Query 010446
Match_columns 510
No_of_seqs 1185 out of 2911
Neff 11.5
Searched_HMMs 29240
Date Mon Mar 25 06:59:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010446.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010446hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sf4_A G-protein-signaling mod 100.0 9.6E-30 3.3E-34 243.1 41.3 342 119-482 10-372 (406)
2 1w3b_A UDP-N-acetylglucosamine 100.0 5.4E-30 1.8E-34 243.4 35.1 301 119-486 68-368 (388)
3 4a1s_A PINS, partner of inscut 100.0 6.8E-29 2.3E-33 237.7 38.4 316 158-490 44-376 (411)
4 1w3b_A UDP-N-acetylglucosamine 100.0 3.6E-29 1.2E-33 237.7 36.0 291 129-486 44-334 (388)
5 3sf4_A G-protein-signaling mod 100.0 6.5E-29 2.2E-33 237.4 36.8 315 159-490 6-340 (406)
6 3ro2_A PINS homolog, G-protein 100.0 3.9E-28 1.4E-32 225.5 38.0 311 162-489 5-335 (338)
7 3ieg_A DNAJ homolog subfamily 100.0 8.1E-28 2.8E-32 225.6 39.1 312 118-487 3-336 (359)
8 4a1s_A PINS, partner of inscut 100.0 1.1E-27 3.7E-32 229.4 39.0 312 116-447 46-375 (411)
9 3ro2_A PINS homolog, G-protein 100.0 2.8E-27 9.4E-32 219.8 37.7 310 118-447 5-335 (338)
10 3ulq_A Response regulator aspa 100.0 4.6E-27 1.6E-31 222.6 39.0 354 117-495 11-377 (383)
11 2y4t_A DNAJ homolog subfamily 100.0 3.1E-27 1E-31 229.1 37.7 313 116-486 24-358 (450)
12 3fp2_A TPR repeat-containing p 100.0 3.8E-26 1.3E-30 226.6 35.4 207 246-488 277-493 (537)
13 1fch_A Peroxisomal targeting s 100.0 2.2E-27 7.4E-32 223.7 24.5 316 127-494 34-367 (368)
14 2xpi_A Anaphase-promoting comp 100.0 2.4E-25 8.2E-30 223.9 40.3 319 118-487 200-580 (597)
15 3q15_A PSP28, response regulat 100.0 1.5E-25 5.1E-30 211.6 35.7 350 117-495 11-374 (378)
16 3hym_B Cell division cycle pro 100.0 2.6E-26 8.8E-31 212.8 28.7 297 120-474 24-322 (330)
17 4eqf_A PEX5-related protein; a 100.0 8.4E-27 2.9E-31 219.4 23.7 296 160-494 63-364 (365)
18 3ulq_A Response regulator aspa 100.0 1.4E-24 4.8E-29 205.5 39.0 271 163-450 104-374 (383)
19 3nf1_A KLC 1, kinesin light ch 100.0 1.6E-25 5.5E-30 205.5 31.2 284 195-488 19-309 (311)
20 2gw1_A Mitochondrial precursor 100.0 2.2E-25 7.4E-30 219.9 33.8 320 117-489 5-404 (514)
21 4eqf_A PEX5-related protein; a 100.0 3.6E-26 1.2E-30 215.1 26.2 285 121-448 68-360 (365)
22 2gw1_A Mitochondrial precursor 100.0 1.6E-25 5.4E-30 220.9 31.7 322 118-486 39-444 (514)
23 2xpi_A Anaphase-promoting comp 99.9 6.7E-25 2.3E-29 220.6 35.0 316 86-468 280-595 (597)
24 4g1t_A Interferon-induced prot 99.9 8.1E-25 2.8E-29 213.4 34.3 335 121-489 54-462 (472)
25 3ieg_A DNAJ homolog subfamily 99.9 3.1E-24 1.1E-28 201.1 37.0 295 119-471 38-354 (359)
26 2y4t_A DNAJ homolog subfamily 99.9 1.3E-24 4.3E-29 210.7 34.6 310 118-485 60-409 (450)
27 3nf1_A KLC 1, kinesin light ch 99.9 9.4E-25 3.2E-29 200.4 31.7 283 155-445 20-308 (311)
28 3hym_B Cell division cycle pro 99.9 1.6E-25 5.6E-30 207.3 24.5 279 159-486 19-299 (330)
29 3q15_A PSP28, response regulat 99.9 1.4E-23 4.6E-28 198.2 36.5 268 162-450 101-371 (378)
30 1fch_A Peroxisomal targeting s 99.9 4.9E-25 1.7E-29 207.6 26.5 281 121-450 67-365 (368)
31 4g1t_A Interferon-induced prot 99.9 1.9E-24 6.5E-29 210.8 29.0 310 131-486 24-363 (472)
32 3edt_B KLC 2, kinesin light ch 99.9 1.7E-24 5.7E-29 195.7 26.1 271 213-487 11-282 (283)
33 3cv0_A Peroxisome targeting si 99.9 1.5E-24 5E-29 200.6 25.4 287 160-495 19-324 (327)
34 3edt_B KLC 2, kinesin light ch 99.9 5.7E-24 2E-28 192.2 27.4 270 172-444 11-281 (283)
35 3cv0_A Peroxisome targeting si 99.9 3.9E-24 1.3E-28 197.8 26.8 279 121-450 24-321 (327)
36 1hz4_A MALT regulatory protein 99.9 1.2E-22 3.9E-27 191.7 37.3 312 161-489 13-325 (373)
37 1hz4_A MALT regulatory protein 99.9 6.4E-22 2.2E-26 186.6 38.8 310 118-447 14-325 (373)
38 3fp2_A TPR repeat-containing p 99.9 4.5E-23 1.5E-27 204.5 30.5 312 121-490 21-411 (537)
39 3uq3_A Heat shock protein STI1 99.9 2.1E-21 7.1E-26 172.8 33.6 254 159-465 2-255 (258)
40 3uq3_A Heat shock protein STI1 99.9 6.3E-22 2.1E-26 176.2 29.5 253 117-424 4-256 (258)
41 3u4t_A TPR repeat-containing p 99.9 6.3E-23 2.2E-27 184.4 22.4 261 162-468 3-266 (272)
42 2h6f_A Protein farnesyltransfe 99.9 2.4E-22 8.2E-27 187.3 25.6 255 158-470 93-366 (382)
43 3u4t_A TPR repeat-containing p 99.9 1.9E-22 6.6E-27 181.2 21.4 259 120-426 5-266 (272)
44 2h6f_A Protein farnesyltransfe 99.9 7.9E-22 2.7E-26 183.8 23.5 235 198-483 92-344 (382)
45 2pl2_A Hypothetical conserved 99.9 4.8E-22 1.6E-26 171.6 20.1 197 245-484 5-212 (217)
46 2pl2_A Hypothetical conserved 99.9 6.7E-22 2.3E-26 170.7 18.7 200 159-400 2-212 (217)
47 2xm6_A Protein corresponding t 99.9 9.7E-20 3.3E-24 178.0 35.7 284 121-487 114-433 (490)
48 3mkr_A Coatomer subunit epsilo 99.9 6.4E-20 2.2E-24 165.5 31.0 281 124-479 5-287 (291)
49 2xm6_A Protein corresponding t 99.9 1.7E-19 5.9E-24 176.2 34.9 284 119-485 76-395 (490)
50 3mkr_A Coatomer subunit epsilo 99.9 1.9E-19 6.6E-24 162.4 28.5 261 171-497 8-270 (291)
51 1ouv_A Conserved hypothetical 99.9 2.3E-19 7.8E-24 161.1 28.2 223 202-486 5-251 (273)
52 1qqe_A Vesicular transport pro 99.9 8.4E-20 2.9E-24 165.4 24.0 225 206-443 40-268 (292)
53 1xnf_A Lipoprotein NLPI; TPR, 99.9 1.1E-19 3.9E-24 163.3 24.0 256 171-480 14-269 (275)
54 1qqe_A Vesicular transport pro 99.9 1.1E-19 3.9E-24 164.5 23.9 233 218-484 32-267 (292)
55 2ifu_A Gamma-SNAP; membrane fu 99.9 3.1E-19 1.1E-23 162.9 26.5 248 215-478 3-253 (307)
56 2ifu_A Gamma-SNAP; membrane fu 99.9 3.4E-19 1.2E-23 162.6 26.1 247 174-436 3-253 (307)
57 1ouv_A Conserved hypothetical 99.9 4.5E-19 1.5E-23 159.2 26.6 225 159-444 3-251 (273)
58 4abn_A Tetratricopeptide repea 99.8 2.7E-19 9.4E-24 173.2 22.4 205 197-441 96-318 (474)
59 2q7f_A YRRB protein; TPR, prot 99.8 2.7E-19 9.2E-24 157.6 20.6 219 202-470 22-240 (243)
60 4abn_A Tetratricopeptide repea 99.8 4.3E-19 1.5E-23 171.8 22.8 240 117-398 53-317 (474)
61 2q7f_A YRRB protein; TPR, prot 99.8 3.1E-19 1.1E-23 157.2 19.3 220 159-427 20-239 (243)
62 3vtx_A MAMA; tetratricopeptide 99.8 1.2E-18 4.1E-23 146.3 21.9 169 286-488 4-172 (184)
63 2ho1_A Type 4 fimbrial biogene 99.8 4.9E-18 1.7E-22 150.4 26.7 203 117-358 36-238 (252)
64 4gyw_A UDP-N-acetylglucosamine 99.8 4.6E-19 1.6E-23 178.0 22.3 177 282-492 4-180 (723)
65 2ho1_A Type 4 fimbrial biogene 99.8 5.4E-18 1.8E-22 150.2 26.7 203 202-444 36-238 (252)
66 1xnf_A Lipoprotein NLPI; TPR, 99.8 6.7E-19 2.3E-23 158.2 20.9 253 130-438 17-269 (275)
67 3vtx_A MAMA; tetratricopeptide 99.8 1.8E-18 6.2E-23 145.2 21.7 166 245-444 5-170 (184)
68 2vq2_A PILW, putative fimbrial 99.8 1.8E-17 6.2E-22 143.9 28.6 207 199-444 4-211 (225)
69 4gyw_A UDP-N-acetylglucosamine 99.8 7.8E-19 2.7E-23 176.4 22.3 175 198-406 4-178 (723)
70 2vq2_A PILW, putative fimbrial 99.8 1.2E-17 4.1E-22 145.0 26.4 207 241-486 4-211 (225)
71 3qky_A Outer membrane assembly 99.8 4.6E-18 1.6E-22 151.5 22.8 209 242-477 12-252 (261)
72 3qky_A Outer membrane assembly 99.8 5.9E-18 2E-22 150.8 22.7 210 158-393 11-252 (261)
73 3n71_A Histone lysine methyltr 99.8 1.1E-17 3.6E-22 160.0 21.3 153 333-487 313-465 (490)
74 3n71_A Histone lysine methyltr 99.8 1.1E-17 3.6E-22 160.0 21.0 153 208-360 314-466 (490)
75 4i17_A Hypothetical protein; T 99.8 1.3E-16 4.3E-21 139.0 24.7 184 246-467 8-224 (228)
76 3e4b_A ALGK; tetratricopeptide 99.8 9.2E-18 3.1E-22 161.5 16.3 254 123-443 8-279 (452)
77 4i17_A Hypothetical protein; T 99.7 1.5E-16 5E-21 138.6 21.1 170 162-358 7-209 (228)
78 3gw4_A Uncharacterized protein 99.7 5E-16 1.7E-20 132.4 22.3 178 298-490 3-180 (203)
79 3e4b_A ALGK; tetratricopeptide 99.7 1.5E-16 5.2E-21 153.0 20.8 287 121-485 72-386 (452)
80 3u3w_A Transcriptional activat 99.7 5.6E-16 1.9E-20 140.4 23.4 193 117-320 74-270 (293)
81 2qfc_A PLCR protein; TPR, HTH, 99.7 1E-15 3.4E-20 138.7 25.0 195 117-320 74-270 (293)
82 2qfc_A PLCR protein; TPR, HTH, 99.7 4.9E-16 1.7E-20 140.7 22.9 195 202-406 74-270 (293)
83 3gw4_A Uncharacterized protein 99.7 6.6E-16 2.3E-20 131.7 22.1 195 128-338 2-196 (203)
84 2ooe_A Cleavage stimulation fa 99.7 6.6E-15 2.3E-19 145.2 31.5 309 121-485 16-453 (530)
85 4b4t_Q 26S proteasome regulato 99.7 3.6E-15 1.2E-19 143.4 28.9 238 165-411 7-254 (434)
86 2ooe_A Cleavage stimulation fa 99.7 3.5E-15 1.2E-19 147.2 29.3 213 245-494 272-500 (530)
87 3u3w_A Transcriptional activat 99.7 1E-15 3.5E-20 138.7 22.5 194 160-362 73-270 (293)
88 2ond_A Cleavage stimulation fa 99.7 1E-15 3.5E-20 139.6 22.5 224 135-403 33-271 (308)
89 2ond_A Cleavage stimulation fa 99.7 4.6E-15 1.6E-19 135.4 25.7 225 220-489 33-273 (308)
90 4b4t_Q 26S proteasome regulato 99.7 5.2E-15 1.8E-19 142.3 26.9 239 206-453 7-254 (434)
91 2yhc_A BAMD, UPF0169 lipoprote 99.7 9E-15 3.1E-19 126.7 23.2 177 245-443 4-212 (225)
92 3as5_A MAMA; tetratricopeptide 99.7 3.4E-15 1.2E-19 125.0 19.7 173 158-361 4-176 (186)
93 3as5_A MAMA; tetratricopeptide 99.7 4E-15 1.4E-19 124.6 19.6 171 284-488 5-175 (186)
94 2yhc_A BAMD, UPF0169 lipoprote 99.7 1.5E-14 5.1E-19 125.3 23.6 176 204-401 5-212 (225)
95 1xi4_A Clathrin heavy chain; a 99.7 1.2E-14 4.3E-19 149.2 26.0 253 125-485 1056-1308(1630)
96 3qww_A SET and MYND domain-con 99.7 1.3E-15 4.4E-20 143.2 17.2 116 385-500 310-425 (433)
97 2pzi_A Probable serine/threoni 99.7 7.6E-16 2.6E-20 155.7 16.2 200 129-362 402-602 (681)
98 2pzi_A Probable serine/threoni 99.7 1.1E-15 3.8E-20 154.5 17.0 199 173-406 402-602 (681)
99 4ga2_A E3 SUMO-protein ligase 99.7 7.6E-16 2.6E-20 123.9 12.3 147 167-344 2-149 (150)
100 3ro3_A PINS homolog, G-protein 99.7 1.4E-14 4.9E-19 118.3 20.3 157 241-405 5-161 (164)
101 3ro3_A PINS homolog, G-protein 99.7 1E-14 3.6E-19 119.1 19.1 157 325-489 5-161 (164)
102 3qww_A SET and MYND domain-con 99.7 4.6E-15 1.6E-19 139.5 18.8 123 214-336 309-431 (433)
103 4ga2_A E3 SUMO-protein ligase 99.6 1.1E-15 3.8E-20 122.9 11.9 147 208-388 2-149 (150)
104 3urz_A Uncharacterized protein 99.6 2.6E-14 8.9E-19 122.1 21.2 165 162-358 4-186 (208)
105 3urz_A Uncharacterized protein 99.6 1.9E-14 6.6E-19 122.9 20.0 165 118-316 4-186 (208)
106 1xi4_A Clathrin heavy chain; a 99.6 2E-13 6.8E-18 140.4 27.6 295 126-483 1070-1381(1630)
107 3qwp_A SET and MYND domain-con 99.6 1E-14 3.4E-19 137.6 16.8 133 336-470 294-426 (429)
108 3qwp_A SET and MYND domain-con 99.6 1.1E-14 3.7E-19 137.4 16.9 132 210-341 294-425 (429)
109 1b89_A Protein (clathrin heavy 99.6 1.5E-15 5.1E-20 139.9 7.9 273 120-483 34-308 (449)
110 4gco_A Protein STI-1; structur 99.6 9E-14 3.1E-18 107.8 15.2 117 198-338 8-124 (126)
111 4gco_A Protein STI-1; structur 99.6 1.4E-13 4.9E-18 106.7 15.3 116 241-382 9-124 (126)
112 3dra_A Protein farnesyltransfe 99.6 1.2E-12 4.1E-17 117.0 23.2 252 117-423 31-301 (306)
113 1b89_A Protein (clathrin heavy 99.6 7.3E-15 2.5E-19 135.3 9.0 258 129-487 14-273 (449)
114 3rjv_A Putative SEL1 repeat pr 99.5 1.8E-13 6.1E-18 117.2 16.7 176 135-358 3-197 (212)
115 3qou_A Protein YBBN; thioredox 99.5 3E-13 1E-17 121.7 18.7 165 119-316 118-284 (287)
116 3rjv_A Putative SEL1 repeat pr 99.5 4E-13 1.4E-17 114.9 18.5 177 220-444 3-197 (212)
117 3qou_A Protein YBBN; thioredox 99.5 2.9E-13 1E-17 121.7 18.2 169 284-486 114-284 (287)
118 2r5s_A Uncharacterized protein 99.5 1E-13 3.6E-18 114.9 13.7 162 121-316 9-173 (176)
119 2r5s_A Uncharacterized protein 99.5 1.3E-13 4.4E-18 114.3 13.8 165 287-486 6-173 (176)
120 3dra_A Protein farnesyltransfe 99.5 9.1E-12 3.1E-16 111.3 25.6 239 173-464 43-300 (306)
121 4f3v_A ESX-1 secretion system 99.5 1.7E-13 5.7E-18 119.4 13.8 207 206-444 10-237 (282)
122 4f3v_A ESX-1 secretion system 99.5 7.5E-13 2.6E-17 115.3 17.7 211 115-358 4-237 (282)
123 4gcn_A Protein STI-1; structur 99.5 1.2E-12 4.1E-17 101.7 16.6 108 242-358 5-112 (127)
124 2vsy_A XCC0866; transferase, g 99.5 3.5E-13 1.2E-17 134.0 16.7 153 131-316 2-157 (568)
125 3gyz_A Chaperone protein IPGC; 99.5 2.1E-13 7.2E-18 108.9 11.9 102 241-358 32-133 (151)
126 2vsy_A XCC0866; transferase, g 99.5 1.1E-12 3.7E-17 130.5 18.8 153 258-444 2-157 (568)
127 4gcn_A Protein STI-1; structur 99.5 2E-12 6.8E-17 100.4 15.8 108 284-402 5-112 (127)
128 1p5q_A FKBP52, FK506-binding p 99.5 2.5E-13 8.4E-18 125.1 12.0 162 130-317 125-295 (336)
129 3gyz_A Chaperone protein IPGC; 99.5 3.4E-12 1.2E-16 101.8 16.8 104 197-316 30-133 (151)
130 1p5q_A FKBP52, FK506-binding p 99.4 4.5E-13 1.5E-17 123.3 12.1 164 174-360 125-296 (336)
131 2fo7_A Synthetic consensus TPR 99.4 2E-11 6.8E-16 95.8 17.7 130 205-358 3-132 (136)
132 3dss_A Geranylgeranyl transfer 99.4 3E-10 1E-14 102.0 27.1 235 117-402 28-304 (331)
133 2fo7_A Synthetic consensus TPR 99.4 2.2E-11 7.5E-16 95.5 17.4 131 163-316 2-132 (136)
134 2vgx_A Chaperone SYCD; alterna 99.4 3.4E-12 1.2E-16 102.0 12.4 103 158-275 17-119 (148)
135 2vgx_A Chaperone SYCD; alterna 99.4 9.3E-12 3.2E-16 99.5 14.7 103 199-317 17-119 (148)
136 1a17_A Serine/threonine protei 99.4 3.9E-11 1.3E-15 98.1 18.7 140 243-406 11-150 (166)
137 1a17_A Serine/threonine protei 99.4 3.4E-11 1.2E-15 98.5 17.1 139 159-320 10-150 (166)
138 3upv_A Heat shock protein STI1 99.4 5.8E-11 2E-15 92.1 17.5 122 201-340 2-123 (126)
139 3upv_A Heat shock protein STI1 99.4 3.7E-11 1.2E-15 93.3 16.3 103 243-361 2-104 (126)
140 2hr2_A Hypothetical protein; a 99.4 4.1E-11 1.4E-15 94.2 15.7 118 244-362 10-135 (159)
141 2hr2_A Hypothetical protein; a 99.3 3E-11 1E-15 94.9 14.9 119 373-492 11-137 (159)
142 2fbn_A 70 kDa peptidylprolyl i 99.3 2.9E-12 9.8E-17 108.5 9.8 167 291-485 8-185 (198)
143 1hh8_A P67PHOX, NCF-2, neutrop 99.3 2.2E-11 7.5E-16 104.3 15.4 139 245-402 6-150 (213)
144 2c2l_A CHIP, carboxy terminus 99.3 2.4E-12 8.1E-17 115.4 9.2 194 245-485 4-198 (281)
145 1hh8_A P67PHOX, NCF-2, neutrop 99.3 1.3E-11 4.6E-16 105.7 13.6 136 204-358 7-150 (213)
146 2fbn_A 70 kDa peptidylprolyl i 99.3 3E-12 1E-16 108.4 8.8 159 166-349 8-176 (198)
147 2lni_A Stress-induced-phosphop 99.3 6.3E-11 2.2E-15 92.7 15.3 125 155-302 9-133 (133)
148 1kt0_A FKBP51, 51 kDa FK506-bi 99.3 5.6E-12 1.9E-16 121.2 9.3 154 130-309 246-407 (457)
149 2lni_A Stress-induced-phosphop 99.3 8.1E-11 2.8E-15 92.1 14.1 124 197-344 10-133 (133)
150 2vyi_A SGTA protein; chaperone 99.3 1.1E-10 3.9E-15 90.8 14.8 123 158-303 8-130 (131)
151 2vyi_A SGTA protein; chaperone 99.3 1.8E-10 6.2E-15 89.7 15.7 123 241-389 8-130 (131)
152 2xcb_A PCRH, regulatory protei 99.3 2.4E-11 8.4E-16 96.5 10.7 104 158-276 14-117 (142)
153 1kt0_A FKBP51, 51 kDa FK506-bi 99.3 1.3E-11 4.3E-16 118.7 10.6 160 174-356 246-413 (457)
154 2e2e_A Formate-dependent nitri 99.3 6.5E-11 2.2E-15 98.0 13.4 122 128-274 20-144 (177)
155 2c2l_A CHIP, carboxy terminus 99.3 1.4E-11 4.8E-16 110.3 9.8 194 203-443 4-198 (281)
156 3sz7_A HSC70 cochaperone (SGT) 99.3 1.7E-10 5.7E-15 94.2 15.4 104 240-359 6-109 (164)
157 2xcb_A PCRH, regulatory protei 99.3 2.5E-10 8.4E-15 90.6 16.0 104 241-360 14-117 (142)
158 2e2e_A Formate-dependent nitri 99.3 5.2E-11 1.8E-15 98.7 12.5 122 213-358 20-144 (177)
159 3rkv_A Putative peptidylprolyl 99.3 1.2E-10 4.2E-15 94.8 14.5 109 200-316 8-126 (162)
160 3sz7_A HSC70 cochaperone (SGT) 99.3 1.3E-10 4.6E-15 94.8 14.7 105 156-275 5-109 (164)
161 1wao_1 Serine/threonine protei 99.3 2.8E-12 9.6E-17 123.7 5.3 179 285-489 4-200 (477)
162 1wao_1 Serine/threonine protei 99.3 3.2E-12 1.1E-16 123.3 5.6 179 243-447 4-200 (477)
163 3rkv_A Putative peptidylprolyl 99.3 2E-10 7E-15 93.4 15.5 127 158-300 7-145 (162)
164 3dss_A Geranylgeranyl transfer 99.2 1.7E-08 5.8E-13 90.7 28.6 235 173-464 40-316 (331)
165 3q7a_A Farnesyltransferase alp 99.2 4.4E-09 1.5E-13 94.8 24.7 255 161-463 53-343 (349)
166 3q7a_A Farnesyltransferase alp 99.2 2.1E-09 7.2E-14 96.9 22.0 244 200-485 51-330 (349)
167 2xev_A YBGF; tetratricopeptide 99.2 9.2E-10 3.2E-14 85.5 16.7 102 247-358 4-105 (129)
168 3mv2_B Coatomer subunit epsilo 99.2 5.6E-09 1.9E-13 92.2 22.0 256 171-497 22-288 (310)
169 2xev_A YBGF; tetratricopeptide 99.2 1.5E-09 5E-14 84.4 16.4 102 331-444 4-105 (129)
170 3mv2_B Coatomer subunit epsilo 99.2 6.2E-09 2.1E-13 92.0 21.7 269 124-458 19-291 (310)
171 1na0_A Designed protein CTPR3; 99.2 1.4E-09 4.7E-14 83.8 15.9 118 244-387 8-125 (125)
172 3q49_B STIP1 homology and U bo 99.2 6.1E-10 2.1E-14 87.6 14.0 104 242-361 6-109 (137)
173 1na0_A Designed protein CTPR3; 99.2 1.2E-09 4E-14 84.2 15.2 119 160-301 7-125 (125)
174 1elr_A TPR2A-domain of HOP; HO 99.2 1.4E-09 4.8E-14 84.6 15.6 106 244-358 3-108 (131)
175 3q49_B STIP1 homology and U bo 99.2 1.5E-09 5E-14 85.4 15.6 102 202-319 8-109 (137)
176 1elr_A TPR2A-domain of HOP; HO 99.2 1.1E-09 3.9E-14 85.1 14.8 123 160-299 2-124 (131)
177 1hxi_A PEX5, peroxisome target 99.1 3.7E-10 1.3E-14 86.6 11.2 97 375-487 19-115 (121)
178 1ihg_A Cyclophilin 40; ppiase 99.1 8.8E-10 3E-14 102.4 15.3 133 202-350 222-362 (370)
179 1ihg_A Cyclophilin 40; ppiase 99.1 1.2E-09 4E-14 101.6 15.5 133 161-309 222-363 (370)
180 1hxi_A PEX5, peroxisome target 99.1 5.8E-10 2E-14 85.5 11.1 96 121-233 20-115 (121)
181 2dba_A Smooth muscle cell asso 99.1 1.6E-09 5.6E-14 86.4 13.6 119 326-467 25-143 (148)
182 1elw_A TPR1-domain of HOP; HOP 99.1 3.3E-09 1.1E-13 80.6 14.5 112 203-338 4-115 (118)
183 1elw_A TPR1-domain of HOP; HOP 99.1 2.5E-09 8.6E-14 81.3 13.8 114 161-297 3-116 (118)
184 2dba_A Smooth muscle cell asso 99.1 3E-09 1E-13 84.8 14.1 120 158-297 24-143 (148)
185 4e6h_A MRNA 3'-END-processing 99.1 1.7E-07 5.8E-12 93.3 28.9 230 220-487 326-571 (679)
186 2if4_A ATFKBP42; FKBP-like, al 99.0 6.3E-10 2.1E-14 102.3 10.3 144 200-359 176-329 (338)
187 2if4_A ATFKBP42; FKBP-like, al 99.0 6.7E-10 2.3E-14 102.1 10.2 143 159-317 176-329 (338)
188 1dce_A Protein (RAB geranylger 99.0 6.5E-09 2.2E-13 102.0 17.2 189 118-347 28-244 (567)
189 3k9i_A BH0479 protein; putativ 99.0 3.3E-09 1.1E-13 80.8 10.2 90 174-275 2-91 (117)
190 2kck_A TPR repeat; tetratricop 99.0 1.4E-09 4.9E-14 81.9 8.1 98 245-358 6-106 (112)
191 1dce_A Protein (RAB geranylger 99.0 2.5E-08 8.4E-13 97.9 18.3 174 260-475 44-244 (567)
192 4e6h_A MRNA 3'-END-processing 99.0 1.4E-07 4.9E-12 93.8 23.7 229 136-403 327-571 (679)
193 2kck_A TPR repeat; tetratricop 98.9 1.8E-09 6.3E-14 81.2 7.4 97 204-316 7-106 (112)
194 3k9i_A BH0479 protein; putativ 98.9 2.6E-09 8.8E-14 81.4 8.0 90 130-233 2-91 (117)
195 1zu2_A Mitochondrial import re 98.9 7.6E-09 2.6E-13 81.1 9.1 86 130-232 14-120 (158)
196 1zu2_A Mitochondrial import re 98.8 1.2E-08 4.2E-13 79.9 8.0 86 257-358 14-120 (158)
197 1na3_A Designed protein CTPR2; 98.8 9.5E-08 3.3E-12 68.6 11.2 86 242-343 6-91 (91)
198 1na3_A Designed protein CTPR2; 98.8 1.3E-07 4.6E-12 67.8 11.6 86 200-301 6-91 (91)
199 2l6j_A TPR repeat-containing p 98.7 9.6E-09 3.3E-13 77.2 5.1 93 203-311 4-102 (111)
200 2l6j_A TPR repeat-containing p 98.7 1.3E-08 4.5E-13 76.4 5.7 96 373-481 4-102 (111)
201 2kat_A Uncharacterized protein 98.7 7.9E-08 2.7E-12 72.7 9.3 84 135-235 2-85 (115)
202 1klx_A Cysteine rich protein B 98.7 3.9E-07 1.3E-11 71.3 13.4 111 216-358 8-126 (138)
203 2kat_A Uncharacterized protein 98.7 1.8E-07 6.1E-12 70.7 10.2 84 390-489 2-85 (115)
204 1klx_A Cysteine rich protein B 98.7 3.9E-07 1.3E-11 71.3 12.3 110 343-486 9-126 (138)
205 3ma5_A Tetratricopeptide repea 98.6 2E-07 6.8E-12 68.4 9.5 72 411-490 3-74 (100)
206 4g26_A Pentatricopeptide repea 98.6 3.7E-06 1.3E-10 81.2 20.4 167 247-443 28-203 (501)
207 4g26_A Pentatricopeptide repea 98.6 3.3E-06 1.1E-10 81.4 20.1 167 289-485 28-203 (501)
208 3ma5_A Tetratricopeptide repea 98.6 6.2E-07 2.1E-11 65.7 11.5 71 242-320 4-74 (100)
209 2uy1_A Cleavage stimulation fa 98.6 0.00013 4.6E-09 70.3 30.7 303 120-488 16-415 (493)
210 3txn_A 26S proteasome regulato 98.4 0.00015 5E-09 66.5 24.4 212 204-430 20-235 (394)
211 3txn_A 26S proteasome regulato 98.4 0.00022 7.5E-09 65.4 23.8 188 246-446 20-212 (394)
212 2kc7_A BFR218_protein; tetratr 98.3 1.9E-06 6.6E-11 62.8 8.3 87 377-487 4-91 (99)
213 2kc7_A BFR218_protein; tetratr 98.3 2E-06 6.9E-11 62.7 8.0 87 122-233 4-91 (99)
214 2uy1_A Cleavage stimulation fa 98.3 0.00015 5.2E-09 69.9 22.8 284 130-483 6-380 (493)
