~~~~p----~~w~C~~C~ 74 (98)
T 2lv9_A 29 TRC-ICGFTHD-----DGYMICCDKCSVWQHIDCMGIDRQHIP----DTYLCERCQ 74 (98)
T ss_dssp CCC-TTSCCSC-----SSCEEEBTTTCBEEETTTTTCCTTSCC----SSBCCTTTS
T ss_pred EEe-ECCCccC-----CCcEEEcCCCCCcCcCcCCCCCccCCC----CCEECCCCc
Confidence 356 6766542 238999999999999999999765432 479999884
No 78
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.68 E-value=1.2e-05 Score=62.99 Aligned_cols=48 Identities=19% Similarity=0.516 Sum_probs=36.8
Q ss_pred cCcccccCCC-CcceEEcCCCCCcccccccCCCCcCCC-CCCccccCCcc
Q 010445 91 ICEICRRTGD-PNKFMFCRRCDAAYHCYCQHPPHKNVS-SGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd-~~~lL~Cd~C~~~YH~~CL~P~l~~ip-~~~W~Cp~C~~ 138 (510)
+|.+|+++.+ ...|+.|+.|..|||..|++....... ...|+|+.|..
T Consensus 8 ~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 57 (64)
T 1we9_A 8 QCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSN 57 (64)
T ss_dssp CCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHT
T ss_pred CCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcC
Confidence 4557777754 357999999999999999996544332 36899999974
No 79
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.67 E-value=1.6e-05 Score=64.01 Aligned_cols=47 Identities=19% Similarity=0.496 Sum_probs=36.6
Q ss_pred cCcccccCCCCc-ceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPN-KFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~-~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+| +|+.+.+.. .|+.|+.|..|||..|++..........|+|+.|..
T Consensus 18 ~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~ 65 (72)
T 1wee_A 18 DC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIE 65 (72)
T ss_dssp CC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHH
T ss_pred Ee-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccC
Confidence 56 588775443 699999999999999999654333457899999874
No 80
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.66 E-value=3.8e-05 Score=65.13 Aligned_cols=50 Identities=26% Similarity=0.703 Sum_probs=37.7
Q ss_pred CCCccccccccccccccCCccCCCCcEEeCC--CC-CcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 29 GQSNTNVMCRLCFVGENEGCERARRMLSCKS--CG-KKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 29 ~~~~~~~~C~vC~~~G~~gs~~~eeLL~C~~--C~-~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
.......+| +|..... ..||.|+. |. ..||..|+++...+ .+.|+|+.|.
T Consensus 31 ~d~~e~~yC-iC~~~~~------g~MI~CD~~dC~~~WfH~~CVgl~~~p-----~g~W~Cp~C~ 83 (91)
T 1weu_A 31 VDPNEPTYC-LCHQVSY------GEMIGCDNPDCSIEWFHFACVGLTTKP-----RGKWFCPRCS 83 (91)
T ss_dssp CCSCCCBCS-TTCCBCC------SCCCCCSCSSCSCCCCCSTTTTCSSCC-----CSSCCCTTTC
T ss_pred cCCCCCcEE-ECCCCCC------CCEeEecCCCCCCCCEecccCCcCcCC-----CCCEECcCcc
Confidence 333455788 9987542 28999999 77 79999999986543 2789999884
No 81
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=97.64 E-value=6.3e-06 Score=65.85 Aligned_cols=51 Identities=27% Similarity=0.626 Sum_probs=34.4
Q ss_pred cccccccccCCCCCCCceecc--CcCCcccccCCCCchHHHhhhccCCCCceeCCCCCC
Q 010445 174 YCPVCLKVYRDSESTPMVCCD--VCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 230 (510)
Q Consensus 174 ~CpVC~r~Y~d~e~~~mLqCd--~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~ 230 (510)
+| +|+... +.+.||+|+ .|..|||..|+++..+.... ..-...|+|+.|+.
T Consensus 12 ~C-~C~~~~---~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~--~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 12 RC-ICSSTM---VNDSMIQCEDQRCQVWQHLNCVLIPDKPGES--AEVPPVFYCELCRL 64 (68)
T ss_dssp CC-TTCCCS---CCSCEEECSCTTTCEEEETTTSCCCSSTTSC--CCCCSSCCCHHHHH
T ss_pred Ee-ECCCCc---CCCCEEEECCCCCCCeEchhhCCCCcccccc--cCCCCcEECcCccC
Confidence 46 576532 346799999 49999999999976432211 11123799999973
No 82
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.53 E-value=1.8e-05 Score=63.87 Aligned_cols=44 Identities=25% Similarity=0.621 Sum_probs=34.7
Q ss_pred cCcccccCCCCcceEEcCCCC---CcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCD---AAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~---~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
+| +|++... ..|+.|+.|+ .|||..|+. +...|.+.|+||.|..
T Consensus 8 yC-~C~~~~~-g~MI~CD~cdC~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~ 54 (70)
T 1x4i_A 8 YC-ICNQVSY-GEMVGCDNQDCPIEWFHYGCVG--LTEAPKGKWYCPQCTA 54 (70)
T ss_dssp CS-TTSCCCC-SSEECCSCTTCSCCCEEHHHHT--CSSCCSSCCCCHHHHH
T ss_pred EE-EcCCCCC-CCEeEeCCCCCCccCCcccccc--cCcCCCCCEECCCCCc
Confidence 45 3776543 3899999975 899999999 4556789999999874
No 83
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=97.52 E-value=2e-05 Score=59.77 Aligned_cols=47 Identities=19% Similarity=0.497 Sum_probs=35.6
Q ss_pred cCcccccCCC-CcceEEcC-CCCCcccccccCCCCcCCCCCCccccCCc
Q 010445 91 ICEICRRTGD-PNKFMFCR-RCDAAYHCYCQHPPHKNVSSGPYLCPKHT 137 (510)
Q Consensus 91 ~C~vC~~~gd-~~~lL~Cd-~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~ 137 (510)
.|-+|+++.+ ...|+.|+ .|..|||..|++..........|+|+.|.
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 3558888875 35799999 89999999999964433224789999884
No 84
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=97.50 E-value=1.9e-05 Score=70.98 Aligned_cols=54 Identities=20% Similarity=0.656 Sum_probs=41.4
Q ss_pred CCCccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcccc---ccC-CCCCcCCCCCC
Q 010445 29 GQSNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNR---DLF-HWSSWKCPSCR 90 (510)
Q Consensus 29 ~~~~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~---~~~-~~~~W~C~~C~ 90 (510)
+...++++|.+|..+| +|++|+.|++.||..||.+...+. ... +.+.|.|..|.
T Consensus 52 d~Dg~~~~C~vC~dGG--------~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~ 109 (129)
T 3ql9_A 52 DSDGMDEQCRWCAEGG--------NLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICH 109 (129)
T ss_dssp CTTSCBSSCTTTCCCS--------EEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTC
T ss_pred CCCCCCCcCeecCCCC--------eeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcC
Confidence 4455678999999987 999999999999999999753211 111 34899999883
No 85
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.42 E-value=1.3e-05 Score=65.13 Aligned_cols=47 Identities=28% Similarity=0.698 Sum_probs=36.9
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCC-----CCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNV-----SSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~i-----p~~~W~Cp~C~~ 138 (510)
+| +|+++.+...|+.|+.|..|||..|++...... ....|+|+.|..
T Consensus 18 ~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~ 69 (76)
T 1wem_A 18 YC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTI 69 (76)
T ss_dssp CS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHH
T ss_pred EE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcC
Confidence 55 788877666899999999999999999643321 357899999874
No 86
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=97.39 E-value=6.7e-05 Score=56.77 Aligned_cols=43 Identities=21% Similarity=0.492 Sum_probs=35.6
Q ss_pred ccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCc
Q 010445 94 ICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 137 (510)
Q Consensus 94 vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~ 137 (510)
+|+++.+...|+.|+.|..|||..|++.....++ ..|+|+.|.
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~-~~~~C~~C~ 50 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCR 50 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCC-SSCCCHHHH
T ss_pred EeCCcCCCCCEEEcCCCCccccccccCCCcccCC-CcEECcCCC
Confidence 6887776668999999999999999997654443 689999885
No 87
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=97.38 E-value=4.3e-05 Score=59.72 Aligned_cols=45 Identities=27% Similarity=0.768 Sum_probs=34.6
Q ss_pred ccccccccccccCCccCCCCcEEeCC--CC-CcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCKS--CG-KKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~~--C~-~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
...| +|+.... +.||.|+. |. ..||..|+++...+ .+.|.|+.|.
T Consensus 10 ~~~C-~C~~~~~------g~mi~CD~cdC~~~wfH~~Cvgl~~~p-----~g~w~C~~C~ 57 (60)
T 2vnf_A 10 PTYC-LCHQVSY------GEMIGCDNPDCSIEWFHFACVGLTTKP-----RGKWFCPRCS 57 (60)
T ss_dssp CEET-TTTEECC------SEEEECSCTTCSSCEEETGGGTCSSCC-----SSCCCCHHHH
T ss_pred CCEE-ECCCcCC------CCEEEeCCCCCCCceEehhcCCCCcCC-----CCCEECcCcc
Confidence 4578 8987542 28999999 66 89999999976543 2789999873
No 88
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=97.37 E-value=4.4e-05 Score=60.19 Aligned_cols=46 Identities=28% Similarity=0.744 Sum_probs=35.3
Q ss_pred cccccccccccccCCccCCCCcEEeCC--CC-CcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKS--CG-KKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~--C~-~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
....| +|+.... ..||.|+. |. +.||..|+++...+ .+.|.|+.|.
T Consensus 10 e~~yC-~C~~~~~------g~MI~CD~c~C~~~WfH~~Cvgl~~~p-----~~~w~Cp~C~ 58 (62)
T 2g6q_A 10 EPTYC-LCNQVSY------GEMIGCDNEQCPIEWFHFSCVSLTYKP-----KGKWYCPKCR 58 (62)
T ss_dssp CCEET-TTTEECC------SEEEECSCTTCSSCEEETGGGTCSSCC-----SSCCCCHHHH
T ss_pred CCcEE-ECCCCCC------CCeeeeeCCCCCcccEecccCCcCcCC-----CCCEECcCcc
Confidence 34678 8988532 28999999 66 99999999986543 3789999873
No 89
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=97.37 E-value=4.4e-05 Score=59.56 Aligned_cols=46 Identities=26% Similarity=0.721 Sum_probs=35.2
Q ss_pred cccccccccccccCCccCCCCcEEeCC--CC-CcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKS--CG-KKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~--C~-~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
....| +|+.... +.||.|+. |. ..||..|+++...+ .+.|.|+.|.
T Consensus 8 e~~yC-~C~~~~~------g~mi~CD~~~C~~~wfH~~Cvgl~~~p-----~~~w~Cp~C~ 56 (59)
T 3c6w_A 8 EPTYC-LCHQVSY------GEMIGCDNPDCPIEWFHFACVDLTTKP-----KGKWFCPRCV 56 (59)
T ss_dssp CCEET-TTTEECC------SEEEECSCTTCSSCEEETGGGTCSSCC-----SSCCCCHHHH
T ss_pred CCcEE-ECCCCCC------CCeeEeeCCCCCCCCEecccCCcccCC-----CCCEECcCcc
Confidence 34578 8987542 28999999 87 79999999986543 2789999873
No 90
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=97.36 E-value=5.9e-05 Score=62.93 Aligned_cols=57 Identities=23% Similarity=0.658 Sum_probs=41.0
Q ss_pred cCCCccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc--------ccc-cCCCCCcCCCCCC
Q 010445 28 QGQSNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ--------NRD-LFHWSSWKCPSCR 90 (510)
Q Consensus 28 ~~~~~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~--------~~~-~~~~~~W~C~~C~ 90 (510)
.....++++|.+|..-+ .+.|+.|..|++.||..||....- ... ......|.|+.|.
T Consensus 9 ~e~~~~D~~C~VC~~~t------~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Ce 74 (89)
T 1wil_A 9 REPVVNDEMCDVCEVWT------AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCD 74 (89)
T ss_dssp CCCCCCSCCCTTTCCCC------SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTC
T ss_pred ccCCCCCcccCcccccc------ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccc
Confidence 34445789999999754 239999999999999999976411 111 1134799999883
No 91
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.36 E-value=3.8e-05 Score=62.94 Aligned_cols=47 Identities=23% Similarity=0.580 Sum_probs=36.6
Q ss_pred cCcccccCCC-CcceEEcCCCCCcccccccCCCCcCC-CCCCccccCCcc
Q 010445 91 ICEICRRTGD-PNKFMFCRRCDAAYHCYCQHPPHKNV-SSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd-~~~lL~Cd~C~~~YH~~CL~P~l~~i-p~~~W~Cp~C~~ 138 (510)
+| +|+++.+ ...|+.|+.|..|||..|++...... ....|+|+.|..
T Consensus 14 ~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 62 (79)
T 1wep_A 14 YC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEA 62 (79)
T ss_dssp CS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTT
T ss_pred EE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccc
Confidence 55 7888765 45899999999999999999544322 246899999975
No 92
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=97.34 E-value=6.6e-05 Score=63.51 Aligned_cols=46 Identities=22% Similarity=0.593 Sum_probs=34.9
Q ss_pred cccccccccccccCCccCCCCcEEeCCCC---CcchhhhcCCCccccccCCCCCcCCCC-CC
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCG---KKYHRNCLKNWAQNRDLFHWSSWKCPS-CR 90 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~---~~yH~~CL~~~~~~~~~~~~~~W~C~~-C~ 90 (510)
...+| +|..... ++||.|+.|. ..||..|+++...+ .+.|+|+. |.
T Consensus 25 ~~~yC-iC~~~~~------g~MI~CD~c~C~~eWfH~~CVgl~~~p-----~~~W~Cp~cC~ 74 (90)
T 2jmi_A 25 EEVYC-FCRNVSY------GPMVACDNPACPFEWFHYGCVGLKQAP-----KGKWYCSKDCK 74 (90)
T ss_dssp CSCCS-TTTCCCS------SSEECCCSSSCSCSCEETTTSSCSSCT-----TSCCCSSHHHH
T ss_pred CCcEE-EeCCCCC------CCEEEecCCCCccccCcCccCCCCcCC-----CCCccCChhhc
Confidence 34688 8987432 2799999966 89999999986543 27899998 63
No 93
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=97.29 E-value=1.8e-05 Score=63.05 Aligned_cols=47 Identities=19% Similarity=0.499 Sum_probs=36.4
Q ss_pred cCcccccCCC-CcceEEcC-CCCCcccccccCCCCcC------CCCCCccccCCc
Q 010445 91 ICEICRRTGD-PNKFMFCR-RCDAAYHCYCQHPPHKN------VSSGPYLCPKHT 137 (510)
Q Consensus 91 ~C~vC~~~gd-~~~lL~Cd-~C~~~YH~~CL~P~l~~------ip~~~W~Cp~C~ 137 (510)
.|.+|+++.+ ...|+.|+ .|..|||..|++..... .|...|+|+.|.
T Consensus 10 ~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 10 PCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp BCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred cCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 5667888754 44899999 99999999999954321 366789999885
No 94
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=97.28 E-value=4.8e-05 Score=65.82 Aligned_cols=48 Identities=21% Similarity=0.497 Sum_probs=37.0
Q ss_pred cCcccccCCC-CcceEEcC-CCCCcccccccCCCCcC------CCCCCccccCCcc
Q 010445 91 ICEICRRTGD-PNKFMFCR-RCDAAYHCYCQHPPHKN------VSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd-~~~lL~Cd-~C~~~YH~~CL~P~l~~------ip~~~W~Cp~C~~ 138 (510)
.|.+|+++.+ ...|+.|+ .|..|||..|++..... .+...|+||.|..
T Consensus 5 ~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~ 60 (105)
T 2xb1_A 5 PCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLK 60 (105)
T ss_dssp BCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHH
T ss_pred CCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccC
Confidence 5667887743 34799998 99999999999954321 3568899999985
No 95
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.26 E-value=7e-05 Score=61.28 Aligned_cols=47 Identities=21% Similarity=0.528 Sum_probs=36.4
Q ss_pred cCcccccCCCCcceEEcC--CCCCcccccccCCCCcC-----CCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCR--RCDAAYHCYCQHPPHKN-----VSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd--~C~~~YH~~CL~P~l~~-----ip~~~W~Cp~C~~ 138 (510)
+| +|+...+...|+.|+ .|..|||..|++..... .....|+|+.|..
T Consensus 18 ~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~ 71 (78)
T 1wew_A 18 RC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRL 71 (78)
T ss_dssp CC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHH
T ss_pred Ee-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCc
Confidence 56 688875556899999 99999999999954332 1236899999875
No 96
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=97.21 E-value=0.00012 Score=58.39 Aligned_cols=47 Identities=26% Similarity=0.500 Sum_probs=34.5
Q ss_pred cCcccccCCCCcceEEcC--CCCCcccccccCCCCcC----CCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCR--RCDAAYHCYCQHPPHKN----VSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd--~C~~~YH~~CL~P~l~~----ip~~~W~Cp~C~~ 138 (510)
.| +|+...+...|+.|+ .|..|||..|++..... .....|+|+.|..
T Consensus 12 ~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 12 RC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp CC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred Ee-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 44 687776667899999 59999999999843221 1224799999864
No 97
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=97.17 E-value=0.00015 Score=63.12 Aligned_cols=42 Identities=36% Similarity=0.912 Sum_probs=34.4
Q ss_pred CceeccCcCCcccccCCCCchHHHhhhcc-CCCCceeCCCCCC
Q 010445 189 PMVCCDVCQRWVHCQCDGISDEKYLQFQV-DGNLQYRCPTCRG 230 (510)
Q Consensus 189 ~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~-~~~~~Y~C~~Cr~ 230 (510)
.||+|+.|..|||..|.++.++.+..+.. +....|.|+.|..
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~ 43 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTE 43 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTT
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccc
Confidence 49999999999999999988766665554 4456899999974
No 98
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.11 E-value=4.2e-05 Score=70.77 Aligned_cols=47 Identities=28% Similarity=0.682 Sum_probs=36.3
Q ss_pred cCcccccCCC-CcceEEcCCCCCcccccccCCCCcC-CCCCCccccCCcc
Q 010445 91 ICEICRRTGD-PNKFMFCRRCDAAYHCYCQHPPHKN-VSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd-~~~lL~Cd~C~~~YH~~CL~P~l~~-ip~~~W~Cp~C~~ 138 (510)
+| +|+++.+ ...|+.|+.|.+|||..|++..... ...+.|+|+.|..
T Consensus 10 ~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~ 58 (174)
T 2ri7_A 10 YC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQS 58 (174)
T ss_dssp ET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHH
T ss_pred Ee-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcc
Confidence 56 7777654 3479999999999999999854332 3467899999975
No 99
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=96.95 E-value=9.5e-05 Score=79.49 Aligned_cols=50 Identities=34% Similarity=0.905 Sum_probs=38.6
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 230 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~ 230 (510)
.|| +|.+.|.+ ++.||+|+.|..|||..|+++..+.... ...|+|+.|+.
T Consensus 38 ~yC-~C~~~~d~--~~~MIqCd~C~~WfH~~Cvgl~~~~~~~-----~~~~~C~~C~~ 87 (488)
T 3kv5_D 38 VYC-VCRQPYDV--NRFMIECDICKDWFHGSCVGVEEHHAVD-----IDLYHCPNCAV 87 (488)
T ss_dssp EET-TTTEECCT--TSCEEEBTTTCCEEEHHHHTCCGGGGGG-----EEEBCCHHHHH
T ss_pred eEE-eCCCcCCC--CCCeEEccCCCCceeeeecCcCcccccC-----CCEEECCCCcC
Confidence 467 79887743 5689999999999999999987543211 23799999974
No 100
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=96.94 E-value=8.1e-05 Score=79.22 Aligned_cols=50 Identities=38% Similarity=0.888 Sum_probs=38.8
Q ss_pred cccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 174 YCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 174 ~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
|| +|.+.|.+ ++.||+||.|..|||..|+++..+... ....|+|+.|+..