215 2v5f_A Prolyl 4-hydroxylase su 98.2 2.1E-05 7.3E-10 57.7 11.8 80 206-294 8-87 (104)
216 2v5f_A Prolyl 4-hydroxylase su 98.2 5.1E-05 1.8E-09 55.7 13.0 71 162-232 5-75 (104)
217 3ly7_A Transcriptional activat 98.2 5.1E-05 1.7E-09 68.4 14.7 134 121-274 199-339 (372)
218 3u64_A Protein TP_0956; tetrat 98.2 0.00034 1.2E-08 60.3 19.0 101 242-358 149-269 (301)
219 3ly7_A Transcriptional activat 98.0 0.00019 6.4E-09 64.7 16.1 137 162-316 196-339 (372)
220 3ffl_A Anaphase-promoting comp 98.0 0.00027 9.1E-09 55.0 13.4 108 121-229 23-148 (167)
221 3u64_A Protein TP_0956; tetrat 98.0 0.0033 1.1E-07 54.3 21.4 85 218-316 178-269 (301)
222 3ffl_A Anaphase-promoting comp 98.0 0.00033 1.1E-08 54.5 13.8 128 330-467 21-165 (167)
223 3bee_A Putative YFRE protein; 97.9 0.00014 4.6E-09 51.9 10.4 67 284-358 3-72 (93)
224 4b4t_P 26S proteasome regulato 97.9 0.011 3.8E-07 55.8 25.8 231 116-361 15-250 (445)
225 1pc2_A Mitochondria fission pr 97.8 0.0011 3.6E-08 51.4 14.7 68 284-358 29-100 (152)
226 3bee_A Putative YFRE protein; 97.8 0.00018 6.2E-09 51.2 9.7 66 243-316 4-72 (93)
227 1pc2_A Mitochondria fission pr 97.8 0.001 3.5E-08 51.4 13.9 84 218-316 13-100 (152)
228 4b4t_P 26S proteasome regulato 97.6 0.034 1.2E-06 52.5 23.9 218 175-406 29-251 (445)
229 4h7y_A Dual specificity protei 97.1 0.011 3.7E-07 45.0 12.0 103 375-486 15-123 (161)
230 1nzn_A CGI-135 protein, fissio 96.8 0.087 3E-06 39.1 14.1 67 285-358 33-103 (126)
231 4h7y_A Dual specificity protei 96.7 0.03 1E-06 42.7 11.4 104 246-358 14-123 (161)
232 4b4t_R RPN7, 26S proteasome re 96.4 0.065 2.2E-06 50.4 14.3 110 284-402 128-237 (429)
233 3spa_A Mtrpol, DNA-directed RN 96.4 0.044 1.5E-06 56.1 13.3 105 201-316 125-230 (1134)
234 1nzn_A CGI-135 protein, fissio 96.3 0.22 7.5E-06 37.0 14.8 69 158-232 31-103 (126)
235 3spa_A Mtrpol, DNA-directed RN 96.3 0.056 1.9E-06 55.4 13.5 106 369-485 123-229 (1134)
236 3mkq_A Coatomer beta'-subunit; 96.2 0.12 4.2E-06 53.3 16.6 75 207-313 633-707 (814)
237 3mkq_A Coatomer beta'-subunit; 96.0 0.24 8.2E-06 51.0 17.6 46 172-229 662-707 (814)
238 4b4t_R RPN7, 26S proteasome re 96.0 0.069 2.4E-06 50.2 12.2 104 121-232 134-237 (429)
239 3lpz_A GET4 (YOR164C homolog); 95.9 0.86 2.9E-05 40.5 31.5 157 265-428 115-295 (336)
240 2ff4_A Probable regulatory pro 95.7 0.19 6.5E-06 46.5 13.7 105 383-495 125-243 (388)
241 4gns_B Protein CSD3, chitin bi 95.2 0.86 2.9E-05 45.7 17.0 123 175-313 261-397 (754)
242 2ff4_A Probable regulatory pro 95.1 0.72 2.5E-05 42.6 15.5 118 116-240 113-242 (388)
243 1y8m_A FIS1; mitochondria, unk 95.1 0.63 2.2E-05 35.2 12.0 68 159-232 36-106 (144)
244 4gns_B Protein CSD3, chitin bi 94.5 0.88 3E-05 45.6 15.1 123 342-483 261-397 (754)
245 3o48_A Mitochondria fission 1 94.4 0.63 2.2E-05 34.7 10.4 69 158-232 36-107 (134)
246 2wpv_A GET4, UPF0363 protein Y 94.0 3 0.0001 36.7 21.3 181 300-488 26-219 (312)
247 3o48_A Mitochondria fission 1 93.8 1.2 4.1E-05 33.2 10.9 66 286-358 39-107 (134)
248 4b4t_S RPN3, 26S proteasome re 93.7 0.75 2.6E-05 43.5 11.9 145 212-359 145-300 (523)
249 4ady_A RPN2, 26S proteasome re 93.6 7.4 0.00025 40.0 21.0 199 174-400 386-587 (963)
250 3mkq_B Coatomer subunit alpha; 93.6 0.98 3.3E-05 35.8 10.7 101 172-313 15-115 (177)
251 3mkq_B Coatomer subunit alpha; 93.4 1 3.6E-05 35.7 10.7 101 297-441 15-115 (177)
252 4b4t_S RPN3, 26S proteasome re 93.0 3.3 0.00011 39.2 15.1 144 254-402 145-299 (523)
253 3kae_A CDC27, possible protein 92.6 2.9 9.9E-05 32.6 13.0 97 249-358 37-143 (242)
254 1ya0_A SMG-7 transcript varian 92.6 1 3.5E-05 42.8 11.4 63 245-315 152-214 (497)
255 2wpv_A GET4, UPF0363 protein Y 92.4 5.4 0.00019 35.1 29.6 145 118-269 13-158 (312)
256 1y8m_A FIS1; mitochondria, unk 91.6 3.5 0.00012 31.2 14.8 68 284-358 36-106 (144)
257 4fhn_B Nucleoporin NUP120; pro 91.1 10 0.00035 40.6 18.4 105 287-397 842-962 (1139)
258 3lpz_A GET4 (YOR164C homolog); 90.2 9.6 0.00033 33.8 30.5 215 247-472 57-297 (336)
259 4b4t_O 26S proteasome regulato 89.8 12 0.00041 34.4 15.8 133 136-275 57-199 (393)
260 1ya0_A SMG-7 transcript varian 89.7 2.2 7.5E-05 40.6 10.5 62 416-485 153-214 (497)
261 4b4t_O 26S proteasome regulato 88.2 14 0.00049 33.8 14.7 108 380-487 83-199 (393)
262 2npm_A 14-3-3 domain containin 87.1 13 0.00045 31.5 16.9 58 431-489 172-230 (260)
263 4fhn_B Nucleoporin NUP120; pro 87.0 5.4 0.00018 42.8 12.6 104 332-439 845-962 (1139)
264 1zbp_A Hypothetical protein VP 87.0 9.4 0.00032 32.5 11.4 124 126-275 5-130 (273)
265 2crb_A Nuclear receptor bindin 86.0 3.6 0.00012 28.0 6.6 46 457-502 15-60 (97)
266 3ubw_A 14-3-3E, 14-3-3 protein 85.2 16 0.00056 30.8 20.3 59 431-489 172-231 (261)
267 1o9d_A 14-3-3-like protein C; 84.8 17 0.00059 30.8 19.7 182 121-316 11-207 (260)
268 2o8p_A 14-3-3 domain containin 84.7 16 0.00054 30.2 21.1 181 292-487 11-198 (227)
269 1o9d_A 14-3-3-like protein C; 84.6 18 0.0006 30.7 20.5 56 432-487 152-208 (260)
270 2w2u_A Hypothetical P60 katani 84.4 7.4 0.00025 26.3 8.3 38 115-152 16-53 (83)
271 4a5x_A MITD1, MIT domain-conta 83.3 8.6 0.00029 26.2 8.5 37 117-153 15-51 (86)
272 2cpt_A SKD1 protein, vacuolar 81.2 14 0.00046 27.0 9.5 56 117-172 17-72 (117)
273 2br9_A 14-3-3E, 14-3-3 protein 81.1 23 0.00078 29.5 19.7 182 121-318 8-204 (234)
274 2npm_A 14-3-3 domain containin 79.1 29 0.00098 29.4 18.7 184 119-317 29-228 (260)
275 3iqu_A 14-3-3 protein sigma; s 78.7 28 0.00094 29.0 19.8 59 431-489 149-208 (236)
276 3efz_A 14-3-3 protein; 14-3-3, 78.0 6.4 0.00022 33.4 7.0 56 431-486 168-226 (268)
277 3ubw_A 14-3-3E, 14-3-3 protein 76.9 33 0.0011 29.0 20.5 181 120-317 33-229 (261)
278 1wfd_A Hypothetical protein 15 76.8 16 0.00054 25.3 8.4 37 117-153 14-50 (93)
279 2br9_A 14-3-3E, 14-3-3 protein 76.4 32 0.0011 28.6 20.6 60 431-490 146-206 (234)
280 3uzd_A 14-3-3 protein gamma; s 75.8 35 0.0012 28.7 21.2 182 121-318 7-205 (248)
281 2rpa_A Katanin P60 ATPase-cont 75.0 16 0.00053 24.3 7.6 36 118-153 12-47 (78)
282 3uzd_A 14-3-3 protein gamma; s 74.9 37 0.0013 28.5 22.7 58 389-446 147-205 (248)
283 2v6y_A AAA family ATPase, P60 73.5 18 0.00062 24.4 9.0 36 117-152 10-45 (83)
284 4ady_A RPN2, 26S proteasome re 71.9 97 0.0033 32.1 26.0 199 128-356 384-587 (963)
285 4aez_C MAD3, mitotic spindle c 71.7 41 0.0014 27.7 11.5 83 392-486 96-179 (223)
286 3esl_A Checkpoint serine/threo 71.2 40 0.0014 27.3 15.1 85 394-485 58-143 (202)
287 2crb_A Nuclear receptor bindin 70.5 14 0.00049 25.2 5.7 36 371-406 13-48 (97)
288 1qsa_A Protein (soluble lytic 70.5 85 0.0029 30.8 32.0 127 336-485 221-347 (618)
289 2o8p_A 14-3-3 domain containin 69.3 47 0.0016 27.4 21.8 181 123-317 11-198 (227)
290 4a5x_A MITD1, MIT domain-conta 69.1 15 0.00051 25.0 5.9 34 461-494 20-53 (86)
291 2wvi_A Mitotic checkpoint seri 69.0 29 0.00099 27.0 8.2 81 393-485 43-124 (164)
292 1zbp_A Hypothetical protein VP 65.4 64 0.0022 27.5 11.9 123 296-445 6-130 (273)
293 3re2_A Predicted protein; meni 65.0 76 0.0026 28.2 13.5 70 375-447 257-328 (472)
294 1wfd_A Hypothetical protein 15 65.0 20 0.00067 24.8 6.0 34 461-494 19-52 (93)
295 2wvi_A Mitotic checkpoint seri 64.3 46 0.0016 25.9 8.5 82 349-443 43-124 (164)
296 2v6x_A Vacuolar protein sortin 62.4 33 0.0011 23.1 8.8 36 117-152 12-47 (85)
297 4a1g_A Mitotic checkpoint seri 62.0 46 0.0016 25.5 8.0 81 393-485 48-129 (152)
298 3re2_A Predicted protein; meni 61.8 88 0.003 27.9 13.7 74 286-362 254-329 (472)
299 2v6x_A Vacuolar protein sortin 61.0 19 0.00064 24.3 5.3 30 463-492 19-48 (85)
300 2rpa_A Katanin P60 ATPase-cont 60.4 19 0.00065 23.9 4.9 44 460-504 15-58 (78)
301 2vkj_A TM1634; membrane protei 59.6 37 0.0013 22.9 7.6 32 116-147 51-82 (106)
302 4gq4_A Menin; tumor suppressor 58.4 1.1E+02 0.0038 27.9 13.7 73 287-362 262-336 (489)
303 3iqu_A 14-3-3 protein sigma; s 58.1 81 0.0028 26.3 22.5 183 248-446 11-207 (236)
304 1wy6_A Hypothetical protein ST 57.7 47 0.0016 25.0 7.0 55 126-190 99-153 (172)
305 4aez_C MAD3, mitotic spindle c 57.4 53 0.0018 27.1 8.1 83 349-444 97-179 (223)
306 2w2u_A Hypothetical P60 katani 56.5 42 0.0014 22.5 7.8 27 335-361 25-51 (83)
307 3u84_A Menin; MLL, JUND, ledgf 56.0 1.2E+02 0.0041 27.6 13.5 54 391-447 297-350 (550)
308 3t5v_B Nuclear mRNA export pro 55.3 72 0.0025 29.8 9.8 70 165-234 179-252 (455)
309 1wy6_A Hypothetical protein ST 54.2 55 0.0019 24.7 6.8 53 425-485 101-153 (172)
310 4gq4_A Menin; tumor suppressor 54.1 1.3E+02 0.0045 27.4 13.3 70 375-447 264-335 (489)
311 3t5v_B Nuclear mRNA export pro 52.9 35 0.0012 31.9 7.3 69 375-444 178-249 (455)
312 4gq2_M Nucleoporin NUP120; bet 52.1 54 0.0018 34.3 9.3 71 162-232 840-926 (950)
313 2v6y_A AAA family ATPase, P60 51.2 52 0.0018 22.0 7.9 26 336-361 18-43 (83)
314 2cpt_A SKD1 protein, vacuolar 48.7 74 0.0025 23.0 8.0 28 422-449 25-52 (117)
315 3u84_A Menin; MLL, JUND, ledgf 47.0 1.7E+02 0.0058 26.7 14.4 73 287-362 277-351 (550)
316 3ax2_A Mitochondrial import re 46.4 18 0.00062 23.6 3.0 27 461-487 21-47 (73)
317 3kae_A CDC27, possible protein 46.3 1.1E+02 0.0036 24.1 22.8 125 125-274 9-143 (242)
318 3ax2_A Mitochondrial import re 45.9 58 0.002 21.2 5.3 28 332-359 20-47 (73)
319 4gq2_M Nucleoporin NUP120; bet 45.3 1.2E+02 0.004 31.8 10.6 71 122-192 844-927 (950)
320 2cwy_A Hypothetical protein TT 44.7 52 0.0018 22.7 5.4 65 123-197 6-74 (94)
321 1om2_A Protein (mitochondrial 44.4 31 0.0011 23.9 4.0 27 461-487 24-50 (95)
322 2ijq_A Hypothetical protein; s 44.3 77 0.0026 24.5 6.8 68 166-236 36-108 (161)
323 1zb1_A BRO1 protein; AIP1, BRO 43.8 1.9E+02 0.0065 26.3 10.9 33 459-491 259-291 (392)
324 1qsa_A Protein (soluble lytic 43.7 2.4E+02 0.0083 27.6 19.1 170 167-356 219-408 (618)
325 2vkj_A TM1634; membrane protei 41.8 78 0.0027 21.3 6.8 48 160-212 51-99 (106)
326 2wb7_A PT26-6P; extra chromoso 41.1 1.7E+02 0.006 27.3 9.5 40 390-429 449-488 (526)
327 2wb7_A PT26-6P; extra chromoso 38.0 2.6E+02 0.0088 26.2 10.7 68 262-358 449-516 (526)
328 3t5x_A PCI domain-containing p 37.5 76 0.0026 25.7 6.2 59 200-261 11-69 (203)
329 2wm9_A Dedicator of cytokinesi 35.0 1.8E+02 0.0061 26.9 9.0 33 369-401 7-39 (428)
330 2cwy_A Hypothetical protein TT 33.9 94 0.0032 21.4 5.3 64 168-236 7-72 (94)
331 3myv_A SUSD superfamily protei 33.4 69 0.0024 30.0 6.1 35 283-317 186-220 (454)
332 2ijq_A Hypothetical protein; s 32.7 1.7E+02 0.0059 22.6 9.8 69 121-196 35-109 (161)
333 1om2_A Protein (mitochondrial 31.8 65 0.0022 22.3 4.1 27 419-445 24-50 (95)
334 3t5x_A PCI domain-containing p 31.5 1.8E+02 0.006 23.5 7.5 35 159-193 11-45 (203)
335 3kez_A Putative sugar binding 30.7 76 0.0026 29.8 5.9 35 283-317 192-226 (461)
336 3myv_A SUSD superfamily protei 30.3 77 0.0026 29.6 5.9 34 411-444 186-219 (454)
337 3esl_A Checkpoint serine/threo 29.8 2.2E+02 0.0075 23.0 17.0 86 224-316 58-144 (202)
338 1zb1_A BRO1 protein; AIP1, BRO 29.5 3.2E+02 0.011 24.8 11.7 31 290-320 260-290 (392)
339 3kez_A Putative sugar binding 28.4 83 0.0028 29.5 5.8 35 410-444 191-225 (461)
340 2xze_A STAM-binding protein; h 26.6 1E+02 0.0035 23.4 4.9 41 415-456 40-80 (146)
341 3mkr_B Coatomer subunit alpha; 26.4 3.3E+02 0.011 23.9 11.0 31 118-148 102-132 (320)
342 2oo2_A Hypothetical protein AF 26.4 1.5E+02 0.0052 20.0 6.3 50 96-145 13-62 (86)
343 2xze_A STAM-binding protein; h 24.9 1E+02 0.0035 23.3 4.6 39 458-497 41-79 (146)
344 3mcx_A SUSD superfamily protei 23.7 88 0.003 29.5 5.0 34 283-316 198-231 (477)
345 4a1g_A Mitotic checkpoint seri 21.6 2.7E+02 0.0094 21.2 9.4 83 222-316 47-130 (152)
346 3mcx_A SUSD superfamily protei 21.4 96 0.0033 29.2 4.8 34 411-444 198-231 (477)
347 3snx_A SUSD homolog, putative 20.8 1.6E+02 0.0055 27.5 6.1 33 283-315 187-219 (460)
No 1
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.6e-30 Score=243.14 Aligned_cols=342 Identities=17% Similarity=0.192 Sum_probs=292.4
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCCh-hHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCC
Q 010446 119 LELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGI-EEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKD 197 (510)
Q Consensus 119 ~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 197 (510)
..++..|..+...|++++|+.+++++++. .+..+ ..+.++..+|.++...|++++|+.++++++.+.... .
T Consensus 10 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~-------~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-~ 81 (406)
T 3sf4_A 10 LELALEGERLCKSGDCRAGVSFFEAAVQV-------GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI-G 81 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-T
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhc-------CcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc-c
Confidence 34677899999999999999999999987 23233 346789999999999999999999999999988764 4
Q ss_pred CchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCC-----------------
Q 010446 198 DEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGR----------------- 260 (510)
Q Consensus 198 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~----------------- 260 (510)
+.+....++..+|.++...|++++|+.++++++++.... .+.+..+.++..+|.+|...|+
T Consensus 82 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a 159 (406)
T 3sf4_A 82 DQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEV 159 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHH
T ss_pred ccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc--ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhH
Confidence 557778889999999999999999999999999998775 3445678899999999999999
Q ss_pred ---HHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Q 010446 261 ---AKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAH 337 (510)
Q Consensus 261 ---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 337 (510)
+++|+.++++++++..... +.+....++.++|.++...|++++|+.++++++++.... ++.+....++.++|.
T Consensus 160 ~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~ 235 (406)
T 3sf4_A 160 RDALQAAVDFYEENLSLVTALG--DRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGN 235 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc--CcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHH
Confidence 9999999999999987753 456778899999999999999999999999999998775 344567779999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHH
Q 010446 338 AKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTH 417 (510)
Q Consensus 338 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 417 (510)
++...|++++|+.++++++.+.... .++.....++..+|.++...|++++|+.++++++.+..... +.+....+
T Consensus 236 ~~~~~g~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~--~~~~~~~~ 309 (406)
T 3sf4_A 236 AYIFLGEFETASEYYKKTLLLARQL----KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELN--DRIGEGRA 309 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHH
T ss_pred HHHHcCChHHHHHHHHHHHHHHHhC----cCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcC--CcHHHHHH
Confidence 9999999999999999999998763 45566678889999999999999999999999999887752 45666788
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHH
Q 010446 418 LLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLE 482 (510)
Q Consensus 418 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 482 (510)
+..+|.+|...|++++|+.++++++++.... .+.+....++..+|.++...|+...+...+.+
T Consensus 310 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~ 372 (406)
T 3sf4_A 310 CWSLGNAYTALGNHDQAMHFAEKHLEISREV--GDKSGELTARLNLSDLQMVLGLSYSTNNSIMS 372 (406)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHTTSCC------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--cCCcchhHHHHHHHHHHHHhhHhHHHHHHHHH
Confidence 9999999999999999999999999998775 34567788899999999999987544433333
No 2
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=100.00 E-value=5.4e-30 Score=243.37 Aligned_cols=301 Identities=18% Similarity=0.192 Sum_probs=265.4
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCC
Q 010446 119 LELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDD 198 (510)
Q Consensus 119 ~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 198 (510)
..+...+..+...|++++|+..|++++.. .|....++..+|.++...|++++|+..+++++...
T Consensus 68 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~----------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~------ 131 (388)
T 1w3b_A 68 EAYSNLGNVYKERGQLQEAIEHYRHALRL----------KPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYN------ 131 (388)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------CTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHc----------CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------
Confidence 34777889999999999999999999987 77888899999999999999999999999998764
Q ss_pred chHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHh
Q 010446 199 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELN 278 (510)
Q Consensus 199 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 278 (510)
|....++..+|.++...|++++|+..|+++++. .|....++..+|.++...|++++|+..+++++++
T Consensus 132 -p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~---- 198 (388)
T 1w3b_A 132 -PDLYCVRSDLGNLLKALGRLEEAKACYLKAIET--------QPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTL---- 198 (388)
T ss_dssp -TTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH----
T ss_pred -CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc----
Confidence 344455789999999999999999999999875 3555778999999999999999999999999987
Q ss_pred cCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 279 RGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 279 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
.|....++..+|.++...|++++|+..+++++.+ +|....++.++|.++...|++++|+..++++++.
T Consensus 199 ----~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 266 (388)
T 1w3b_A 199 ----DPNFLDAYINLGNVLKEARIFDRAVAAYLRALSL--------SPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL 266 (388)
T ss_dssp ----CTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred ----CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4666789999999999999999999999999985 3445678889999999999999999999999886
Q ss_pred HHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHH
Q 010446 359 IKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLL 438 (510)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 438 (510)
.|+.+ .++.++|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+..+
T Consensus 267 -------~p~~~---~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~ 328 (388)
T 1w3b_A 267 -------QPHFP---DAYCNLANALKEKGSVAEAEDCYNTALRL--------CPTHADSLNNLANIKREQGNIEEAVRLY 328 (388)
T ss_dssp -------CSSCH---HHHHHHHHHHHHHSCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred -------CCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CcccHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 34443 46789999999999999999999999886 2445678889999999999999999999
Q ss_pred HHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 010446 439 RICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYI 486 (510)
Q Consensus 439 ~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 486 (510)
++++++ .|....++..+|.++...|++++|+.+|++++++
T Consensus 329 ~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 368 (388)
T 1w3b_A 329 RKALEV--------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRI 368 (388)
T ss_dssp HHHTTS--------CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTT
T ss_pred HHHHhc--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 999873 5667788999999999999999999999999874
No 3
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.98 E-value=6.8e-29 Score=237.72 Aligned_cols=316 Identities=18% Similarity=0.198 Sum_probs=276.9
Q ss_pred ChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhc
Q 010446 158 GIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRY 237 (510)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 237 (510)
.+.....+..+|..+...|++++|+..+++++... ..+....+.++..+|.+|...|++++|+.++++++++....