T Consensus 7 yC-iC~~~~d~--~~~MIqCD~C~~WfH~~CVgi~~~~~~-----~~~~y~C~~C~~~ 56 (447)
T 3kv4_A 7 YC-LCRLPYDV--TRFMIECDMCQDWFHGSCVGVEEEKAA-----DIDLYHCPNCEVL 56 (447)
T ss_dssp ET-TTTEECCT--TSCEEECTTTCCEEEHHHHTCCHHHHT-----TEEECCCHHHHHH
T ss_pred EE-eCCCcCCC--CCCeEEcCCCCcccccccCCcCccccc-----CCCEEECCCCccc
Confidence 56 78887743 578999999999999999998765431 1247999999753
No 101
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.91 E-value=0.00041 Score=56.68 Aligned_cols=53 Identities=25% Similarity=0.422 Sum_probs=37.7
Q ss_pred ccccccccccccccCCccCCCCcEEeC--CCCCcchhhhcCCCcccccc--CCCCCcCCCCCC
Q 010445 32 NTNVMCRLCFVGENEGCERARRMLSCK--SCGKKYHRNCLKNWAQNRDL--FHWSSWKCPSCR 90 (510)
Q Consensus 32 ~~~~~C~vC~~~G~~gs~~~eeLL~C~--~C~~~yH~~CL~~~~~~~~~--~~~~~W~C~~C~ 90 (510)
.....| +|+.... ...||.|+ .|...||..|+++...+... .....|.|+.|+
T Consensus 14 ~~~~~C-iC~~~~~-----~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~ 70 (78)
T 1wew_A 14 EIKVRC-VCGNSLE-----TDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICR 70 (78)
T ss_dssp CCCCCC-SSCCCCC-----CSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHH
T ss_pred CCCEEe-ECCCcCC-----CCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCC
Confidence 345688 7988632 23899999 99999999999997653210 012689988763
No 102
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=96.90 E-value=0.00013 Score=59.25 Aligned_cols=47 Identities=26% Similarity=0.600 Sum_probs=36.3
Q ss_pred cCcccccCCC-CcceEEcCCCCCcccccccCCCCcCCC-CCCccccCCcc
Q 010445 91 ICEICRRTGD-PNKFMFCRRCDAAYHCYCQHPPHKNVS-SGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd-~~~lL~Cd~C~~~YH~~CL~P~l~~ip-~~~W~Cp~C~~ 138 (510)
+| +|+.+.+ ...|+.|+.|..|||..|++......+ ...|+|+.|..
T Consensus 12 yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~ 60 (75)
T 3kqi_A 12 YC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEK 60 (75)
T ss_dssp ET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHH
T ss_pred EE-ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcc
Confidence 44 7887754 458999999999999999996544333 36799999975
No 103
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=96.84 E-value=0.00064 Score=64.05 Aligned_cols=48 Identities=17% Similarity=0.481 Sum_probs=35.4
Q ss_pred CCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCCC
Q 010445 183 RDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 232 (510)
Q Consensus 183 ~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~~ 232 (510)
...++..||+|..|.+|||..|+....... ++.+....|.|..|..+.
T Consensus 13 ~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~--lp~~~fY~F~C~~C~~~g 60 (177)
T 3rsn_A 13 GRQLGEVELQCGICTKWFTADTFGIDTSSC--LPFMTNYSFHCNVCHHSG 60 (177)
T ss_dssp TCCTTSCEEECTTTCCEEEGGGGTCCCTTC--CTTCCSEEEECTTTSTTS
T ss_pred CCCCCceeEeeccccceecHHHhcccccCc--cccceeEEEEccccCCCC
Confidence 334577899999999999999998433111 223456799999999764
No 104
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.79 E-value=0.00039 Score=56.00 Aligned_cols=45 Identities=22% Similarity=0.572 Sum_probs=33.9
Q ss_pred ccccccccccccCCccCCCCcEEeCCCC---CcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCKSCG---KKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~~C~---~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
..+|. |..... +.||.|+.|. ..||..|+++...+ .+.|+|+.|.
T Consensus 6 ~~yC~-C~~~~~------g~MI~CD~cdC~~~WfH~~Cvgl~~~p-----~~~w~Cp~C~ 53 (70)
T 1x4i_A 6 SGYCI-CNQVSY------GEMVGCDNQDCPIEWFHYGCVGLTEAP-----KGKWYCPQCT 53 (70)
T ss_dssp CCCST-TSCCCC------SSEECCSCTTCSCCCEEHHHHTCSSCC-----SSCCCCHHHH
T ss_pred CeEEE-cCCCCC------CCEeEeCCCCCCccCCcccccccCcCC-----CCCEECCCCC
Confidence 35774 876532 2899999974 89999999986543 3789999874
No 105
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=96.48 E-value=0.00046 Score=65.29 Aligned_cols=48 Identities=29% Similarity=0.679 Sum_probs=34.8
Q ss_pred cCcccccCCCCc----ceEEcCCCCCcccccccCCCCcC------CC-CCCccccCCcc
Q 010445 91 ICEICRRTGDPN----KFMFCRRCDAAYHCYCQHPPHKN------VS-SGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~----~lL~Cd~C~~~YH~~CL~P~l~~------ip-~~~W~Cp~C~~ 138 (510)
+|.+|+++-+++ .|+.|+.|..|||..|++..... .| ...|+||.|..
T Consensus 4 ~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~ 62 (183)
T 3lqh_A 4 FCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTE 62 (183)
T ss_dssp BCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCC
T ss_pred cCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCC
Confidence 466777665443 49999999999999999854311 12 13799999975
No 106
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=96.21 E-value=0.00083 Score=56.05 Aligned_cols=47 Identities=17% Similarity=0.479 Sum_probs=35.5
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCC------------CcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPP------------HKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~------------l~~ip~~~W~Cp~C~~ 138 (510)
+|.+|..-.. +.++.|..|++.||..||.+. +...+...|.|+.|..
T Consensus 17 ~C~VC~~~t~-~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 17 MCDVCEVWTA-ESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp CCTTTCCCCS-SCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred ccCccccccc-cceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 7777875442 378999999999999999852 1223567899999964
No 107
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=96.06 E-value=0.002 Score=69.65 Aligned_cols=41 Identities=29% Similarity=0.769 Sum_probs=32.8
Q ss_pred CCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCC
Q 010445 185 SESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 230 (510)
Q Consensus 185 ~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~ 230 (510)
+.+..||+||.|..|||..|++++.+... ....|+||.|+.
T Consensus 53 n~~~~mI~CD~C~~WfH~~CVgi~~~~a~-----~~~~y~Cp~C~~ 93 (528)
T 3pur_A 53 KNDFQWIGCDSCQTWYHFLCSGLEQFEYY-----LYEKFFCPKCVP 93 (528)
T ss_dssp TSTTSEEECTTTCCEEEGGGTTCCGGGTT-----TEEECCCTTTHH
T ss_pred CcCCCEEECCCCCcCCCCcCCCCChhHhc-----CCCeEECcCCcC
Confidence 34668999999999999999998765432 124799999985
No 108
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=95.40 E-value=0.0033 Score=67.58 Aligned_cols=52 Identities=23% Similarity=0.561 Sum_probs=37.1
Q ss_pred ccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 32 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 32 ~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
.....| +|+...+ ..+.||.|+.|...||..|++........ ...|.|+.|.
T Consensus 35 ~~~~yC-~C~~~~d----~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~--~~~~~C~~C~ 86 (488)
T 3kv5_D 35 PPPVYC-VCRQPYD----VNRFMIECDICKDWFHGSCVGVEEHHAVD--IDLYHCPNCA 86 (488)
T ss_dssp CCCEET-TTTEECC----TTSCEEEBTTTCCEEEHHHHTCCGGGGGG--EEEBCCHHHH
T ss_pred CCCeEE-eCCCcCC----CCCCeEEccCCCCceeeeecCcCcccccC--CCEEECCCCc
Confidence 344567 8887542 13489999999999999999997654221 1579888774
No 109
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=94.93 E-value=0.0021 Score=68.48 Aligned_cols=45 Identities=22% Similarity=0.510 Sum_probs=34.9
Q ss_pred ccccCCC-CcceEEcCCCCCcccccccCCCCcCCC-CCCccccCCcc
Q 010445 94 ICRRTGD-PNKFMFCRRCDAAYHCYCQHPPHKNVS-SGPYLCPKHTK 138 (510)
Q Consensus 94 vC~~~gd-~~~lL~Cd~C~~~YH~~CL~P~l~~ip-~~~W~Cp~C~~ 138 (510)
+|+++.+ ...|+.|+.|..|||..|++....... ...|+|+.|..
T Consensus 9 iC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~ 55 (447)
T 3kv4_A 9 LCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEV 55 (447)
T ss_dssp TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHH
T ss_pred eCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCcc
Confidence 7887654 458999999999999999995433322 36799999975
No 110
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=94.61 E-value=0.015 Score=62.88 Aligned_cols=38 Identities=26% Similarity=0.536 Sum_probs=30.0
Q ss_pred CCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 51 ARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 51 ~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
...||.|+.|...||..|++........ ...|.||.|.
T Consensus 55 ~~~mI~CD~C~~WfH~~CVgi~~~~a~~--~~~y~Cp~C~ 92 (528)
T 3pur_A 55 DFQWIGCDSCQTWYHFLCSGLEQFEYYL--YEKFFCPKCV 92 (528)
T ss_dssp TTSEEECTTTCCEEEGGGTTCCGGGTTT--EEECCCTTTH
T ss_pred CCCEEECCCCCcCCCCcCCCCChhHhcC--CCeEECcCCc
Confidence 3479999999999999999997653221 2689999984
No 111
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=93.27 E-value=0.0032 Score=54.17 Aligned_cols=93 Identities=27% Similarity=0.672 Sum_probs=58.3
Q ss_pred ccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC------------------cCccc
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR------------------ICEIC 95 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~------------------~C~vC 95 (510)
+..|.+|...-... -.....+.-..||..||..|+..+... .-.||.|+ .|.+|
T Consensus 7 ~~~C~IC~~~~~~~-~~~~~~~~~~~CgH~fc~~Ci~~~~~~-------~~~CP~Cr~~~~~~~l~~l~i~~~~~~C~iC 78 (133)
T 4ap4_A 7 TVSCPICMDGYSEI-VQNGRLIVSTECGHVFCSQCLRDSLKN-------ANTCPTCRKKINHKRYHPIYIGSGTVSCPIC 78 (133)
T ss_dssp SCBCTTTCCBHHHH-HHTTCCEEEETTCCEEEHHHHHHHHTT-------CSBCTTTCCBCTTTCEEECBCSSSSCBCTTT
T ss_pred CCCCcccChhhhCc-cccccCeEecCCCChhhHHHHHHHHHh-------CCCCCCCCCcCccccccccccCCCCCCCCCC
Confidence 46899998753110 001234455689999999999877542 23788886 57777
Q ss_pred ccCCCC----cceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 96 RRTGDP----NKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 96 ~~~gd~----~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
...-.. ........|+..||..|+..-+.. ...||.|..
T Consensus 79 ~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~ 121 (133)
T 4ap4_A 79 MDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRK 121 (133)
T ss_dssp CCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHH----CSBCTTTCC
T ss_pred CCccccccccCcceEeCCCCChhhHHHHHHHHHc----CCCCCCCCC
Confidence 643211 123456678889999998754332 236777764
No 112
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=92.72 E-value=0.07 Score=50.21 Aligned_cols=29 Identities=7% Similarity=-0.047 Sum_probs=23.4
Q ss_pred ccccCCCCc-ceEEcCCCCCcccccccCCC
Q 010445 94 ICRRTGDPN-KFMFCRRCDAAYHCYCQHPP 122 (510)
Q Consensus 94 vC~~~gd~~-~lL~Cd~C~~~YH~~CL~P~ 122 (510)
.|+.+++.+ .||+|.+|.+|||..|+...
T Consensus 9 YCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~ 38 (177)
T 3rsn_A 9 DEENGRQLGEVELQCGICTKWFTADTFGID 38 (177)
T ss_dssp --CTTCCTTSCEEECTTTCCEEEGGGGTCC
T ss_pred EcCCCCCCCceeEeeccccceecHHHhccc
Confidence 688877765 79999999999999999843
No 113
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=91.66 E-value=0.04 Score=47.50 Aligned_cols=36 Identities=31% Similarity=0.640 Sum_probs=27.8
Q ss_pred ceEEcCCCCCcccccccCCCC------cCCC-CCCccccCCcc
Q 010445 103 KFMFCRRCDAAYHCYCQHPPH------KNVS-SGPYLCPKHTK 138 (510)
Q Consensus 103 ~lL~Cd~C~~~YH~~CL~P~l------~~ip-~~~W~Cp~C~~ 138 (510)
.|+.|+.|..|||..|+...- ..+| ...|.||.|..
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~ 43 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTE 43 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTT
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccc
Confidence 389999999999999998532 2334 44799999974
No 114
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=90.81 E-value=0.01 Score=50.85 Aligned_cols=96 Identities=21% Similarity=0.488 Sum_probs=54.7
Q ss_pred eEEcCCCCCcccccccCCCCcCCCCCCccccCCcccccCCCCCCCCCCccccccCccccccccccccccccccccccccC
Q 010445 104 FMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYR 183 (510)
Q Consensus 104 lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~C~~Cg~~~pgk~~s~rW~~~~~lC~~C~~~~~kg~~CpVC~r~Y~ 183 (510)
.+.-..|+..||..|+..-+.. .-.||.|.. .........-+ +......|++|...|.
T Consensus 26 ~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~------~~~~~~l~~l~------------i~~~~~~C~iC~~~~~ 83 (133)
T 4ap4_A 26 LIVSTECGHVFCSQCLRDSLKN----ANTCPTCRK------KINHKRYHPIY------------IGSGTVSCPICMDGYS 83 (133)
T ss_dssp CEEEETTCCEEEHHHHHHHHTT----CSBCTTTCC------BCTTTCEEECB------------CSSSSCBCTTTCCBHH
T ss_pred CeEecCCCChhhHHHHHHHHHh----CCCCCCCCC------cCccccccccc------------cCCCCCCCCCCCCccc
Confidence 3355589999999999753322 236777764 11111100000 1122345899988775
Q ss_pred CC-CCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 184 DS-ESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 184 d~-e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
+. +....+..-.|.+.||..|... +.. . ...||.|+..
T Consensus 84 ~~~~~~~~~~~~~CgH~fc~~Ci~~----~~~--~----~~~CP~Cr~~ 122 (133)
T 4ap4_A 84 EIVQNGRLIVSTECGHVFCSQCLRD----SLK--N----ANTCPTCRKK 122 (133)
T ss_dssp HHHHTTCCEEEETTSBEEEHHHHHH----HHH--H----CSBCTTTCCB
T ss_pred cccccCcceEeCCCCChhhHHHHHH----HHH--c----CCCCCCCCCc
Confidence 42 1223334557999999999762 111 1 3599999975
No 115
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.62 E-value=0.14 Score=41.17 Aligned_cols=68 Identities=19% Similarity=0.506 Sum_probs=46.2
Q ss_pred CCccccccCccccccccccccccccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCC
Q 010445 150 GLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCR 229 (510)
Q Consensus 150 ~~s~rW~~~~~lC~~C~~~~~kg~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr 229 (510)
...|+|......|..|...+ ...|++|...|...+. .+.-..|.+.||.+|+.. +.. ..-.||.||
T Consensus 6 ~~~w~~~~~~~~C~IC~~~~--~~~C~iC~~~~~~~~~--~~~~~~C~H~FH~~Ci~~----Wl~------~~~~CP~CR 71 (81)
T 2ecl_A 6 SGMWSWDVECDTCAICRVQV--MDACLRCQAENKQEDC--VVVWGECNHSFHNCCMSL----WVK------QNNRCPLCQ 71 (81)
T ss_dssp CCCCCCSCCCSCBTTTTBCT--TSCCTTHHHHTCTTTC--CEEEETTSCEEEHHHHHH----HTT------TCCBCTTTC
T ss_pred eEEeeecCCCCCCcccChhh--hccCcccccccCCCce--EEEeCCCCCccChHHHHH----HHH------hCCCCCCcC
Confidence 34678877777888887655 3459999888765432 233336999999999762 211 124899999
Q ss_pred CC
Q 010445 230 GE 231 (510)
Q Consensus 230 ~~ 231 (510)
..
T Consensus 72 ~~ 73 (81)
T 2ecl_A 72 QD 73 (81)
T ss_dssp CB
T ss_pred CC
Confidence 75
No 116
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=90.53 E-value=0.039 Score=51.10 Aligned_cols=91 Identities=13% Similarity=0.263 Sum_probs=58.9
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCCcCcccccCCCCcceEEcC--CC
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCRICEICRRTGDPNKFMFCR--RC 110 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~~C~vC~~~gd~~~lL~Cd--~C 110 (510)
-+..|..|+.......-..=..+.|..|-..|+..-...... +. ..+|.+|..++ .++.|+ .|
T Consensus 35 ~e~~Ct~CG~~~~~~~HPlf~v~lC~~Ck~~y~e~~f~~DeD--------G~----~~yC~wC~~Gg---~l~~Cdn~~C 99 (159)
T 3a1b_A 35 IEDICISCGSLNVTLEHPLFVGGMCQNCKNCFLECAYQYDDD--------GY----QSYCTICCGGR---EVLMCGNNNC 99 (159)
T ss_dssp GGGSBTTTCCSCCCEECSSBSSEECHHHHHHHHHHTTCBCTT--------SS----BSSCTTTSCCS---EEEECSSTTT
T ss_pred ccCcccCCCCcCccccCCCccchhhHHHHHHHhhcccccCCC--------CC----cceeeEecCCC---eEEeeCCCCC
Confidence 357888887642110111113457777777776654443321 11 13888898877 899999 89
Q ss_pred CCcccccccCCCCc------CCCCCCccccCCcc
Q 010445 111 DAAYHCYCQHPPHK------NVSSGPYLCPKHTK 138 (510)
Q Consensus 111 ~~~YH~~CL~P~l~------~ip~~~W~Cp~C~~ 138 (510)
.+.|=..|+...+. .....+|.|..|..
T Consensus 100 ~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P 133 (159)
T 3a1b_A 100 CRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGH 133 (159)
T ss_dssp CCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCS
T ss_pred CCchhHHHHHHhcCHhHHHHHhccCCCEEEecCC
Confidence 99999999874332 14578999988875
No 117
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=89.49 E-value=0.035 Score=57.96 Aligned_cols=91 Identities=14% Similarity=0.295 Sum_probs=56.1
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCCcCcccccCCCCcceEEcC--CC
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCRICEICRRTGDPNKFMFCR--RC 110 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~~C~vC~~~gd~~~lL~Cd--~C 110 (510)
-+.+|..|+....-..--.=+.+.|..|-..|+..-..... ..+. .+|.+|..++ .++.|+ .|
T Consensus 49 ~e~~C~~CG~~~~~~~HPl~~v~lC~~Ck~~y~~~~f~~D~--------DG~~----~yCr~C~~Gg---~l~~Cdn~~C 113 (386)
T 2pv0_B 49 IEDICICCGSLQVHTQHPLFEGGICAPCKDKFLDALFLYDD--------DGYQ----SYCSICCSGE---TLLICGNPDC 113 (386)
T ss_dssp GGGSBTTTCCSCCCSBCSSBSSBCCHHHHHHHHTTTTCBCS--------SSSB----CSCTTTCCCS---SCEECCSTTC
T ss_pred ccceeCCCCCcCccccCCCcCcchhhHHHHHHhccCcccCC--------CCCc----ccceEcCCCC---eEEEeCCCCC
Confidence 34578888764321111111234666666666553332211 2221 3888999887 799999 99
Q ss_pred CCcccccccCCCCcC------CCCCCccccCCcc
Q 010445 111 DAAYHCYCQHPPHKN------VSSGPYLCPKHTK 138 (510)
Q Consensus 111 ~~~YH~~CL~P~l~~------ip~~~W~Cp~C~~ 138 (510)
.+.|=..|+...+.. .....|.|-.|..
T Consensus 114 ~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p 147 (386)
T 2pv0_B 114 TRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLP 147 (386)
T ss_dssp CCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSS
T ss_pred CcchHHHHHHHhcChhHHHHhhccCCceEEEcCC
Confidence 999999998743321 2357999988875
No 118
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=88.38 E-value=0.16 Score=39.04 Aligned_cols=37 Identities=22% Similarity=0.546 Sum_probs=26.0
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
....|.+|...-.. ...+....|+..||..|+..+..
T Consensus 13 ~~~~C~IC~~~~~~-----~~~~~~~~C~H~fc~~Ci~~~~~ 49 (69)
T 2kiz_A 13 TEEKCTICLSILEE-----GEDVRRLPCMHLFHQVCVDQWLI 49 (69)
T ss_dssp CCCSBTTTTBCCCS-----SSCEEECTTSCEEEHHHHHHHHH
T ss_pred CCCCCeeCCccccC-----CCcEEEeCCCCHHHHHHHHHHHH
Confidence 34689999874321 13345557999999999987754
No 119
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=88.13 E-value=0.26 Score=35.92 Aligned_cols=37 Identities=22% Similarity=0.667 Sum_probs=25.9
Q ss_pred ccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
+..|.+|...-.. .+..+.-..|+..||..|+..+..
T Consensus 5 ~~~C~IC~~~~~~----~~~~~~~~~C~H~f~~~Ci~~w~~ 41 (55)
T 1iym_A 5 GVECAVCLAELED----GEEARFLPRCGHGFHAECVDMWLG 41 (55)
T ss_dssp SCCCTTTCCCCCT----TSCCEECSSSCCEECTTHHHHTTT
T ss_pred CCcCccCCccccC----CCceEECCCCCCcccHHHHHHHHH
Confidence 3589999875421 123444457999999999987754
No 120
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=87.99 E-value=0.088 Score=55.02 Aligned_cols=65 Identities=18% Similarity=0.492 Sum_probs=46.3
Q ss_pred ccccccccccccccc----------cccccccccCCCCCCCceecc--CcCCcccccCCCC--chHHHhhhccCCCCcee
Q 010445 159 YTCCDACGRLFVKGN----------YCPVCLKVYRDSESTPMVCCD--VCQRWVHCQCDGI--SDEKYLQFQVDGNLQYR 224 (510)
Q Consensus 159 ~~lC~~C~~~~~kg~----------~CpVC~r~Y~d~e~~~mLqCd--~C~~wfH~~Cd~l--~~e~y~~~~~~~~~~Y~ 224 (510)
..+|..|...|..+. ||.+|.. ++.++.|+ .|.+.|=..|+.. -...+..+. ....|.
T Consensus 70 v~lC~~Ck~~y~~~~f~~D~DG~~~yCr~C~~------Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~--~~d~W~ 141 (386)
T 2pv0_B 70 GGICAPCKDKFLDALFLYDDDGYQSYCSICCS------GETLLICGNPDCTRCYCFECVDSLVGPGTSGKVH--AMSNWV 141 (386)
T ss_dssp SBCCHHHHHHHHTTTTCBCSSSSBCSCTTTCC------CSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHH--HCSSCC
T ss_pred cchhhHHHHHHhccCcccCCCCCcccceEcCC------CCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhh--ccCCce
Confidence 466777776655543 6999984 78999999 9999999999873 222232221 235799
Q ss_pred CCCCCCC
Q 010445 225 CPTCRGE 231 (510)
Q Consensus 225 C~~Cr~~ 231 (510)
|-.|...
T Consensus 142 Cf~C~p~ 148 (386)
T 2pv0_B 142 CYLCLPS 148 (386)
T ss_dssp CTTTSSC
T ss_pred EEEcCCc
Confidence 9999865
No 121
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.82 E-value=0.14 Score=40.12 Aligned_cols=37 Identities=22% Similarity=0.813 Sum_probs=26.7
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
....|.+|...-.. .+.+....|+..||..|+..+..
T Consensus 22 ~~~~C~IC~~~~~~-----~~~~~~l~C~H~fh~~Ci~~w~~ 58 (75)
T 1x4j_A 22 EQTLCVVCMCDFES-----RQLLRVLPCNHEFHAKCVDKWLK 58 (75)
T ss_dssp SCCEETTTTEECCB-----TCEEEEETTTEEEETTHHHHHHH
T ss_pred CCCCCeECCcccCC-----CCeEEEECCCCHhHHHHHHHHHH
Confidence 44689999975421 14455556999999999998754
No 122
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.84 E-value=0.36 Score=39.04 Aligned_cols=34 Identities=26% Similarity=0.678 Sum_probs=27.6
Q ss_pred cccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccc
Q 010445 35 VMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQN 75 (510)
Q Consensus 35 ~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~ 75 (510)
..|.+|...-. .-+.|..|+..||..|+..++..
T Consensus 16 ~~C~IC~~~i~-------~g~~C~~C~h~fH~~Ci~kWl~~ 49 (74)
T 2ct0_A 16 KICNICHSLLI-------QGQSCETCGIRMHLPCVAKYFQS 49 (74)
T ss_dssp CBCSSSCCBCS-------SSEECSSSCCEECHHHHHHHSTT
T ss_pred CcCcchhhHcc-------cCCccCCCCchhhHHHHHHHHHh
Confidence 58999998542 34689999999999999987653
No 123
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.16 E-value=0.2 Score=40.87 Aligned_cols=38 Identities=21% Similarity=0.732 Sum_probs=25.1
Q ss_pred ccccccccccccCCccCCCCcE-Ee--CCCCCcchhhhcCCCccc
Q 010445 34 NVMCRLCFVGENEGCERARRML-SC--KSCGKKYHRNCLKNWAQN 75 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL-~C--~~C~~~yH~~CL~~~~~~ 75 (510)
...|.+|...... .+.|+ -| .+....||..||..|+..
T Consensus 15 ~~~C~IC~~~~~~----~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~ 55 (80)
T 2d8s_A 15 QDICRICHCEGDD----ESPLITPCHCTGSLHFVHQACLQQWIKS 55 (80)
T ss_dssp SCCCSSSCCCCCS----SSCEECSSSCCSSSCCEETTHHHHHHHH
T ss_pred CCCCeEcCccccC----CCeeEeccccCCcCCeeCHHHHHHHHhh
Confidence 4689999975532 12343 12 233599999999988754
No 124
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=84.98 E-value=0.49 Score=37.07 Aligned_cols=37 Identities=16% Similarity=0.530 Sum_probs=25.0
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
....|.+|...-.. ...+.-..|+..||..|+..+..
T Consensus 14 ~~~~C~IC~~~~~~-----~~~~~~~~C~H~fc~~Ci~~~~~ 50 (78)
T 2ect_A 14 SGLECPVCKEDYAL-----GESVRQLPCNHLFHDSCIVPWLE 50 (78)
T ss_dssp SSCCCTTTTSCCCT-----TSCEEECTTSCEEETTTTHHHHT
T ss_pred CCCCCeeCCccccC-----CCCEEEeCCCCeecHHHHHHHHH
Confidence 34689999875421 12333346999999999987653
No 125
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=82.53 E-value=0.35 Score=35.22 Aligned_cols=48 Identities=31% Similarity=0.648 Sum_probs=31.8
Q ss_pred cccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 172 GNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 172 g~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
...|+||...|.+.+. .+.-..|.+.||..|+.. +. .....||.||..
T Consensus 5 ~~~C~IC~~~~~~~~~--~~~~~~C~H~f~~~Ci~~----w~------~~~~~CP~Cr~~ 52 (55)
T 1iym_A 5 GVECAVCLAELEDGEE--ARFLPRCGHGFHAECVDM----WL------GSHSTCPLCRLT 52 (55)
T ss_dssp SCCCTTTCCCCCTTSC--CEECSSSCCEECTTHHHH----TT------TTCCSCSSSCCC
T ss_pred CCcCccCCccccCCCc--eEECCCCCCcccHHHHHH----HH------HcCCcCcCCCCE
Confidence 3469999887765433 233346899999999752 11 114579999864
No 126
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=81.68 E-value=0.27 Score=37.92 Aligned_cols=47 Identities=23% Similarity=0.569 Sum_probs=29.4
Q ss_pred ccccccccccccCCccCCCCcEEe--CCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 34 NVMCRLCFVGENEGCERARRMLSC--KSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C--~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
...|.+|...+.+ +-++-| .+.-+.||..||..|.... +.+.|+-|+
T Consensus 6 ~~~CrIC~~~~~~-----~l~~PC~C~gs~~~~H~~Cl~~W~~~~-----~~~~C~~C~ 54 (60)
T 1vyx_A 6 VPVCWICNEELGN-----ERFRACGCTGELENVHRSCLSTWLTIS-----RNTACQICG 54 (60)
T ss_dssp CCEETTTTEECSC-----CCCCSCCCSSGGGSCCHHHHHHHHHHH-----TCSBCTTTC
T ss_pred CCEeEEeecCCCC-----ceecCcCCCCchhhhHHHHHHHHHHhC-----CCCccCCCC
Confidence 3589999875421 123444 3444699999999987532 345555553
No 127
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=80.30 E-value=0.46 Score=34.50 Aligned_cols=37 Identities=22% Similarity=0.566 Sum_probs=26.8
Q ss_pred ccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
+..|.+|...-. ..+..+.-..|+..||..|+..+..
T Consensus 5 ~~~C~IC~~~~~----~~~~~~~~~~CgH~fc~~Ci~~~~~ 41 (55)
T 2ecm_A 5 SSGCPICLEDIH----TSRVVAHVLPCGHLLHRTCYEEMLK 41 (55)
T ss_dssp CCSCTTTCCCCC----TTTSCEEECTTSCEEETTHHHHHHH
T ss_pred CCcCcccChhhc----CCCcCeEecCCCCcccHHHHHHHHH
Confidence 468999987531 1124566678999999999987654
No 128
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=80.09 E-value=0.76 Score=38.64 Aligned_cols=55 Identities=22% Similarity=0.407 Sum_probs=32.1
Q ss_pred ccccccccccccCCc----------cCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 34 NVMCRLCFVGENEGC----------ERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs----------~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
+..|.+|...-.... ..+...+.-..|+..||..||..+..... ......||.|+
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~--~~~~~~CP~CR 89 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGN--KDGSLQCPSCK 89 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTC--CSSCCBCTTTC
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHccc--CCCCCcCCCCC
Confidence 468999987532110 11112344567999999999998763211 01344566654
No 129
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=79.88 E-value=0.43 Score=44.14 Aligned_cols=49 Identities=20% Similarity=0.624 Sum_probs=36.6
Q ss_pred cccccccccccccCCccCCCCcEEeC--CCCCcchhhhcCCCcccc---ccCCCCCcCCCCC
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCK--SCGKKYHRNCLKNWAQNR---DLFHWSSWKCPSC 89 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~--~C~~~yH~~CL~~~~~~~---~~~~~~~W~C~~C 89 (510)
.+..|.+|..+| +|+.|+ .|.+.|-..||.....+. .......|.|--|
T Consensus 78 ~~~yC~wC~~Gg--------~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C 131 (159)
T 3a1b_A 78 YQSYCTICCGGR--------EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMC 131 (159)
T ss_dssp SBSSCTTTSCCS--------EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTT
T ss_pred CcceeeEecCCC--------eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEec
Confidence 356999999877 999999 899999999997654321 1123478977655
No 130
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=79.69 E-value=0.51 Score=38.60 Aligned_cols=37 Identities=19% Similarity=0.576 Sum_probs=25.5
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
.+..|.+|...-.. .+.+.-..|+..||..|+..+..
T Consensus 39 ~~~~C~IC~~~~~~-----~~~~~~l~C~H~Fh~~Ci~~wl~ 75 (91)
T 2l0b_A 39 QEMCCPICCSEYVK-----GDVATELPCHHYFHKPCVSIWLQ 75 (91)
T ss_dssp SCSEETTTTEECCT-----TCEEEEETTTEEEEHHHHHHHHT
T ss_pred CCCCCcccChhhcC-----CCcEEecCCCChHHHHHHHHHHH
Confidence 45689999875421 13333345999999999988754
No 131
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=78.79 E-value=0.81 Score=35.77 Aligned_cols=37 Identities=16% Similarity=0.448 Sum_probs=26.0
Q ss_pred CccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 31 SNTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 31 ~~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
...+..|.+|...-. +-+.-..|+..||..|+..+..
T Consensus 12 ~~~~~~C~IC~~~~~-------~p~~~~~CgH~fC~~Ci~~~~~ 48 (74)
T 2yur_A 12 IPDELLCLICKDIMT-------DAVVIPCCGNSYCDECIRTALL 48 (74)
T ss_dssp SCGGGSCSSSCCCCT-------TCEECSSSCCEECTTHHHHHHH
T ss_pred CCCCCCCcCCChHHh-------CCeEcCCCCCHHHHHHHHHHHH
Confidence 345579999987542 3333334999999999987764
No 132
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.73 E-value=0.53 Score=36.48 Aligned_cols=37 Identities=22% Similarity=0.644 Sum_probs=25.1
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
.+..|.+|...-.. ...+.. ..|+..||..|+..+..
T Consensus 14 ~~~~C~IC~~~~~~----~~~~~~-~~C~H~f~~~Ci~~~~~ 50 (74)
T 2ep4_A 14 LHELCAVCLEDFKP----RDELGI-CPCKHAFHRKCLIKWLE 50 (74)
T ss_dssp CSCBCSSSCCBCCS----SSCEEE-ETTTEEEEHHHHHHHHH
T ss_pred CCCCCcCCCcccCC----CCcEEE-cCCCCEecHHHHHHHHH
Confidence 34689999986421 112322 25999999999987654
No 133
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.87 E-value=0.6 Score=37.11 Aligned_cols=50 Identities=24% Similarity=0.533 Sum_probs=33.3
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
..|+||...|.+.+..+.+. .|.+.||..|+.. +... ......||.|+..
T Consensus 16 ~~C~IC~~~~~~~~~~~~~~--~CgH~fC~~Ci~~----~~~~---~~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 16 LECPICMESFTEEQLRPKLL--HCGHTICRQCLEK----LLAS---SINGVRCPFCSKI 65 (88)
T ss_dssp CBCTTTCCBCCTTSSCEEEC--SSSCEEEHHHHHH----HHHH---CSSCBCCTTTCCC
T ss_pred CCCccCCccccccCCCeEEC--CCCChhhHHHHHH----HHHc---CCCCcCCCCCCCc
Confidence 46999998887654323332 6899999999762 1111 1235899999975
No 134
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=77.20 E-value=0.81 Score=38.44 Aligned_cols=55 Identities=15% Similarity=0.288 Sum_probs=33.6
Q ss_pred ccccccccccCCCC-----------CC-CceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCCC
Q 010445 173 NYCPVCLKVYRDSE-----------ST-PMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 232 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e-----------~~-~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~~ 232 (510)
..|+||...|.+.. .. ..+.--.|.+.||..|+.. +..... ......||.||...
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~----wl~~~~-~~~~~~CP~CR~~~ 92 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLA----MYCNGN-KDGSLQCPSCKTIY 92 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHH----HHHHTC-CSSCCBCTTTCCBS
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHH----HHHccc-CCCCCcCCCCCCcc
Confidence 46999988875432 11 1222446899999999762 221111 13467999999753
No 135
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=76.98 E-value=0.72 Score=39.45 Aligned_cols=42 Identities=14% Similarity=0.418 Sum_probs=26.3
Q ss_pred cccccccccccccCC----------ccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEG----------CERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~g----------s~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
.++.|.+|...-... ....+..+.-..|+..||..|+..++.
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~ 87 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK 87 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHT
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHH
Confidence 346899998753211 011122344457999999999998764
No 136
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=76.45 E-value=0.93 Score=32.82 Aligned_cols=47 Identities=32% Similarity=0.692 Sum_probs=31.1
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
..|+||...|.+.. ..+.--.|.+.||..|+.. +.+. ...||.|+..
T Consensus 6 ~~C~IC~~~~~~~~--~~~~~~~CgH~fc~~Ci~~----~~~~------~~~CP~Cr~~ 52 (55)
T 2ecm_A 6 SGCPICLEDIHTSR--VVAHVLPCGHLLHRTCYEE----MLKE------GYRCPLCSGP 52 (55)
T ss_dssp CSCTTTCCCCCTTT--SCEEECTTSCEEETTHHHH----HHHH------TCCCTTSCCS
T ss_pred CcCcccChhhcCCC--cCeEecCCCCcccHHHHHH----HHHc------CCcCCCCCCc
Confidence 35899988775432 2334456899999999762 2111 2689999864
No 137
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=75.48 E-value=0.74 Score=42.60 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=17.0
Q ss_pred cCccccccccc-cccccccccccccccCC
Q 010445 157 LGYTCCDACGR-LFVKGNYCPVCLKVYRD 184 (510)
Q Consensus 157 ~~~~lC~~C~~-~~~kg~~CpVC~r~Y~d 184 (510)
.+..+|..|.. +|.....|..|.+....
T Consensus 53 ~g~~yC~~cy~~~~~~~~~C~~C~~~I~~ 81 (188)
T 1rut_X 53 SGMILCRNDYIRLFGNSGACSACGQSIPA 81 (188)
T ss_dssp TTEEECHHHHHHHHSCCEECTTTCCEECT
T ss_pred CCccccccccccccccCCccccCCCcccc
Confidence 35677887754 33322368888876643
No 138
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.25 E-value=1 Score=34.90 Aligned_cols=36 Identities=11% Similarity=0.337 Sum_probs=26.3
Q ss_pred ccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 32 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 32 ~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
.....|.+|...-. +-+.-..|+..||..|+..+..
T Consensus 13 ~~~~~C~IC~~~~~-------~p~~~~~CgH~fC~~Ci~~~~~ 48 (72)
T 2djb_A 13 TPYILCSICKGYLI-------DATTITECLHTFCKSCIVRHFY 48 (72)
T ss_dssp CGGGSCTTTSSCCS-------SCEECSSSCCEECHHHHHHHHH
T ss_pred CCCCCCCCCChHHH-------CcCEECCCCCHHHHHHHHHHHH
Confidence 34579999987532 3344468999999999987654
No 139
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=75.24 E-value=1.1 Score=37.06 Aligned_cols=28 Identities=21% Similarity=0.545 Sum_probs=23.0
Q ss_pred cccccCcccccccccccccccccccccc
Q 010445 153 VRWFLGYTCCDACGRLFVKGNYCPVCLK 180 (510)
Q Consensus 153 ~rW~~~~~lC~~C~~~~~kg~~CpVC~r 180 (510)
..|...+..|..|...|...-|||-|+.
T Consensus 12 l~~~~~~~~C~~C~~~~~~~afCPeCgq 39 (81)
T 2jrp_A 12 LERNGDTAHCETCAKDFSLQALCPDCRQ 39 (81)
T ss_dssp CEECSSEEECTTTCCEEEEEEECSSSCS
T ss_pred cccCCCceECccccccCCCcccCcchhh
Confidence 4566667779999998888889999975
No 140
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=75.09 E-value=3.3 Score=32.03 Aligned_cols=35 Identities=23% Similarity=0.540 Sum_probs=24.8
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQN 75 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~ 75 (510)
.+..|.+|...-.. .++ ..|+..||..|+..+...
T Consensus 11 ~~~~C~IC~~~~~~------p~~--l~CgH~fC~~Ci~~~~~~ 45 (79)
T 2egp_A 11 EEVTCPICLELLTE------PLS--LDCGHSLCRACITVSNKE 45 (79)
T ss_dssp CCCEETTTTEECSS------CCC--CSSSCCCCHHHHSCCCCC
T ss_pred cCCCCcCCCcccCC------eeE--CCCCCHHHHHHHHHHHHh
Confidence 34689999975421 222 279999999999987653
No 141
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.37 E-value=1.1 Score=35.92 Aligned_cols=41 Identities=17% Similarity=0.541 Sum_probs=25.2
Q ss_pred ccccccccccccCC-------ccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 34 NVMCRLCFVGENEG-------CERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 34 ~~~C~vC~~~G~~g-------s~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
++.|.+|...-... ....+.++.-..|+..||..|+..+..