T Consensus 44 ~~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~---~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~- 119 (411)
T 4a1s_A 44 GSSMCLELALEGERLCNAGDCRAGVAFFQAAIQAG---TEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSM- 119 (411)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---CSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT-
T ss_pred hhHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhc---ccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc-
Confidence 35667788899999999999999999999999874 33444456789999999999999999999999999998775
Q ss_pred CCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCC---------------
Q 010446 238 GKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGK--------------- 302 (510)
Q Consensus 238 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~--------------- 302 (510)
.+.+....++..+|.+|...|++++|+.++++++++..... +.+....++..+|.+|...|+
T Consensus 120 -~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~ 196 (411)
T 4a1s_A 120 -NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLG--DRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVK 196 (411)
T ss_dssp -TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHH
T ss_pred -cCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHcCcccccccchhhhhhhh
Confidence 44577889999999999999999999999999999987764 456778899999999999999
Q ss_pred --hHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHH
Q 010446 303 --AVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLA 380 (510)
Q Consensus 303 --~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la 380 (510)
+++|+.++++++++.+.. .+.+....++.++|.++...|++++|+.++++++++.... .+......++.++|
T Consensus 197 ~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~~la 270 (411)
T 4a1s_A 197 EALTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREF----GDRAAERRANSNLG 270 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH----TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhc----CCcHHHHHHHHHHH
Confidence 999999999999988776 3456678899999999999999999999999999998763 45556677889999
Q ss_pred HHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHH
Q 010446 381 ELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPM 460 (510)
Q Consensus 381 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 460 (510)
.++...|++++|+.++++++.+.... ........++..+|.+|...|++++|+.++++++.+.... .+.+....++
T Consensus 271 ~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~ 346 (411)
T 4a1s_A 271 NSHIFLGQFEDAAEHYKRTLALAVEL--GEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQEL--GDRIGEARAC 346 (411)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHH
T ss_pred HHHHHCcCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC--CChHHHHHHH
Confidence 99999999999999999999998765 2445567889999999999999999999999999988776 3456677889
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHh
Q 010446 461 LHLGITLYHLNRDKEAEKLVLEALYIREIA 490 (510)
Q Consensus 461 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 490 (510)
..+|.+|...|++++|..++++++++.++.
T Consensus 347 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 376 (411)
T 4a1s_A 347 WSLGNAHSAIGGHERALKYAEQHLQLAXXX 376 (411)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999987654
No 4
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.98 E-value=3.6e-29 Score=237.68 Aligned_cols=291 Identities=16% Similarity=0.143 Sum_probs=191.8
Q ss_pred HHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHH
Q 010446 129 IMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLH 208 (510)
Q Consensus 129 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (510)
...|++++|..++++++.. .|..+.++..+|.++...|++++|+..|++++.+. |....++..
T Consensus 44 ~~~~~~~~a~~~~~~a~~~----------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-------p~~~~~~~~ 106 (388)
T 1w3b_A 44 FQCRRLDRSAHFSTLAIKQ----------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLK-------PDFIDGYIN 106 (388)
T ss_dssp HHTTCHHHHHHHHHHHHHH----------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-------TTCHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhc----------CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHcC-------cchHHHHHH
Confidence 4455555555555555554 45555666666666666666666666666665542 223334566
Q ss_pred HHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHH
Q 010446 209 MGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVL 288 (510)
Q Consensus 209 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 288 (510)
+|.++...|++++|+..|+++++. .|....++..+|.++...|++++|+..++++++. .|....
T Consensus 107 l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~ 170 (388)
T 1w3b_A 107 LAAALVAAGDMEGAVQAYVSALQY--------NPDLYCVRSDLGNLLKALGRLEEAKACYLKAIET--------QPNFAV 170 (388)
T ss_dssp HHHHHHHHSCSSHHHHHHHHHHHH--------CTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHH--------CTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCCHH
Confidence 666666666666666666666553 1333455666677777777777777777766654 344566
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCC
Q 010446 289 PLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLD 368 (510)
Q Consensus 289 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 368 (510)
++..+|.++...|++++|+..|++++.+ +|....++.++|.++...|++++|+..+++++.. .|+
T Consensus 171 ~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-------~p~ 235 (388)
T 1w3b_A 171 AWSNLGCVFNAQGEIWLAIHHFEKAVTL--------DPNFLDAYINLGNVLKEARIFDRAVAAYLRALSL-------SPN 235 (388)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHH-------CTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-------CcC
Confidence 6677777777777777777777777664 2344456677777777777777777777777665 233
Q ss_pred ChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Q 010446 369 DSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKT 448 (510)
Q Consensus 369 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 448 (510)
+ ..++.++|.++...|++++|+..+++++.+ .|....++..+|.++...|++++|+..|++++++
T Consensus 236 ~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~---- 300 (388)
T 1w3b_A 236 H---AVVHGNLACVYYEQGLIDLAIDTYRRAIEL--------QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL---- 300 (388)
T ss_dssp C---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--------CSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH----
T ss_pred C---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh----
Confidence 3 335567788888888888888888777763 3444566777888888888888888888888774
Q ss_pred hCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 010446 449 VGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYI 486 (510)
Q Consensus 449 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 486 (510)
.|....++..+|.++...|++++|+.++++++++
T Consensus 301 ----~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 334 (388)
T 1w3b_A 301 ----CPTHADSLNNLANIKREQGNIEEAVRLYRKALEV 334 (388)
T ss_dssp ----CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTS
T ss_pred ----CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 3444566778888888888888888888887763
No 5
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.97 E-value=6.5e-29 Score=237.36 Aligned_cols=315 Identities=17% Similarity=0.198 Sum_probs=276.0
Q ss_pred hhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcC
Q 010446 159 IEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYG 238 (510)
Q Consensus 159 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 238 (510)
......+..+|.++...|++++|+..+++++... +.+.+....++..+|.++...|++++|+.++++++.+....
T Consensus 6 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~---~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-- 80 (406)
T 3sf4_A 6 EASCLELALEGERLCKSGDCRAGVSFFEAAVQVG---TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI-- 80 (406)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC---cccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc--
Confidence 3446678899999999999999999999999874 33444457789999999999999999999999999998775
Q ss_pred CCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCC----------------
Q 010446 239 KTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGK---------------- 302 (510)
Q Consensus 239 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~---------------- 302 (510)
.+.+..+.++..+|.++...|++++|+.++++++++..... +.+....++..+|.+|...|+
T Consensus 81 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~ 158 (406)
T 3sf4_A 81 GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN--DKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEE 158 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHH
T ss_pred cccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc--cccchHHHHHHHHHHHHHcCCcccccccchhhhhhhh
Confidence 45567789999999999999999999999999999988764 345567789999999999999
Q ss_pred ----hHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHH
Q 010446 303 ----AVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRID 378 (510)
Q Consensus 303 ----~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 378 (510)
+++|+.++++++.+.+.. .+.+....++.++|.++...|++++|+.++++++.+.... +++.....++.+
T Consensus 159 a~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~~ 232 (406)
T 3sf4_A 159 VRDALQAAVDFYEENLSLVTAL--GDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF----GDKAAERRAYSN 232 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc----CCcHHHHHHHHH
Confidence 999999999999998775 3456788899999999999999999999999999998873 556667778999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHH
Q 010446 379 LAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISF 458 (510)
Q Consensus 379 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 458 (510)
+|.++...|++++|+.++++++.+.... .+.+....++..+|.+|...|++++|+.++++++.+.... .+.+....
T Consensus 233 la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~~~~~ 308 (406)
T 3sf4_A 233 LGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL--NDRIGEGR 308 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHhC--cCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc--CCcHHHHH
Confidence 9999999999999999999999988765 2445567889999999999999999999999999987764 34566678
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHh
Q 010446 459 PMLHLGITLYHLNRDKEAEKLVLEALYIREIA 490 (510)
Q Consensus 459 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 490 (510)
++..+|.+|...|++++|..++++++++..+.
T Consensus 309 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 340 (406)
T 3sf4_A 309 ACWSLGNAYTALGNHDQAMHFAEKHLEISREV 340 (406)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999998775
No 6
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.97 E-value=3.9e-28 Score=225.50 Aligned_cols=311 Identities=17% Similarity=0.205 Sum_probs=269.1
Q ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCC
Q 010446 162 VAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTS 241 (510)
Q Consensus 162 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 241 (510)
...+...|..+...|++++|+..+++++... +.+......++..+|.++...|++++|+.++++++.+.... .+.
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~---~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~ 79 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVG---TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQ 79 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhC---cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcc--ccc
Confidence 4567788999999999999999999999874 33444456788999999999999999999999999998775 345
Q ss_pred hhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCC-------------------
Q 010446 242 ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGK------------------- 302 (510)
Q Consensus 242 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~------------------- 302 (510)
+....++..+|.++...|++++|+.++++++++.+... +.+....++..+|.++...|+
T Consensus 80 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 157 (338)
T 3ro2_A 80 LGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN--DKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRN 157 (338)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhc--CchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHH
Confidence 67788999999999999999999999999999987753 445567789999999999999
Q ss_pred -hHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHH
Q 010446 303 -AVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAE 381 (510)
Q Consensus 303 -~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~ 381 (510)
+++|+.++++++.+.+.. .+.+....++.++|.++...|++++|+.++++++.+.... +++.....++..+|.
T Consensus 158 ~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~----~~~~~~~~~~~~l~~ 231 (338)
T 3ro2_A 158 ALQAAVDLYEENLSLVTAL--GDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF----GDKAAERRAYSNLGN 231 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH----TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc----CChHHHHHHHHHHHH
Confidence 999999999999988776 2456678899999999999999999999999999998763 455666778899999
Q ss_pred HHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHH
Q 010446 382 LLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPML 461 (510)
Q Consensus 382 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 461 (510)
++...|++++|+.++++++.+.... .+.+....++..+|.+|...|++++|+.++++++.+.... .+.+....++.
T Consensus 232 ~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~ 307 (338)
T 3ro2_A 232 AYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL--KDRIGEGRACW 307 (338)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHhh--cchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc--CCcHHHHHHHH
Confidence 9999999999999999999988765 2455667889999999999999999999999999988765 33556677889
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 010446 462 HLGITLYHLNRDKEAEKLVLEALYIREI 489 (510)
Q Consensus 462 ~la~~~~~~g~~~~A~~~~~~al~~~~~ 489 (510)
.+|.+|...|++++|..++++++++.++
T Consensus 308 ~la~~~~~~g~~~~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 308 SLGNAYTALGNHDQAMHFAEKHLEISRE 335 (338)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998765
No 7
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.97 E-value=8.1e-28 Score=225.63 Aligned_cols=312 Identities=14% Similarity=0.064 Sum_probs=260.7
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCC
Q 010446 118 LLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKD 197 (510)
Q Consensus 118 ~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 197 (510)
...++..|..+...|++++|+..|+++++. .|..+.++..+|.++...|++++|+..+++++...
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~----------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~----- 67 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDG----------DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALK----- 67 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh----------CcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-----
Confidence 345788999999999999999999999987 77778899999999999999999999999998774
Q ss_pred CchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH------------HHHHhhcCCHHHHH
Q 010446 198 DEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGM------------AKVLGSIGRAKKAV 265 (510)
Q Consensus 198 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l------------a~~~~~~g~~~~A~ 265 (510)
|....++..+|.++...|++++|+..++++++.. +.......++..+ |.++...|++++|+
T Consensus 68 --~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~ 140 (359)
T 3ieg_A 68 --MDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSN-----PSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAI 140 (359)
T ss_dssp --TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred --CCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcC-----CcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHH
Confidence 3334568999999999999999999999998752 1000333344444 89999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCH
Q 010446 266 EIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNA 345 (510)
Q Consensus 266 ~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 345 (510)
.+++++++. .|....++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++
T Consensus 141 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~ 204 (359)
T 3ieg_A 141 TFLDKILEV--------CVWDAELRELRAECFIKEGEPRKAISDLKAASKL--------KSDNTEAFYKISTLYYQLGDH 204 (359)
T ss_dssp HHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------CSCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHh--------CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCH
Confidence 999999987 4556788999999999999999999999999874 344557889999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCChHHHHH---------HHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCh-hHH
Q 010446 346 EEAVELYKKALRVIKDSNYMSLDDSIMENM---------RIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHP-SFV 415 (510)
Q Consensus 346 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~---------~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~-~~~ 415 (510)
++|...++++++. .++....... ...+|.++...|++++|+..+++++... +..+ ...
T Consensus 205 ~~A~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-----~~~~~~~~ 272 (359)
T 3ieg_A 205 ELSLSEVRECLKL-------DQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTE-----PSVAEYTV 272 (359)
T ss_dssp HHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----CSSHHHHH
T ss_pred HHHHHHHHHHHhh-------CccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-----CCchHHHH
Confidence 9999999999987 3444443322 2355899999999999999999998863 2222 233
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 010446 416 THLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 487 (510)
Q Consensus 416 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 487 (510)
..+..+|.++...|++++|+..++++++. .|....++..+|.++...|++++|..+|++++++.
T Consensus 273 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~ 336 (359)
T 3ieg_A 273 RSKERICHCFSKDEKPVEAIRICSEVLQM--------EPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHN 336 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 56778999999999999999999999985 45556788999999999999999999999999753
No 8
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.97 E-value=1.1e-27 Score=229.35 Aligned_cols=312 Identities=16% Similarity=0.176 Sum_probs=271.7
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCCh-hHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhh
Q 010446 116 RQLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGI-EEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDS 194 (510)
Q Consensus 116 ~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~ 194 (510)
.....++..+..+...|++++|+.+++++++. .+.++ ..+.++..+|.++...|++++|+.++++++.+...
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~-------~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 118 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQA-------GTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKS 118 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------CCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHh-------cccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 34555778999999999999999999999987 23232 34578999999999999999999999999998876
Q ss_pred cCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCC--------------
Q 010446 195 LKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGR-------------- 260 (510)
Q Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-------------- 260 (510)
. .+.+....++..+|.+|...|++++|+.++++++++.... .+.+....++..+|.+|...|+
T Consensus 119 ~-~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a 195 (411)
T 4a1s_A 119 M-NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL--GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDV 195 (411)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHH
T ss_pred c-cCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh--hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhh
Confidence 4 4557788889999999999999999999999999998775 3456788899999999999999
Q ss_pred ---HHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Q 010446 261 ---AKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAH 337 (510)
Q Consensus 261 ---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 337 (510)
+++|+.++++++++..... +.+....++..+|.++...|++++|+.++++++++.... .+......++.++|.
T Consensus 196 ~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~ 271 (411)
T 4a1s_A 196 KEALTRAVEFYQENLKLMRDLG--DRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREF--GDRAAERRANSNLGN 271 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHH
Confidence 9999999999999887763 456677899999999999999999999999999998775 244556778999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHH
Q 010446 338 AKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTH 417 (510)
Q Consensus 338 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 417 (510)
++...|++++|+.++++++.+.... .+......++..+|.++...|++++|+.++++++.+..... +.+....+
T Consensus 272 ~~~~~g~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~ 345 (411)
T 4a1s_A 272 SHIFLGQFEDAAEHYKRTLALAVEL----GEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELG--DRIGEARA 345 (411)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHH
T ss_pred HHHHCcCHHHHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCC--ChHHHHHH
Confidence 9999999999999999999998863 44556677889999999999999999999999999987762 45566788
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Q 010446 418 LLNLAASYSRSKNFVEAERLLRICLDIMTK 447 (510)
Q Consensus 418 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 447 (510)
+..+|.+|...|++++|..++++++++.++
T Consensus 346 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 375 (411)
T 4a1s_A 346 CWSLGNAHSAIGGHERALKYAEQHLQLAXX 375 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999997544
No 9
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.97 E-value=2.8e-27 Score=219.80 Aligned_cols=310 Identities=17% Similarity=0.206 Sum_probs=267.2
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCC-hhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcC
Q 010446 118 LLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKG-IEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLK 196 (510)
Q Consensus 118 ~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 196 (510)
...++..|..+...|++++|+.+++++++. .+.. ...+.++..+|.++...|++++|+.++++++.+....
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~-------~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~- 76 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQV-------GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI- 76 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhh-------CcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcc-
Confidence 345777899999999999999999999987 2223 3346789999999999999999999999999887764
Q ss_pred CCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCC----------------
Q 010446 197 DDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGR---------------- 260 (510)
Q Consensus 197 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~---------------- 260 (510)
.+.+....++..+|.++...|++++|+.++++++++.... .+.+....++..+|.++...|+
T Consensus 77 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (338)
T 3ro2_A 77 GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--NDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPED 154 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHH
T ss_pred cccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh--cCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhh
Confidence 4556778889999999999999999999999999998774 3445677899999999999999
Q ss_pred ----HHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Q 010446 261 ----AKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLA 336 (510)
Q Consensus 261 ----~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la 336 (510)
+++|+.++++++.+.+... +.+....++..+|.++...|++++|+.++++++++.... .+.+....++.++|
T Consensus 155 a~~~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~ 230 (338)
T 3ro2_A 155 VRNALQAAVDLYEENLSLVTALG--DRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLG 230 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHH
Confidence 9999999999999887754 456677889999999999999999999999999998775 24455777899999
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHH
Q 010446 337 HAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVT 416 (510)
Q Consensus 337 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 416 (510)
.++...|++++|..++++++.+.... .++.....++..+|.++...|++++|+.++++++.+..... +.+....
T Consensus 231 ~~~~~~g~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~--~~~~~~~ 304 (338)
T 3ro2_A 231 NAYIFLGEFETASEYYKKTLLLARQL----KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELK--DRIGEGR 304 (338)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhh----cchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcC--CcHHHHH
Confidence 99999999999999999999998763 45666678889999999999999999999999999987763 3456677
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Q 010446 417 HLLNLAASYSRSKNFVEAERLLRICLDIMTK 447 (510)
Q Consensus 417 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 447 (510)
++..+|.+|...|++++|..++++++++..+
T Consensus 305 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 305 ACWSLGNAYTALGNHDQAMHFAEKHLEISRE 335 (338)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999997544
No 10
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.97 E-value=4.6e-27 Score=222.55 Aligned_cols=354 Identities=12% Similarity=0.073 Sum_probs=274.1
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH--HHHHHhhCChHHHH-----------H
Q 010446 117 QLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDII--ALGYVYIGDLKFVQ-----------S 183 (510)
Q Consensus 117 ~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~g~~~~A~-----------~ 183 (510)
.+...++........+++++|..+.+++.+.... ...+++.. .++.+ .......++++.+. .
T Consensus 11 ~v~~~l~~w~~~i~~~~~~~A~~l~~~i~~~~~~----~~~~~~~~-~y~~ll~~r~~~~~~~~~~~~~~~~e~~~~~~~ 85 (383)
T 3ulq_A 11 SIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQ----MEEDQDLH-LYYSLMEFRHNLMLEYLEPLEKMRIEEQPRLSD 85 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT----SCCCHHHH-HHHHHHHHHHHHHHHHHGGGGGSCGGGSCCHHH
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh----hccchHHH-HHHHHHHHHHHHHHhhcCcccccccccccchhh
Confidence 5566778888889999999999999998665332 11233222 22222 22223344444444 5
Q ss_pred HHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHH
Q 010446 184 LLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKK 263 (510)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 263 (510)
.+++....... .+.......++..|..+...|++++|+.++++++++.... ++.+..+.++..+|.+|...|++++
T Consensus 86 ~~~~i~~~~~~--~~~~l~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~~~~~~ 161 (383)
T 3ulq_A 86 LLLEIDKKQAR--LTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFV--KDRIEKAEFFFKMSESYYYMKQTYF 161 (383)
T ss_dssp HHHHHHHHTHH--HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHhcCCC--chhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 55554332111 0001112345569999999999999999999999886553 4455688999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCC
Q 010446 264 AVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANG 343 (510)
Q Consensus 264 A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 343 (510)
|+.++++++++.++.. ...+..+.++.++|.+|...|++++|+.++++++++.++. ++.+..+.++.++|.+|...|
T Consensus 162 A~~~~~~al~~~~~~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~g 238 (383)
T 3ulq_A 162 SMDYARQAYEIYKEHE-AYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE--KQPQLMGRTLYNIGLCKNSQS 238 (383)
T ss_dssp HHHHHHHHHHHHHTCS-TTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCc-cchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHCC
Confidence 9999999999987753 1256678899999999999999999999999999998876 345668889999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHH
Q 010446 344 NAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAA 423 (510)
Q Consensus 344 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 423 (510)
++++|+.++++++++.+.. .+.+....++.++|.++...|++++|+.++++++.+.... .++.....+..+|.
T Consensus 239 ~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~l~~ 311 (383)
T 3ulq_A 239 QYEDAIPYFKRAIAVFEES----NILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKA---GDVIYLSEFEFLKS 311 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHT----TCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhh----ccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHH
Confidence 9999999999999998763 3335567889999999999999999999999999998776 34444455778999
Q ss_pred HHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhcCCCC
Q 010446 424 SYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDS 495 (510)
Q Consensus 424 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 495 (510)
+|...|++ ..+++++.+.++. ...+....++..+|.+|...|++++|..++++++++.+++.+.++
T Consensus 312 ~~~~~~~~----~~~~~al~~~~~~--~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~i~~~e~ 377 (383)
T 3ulq_A 312 LYLSGPDE----EAIQGFFDFLESK--MLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVS 377 (383)
T ss_dssp HHTSSCCH----HHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTSCSSCCC
T ss_pred HHhCCCcH----HHHHHHHHHHHHC--cCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhccch
Confidence 99999995 4455555555544 446777888999999999999999999999999999998877554
No 11
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.97 E-value=3.1e-27 Score=229.08 Aligned_cols=313 Identities=15% Similarity=0.075 Sum_probs=261.5
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhc
Q 010446 116 RQLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSL 195 (510)
Q Consensus 116 ~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 195 (510)
.....++..+..+...|++++|+..|+++++. .|..+.++..+|.++...|++++|+..+++++...
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~----------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--- 90 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDG----------DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLK--- 90 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh----------CCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC---
Confidence 34555788899999999999999999999987 67778999999999999999999999999998874
Q ss_pred CCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHH------------HHHHHHHHhhcCCHHH
Q 010446 196 KDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTS------------LLGMAKVLGSIGRAKK 263 (510)
Q Consensus 196 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~------------~~~la~~~~~~g~~~~ 263 (510)
|....++..+|.+|...|++++|+..|+++++.. ++.+....+ +..+|.++...|++++
T Consensus 91 ----p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 161 (450)
T 2y4t_A 91 ----MDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSN-----PSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTA 161 (450)
T ss_dssp ----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred ----CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-----CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 3335668999999999999999999999998642 222210122 4455888999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCC
Q 010446 264 AVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANG 343 (510)
Q Consensus 264 A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 343 (510)
|+.+++++++. .|....++..+|.+|...|++++|+..++++++.. |....++..+|.++...|
T Consensus 162 A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~g 225 (450)
T 2y4t_A 162 AIAFLDKILEV--------CVWDAELRELRAECFIKEGEPRKAISDLKAASKLK--------NDNTEAFYKISTLYYQLG 225 (450)
T ss_dssp HHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHH--------CSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHh--------CCCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHcC
Confidence 99999999986 45567889999999999999999999999999863 333578899999999999
Q ss_pred CHHHHHHHHHHHHHHHHhhccCCCCChHHHHHH---------HHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChh-
Q 010446 344 NAEEAVELYKKALRVIKDSNYMSLDDSIMENMR---------IDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPS- 413 (510)
Q Consensus 344 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~---------~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~- 413 (510)
++++|+..+++++.. .++.......+ ..+|.++...|++++|+.+|++++.+. +.++.
T Consensus 226 ~~~~A~~~~~~~~~~-------~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~-----p~~~~~ 293 (450)
T 2y4t_A 226 DHELSLSEVRECLKL-------DQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTE-----PSIAEY 293 (450)
T ss_dssp CHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----CSSHHH
T ss_pred CHHHHHHHHHHHHHh-------CCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-----CcchHH
Confidence 999999999999976 34444433322 344999999999999999999998753 23332
Q ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 010446 414 FVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYI 486 (510)
Q Consensus 414 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 486 (510)
....+..+|.++...|++++|+..+++++.+ .|....++..+|.++...|++++|..+|++++++
T Consensus 294 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~--------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 358 (450)
T 2y4t_A 294 TVRSKERICHCFSKDEKPVEAIRVCSEVLQM--------EPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEH 358 (450)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 2568889999999999999999999999985 4556688999999999999999999999999874
No 12
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.96 E-value=3.8e-26 Score=226.61 Aligned_cols=207 Identities=13% Similarity=0.146 Sum_probs=153.2
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCC
Q 010446 246 TSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEND 325 (510)
Q Consensus 246 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 325 (510)
.++..+|.++...|++++|+.+++++++. .|....++..+|.++...|++++|+..+++++.. .
T Consensus 277 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~ 340 (537)
T 3fp2_A 277 NSYIFLALTLADKENSQEFFKFFQKAVDL--------NPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSL--------N 340 (537)
T ss_dssp HHHHHHHHHTCCSSCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------C
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHhcc--------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--------C
Confidence 34444555555555555555555555443 3445667777888888888888888888888774 2
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 010446 326 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEK 405 (510)
Q Consensus 326 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 405 (510)
|....++..+|.++...|++++|+.+++++++. .++.+ .++..+|.++...|++++|+..+++++.....
T Consensus 341 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~-------~~~~~---~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 410 (537)
T 3fp2_A 341 PENVYPYIQLACLLYKQGKFTESEAFFNETKLK-------FPTLP---EVPTFFAEILTDRGDFDTAIKQYDIAKRLEEV 410 (537)
T ss_dssp TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------CTTCT---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCCCh---HHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCc
Confidence 233356778888888888888888888888876 23332 35678899999999999999999999987754
Q ss_pred hhCCCChhHHHHHHHHHHHHHhc----------cCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHH
Q 010446 406 YKGKEHPSFVTHLLNLAASYSRS----------KNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKE 475 (510)
Q Consensus 406 ~~~~~~~~~~~~~~~la~~~~~~----------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 475 (510)
.. ........+..+|.++... |++++|+.+|+++++. +|....++..+|.+|...|++++
T Consensus 411 ~~--~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~p~~~~~~~~l~~~~~~~g~~~~ 480 (537)
T 3fp2_A 411 QE--KIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACEL--------DPRSEQAKIGLAQLKLQMEKIDE 480 (537)
T ss_dssp CS--SCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHH
T ss_pred ch--hhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhccHHH
Confidence 32 2222334466788899998 9999999999999985 45556788999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 010446 476 AEKLVLEALYIRE 488 (510)
Q Consensus 476 A~~~~~~al~~~~ 488 (510)
|..+|++++++..
T Consensus 481 A~~~~~~al~~~~ 493 (537)
T 3fp2_A 481 AIELFEDSAILAR 493 (537)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHhCC
Confidence 9999999998753
No 13
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.96 E-value=2.2e-27 Score=223.68 Aligned_cols=316 Identities=17% Similarity=0.136 Sum_probs=245.2
Q ss_pred HHHHcCChhHHHH-HHHHHHHHHHHHHhcCCCCh-hHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHH
Q 010446 127 SMIMMGNKNDAID-LLQANYEAVKEQINAGNKGI-EEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDA 204 (510)
Q Consensus 127 ~~~~~g~~~~A~~-~~~~al~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 204 (510)
.+...|++++|+. .+++++.. .+..| .....+..+|.++...|++++|+..+++++... |....