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~ 62 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVK 62 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTT
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHH
Confidence 35788887754210 001122334447999999999998765
No 142
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.29 E-value=1.7 Score=33.40 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=23.7
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
....|.+|...-. +.+.- .|+..||..|+..+..
T Consensus 14 ~~~~C~IC~~~~~-------~~~~~-~CgH~fC~~Ci~~~~~ 47 (71)
T 2d8t_A 14 TVPECAICLQTCV-------HPVSL-PCKHVFCYLCVKGASW 47 (71)
T ss_dssp SCCBCSSSSSBCS-------SEEEE-TTTEEEEHHHHHHCTT
T ss_pred CCCCCccCCcccC-------CCEEc-cCCCHHHHHHHHHHHH
Confidence 3468999987541 22222 6999999999987653
No 143
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=72.73 E-value=3.6 Score=37.64 Aligned_cols=69 Identities=16% Similarity=0.228 Sum_probs=34.7
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcccccCCCCCCCCCCccccccCcccccccccccc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFV 170 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~C~~Cg~~~pgk~~s~rW~~~~~lC~~C~~~~~ 170 (510)
.|..|+++.....++. .-++.||..|.. |..|+....+.. . ...+..+|..|....
T Consensus 62 ~C~~C~~~I~~~~~~~--a~~~~wH~~CF~------------------C~~C~~~L~~~~--f-~~~g~~yC~~~y~~~- 117 (182)
T 2jtn_A 62 MCAGCDQHILDRFILK--ALDRHWHSKCLK------------------CSDCHVPLAERC--F-SRGESVYCKDDFFKR- 117 (182)
T ss_dssp BCBTSSSBCCCSEEEE--ETTEEECSSTTS------------------CTTTCCCCSSCC--E-EETTEEECHHHHHHT-
T ss_pred cCccCCCCccCceeEE--ecCCeEccccCc------------------cCCCCCccCCCc--e-eECCEeeecCccccc-
Confidence 4555665544322222 235667765544 666765543322 1 233556777775321
Q ss_pred ccccccccccccC
Q 010445 171 KGNYCPVCLKVYR 183 (510)
Q Consensus 171 kg~~CpVC~r~Y~ 183 (510)
-+..|..|.+...
T Consensus 118 f~~kC~~C~~~I~ 130 (182)
T 2jtn_A 118 FGTKCAACQLGIP 130 (182)
T ss_dssp TSCCCTTTCCCCC
T ss_pred cccccccCCCccC
Confidence 1345777776543
No 144
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.67 E-value=0.62 Score=36.07 Aligned_cols=49 Identities=24% Similarity=0.579 Sum_probs=31.3
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGECYQ 234 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~~~~ 234 (510)
..|+||...|.+... ++. -.|.+.||..|+.. +.+. ...||.||..-..
T Consensus 16 ~~C~IC~~~~~~~~~--~~~-~~C~H~f~~~Ci~~----~~~~------~~~CP~Cr~~~~~ 64 (74)
T 2ep4_A 16 ELCAVCLEDFKPRDE--LGI-CPCKHAFHRKCLIK----WLEV------RKVCPLCNMPVLQ 64 (74)
T ss_dssp CBCSSSCCBCCSSSC--EEE-ETTTEEEEHHHHHH----HHHH------CSBCTTTCCBCSS
T ss_pred CCCcCCCcccCCCCc--EEE-cCCCCEecHHHHHH----HHHc------CCcCCCcCccccc
Confidence 468999887755432 111 14899999999762 2111 2389999976443
No 145
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.49 E-value=0.46 Score=37.08 Aligned_cols=47 Identities=23% Similarity=0.656 Sum_probs=31.4
Q ss_pred cccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 172 GNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 172 g~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
...|+||...|.... .+..-.|.+.||..|+.. +... ...||.||..
T Consensus 23 ~~~C~IC~~~~~~~~---~~~~l~C~H~fh~~Ci~~----w~~~------~~~CP~Cr~~ 69 (75)
T 1x4j_A 23 QTLCVVCMCDFESRQ---LLRVLPCNHEFHAKCVDK----WLKA------NRTCPICRAD 69 (75)
T ss_dssp CCEETTTTEECCBTC---EEEEETTTEEEETTHHHH----HHHH------CSSCTTTCCC
T ss_pred CCCCeECCcccCCCC---eEEEECCCCHhHHHHHHH----HHHc------CCcCcCcCCc
Confidence 346999998775433 333345899999999762 2111 2489999975
No 146
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=72.39 E-value=3.6 Score=37.13 Aligned_cols=44 Identities=16% Similarity=0.135 Sum_probs=21.4
Q ss_pred CcccccCCCCCCCCCCccccccCccccccccccccccccccccccccC
Q 010445 136 HTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYR 183 (510)
Q Consensus 136 C~~C~~Cg~~~pgk~~s~rW~~~~~lC~~C~~~~~kg~~CpVC~r~Y~ 183 (510)
|..|..|+....+.. . ...+..+|..|.... -+..|..|.+...
T Consensus 33 CF~C~~C~~~L~~~~--f-~~~g~~yC~~~y~~~-f~~~C~~C~~~I~ 76 (169)
T 2rgt_A 33 CLKCSDCHVPLAERC--F-SRGESVYCKDDFFKR-FGTKCAACQLGIP 76 (169)
T ss_dssp TSBCTTTCCBCCSCC--E-ESSSCEECHHHHHHH-HSCBCTTTCCBCC
T ss_pred cCccCCCCCcCCCCC--c-ccCCeeeeccccccc-ccccccccccccC
Confidence 333666665443321 1 223556676664321 1345777766543
No 147
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=72.33 E-value=2.6 Score=35.12 Aligned_cols=36 Identities=31% Similarity=0.816 Sum_probs=28.2
Q ss_pred cCCCCcEEeCCCC-CcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 49 ERARRMLSCKSCG-KKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 49 ~~~eeLL~C~~C~-~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
...-+||.|..|+ .+-|..|...... ...|.|..|.
T Consensus 41 ~~~W~L~lC~~Cgs~gtH~~Cs~l~~~------~~~weC~~C~ 77 (85)
T 1weq_A 41 EGRWRLILCATCGSHGTHRDCSSLRPN------SKKWECNECL 77 (85)
T ss_dssp SSTTBCEECSSSCCCEECSGGGTCCTT------CSCCCCTTTS
T ss_pred CCCEEEEeCcccCCchhHHHHhCCcCC------CCCEECCcCc
Confidence 3456899999999 7899999997432 2689988874
No 148
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.29 E-value=1.3 Score=36.01 Aligned_cols=50 Identities=22% Similarity=0.521 Sum_probs=31.7
Q ss_pred ccccccccccCCCCCCCcee---ccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVC---CDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 232 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLq---Cd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~~ 232 (510)
..|.||...|.+. .+|+. |....++||..|+.. +.... ....||.|+...
T Consensus 16 ~~C~IC~~~~~~~--~~l~~pC~C~Gs~h~fH~~Cl~~----Wl~~~----~~~~CplCr~~~ 68 (80)
T 2d8s_A 16 DICRICHCEGDDE--SPLITPCHCTGSLHFVHQACLQQ----WIKSS----DTRCCELCKYEF 68 (80)
T ss_dssp CCCSSSCCCCCSS--SCEECSSSCCSSSCCEETTHHHH----HHHHH----CCSBCSSSCCBC
T ss_pred CCCeEcCccccCC--CeeEeccccCCcCCeeCHHHHHH----HHhhC----CCCCCCCCCCee
Confidence 4688898777543 23442 334459999999762 22211 246899999764
No 149
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=71.34 E-value=1.5 Score=45.41 Aligned_cols=54 Identities=24% Similarity=0.584 Sum_probs=35.7
Q ss_pred cccccccccCCCCCCCceecc--CcCCcccccCCCCchHHHhh-hccC----CCCceeCCCCCCC
Q 010445 174 YCPVCLKVYRDSESTPMVCCD--VCQRWVHCQCDGISDEKYLQ-FQVD----GNLQYRCPTCRGE 231 (510)
Q Consensus 174 ~CpVC~r~Y~d~e~~~mLqCd--~C~~wfH~~Cd~l~~e~y~~-~~~~----~~~~Y~C~~Cr~~ 231 (510)
-|+||+-.+.+....+-..|. .|.+-||..|+.. +.+ .... .-..-.||.|+..
T Consensus 310 ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~k----WLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 310 RCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEE----WFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp SCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHH----HHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred cCcccceeecCCCCCccccccCCccCCccchHHHHH----HHHhCCCccccccccCCCCCCCCCc
Confidence 599999887664555666788 8999999999752 111 1100 0123579999963
No 150
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=70.84 E-value=2.1 Score=36.75 Aligned_cols=49 Identities=27% Similarity=0.474 Sum_probs=26.2
Q ss_pred CcccccCCCCCCCCCCccccccCccccccccc-cccccccccccccccCC
Q 010445 136 HTKCHSCGSNVPGNGLSVRWFLGYTCCDACGR-LFVKGNYCPVCLKVYRD 184 (510)
Q Consensus 136 C~~C~~Cg~~~pgk~~s~rW~~~~~lC~~C~~-~~~kg~~CpVC~r~Y~d 184 (510)
|..|..|+......+...-+..+..+|..|.. ++.....|..|.+....
T Consensus 29 CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~~~~~~~~C~~C~~~I~~ 78 (131)
T 2xjy_A 29 CLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLCASCDKRIRA 78 (131)
T ss_dssp TCBCTTTCCBCSSTTCCEEEETTEEECHHHHHHHHCCCEECTTTCCEECT
T ss_pred HcccCcCCCccccCCCeEEEECCEEeecCchhhhCCCccChhhcCCccCc
Confidence 34466777554221222223446677877754 33333378888876643
No 151
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.67 E-value=2.9 Score=31.94 Aligned_cols=34 Identities=18% Similarity=0.611 Sum_probs=24.4
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
....|.+|...-. +..+. .|+..||..|+..+..
T Consensus 19 ~~~~C~IC~~~~~------~~~~~--~CgH~fC~~Ci~~~~~ 52 (73)
T 2ysl_A 19 EEVICPICLDILQ------KPVTI--DCGHNFCLKCITQIGE 52 (73)
T ss_dssp CCCBCTTTCSBCS------SEEEC--TTCCEEEHHHHHHHCS
T ss_pred cCCEeccCCcccC------CeEEc--CCCChhhHHHHHHHHH
Confidence 4569999997542 12222 8999999999987654
No 152
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=69.42 E-value=1.1 Score=37.29 Aligned_cols=35 Identities=23% Similarity=0.608 Sum_probs=28.0
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
....|.+|...- .+-+.|..|+..||..|+..+..
T Consensus 21 ~~~~C~IC~~~~-------~~p~~~~~CgH~FC~~Ci~~~~~ 55 (100)
T 3lrq_A 21 EVFRCFICMEKL-------RDARLCPHCSKLCCFSCIRRWLT 55 (100)
T ss_dssp HHTBCTTTCSBC-------SSEEECTTTCCEEEHHHHHHHHH
T ss_pred CCCCCccCCccc-------cCccccCCCCChhhHHHHHHHHH
Confidence 346899999854 25677889999999999997654
No 153
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.64 E-value=1.6 Score=34.46 Aligned_cols=34 Identities=12% Similarity=0.321 Sum_probs=24.5
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
....|.+|...-. +-+. ..|+..||..|+..+..
T Consensus 14 ~~~~C~IC~~~~~-------~p~~-~~CgH~fC~~Ci~~~~~ 47 (81)
T 2csy_A 14 IPFRCFICRQAFQ-------NPVV-TKCRHYFCESCALEHFR 47 (81)
T ss_dssp CCSBCSSSCSBCC-------SEEE-CTTSCEEEHHHHHHHHH
T ss_pred CCCCCcCCCchhc-------CeeE-ccCCCHhHHHHHHHHHH
Confidence 3468999987542 2222 57999999999987654
No 154
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=68.40 E-value=1 Score=34.12 Aligned_cols=34 Identities=15% Similarity=0.527 Sum_probs=24.7
Q ss_pred ccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
...|.+|...-. +-..-..|+..||..|+..+..
T Consensus 5 ~~~C~IC~~~~~-------~~~~~~~C~H~fc~~Ci~~~~~ 38 (68)
T 1chc_A 5 AERCPICLEDPS-------NYSMALPCLHAFCYVCITRWIR 38 (68)
T ss_dssp CCCCSSCCSCCC-------SCEEETTTTEEESTTHHHHHHH
T ss_pred CCCCeeCCcccc-------CCcEecCCCCeeHHHHHHHHHh
Confidence 458999988542 2234567999999999987653
No 155
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.83 E-value=1.2 Score=33.59 Aligned_cols=41 Identities=24% Similarity=0.615 Sum_probs=27.7
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
....|.+|...-... .....++.-..|+..||..|+..+..
T Consensus 14 ~~~~C~IC~~~~~~~-~~~~~~~~~~~CgH~fc~~Ci~~~~~ 54 (69)
T 2ea6_A 14 GTVSCPICMDGYSEI-VQNGRLIVSTECGHVFCSQCLRDSLK 54 (69)
T ss_dssp CCCCCTTTCCCHHHH-TTTTCCEEECSSSCEEEHHHHHHHHH
T ss_pred CCCCCcccCcccccc-ccccCCeEeCCCCChhcHHHHHHHHH
Confidence 346899999853210 01124556678999999999987654
No 156
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.80 E-value=1.9 Score=32.58 Aligned_cols=35 Identities=14% Similarity=0.470 Sum_probs=24.9
Q ss_pred ccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 32 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 32 ~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
.....|.+|...-.. ..+ ..|+..||..|+..+..
T Consensus 13 ~~~~~C~IC~~~~~~------p~~--~~CgH~fC~~Ci~~~~~ 47 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCS------PKQ--TECGHRFCESCMAALLS 47 (66)
T ss_dssp CCCEECTTTCCEESS------CCC--CSSSCCCCHHHHHHHHT
T ss_pred CcCCCCCCCChHhcC------eeE--CCCCCHHHHHHHHHHHH
Confidence 345789999875421 222 48999999999987653
No 157
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.11 E-value=2.5 Score=31.56 Aligned_cols=45 Identities=22% Similarity=0.700 Sum_probs=30.1
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCC
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 89 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C 89 (510)
.+..|.+|...-. +..+. .|+..||..|+..+.... .....||.|
T Consensus 19 ~~~~C~IC~~~~~------~p~~~--~CgH~fC~~Ci~~~~~~~----~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQ------KPVTI--DCGHNFCLKCITQIGETS----CGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCS------SCEEC--TTSSEECHHHHHHHHHHC----SSCCCCSCC
T ss_pred cCCCCCcCCchhC------CeEEe--CCCCcchHHHHHHHHHcC----CCCCcCcCC
Confidence 4568999987542 12332 899999999998775421 134567765
No 158
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=65.19 E-value=1.8 Score=36.89 Aligned_cols=68 Identities=22% Similarity=0.426 Sum_probs=39.3
Q ss_pred ccccccCccccccccccccccccccccccccCCCCC-CCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCC
Q 010445 152 SVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSES-TPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRG 230 (510)
Q Consensus 152 s~rW~~~~~lC~~C~~~~~kg~~CpVC~r~Y~d~e~-~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~ 230 (510)
.|+|......|..|...+.. .|++|.-.+....+ ...+.--.|.+.||..|+.. +.. ....||.||.
T Consensus 30 ~w~~d~~~d~CaIC~~~~~~--~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~----Wl~------~~~~CP~Cr~ 97 (106)
T 3dpl_R 30 LWAWDIVVDNCAICRNHIMD--LCIECQANQASATSEECTVAWGVCNHAFHFHCISR----WLK------TRQVCPLDNR 97 (106)
T ss_dssp EEEESSCSCCCSSSCSCTTS--CCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHH----HHT------TCSBCSSSCS
T ss_pred EeecCCCCCCCccCChhHhC--cCchhhccccccCCccceEeecccCcEECHHHHHH----HHH------cCCcCcCCCC
Confidence 34565566677777655432 57777643321111 11233347999999999652 211 1468999997
Q ss_pred C
Q 010445 231 E 231 (510)
Q Consensus 231 ~ 231 (510)
.
T Consensus 98 ~ 98 (106)
T 3dpl_R 98 E 98 (106)
T ss_dssp B
T ss_pred c
Confidence 5
No 159
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.31 E-value=2.5 Score=32.89 Aligned_cols=49 Identities=20% Similarity=0.440 Sum_probs=31.1
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
..|+||...+.+. .++ .|.+.||..|+... ............||.|+..
T Consensus 20 ~~C~IC~~~~~~p---~~~---~CgH~fC~~Ci~~~----~~~~~~~~~~~~CP~Cr~~ 68 (85)
T 2ecv_A 20 VTCPICLELLTQP---LSL---DCGHSFCQACLTAN----HKKSMLDKGESSCPVCRIS 68 (85)
T ss_dssp CCCTTTCSCCSSC---BCC---SSSCCBCTTHHHHH----HHHHHHTTSCCCCTTTCCS
T ss_pred CCCCCCCcccCCc---eeC---CCCCHHHHHHHHHH----HHHhhcCCCCCcCCCCCCc
Confidence 4689998877542 122 68999999997631 1111112236899999975
No 160
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.72 E-value=3.4 Score=32.55 Aligned_cols=49 Identities=22% Similarity=0.539 Sum_probs=29.7
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCC
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 89 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C 89 (510)
....|.+|...-... .....-..|+..||..|+..+.... .....||.|
T Consensus 14 ~~~~C~IC~~~~~~~----~~~~~~~~CgH~fC~~Ci~~~~~~~----~~~~~CP~C 62 (88)
T 2ct2_A 14 EVLECPICMESFTEE----QLRPKLLHCGHTICRQCLEKLLASS----INGVRCPFC 62 (88)
T ss_dssp SCCBCTTTCCBCCTT----SSCEEECSSSCEEEHHHHHHHHHHC----SSCBCCTTT
T ss_pred CCCCCccCCcccccc----CCCeEECCCCChhhHHHHHHHHHcC----CCCcCCCCC
Confidence 346899999754211 1112223799999999998765432 123556654
No 161
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.84 E-value=1.5 Score=33.38 Aligned_cols=33 Identities=18% Similarity=0.721 Sum_probs=23.9
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
....|.+|...-. + .-..|+..||..|+..+..
T Consensus 14 ~~~~C~IC~~~~~-------~--~~~~CgH~fc~~Ci~~~~~ 46 (70)
T 2ecn_A 14 DEEECCICMDGRA-------D--LILPCAHSFCQKCIDKWSD 46 (70)
T ss_dssp CCCCCSSSCCSCC-------S--EEETTTEEECHHHHHHSSC
T ss_pred CCCCCeeCCcCcc-------C--cccCCCCcccHHHHHHHHH
Confidence 3568999988541 2 2246999999999987654
No 162
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=60.53 E-value=4 Score=33.75 Aligned_cols=34 Identities=29% Similarity=0.911 Sum_probs=25.2
Q ss_pred CCcCCCCCCcCcccccCCCCcceEEcCC--CCCcccccccC
Q 010445 82 SSWKCPSCRICEICRRTGDPNKFMFCRR--CDAAYHCYCQH 120 (510)
Q Consensus 82 ~~W~C~~C~~C~vC~~~gd~~~lL~Cd~--C~~~YH~~CL~ 120 (510)
..|. ..|.+|++.+ ....+.|.. |.++||..|..