T Consensus 34 ~~~~~~~~~~a~~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-------p~~~~ 99 (368)
T 1fch_A 34 AHPWLSDYDDLTSATYDKGYQF-------EEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQD-------PKHME 99 (368)
T ss_dssp ------------CHHHHCCCCC-------CSSCTTTTCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSC-------TTCHH
T ss_pred hhHHHHHHHHHHhhhhhHHHhc-------CCCCcccchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-------CCCHH
Confidence 4556789999998 88888754 22222 235678899999999999999999999998763 33455
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCc
Q 010446 205 ILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESA 284 (510)
Q Consensus 205 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 284 (510)
++..+|.++...|++++|+..++++++.. |....++..+|.++...|++++|+..+++++.... +.+
T Consensus 100 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~--------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~-----~~~ 166 (368)
T 1fch_A 100 AWQYLGTTQAENEQELLAISALRRCLELK--------PDNQTALMALAVSFTNESLQRQACEILRDWLRYTP-----AYA 166 (368)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTST-----TTG
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-----CcH
Confidence 68999999999999999999999999862 44567899999999999999999999999998621 111
Q ss_pred chH-------------HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHH
Q 010446 285 DLV-------------LPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVEL 351 (510)
Q Consensus 285 ~~~-------------~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 351 (510)
... ..+..++.++ ..|++++|+..+++++... +..+ ...++..+|.++...|++++|+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~-----p~~~-~~~~~~~l~~~~~~~g~~~~A~~~ 239 (368)
T 1fch_A 167 HLVTPAEEGAGGAGLGPSKRILGSLL-SDSLFLEVKELFLAAVRLD-----PTSI-DPDVQCGLGVLFNLSGEYDKAVDC 239 (368)
T ss_dssp GGCC---------------CTTHHHH-HHHHHHHHHHHHHHHHHHS-----TTSC-CHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHhhhhcccHHHHHHHHHh-hcccHHHHHHHHHHHHHhC-----cCcc-cHHHHHHHHHHHHHcCCHHHHHHH
Confidence 111 1112566666 8999999999999999862 2211 467888999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCH
Q 010446 352 YKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNF 431 (510)
Q Consensus 352 ~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 431 (510)
+++++.. .++. ..++..+|.++...|++++|+..+++++.+ .|....++..+|.+|...|++
T Consensus 240 ~~~al~~-------~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~g~~ 301 (368)
T 1fch_A 240 FTAALSV-------RPND---YLLWNKLGATLANGNQSEEAVAAYRRALEL--------QPGYIRSRYNLGISCINLGAH 301 (368)
T ss_dssp HHHHHHH-------CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHh-------CcCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHCCCH
Confidence 9999987 2333 356789999999999999999999999886 345567899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhC---CCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhcCCC
Q 010446 432 VEAERLLRICLDIMTKTVG---PDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKD 494 (510)
Q Consensus 432 ~~A~~~~~~al~~~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 494 (510)
++|+.+|++++.+.....+ ..++....++..+|.++...|++++|..+++++++...+.++-+
T Consensus 302 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~ 367 (368)
T 1fch_A 302 REAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADARDLSTLLTMFGLP 367 (368)
T ss_dssp HHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHHHHHTTCHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHHHhHHHHHHHHHHhcCCC
Confidence 9999999999997654321 12344578899999999999999999999999999998887643
No 14
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.96 E-value=2.4e-25 Score=223.87 Aligned_cols=319 Identities=13% Similarity=0.047 Sum_probs=254.9
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHH-----------------------------------------------
Q 010446 118 LLELFNEVKSMIMMGNKNDAIDLLQANYEAVKE----------------------------------------------- 150 (510)
Q Consensus 118 ~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~----------------------------------------------- 150 (510)
...+...+..+...|++++|+..|+++++....
T Consensus 200 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 279 (597)
T 2xpi_A 200 ASMCYLRGQVYTNLSNFDRAKECYKEALMVDAKCYEAFDQLVSNHLLTADEEWDLVLKLNYSTYSKEDAAFLRSLYMLKL 279 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCSCHHHHHHHHHHSCTHHHHGGGHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCchhhHHHHHHHHhhcccchhHHHHHHhcCCcccccchHHHHHHHHHHHH
Confidence 455778889999999999999999999764110
Q ss_pred --------------HHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhh
Q 010446 151 --------------QINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTL 216 (510)
Q Consensus 151 --------------~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 216 (510)
.+......+....++..+|.++...|++++|+..|++++... +. ...++..++.++...
T Consensus 280 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~----~~---~~~~~~~l~~~~~~~ 352 (597)
T 2xpi_A 280 NKTSHEDELRRAEDYLSSINGLEKSSDLLLCKADTLFVRSRFIDVLAITTKILEID----PY---NLDVYPLHLASLHES 352 (597)
T ss_dssp CTTTTHHHHHHHHHHHHTSTTGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----TT---CCTTHHHHHHHHHHH
T ss_pred HHHcCcchHHHHHHHHHHhhcCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcC----cc---cHHHHHHHHHHHHHh
Confidence 000001113455667777888888888888888888777543 11 122366777788888
Q ss_pred hcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHH
Q 010446 217 ENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSL 296 (510)
Q Consensus 217 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~ 296 (510)
|++++|...+++++.. .|....++..+|.+|...|++++|+.+|++++++ .|....++..+|.+
T Consensus 353 g~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~ 416 (597)
T 2xpi_A 353 GEKNKLYLISNDLVDR--------HPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTM--------DPQFGPAWIGFAHS 416 (597)
T ss_dssp TCHHHHHHHHHHHHHH--------CTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhh--------CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHH
Confidence 8888888888877653 2344677888999999999999999999999986 45567789999999
Q ss_pred HHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHH
Q 010446 297 FIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMR 376 (510)
Q Consensus 297 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 376 (510)
|...|++++|+..|+++++. .|....++..+|.+|...|++++|+.+|+++++. .++.+ .++
T Consensus 417 ~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~-------~~~~~---~~~ 478 (597)
T 2xpi_A 417 FAIEGEHDQAISAYTTAARL--------FQGTHLPYLFLGMQHMQLGNILLANEYLQSSYAL-------FQYDP---LLL 478 (597)
T ss_dssp HHHHTCHHHHHHHHHHHHHT--------TTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-------CCCCH---HHH
T ss_pred HHHcCCHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCCCh---HHH
Confidence 99999999999999999874 2334567888999999999999999999999887 33333 457
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChh-HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChh
Q 010446 377 IDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPS-FVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQS 455 (510)
Q Consensus 377 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 455 (510)
..+|.++...|++++|+.+|+++++..... +..|. ...++..+|.+|...|++++|+..++++++. .|.
T Consensus 479 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~--~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------~p~ 548 (597)
T 2xpi_A 479 NELGVVAFNKSDMQTAINHFQNALLLVKKT--QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL--------STN 548 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------SSC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhhhcc--ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCC
Confidence 899999999999999999999999886553 23444 3788999999999999999999999999985 345
Q ss_pred hHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 010446 456 ISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 487 (510)
Q Consensus 456 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 487 (510)
...++..+|.+|...|++++|..+|++++++.
T Consensus 549 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~ 580 (597)
T 2xpi_A 549 DANVHTAIALVYLHKKIPGLAITHLHESLAIS 580 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 56788999999999999999999999999863
No 15
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.96 E-value=1.5e-25 Score=211.64 Aligned_cols=350 Identities=15% Similarity=0.098 Sum_probs=264.8
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHH--HHHhhCChHHHH---------HHH
Q 010446 117 QLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIAL--GYVYIGDLKFVQ---------SLL 185 (510)
Q Consensus 117 ~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~g~~~~A~---------~~~ 185 (510)
++..+++........+++++|..+++++...... -..+.. ...++.+-. .....+++..+. ..+
T Consensus 11 ~v~~~l~~wy~~i~~~~~~~A~~l~~~i~~~~~~----~~~~~~-~~~yy~l~~~r~~~~~~~~~~~~~~~~~~~~~~~l 85 (378)
T 3q15_A 11 RVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQ----MEEDQD-LLIYYSLMCFRHQLMLDYLEPGKTYGNRPTVTELL 85 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGG----BCCCHH-HHHHHHHHHHHHHHHHHTCCC--------CHHHHH
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH----hcccHH-HHHHHHHHHHHHHHHHhhcCcccccccccchHHHH
Confidence 4455666666678999999999999987654222 112222 223333222 222234444443 555
Q ss_pred HHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHH
Q 010446 186 DMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAV 265 (510)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 265 (510)
+........ .+.......++..|..+...|++++|+.+|++++++.... ++.+..+.++.++|.+|...|++++|+
T Consensus 86 ~~i~~~~~~--~~~~l~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~y~~~~~~~~A~ 161 (378)
T 3q15_A 86 ETIETPQKK--LTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFV--SDDIEKAEFHFKVAEAYYHMKQTHVSM 161 (378)
T ss_dssp HHHHGGGHH--HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHhccCCC--CccHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhC--CChHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 544332211 1112223356788999999999999999999999887654 345678899999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCH
Q 010446 266 EIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNA 345 (510)
Q Consensus 266 ~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 345 (510)
.++++++++.++..+ ..+..+.++.++|.+|...|++++|+.++++++++.+.. ++.+..+.++.++|.+|...|++
T Consensus 162 ~~~~~al~~~~~~~~-~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~~~~ 238 (378)
T 3q15_A 162 YHILQALDIYQNHPL-YSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDI--QNDRFIAISLLNIANSYDRSGDD 238 (378)
T ss_dssp HHHHHHHHHHHTSTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHhCCC-chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHCCCH
Confidence 999999999876431 134568889999999999999999999999999998775 24456778999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHH
Q 010446 346 EEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASY 425 (510)
Q Consensus 346 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 425 (510)
++|+.++++++.+.+.. .++....++.++|.++...|++++|+.++++++.+..+. ..+.....+..++.+|
T Consensus 239 ~~A~~~~~~al~~~~~~-----~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~l~~ly 310 (378)
T 3q15_A 239 QMAVEHFQKAAKVSREK-----VPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITAR---SHKFYKELFLFLQAVY 310 (378)
T ss_dssp HHHHHHHHHHHHHHHHH-----CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTT---CCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh-----CChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHH
Confidence 99999999999988763 233347788999999999999999999999999987654 2344445678899999
Q ss_pred HhccC---HHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhcCCCC
Q 010446 426 SRSKN---FVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDS 495 (510)
Q Consensus 426 ~~~g~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 495 (510)
...|+ +.+|+.++++ . ...+.....+..+|.+|...|++++|..+|++++++.+++.+.++
T Consensus 311 ~~~~~~~~~~~al~~~~~-------~--~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~ 374 (378)
T 3q15_A 311 KETVDERKIHDLLSYFEK-------K--NLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGEC 374 (378)
T ss_dssp SSSCCHHHHHHHHHHHHH-------T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hCCCcHHHHHHHHHHHHh-------C--CChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhccch
Confidence 99998 5555555543 2 345667778899999999999999999999999999998876544
No 16
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.95 E-value=2.6e-26 Score=212.78 Aligned_cols=297 Identities=14% Similarity=0.137 Sum_probs=247.5
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCc
Q 010446 120 ELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDE 199 (510)
Q Consensus 120 ~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 199 (510)
.++..+..++..|++++|+.++++++.. .|....++..++.++...|++++|+..+++++...
T Consensus 24 ~~~~~a~~~~~~g~~~~A~~~~~~~l~~----------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~------- 86 (330)
T 3hym_B 24 VVVSLAERHYYNCDFKMCYKLTSVVMEK----------DPFHASCLPVHIGTLVELNKANELFYLSHKLVDLY------- 86 (330)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHH----------CTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHc----------CCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhC-------
Confidence 3667888999999999999999999987 66667788889999999999999999999998764
Q ss_pred hHHHHHHHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHh
Q 010446 200 PLLDAILLHMGSMYSTLE-NYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELN 278 (510)
Q Consensus 200 ~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 278 (510)
|....++..+|.++...| ++++|+.++++++.. .|....++..+|.++...|++++|+.+++++++.
T Consensus 87 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~---- 154 (330)
T 3hym_B 87 PSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTL--------EKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQL---- 154 (330)
T ss_dssp TTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTT--------CTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----
T ss_pred cCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh----
Confidence 233445889999999999 999999999999874 2444567899999999999999999999999987
Q ss_pred cCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 279 RGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 279 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
.|....++..+|.++...|++++|+.+++++++. .|....++..+|.++...|++++|+.++++++..
T Consensus 155 ----~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 222 (330)
T 3hym_B 155 ----MKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSI--------APEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEK 222 (330)
T ss_dssp ----TTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ----ccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 3444567888999999999999999999999874 3445678899999999999999999999999998
Q ss_pred HHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHH
Q 010446 359 IKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLL 438 (510)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 438 (510)
...... ....+....++..+|.++...|++++|+.++++++.+. |....++..+|.+|...|++++|+.++
T Consensus 223 ~~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~--------~~~~~~~~~la~~~~~~g~~~~A~~~~ 293 (330)
T 3hym_B 223 IKAIGN-EVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLI--------PQNASTYSAIGYIHSLMGNFENAVDYF 293 (330)
T ss_dssp HTTTSC-SCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------TTCSHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred hhhccc-cccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC--------ccchHHHHHHHHHHHHhccHHHHHHHH
Confidence 765311 11112334577899999999999999999999999863 344578899999999999999999999
Q ss_pred HHHHHHHHHHhCCCChhhHHHHHHHHHHHH-hcCChH
Q 010446 439 RICLDIMTKTVGPDDQSISFPMLHLGITLY-HLNRDK 474 (510)
Q Consensus 439 ~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~ 474 (510)
++++++ .|....++..++.++. ..|+.+
T Consensus 294 ~~al~~--------~p~~~~~~~~l~~~~~~~~g~~~ 322 (330)
T 3hym_B 294 HTALGL--------RRDDTFSVTMLGHCIEMYIGDSE 322 (330)
T ss_dssp HTTTTT--------CSCCHHHHHHHHHHHHTTTTC--
T ss_pred HHHHcc--------CCCchHHHHHHHHHHHHHhCchh
Confidence 999873 4556678899999884 556543
No 17
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.95 E-value=8.4e-27 Score=219.43 Aligned_cols=296 Identities=16% Similarity=0.083 Sum_probs=231.3
Q ss_pred hHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCC
Q 010446 160 EEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGK 239 (510)
Q Consensus 160 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 239 (510)
..+..+..+|..+...|++++|+..+++++... |....++..+|.++...|++++|+..|++++++
T Consensus 63 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------- 128 (365)
T 4eqf_A 63 KDWPGAFEEGLKRLKEGDLPVTILFMEAAILQD-------PGDAEAWQFLGITQAENENEQAAIVALQRCLEL------- 128 (365)
T ss_dssp TTCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred cchhHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-------cCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc-------
Confidence 445668999999999999999999999998874 334566899999999999999999999999986
Q ss_pred CChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCc--chHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q 010446 240 TSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESA--DLVLPLFSLGSLFIKEGKAVDAESVFSRILKIY 317 (510)
Q Consensus 240 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~--~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 317 (510)
.|....++..+|.+|...|++++|+.++++++++.......... .....+..+|.++...|++++|+.++++++...
T Consensus 129 -~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 207 (365)
T 4eqf_A 129 -QPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQN 207 (365)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHS
T ss_pred -CCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhC
Confidence 24457789999999999999999999999999974432211000 123345567999999999999999999999862
Q ss_pred HHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHH
Q 010446 318 TKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLE 397 (510)
Q Consensus 318 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 397 (510)
+.. ....++.++|.++...|++++|+.+++++++. .++. ..++.++|.++...|++++|+.+|+
T Consensus 208 -----p~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-------~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~ 271 (365)
T 4eqf_A 208 -----GDM-IDPDLQTGLGVLFHLSGEFNRAIDAFNAALTV-------RPED---YSLWNRLGATLANGDRSEEAVEAYT 271 (365)
T ss_dssp -----CSS-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-------CTTC---HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred -----cCc-cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh-------CCCC---HHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 221 04567889999999999999999999999987 2333 4577999999999999999999999
Q ss_pred HHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChh----hHHHHHHHHHHHHhcCCh
Q 010446 398 ECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQS----ISFPMLHLGITLYHLNRD 473 (510)
Q Consensus 398 ~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~----~~~~~~~la~~~~~~g~~ 473 (510)
+++.+ .|....++..+|.+|...|++++|+.+|++++++.....++.++. ...++..++.++...|+.
T Consensus 272 ~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 343 (365)
T 4eqf_A 272 RALEI--------QPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQP 343 (365)
T ss_dssp HHHHH--------CTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCH
T ss_pred HHHhc--------CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcH
Confidence 99986 355578899999999999999999999999999876544332221 357789999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCC
Q 010446 474 KEAEKLVLEALYIREIAFGKD 494 (510)
Q Consensus 474 ~~A~~~~~~al~~~~~~~~~~ 494 (510)
+.|.....+.++...+.++.+
T Consensus 344 ~~a~~~~~~~l~~~~~~~~~~ 364 (365)
T 4eqf_A 344 ELFQAANLGDLDVLLRAFNLD 364 (365)
T ss_dssp HHHHHHHTTCCGGGTTTTTCC
T ss_pred HHHHHHHHhhHHHHHHhcCCC
Confidence 999999888877777666644
No 18
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.95 E-value=1.4e-24 Score=205.50 Aligned_cols=271 Identities=13% Similarity=0.079 Sum_probs=228.6
Q ss_pred HHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCCh
Q 010446 163 AILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSI 242 (510)
Q Consensus 163 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 242 (510)
..++..|..+...|++++|+..+++++.+.... ++.+..+.+++.+|.+|...|++++|+.++++++++.... +...+
T Consensus 104 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~ 181 (383)
T 3ulq_A 104 YFNFFRGMYELDQREYLSAIKFFKKAESKLIFV-KDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAYNI 181 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC-CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-STTHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhC-CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-ccchH
Confidence 345669999999999999999999999987664 4556678889999999999999999999999999998775 22256
Q ss_pred hHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcC
Q 010446 243 LLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYG 322 (510)
Q Consensus 243 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 322 (510)
..+.++.++|.+|...|++++|+.++++++++.++.. +.+..+.++.++|.+|...|++++|+.++++++++.+...
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~- 258 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK--QPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESN- 258 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhc-
Confidence 7789999999999999999999999999999988753 5667778999999999999999999999999999987752
Q ss_pred CCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 323 ENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 402 (510)
Q Consensus 323 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 402 (510)
+.+....++.++|.++...|++++|..++++++.+.... .++ .....+..+|.++...|++ ..+++++..
T Consensus 259 -~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~----~~~-~~~~~~~~l~~~~~~~~~~----~~~~~al~~ 328 (383)
T 3ulq_A 259 -ILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKA----GDV-IYLSEFEFLKSLYLSGPDE----EAIQGFFDF 328 (383)
T ss_dssp -CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH----TCH-HHHHHHHHHHHHHTSSCCH----HHHHHHHHH
T ss_pred -cchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc----CCH-HHHHHHHHHHHHHhCCCcH----HHHHHHHHH
Confidence 227778999999999999999999999999999998764 233 3333367899999999995 344455555
Q ss_pred HHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhC
Q 010446 403 TEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVG 450 (510)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 450 (510)
.++. ...+....++..+|.+|...|++++|..++++++++.++...
T Consensus 329 ~~~~--~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~i~~ 374 (383)
T 3ulq_A 329 LESK--MLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQG 374 (383)
T ss_dssp HHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTSCSS
T ss_pred HHHC--cCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhc
Confidence 4444 345677788999999999999999999999999998776544
No 19
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.95 E-value=1.6e-25 Score=205.55 Aligned_cols=284 Identities=21% Similarity=0.246 Sum_probs=234.4
Q ss_pred cCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Q 010446 195 LKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITI 274 (510)
Q Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 274 (510)
.+.++|....++..+|.++...|++++|+.++++++++.....+++.+....++..+|.++...|++++|+.++++++++
T Consensus 19 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 98 (311)
T 3nf1_A 19 GGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAI 98 (311)
T ss_dssp SCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 46778888999999999999999999999999999999988876678889999999999999999999999999999999
Q ss_pred HHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Q 010446 275 LELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKK 354 (510)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 354 (510)
.++..+.+.+....++..+|.++...|++++|+.++++++++.+...+++++....++.++|.++...|++++|+.++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 178 (311)
T 3nf1_A 99 REKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQR 178 (311)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 98887777888899999999999999999999999999999998888888899999999999999999999999999999
Q ss_pred HHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhh-CCCChh------HHHHHHHHHHHHHh
Q 010446 355 ALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYK-GKEHPS------FVTHLLNLAASYSR 427 (510)
Q Consensus 355 al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~~------~~~~~~~la~~~~~ 427 (510)
++...... .+++++....++..+|.++...|++++|+.++++++.+..... +...+. ....+..++..+..
T Consensus 179 a~~~~~~~--~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T 3nf1_A 179 ALEIYQTK--LGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKD 256 (311)
T ss_dssp HHHHHHHT--SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC------
T ss_pred HHHHHHHH--hCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhh
Confidence 99998764 3456777788999999999999999999999999998765431 111111 22334444555556
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 010446 428 SKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIRE 488 (510)
Q Consensus 428 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 488 (510)
.+.+.+|...++++.. .+|....++..+|.+|..+|++++|..+|++++++.+
T Consensus 257 ~~~~~~a~~~~~~~~~--------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~ 309 (311)
T 3nf1_A 257 GTSFGEYGGWYKACKV--------DSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRK 309 (311)
T ss_dssp -CCSCCCC-----------------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhcCC--------CCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhh
Confidence 6666677777776654 4688889999999999999999999999999999864
No 20
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.2e-25 Score=219.91 Aligned_cols=320 Identities=15% Similarity=0.112 Sum_probs=264.2
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcC
Q 010446 117 QLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLK 196 (510)
Q Consensus 117 ~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 196 (510)
....++..|..+...|++++|+..|++++.. .| .+.++..+|.++...|++++|+..+++++...
T Consensus 5 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~----------~p-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~---- 69 (514)
T 2gw1_A 5 YALALKDKGNQFFRNKKYDDAIKYYNWALEL----------KE-DPVFYSNLSACYVSVGDLKKVVEMSTKALELK---- 69 (514)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH----------CC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC----
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHhc----------Cc-cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccC----
Confidence 4556888999999999999999999999987 44 37789999999999999999999999998764
Q ss_pred CCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHh-----------------------c----------------
Q 010446 197 DDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESR-----------------------Y---------------- 237 (510)
Q Consensus 197 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----------------------~---------------- 237 (510)
|....++..+|.++...|++++|+..|++++...... .
T Consensus 70 ---p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 146 (514)
T 2gw1_A 70 ---PDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELSTQ 146 (514)
T ss_dssp ---SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCGGGTHHHHHHHHHHHHHHHHTTC-----------------
T ss_pred ---hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC
Confidence 3344668999999999999999999999987642100 0
Q ss_pred --------CC------------------------CChhHHHHHHHHHHHHhh---cCCHHHHHHHHHHHHHHHHHhc--C
Q 010446 238 --------GK------------------------TSILLVTSLLGMAKVLGS---IGRAKKAVEIYHRVITILELNR--G 280 (510)
Q Consensus 238 --------~~------------------------~~~~~~~~~~~la~~~~~---~g~~~~A~~~~~~al~~~~~~~--~ 280 (510)
.+ ..+.....+..+|.++.. .|++++|+.+++++++..+... .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 226 (514)
T 2gw1_A 147 PAKERKDKQENLPSVTSMASFFGIFKPELTFANYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKN 226 (514)
T ss_dssp ----------CCCCHHHHHHHHTTSCCCCCCSSCCSSCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred hhhHHHhhccCCchhHHHHHHHhhcCHHHHHHHhcCCcHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccC
Confidence 00 002226667788888776 8999999999999999654433 2
Q ss_pred CCC----cchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 010446 281 TES----ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKAL 356 (510)
Q Consensus 281 ~~~----~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 356 (510)
++. +....++..+|.++...|++++|+..++++++. .|. ..++..+|.++...|++++|+..+++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~--------~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~ 297 (514)
T 2gw1_A 227 NEDEKLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIEL--------FPR-VNSYIYMALIMADRNDSTEYYNYFDKAL 297 (514)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHH--------CCC-HHHHHHHHHHHHTSSCCTTGGGHHHHHH
T ss_pred ccccccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhh--------Ccc-HHHHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 222 566788999999999999999999999999985 233 7889999999999999999999999998
Q ss_pred HHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHH
Q 010446 357 RVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAER 436 (510)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 436 (510)
.. .+... .++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+.
T Consensus 298 ~~-------~~~~~---~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~ 359 (514)
T 2gw1_A 298 KL-------DSNNS---SVYYHRGQMNFILQNYDQAGKDFDKAKEL--------DPENIFPYIQLACLAYRENKFDDCET 359 (514)
T ss_dssp TT-------CTTCT---HHHHHHHHHHHHTTCTTHHHHHHHHHHHT--------CSSCSHHHHHHHHHTTTTTCHHHHHH
T ss_pred hc-------CcCCH---HHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------ChhhHHHHHHHHHHHHHcCCHHHHHH
Confidence 76 23332 35688999999999999999999999874 23345688899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 010446 437 LLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREI 489 (510)
Q Consensus 437 ~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 489 (510)
.+++++.. .|....++..+|.++...|++++|..++++++++...
T Consensus 360 ~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 404 (514)
T 2gw1_A 360 LFSEAKRK--------FPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENK 404 (514)
T ss_dssp HHHHHHHH--------STTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHH--------cccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 99999985 3444567899999999999999999999999987654
No 21
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.95 E-value=3.6e-26 Score=215.10 Aligned_cols=285 Identities=15% Similarity=0.039 Sum_probs=225.8
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCch
Q 010446 121 LFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEP 200 (510)
Q Consensus 121 l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 200 (510)
++..|..+...|++++|+.+|++++.. .|..+.++..+|.++...|++++|+..+++++.+. |
T Consensus 68 ~~~~~~~~~~~g~~~~A~~~~~~al~~----------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-------p 130 (365)
T 4eqf_A 68 AFEEGLKRLKEGDLPVTILFMEAAILQ----------DPGDAEAWQFLGITQAENENEQAAIVALQRCLELQ-------P 130 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------T
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHh----------CcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-------C
Confidence 667899999999999999999999988 77778999999999999999999999999998874 3
Q ss_pred HHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCCh--hHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHh
Q 010446 201 LLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSI--LLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELN 278 (510)
Q Consensus 201 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~--~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 278 (510)
....++..+|.+|...|++++|+.++++++++.......... .....+..+|.++...|++++|+.+++++++.
T Consensus 131 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~---- 206 (365)
T 4eqf_A 131 NNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQ---- 206 (365)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHh----
Confidence 335568999999999999999999999999875432111000 12345566799999999999999999999987
Q ss_pred cCCCCcc--hHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 010446 279 RGTESAD--LVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKAL 356 (510)
Q Consensus 279 ~~~~~~~--~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 356 (510)
.|. ...++..+|.++...|++++|+.+++++++. .|....++.++|.++...|++++|+.+|++++
T Consensus 207 ----~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 274 (365)
T 4eqf_A 207 ----NGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTV--------RPEDYSLWNRLGATLANGDRSEEAVEAYTRAL 274 (365)
T ss_dssp ----SCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ----CcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 333 5678999999999999999999999999986 34446789999999999999999999999999
Q ss_pred HHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCh----hHHHHHHHHHHHHHhccCHH
Q 010446 357 RVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHP----SFVTHLLNLAASYSRSKNFV 432 (510)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~----~~~~~~~~la~~~~~~g~~~ 432 (510)
+. .|+. ..++.++|.++...|++++|+.+|++++.+.....++.++ ....++..++.++...|+.+
T Consensus 275 ~~-------~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 344 (365)
T 4eqf_A 275 EI-------QPGF---IRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPE 344 (365)
T ss_dssp HH-------CTTC---HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHH
T ss_pred hc-------CCCc---hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHH
Confidence 87 2333 4577899999999999999999999999988665433222 13568899999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 010446 433 EAERLLRICLDIMTKT 448 (510)
Q Consensus 433 ~A~~~~~~al~~~~~~ 448 (510)
.|....++.++...+.