T Consensus 14 ~R~~----l~C~iC~~~~-~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 14 ARWK----LTCYLCKQKG-VGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCCC----CCBTTTTBCC-SSCEEECSCTTTCCEEEHHHHH
T ss_pred HHhc----CCCcCCCCCC-CcEeEecCCCCCCCcCcHHHHH
Confidence 5674 5788887642 126899985 99999999965
No 163
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.28 E-value=4.7 Score=29.17 Aligned_cols=45 Identities=22% Similarity=0.776 Sum_probs=29.3
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCC
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 89 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C 89 (510)
....|.+|...-.. ..+ ..|+..||..|+..+.... .....||.|
T Consensus 14 ~~~~C~IC~~~~~~------p~~--~~CgH~fC~~Ci~~~~~~~----~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKE------PVI--IECGHNFCKACITRWWEDL----ERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSS------CCC--CSSCCCCCHHHHHHHTTSS----CCSCCCSCC
T ss_pred cCCCCccCCcccCc------cEe--CCCCCccCHHHHHHHHHhc----CCCCCCCCC
Confidence 34689999985421 222 3699999999998764321 134567765
No 164
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=59.55 E-value=2.2 Score=37.28 Aligned_cols=42 Identities=17% Similarity=0.509 Sum_probs=0.4
Q ss_pred ccccccccccccCCc----------cCCCCcEEeCCCCCcchhhhcCCCccc
Q 010445 34 NVMCRLCFVGENEGC----------ERARRMLSCKSCGKKYHRNCLKNWAQN 75 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs----------~~~eeLL~C~~C~~~yH~~CL~~~~~~ 75 (510)
++.|.+|...-.... ...+..+.-..|+..||..|+..++..
T Consensus 48 ~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~ 99 (117)
T 4a0k_B 48 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT 99 (117)
T ss_dssp C---------------------------------------------------
T ss_pred CCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc
Confidence 468999987532100 011112233479999999999998653
No 165
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=59.24 E-value=1.4 Score=33.44 Aligned_cols=41 Identities=24% Similarity=0.615 Sum_probs=27.7
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
.+..|.+|...-... ......+.-..|+..||..|+..+..
T Consensus 9 ~~~~C~IC~~~~~~~-~~~~~~~~~~~CgH~fc~~Ci~~~~~ 49 (71)
T 3ng2_A 9 GTVSCPICMDGYSEI-VQNGRLIVSTECGHVFCSQCLRDSLK 49 (71)
T ss_dssp TCCBCTTTCCBHHHH-HTTTCCEEECTTSCEEEHHHHHHHHH
T ss_pred CCCCCcccChhhhcc-ccccCCeEeCCCCChHhHHHHHHHHH
Confidence 346899999753110 01125556778999999999987654
No 166
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.21 E-value=2.3 Score=34.21 Aligned_cols=44 Identities=23% Similarity=0.428 Sum_probs=29.0
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
.|.+|.....+ -+.|..|+..||..|+..-+... ..=.||.|..
T Consensus 17 ~C~IC~~~i~~--g~~C~~C~h~fH~~Ci~kWl~~~--~~~~CP~Cr~ 60 (74)
T 2ct0_A 17 ICNICHSLLIQ--GQSCETCGIRMHLPCVAKYFQSN--AEPRCPHCND 60 (74)
T ss_dssp BCSSSCCBCSS--SEECSSSCCEECHHHHHHHSTTC--SSCCCTTTCS
T ss_pred cCcchhhHccc--CCccCCCCchhhHHHHHHHHHhc--CCCCCCCCcC
Confidence 56666655542 35788999999999998544322 1246777763
No 167
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=58.00 E-value=2.8 Score=37.66 Aligned_cols=35 Identities=17% Similarity=0.563 Sum_probs=26.8
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
....|.+|...-. +-+....|+..||..|+..+..
T Consensus 53 ~~~~C~IC~~~~~-------~p~~~~~CgH~fC~~Ci~~~~~ 87 (165)
T 2ckl_B 53 SELMCPICLDMLK-------NTMTTKECLHRFCADCIITALR 87 (165)
T ss_dssp HHHBCTTTSSBCS-------SEEEETTTCCEEEHHHHHHHHH
T ss_pred CCCCCcccChHhh-------CcCEeCCCCChhHHHHHHHHHH
Confidence 4468999987542 4556678999999999987654
No 168
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=57.00 E-value=6.8 Score=32.79 Aligned_cols=44 Identities=20% Similarity=0.568 Sum_probs=29.5
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
.+..|.+|...-. +..+. .|+..|+..|+..+... ....||.|+
T Consensus 14 ~~~~C~iC~~~~~------~p~~~--~CgH~fC~~Ci~~~~~~------~~~~CP~Cr 57 (115)
T 3l11_A 14 SECQCGICMEILV------EPVTL--PCNHTLCKPCFQSTVEK------ASLCCPFCR 57 (115)
T ss_dssp HHHBCTTTCSBCS------SCEEC--TTSCEECHHHHCCCCCT------TTSBCTTTC
T ss_pred CCCCCccCCcccC------ceeEc--CCCCHHhHHHHHHHHhH------CcCCCCCCC
Confidence 3568999997542 12222 79999999999987542 345666553
No 169
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=56.94 E-value=9.2 Score=34.85 Aligned_cols=16 Identities=13% Similarity=0.160 Sum_probs=9.0
Q ss_pred CccccCCcccccCCCC
Q 010445 130 PYLCPKHTKCHSCGSN 145 (510)
Q Consensus 130 ~W~Cp~C~~C~~Cg~~ 145 (510)
.++-+.|..|..|+..
T Consensus 141 ~~~H~~CF~C~~C~~~ 156 (182)
T 2jtn_A 141 FVYHLHCFACVVCKRQ 156 (182)
T ss_dssp EECCTTTCCCTTTCCC
T ss_pred CCEEeCCCcCCCCCCC
Confidence 3444566666666654
No 170
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=56.19 E-value=6.2 Score=30.57 Aligned_cols=49 Identities=22% Similarity=0.520 Sum_probs=29.7
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
....|.+|...-. +-+. ..|+..||..|+..+..... .......||.|+
T Consensus 18 ~~~~C~IC~~~~~-------~p~~-~~CgH~fC~~Ci~~~~~~~~-~~~~~~~CP~Cr 66 (85)
T 2ecw_A 18 EEVTCPICLELLK-------EPVS-ADCNHSFCRACITLNYESNR-NTDGKGNCPVCR 66 (85)
T ss_dssp TTTSCTTTCSCCS-------SCEE-CTTSCCBCHHHHHHHHHHSB-CTTSCBCCTTTC
T ss_pred cCCCCcCCChhhC-------ccee-CCCCCHHHHHHHHHHHHhcc-CCCCCCCCCCCC
Confidence 3468999987542 2222 36999999999987644311 011355666553
No 171
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=56.04 E-value=3.8 Score=39.81 Aligned_cols=44 Identities=27% Similarity=0.732 Sum_probs=31.4
Q ss_pred ccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCC
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 89 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C 89 (510)
-..|.+|..--- .-+.|..|+..||..|+.-+.... ..-.||.|
T Consensus 180 i~~C~iC~~iv~-------~g~~C~~C~~~~H~~C~~~~~~~~-----~~~~CP~C 223 (238)
T 3nw0_A 180 VKICNICHSLLI-------QGQSCETCGIRMHLPCVAKYFQSN-----AEPRCPHC 223 (238)
T ss_dssp CCBCTTTCSBCS-------SCEECSSSCCEECHHHHHHHTTTC-----SSCBCTTT
T ss_pred CCcCcchhhHHh-------CCcccCccChHHHHHHHHHHHHhC-----CCCCCCCC
Confidence 468999998542 347899999999999998654322 23456655
No 172
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=55.66 E-value=5.5 Score=32.88 Aligned_cols=35 Identities=20% Similarity=0.581 Sum_probs=26.3
Q ss_pred CccccccccccccccCCccCCCCcEEeC--CCCCcchhhhcCC
Q 010445 31 SNTNVMCRLCFVGENEGCERARRMLSCK--SCGKKYHRNCLKN 71 (510)
Q Consensus 31 ~~~~~~C~vC~~~G~~gs~~~eeLL~C~--~C~~~yH~~CL~~ 71 (510)
+.....|.+|...+ ..-.|.|. .|.+.||..|...
T Consensus 14 ~R~~l~C~iC~~~~------~GAciqC~~~~C~~~fHv~CA~~ 50 (87)
T 2lq6_A 14 ARWKLTCYLCKQKG------VGASIQCHKANCYTAFHVTCAQK 50 (87)
T ss_dssp CCCCCCBTTTTBCC------SSCEEECSCTTTCCEEEHHHHHH
T ss_pred HHhcCCCcCCCCCC------CcEeEecCCCCCCCcCcHHHHHH
Confidence 34467899998632 11789997 5999999999864
No 173
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=55.32 E-value=7.5 Score=32.23 Aligned_cols=45 Identities=22% Similarity=0.404 Sum_probs=30.9
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 232 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~~ 232 (510)
..|+||...+.+ .+....|.+.||..|+.. +.. ....||.|+..-
T Consensus 16 ~~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~~----~~~------~~~~CP~Cr~~~ 60 (108)
T 2ckl_A 16 LMCVLCGGYFID-----ATTIIECLHSFCKTCIVR----YLE------TSKYCPICDVQV 60 (108)
T ss_dssp TBCTTTSSBCSS-----EEEETTTCCEEEHHHHHH----HHT------SCSBCTTTCCBS
T ss_pred CCCccCChHHhC-----cCEeCCCCChhhHHHHHH----HHH------hCCcCcCCCccc
Confidence 469999887754 234457999999999752 111 137899999763
No 174
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=55.15 E-value=11 Score=30.66 Aligned_cols=42 Identities=17% Similarity=0.335 Sum_probs=19.4
Q ss_pred cccCCCCCCCCCCccccccCccccccccccccccccccccccccC
Q 010445 139 CHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYR 183 (510)
Q Consensus 139 C~~Cg~~~pgk~~s~rW~~~~~lC~~C~~~~~kg~~CpVC~r~Y~ 183 (510)
|..|+....+. ..-...+..+|..|.... -+..|..|.+...
T Consensus 36 C~~C~~~L~~~--~~~~~~g~~yC~~cy~~~-~~~~C~~C~~~I~ 77 (101)
T 2cup_A 36 CAKCLHPLANE--TFVAKDNKILCNKCTTRE-DSPKCKGCFKAIV 77 (101)
T ss_dssp CSSSCCCTTSS--CCEEETTEEECHHHHTTC-CCCBCSSSCCBCC
T ss_pred ccccCCCCCcC--eeECcCCEEEChhHhhhh-cCCccccCCCccc
Confidence 66676554321 111223445666665321 2334666665443
No 175
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=54.60 E-value=4 Score=32.73 Aligned_cols=49 Identities=20% Similarity=0.449 Sum_probs=31.4
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 232 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~~ 232 (510)
..||||...+... ....+.| .|.+.|+..|+...- ....+.||.||...
T Consensus 12 ~~CpICle~~~~~-d~~~~p~-~CGH~fC~~Cl~~~~---------~~~~~~CP~CR~~~ 60 (78)
T 1e4u_A 12 VECPLCMEPLEID-DINFFPC-TCGYQICRFCWHRIR---------TDENGLCPACRKPY 60 (78)
T ss_dssp CBCTTTCCBCCTT-TTTCCSS-TTSCCCCHHHHHHHT---------TSSCSBCTTTCCBC
T ss_pred CcCCccCccCccc-ccccccc-CCCCCcCHHHHHHHH---------hcCCCCCCCCCCcc
Confidence 4699999866322 1223334 689999999975210 12468999999864
No 176
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=54.04 E-value=4 Score=31.70 Aligned_cols=44 Identities=20% Similarity=0.383 Sum_probs=25.4
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
.|.+|...-.....+.-..|+..||..|+..-+. ....||.|..
T Consensus 17 ~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~----~~~~CP~Cr~ 60 (78)
T 2ect_A 17 ECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLE----QHDSCPVCRK 60 (78)
T ss_dssp CCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHT----TTCSCTTTCC
T ss_pred CCeeCCccccCCCCEEEeCCCCeecHHHHHHHHH----cCCcCcCcCC
Confidence 4455654433222333346899999999974332 2246777764
No 177
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=53.93 E-value=6.1 Score=30.58 Aligned_cols=46 Identities=24% Similarity=0.473 Sum_probs=30.1
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
..|+||...+.+. +.-..|.+.||..|+.. +... .....||.|+..
T Consensus 16 ~~C~IC~~~~~~p-----~~~~~CgH~fC~~Ci~~----~~~~----~~~~~CP~Cr~~ 61 (74)
T 2yur_A 16 LLCLICKDIMTDA-----VVIPCCGNSYCDECIRT----ALLE----SDEHTCPTCHQN 61 (74)
T ss_dssp GSCSSSCCCCTTC-----EECSSSCCEECTTHHHH----HHHH----SSSSCCSSSCCS
T ss_pred CCCcCCChHHhCC-----eEcCCCCCHHHHHHHHH----HHHh----cCCCcCCCCCCc
Confidence 3689998777541 33334899999999752 1110 124789999985
No 178
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=52.99 E-value=4 Score=33.35 Aligned_cols=35 Identities=20% Similarity=0.537 Sum_probs=25.2
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
....|.+|...-. +-+....|+..||..|+..+..
T Consensus 21 ~~~~C~IC~~~~~-------~p~~~~~CgH~fC~~Ci~~~~~ 55 (99)
T 2y43_A 21 DLLRCGICFEYFN-------IAMIIPQCSHNYCSLCIRKFLS 55 (99)
T ss_dssp HHTBCTTTCSBCS-------SEEECTTTCCEEEHHHHHHHHT
T ss_pred CCCCcccCChhhC-------CcCEECCCCCHhhHHHHHHHHH
Confidence 3468999987542 3333357999999999987654
No 179
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=52.74 E-value=3.4 Score=34.17 Aligned_cols=45 Identities=27% Similarity=0.672 Sum_probs=32.1
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
..|+||...+.+ .+.|-.|.+.||..|+.. +... . ...||.||..
T Consensus 23 ~~C~IC~~~~~~-----p~~~~~CgH~FC~~Ci~~----~~~~--~---~~~CP~Cr~~ 67 (100)
T 3lrq_A 23 FRCFICMEKLRD-----ARLCPHCSKLCCFSCIRR----WLTE--Q---RAQCPHCRAP 67 (100)
T ss_dssp TBCTTTCSBCSS-----EEECTTTCCEEEHHHHHH----HHHH--T---CSBCTTTCCB
T ss_pred CCCccCCccccC-----ccccCCCCChhhHHHHHH----HHHH--C---cCCCCCCCCc
Confidence 359999987754 356678999999999762 2111 1 2799999975
No 180
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=52.48 E-value=5.3 Score=34.17 Aligned_cols=45 Identities=20% Similarity=0.141 Sum_probs=23.5
Q ss_pred cccCCCCCCCCCCccccccCccccccccc-cccccccccccccccC
Q 010445 139 CHSCGSNVPGNGLSVRWFLGYTCCDACGR-LFVKGNYCPVCLKVYR 183 (510)
Q Consensus 139 C~~Cg~~~pgk~~s~rW~~~~~lC~~C~~-~~~kg~~CpVC~r~Y~ 183 (510)
|..|+......+...-+..+..+|..|.. +|.....|..|.+...
T Consensus 35 C~~C~~~L~~~~~~~~~~~g~~yC~~cy~~~f~~~~~C~~C~~~I~ 80 (122)
T 1m3v_A 35 CSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGNSGAGGSGGHMGS 80 (122)
T ss_dssp CSSSCCCTTTSEECCEEETTEEECHHHHHHHHCCCCSSSCSSCCSC
T ss_pred cCCCCCcccccCCeEEEECCeeecHHHHHHHcCCCCccccCCCCcC
Confidence 66676544211111223345677877754 3333336888877554
No 181
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=52.44 E-value=4.6 Score=33.57 Aligned_cols=35 Identities=17% Similarity=0.398 Sum_probs=25.9
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
....|.+|...-. +-+....|+..||..|+..+..
T Consensus 14 ~~~~C~IC~~~~~-------~p~~~~~CgH~fC~~Ci~~~~~ 48 (108)
T 2ckl_A 14 PHLMCVLCGGYFI-------DATTIIECLHSFCKTCIVRYLE 48 (108)
T ss_dssp GGTBCTTTSSBCS-------SEEEETTTCCEEEHHHHHHHHT
T ss_pred CcCCCccCChHHh-------CcCEeCCCCChhhHHHHHHHHH
Confidence 3468999987542 4455568999999999987643
No 182
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=52.29 E-value=4.7 Score=32.31 Aligned_cols=47 Identities=19% Similarity=0.602 Sum_probs=29.4
Q ss_pred ccccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCCC
Q 010445 32 NTNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSCR 90 (510)
Q Consensus 32 ~~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C~ 90 (510)
.....|.+|...-. +-+.-..|+..|+..|+..+.... ....||.|+
T Consensus 11 ~~~~~C~IC~~~~~-------~p~~~~~CgH~fC~~Ci~~~~~~~-----~~~~CP~Cr 57 (92)
T 3ztg_A 11 PDELLCLICKDIMT-------DAVVIPCCGNSYCDECIRTALLES-----DEHTCPTCH 57 (92)
T ss_dssp CTTTEETTTTEECS-------SCEECTTTCCEECHHHHHHHHHHC-----TTCCCTTTC
T ss_pred CcCCCCCCCChhhc-------CceECCCCCCHHHHHHHHHHHHhc-----CCCcCcCCC
Confidence 34568999997542 222333499999999998764321 234566553
No 183
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=51.99 E-value=11 Score=29.97 Aligned_cols=11 Identities=18% Similarity=0.356 Sum_probs=5.4
Q ss_pred CCCcccccccC
Q 010445 110 CDAAYHCYCQH 120 (510)
Q Consensus 110 C~~~YH~~CL~ 120 (510)
-++.||..|..
T Consensus 34 ~~~~wH~~CF~ 44 (82)
T 2co8_A 34 NGHFFHRSCFR 44 (82)
T ss_dssp TTBCCBTTTCB
T ss_pred CCCeeCCCcCE
Confidence 35556654433
No 184
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.40 E-value=4.8 Score=31.24 Aligned_cols=34 Identities=21% Similarity=0.569 Sum_probs=23.6
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
....|.+|...-.. .++ ..|+..||..|+..+..
T Consensus 18 ~~~~C~IC~~~~~~------p~~--~~CgH~fC~~Ci~~~~~ 51 (85)
T 2ecv_A 18 EEVTCPICLELLTQ------PLS--LDCGHSFCQACLTANHK 51 (85)
T ss_dssp CCCCCTTTCSCCSS------CBC--CSSSCCBCTTHHHHHHH
T ss_pred CCCCCCCCCcccCC------cee--CCCCCHHHHHHHHHHHH
Confidence 34689999985421 222 27999999999987543
No 185
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=50.84 E-value=3.7 Score=35.80 Aligned_cols=67 Identities=22% Similarity=0.406 Sum_probs=3.5
Q ss_pred cccccCccccccccccccccccccccccccCCCCCC-CceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCC
Q 010445 153 VRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSEST-PMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGE 231 (510)
Q Consensus 153 ~rW~~~~~lC~~C~~~~~kg~~CpVC~r~Y~d~e~~-~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~ 231 (510)
|+|......|..|...+.. .|++|.-.+....+. -.+.--.|.+.||..|+..- .. ....||.||..
T Consensus 42 w~wd~~~d~CaICl~~~~~--~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~W----l~------~~~~CP~Cr~~ 109 (117)
T 4a0k_B 42 WAWDIVVDNCAICRNHIMD--LCIECQANQASATSEECTVAWGVCNHAFHFHCISRW----LK------TRQVCPLDNRE 109 (117)
T ss_dssp EEECCCC-------------------------------------------------------------------------
T ss_pred EeecCCCCcCeECChhhcC--cChhhhcccccccccccccccCCcCceEcHHHHHHH----HH------cCCcCCCCCCe
Confidence 4455555556666554432 355554322111111 11222369999999998731 10 13589999975
No 186
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=50.01 E-value=2 Score=32.65 Aligned_cols=44 Identities=18% Similarity=0.261 Sum_probs=26.1
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
.|.+|...-.....+....|+..||..|+..-+.. ...||.|..
T Consensus 16 ~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~ 59 (69)
T 2kiz_A 16 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLIT----NKKCPICRV 59 (69)
T ss_dssp SBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHH----CSBCTTTCS
T ss_pred CCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHc----CCCCcCcCc
Confidence 45566544332233444569999999999853322 235887764
No 187
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=47.47 E-value=2.2 Score=31.48 Aligned_cols=40 Identities=25% Similarity=0.617 Sum_probs=26.2
Q ss_pred ccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
+..|.+|...-... ......+.-..|+..||..|+..+..
T Consensus 3 ~~~C~IC~~~~~~~-~~~~~~~~~~~CgH~fc~~Ci~~~~~ 42 (64)
T 2xeu_A 3 MVSCPICMDGYSEI-VQNGRLIVSTECGHVFCSQCLRDSLK 42 (64)
T ss_dssp CCBCTTTCCBHHHH-HHTTCCEEEETTSCEEEHHHHHHHHH
T ss_pred CCCCCccChhhhCc-cccCCCEEeCCCCCchhHHHHHHHHH
Confidence 35799998753210 00124455568999999999987654
No 188
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=46.58 E-value=3.7 Score=36.78 Aligned_cols=45 Identities=27% Similarity=0.667 Sum_probs=31.6
Q ss_pred cccccccccCCCCCCCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCCC
Q 010445 174 YCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGEC 232 (510)
Q Consensus 174 ~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~~ 232 (510)
.|+||...|.+ .+....|.+.||..|+.. +.. .....||.|+..-
T Consensus 56 ~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~~----~~~-----~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 56 MCPICLDMLKN-----TMTTKECLHRFCADCIIT----ALR-----SGNKECPTCRKKL 100 (165)
T ss_dssp BCTTTSSBCSS-----EEEETTTCCEEEHHHHHH----HHH-----TTCCBCTTTCCBC
T ss_pred CCcccChHhhC-----cCEeCCCCChhHHHHHHH----HHH-----hCcCCCCCCCCcC
Confidence 69999887754 244457999999999762 211 1257899999753
No 189
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=46.26 E-value=5.1 Score=34.97 Aligned_cols=31 Identities=16% Similarity=0.592 Sum_probs=22.0
Q ss_pred cccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCc
Q 010445 35 VMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWA 73 (510)
Q Consensus 35 ~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~ 73 (510)
..|.+|...-. +-+. ..||..||..|+..+.
T Consensus 54 ~~C~iC~~~~~-------~~~~-~~CgH~fc~~Ci~~~~ 84 (138)
T 4ayc_A 54 LQCIICSEYFI-------EAVT-LNCAHSFCSYCINEWM 84 (138)
T ss_dssp SBCTTTCSBCS-------SEEE-ETTSCEEEHHHHHHHT
T ss_pred CCCcccCcccC-------CceE-CCCCCCccHHHHHHHH
Confidence 47999987542 2222 2699999999997654
No 190
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=44.58 E-value=6.2 Score=38.26 Aligned_cols=43 Identities=23% Similarity=0.458 Sum_probs=29.9
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHT 137 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~ 137 (510)
.|.+|+...-. -..|..|+..||..|+...+.. ...-.||.|.
T Consensus 182 ~C~iC~~iv~~--g~~C~~C~~~~H~~C~~~~~~~--~~~~~CP~C~ 224 (238)
T 3nw0_A 182 ICNICHSLLIQ--GQSCETCGIRMHLPCVAKYFQS--NAEPRCPHCN 224 (238)
T ss_dssp BCTTTCSBCSS--CEECSSSCCEECHHHHHHHTTT--CSSCBCTTTC
T ss_pred cCcchhhHHhC--CcccCccChHHHHHHHHHHHHh--CCCCCCCCCC
Confidence 68888866543 3889999999999999743322 2344677665
No 191
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=44.09 E-value=11 Score=41.39 Aligned_cols=84 Identities=20% Similarity=0.324 Sum_probs=25.1
Q ss_pred ccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcccc----------ccCCCCCcCC---CCCCcCcccccC--
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNR----------DLFHWSSWKC---PSCRICEICRRT-- 98 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~----------~~~~~~~W~C---~~C~~C~vC~~~-- 98 (510)
..+|.+|..-=- +-..+=+.|..|+-..|..|.......- .....-.|.= ....+|..|+..
T Consensus 48 p~~C~~C~~~i~---g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~~~h~~~~~~~~~~~~C~~C~~~l~ 124 (674)
T 3pfq_A 48 PTFCSHCTDFIW---GFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLY 124 (674)
T ss_dssp ---------------------------------------------------------CCCCCEECCSSCCCCSSSCSCCB
T ss_pred CCcccccccccc---ccCCceeECCCCCCCcChhhcCcCcccCCCcccccccccccCCcceeecCCCCCCCCCccccccc
Confidence 458999987410 0122568899999999999987532110 0000012220 112378888654
Q ss_pred CCCcceEEcCCCCCcccccccC
Q 010445 99 GDPNKFMFCRRCDAAYHCYCQH 120 (510)
Q Consensus 99 gd~~~lL~Cd~C~~~YH~~CL~ 120 (510)
|-...-+.|..|..-+|..|..
T Consensus 125 g~~~qg~~C~~C~~~~H~~C~~ 146 (674)
T 3pfq_A 125 GLIHQGMKCDTCMMNVHKRCVM 146 (674)
T ss_dssp BSSSCEECCSSSCCCBCSSTTS
T ss_pred hhhcCccccccCCcchhhhhhh
Confidence 2222568999999999999986
No 192
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=43.76 E-value=12 Score=27.09 Aligned_cols=30 Identities=23% Similarity=0.599 Sum_probs=22.2
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGI 207 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l 207 (510)
.+|-+|.+... +-++|..|...+|..|...
T Consensus 15 t~C~~C~~~l~-----qG~~C~~C~~~~H~~C~~~ 44 (52)
T 1faq_A 15 AFCDICQKFLL-----NGFRCQTCGYKFHEHCSTK 44 (52)
T ss_dssp EECTTSSSEEC-----SEEECTTTTCCBCSTTSSS
T ss_pred cCCCCcccccc-----cCCEeCCCCCeEChhHHhh
Confidence 45666655432 4588999999999999874
No 193
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=42.98 E-value=16 Score=37.92 Aligned_cols=39 Identities=31% Similarity=0.811 Sum_probs=27.5
Q ss_pred ccccccccccccCCccCCCCcEEeC--CCCCcchhhhcCCCcc
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCK--SCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~--~C~~~yH~~CL~~~~~ 74 (510)
...|.+|.+.-..+ ..-.-..|. .|+..||..||..|..
T Consensus 308 ~~ECaICys~~l~~--g~lPdk~C~n~~C~h~FH~~CL~kWLr 348 (381)
T 3k1l_B 308 ELRCNICFAYRLDG--GEVPLVSCDNAKCVLKCHAVCLEEWFK 348 (381)
T ss_dssp CCSCSSSCCSSCTT--CCCCCBCCSCTTCCCCBCSGGGHHHHH
T ss_pred CccCcccceeecCC--CCCccccccCCccCCccchHHHHHHHH
Confidence 35899999854210 111335787 8999999999988764
No 194
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=41.52 E-value=2.7 Score=34.12 Aligned_cols=44 Identities=18% Similarity=0.232 Sum_probs=25.6
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
.|.+|...-.....+.-..|+..||..|+..-+. ..-.||.|..
T Consensus 42 ~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~----~~~~CP~Cr~ 85 (91)
T 2l0b_A 42 CCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQ----KSGTCPVCRC 85 (91)
T ss_dssp EETTTTEECCTTCEEEEETTTEEEEHHHHHHHHT----TTCBCTTTCC
T ss_pred CCcccChhhcCCCcEEecCCCChHHHHHHHHHHH----cCCcCcCcCc
Confidence 4556654333223333345999999999985332 1236777763
No 195
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=40.23 E-value=13 Score=30.72 Aligned_cols=33 Identities=27% Similarity=0.465 Sum_probs=25.2
Q ss_pred cccccccccCCCCCCCceeccCcCCcccccCCC
Q 010445 174 YCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDG 206 (510)
Q Consensus 174 ~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~ 206 (510)
+|.||.+.-.......-+.|.-|++.+|..|..
T Consensus 40 ~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~ 72 (84)
T 1r79_A 40 KCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKE 72 (84)
T ss_dssp BCSSSCCBCCCTTTCCCEEESSSCCEECHHHHH
T ss_pred EeCCCCCEeCCccCCCCCCCcccChhHHHHHHH
Confidence 688888765444455567899999999999965
No 196
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=39.59 E-value=12 Score=28.86 Aligned_cols=34 Identities=24% Similarity=0.416 Sum_probs=25.8
Q ss_pred ccccccccccccCCCCCCCceeccCcCCcccccCCC
Q 010445 171 KGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDG 206 (510)
Q Consensus 171 kg~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~ 206 (510)
+..+|.+|++.+. .+...+.|..|...+|.+|-.
T Consensus 18 ~~~~C~~Cg~~i~--~gkq~~kC~dC~~~cH~~C~~ 51 (61)
T 4b6d_A 18 KPESCVPCGKRIK--FGKLSLKCRDCRVVSHPECRD 51 (61)
T ss_dssp SCEECTTTCCEEC--TTCEEEEESSSSCEECGGGGG
T ss_pred CCcccccccCEEE--EeeEeeECCCCCCeEchhHhh
Confidence 3456777776553 455678999999999999965
No 197
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=39.52 E-value=29 Score=27.89 Aligned_cols=42 Identities=24% Similarity=0.564 Sum_probs=24.2
Q ss_pred CCCceeccCcCCcccccCCCCchHHHhh--hccCCCCceeCCCCCCCCCC
Q 010445 187 STPMVCCDVCQRWVHCQCDGISDEKYLQ--FQVDGNLQYRCPTCRGECYQ 234 (510)
Q Consensus 187 ~~~mLqCd~C~~wfH~~Cd~l~~e~y~~--~~~~~~~~Y~C~~Cr~~~~~ 234 (510)
+...+.|..|+..|-.. ..+.. ..-.+...|.|+.|......
T Consensus 63 ~~~~~~C~~C~~~f~~~------~~l~~H~~~h~~~~~~~C~~C~~~f~~ 106 (124)
T 2dlq_A 63 SEQVFTCSVCQETFRRR------MELRLHMVSHTGEMPYKCSSCSQQFMQ 106 (124)
T ss_dssp CCCCEECSSSCCEESSH------HHHHHHHHHHSSSCSEECSSSCCEESS
T ss_pred CCCCeECCCCCCccCCH------HHHHHHHHHcCCCCCccCCCccchhCC
Confidence 44567899998877522 11111 11123457999999865443
No 198
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=39.16 E-value=9 Score=32.72 Aligned_cols=28 Identities=25% Similarity=0.602 Sum_probs=22.8
Q ss_pred cccccCcccccccccccccccccccccc
Q 010445 153 VRWFLGYTCCDACGRLFVKGNYCPVCLK 180 (510)
Q Consensus 153 ~rW~~~~~lC~~C~~~~~kg~~CpVC~r 180 (510)
..|...+..|..|...|.+.-+||-|..
T Consensus 42 L~~~g~~~hC~~C~~~f~~~a~CPdC~q 69 (101)
T 2jne_A 42 LDQDNGHARCRSCGEFIEMKALCPDCHQ 69 (101)
T ss_dssp EEEETTEEEETTTCCEEEEEEECTTTCS
T ss_pred ceecCCEEECccccchhhccccCcchhh
Confidence 4677667779999998888889998875
No 199
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=38.22 E-value=8.6 Score=32.68 Aligned_cols=33 Identities=18% Similarity=0.360 Sum_probs=23.4
Q ss_pred ccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
...|.+|...-. ...+ ..||..||..|+..+..
T Consensus 52 ~~~C~IC~~~~~------~p~~--~~CgH~fC~~Ci~~~~~ 84 (124)
T 3fl2_A 52 TFQCICCQELVF------RPIT--TVCQHNVCKDCLDRSFR 84 (124)
T ss_dssp HTBCTTTSSBCS------SEEE--CTTSCEEEHHHHHHHHH
T ss_pred CCCCCcCChHHc------CcEE--eeCCCcccHHHHHHHHh
Confidence 457999987542 1222 27999999999987653
No 200
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=37.78 E-value=21 Score=30.10 Aligned_cols=43 Identities=19% Similarity=0.388 Sum_probs=21.1
Q ss_pred cccCCCCCCCCCCccccccCccccccccccccccccccccccccCC
Q 010445 139 CHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRD 184 (510)
Q Consensus 139 C~~Cg~~~pgk~~s~rW~~~~~lC~~C~~~~~kg~~CpVC~r~Y~d 184 (510)
|..|+....+. ..-...+..+|..|... ..+..|..|.+...+
T Consensus 33 C~~C~~~L~~~--~f~~~~g~~yC~~cy~~-~~~~~C~~C~~~I~~ 75 (126)
T 2xqn_T 33 CFDCDSILAGE--IYVMVNDKPVCKPCYVK-NHAVVCQGCHNAIDP 75 (126)
T ss_dssp CTTTCCBCTTS--EEEEETTEEEEHHHHHH-HSCCBCTTTCSBCCT
T ss_pred cCCCCCCCCcC--EEEeECCEEechHHhCc-CcCccCcccCCcCCc
Confidence 66666543321 11112345667666532 123457777776543
No 201
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=37.45 E-value=28 Score=27.43 Aligned_cols=40 Identities=18% Similarity=0.481 Sum_probs=22.3
Q ss_pred CceeccCcCCcccccCCCCchHHHhh--hccCCCCceeCCCCCCCCCC
Q 010445 189 PMVCCDVCQRWVHCQCDGISDEKYLQ--FQVDGNLQYRCPTCRGECYQ 234 (510)
Q Consensus 189 ~mLqCd~C~~wfH~~Cd~l~~e~y~~--~~~~~~~~Y~C~~Cr~~~~~ 234 (510)
..+.|..|...|-.. ..+.. ..-.+...|.|..|......
T Consensus 44 ~~~~C~~C~~~f~~~------~~l~~H~~~h~~~~~~~C~~C~~~f~~ 85 (106)
T 2ee8_A 44 RPYTCDICHKAFRRQ------DHLRDHRYIHSKEKPFKCQECGKGFCQ 85 (106)
T ss_dssp CCCBCSSSCCBCSCH------HHHHHHGGGSCCCCTTSCSSSCCCCSS
T ss_pred CCcCCCCccchhCCH------HHHHHHHHHhCCCCCeECCCcCCcccC
Confidence 456788888776421 11111 11223457999999876543
No 202
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=37.19 E-value=26 Score=26.78 Aligned_cols=34 Identities=24% Similarity=0.548 Sum_probs=23.6
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGI 207 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l 207 (510)
.+|-+|.+.... ...+-++|..|...+|..|...
T Consensus 24 t~C~~C~~~l~G-l~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 24 TFCEHCGTLLWG-LARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp CBCSSSCCBCCC-SSSCSEEESSSCCEECTTTTTT
T ss_pred cCchhcChhhee-cCCcccccCCCCCccCHhHHhh
Confidence 456666654421 1235688999999999999874
No 203
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=36.44 E-value=20 Score=27.61 Aligned_cols=28 Identities=14% Similarity=0.244 Sum_probs=14.4
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccC
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQH 120 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~ 120 (510)
.|..|+++..+..++.-. ++.||..|..
T Consensus 2 ~C~~C~~~I~~~~~v~a~--~~~~H~~CF~ 29 (76)
T 1iml_A 2 KCPKCDKEVYFAERVTSL--GKDWHRPCLK 29 (76)
T ss_dssp BCTTTSSBCCGGGEEEET--TEEEETTTCB
T ss_pred cCCCCCCEEECceEEEEC--CccccCCCCC
Confidence 355666655433343322 6667755544
No 204
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=35.67 E-value=19 Score=39.38 Aligned_cols=30 Identities=20% Similarity=0.434 Sum_probs=0.0
Q ss_pred cCcccccCC--CCcceEEcCCCCCcccccccC
Q 010445 91 ICEICRRTG--DPNKFMFCRRCDAAYHCYCQH 120 (510)
Q Consensus 91 ~C~vC~~~g--d~~~lL~Cd~C~~~YH~~CL~ 120 (510)
+|..|+..- --..-+.|..|+-..|..|..
T Consensus 50 ~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~ 81 (674)
T 3pfq_A 50 FCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHE 81 (674)
T ss_dssp --------------------------------
T ss_pred ccccccccccccCCceeECCCCCCCcChhhcC
Confidence 566666431 111458899999999999977
No 205
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=35.33 E-value=8.5 Score=31.71 Aligned_cols=44 Identities=16% Similarity=0.513 Sum_probs=28.0
Q ss_pred ccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCccccccCCCCCcCCCCC
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQNRDLFHWSSWKCPSC 89 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~~~~~~~~~~W~C~~C 89 (510)
...|.+|...-. +..+ ..|+..||..|+..+.... .+...||.|
T Consensus 21 ~~~C~IC~~~~~------~p~~--~~CgH~fC~~Ci~~~~~~~----~~~~~CP~C 64 (112)
T 1jm7_A 21 ILECPICLELIK------EPVS--TKCDHIFCKFCMLKLLNQK----KGPSQCPLC 64 (112)
T ss_dssp HTSCSSSCCCCS------SCCB--CTTSCCCCSHHHHHHHHSS----SSSCCCTTT
T ss_pred CCCCcccChhhc------CeEE--CCCCCHHHHHHHHHHHHhC----CCCCCCcCC
Confidence 358999987542 1222 3799999999998765422 133556654
No 206
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=34.50 E-value=11 Score=29.19 Aligned_cols=34 Identities=18% Similarity=0.490 Sum_probs=24.2
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
.+..|.+|...-. +..+. .||..|+..|+..+..
T Consensus 7 ~~~~C~IC~~~~~------~Pv~~--~CgH~fc~~Ci~~~~~ 40 (78)
T 1t1h_A 7 EYFRCPISLELMK------DPVIV--STGQTYERSSIQKWLD 40 (78)
T ss_dssp SSSSCTTTSCCCS------SEEEE--TTTEEEEHHHHHHHHT
T ss_pred ccCCCCCcccccc------CCEEc--CCCCeecHHHHHHHHH
Confidence 3468999987542 12332 6999999999987653
No 207
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=34.32 E-value=16 Score=28.00 Aligned_cols=30 Identities=20% Similarity=0.369 Sum_probs=20.3
Q ss_pred CCCCcccccccCCCCcCC---CCCCccccCCcc
Q 010445 109 RCDAAYHCYCQHPPHKNV---SSGPYLCPKHTK 138 (510)
Q Consensus 109 ~C~~~YH~~CL~P~l~~i---p~~~W~Cp~C~~ 138 (510)
.|+..||..|+..-+... ......||.|..
T Consensus 29 ~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~ 61 (79)
T 2egp_A 29 DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGI 61 (79)
T ss_dssp SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCC
T ss_pred CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCC
Confidence 688899999988654431 123567887764
No 208
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=33.92 E-value=18 Score=25.92 Aligned_cols=35 Identities=20% Similarity=0.442 Sum_probs=23.9
Q ss_pred cccccccccccCCCCCCCceeccCcCCcccccCCCC
Q 010445 172 GNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGI 207 (510)
Q Consensus 172 g~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l 207 (510)
-.+|-+|.+..-. ...+-++|..|...+|..|...
T Consensus 11 pt~C~~C~~~l~g-~~~qg~~C~~C~~~~H~~C~~~ 45 (50)
T 1ptq_A 11 PTFCDHCGSLLWG-LVKQGLKCEDCGMNVHHKCREK 45 (50)
T ss_dssp CCBCTTTCCBCCS-SSSCEEEETTTCCEECHHHHTT
T ss_pred CCCcCCCCceeec-cCCccCEeCCCCCeECHHHhhh
Confidence 3456666654421 1246688999999999999763
No 209
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=33.47 E-value=11 Score=28.16 Aligned_cols=36 Identities=17% Similarity=0.341 Sum_probs=22.9
Q ss_pred ccccccccc-cccCCccCCCCcEEeCCCCCcchhhhcCCCc
Q 010445 34 NVMCRLCFV-GENEGCERARRMLSCKSCGKKYHRNCLKNWA 73 (510)
Q Consensus 34 ~~~C~vC~~-~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~ 73 (510)
+..|.+|.. .-.+ +...+.=..||..||..|+..+.