T Consensus 345 ~a~~~~~~~l~~~~~~ 360 (365)
T 4eqf_A 345 LFQAANLGDLDVLLRA 360 (365)
T ss_dssp HHHHHHTTCCGGGTTT
T ss_pred HHHHHHHhhHHHHHHh
Confidence 9998887766654433
No 22
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.6e-25 Score=220.86 Aligned_cols=322 Identities=15% Similarity=0.071 Sum_probs=262.2
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCC
Q 010446 118 LLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKD 197 (510)
Q Consensus 118 ~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 197 (510)
...+...+..+...|++++|+..++++++. .|....++..+|.++...|++++|+..|++++........
T Consensus 39 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~----------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 108 (514)
T 2gw1_A 39 PVFYSNLSACYVSVGDLKKVVEMSTKALEL----------KPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDA 108 (514)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCGG
T ss_pred HHHHHhHHHHHHHHhhHHHHHHHHHHHhcc----------ChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCccc
Confidence 345778899999999999999999999987 7778899999999999999999999999988765420000
Q ss_pred ------------------------------------------------------------------------CchHHHHH
Q 010446 198 ------------------------------------------------------------------------DEPLLDAI 205 (510)
Q Consensus 198 ------------------------------------------------------------------------~~~~~~~~ 205 (510)
..|.....
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (514)
T 2gw1_A 109 SIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELSTQPAKERKDKQENLPSVTSMASFFGIFKPELTFANYDESNEADK 188 (514)
T ss_dssp GTHHHHHHHHHHHHHHHHTTC---------------------------CCCCHHHHHHHHTTSCCCCCCSSCCSSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhhHHHhhccCCchhHHHHHHHhhcCHHHHHHHhcCCcHHHH
Confidence 00122555
Q ss_pred HHHHHHHHHh---hhcHHHHHHHHHHHHHHHHHhc--CCCC----hhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 010446 206 LLHMGSMYST---LENYEKSMLVYQRVINVLESRY--GKTS----ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILE 276 (510)
Q Consensus 206 ~~~l~~~~~~---~g~~~~A~~~~~~al~~~~~~~--~~~~----~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 276 (510)
+..+|.++.. .|++++|+..++++++..+... .+++ +....++..+|.++...|++++|+.+++++++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-- 266 (514)
T 2gw1_A 189 ELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIEL-- 266 (514)
T ss_dssp HHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhh--
Confidence 6778887776 8999999999999999654443 2232 567889999999999999999999999999987
Q ss_pred HhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 010446 277 LNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKAL 356 (510)
Q Consensus 277 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 356 (510)
.|. ..++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+..+++++
T Consensus 267 ------~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~ 331 (514)
T 2gw1_A 267 ------FPR-VNSYIYMALIMADRNDSTEYYNYFDKALKL--------DSNNSSVYYHRGQMNFILQNYDQAGKDFDKAK 331 (514)
T ss_dssp ------CCC-HHHHHHHHHHHHTSSCCTTGGGHHHHHHTT--------CTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHH
T ss_pred ------Ccc-HHHHHHHHHHHHHCCCHHHHHHHHHHHhhc--------CcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 344 888999999999999999999999999874 33445678899999999999999999999998
Q ss_pred HHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHH
Q 010446 357 RVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAER 436 (510)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 436 (510)
.. .+... .++..+|.++...|++++|+.++++++... |....++..+|.++...|++++|+.
T Consensus 332 ~~-------~~~~~---~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~la~~~~~~~~~~~A~~ 393 (514)
T 2gw1_A 332 EL-------DPENI---FPYIQLACLAYRENKFDDCETLFSEAKRKF--------PEAPEVPNFFAEILTDKNDFDKALK 393 (514)
T ss_dssp HT-------CSSCS---HHHHHHHHHTTTTTCHHHHHHHHHHHHHHS--------TTCSHHHHHHHHHHHHTTCHHHHHH
T ss_pred Hh-------ChhhH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHHc--------ccCHHHHHHHHHHHHHCCCHHHHHH
Confidence 86 33332 366889999999999999999999998752 3334678899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHh---cCChHHHHHHHHHHHHH
Q 010446 437 LLRICLDIMTKTVGPDDQSISFPMLHLGITLYH---LNRDKEAEKLVLEALYI 486 (510)
Q Consensus 437 ~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~---~g~~~~A~~~~~~al~~ 486 (510)
++++++...... +.......++..+|.++.. .|++++|..++++++++
T Consensus 394 ~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~ 444 (514)
T 2gw1_A 394 QYDLAIELENKL--DGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKL 444 (514)
T ss_dssp HHHHHHHHHHTS--SSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcc--chHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHh
Confidence 999999865331 1111223477888888888 89999999888888875
No 23
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.95 E-value=6.7e-25 Score=220.62 Aligned_cols=316 Identities=13% Similarity=0.129 Sum_probs=258.0
Q ss_pred cCCCCCchHHhhhhhhhhhhcccccchHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHH
Q 010446 86 SGFSAPNDFARSKTLHDHSSNLWDGMNDFERQLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAIL 165 (510)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 165 (510)
..+...+++..+..++..+... ......+...+..+...|++++|+.+|+++++. .|....++
T Consensus 280 ~~~~~~g~~~~A~~~~~~~~~~-------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~----------~~~~~~~~ 342 (597)
T 2xpi_A 280 NKTSHEDELRRAEDYLSSINGL-------EKSSDLLLCKADTLFVRSRFIDVLAITTKILEI----------DPYNLDVY 342 (597)
T ss_dssp CTTTTHHHHHHHHHHHHTSTTG-------GGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------CTTCCTTH
T ss_pred HHHcCcchHHHHHHHHHHhhcC-------CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHc----------CcccHHHH
Confidence 3444445555555555544422 123445777889999999999999999999976 55667788
Q ss_pred HHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHH
Q 010446 166 DIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLV 245 (510)
Q Consensus 166 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 245 (510)
..++.++...|++++|...++++.... |....++..+|.+|...|++++|+.+|+++++. .|...
T Consensus 343 ~~l~~~~~~~g~~~~A~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------~~~~~ 407 (597)
T 2xpi_A 343 PLHLASLHESGEKNKLYLISNDLVDRH-------PEKAVTWLAVGIYYLCVNKISEARRYFSKSSTM--------DPQFG 407 (597)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHC-------TTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhC-------cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCCH
Confidence 999999999999999999999988553 333455888999999999999999999999875 23446
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCC
Q 010446 246 TSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEND 325 (510)
Q Consensus 246 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 325 (510)
.++..++.+|...|++++|+.+++++++. .|....++..+|.+|...|++++|+.+|+++++. .
T Consensus 408 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------~ 471 (597)
T 2xpi_A 408 PAWIGFAHSFAIEGEHDQAISAYTTAARL--------FQGTHLPYLFLGMQHMQLGNILLANEYLQSSYAL--------F 471 (597)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHT--------TTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------C
Confidence 78899999999999999999999999875 3445678899999999999999999999999875 2
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 010446 326 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEK 405 (510)
Q Consensus 326 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 405 (510)
|....++..+|.++...|++++|+.+|+++++...+. +.++.....++..+|.++...|++++|+..++++++..
T Consensus 472 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~---~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-- 546 (597)
T 2xpi_A 472 QYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKT---QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLS-- 546 (597)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS---CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--
T ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcc---ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--
Confidence 2334678999999999999999999999999987653 33444346688999999999999999999999998762
Q ss_pred hhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHH
Q 010446 406 YKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLY 468 (510)
Q Consensus 406 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 468 (510)
|....++..+|.+|...|++++|..+|++++++ +|....++..++.+|.
T Consensus 547 ------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~--------~p~~~~~~~~l~~~~~ 595 (597)
T 2xpi_A 547 ------TNDANVHTAIALVYLHKKIPGLAITHLHESLAI--------SPNEIMASDLLKRALE 595 (597)
T ss_dssp ------SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHTTC
T ss_pred ------CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhc--------CCCChHHHHHHHHHHh
Confidence 445678999999999999999999999999985 4555667788887664
No 24
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.95 E-value=8.1e-25 Score=213.39 Aligned_cols=335 Identities=14% Similarity=0.070 Sum_probs=208.0
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCC-Cc
Q 010446 121 LFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKD-DE 199 (510)
Q Consensus 121 l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~-~~ 199 (510)
+...|..+...|++++|+++|++++++.+.... ....+..+.++.++|.+|..+|++++|+.++++++.+...... ..
T Consensus 54 yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~-~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~ 132 (472)
T 4g1t_A 54 CNLLAYLKHLKGQNEAALECLRKAEELIQQEHA-DQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYR 132 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSG-GGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCc-cccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccc
Confidence 445788899999999999999999999776532 2235667788999999999999999999999999998766432 23
Q ss_pred hHHHHHHHHHHHHHHh--hhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH---HhhcCCHHHHHHHHHHHHHH
Q 010446 200 PLLDAILLHMGSMYST--LENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKV---LGSIGRAKKAVEIYHRVITI 274 (510)
Q Consensus 200 ~~~~~~~~~l~~~~~~--~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~---~~~~g~~~~A~~~~~~al~~ 274 (510)
+..+.++..+|..+.. .+++++|+.+|++++++. ++++ .++..++.+ +...+++++|++.+++++++
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~-----p~~~---~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l 204 (472)
T 4g1t_A 133 IESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKK-----PKNP---EFTSGLAIASYRLDNWPPSQNAIDPLRQAIRL 204 (472)
T ss_dssp CCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS-----TTCH---HHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhC-----CCCH---HHHHHHHHHHHHhcCchHHHHHHHHHHHHhhc
Confidence 4455667778776655 468999999999999862 3333 344444444 33456667777777777665
Q ss_pred HHHhcCCCCcchHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHH
Q 010446 275 LELNRGTESADLVLPLFSLGSLFIK----EGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVE 350 (510)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 350 (510)
.|....++..+|..+.. .|++++|..++++++.. +|....++.++|.+|...|++++|+.
T Consensus 205 --------~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~--------~~~~~~~~~~lg~~~~~~~~~~~A~~ 268 (472)
T 4g1t_A 205 --------NPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEK--------APGVTDVLRSAAKFYRRKDEPDKAIE 268 (472)
T ss_dssp --------CSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHH--------CSSCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred --------CCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh--------CccHHHHHHHHHHHHHHcCchHHHHH
Confidence 23333344444433322 23445555555555443 22233444555555555555555555
Q ss_pred HHHHHHHHH----------------------------------------------HhhccCCCCChHHHHHHHHHHHHHH
Q 010446 351 LYKKALRVI----------------------------------------------KDSNYMSLDDSIMENMRIDLAELLH 384 (510)
Q Consensus 351 ~~~~al~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~la~~~~ 384 (510)
.++++++.. .+.....+.. ..++..+|.++.
T Consensus 269 ~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~~lg~~~~ 345 (472)
T 4g1t_A 269 LLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEANDNL---FRVCSILASLHA 345 (472)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHCTTT---CCCHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCch---hhhhhhHHHHHH
Confidence 555554431 1000001111 123467899999
Q ss_pred HcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHH-HHhccCHHHHHHHHHHHHHHHH-----------------
Q 010446 385 IVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAAS-YSRSKNFVEAERLLRICLDIMT----------------- 446 (510)
Q Consensus 385 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~al~~~~----------------- 446 (510)
..|++++|+.+|++++.+. +.+.....++..+|.+ +...|++++|+.+|++++.+..
T Consensus 346 ~~~~~~~A~~~~~kaL~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~~~~~~~~~l~~~~~ 420 (472)
T 4g1t_A 346 LADQYEEAEYYFQKEFSKE-----LTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSREKEKMKDKLQKIAK 420 (472)
T ss_dssp HTTCHHHHHHHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHhcC-----CCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHH
Confidence 9999999999999998752 2222333455666654 4578999999999999987521
Q ss_pred HHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 010446 447 KTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREI 489 (510)
Q Consensus 447 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 489 (510)
+.+ ..+|....++..+|.+|..+|++++|+++|++|+++...
T Consensus 421 ~~l-~~~p~~~~~~~~LG~~~~~~g~~~~A~~~y~kALe~~~~ 462 (472)
T 4g1t_A 421 MRL-SKNGADSEALHVLAFLQELNEKMQQADEDSERGLESGSL 462 (472)
T ss_dssp HHH-HHCC-CTTHHHHHHHHHHHHHHCC---------------
T ss_pred HHH-HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 111 124566778999999999999999999999999997644
No 25
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.95 E-value=3.1e-24 Score=201.11 Aligned_cols=295 Identities=13% Similarity=0.091 Sum_probs=241.0
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCC
Q 010446 119 LELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDD 198 (510)
Q Consensus 119 ~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 198 (510)
..+...+..+...|++++|+..++++++. .|....++..+|.++...|++++|+..+++++... +.
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~----~~ 103 (359)
T 3ieg_A 38 IAYYRRATVFLAMGKSKAALPDLTKVIAL----------KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSN----PS 103 (359)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSC----CC
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHh----------CCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcC----Cc
Confidence 34778899999999999999999999988 67777899999999999999999999999998764 10
Q ss_pred chHHHHHHHHH------------HHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHH
Q 010446 199 EPLLDAILLHM------------GSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVE 266 (510)
Q Consensus 199 ~~~~~~~~~~l------------~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 266 (510)
......++..+ |.++...|++++|+..++++++.. |....++..+|.++...|++++|+.
T Consensus 104 ~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~A~~ 175 (359)
T 3ieg_A 104 EQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVC--------VWDAELRELRAECFIKEGEPRKAIS 175 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------CCchHHHHHHHHHHHHCCCHHHHHH
Confidence 00333334444 799999999999999999998762 3446788999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHH---------HHHHHH
Q 010446 267 IYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMA---------MCSLAH 337 (510)
Q Consensus 267 ~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~---------~~~la~ 337 (510)
.++++++. .|....++..+|.++...|++++|+..++++++. .++++..... ...+|.
T Consensus 176 ~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~a~ 242 (359)
T 3ieg_A 176 DLKAASKL--------KSDNTEAFYKISTLYYQLGDHELSLSEVRECLKL-----DQDHKRCFAHYKQVKKLNKLIESAE 242 (359)
T ss_dssp HHHHHHTT--------CSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999875 4566789999999999999999999999999975 2344443222 335588
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHhhccCCCCC-hHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHH
Q 010446 338 AKCANGNAEEAVELYKKALRVIKDSNYMSLDD-SIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVT 416 (510)
Q Consensus 338 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 416 (510)
++...|++++|+..+++++.. .++. .....++..+|.++...|++++|+..+++++.. .|....
T Consensus 243 ~~~~~~~~~~A~~~~~~~~~~-------~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~ 307 (359)
T 3ieg_A 243 ELIRDGRYTDATSKYESVMKT-------EPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQM--------EPDNVN 307 (359)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH-------CCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHH
T ss_pred HHHHcCCHHHHHHHHHHHHhc-------CCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CcccHH
Confidence 999999999999999999987 2333 334456788999999999999999999999886 345567
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcC
Q 010446 417 HLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLN 471 (510)
Q Consensus 417 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 471 (510)
++..+|.++...|++++|+..|++++++ .|....+...++.++...+
T Consensus 308 ~~~~~~~~~~~~g~~~~A~~~~~~a~~~--------~p~~~~~~~~l~~~~~~~~ 354 (359)
T 3ieg_A 308 ALKDRAEAYLIEEMYDEAIQDYEAAQEH--------NENDQQIREGLEKAQRLLK 354 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCChHHHHHHHHHHHHHH
Confidence 8999999999999999999999999984 3444556666666655443
No 26
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.95 E-value=1.3e-24 Score=210.65 Aligned_cols=310 Identities=14% Similarity=0.092 Sum_probs=250.4
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCC
Q 010446 118 LLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKD 197 (510)
Q Consensus 118 ~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 197 (510)
...+...+..+...|++++|+..++++++. .|..+.++..+|.+|...|++++|+..+++++... +
T Consensus 60 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~----------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~----~ 125 (450)
T 2y4t_A 60 YIAYYRRATVFLAMGKSKAALPDLTKVIQL----------KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSN----P 125 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSC----C
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc----------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC----C
Confidence 344777889999999999999999999988 67778999999999999999999999999988753 2
Q ss_pred Cch---HHH---------HHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHH
Q 010446 198 DEP---LLD---------AILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAV 265 (510)
Q Consensus 198 ~~~---~~~---------~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 265 (510)
..+ ... ..+..+|.++...|++++|+..|+++++.. |....++..+|.+|...|++++|+
T Consensus 126 ~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~g~~~~A~ 197 (450)
T 2y4t_A 126 SENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVC--------VWDAELRELRAECFIKEGEPRKAI 197 (450)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCGGGGH
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCChHHHHHHHHHHHHCCCHHHHH
Confidence 222 111 113455888999999999999999998752 444678899999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHH---------HHHH
Q 010446 266 EIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAM---------CSLA 336 (510)
Q Consensus 266 ~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~---------~~la 336 (510)
.+++++++. .|....++..+|.+|...|++++|+..+++++.. .++++.....+ ..+|
T Consensus 198 ~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~~~~~~~~~~~~ 264 (450)
T 2y4t_A 198 SDLKAASKL--------KNDNTEAFYKISTLYYQLGDHELSLSEVRECLKL-----DQDHKRCFAHYKQVKKLNKLIESA 264 (450)
T ss_dssp HHHHHHHHH--------HCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCChHHHHHHHHHHHHHHHHHHHH
Confidence 999999987 3455788999999999999999999999999875 23444332222 4449
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCC-hHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHH
Q 010446 337 HAKCANGNAEEAVELYKKALRVIKDSNYMSLDD-SIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFV 415 (510)
Q Consensus 337 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 415 (510)
.++...|++++|+.+|++++.. .+++ ......+..+|.++...|++++|+.++++++.+ .|...
T Consensus 265 ~~~~~~g~~~~A~~~~~~~l~~-------~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~--------~p~~~ 329 (450)
T 2y4t_A 265 EELIRDGRYTDATSKYESVMKT-------EPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQM--------EPDNV 329 (450)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHH-------CCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCH
T ss_pred HHHHHcCCHHHHHHHHHHHHhc-------CCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CcccH
Confidence 9999999999999999999986 3333 333567899999999999999999999999875 34556
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHH------------HHHhcC-----ChHHHHH
Q 010446 416 THLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGI------------TLYHLN-----RDKEAEK 478 (510)
Q Consensus 416 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~------------~~~~~g-----~~~~A~~ 478 (510)
.++..+|.++...|++++|+..|++++++ .|....++..++. .|...| +.+++.+
T Consensus 330 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~~~~~~~~~y~~lg~~~~~~~~~~~~ 401 (450)
T 2y4t_A 330 NALKDRAEAYLIEEMYDEAIQDYETAQEH--------NENDQQIREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIK 401 (450)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------SSSCHHHHHHHHHHHHHHHHHHSCCSGGGSCSSTTCCTTHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CcchHHHHHHHHHHHHHhhcccchhHHHHhCCCccCCHHHHHH
Confidence 88999999999999999999999999984 3444556677773 344555 5567788
Q ss_pred HHHH-HHH
Q 010446 479 LVLE-ALY 485 (510)
Q Consensus 479 ~~~~-al~ 485 (510)
.|++ ++.
T Consensus 402 ~y~~~~l~ 409 (450)
T 2y4t_A 402 AYRKLALQ 409 (450)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 7776 444
No 27
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.95 E-value=9.4e-25 Score=200.43 Aligned_cols=283 Identities=21% Similarity=0.274 Sum_probs=232.4
Q ss_pred CCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcC-CCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHH
Q 010446 155 GNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLK-DDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVL 233 (510)
Q Consensus 155 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 233 (510)
+.+.|..+.++..+|.++...|++++|+.++++++.+..... .+.+....++..+|.++...|++++|+.++++++...
T Consensus 20 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 99 (311)
T 3nf1_A 20 GYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIR 99 (311)
T ss_dssp CTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 556888999999999999999999999999999998876542 3567788889999999999999999999999999999
Q ss_pred HHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 010446 234 ESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRI 313 (510)
Q Consensus 234 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 313 (510)
....+.+++....++..+|.++...|++++|+.++++++++.+...+.+++....++..+|.++...|++++|+.+++++
T Consensus 100 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 179 (311)
T 3nf1_A 100 EKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRA 179 (311)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 88877788889999999999999999999999999999999988877778888999999999999999999999999999
Q ss_pred HHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccC--CCC---ChHHHHHHHHHHHHHHHcCC
Q 010446 314 LKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYM--SLD---DSIMENMRIDLAELLHIVGR 388 (510)
Q Consensus 314 l~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~--~~~---~~~~~~~~~~la~~~~~~g~ 388 (510)
+.+.+...+++++....++..+|.++...|++++|+.+++++++........ .+. .......+..++..+...+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (311)
T 3nf1_A 180 LEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTS 259 (311)
T ss_dssp HHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CC
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHH
Confidence 9999888777889999999999999999999999999999999886543110 011 11122333445555566677
Q ss_pred hHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Q 010446 389 GQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIM 445 (510)
Q Consensus 389 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 445 (510)
+.+|...++++.. .++....++..+|.+|...|++++|+.+|++++++.
T Consensus 260 ~~~a~~~~~~~~~--------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 260 FGEYGGWYKACKV--------DSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp SCCCC-----------------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCC--------CCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 7777777776654 467788999999999999999999999999999874
No 28
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.94 E-value=1.6e-25 Score=207.34 Aligned_cols=279 Identities=13% Similarity=0.118 Sum_probs=234.1
Q ss_pred hhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcC
Q 010446 159 IEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYG 238 (510)
Q Consensus 159 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 238 (510)
+..+..+..+|..++..|++++|+..+++++... |....++..++.++...|++++|+..++++++.
T Consensus 19 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~-------p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------ 85 (330)
T 3hym_B 19 QENLDVVVSLAERHYYNCDFKMCYKLTSVVMEKD-------PFHASCLPVHIGTLVELNKANELFYLSHKLVDL------ 85 (330)
T ss_dssp -CCCTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------TTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHH------
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-------CCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHh------
Confidence 3445577889999999999999999999988764 222334677888999999999999999999885
Q ss_pred CCChhHHHHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q 010446 239 KTSILLVTSLLGMAKVLGSIG-RAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIY 317 (510)
Q Consensus 239 ~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 317 (510)
.|....++..+|.++...| ++++|+.+++++++. .|....++..+|.++...|++++|+..++++++..
T Consensus 86 --~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 155 (330)
T 3hym_B 86 --YPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTL--------EKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLM 155 (330)
T ss_dssp --CTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTT--------CTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHT
T ss_pred --CcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhc
Confidence 2344567899999999999 999999999999876 45567889999999999999999999999999863
Q ss_pred HHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHH
Q 010446 318 TKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLE 397 (510)
Q Consensus 318 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 397 (510)
|....++..+|.++...|++++|+.++++++.. .++. ..++..+|.++...|++++|+.+++
T Consensus 156 --------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-------~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~ 217 (330)
T 3hym_B 156 --------KGCHLPMLYIGLEYGLTNNSKLAERFFSQALSI-------APED---PFVMHEVGVVAFQNGEWKTAEKWFL 217 (330)
T ss_dssp --------TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-------CTTC---HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred --------cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh-------CCCC---hHHHHHHHHHHHHcccHHHHHHHHH
Confidence 223356777999999999999999999999876 2333 3567899999999999999999999
Q ss_pred HHHHHHHHhhCCCC-hhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHH
Q 010446 398 ECLLITEKYKGKEH-PSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEA 476 (510)
Q Consensus 398 ~al~~~~~~~~~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 476 (510)
+++........... +....++..+|.+|...|++++|+.++++++++ .|....++..+|.++...|++++|
T Consensus 218 ~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~--------~~~~~~~~~~la~~~~~~g~~~~A 289 (330)
T 3hym_B 218 DALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVL--------IPQNASTYSAIGYIHSLMGNFENA 289 (330)
T ss_dssp HHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCSHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh--------CccchHHHHHHHHHHHHhccHHHH
Confidence 99998765533222 445678899999999999999999999999985 345567889999999999999999
Q ss_pred HHHHHHHHHH
Q 010446 477 EKLVLEALYI 486 (510)
Q Consensus 477 ~~~~~~al~~ 486 (510)
..++++++++
T Consensus 290 ~~~~~~al~~ 299 (330)
T 3hym_B 290 VDYFHTALGL 299 (330)
T ss_dssp HHHHHTTTTT
T ss_pred HHHHHHHHcc
Confidence 9999999874
No 29
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.94 E-value=1.4e-23 Score=198.22 Aligned_cols=268 Identities=12% Similarity=0.107 Sum_probs=224.7
Q ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCC
Q 010446 162 VAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTS 241 (510)
Q Consensus 162 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 241 (510)
...++..|..+...|++++|+..+++++.+.... ++.+..+.+++.+|.+|...|++++|+.++++++++..... ...
T Consensus 101 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~-~~~ 178 (378)
T 3q15_A 101 YYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFV-SDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHP-LYS 178 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC-CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTST-TCH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhC-CChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCC-Cch
Confidence 3467788999999999999999999999988764 45577888999999999999999999999999999987641 113
Q ss_pred hhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHc
Q 010446 242 ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVY 321 (510)
Q Consensus 242 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 321 (510)
+..+.++.++|.+|...|++++|+.++++++++.++.. +.+..+.++.++|.+|...|++++|+.++++++++.+..
T Consensus 179 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~- 255 (378)
T 3q15_A 179 IRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQ--NDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK- 255 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH-
T ss_pred hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh-
Confidence 46788999999999999999999999999999987753 445667889999999999999999999999999998876
Q ss_pred CCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCC---hHHHHHHHHH
Q 010446 322 GENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGR---GQEGRELLEE 398 (510)
Q Consensus 322 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~---~~~A~~~~~~ 398 (510)
.+|....++.++|.++...|++++|..++++++++.... .++. ....+..++.++...|+ +.+|+.++++
T Consensus 256 --~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~----~~~~-~~~~~~~l~~ly~~~~~~~~~~~al~~~~~ 328 (378)
T 3q15_A 256 --VPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITAR----SHKF-YKELFLFLQAVYKETVDERKIHDLLSYFEK 328 (378)
T ss_dssp --CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTT----CCSC-HHHHHHHHHHHHSSSCCHHHHHHHHHHHHH
T ss_pred --CChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc----CCHH-HHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 456668899999999999999999999999999986542 2232 33355788889888888 5555555544
Q ss_pred HHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhC
Q 010446 399 CLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVG 450 (510)
Q Consensus 399 al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 450 (510)
. ...+.....+..+|.+|...|++++|..+|++++++.++...