T Consensus 3 ~~~C~IC~~~~~~~----~~~~~~~~~CgH~fC~~Ci~~~~ 39 (65)
T 1g25_A 3 DQGCPRCKTTKYRN----PSLKLMVNVCGHTLCESCVDLLF 39 (65)
T ss_dssp TTCCSTTTTHHHHC----SSCCEEECTTCCCEEHHHHHHHH
T ss_pred CCcCCcCCCCccCC----CccCeecCCCCCHhHHHHHHHHH
Confidence 357999988 3211 11211225799999999998653
No 210
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=33.26 E-value=29 Score=26.75 Aligned_cols=42 Identities=14% Similarity=0.273 Sum_probs=22.6
Q ss_pred CCceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCCCC
Q 010445 188 TPMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGECY 233 (510)
Q Consensus 188 ~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~~~ 233 (510)
...+.|..|...|-..-. +. .-.+ .-.....|.|+.|.....
T Consensus 34 ~~~~~C~~C~~~f~~~~~--l~-~H~~-~h~~~~~~~C~~C~~~f~ 75 (96)
T 2dmd_A 34 VKPYKCKTCDYAAADSSS--LN-KHLR-IHSDERPFKCQICPYASR 75 (96)
T ss_dssp CCSEECSSSCCEESSHHH--HH-HHHH-HSCCCCCEECSSSSCEES
T ss_pred CCCEeCCCCCCccCCHHH--HH-HHHH-HhCCCCCccCCCCCCccC
Confidence 345778888887742210 00 0011 122345799999976543
No 211
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.76 E-value=42 Score=25.74 Aligned_cols=12 Identities=33% Similarity=0.841 Sum_probs=6.4
Q ss_pred cCCcccccCCCC
Q 010445 134 PKHTKCHSCGSN 145 (510)
Q Consensus 134 p~C~~C~~Cg~~ 145 (510)
+.|..|..|+..
T Consensus 29 ~~CF~C~~C~~~ 40 (73)
T 1wig_A 29 PSCALCVRCGQM 40 (73)
T ss_dssp TTTSCCSSSCCC
T ss_pred CCcCEeCCCCCC
Confidence 344446666654
No 212
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=32.68 E-value=40 Score=25.85 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=22.6
Q ss_pred CCceeccCcCCcccccCCCCchHHHhhhccC-CCCceeCCCCCCCCCC
Q 010445 188 TPMVCCDVCQRWVHCQCDGISDEKYLQFQVD-GNLQYRCPTCRGECYQ 234 (510)
Q Consensus 188 ~~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~-~~~~Y~C~~Cr~~~~~ 234 (510)
...+.|..|...|-..-. +. .-.+.-.. ....|.|+.|......
T Consensus 33 ~~~~~C~~C~~~f~~~~~--l~-~H~~~h~~~~~~~~~C~~C~~~f~~ 77 (95)
T 2yt9_A 33 EKPYSCPVCGLRFKRKDR--MS-YHVRSHDGSVGKPYICQSCGKGFSR 77 (95)
T ss_dssp SCSEECSSSCCEESCHHH--HH-HHHHHHCCCCCSSBCCSSSCCCBSS
T ss_pred CCCCcCCCCCCccCCHHH--HH-HHHHHhcCCCCCceECCCccchhCC
Confidence 345778888887642210 00 00111111 1257999999876543
No 213
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.47 E-value=32 Score=27.85 Aligned_cols=35 Identities=26% Similarity=0.422 Sum_probs=24.1
Q ss_pred cccccccccccCCCCCCCceeccCcCCcccccCCCC
Q 010445 172 GNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGI 207 (510)
Q Consensus 172 g~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l 207 (510)
-.+|-+|.+..-. ...+-++|..|...+|..|...
T Consensus 28 pt~C~~C~~~l~G-l~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 28 PTFCDHCGSLLYG-LIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp CCBCSSSCCBCCC-SSSCEEECSSSCCEEETTTTTT
T ss_pred CcCCcccCccccc-cccCCCcCCCcCCccCHhHHhh
Confidence 3456666654421 1235688999999999999874
No 214
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.29 E-value=29 Score=27.71 Aligned_cols=28 Identities=21% Similarity=0.458 Sum_probs=14.2
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccC
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQH 120 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~ 120 (510)
.|..|++...+..++ ..-++.||..|..
T Consensus 17 ~C~~C~~~I~~~~~v--~a~~~~~H~~CF~ 44 (91)
T 2d8y_A 17 TCVECQKTVYPMERL--LANQQVFHISCFR 44 (91)
T ss_dssp BCTTTCCBCCTTSEE--ECSSSEEETTTCB
T ss_pred cCccCCCccCCceeE--EECCCEECCCCCe
Confidence 455566555433333 2455666755544
No 215
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=32.09 E-value=19 Score=29.93 Aligned_cols=27 Identities=15% Similarity=0.392 Sum_probs=19.5
Q ss_pred CCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 109 RCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 109 ~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
.|+..|+..|+..-+. .+...||.|..
T Consensus 32 ~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~ 58 (115)
T 3l11_A 32 PCNHTLCKPCFQSTVE---KASLCCPFCRR 58 (115)
T ss_dssp TTSCEECHHHHCCCCC---TTTSBCTTTCC
T ss_pred CCCCHHhHHHHHHHHh---HCcCCCCCCCc
Confidence 7999999999986443 23467887764
No 216
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.83 E-value=50 Score=25.41 Aligned_cols=12 Identities=17% Similarity=0.595 Sum_probs=6.8
Q ss_pred CCcccccCCCCC
Q 010445 135 KHTKCHSCGSNV 146 (510)
Q Consensus 135 ~C~~C~~Cg~~~ 146 (510)
.|..|..|+...
T Consensus 40 ~CF~C~~C~~~L 51 (80)
T 2cuq_A 40 ECLVCTGCQTPL 51 (80)
T ss_dssp TTCBCSSSCCBC
T ss_pred hhCCcccCCCcC
Confidence 344466676554
No 217
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=31.50 E-value=22 Score=32.50 Aligned_cols=13 Identities=31% Similarity=0.981 Sum_probs=7.5
Q ss_pred CCCCcCcccccCC
Q 010445 87 PSCRICEICRRTG 99 (510)
Q Consensus 87 ~~C~~C~vC~~~g 99 (510)
++|-.|..|+.+-
T Consensus 32 ~~CF~C~~C~~~L 44 (192)
T 1b8t_A 32 KSCFLCMVCKKNL 44 (192)
T ss_dssp TTTCBCTTTCCBC
T ss_pred CCCCcCcccCCcC
Confidence 5566666665543
No 218
>1j2o_A FLIN2, fusion of rhombotin-2 and LIM domain-binding protein 1; LIM-interaction-domain (LID), metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=31.35 E-value=47 Score=27.75 Aligned_cols=31 Identities=23% Similarity=0.418 Sum_probs=14.8
Q ss_pred CcccccCCCCCCCCCCccccccCcccccccc
Q 010445 136 HTKCHSCGSNVPGNGLSVRWFLGYTCCDACG 166 (510)
Q Consensus 136 C~~C~~Cg~~~pgk~~s~rW~~~~~lC~~C~ 166 (510)
|..|..|+......+...-+..+..+|..|.
T Consensus 30 CF~C~~C~~~L~~~g~~~~~~~g~~yC~~~y 60 (114)
T 1j2o_A 30 CLSCDLCGCRLGEVGRRLYYKLGRKLCRRDY 60 (114)
T ss_dssp TCCCSSSCSCCCCSSSCCCCBTTBCCCHHHH
T ss_pred cCcccccCCchhcCCCeeEEECCeeechHHH
Confidence 3336677765432121222233556777664
No 219
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.84 E-value=66 Score=24.11 Aligned_cols=22 Identities=23% Similarity=0.388 Sum_probs=15.0
Q ss_pred CCCCCccccCCcc--------cccCCCCCC
Q 010445 126 VSSGPYLCPKHTK--------CHSCGSNVP 147 (510)
Q Consensus 126 ip~~~W~Cp~C~~--------C~~Cg~~~p 147 (510)
.+.+.|.|+.|.. |..|+..++
T Consensus 7 ~~~~~W~C~~CT~~N~~~~~~C~~C~~pr~ 36 (53)
T 2d9g_A 7 GDEGYWDCSVCTFRNSAEAFKCMMCDVRKG 36 (53)
T ss_dssp SCCCCEECSSSCCEECSSCSSCSSSCCCCC
T ss_pred CCCCCcCCCCCccCCCCCCCccCCCCCcCC
Confidence 3456899999986 555555443
No 220
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=30.36 E-value=22 Score=30.63 Aligned_cols=28 Identities=18% Similarity=0.437 Sum_probs=12.8
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccC
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQH 120 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~ 120 (510)
.|..|+++.....++. .-++.||..|..
T Consensus 63 ~C~~C~~~I~~~~~v~--a~~~~wH~~CF~ 90 (123)
T 2l4z_A 63 RCAGCGGKIADRFLLY--AMDSYWHSRCLK 90 (123)
T ss_dssp BBSSSSSBCCSSSEEE--ETTEEEETTTSB
T ss_pred cCcCCCCCcCCcEEEE--eCCcEEcccccC
Confidence 4555655543322221 345566655443
No 221
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=30.16 E-value=13 Score=33.05 Aligned_cols=33 Identities=18% Similarity=0.392 Sum_probs=23.8
Q ss_pred ccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
...|.+|...-. +-+. ..|+..|+..|+..+..
T Consensus 78 ~~~C~IC~~~~~-------~pv~-~~CgH~fC~~Ci~~~~~ 110 (150)
T 1z6u_A 78 SFMCVCCQELVY-------QPVT-TECFHNVCKDCLQRSFK 110 (150)
T ss_dssp HTBCTTTSSBCS-------SEEE-CTTSCEEEHHHHHHHHH
T ss_pred CCEeecCChhhc-------CCEE-cCCCCchhHHHHHHHHH
Confidence 468999987542 2222 48999999999987654
No 222
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.80 E-value=31 Score=26.50 Aligned_cols=28 Identities=18% Similarity=0.362 Sum_probs=13.9
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccC
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQH 120 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~ 120 (510)
.|..|+++..+..++. .-++.||..|..
T Consensus 11 ~C~~C~~~I~~~~~v~--a~~~~~H~~CF~ 38 (76)
T 2cu8_A 11 KCPKCDKTVYFAEKVS--SLGKDWHKFCLK 38 (76)
T ss_dssp BCTTTCCBCCTTTEEE--ETTEEEETTTCB
T ss_pred CCcCCCCEeECCeEEE--ECCeEeeCCCCC
Confidence 4555665554333333 335666655443
No 223
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.20 E-value=31 Score=27.69 Aligned_cols=36 Identities=19% Similarity=0.464 Sum_probs=24.9
Q ss_pred ccccccccccccCCCCCCCceeccCcCCcccccCCCC
Q 010445 171 KGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGI 207 (510)
Q Consensus 171 kg~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l 207 (510)
.-.+|-+|.+.... ...+-++|..|...+|..|...
T Consensus 27 ~pt~C~~C~~~lwG-l~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 27 QPTFCSVCKDFVWG-LNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp SCCCCSSSCCCCCS-SSCCEEEETTTCCEECTTGGGT
T ss_pred CCcChhhcChhhcc-ccccccccCCcCCeeChhhhhh
Confidence 34467777664421 1245689999999999999773
No 224
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=28.94 E-value=37 Score=30.74 Aligned_cols=9 Identities=33% Similarity=0.567 Sum_probs=4.5
Q ss_pred ccccccccc
Q 010445 34 NVMCRLCFV 42 (510)
Q Consensus 34 ~~~C~vC~~ 42 (510)
..+|..|..
T Consensus 58 ~vlCg~C~~ 66 (143)
T 2dkt_A 58 EVQCINCEK 66 (143)
T ss_dssp CEEESSSCC
T ss_pred eeeecccCc
Confidence 345555554
No 225
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=28.07 E-value=31 Score=27.34 Aligned_cols=36 Identities=19% Similarity=0.476 Sum_probs=25.2
Q ss_pred ccccccccccccCCCCCCCceeccCcCCcccccCCCC
Q 010445 171 KGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGI 207 (510)
Q Consensus 171 kg~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l 207 (510)
.-.||-+|.+..-. ...+-++|..|...+|..|...
T Consensus 33 ~pt~C~~C~~~lwG-l~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 33 QPTFCSVCHEFVWG-LNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp SCEECSSSCCEECC-TTCCEEECSSSCCEEESGGGSS
T ss_pred CCcCccccChhhcc-ccccccCcCCCCCcCCHhHHhh
Confidence 34567777664422 1235688999999999999874
No 226
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=28.05 E-value=27 Score=25.93 Aligned_cols=41 Identities=20% Similarity=0.361 Sum_probs=21.3
Q ss_pred CceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCCCC
Q 010445 189 PMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGECY 233 (510)
Q Consensus 189 ~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~~~ 233 (510)
..+.|..|...|-..-. +. .-... -.+...|.|+.|.....
T Consensus 28 ~~~~C~~C~~~f~~~~~--l~-~H~~~-h~~~~~~~C~~C~~~f~ 68 (82)
T 2kmk_A 28 RPYPCQYCGKRFHQKSD--MK-KHTFI-HTGEKPHKCQVCGKAFS 68 (82)
T ss_dssp CCEECSSSCCEESSHHH--HH-HHHHH-HHTCCCEECTTTSCEES
T ss_pred CCeeCCcCChhhCCHHH--HH-HHHHH-hcCCCCCcCCCcchhhC
Confidence 45678888877642100 00 00011 11345799999976544
No 227
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=27.46 E-value=35 Score=26.92 Aligned_cols=29 Identities=21% Similarity=0.628 Sum_probs=21.1
Q ss_pred cccccccccCCCCCCCceeccCcCCcccccCCC
Q 010445 174 YCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDG 206 (510)
Q Consensus 174 ~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~ 206 (510)
||-.|.... ..+-++|..|...+|..|..
T Consensus 37 ~C~~C~~~l----~~qG~kC~~C~~~cHkkC~~ 65 (72)
T 2fnf_X 37 WCDLCGREV----LRQALRCANCKFTCHSECRS 65 (72)
T ss_dssp BCTTTSSBC----SSCCEECTTSSCEECTGGGG
T ss_pred chhhhhHHH----HhCcCccCCCCCeechhhhc
Confidence 455555444 23458999999999999976
No 228
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=26.73 E-value=27 Score=26.63 Aligned_cols=35 Identities=20% Similarity=0.442 Sum_probs=23.8
Q ss_pred cccccccccccCCCCCCCceeccCcCCcccccCCCC
Q 010445 172 GNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGI 207 (510)
Q Consensus 172 g~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~l 207 (510)
-.+|.+|...... ...+-++|..|...+|..|...
T Consensus 20 pt~C~~C~~~l~G-l~~qg~~C~~C~~~~Hk~C~~~ 54 (65)
T 3uej_A 20 PTFCDHCGSLLWG-LVKQGLKCEDCGMNVHHKCREK 54 (65)
T ss_dssp CCBCTTTCCBCCS-SSSCEEEETTTCCEECHHHHTT
T ss_pred CCcccccChhhhc-cCceeeECCCCCCeEchhHhhh
Confidence 3456666654321 1235688999999999999773
No 229
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=25.49 E-value=30 Score=28.97 Aligned_cols=32 Identities=16% Similarity=0.368 Sum_probs=21.9
Q ss_pred ccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCC
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNW 72 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~ 72 (510)
...|.+|...-. +-+.-..||..|+..|+..+
T Consensus 22 ~~~C~IC~~~~~-------~pv~~~~CgH~fC~~Ci~~~ 53 (117)
T 1jm7_B 22 LLRCSRCTNILR-------EPVCLGGCEHIFCSNCVSDC 53 (117)
T ss_dssp TTSCSSSCSCCS-------SCBCCCSSSCCBCTTTGGGG
T ss_pred CCCCCCCChHhh-------CccEeCCCCCHHHHHHHHHH
Confidence 468999987542 22222268999999999764
No 230
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=25.09 E-value=12 Score=33.11 Aligned_cols=34 Identities=24% Similarity=0.546 Sum_probs=24.9
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
.+..|.+|...-. +-+. ..||..|+..|+..+..
T Consensus 30 ~~~~C~IC~~~~~-------~pv~-~~CgH~FC~~Ci~~~~~ 63 (141)
T 3knv_A 30 AKYLCSACRNVLR-------RPFQ-AQCGHRYCSFCLASILS 63 (141)
T ss_dssp GGGBCTTTCSBCS-------SEEE-CTTSCEEEHHHHHHHGG
T ss_pred cCcCCCCCChhhc-------CcEE-CCCCCccCHHHHHHHHh
Confidence 4568999997542 2233 48999999999987653
No 231
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=25.07 E-value=31 Score=26.50 Aligned_cols=33 Identities=21% Similarity=0.488 Sum_probs=22.2
Q ss_pred ccccccccccCCCCCCCceeccCcCCcccccCCC
Q 010445 173 NYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDG 206 (510)
Q Consensus 173 ~~CpVC~r~Y~d~e~~~mLqCd~C~~wfH~~Cd~ 206 (510)
.+|-+|.+..-. -..+-++|..|...+|..|..
T Consensus 25 t~C~~C~~~l~G-l~~qg~~C~~C~~~~Hk~C~~ 57 (66)
T 1y8f_A 25 TYCYECEGLLWG-IARQGMRCTECGVKCHEKCQD 57 (66)
T ss_dssp CCCTTTCCCCCS-SCCEEEEETTTCCEECTTHHH
T ss_pred cChhhcChhhcc-cCcceeEcCCCCCeeCHHHHh
Confidence 456666554311 123557899999999999976
No 232
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=24.87 E-value=69 Score=24.36 Aligned_cols=12 Identities=25% Similarity=0.659 Sum_probs=6.6
Q ss_pred CCcccccCCCCC
Q 010445 135 KHTKCHSCGSNV 146 (510)
Q Consensus 135 ~C~~C~~Cg~~~ 146 (510)
.|..|..|+...
T Consensus 45 ~CF~C~~C~~~L 56 (77)
T 2egq_A 45 YCFHCKKCSVNL 56 (77)
T ss_dssp TTCBCSSSCCBC
T ss_pred ccCEehhcCCCC
Confidence 344466676544
No 233
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=24.76 E-value=15 Score=30.07 Aligned_cols=44 Identities=23% Similarity=0.520 Sum_probs=24.9
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
.|.+|...-.. .++ ..|+..||..|+..-+... .+...||.|..
T Consensus 23 ~C~IC~~~~~~-p~~--~~CgH~fC~~Ci~~~~~~~-~~~~~CP~Cr~ 66 (112)
T 1jm7_A 23 ECPICLELIKE-PVS--TKCDHIFCKFCMLKLLNQK-KGPSQCPLCKN 66 (112)
T ss_dssp SCSSSCCCCSS-CCB--CTTSCCCCSHHHHHHHHSS-SSSCCCTTTSC
T ss_pred CCcccChhhcC-eEE--CCCCCHHHHHHHHHHHHhC-CCCCCCcCCCC
Confidence 34455544322 222 2689999999987433221 23467887764
No 234
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.68 E-value=63 Score=24.92 Aligned_cols=13 Identities=15% Similarity=0.519 Sum_probs=7.5
Q ss_pred cCCcccccCCCCC
Q 010445 134 PKHTKCHSCGSNV 146 (510)
Q Consensus 134 p~C~~C~~Cg~~~ 146 (510)
+.|..|..|+...
T Consensus 41 ~~CF~C~~C~~~L 53 (82)
T 1x63_A 41 KDCFTCSNCKQVI 53 (82)
T ss_dssp TTTCCCSSSCCCC
T ss_pred cccCchhhCCCcc
Confidence 4455577777554
No 235
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=24.58 E-value=24 Score=29.71 Aligned_cols=34 Identities=15% Similarity=0.646 Sum_probs=24.5
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
....|.+|...-. +-+. ..|+..|+..|+..+..
T Consensus 17 ~~~~C~IC~~~~~-------~p~~-~~CgH~fC~~Ci~~~~~ 50 (118)
T 3hct_A 17 SKYECPICLMALR-------EAVQ-TPCGHRFCKACIIKSIR 50 (118)
T ss_dssp GGGBCTTTCSBCS-------SEEE-CTTSCEEEHHHHHHHHH
T ss_pred CCCCCCcCChhhc-------CeEE-CCcCChhhHHHHHHHHh
Confidence 4569999997542 2233 37999999999987654
No 236
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.48 E-value=44 Score=26.22 Aligned_cols=28 Identities=18% Similarity=0.451 Sum_probs=12.2
Q ss_pred cCcccccCCCCcceEEcCCCCCcccccccC
Q 010445 91 ICEICRRTGDPNKFMFCRRCDAAYHCYCQH 120 (510)
Q Consensus 91 ~C~vC~~~gd~~~lL~Cd~C~~~YH~~CL~ 120 (510)
.|..|++...+..++. .-++.||..|..
T Consensus 17 ~C~~C~~~I~~~~~v~--a~~~~wH~~CF~ 44 (80)
T 2dj7_A 17 HCAGCKEEIKHGQSLL--ALDKQWHVSCFK 44 (80)
T ss_dssp CCTTTCCCCSSSCCEE--ETTEEECTTTCB
T ss_pred CCcCcCCeeCCCeEEE--ECCcccccccCC
Confidence 3444555443222222 234566654443
No 237
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=24.47 E-value=43 Score=24.37 Aligned_cols=23 Identities=17% Similarity=0.351 Sum_probs=15.0
Q ss_pred CCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 109 RCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 109 ~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
.|+..|+..|+.. ....||.|..
T Consensus 23 ~CgH~fC~~Ci~~-------~~~~CP~Cr~ 45 (56)
T 1bor_A 23 PCLHTLCSGCLEA-------SGMQCPICQA 45 (56)
T ss_dssp TTSCCSBTTTCSS-------SSSSCSSCCS
T ss_pred CCCCcccHHHHcc-------CCCCCCcCCc
Confidence 4777777778764 2346777764
No 238
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.16 E-value=56 Score=24.62 Aligned_cols=12 Identities=17% Similarity=0.625 Sum_probs=6.5
Q ss_pred CCcccccCCCCC
Q 010445 135 KHTKCHSCGSNV 146 (510)
Q Consensus 135 ~C~~C~~Cg~~~ 146 (510)
.|..|..|+...
T Consensus 34 ~CF~C~~C~~~L 45 (72)
T 1x4l_A 34 DCFNCKKCSLSL 45 (72)
T ss_dssp TTCBCSSSCCBC
T ss_pred ccCEeccCCCcC
Confidence 344466676543
No 239
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=24.15 E-value=17 Score=30.27 Aligned_cols=33 Identities=18% Similarity=0.449 Sum_probs=24.2
Q ss_pred ccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCCcc
Q 010445 34 NVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNWAQ 74 (510)
Q Consensus 34 ~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~~~ 74 (510)
...|.+|...-. +-+. ..|+..||..|+..+..
T Consensus 23 ~~~C~IC~~~~~-------~p~~-~~CgH~fC~~Ci~~~~~ 55 (116)
T 1rmd_A 23 SISCQICEHILA-------DPVE-TSCKHLFCRICILRCLK 55 (116)
T ss_dssp HTBCTTTCSBCS-------SEEE-CTTSCEEEHHHHHHHHH
T ss_pred CCCCCCCCcHhc-------CcEE-cCCCCcccHHHHHHHHh
Confidence 468999987542 2233 48999999999987654
No 240
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=24.06 E-value=51 Score=24.16 Aligned_cols=33 Identities=18% Similarity=0.464 Sum_probs=18.0
Q ss_pred EEcCCCCCcccccccCC-CCcCCCCCCccccCCcc
Q 010445 105 MFCRRCDAAYHCYCQHP-PHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 105 L~Cd~C~~~YH~~CL~P-~l~~ip~~~W~Cp~C~~ 138 (510)
-+|..|+-.|...=-+| +...+ ...|.||.|-.
T Consensus 5 y~C~vCGyvyd~~~Gd~t~f~~l-P~dw~CP~Cg~ 38 (46)
T 6rxn_A 5 YVCNVCGYEYDPAEHDNVPFDQL-PDDWCCPVCGV 38 (46)
T ss_dssp EEETTTCCEECGGGGTTCCGGGS-CTTCBCTTTCC
T ss_pred EECCCCCeEEeCCcCCCcchhhC-CCCCcCcCCCC
Confidence 45666776665432222 11223 35699998863
No 241
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=23.58 E-value=38 Score=22.93 Aligned_cols=17 Identities=29% Similarity=1.267 Sum_probs=12.0
Q ss_pred CCcCCCCCC--------cCcccccC
Q 010445 82 SSWKCPSCR--------ICEICRRT 98 (510)
Q Consensus 82 ~~W~C~~C~--------~C~vC~~~ 98 (510)
+.|.|+.|. .|..|+.+
T Consensus 5 gDW~C~~C~~~Nfa~R~~C~~C~~p 29 (33)
T 2k1p_A 5 NDWQCKTCSNVNWARRSECNMCNTP 29 (33)
T ss_dssp SSCBCSSSCCBCCTTCSBCSSSCCB
T ss_pred CCcccCCCCCccccccccccccCCc
Confidence 789999884 56666544
No 242
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=23.53 E-value=46 Score=26.41 Aligned_cols=11 Identities=27% Similarity=0.649 Sum_probs=6.1
Q ss_pred CcccccCCCCC
Q 010445 136 HTKCHSCGSNV 146 (510)
Q Consensus 136 C~~C~~Cg~~~ 146 (510)
|..|..|+...
T Consensus 51 CF~C~~C~~~L 61 (89)
T 1x64_A 51 CFVCADCNLNL 61 (89)
T ss_dssp TCCCSSSCCCT
T ss_pred CCEecCCCCCC
Confidence 33366676554
No 243
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=23.25 E-value=29 Score=24.05 Aligned_cols=14 Identities=21% Similarity=0.574 Sum_probs=9.7
Q ss_pred CCceeCCCCCCCCC
Q 010445 220 NLQYRCPTCRGECY 233 (510)
Q Consensus 220 ~~~Y~C~~Cr~~~~ 233 (510)
...|.|+.|.....
T Consensus 30 ~~~~~C~~C~~~f~ 43 (57)
T 3uk3_C 30 EKPYKCEFCEYAAA 43 (57)
T ss_dssp CCCEECSSSSCEES
T ss_pred CCCcCCCCCcchhC
Confidence 34688998876544
No 244
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=22.63 E-value=24 Score=28.39 Aligned_cols=15 Identities=20% Similarity=0.623 Sum_probs=10.0
Q ss_pred CCceeCCCCCCCCCC
Q 010445 220 NLQYRCPTCRGECYQ 234 (510)
Q Consensus 220 ~~~Y~C~~Cr~~~~~ 234 (510)
+..|.|..|......
T Consensus 54 ~k~~~C~~C~k~F~~ 68 (85)
T 2lv2_A 54 AQVFPCKYCPATFYS 68 (85)
T ss_dssp SSSEECTTSSCEESS
T ss_pred CCccCCCCCCCEeCC
Confidence 446888888765544
No 245
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=22.40 E-value=28 Score=23.41 Aligned_cols=17 Identities=29% Similarity=0.897 Sum_probs=12.3
Q ss_pred CCcCCCCCC--------cCcccccC
Q 010445 82 SSWKCPSCR--------ICEICRRT 98 (510)
Q Consensus 82 ~~W~C~~C~--------~C~vC~~~ 98 (510)
+.|.|+.|. .|+.|+.+
T Consensus 4 gDW~C~~C~~~Nfa~r~~C~~C~~p 28 (32)
T 2lk0_A 4 EDWLCNKCCLNNFRKRLKCFRCGAD 28 (32)
T ss_dssp SEEECTTTCCEEETTCCBCTTTCCB
T ss_pred CCCCcCcCcCCcChhcceecCCCCc
Confidence 789999885 56666644
No 246
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.35 E-value=41 Score=26.76 Aligned_cols=11 Identities=18% Similarity=0.694 Sum_probs=5.8
Q ss_pred CcccccCCCCC
Q 010445 136 HTKCHSCGSNV 146 (510)
Q Consensus 136 C~~C~~Cg~~~ 146 (510)
|..|..|+...
T Consensus 51 CF~C~~C~~~L 61 (90)
T 2dar_A 51 EFNCAHCKNTM 61 (90)
T ss_dssp TCBCSSSCCBC
T ss_pred CCccCCCCCCC
Confidence 33366676543
No 247
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=21.72 E-value=11 Score=31.99 Aligned_cols=27 Identities=15% Similarity=0.373 Sum_probs=18.9
Q ss_pred CCCCcccccccCCCCcCCCCCCccccCCcc
Q 010445 109 RCDAAYHCYCQHPPHKNVSSGPYLCPKHTK 138 (510)
Q Consensus 109 ~C~~~YH~~CL~P~l~~ip~~~W~Cp~C~~ 138 (510)
.|+..||..|+..-+. .....||.|..
T Consensus 69 ~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~ 95 (124)
T 3fl2_A 69 VCQHNVCKDCLDRSFR---AQVFSCPACRY 95 (124)
T ss_dssp TTSCEEEHHHHHHHHH---TTCCBCTTTCC
T ss_pred eCCCcccHHHHHHHHh---HCcCCCCCCCc
Confidence 7899999999874332 23457888764
No 248
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=21.58 E-value=28 Score=27.62 Aligned_cols=26 Identities=15% Similarity=0.244 Sum_probs=11.7
Q ss_pred ccccccccCCCCCCCceeccCcCCcc
Q 010445 175 CPVCLKVYRDSESTPMVCCDVCQRWV 200 (510)
Q Consensus 175 CpVC~r~Y~d~e~~~mLqCd~C~~wf 200 (510)
||+|.....-......+.|..|..+|
T Consensus 11 CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (69)
T 2pk7_A 11 CPICKGPLKLSADKTELISKGAGLAY 36 (69)
T ss_dssp CTTTCCCCEECTTSSEEEETTTTEEE
T ss_pred CCCCCCcCeEeCCCCEEEcCCCCcEe
Confidence 55555433222222344455555555
No 249
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=21.39 E-value=42 Score=22.97 Aligned_cols=11 Identities=27% Similarity=0.474 Sum_probs=8.7
Q ss_pred CCCccccCCcc
Q 010445 128 SGPYLCPKHTK 138 (510)
Q Consensus 128 ~~~W~Cp~C~~ 138 (510)
.+.|-|+.|..
T Consensus 5 ~g~W~C~~C~~ 15 (33)
T 3gj3_B 5 SGTWDCDTCLV 15 (33)
T ss_dssp -CCEECTTTCC
T ss_pred CCceeCCcccC
Confidence 57899999986
No 250
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=21.26 E-value=68 Score=25.36 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=22.2
Q ss_pred CceeccCcCCcccccCCCCchHHHhhhccCCCCceeCCCCCCCCC
Q 010445 189 PMVCCDVCQRWVHCQCDGISDEKYLQFQVDGNLQYRCPTCRGECY 233 (510)
Q Consensus 189 ~mLqCd~C~~wfH~~Cd~l~~e~y~~~~~~~~~~Y~C~~Cr~~~~ 233 (510)
..+.|..|...|...- .-...+..-.+...|.|+.|.....
T Consensus 36 ~~~~C~~C~~~f~~~~----~l~~H~~~h~~~~~~~C~~C~~~f~ 76 (110)
T 2csh_A 36 RPYGCGVCGKKFKMKH----HLVGHMKIHTGIKPYECNICAKRFM 76 (110)
T ss_dssp CSEECTTTSCEESSSH----HHHHHHTTTCCCCCEECSSSCCEES
T ss_pred cCccCCCCCcccCCHH----HHHHHHHHcCCCCCeeCCCCcchhc
Confidence 4567888887765221 1011111122345799999987544
No 251
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=21.16 E-value=25 Score=27.86 Aligned_cols=26 Identities=19% Similarity=0.312 Sum_probs=11.6
Q ss_pred ccccccccCCCCCCCceeccCcCCcc
Q 010445 175 CPVCLKVYRDSESTPMVCCDVCQRWV 200 (510)
Q Consensus 175 CpVC~r~Y~d~e~~~mLqCd~C~~wf 200 (510)
||+|.....-......+.|..|..+|
T Consensus 11 CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (68)
T 2hf1_A 11 CPLCKGPLVFDKSKDELICKGDRLAF 36 (68)
T ss_dssp CTTTCCBCEEETTTTEEEETTTTEEE
T ss_pred CCCCCCcCeEeCCCCEEEcCCCCcEe
Confidence 55555433222122334455555555
No 252
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=21.03 E-value=33 Score=28.87 Aligned_cols=39 Identities=18% Similarity=0.379 Sum_probs=26.5
Q ss_pred cccccccccccccCCccCCCCcEEeCCCCCcchhhhcCCC
Q 010445 33 TNVMCRLCFVGENEGCERARRMLSCKSCGKKYHRNCLKNW 72 (510)
Q Consensus 33 ~~~~C~vC~~~G~~gs~~~eeLL~C~~C~~~yH~~CL~~~ 72 (510)
+..+|++|+..= +.....+.++-|..|+=+.-..|+...
T Consensus 15 ~~qiCqiCGD~V-G~~~~Ge~FVAC~eC~FPvCrpCyEYE 53 (93)
T 1weo_A 15 DGQFCEICGDQI-GLTVEGDLFVACNECGFPACRPCYEYE 53 (93)
T ss_dssp SSCBCSSSCCBC-CBCSSSSBCCSCSSSCCCCCHHHHHHH
T ss_pred CCCccccccCcc-ccCCCCCEEEeeeccCChhhHHHHHHH
Confidence 457999998742 123445578888888877666776653
No 253
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=20.78 E-value=25 Score=27.76 Aligned_cols=11 Identities=0% Similarity=-0.233 Sum_probs=5.5
Q ss_pred ceeccCcCCcc
Q 010445 190 MVCCDVCQRWV 200 (510)
Q Consensus 190 mLqCd~C~~wf 200 (510)
.+.|..|..+|
T Consensus 26 ~LiC~~cg~~Y 36 (68)
T 2jr6_A 26 ELWSRQAKLAY 36 (68)
T ss_dssp EEEETTTTEEE
T ss_pred EEEcCCCCcEe
Confidence 34455555554
No 254
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=20.62 E-value=22 Score=40.18 Aligned_cols=65 Identities=20% Similarity=0.477 Sum_probs=33.7
Q ss_pred CCCCCccccCCcccccCCCCCCCCCCccccccCcccccccccccccc---------------ccccccccccCCCC----
Q 010445 126 VSSGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKG---------------NYCPVCLKVYRDSE---- 186 (510)
Q Consensus 126 ip~~~W~Cp~C~~C~~Cg~~~pgk~~s~rW~~~~~lC~~C~~~~~kg---------------~~CpVC~r~Y~d~e---- 186 (510)
+|.+--.|+.|.. ..-...+-|+..++..|..|..-|.-- -.|+-|.+-|.+..
T Consensus 102 i~pD~a~C~~Cl~-------e~~dp~~rry~ypF~nCt~CGPR~tii~~lPYDR~~TsM~~F~mC~~C~~EY~dp~dRRf 174 (772)
T 4g9i_A 102 IPPDIAICDDCLR-------ELFDPTNKRYMYPFIVCTNCGPRFTIIEDLPYDRENTTMKEFPMCDFCRSEYEDPLNRRY 174 (772)
T ss_dssp CCCCCCCCHHHHH-------HHSSTTSTTTTCTTCCCTTSSCCGGGCCSSSCCGGGSGGGGSCCCHHHHHHHHCSSSTTT
T ss_pred cCCchhhhHHHHH-------HhcCCCCCccCCccccCCCCCchhhhhhcCCCCCCCCcCCCCCCChhHHHHhCCCCCCCC
Confidence 4556667777764 001112345666777777776433211 12777777675432
Q ss_pred CCCceeccCcC
Q 010445 187 STPMVCCDVCQ 197 (510)
Q Consensus 187 ~~~mLqCd~C~ 197 (510)
+-+.+.|..|.
T Consensus 175 hAqp~aC~~CG 185 (772)
T 4g9i_A 175 HAEPTACPVCG 185 (772)
T ss_dssp TCTTCCCTTTS
T ss_pred cCCCCCCccCC
Confidence 33445555553
No 255
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=20.59 E-value=36 Score=29.27 Aligned_cols=13 Identities=15% Similarity=0.416 Sum_probs=8.1
Q ss_pred CceeccCcCCccc
Q 010445 189 PMVCCDVCQRWVH 201 (510)
Q Consensus 189 ~mLqCd~C~~wfH 201 (510)
....|+.|+..|-
T Consensus 49 k~~~C~~C~k~F~ 61 (133)
T 2lt7_A 49 KKYPCRYCEKVFP 61 (133)
T ss_dssp SCEECSSSSCEES
T ss_pred CCeeCCccCeecc
Confidence 4456777776664
No 256
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=20.27 E-value=26 Score=39.62 Aligned_cols=66 Identities=23% Similarity=0.429 Sum_probs=34.3
Q ss_pred CCCCCCccccCCcccccCCCCCCCCCCccccccCcccccccccccccc---------------ccccccccccCCCC---
Q 010445 125 NVSSGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKG---------------NYCPVCLKVYRDSE--- 186 (510)
Q Consensus 125 ~ip~~~W~Cp~C~~C~~Cg~~~pgk~~s~rW~~~~~lC~~C~~~~~kg---------------~~CpVC~r~Y~d~e--- 186 (510)
.++.+--.|+.|.. ..-...+-|+..++..|..|..-|.-- ..|+-|.+-|.+..
T Consensus 106 ~i~pD~a~C~~Cl~-------e~~dp~~Rry~ypF~nCt~CGPR~tii~~lPYDR~~TsM~~F~mC~~C~~EY~dp~~RR 178 (761)
T 3vth_A 106 PVSPDMGVCEDCLR-------ELKDPKDRRYRYPFINCTNCGPRFSIIEDIPYDRAKTSMKVFPMCEKCSREYHDPHDRR 178 (761)
T ss_dssp CCCCCBCCCHHHHH-------HHTCTTSTTTTCTTCCBTTBBCSGGGBCSSSCCGGGBGGGGSCCCHHHHHHHTCTTSTT
T ss_pred ccCCCccccHHHHH-------HhcCCCccccCCCcccCCCCCcchhhhccCCCCCCCCccccCCCCHHHHHHhcCccccc
Confidence 34555566777764 011112345666777777776433211 12777777776543
Q ss_pred -CCCceeccCcC
Q 010445 187 -STPMVCCDVCQ 197 (510)
Q Consensus 187 -~~~mLqCd~C~ 197 (510)
+-+-+.|..|.
T Consensus 179 fhAqp~aC~~CG 190 (761)
T 3vth_A 179 FHAQPVACFDCG 190 (761)
T ss_dssp TTCTTCCCTTTS
T ss_pred ccCCCCcCCccC
Confidence 23445555553
No 257
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=20.07 E-value=36 Score=25.70 Aligned_cols=20 Identities=20% Similarity=0.600 Sum_probs=16.7
Q ss_pred CCceeccCcCCcccccCCCC
Q 010445 188 TPMVCCDVCQRWVHCQCDGI 207 (510)
Q Consensus 188 ~~mLqCd~C~~wfH~~Cd~l 207 (510)
.+.++|..|...+|..|...
T Consensus 34 kqg~kC~~C~~~cH~kC~~~ 53 (59)
T 1rfh_A 34 RQALRCANCKFTCHSECRSL 53 (59)
T ss_dssp SCCEECTTTSCEECHHHHTT
T ss_pred hCccEeCCCCCeEehhhhhh
Confidence 34589999999999999763
Done!