T Consensus 329 -------~--~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~~~~ 371 (378)
T 3q15_A 329 -------K--NLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILK 371 (378)
T ss_dssp -------T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred -------C--CChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhc
Confidence 2 245667778889999999999999999999999998776543
No 30
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.94 E-value=4.9e-25 Score=207.58 Aligned_cols=281 Identities=16% Similarity=0.095 Sum_probs=233.5
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCch
Q 010446 121 LFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEP 200 (510)
Q Consensus 121 l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 200 (510)
++..+..+...|++++|+..++++++. .|..+.++..+|.++...|++++|+..+++++... |
T Consensus 67 ~~~~~~~~~~~g~~~~A~~~~~~al~~----------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-------~ 129 (368)
T 1fch_A 67 PFEEGLRRLQEGDLPNAVLLFEAAVQQ----------DPKHMEAWQYLGTTQAENEQELLAISALRRCLELK-------P 129 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHS----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------T
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHh----------CCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcC-------C
Confidence 667899999999999999999999987 67778899999999999999999999999998874 3
Q ss_pred HHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhH-------------HHHHHHHHHHHhhcCCHHHHHHH
Q 010446 201 LLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILL-------------VTSLLGMAKVLGSIGRAKKAVEI 267 (510)
Q Consensus 201 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~-------------~~~~~~la~~~~~~g~~~~A~~~ 267 (510)
....++..+|.++...|++++|+..+++++.... +.+.. ...+..++.++ ..|++++|+.+
T Consensus 130 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~ 203 (368)
T 1fch_A 130 DNQTALMALAVSFTNESLQRQACEILRDWLRYTP-----AYAHLVTPAEEGAGGAGLGPSKRILGSLL-SDSLFLEVKEL 203 (368)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTST-----TTGGGCC---------------CTTHHHH-HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-----CcHHHHHHHHHHhhhhcccHHHHHHHHHh-hcccHHHHHHH
Confidence 3345689999999999999999999999987532 22211 11122466666 89999999999
Q ss_pred HHHHHHHHHHhcCCCCcc--hHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCH
Q 010446 268 YHRVITILELNRGTESAD--LVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNA 345 (510)
Q Consensus 268 ~~~al~~~~~~~~~~~~~--~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 345 (510)
++++++. .|. ...++..+|.++...|++++|+.++++++.+ .|....++.++|.++...|++
T Consensus 204 ~~~a~~~--------~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~g~~ 267 (368)
T 1fch_A 204 FLAAVRL--------DPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSV--------RPNDYLLWNKLGATLANGNQS 267 (368)
T ss_dssp HHHHHHH--------STTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHh--------CcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CcCCHHHHHHHHHHHHHcCCH
Confidence 9999987 333 5788999999999999999999999999986 244457889999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhC---CCChhHHHHHHHHH
Q 010446 346 EEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKG---KEHPSFVTHLLNLA 422 (510)
Q Consensus 346 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~---~~~~~~~~~~~~la 422 (510)
++|+.++++++.. .++. ..++..+|.++...|++++|+.++++++.+.....+ ..++....++..+|
T Consensus 268 ~~A~~~~~~al~~-------~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~ 337 (368)
T 1fch_A 268 EEAVAAYRRALEL-------QPGY---IRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLR 337 (368)
T ss_dssp HHHHHHHHHHHHH-------CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHh-------CCCc---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHH
Confidence 9999999999987 2333 356789999999999999999999999998754321 12334478899999
Q ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHhC
Q 010446 423 ASYSRSKNFVEAERLLRICLDIMTKTVG 450 (510)
Q Consensus 423 ~~~~~~g~~~~A~~~~~~al~~~~~~~~ 450 (510)
.+|...|++++|...++++++...+.++
T Consensus 338 ~~~~~~g~~~~A~~~~~~~l~~~~~~~~ 365 (368)
T 1fch_A 338 LALSMLGQSDAYGAADARDLSTLLTMFG 365 (368)
T ss_dssp HHHHHHTCGGGHHHHHTTCHHHHHHHTT
T ss_pred HHHHHhCChHhHHHhHHHHHHHHHHhcC
Confidence 9999999999999999999998776654
No 31
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.94 E-value=1.9e-24 Score=210.76 Aligned_cols=310 Identities=11% Similarity=-0.007 Sum_probs=232.6
Q ss_pred cCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcC--CCchHHHHHHHH
Q 010446 131 MGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLK--DDEPLLDAILLH 208 (510)
Q Consensus 131 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 208 (510)
.++.+.++..+++.+....+ ..+.+..+..++.+|.++...|++++|+..|++++++..... ..++....++.+
T Consensus 24 l~~~~~~l~~~e~~~~~~~~----~~~~~~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~n 99 (472)
T 4g1t_A 24 LMEGENSLDDFEDKVFYRTE----FQNREFKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGN 99 (472)
T ss_dssp TTTTCCCHHHHHHHHHHHTT----SCC---CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----hCCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHH
Confidence 34555566656555443211 223444567889999999999999999999999998865532 234566777999
Q ss_pred HHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhc--CCHHHHHHHHHHHHHHHHHhcCCCCcch
Q 010446 209 MGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSI--GRAKKAVEIYHRVITILELNRGTESADL 286 (510)
Q Consensus 209 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~~~ 286 (510)
+|.+|..+|++++|+.++++++++.+...+..++..+.++.++|.++... +++++|+.+|++++++ .|..
T Consensus 100 la~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~--------~p~~ 171 (472)
T 4g1t_A 100 YAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEK--------KPKN 171 (472)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH--------STTC
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh--------CCCC
Confidence 99999999999999999999999998876666667778888888777665 5799999999999998 3455
Q ss_pred HHHHHHHHHHH---HHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH----HCCCHHHHHHHHHHHHHHH
Q 010446 287 VLPLFSLGSLF---IKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKC----ANGNAEEAVELYKKALRVI 359 (510)
Q Consensus 287 ~~~~~~la~~~---~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~----~~g~~~~A~~~~~~al~~~ 359 (510)
..++..+|.++ ...++.++|+..+++++++ +|....++.++|..+. ..|++++|..++++++..
T Consensus 172 ~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l--------~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~- 242 (472)
T 4g1t_A 172 PEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRL--------NPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEK- 242 (472)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHH--------CSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhc--------CCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh-
Confidence 56666666664 4568889999999999986 2333445566665554 456788999999999887
Q ss_pred HhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhcc----------
Q 010446 360 KDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSK---------- 429 (510)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g---------- 429 (510)
.++. ..++.++|.+|...|++++|+..++++++. +|....++..+|.+|...+
T Consensus 243 ------~~~~---~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~y~~~~~~~~~~~~~~ 305 (472)
T 4g1t_A 243 ------APGV---TDVLRSAAKFYRRKDEPDKAIELLKKALEY--------IPNNAYLHCQIGCCYRAKVFQVMNLRENG 305 (472)
T ss_dssp ------CSSC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHHHHHHHHC----
T ss_pred ------CccH---HHHHHHHHHHHHHcCchHHHHHHHHHHHHh--------CCChHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 3333 346688999999999999999999999875 4566778888998886542
Q ss_pred ---------CHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 010446 430 ---------NFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYI 486 (510)
Q Consensus 430 ---------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 486 (510)
.+++|+..+++++.+ +|....++..+|.++...|++++|+.+|++++++
T Consensus 306 ~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~ 363 (472)
T 4g1t_A 306 MYGKRKLLELIGHAVAHLKKADEA--------NDNLFRVCSILASLHALADQYEEAEYYFQKEFSK 363 (472)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHH--------CTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhhHHHHHHHHHHHhhc--------CCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhc
Confidence 345566666666553 4556677899999999999999999999999864
No 32
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.94 E-value=1.7e-24 Score=195.75 Aligned_cols=271 Identities=20% Similarity=0.195 Sum_probs=227.8
Q ss_pred HHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHH
Q 010446 213 YSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFS 292 (510)
Q Consensus 213 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 292 (510)
....|++++|+.+|++++++..+..+.+++....++..+|.++...|++++|+.++++++++.++..+++++....++..
T Consensus 11 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 90 (283)
T 3edt_B 11 SSGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNN 90 (283)
T ss_dssp --CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHH
Confidence 35679999999999999999999888888999999999999999999999999999999999998877788999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHH
Q 010446 293 LGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIM 372 (510)
Q Consensus 293 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 372 (510)
+|.++...|++++|+.++++++.+.++..+++++....++.++|.++...|++++|+.++++++.+.... .+++++..
T Consensus 91 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~ 168 (283)
T 3edt_B 91 LAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR--LGPDDPNV 168 (283)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH--SCTTCHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--cCCCCHHH
Confidence 9999999999999999999999999998888889999999999999999999999999999999997764 45667778
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhh-CCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCC
Q 010446 373 ENMRIDLAELLHIVGRGQEGRELLEECLLITEKYK-GKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGP 451 (510)
Q Consensus 373 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 451 (510)
..++.++|.++...|++++|+.++++++.+..... +...+.....+..++..+...+....+.. +.++....+ ..+.
T Consensus 169 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~ 246 (283)
T 3edt_B 169 AKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAP-YGEYGSWYK-ACKV 246 (283)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC--------------CCCC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHH-HHHHHHHHH-hcCC
Confidence 88999999999999999999999999999865542 23344555567777777776666555544 444444333 3345
Q ss_pred CChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 010446 452 DDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 487 (510)
Q Consensus 452 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 487 (510)
.++....++..+|.+|..+|++++|..++++++++.
T Consensus 247 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 247 DSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRNR 282 (283)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Confidence 678889999999999999999999999999998753
No 33
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.94 E-value=1.5e-24 Score=200.65 Aligned_cols=287 Identities=14% Similarity=0.090 Sum_probs=232.7
Q ss_pred hHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCC
Q 010446 160 EEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGK 239 (510)
Q Consensus 160 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 239 (510)
.....+..+|..+...|++++|+..+++++... |....++..+|.++...|++++|+.+++++++..
T Consensus 19 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~------ 85 (327)
T 3cv0_A 19 MYHENPMEEGLSMLKLANLAEAALAFEAVCQAA-------PEREEAWRSLGLTQAENEKDGLAIIALNHARMLD------ 85 (327)
T ss_dssp GGSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------
T ss_pred hhhHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC------
Confidence 455678899999999999999999999998764 3344568899999999999999999999999862
Q ss_pred CChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHH--------------HH-HHHHcCChH
Q 010446 240 TSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSL--------------GS-LFIKEGKAV 304 (510)
Q Consensus 240 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l--------------a~-~~~~~g~~~ 304 (510)
|....++..+|.++...|++++|+..++++++.. |.....+..+ +. ++...|+++
T Consensus 86 --~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (327)
T 3cv0_A 86 --PKDIAVHAALAVSHTNEHNANAALASLRAWLLSQ--------PQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYR 155 (327)
T ss_dssp --TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS--------TTTTTC--------------------CCTTSHHHHH
T ss_pred --cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHH
Confidence 3446788999999999999999999999998762 2223333333 54 588899999
Q ss_pred HHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHH
Q 010446 305 DAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLH 384 (510)
Q Consensus 305 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~ 384 (510)
+|+.+++++++. .|....++..+|.++...|++++|+.+++++++. .++. ..++..+|.++.
T Consensus 156 ~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-------~~~~---~~~~~~l~~~~~ 217 (327)
T 3cv0_A 156 ECRTLLHAALEM--------NPNDAQLHASLGVLYNLSNNYDSAAANLRRAVEL-------RPDD---AQLWNKLGATLA 217 (327)
T ss_dssp HHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------CTTC---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh--------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh-------CCCc---HHHHHHHHHHHH
Confidence 999999999875 2334578899999999999999999999999987 2333 346789999999
Q ss_pred HcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCC----ChhhHHHH
Q 010446 385 IVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPD----DQSISFPM 460 (510)
Q Consensus 385 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~----~~~~~~~~ 460 (510)
..|++++|+.++++++.. .|....++..+|.+|...|++++|+.++++++.+.....+.. ......++
T Consensus 218 ~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 289 (327)
T 3cv0_A 218 NGNRPQEALDAYNRALDI--------NPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMW 289 (327)
T ss_dssp HTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHH
Confidence 999999999999999875 244567888999999999999999999999998643211111 11156788
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHhcCCCC
Q 010446 461 LHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDS 495 (510)
Q Consensus 461 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 495 (510)
..+|.++...|++++|...++++++.....++-++
T Consensus 290 ~~l~~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~ 324 (327)
T 3cv0_A 290 DFFRMLLNVMNRPDLVELTYAQNVEPFAKEFGLQS 324 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHTTCCSHHHHHHTTSSC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHhcchhhhHHH
Confidence 99999999999999999999999999988776554
No 34
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.93 E-value=5.7e-24 Score=192.22 Aligned_cols=270 Identities=20% Similarity=0.224 Sum_probs=223.8
Q ss_pred HHhhCChHHHHHHHHHHHHhhhhc-CCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 010446 172 YVYIGDLKFVQSLLDMMSGIVDSL-KDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLG 250 (510)
Q Consensus 172 ~~~~g~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 250 (510)
....|++++|+.++++++.+.... +.++|....++..+|.++...|++++|+.++++++++.....+++++....++..
T Consensus 11 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 90 (283)
T 3edt_B 11 SSGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNN 90 (283)
T ss_dssp --CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHH
Confidence 346899999999999999987664 3456888899999999999999999999999999999998888888999999999
Q ss_pred HHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHH
Q 010446 251 MAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGM 330 (510)
Q Consensus 251 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 330 (510)
+|.++...|++++|+.++++++++.++..+++++....++.++|.++...|++++|+.++++++++.+...+++++....
T Consensus 91 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 170 (283)
T 3edt_B 91 LAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAK 170 (283)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHH
Confidence 99999999999999999999999999888888889999999999999999999999999999999999888888899999
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCC
Q 010446 331 AMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKE 410 (510)
Q Consensus 331 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 410 (510)
++.++|.++...|++++|+.++++++....... .+...+.....+..++..+...+....+.. +.++....... +..
T Consensus 171 ~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~ 247 (283)
T 3edt_B 171 TKNNLASCYLKQGKYQDAETLYKEILTRAHEKE-FGSVNGDNKPIWMHAEEREESKDKRRDSAP-YGEYGSWYKAC-KVD 247 (283)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH-SSSCCSSCCCHHHHHHHHHHTTCCCCC-------------CC-CCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc-CCCcchhHHHHHHHHHHHHhcCCchhHHHH-HHHHHHHHHhc-CCC
Confidence 999999999999999999999999999876542 112222223345666777666666555544 44444443333 456
Q ss_pred ChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Q 010446 411 HPSFVTHLLNLAASYSRSKNFVEAERLLRICLDI 444 (510)
Q Consensus 411 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 444 (510)
++....++..+|.+|...|++++|..++++++++
T Consensus 248 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 281 (283)
T 3edt_B 248 SPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRN 281 (283)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 7888899999999999999999999999999874
No 35
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.93 E-value=3.9e-24 Score=197.77 Aligned_cols=279 Identities=11% Similarity=0.023 Sum_probs=229.1
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCch
Q 010446 121 LFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEP 200 (510)
Q Consensus 121 l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 200 (510)
++..+..+...|++++|+.+++++++. .|..+.++..+|.++...|++++|+..+++++... |
T Consensus 24 ~~~~a~~~~~~~~~~~A~~~~~~~~~~----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-------~ 86 (327)
T 3cv0_A 24 PMEEGLSMLKLANLAEAALAFEAVCQA----------APEREEAWRSLGLTQAENEKDGLAIIALNHARMLD-------P 86 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------T
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHh----------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-------c
Confidence 567889999999999999999999987 67778899999999999999999999999998874 3
Q ss_pred HHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH--------------HH-HHhhcCCHHHHH
Q 010446 201 LLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGM--------------AK-VLGSIGRAKKAV 265 (510)
Q Consensus 201 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l--------------a~-~~~~~g~~~~A~ 265 (510)
....++..+|.++...|++++|+..+++++.... ... ..+..+ +. ++...|++++|+
T Consensus 87 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~ 158 (327)
T 3cv0_A 87 KDIAVHAALAVSHTNEHNANAALASLRAWLLSQP-----QYE---QLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECR 158 (327)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTST-----TTT---TC--------------------CCTTSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----ccH---HHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHH
Confidence 3345688999999999999999999999987532 111 122222 44 588899999999
Q ss_pred HHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCH
Q 010446 266 EIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNA 345 (510)
Q Consensus 266 ~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 345 (510)
.+++++++. .|....++..+|.++...|++++|+.+++++++. .|....++..+|.++...|++
T Consensus 159 ~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~ 222 (327)
T 3cv0_A 159 TLLHAALEM--------NPNDAQLHASLGVLYNLSNNYDSAAANLRRAVEL--------RPDDAQLWNKLGATLANGNRP 222 (327)
T ss_dssp HHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHhh--------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcCCH
Confidence 999999987 3456788999999999999999999999999985 244457789999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCC----hhHHHHHHHH
Q 010446 346 EEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEH----PSFVTHLLNL 421 (510)
Q Consensus 346 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~----~~~~~~~~~l 421 (510)
++|+.+++++++. .++. ..++..+|.++...|++++|+.++++++.......+... .....++..+
T Consensus 223 ~~A~~~~~~a~~~-------~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l 292 (327)
T 3cv0_A 223 QEALDAYNRALDI-------NPGY---VRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFF 292 (327)
T ss_dssp HHHHHHHHHHHHH-------CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-------CCCC---HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHH
Confidence 9999999999987 2333 346788999999999999999999999987643211111 1157789999
Q ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHHhC
Q 010446 422 AASYSRSKNFVEAERLLRICLDIMTKTVG 450 (510)
Q Consensus 422 a~~~~~~g~~~~A~~~~~~al~~~~~~~~ 450 (510)
|.++...|++++|...++++++...+..+
T Consensus 293 ~~~~~~~g~~~~A~~~~~~~l~~~~~~~~ 321 (327)
T 3cv0_A 293 RMLLNVMNRPDLVELTYAQNVEPFAKEFG 321 (327)
T ss_dssp HHHHHHTTCHHHHHHHTTCCSHHHHHHTT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHhcchhhh
Confidence 99999999999999999999988776544
No 36
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.93 E-value=1.2e-22 Score=191.67 Aligned_cols=312 Identities=12% Similarity=0.051 Sum_probs=248.7
Q ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCC
Q 010446 161 EVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKT 240 (510)
Q Consensus 161 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 240 (510)
...++..+|.++...|++++|...+++++.... ..+......++..+|.++...|++++|..++++++.+.... .+
T Consensus 13 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~--~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~ 88 (373)
T 1hz4_A 13 HAEFNALRAQVAINDGNPDEAERLAKLALEELP--PGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQH--DV 88 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCC--TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TC
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCC--CCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhc--Cc
Confidence 456778889999999999999999999988652 12223355678899999999999999999999999988764 23
Q ss_pred ChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Q 010446 241 SILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKV 320 (510)
Q Consensus 241 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 320 (510)
......++.++|.++...|++++|+.++++++++.+...+..++....++.++|.++...|++++|..++++++.+....
T Consensus 89 ~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 168 (373)
T 1hz4_A 89 WHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSY 168 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcc
Confidence 33556778999999999999999999999999998877655456778889999999999999999999999999886543
Q ss_pred cCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCCh-HHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 010446 321 YGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDS-IMENMRIDLAELLHIVGRGQEGRELLEEC 399 (510)
Q Consensus 321 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~a 399 (510)
.++....++.++|.++...|++++|..++++++.+.... ..+. ........++.++...|++++|..+++++
T Consensus 169 ---~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a 241 (373)
T 1hz4_A 169 ---QPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNG----KYHSDWISNANKVRVIYWQMTGDKAAAANWLRHT 241 (373)
T ss_dssp ---CGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred ---CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc----CcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhC
Confidence 223355788899999999999999999999999886542 1121 12222224566688999999999999987
Q ss_pred HHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHH
Q 010446 400 LLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKL 479 (510)
Q Consensus 400 l~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 479 (510)
+... ..........+..+|.++...|++++|...+++++...... +..+....++..+|.++...|++++|...
T Consensus 242 ~~~~----~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 315 (373)
T 1hz4_A 242 AKPE----FANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSL--RLMSDLNRNLLLLNQLYWQAGRKSDAQRV 315 (373)
T ss_dssp CCCC----CTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CCCC----CCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC--cchhhHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 6532 11112223456789999999999999999999999987663 22334556888999999999999999999
Q ss_pred HHHHHHHHHH
Q 010446 480 VLEALYIREI 489 (510)
Q Consensus 480 ~~~al~~~~~ 489 (510)
+++++.+...
T Consensus 316 l~~al~~~~~ 325 (373)
T 1hz4_A 316 LLDALKLANR 325 (373)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhcc
Confidence 9999998874
No 37
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.93 E-value=6.4e-22 Score=186.56 Aligned_cols=310 Identities=12% Similarity=0.048 Sum_probs=244.3
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCC
Q 010446 118 LLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKD 197 (510)
Q Consensus 118 ~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 197 (510)
.......+..+...|++++|+.++++++... ...+......++..+|.++...|++++|...+++++.+....+
T Consensus 14 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~- 87 (373)
T 1hz4_A 14 AEFNALRAQVAINDGNPDEAERLAKLALEEL-----PPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHD- 87 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC-----CTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHcC-----CCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcC-
Confidence 3445667788899999999999999998762 1111223556788999999999999999999999999887643
Q ss_pred CchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH
Q 010446 198 DEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILEL 277 (510)
Q Consensus 198 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 277 (510)
+......++..+|.++...|++++|+.++++++.......+..++....++.++|.++...|++++|..++++++++...
T Consensus 88 ~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 88 VWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred cHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 33445666889999999999999999999999999887655445677888999999999999999999999999988654
Q ss_pred hcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChH--HHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q 010446 278 NRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGR--VGMAMCSLAHAKCANGNAEEAVELYKKA 355 (510)
Q Consensus 278 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~--~~~~~~~la~~~~~~g~~~~A~~~~~~a 355 (510)
.. ++....++..+|.++...|++++|..++++++.+.... ..+. ........+.++...|++++|..+++++
T Consensus 168 ~~---~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a 241 (373)
T 1hz4_A 168 YQ---PQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNG---KYHSDWISNANKVRVIYWQMTGDKAAAANWLRHT 241 (373)
T ss_dssp SC---GGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS---CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred cC---cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc---CcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhC
Confidence 32 23356788899999999999999999999999875432 2222 1122224556688999999999999988
Q ss_pred HHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHH
Q 010446 356 LRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAE 435 (510)
Q Consensus 356 l~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 435 (510)
+... ..........+..+|.++...|++++|...+++++....... ..+....++..+|.++...|++++|.
T Consensus 242 ~~~~------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~ 313 (373)
T 1hz4_A 242 AKPE------FANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLR--LMSDLNRNLLLLNQLYWQAGRKSDAQ 313 (373)
T ss_dssp CCCC------CTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCC------CCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCc--chhhHHHHHHHHHHHHHHhCCHHHHH
Confidence 7531 111122223567899999999999999999999999877642 23344568889999999999999999
Q ss_pred HHHHHHHHHHHH
Q 010446 436 RLLRICLDIMTK 447 (510)
Q Consensus 436 ~~~~~al~~~~~ 447 (510)
..+++++.+...
T Consensus 314 ~~l~~al~~~~~ 325 (373)
T 1hz4_A 314 RVLLDALKLANR 325 (373)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc
Confidence 999999998765
No 38
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.92 E-value=4.5e-23 Score=204.53 Aligned_cols=312 Identities=17% Similarity=0.168 Sum_probs=236.9
Q ss_pred HHHHHHHHHHcC-------ChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhh
Q 010446 121 LFNEVKSMIMMG-------NKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVD 193 (510)
Q Consensus 121 l~~~~~~~~~~g-------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~ 193 (510)
....+..+...| ++++|+..|++++.. .|..+.++..+|.++...|++++|+..+++++...
T Consensus 21 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~----------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~- 89 (537)
T 3fp2_A 21 RQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIEL----------DPNEPVFYSNISACYISTGDLEKVIEFTTKALEIK- 89 (537)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHH----------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh----------CCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-
Confidence 344566677777 478899999999887 77778999999999999999999999999998764
Q ss_pred hcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHH------------------------HhcCC----------
Q 010446 194 SLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLE------------------------SRYGK---------- 239 (510)
Q Consensus 194 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~------------------------~~~~~---------- 239 (510)
|....++..+|.++...|++++|+..|+ ++.... .....
T Consensus 90 ------p~~~~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~ 162 (537)
T 3fp2_A 90 ------PDHSKALLRRASANESLGNFTDAMFDLS-VLSLNGDFDGASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLP 162 (537)
T ss_dssp ------TTCHHHHHHHHHHHHHHTCHHHHHHHHH-HHC-----------CHHHHHHHHHHHHHHHHHCC-------CCCC
T ss_pred ------CchHHHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccc
Confidence 3345568999999999999999999995 443211 11000
Q ss_pred --------------------------CChhHHHHHHHHHHHHh--------hcCCHHHHHHHHHHHHHHHHHhcCCCCcc
Q 010446 240 --------------------------TSILLVTSLLGMAKVLG--------SIGRAKKAVEIYHRVITILELNRGTESAD 285 (510)
Q Consensus 240 --------------------------~~~~~~~~~~~la~~~~--------~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 285 (510)
..+........++..+. ..|++++|+..++++++. .++++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~-----~p~~~~ 237 (537)
T 3fp2_A 163 SNTSLASFFGIFDSHLEVSSVNTSSNYDTAYALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSA-----NTVDDP 237 (537)
T ss_dssp CHHHHHHHHHTSCHHHHHHTSCCCCSSCSSHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC-------CCCHH
T ss_pred hHhHHHHHHHhcChHHHHHHHhhccccccHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHH-----CCCcch
Confidence 00000112222333322 223555555555555543 122222
Q ss_pred ----hHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 010446 286 ----LVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKD 361 (510)
Q Consensus 286 ----~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 361 (510)
.+.++..+|.++...|++++|+..+++++.. .|. ..++..+|.++...|++++|+.++++++..
T Consensus 238 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~--------~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--- 305 (537)
T 3fp2_A 238 LRENAALALCYTGIFHFLKNNLLDAQVLLQESINL--------HPT-PNSYIFLALTLADKENSQEFFKFFQKAVDL--- 305 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHH---
T ss_pred hhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhc--------CCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhcc---
Confidence 3557889999999999999999999999985 233 578889999999999999999999999987
Q ss_pred hccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHH
Q 010446 362 SNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRIC 441 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 441 (510)
.++. ..++..+|.++...|++++|+..+++++... |....++..+|.++...|++++|+.+++++
T Consensus 306 ----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 370 (537)
T 3fp2_A 306 ----NPEY---PPTYYHRGQMYFILQDYKNAKEDFQKAQSLN--------PENVYPYIQLACLLYKQGKFTESEAFFNET 370 (537)
T ss_dssp ----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ----CCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3333 3467899999999999999999999998852 334467889999999999999999999999
Q ss_pred HHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHh
Q 010446 442 LDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIA 490 (510)
Q Consensus 442 l~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 490 (510)
++. .|....++..+|.++...|++++|+.+|++++++....
T Consensus 371 ~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 411 (537)
T 3fp2_A 371 KLK--------FPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQ 411 (537)
T ss_dssp HHH--------CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHh--------CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcc
Confidence 985 34556778999999999999999999999999988653
No 39
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.1e-21 Score=172.82 Aligned_cols=254 Identities=11% Similarity=0.015 Sum_probs=211.9
Q ss_pred hhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcC
Q 010446 159 IEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYG 238 (510)
Q Consensus 159 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 238 (510)
+..+..+..+|.++...|++++|+.++++++... .. ..++..+|.++...|++++|+.++++++++.... .
T Consensus 2 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-----~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-~ 72 (258)
T 3uq3_A 2 GSMADKEKAEGNKFYKARQFDEAIEHYNKAWELH-----KD---ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREM-R 72 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----CC---THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-T
T ss_pred chHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-----cc---HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc-c
Confidence 3457789999999999999999999999998874 22 2458899999999999999999999999987653 2
Q ss_pred CCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 010446 239 KTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYT 318 (510)
Q Consensus 239 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 318 (510)
++.+....++..+|.++...|++++|+.++++++.+. +. +.++...|++++|+..+++++.
T Consensus 73 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--------~~--------~~~~~~~~~~~~a~~~~~~~~~--- 133 (258)
T 3uq3_A 73 ADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEH--------RT--------ADILTKLRNAEKELKKAEAEAY--- 133 (258)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------CC--------HHHHHHHHHHHHHHHHHHHHHH---
T ss_pred cchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcC--------ch--------hHHHHHHhHHHHHHHHHHHHHH---
Confidence 2334457899999999999999999999999999872 21 4567788889999999999887
Q ss_pred HHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 010446 319 KVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEE 398 (510)
Q Consensus 319 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 398 (510)
..|....++..+|.++...|++++|+.++++++.. .++. ..++..+|.++...|++++|+.++++
T Consensus 134 -----~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~-------~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~ 198 (258)
T 3uq3_A 134 -----VNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKR-------APED---ARGYSNRAAALAKLMSFPEAIADCNK 198 (258)
T ss_dssp -----CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -----cCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-------Cccc---HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 36778889999999999999999999999999987 2333 35678999999999999999999999
Q ss_pred HHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHH
Q 010446 399 CLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGI 465 (510)
Q Consensus 399 al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 465 (510)
++.. .|....++..+|.++...|++++|..++++++++..+.. ..|....++..++.
T Consensus 199 al~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~--~~p~~~~~~~~l~~ 255 (258)
T 3uq3_A 199 AIEK--------DPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYK 255 (258)
T ss_dssp HHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHH
T ss_pred HHHh--------CHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhc--CCCchHHHHHHHHH
Confidence 9885 244567899999999999999999999999999875543 23444555555544
No 40
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=6.3e-22 Score=176.22 Aligned_cols=253 Identities=14% Similarity=0.087 Sum_probs=213.3
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcC
Q 010446 117 QLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLK 196 (510)
Q Consensus 117 ~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 196 (510)
....+...|..+...|++++|+.+++++++. . ..+.++..+|.++...|++++|+..+++++.......
T Consensus 4 ~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~----------~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 72 (258)
T 3uq3_A 4 MADKEKAEGNKFYKARQFDEAIEHYNKAWEL----------H-KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMR 72 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------S-CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHh----------h-ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccc
Confidence 3455788999999999999999999999987 3 4467899999999999999999999999999886655
Q ss_pred CCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 010446 197 DDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILE 276 (510)
Q Consensus 197 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 276 (510)
++.+....++..+|.++...|++++|+.++++++.+. +. +.++...|++++|+..+++++..
T Consensus 73 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-----~~-----------~~~~~~~~~~~~a~~~~~~~~~~-- 134 (258)
T 3uq3_A 73 ADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEH-----RT-----------ADILTKLRNAEKELKKAEAEAYV-- 134 (258)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----CC-----------HHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred cchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcC-----ch-----------hHHHHHHhHHHHHHHHHHHHHHc--
Confidence 5555667889999999999999999999999999862 11 45677788999999999999875
Q ss_pred HhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 010446 277 LNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKAL 356 (510)
Q Consensus 277 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 356 (510)
.|....++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+.++++++
T Consensus 135 ------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al 200 (258)
T 3uq3_A 135 ------NPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKR--------APEDARGYSNRAAALAKLMSFPEAIADCNKAI 200 (258)
T ss_dssp ------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ------CcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 5667889999999999999999999999999985 23445788999999999999999999999999
Q ss_pred HHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHH
Q 010446 357 RVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAAS 424 (510)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~ 424 (510)
+. .++. ..++..+|.++...|++++|+.++++++++..+.. ..|....++..++.+
T Consensus 201 ~~-------~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~--~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 201 EK-------DPNF---VRAYIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYKA 256 (258)
T ss_dssp HH-------CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHHT
T ss_pred Hh-------CHHH---HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhc--CCCchHHHHHHHHHh
Confidence 87 2333 45678999999999999999999999999876653 334555555555543
No 41
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.91 E-value=6.3e-23 Score=184.39 Aligned_cols=261 Identities=12% Similarity=0.032 Sum_probs=209.0
Q ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCC
Q 010446 162 VAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTS 241 (510)
Q Consensus 162 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 241 (510)
+..+...|.++...|++++|+..+++++... +.. ..++..+|.++...|++++|+..++++++. ..+.
T Consensus 3 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~----p~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~ 70 (272)
T 3u4t_A 3 DDVEFRYADFLFKNNNYAEAIEVFNKLEAKK----YNS---PYIYNRRAVCYYELAKYDLAQKDIETYFSK-----VNAT 70 (272)
T ss_dssp --CHHHHHHHHHTTTCHHHHHHHHHHHHHTT----CCC---STTHHHHHHHHHHTTCHHHHHHHHHHHHTT-----SCTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC----CCc---HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-----cCch
Confidence 3467889999999999999999999998764 222 235789999999999999999999999872 1233
Q ss_pred hhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHc
Q 010446 242 ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVY 321 (510)
Q Consensus 242 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 321 (510)
.....++..+|.++...|++++|+.+++++++. .|....++..+|.+|...|++++|+.+++++++.
T Consensus 71 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~----- 137 (272)
T 3u4t_A 71 KAKSADFEYYGKILMKKGQDSLAIQQYQAAVDR--------DTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP----- 137 (272)
T ss_dssp TCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS-----
T ss_pred hHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhc--------CcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc-----
Confidence 344778999999999999999999999999997 4556788999999999999999999999999874
Q ss_pred CCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCC---hHHHHHHHHH
Q 010446 322 GENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGR---GQEGRELLEE 398 (510)
Q Consensus 322 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~---~~~A~~~~~~ 398 (510)
.|....++.++|......+++++|+..++++++. .++. ...+..+|.++...|+ +++|+..+++
T Consensus 138 ---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-------~p~~---~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 204 (272)
T 3u4t_A 138 ---TTTDPKVFYELGQAYYYNKEYVKADSSFVKVLEL-------KPNI---YIGYLWRARANAAQDPDTKQGLAKPYYEK 204 (272)
T ss_dssp ---SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------STTC---HHHHHHHHHHHHHHSTTCSSCTTHHHHHH
T ss_pred ---CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------Cccc---hHHHHHHHHHHHHcCcchhhHHHHHHHHH
Confidence 4555678889995555567999999999999987 2333 4566889999999999 9999999999
Q ss_pred HHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHH
Q 010446 399 CLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLY 468 (510)
Q Consensus 399 al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 468 (510)
++++......+.......++..+|.+|...|++++|+.++++++++ +|....+...++.+..
T Consensus 205 a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~a~~~l~~~~~ 266 (272)
T 3u4t_A 205 LIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILAL--------DPTNKKAIDGLKMKLE 266 (272)
T ss_dssp HHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHC----
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CccHHHHHHHhhhhhc
Confidence 9998765432212335578999999999999999999999999985 3444455555554443
No 42
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.91 E-value=2.4e-22 Score=187.33 Aligned_cols=255 Identities=11% Similarity=-0.023 Sum_probs=216.6
Q ss_pred ChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHh
Q 010446 158 GIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLEN-YEKSMLVYQRVINVLESR 236 (510)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~A~~~~~~al~~~~~~ 236 (510)
.|..+.++..+|.++...|++++|+..+++++.+. |....+++.+|.++...|+ +++|+..|++++.+
T Consensus 93 ~p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~-------P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l---- 161 (382)
T 2h6f_A 93 SDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELN-------AANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEE---- 161 (382)
T ss_dssp CHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH----
T ss_pred ChhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhC-------ccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHH----
Confidence 78889999999999999999999999999999875 5556679999999999997 99999999999986
Q ss_pred cCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 237 YGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKI 316 (510)
Q Consensus 237 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 316 (510)
+|....++.++|.++...|++++|+..|++++++ .|....++.++|.++...|++++|+.++++++++
T Consensus 162 ----~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~l--------dP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l 229 (382)
T 2h6f_A 162 ----QPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQ--------DAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKE 229 (382)
T ss_dssp ----CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Confidence 3556789999999999999999999999999998 6777899999999999999999999999999996
Q ss_pred HHHHcCCCChHHHHHHHHHHHHHHH-CCCHHHH-----HHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcC--C
Q 010446 317 YTKVYGENDGRVGMAMCSLAHAKCA-NGNAEEA-----VELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVG--R 388 (510)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A-----~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g--~ 388 (510)
+|....+++++|.++.. .|..++| +.+|++++.+ .|++ ..++.+++.++...| +
T Consensus 230 --------~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l-------~P~~---~~a~~~l~~ll~~~g~~~ 291 (382)
T 2h6f_A 230 --------DVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKL-------VPHN---ESAWNYLKGILQDRGLSK 291 (382)
T ss_dssp --------CTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHH-------STTC---HHHHHHHHHHHTTTCGGG
T ss_pred --------CCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH-------CCCC---HHHHHHHHHHHHccCccc
Confidence 46667899999999999 6665777 5889999987 3444 457789999999988 6
Q ss_pred hHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhcc--------C-HHHHHHHHHHH-HHHHHHHhCCCChhhHH
Q 010446 389 GQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSK--------N-FVEAERLLRIC-LDIMTKTVGPDDQSISF 458 (510)
Q Consensus 389 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g--------~-~~~A~~~~~~a-l~~~~~~~~~~~~~~~~ 458 (510)
+++|++.++++ + ..+....++..+|.+|..+| + +++|+.+|+++ ++ .+|....
T Consensus 292 ~~~a~~~~~~~-~--------~~p~~~~al~~La~~~~~~~~~~~~~~~~~~~~A~~~~~~l~~~--------~DP~r~~ 354 (382)
T 2h6f_A 292 YPNLLNQLLDL-Q--------PSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKE--------KDTIRKE 354 (382)
T ss_dssp CHHHHHHHHHH-T--------TTCCCHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHT--------TCGGGHH
T ss_pred hHHHHHHHHHh-c--------cCCCCHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHH--------hCchhHH
Confidence 89998887664 1 34566778889999999885 2 58888888887 55 3677778
Q ss_pred HHHHHHHHHHhc
Q 010446 459 PMLHLGITLYHL 470 (510)
Q Consensus 459 ~~~~la~~~~~~ 470 (510)
.|..++..+..+
T Consensus 355 ~w~~~~~~l~~~ 366 (382)
T 2h6f_A 355 YWRYIGRSLQSK 366 (382)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888887776654
No 43
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.90 E-value=1.9e-22 Score=181.19 Aligned_cols=259 Identities=13% Similarity=0.100 Sum_probs=210.6
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCc
Q 010446 120 ELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDE 199 (510)
Q Consensus 120 ~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 199 (510)
.++..|..++..|++++|+..++++++. .|..+.++..+|.++...|++++|+..+++++.. +++.
T Consensus 5 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~----------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~----~~~~ 70 (272)
T 3u4t_A 5 VEFRYADFLFKNNNYAEAIEVFNKLEAK----------KYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSK----VNAT 70 (272)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHHHT----------TCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTT----SCTT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHh----------CCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc----cCch
Confidence 3677899999999999999999999987 5566678999999999999999999999999873 2333
Q ss_pred hHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhc
Q 010446 200 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNR 279 (510)
Q Consensus 200 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 279 (510)
.....++..+|.++...|++++|+.+|+++++.. |....++..+|.+|...|++++|+.+++++++.
T Consensus 71 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~----- 137 (272)
T 3u4t_A 71 KAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRD--------TTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP----- 137 (272)
T ss_dssp TCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------TTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS-----
T ss_pred hHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcC--------cccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc-----
Confidence 3346668999999999999999999999999862 334568999999999999999999999999875
Q ss_pred CCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHH
Q 010446 280 GTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGN---AEEAVELYKKAL 356 (510)
Q Consensus 280 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~---~~~A~~~~~~al 356 (510)
.|....++..+|......+++++|+..++++++. .|....++..+|.++...|+ +++|+..+++++
T Consensus 138 ---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 206 (272)
T 3u4t_A 138 ---TTTDPKVFYELGQAYYYNKEYVKADSSFVKVLEL--------KPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLI 206 (272)
T ss_dssp ---SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHH
T ss_pred ---CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHcCcchhhHHHHHHHHHHH
Confidence 5667889999995555566999999999999986 23445788889999999998 999999999999
Q ss_pred HHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHH
Q 010446 357 RVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYS 426 (510)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 426 (510)
+....... ++......++..+|.++...|++++|+.++++++.+. |....+...++.+..
T Consensus 207 ~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~--------p~~~~a~~~l~~~~~ 266 (272)
T 3u4t_A 207 EVCAPGGA--KYKDELIEANEYIAYYYTINRDKVKADAAWKNILALD--------PTNKKAIDGLKMKLE 266 (272)
T ss_dssp HHHGGGGG--GGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHC----
T ss_pred HHHhcccc--cchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--------ccHHHHHHHhhhhhc
Confidence 99765311 1123355788999999999999999999999999862 444455555555443
No 44
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.90 E-value=7.9e-22 Score=183.81 Aligned_cols=235 Identities=9% Similarity=-0.015 Sum_probs=201.5
Q ss_pred CchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCC-HHHHHHHHHHHHHHHH
Q 010446 198 DEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGR-AKKAVEIYHRVITILE 276 (510)
Q Consensus 198 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-~~~A~~~~~~al~~~~ 276 (510)
..|....++..+|.++...|++++|+..|++++.+ +|....++.++|.++...|+ +++|+..+++++++
T Consensus 92 ~~p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l--------~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l-- 161 (382)
T 2h6f_A 92 YSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIEL--------NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEE-- 161 (382)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH--
T ss_pred CChhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHh--------CccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHH--
Confidence 34778888999999999999999999999999986 35667899999999999997 99999999999998
Q ss_pred HhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 010446 277 LNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKAL 356 (510)
Q Consensus 277 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 356 (510)
.|....+++++|.++...|++++|+..|++++++ +|....++.++|.++...|++++|+.++++++
T Consensus 162 ------~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~l--------dP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al 227 (382)
T 2h6f_A 162 ------QPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQ--------DAKNYHAWQHRQWVIQEFKLWDNELQYVDQLL 227 (382)
T ss_dssp ------CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHH
T ss_pred ------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CccCHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 6777899999999999999999999999999986 46667899999999999999999999999999
Q ss_pred HHHHhhccCCCCChHHHHHHHHHHHHHHH-cCChHHH-----HHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhcc-
Q 010446 357 RVIKDSNYMSLDDSIMENMRIDLAELLHI-VGRGQEG-----RELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSK- 429 (510)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A-----~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g- 429 (510)
++ .++. ..++.++|.++.. .|..++| +.+|++++.+ .|....++.++|.++...|
T Consensus 228 ~l-------~P~~---~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l--------~P~~~~a~~~l~~ll~~~g~ 289 (382)
T 2h6f_A 228 KE-------DVRN---NSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKL--------VPHNESAWNYLKGILQDRGL 289 (382)
T ss_dssp HH-------CTTC---HHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHTTTCG
T ss_pred Hh-------CCCC---HHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHccCc
Confidence 98 3333 4577999999999 5665888 5889998885 3566789999999999988
Q ss_pred -CHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcC--------C-hHHHHHHHHHH
Q 010446 430 -NFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLN--------R-DKEAEKLVLEA 483 (510)
Q Consensus 430 -~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g--------~-~~~A~~~~~~a 483 (510)
++++|++.++++ + ..|....++..+|.+|..+| + +++|+.+|+++
T Consensus 290 ~~~~~a~~~~~~~-~--------~~p~~~~al~~La~~~~~~~~~~~~~~~~~~~~A~~~~~~l 344 (382)
T 2h6f_A 290 SKYPNLLNQLLDL-Q--------PSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEIL 344 (382)
T ss_dssp GGCHHHHHHHHHH-T--------TTCCCHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHh-c--------cCCCCHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH
Confidence 689998877664 2 34666778899999999985 2 47777777776
No 45
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.89 E-value=4.8e-22 Score=171.63 Aligned_cols=197 Identities=17% Similarity=0.119 Sum_probs=162.3
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCC
Q 010446 245 VTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEN 324 (510)
Q Consensus 245 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 324 (510)
..++..+|.++...|++++|+..++++++. .|....++..+|.++...|++++|+..+++++++
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~-------- 68 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKE--------NPQDPEALYWLARTQLKLGLVNPALENGKTLVAR-------- 68 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------SSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------
Confidence 457889999999999999999999999986 6777899999999999999999999999999986
Q ss_pred ChHHHHHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHH
Q 010446 325 DGRVGMAMCSLAHAKCAN-----------GNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGR 393 (510)
Q Consensus 325 ~~~~~~~~~~la~~~~~~-----------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 393 (510)
.|....++.++|.++... |++++|+..+++++++ .|+. ..++.++|.++...|++++|+
T Consensus 69 ~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-------~P~~---~~~~~~lg~~~~~~g~~~~A~ 138 (217)
T 2pl2_A 69 TPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERV-------NPRY---APLHLQRGLVYALLGERDKAE 138 (217)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH-------CTTC---HHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHh-------Cccc---HHHHHHHHHHHHHcCChHHHH
Confidence 355667889999999999 9999999999999998 3444 356789999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCCh
Q 010446 394 ELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRD 473 (510)
Q Consensus 394 ~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 473 (510)
..|++++++. ....++.++|.+|...|++++|+..|++++++ +|....++..+|.++...|++
T Consensus 139 ~~~~~al~~~---------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~--------~P~~~~~~~~la~~~~~~g~~ 201 (217)
T 2pl2_A 139 ASLKQALALE---------DTPEIRSALAELYLSMGRLDEALAQYAKALEQ--------APKDLDLRVRYASALLLKGKA 201 (217)
T ss_dssp HHHHHHHHHC---------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHTC----
T ss_pred HHHHHHHhcc---------cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHccCH
Confidence 9999999862 34567889999999999999999999999985 466677889999999999999
Q ss_pred HHHHHHHHHHH
Q 010446 474 KEAEKLVLEAL 484 (510)
Q Consensus 474 ~~A~~~~~~al 484 (510)
++|+..|+++-
T Consensus 202 ~~A~~~~~~~~ 212 (217)
T 2pl2_A 202 EEAARAAALEH 212 (217)
T ss_dssp -----------
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 46
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.89 E-value=6.7e-22 Score=170.70 Aligned_cols=200 Identities=14% Similarity=0.129 Sum_probs=161.5
Q ss_pred hhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcC
Q 010446 159 IEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYG 238 (510)
Q Consensus 159 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 238 (510)
|..+.++..+|.++...|++++|+..+++++... |....++..+|.++...|++++|+..|++++++
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-------p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~------ 68 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKEN-------PQDPEALYWLARTQLKLGLVNPALENGKTLVAR------ 68 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS-------SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------
Confidence 3445688999999999999999999999998764 445566899999999999999999999999986
Q ss_pred CCChhHHHHHHHHHHHHhhc-----------CCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHH
Q 010446 239 KTSILLVTSLLGMAKVLGSI-----------GRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAE 307 (510)
Q Consensus 239 ~~~~~~~~~~~~la~~~~~~-----------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 307 (510)
.|....++.++|.++... |++++|+..+++++++ .|....++.++|.++...|++++|+
T Consensus 69 --~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--------~P~~~~~~~~lg~~~~~~g~~~~A~ 138 (217)
T 2pl2_A 69 --TPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERV--------NPRYAPLHLQRGLVYALLGERDKAE 138 (217)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred --CCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHcCChHHHH
Confidence 355577899999999999 9999999999999998 5667889999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcC
Q 010446 308 SVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVG 387 (510)
Q Consensus 308 ~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g 387 (510)
..|++++++. ....++.++|.++...|++++|+..|+++++. .|+. ..++.++|.++...|
T Consensus 139 ~~~~~al~~~---------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~-------~P~~---~~~~~~la~~~~~~g 199 (217)
T 2pl2_A 139 ASLKQALALE---------DTPEIRSALAELYLSMGRLDEALAQYAKALEQ-------APKD---LDLRVRYASALLLKG 199 (217)
T ss_dssp HHHHHHHHHC---------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-------STTC---HHHHHHHHHHHTC--
T ss_pred HHHHHHHhcc---------cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCCC---hHHHHHHHHHHHHcc
Confidence 9999999972 33567889999999999999999999999987 3444 346689999999999
Q ss_pred ChHHHHHHHHHHH
Q 010446 388 RGQEGRELLEECL 400 (510)
Q Consensus 388 ~~~~A~~~~~~al 400 (510)
++++|+..++++-
T Consensus 200 ~~~~A~~~~~~~~ 212 (217)
T 2pl2_A 200 KAEEAARAAALEH 212 (217)
T ss_dssp -------------
T ss_pred CHHHHHHHHHHHh
Confidence 9999999998753
No 47
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.89 E-value=9.7e-20 Score=178.00 Aligned_cols=284 Identities=14% Similarity=0.098 Sum_probs=203.7
Q ss_pred HHHHHHHHHH----cCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh----hCChHHHHHHHHHHHHhh
Q 010446 121 LFNEVKSMIM----MGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVY----IGDLKFVQSLLDMMSGIV 192 (510)
Q Consensus 121 l~~~~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~~~~~~ 192 (510)
.+..+..+.. .+++++|+.+|+++.+. ..+.++..+|.+|.. .+++++|+.+|+++...
T Consensus 114 ~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~------------~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~- 180 (490)
T 2xm6_A 114 QQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ------------GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ- 180 (490)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT------------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC------------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-
Confidence 3445555555 56666666666666532 234566667777665 66677777777666542
Q ss_pred hhcCCCchHHHHHHHHHHHHHHh----hhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhh----cCCHHHH
Q 010446 193 DSLKDDEPLLDAILLHMGSMYST----LENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGS----IGRAKKA 264 (510)
Q Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A 264 (510)
.+ ..+++.+|.+|.. .+++++|+.+|+++.+. + ...++..+|.+|.. .+++++|
T Consensus 181 -----~~---~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~-------~---~~~a~~~lg~~y~~g~g~~~~~~~A 242 (490)
T 2xm6_A 181 -----GN---VWSCNQLGYMYSRGLGVERNDAISAQWYRKSATS-------G---DELGQLHLADMYYFGIGVTQDYTQS 242 (490)
T ss_dssp -----TC---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHTSSSCCCHHHH
T ss_pred -----CC---HHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHC-------C---CHHHHHHHHHHHHcCCCCCCCHHHH
Confidence 11 2345667777766 67777777777776642 1 13456677777775 6777777
Q ss_pred HHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH
Q 010446 265 VEIYHRVITILELNRGTESADLVLPLFSLGSLFIK----EGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKC 340 (510)
Q Consensus 265 ~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 340 (510)
+.+++++.+. ....++..+|.+|.. .+++++|+.+|+++.+. ++ ..++..+|.+|.
T Consensus 243 ~~~~~~a~~~----------~~~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~-------~~---~~a~~~Lg~~y~ 302 (490)
T 2xm6_A 243 RVLFSQSAEQ----------GNSIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQ-------GN---SDGQYYLAHLYD 302 (490)
T ss_dssp HHHHHHHHTT----------TCHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHTT-------TC---HHHHHHHHHHHH
T ss_pred HHHHHHHHHC----------CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHc-------CC---HHHHHHHHHHHH
Confidence 7777777643 124567788888887 78888888888887652 22 346778888888
Q ss_pred HC-----CCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcC---ChHHHHHHHHHHHHHHHHhhCCCCh
Q 010446 341 AN-----GNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVG---RGQEGRELLEECLLITEKYKGKEHP 412 (510)
Q Consensus 341 ~~-----g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~ 412 (510)
.. +++++|+.+|+++.+. + + ..++.++|.+|...| ++++|+.+|+++.+.
T Consensus 303 ~~~~g~~~~~~~A~~~~~~a~~~-------~--~---~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~---------- 360 (490)
T 2xm6_A 303 KGAEGVAKNREQAISWYTKSAEQ-------G--D---ATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK---------- 360 (490)
T ss_dssp HCBTTBCCCHHHHHHHHHHHHHT-------T--C---HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT----------
T ss_pred cCCCCCcCCHHHHHHHHHHHHhc-------C--C---HHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC----------
Confidence 87 8899999999888764 1 1 245688999998876 788999999988763
Q ss_pred hHHHHHHHHHHHHHh----ccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHh----cCChHHHHHHHHHHH
Q 010446 413 SFVTHLLNLAASYSR----SKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYH----LNRDKEAEKLVLEAL 484 (510)
Q Consensus 413 ~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al 484 (510)
....++..+|.+|.. .+++++|+.+|+++.+. . ...++.++|.+|.. .+++++|..+|++++
T Consensus 361 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~-------~---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~ 430 (490)
T 2xm6_A 361 GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ-------G---LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTAS 430 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC-------C---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 234688899999999 89999999999999872 2 24678999999998 899999999999999
Q ss_pred HHH
Q 010446 485 YIR 487 (510)
Q Consensus 485 ~~~ 487 (510)
+..
T Consensus 431 ~~~ 433 (490)
T 2xm6_A 431 TND 433 (490)
T ss_dssp HHH
T ss_pred HCC
Confidence 876
No 48
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.88 E-value=6.4e-20 Score=165.48 Aligned_cols=281 Identities=13% Similarity=0.046 Sum_probs=213.9
Q ss_pred HHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhH-HHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHH
Q 010446 124 EVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEE-VAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLL 202 (510)
Q Consensus 124 ~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~ 202 (510)
.++..+..|+|.+|+..+++.... .|+. ......++.+|...|++++|+..++. .+.| .
T Consensus 5 ~~~~~~~~g~y~~ai~~~~~~~~~----------~p~~~~e~~~~l~r~yi~~g~~~~al~~~~~---------~~~~-~ 64 (291)
T 3mkr_A 5 DVKNAFYIGSYQQCINEAQRVKPS----------SPERDVERDVFLYRAYLAQRKYGVVLDEIKP---------SSAP-E 64 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCCC----------SHHHHHHHHHHHHHHHHHTTCHHHHHHHSCT---------TSCH-H
T ss_pred HHHHHHHHHHHHHHHHHHHhcccC----------CchhhHHHHHHHHHHHHHCCCHHHHHHHhcc---------cCCh-h
Confidence 456778999999999988865332 4554 45778889999999999999876543 1223 4
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCC
Q 010446 203 DAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTE 282 (510)
Q Consensus 203 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 282 (510)
..++..++..+...|++++|+..+++.+.. ..+|....++..+|.++...|++++|+..+++
T Consensus 65 ~~a~~~la~~~~~~~~~~~A~~~l~~ll~~------~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~------------ 126 (291)
T 3mkr_A 65 LQAVRMFAEYLASHSRRDAIVAELDREMSR------SVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ------------ 126 (291)
T ss_dssp HHHHHHHHHHHHCSTTHHHHHHHHHHHHHS------CCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT------------
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHHHHHHhc------ccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC------------
Confidence 566888999999999999999999988752 11355567889999999999999999999886
Q ss_pred CcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Q 010446 283 SADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDS 362 (510)
Q Consensus 283 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 362 (510)
+....++..+|.++..+|++++|+..++++++.. +++.. .........++...|++++|+..|+++++.
T Consensus 127 -~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~-----p~~~~-~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~---- 195 (291)
T 3mkr_A 127 -GDSLECMAMTVQILLKLDRLDLARKELKKMQDQD-----EDATL-TQLATAWVSLAAGGEKLQDAYYIFQEMADK---- 195 (291)
T ss_dssp -CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCHH-HHHHHHHHHHHHCTTHHHHHHHHHHHHHHH----
T ss_pred -CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC-----cCcHH-HHHHHHHHHHHhCchHHHHHHHHHHHHHHh----
Confidence 2346788999999999999999999999998862 33321 111111223344569999999999999987
Q ss_pred ccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHH-HHHHHHHH
Q 010446 363 NYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVE-AERLLRIC 441 (510)
Q Consensus 363 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~-A~~~~~~a 441 (510)
.|+. ..++.++|.++...|++++|+..+++++.. .|....++.++|.++...|++++ +..+++++
T Consensus 196 ---~p~~---~~~~~~la~~~~~~g~~~eA~~~l~~al~~--------~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~ 261 (291)
T 3mkr_A 196 ---CSPT---LLLLNGQAACHMAQGRWEAAEGVLQEALDK--------DSGHPETLINLVVLSQHLGKPPEVTNRYLSQL 261 (291)
T ss_dssp ---SCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred ---CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 2333 446789999999999999999999999985 35666789999999999999976 57899999
Q ss_pred HHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHH
Q 010446 442 LDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKL 479 (510)
Q Consensus 442 l~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 479 (510)
+++ .|++|.+.. ...+.+.++++..-
T Consensus 262 ~~~-----~P~~~~~~d-------~~~~~~~fd~~~~~ 287 (291)
T 3mkr_A 262 KDA-----HRSHPFIKE-------YRAKENDFDRLVLQ 287 (291)
T ss_dssp HHH-----CTTCHHHHH-------HHHHHHHHHHHHHH
T ss_pred HHh-----CCCChHHHH-------HHHHHHHHHHHHHH
Confidence 885 466655443 23444445554443
No 49
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.88 E-value=1.7e-19 Score=176.23 Aligned_cols=284 Identities=14% Similarity=0.059 Sum_probs=235.9
Q ss_pred HHHHHHHHHHHH----cCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh----hCChHHHHHHHHHHHH
Q 010446 119 LELFNEVKSMIM----MGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVY----IGDLKFVQSLLDMMSG 190 (510)
Q Consensus 119 ~~l~~~~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~~~~ 190 (510)
...+..+..+.. .+++++|+.+|+++.+. ..+.++..+|.+|.. .+++++|+.+|+++..
T Consensus 76 ~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~------------~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 143 (490)
T 2xm6_A 76 PAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK------------GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAE 143 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT------------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC------------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 346678888888 89999999999998753 245778899999998 8899999999999865
Q ss_pred hhhhcCCCchHHHHHHHHHHHHHHh----hhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhh----cCCHH
Q 010446 191 IVDSLKDDEPLLDAILLHMGSMYST----LENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGS----IGRAK 262 (510)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~ 262 (510)
. .. ..+++.+|.+|.. .+++++|+.+|+++.+. ....++..+|.+|.. .++++
T Consensus 144 ~------~~---~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~----------~~~~a~~~Lg~~y~~g~g~~~~~~ 204 (490)
T 2xm6_A 144 Q------GR---DSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ----------GNVWSCNQLGYMYSRGLGVERNDA 204 (490)
T ss_dssp T------TC---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----------TCHHHHHHHHHHHHHTSSSCCCHH
T ss_pred C------CC---HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC----------CCHHHHHHHHHHHhcCCCCCcCHH
Confidence 3 11 3457899999987 88999999999999863 125688899999998 89999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHH
Q 010446 263 KAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIK----EGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHA 338 (510)
Q Consensus 263 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~ 338 (510)
+|+.+|+++.+. ....++..+|.+|.. .+++++|+.+|+++++. .+ ..++.++|.+
T Consensus 205 ~A~~~~~~a~~~----------~~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~-------~~---~~a~~~lg~~ 264 (490)
T 2xm6_A 205 ISAQWYRKSATS----------GDELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQ-------GN---SIAQFRLGYI 264 (490)
T ss_dssp HHHHHHHHHHHT----------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTT-------TC---HHHHHHHHHH
T ss_pred HHHHHHHHHHHC----------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------CC---HHHHHHHHHH
Confidence 999999999864 135678899999997 89999999999999763 22 3577889999
Q ss_pred HHH----CCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHHHHHhhCC
Q 010446 339 KCA----NGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIV-----GRGQEGRELLEECLLITEKYKGK 409 (510)
Q Consensus 339 ~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----g~~~~A~~~~~~al~~~~~~~~~ 409 (510)
|.. .+++++|+.+|+++.+. .+ ..++..+|.+|... +++++|+.+|+++.+.
T Consensus 265 y~~g~~~~~d~~~A~~~~~~a~~~---------~~---~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~------- 325 (490)
T 2xm6_A 265 LEQGLAGAKEPLKALEWYRKSAEQ---------GN---SDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQ------- 325 (490)
T ss_dssp HHHTTTSSCCHHHHHHHHHHHHTT---------TC---HHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHT-------
T ss_pred HHCCCCCCCCHHHHHHHHHHHHHc---------CC---HHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhc-------
Confidence 998 99999999999998753 12 23568899999998 9999999999998763
Q ss_pred CChhHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHh----cCChHHHHHHHHH
Q 010446 410 EHPSFVTHLLNLAASYSRSK---NFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYH----LNRDKEAEKLVLE 482 (510)
Q Consensus 410 ~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~ 482 (510)
. ...++..+|.+|...| ++++|+.+|+++.+. . ...++..+|.+|.. .+++++|..+|++
T Consensus 326 ~---~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~-------~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~ 392 (490)
T 2xm6_A 326 G---DATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK-------G---EKAAQFNLGNALLQGKGVKKDEQQAAIWMRK 392 (490)
T ss_dssp T---CHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHH
T ss_pred C---CHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC-------C---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 1 2357889999999866 899999999999872 2 34678999999999 8999999999999
Q ss_pred HHH
Q 010446 483 ALY 485 (510)
Q Consensus 483 al~ 485 (510)
+.+
T Consensus 393 A~~ 395 (490)
T 2xm6_A 393 AAE 395 (490)
T ss_dssp HHH
T ss_pred HHh
Confidence 987
No 50
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.87 E-value=1.9e-19 Score=162.37 Aligned_cols=261 Identities=15% Similarity=0.081 Sum_probs=205.2
Q ss_pred HHHhhCChHHHHHHHHHHHHhhhhcCCCchHH-HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHH
Q 010446 171 GYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLL-DAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLL 249 (510)
Q Consensus 171 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 249 (510)
..+..|+|..|+..++++.. ..|.. ......++.+|...|++++|+..++. ..+....++.
T Consensus 8 ~~~~~g~y~~ai~~~~~~~~-------~~p~~~~e~~~~l~r~yi~~g~~~~al~~~~~-----------~~~~~~~a~~ 69 (291)
T 3mkr_A 8 NAFYIGSYQQCINEAQRVKP-------SSPERDVERDVFLYRAYLAQRKYGVVLDEIKP-----------SSAPELQAVR 69 (291)
T ss_dssp HHHHTTCHHHHHHHHHHSCC-------CSHHHHHHHHHHHHHHHHHTTCHHHHHHHSCT-----------TSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccc-------CCchhhHHHHHHHHHHHHHCCCHHHHHHHhcc-----------cCChhHHHHH
Confidence 45678999999998876532 22443 34567789999999999999976543 1234567888
Q ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHH
Q 010446 250 GMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVG 329 (510)
Q Consensus 250 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 329 (510)
.++..+...|++++|++.+++.+.. ...|....++..+|.++...|++++|+..+++ |...
T Consensus 70 ~la~~~~~~~~~~~A~~~l~~ll~~------~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-------------~~~~ 130 (291)
T 3mkr_A 70 MFAEYLASHSRRDAIVAELDREMSR------SVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ-------------GDSL 130 (291)
T ss_dssp HHHHHHHCSTTHHHHHHHHHHHHHS------CCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-------------CCSH
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHhc------ccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-------------CCCH
Confidence 9999999999999999999988753 01466778899999999999999999999886 2234
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCC
Q 010446 330 MAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGK 409 (510)
Q Consensus 330 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 409 (510)
.++..+|.++...|++++|+..++++++. .++.... .....+..++...|++++|+..|++++..
T Consensus 131 ~~~~~l~~~~~~~g~~~~A~~~l~~~~~~-------~p~~~~~-~l~~a~~~l~~~~~~~~eA~~~~~~~l~~------- 195 (291)
T 3mkr_A 131 ECMAMTVQILLKLDRLDLARKELKKMQDQ-------DEDATLT-QLATAWVSLAAGGEKLQDAYYIFQEMADK------- 195 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------CTTCHHH-HHHHHHHHHHHCTTHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhh-------CcCcHHH-HHHHHHHHHHhCchHHHHHHHHHHHHHHh-------
Confidence 57888999999999999999999999987 3443221 11112234444568999999999999875
Q ss_pred CChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHH-HHHHHHHHHHHHH
Q 010446 410 EHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKE-AEKLVLEALYIRE 488 (510)
Q Consensus 410 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~-A~~~~~~al~~~~ 488 (510)
.|....+++++|.++...|++++|+..|++++.. +|....++.++|.++...|++.+ +..++++++++.
T Consensus 196 -~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~--------~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~- 265 (291)
T 3mkr_A 196 -CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDK--------DSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAH- 265 (291)
T ss_dssp -SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC-
T ss_pred -CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhC-
Confidence 3455678999999999999999999999999985 46667788999999999999976 568889988754
Q ss_pred HhcCCCCcc
Q 010446 489 IAFGKDSLP 497 (510)
Q Consensus 489 ~~~~~~~~~ 497 (510)
|+|+.
T Consensus 266 ----P~~~~ 270 (291)
T 3mkr_A 266 ----RSHPF 270 (291)
T ss_dssp ----TTCHH
T ss_pred ----CCChH
Confidence 66643
No 51
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.86 E-value=2.3e-19 Score=161.15 Aligned_cols=223 Identities=15% Similarity=0.172 Sum_probs=193.3
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhh----cCCHHHHHHHHHHHHHHHHH
Q 010446 202 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGS----IGRAKKAVEIYHRVITILEL 277 (510)
Q Consensus 202 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~ 277 (510)
...+++.+|.++...|++++|+.+|+++++. + ...++..+|.+|.. .+++++|+.+++++++.
T Consensus 5 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~-------~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--- 71 (273)
T 1ouv_A 5 DPKELVGLGAKSYKEKDFTQAKKYFEKACDL-------K---ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL--- 71 (273)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT---
T ss_pred ChHHHHHHHHHHHhCCCHHHHHHHHHHHHHC-------C---CHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC---
Confidence 3456899999999999999999999999871 2 24678899999999 99999999999999875
Q ss_pred hcCCCCcchHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH----CCCHHHHH
Q 010446 278 NRGTESADLVLPLFSLGSLFIK----EGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA----NGNAEEAV 349 (510)
Q Consensus 278 ~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~ 349 (510)
+ ...++..+|.+|.. .+++++|+.+|+++++. + ...++.++|.+|.. .+++++|+
T Consensus 72 ----~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~-------~---~~~a~~~lg~~~~~~~~~~~~~~~A~ 134 (273)
T 1ouv_A 72 ----N---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL-------K---YAEGCASLGGIYHDGKVVTRDFKKAV 134 (273)
T ss_dssp ----T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred ----C---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc-------C---CccHHHHHHHHHHcCCCcccCHHHHH
Confidence 1 46788999999999 99999999999999874 2 34678999999999 99999999
Q ss_pred HHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHH
Q 010446 350 ELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHI----VGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASY 425 (510)
Q Consensus 350 ~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 425 (510)
.+|+++++. + + ..++.++|.++.. .+++++|+.+|+++++. . ...++..+|.+|
T Consensus 135 ~~~~~a~~~-------~--~---~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~-------~---~~~a~~~lg~~~ 192 (273)
T 1ouv_A 135 EYFTKACDL-------N--D---GDGCTILGSLYDAGRGTPKDLKKALASYDKACDL-------K---DSPGCFNAGNMY 192 (273)
T ss_dssp HHHHHHHHT-------T--C---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHH
T ss_pred HHHHHHHhc-------C--c---HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------C---CHHHHHHHHHHH
Confidence 999999875 1 1 3466889999999 99999999999999864 1 246788999999
Q ss_pred Hh----ccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHh----cCChHHHHHHHHHHHHH
Q 010446 426 SR----SKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYH----LNRDKEAEKLVLEALYI 486 (510)
Q Consensus 426 ~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 486 (510)
.. .+++++|+.+|+++++. .+ ..++..+|.+|.. .+++++|..+|++++++
T Consensus 193 ~~g~~~~~~~~~A~~~~~~a~~~-------~~---~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~ 251 (273)
T 1ouv_A 193 HHGEGATKNFKEALARYSKACEL-------EN---GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKL 251 (273)
T ss_dssp HHTCSSCCCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHH
T ss_pred HcCCCCCccHHHHHHHHHHHHhC-------CC---HHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHc
Confidence 99 99999999999999983 12 4678999999999 99999999999999885
No 52
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.86 E-value=8.4e-20 Score=165.36 Aligned_cols=225 Identities=12% Similarity=0.077 Sum_probs=173.6
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcc
Q 010446 206 LLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESAD 285 (510)
Q Consensus 206 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 285 (510)
+...|.+|...|++++|+..|++++++.... .+.+..+.++.++|.+|...|++++|+.++++++++..... +...
T Consensus 40 ~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g--~~~~ 115 (292)
T 1qqe_A 40 CVQAATIYRLRKELNLAGDSFLKAADYQKKA--GNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRG--QFRR 115 (292)
T ss_dssp HHHHHHHHHHTTCTHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcC--CHHH
Confidence 3344667888999999999999999998764 23446688999999999999999999999999999987653 3344
Q ss_pred hHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Q 010446 286 LVLPLFSLGSLFIKE-GKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNY 364 (510)
Q Consensus 286 ~~~~~~~la~~~~~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 364 (510)
.+.++.++|.+|... |++++|+.+|++++++..... .......++.++|.++...|++++|+.+|++++.+...
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~--~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~--- 190 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ--SVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMG--- 190 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSS---
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCC--ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc---
Confidence 567899999999996 999999999999999986541 22334678999999999999999999999999987432
Q ss_pred CCCCC-hHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHH--hccCHHHHHHHHHHH
Q 010446 365 MSLDD-SIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYS--RSKNFVEAERLLRIC 441 (510)
Q Consensus 365 ~~~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~--~~g~~~~A~~~~~~a 441 (510)
.+.. ......+.++|.++...|++++|+.+|++++.+..... .......+..++..+. ..+++++|+..|+++
T Consensus 191 -~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~---~~~~~~~l~~l~~~~~~~~~~~~~~A~~~~~~~ 266 (292)
T 1qqe_A 191 -NRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFA---DSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNF 266 (292)
T ss_dssp -CTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC------------HHHHHHHHHHHHTTCTTTHHHHHHHHTTS
T ss_pred -CCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC---CcHHHHHHHHHHHHHHcCCHHHHHHHHHHhccC
Confidence 1111 13445778999999999999999999999987654331 1112234556666665 467788888888766
Q ss_pred HH
Q 010446 442 LD 443 (510)
Q Consensus 442 l~ 443 (510)
+.
T Consensus 267 ~~ 268 (292)
T 1qqe_A 267 MR 268 (292)
T ss_dssp SC
T ss_pred Cc
Confidence 54
No 53
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.86 E-value=1.1e-19 Score=163.28 Aligned_cols=256 Identities=11% Similarity=0.035 Sum_probs=199.4
Q ss_pred HHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 010446 171 GYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLG 250 (510)
Q Consensus 171 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 250 (510)
.....|++++|+..+++++... ....|....++..+|.++...|++++|+.+|+++++.. |....++..
T Consensus 14 ~~~~~~~~~~A~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~--------~~~~~~~~~ 82 (275)
T 1xnf_A 14 PLQPTLQQEVILARMEQILASR---ALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIR--------PDMPEVFNY 82 (275)
T ss_dssp CCCCCHHHHHHHHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------CCCHHHHHH
T ss_pred ccCccchHHHHHHHHHHHHhcc---cccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcC--------CCcHHHHHH
Confidence 3445688999999999988763 23456778889999999999999999999999999862 344678999
Q ss_pred HHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHH
Q 010446 251 MAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGM 330 (510)
Q Consensus 251 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 330 (510)
+|.++...|++++|+.++++++++ .|....++..+|.++...|++++|+.++++++++. ++++ .
T Consensus 83 la~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~-----~~~~---~ 146 (275)
T 1xnf_A 83 LGIYLTQAGNFDAAYEAFDSVLEL--------DPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD-----PNDP---F 146 (275)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH--------CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCH---H
T ss_pred HHHHHHHccCHHHHHHHHHHHHhc--------CccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-----CCCh---H
Confidence 999999999999999999999987 44557889999999999999999999999999852 3333 2
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCC
Q 010446 331 AMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKE 410 (510)
Q Consensus 331 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 410 (510)
....++ ++...|++++|+..+++++... ++.... ..++.++...++.++|+..+++++......
T Consensus 147 ~~~~~~-~~~~~~~~~~A~~~~~~~~~~~-------~~~~~~----~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~---- 210 (275)
T 1xnf_A 147 RSLWLY-LAEQKLDEKQAKEVLKQHFEKS-------DKEQWG----WNIVEFYLGNISEQTLMERLKADATDNTSL---- 210 (275)
T ss_dssp HHHHHH-HHHHHHCHHHHHHHHHHHHHHS-------CCCSTH----HHHHHHHTTSSCHHHHHHHHHHHCCSHHHH----
T ss_pred HHHHHH-HHHHhcCHHHHHHHHHHHHhcC-------CcchHH----HHHHHHHHHhcCHHHHHHHHHHHhcccccc----
Confidence 222222 3466699999999999988762 222222 357888888999999999999887654332
Q ss_pred ChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHH
Q 010446 411 HPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLV 480 (510)
Q Consensus 411 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 480 (510)
.+....++..+|.+|...|++++|+.+|++++.+ .|... ...+.++...|++++|++.+
T Consensus 211 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~--------~p~~~---~~~~~~~~~l~~~~~a~~~~ 269 (275)
T 1xnf_A 211 AEHLSETNFYLGKYYLSLGDLDSATALFKLAVAN--------NVHNF---VEHRYALLELSLLGQDQDDL 269 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------CCTTC---HHHHHHHHHHHHHHHC----
T ss_pred cccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhC--------CchhH---HHHHHHHHHHHHHHhhHHHH
Confidence 2344678999999999999999999999999874 23222 33467788899999998887
No 54
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.86 E-value=1.1e-19 Score=164.47 Aligned_cols=233 Identities=13% Similarity=0.049 Sum_probs=179.2
Q ss_pred cHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHH
Q 010446 218 NYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLF 297 (510)
Q Consensus 218 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 297 (510)
++++|...|+++ |.+|...|++++|+.+|++++++..+.. +.+..+.++.++|.+|
T Consensus 32 ~~~~A~~~~~~a----------------------~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~a~~~~~lg~~~ 87 (292)
T 1qqe_A 32 KFEEAADLCVQA----------------------ATIYRLRKELNLAGDSFLKAADYQKKAG--NEDEAGNTYVEAYKCF 87 (292)
T ss_dssp HHHHHHHHHHHH----------------------HHHHHHTTCTHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHH----------------------HHHHHHcCCHHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHH
Confidence 588888888876 4567789999999999999999987753 3445678999999999
Q ss_pred HHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHH
Q 010446 298 IKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCAN-GNAEEAVELYKKALRVIKDSNYMSLDDSIMENMR 376 (510)
Q Consensus 298 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 376 (510)
...|++++|+.++++++++.... .+....+.++.++|.+|... |++++|+.+|++++++.+.. .+......++
T Consensus 88 ~~~g~~~~A~~~~~~Al~l~~~~--g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~----~~~~~~~~~~ 161 (292)
T 1qqe_A 88 KSGGNSVNAVDSLENAIQIFTHR--GQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD----QSVALSNKCF 161 (292)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT----TCHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhC----CChHHHHHHH
Confidence 99999999999999999998765 23344678899999999996 99999999999999998752 2334446778
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhh
Q 010446 377 IDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSI 456 (510)
Q Consensus 377 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 456 (510)
.++|.++..+|++++|+.+|++++.+..... .........+.++|.++..+|++++|+.+|++++.+..... ....
T Consensus 162 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~---~~~~ 237 (292)
T 1qqe_A 162 IKCADLKALDGQYIEASDIYSKLIKSSMGNR-LSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFA---DSRE 237 (292)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT-TTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC------------
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC-cccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC---CcHH
Confidence 9999999999999999999999998642210 00113345788999999999999999999999988543221 1112
Q ss_pred HHHHHHHHHHHH--hcCChHHHHHHHHHHH
Q 010446 457 SFPMLHLGITLY--HLNRDKEAEKLVLEAL 484 (510)
Q Consensus 457 ~~~~~~la~~~~--~~g~~~~A~~~~~~al 484 (510)
...+..++..+. ..+++++|+..|++++
T Consensus 238 ~~~l~~l~~~~~~~~~~~~~~A~~~~~~~~ 267 (292)
T 1qqe_A 238 SNFLKSLIDAVNEGDSEQLSEHCKEFDNFM 267 (292)
T ss_dssp HHHHHHHHHHHHTTCTTTHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHhccCC
Confidence 234556666665 4566777777776553
No 55
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.85 E-value=3.1e-19 Score=162.89 Aligned_cols=248 Identities=10% Similarity=0.058 Sum_probs=196.3
Q ss_pred hhhcHHHHHHHHHHHHHHHHHh-c--CCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHH
Q 010446 215 TLENYEKSMLVYQRVINVLESR-Y--GKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLF 291 (510)
Q Consensus 215 ~~g~~~~A~~~~~~al~~~~~~-~--~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 291 (510)
..|++++|..+++++.+..... + +++.......+...|.+|...|++++|+.+|.+++++..+.. +....+.++.
T Consensus 3 ~~~~~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~a~~~~ 80 (307)
T 2ifu_A 3 AAQKISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNR--SLFHAAKAFE 80 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC--CHHHHHHHHH
Confidence 4688999999999998766531 2 233345566777888999999999999999999999987753 3456678899
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChH
Q 010446 292 SLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSI 371 (510)
Q Consensus 292 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 371 (510)
++|.+|...|++++|+.+|++++++..... +....+.++.++|.+|.. |++++|+.+|++++.+.+.. .+...
T Consensus 81 ~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g--~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~----~~~~~ 153 (307)
T 2ifu_A 81 QAGMMLKDLQRMPEAVQYIEKASVMYVENG--TPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENE----ERLRQ 153 (307)
T ss_dssp HHHHHHHHTTCGGGGHHHHHHHHHHHHTTT--CHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHT----TCHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhC----CChhH
Confidence 999999999999999999999999986541 233467889999999999 99999999999999998763 34445
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCC
Q 010446 372 MENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGP 451 (510)
Q Consensus 372 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 451 (510)
...++.++|.++..+|++++|+.+|++++.+..... ..+.....+..+|.++..+|++++|+.+|++++ +....
T Consensus 154 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~--- 227 (307)
T 2ifu_A 154 AAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME--NYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF--- 227 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS---
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC--ChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC---
Confidence 677889999999999999999999999999887652 234455688899999999999999999999998 53111
Q ss_pred CChhhHHHHHHHHHHHHhcCChHHHHH
Q 010446 452 DDQSISFPMLHLGITLYHLNRDKEAEK 478 (510)
Q Consensus 452 ~~~~~~~~~~~la~~~~~~g~~~~A~~ 478 (510)
........+..++..+ ..|+.+.+..
T Consensus 228 ~~~~e~~~l~~l~~~~-~~~d~~~~~~ 253 (307)
T 2ifu_A 228 SGSEDCAALEDLLQAY-DEQDEEQLLR 253 (307)
T ss_dssp TTSHHHHHHHHHHHHH-HTTCHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-HhcCHHHHHH
Confidence 1122334456666665 5677665555
No 56
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.85 E-value=3.4e-19 Score=162.61 Aligned_cols=247 Identities=10% Similarity=0.067 Sum_probs=193.9
Q ss_pred hhCChHHHHHHHHHHHHhhhh--c--CCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHH
Q 010446 174 YIGDLKFVQSLLDMMSGIVDS--L--KDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLL 249 (510)
Q Consensus 174 ~~g~~~~A~~~~~~~~~~~~~--~--~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 249 (510)
..|++++|..+++++.+.... + +.+.......+...|.+|...|++++|+..|.+++++..+. .+....+.++.
T Consensus 3 ~~~~~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~ 80 (307)
T 2ifu_A 3 AAQKISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANN--RSLFHAAKAFE 80 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHH
Confidence 457788888888888775542 1 23444455567777899999999999999999999998775 33456788999
Q ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHH
Q 010446 250 GMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVG 329 (510)
Q Consensus 250 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 329 (510)
++|.+|...|++++|+.+|++++++..... +....+.++.++|.+|.. |++++|+.+|++++++.... .+.....
T Consensus 81 ~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g--~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~--~~~~~~~ 155 (307)
T 2ifu_A 81 QAGMMLKDLQRMPEAVQYIEKASVMYVENG--TPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENE--ERLRQAA 155 (307)
T ss_dssp HHHHHHHHTTCGGGGHHHHHHHHHHHHTTT--CHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHT--TCHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhC--CChhHHH
Confidence 999999999999999999999999987643 333457889999999999 99999999999999998764 1233467
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCC
Q 010446 330 MAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGK 409 (510)
Q Consensus 330 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 409 (510)
.++.++|.++...|++++|+.+|++++.+..+. .........+.++|.++...|++++|+.+|++++ +....
T Consensus 156 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~--- 227 (307)
T 2ifu_A 156 ELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM----ENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF--- 227 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS---
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc----CChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC---
Confidence 889999999999999999999999999998763 2344455678899999999999999999999998 53221
Q ss_pred CChhHHHHHHHHHHHHHhccCHHHHHH
Q 010446 410 EHPSFVTHLLNLAASYSRSKNFVEAER 436 (510)
Q Consensus 410 ~~~~~~~~~~~la~~~~~~g~~~~A~~ 436 (510)
........+..++..+ ..|+.+.+..
T Consensus 228 ~~~~e~~~l~~l~~~~-~~~d~~~~~~ 253 (307)
T 2ifu_A 228 SGSEDCAALEDLLQAY-DEQDEEQLLR 253 (307)
T ss_dssp TTSHHHHHHHHHHHHH-HTTCHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-HhcCHHHHHH
Confidence 1223344556666665 5677655544
No 57
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.85 E-value=4.5e-19 Score=159.24 Aligned_cols=225 Identities=15% Similarity=0.159 Sum_probs=193.4
Q ss_pred hhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHh----hhcHHHHHHHHHHHHHHHH
Q 010446 159 IEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYST----LENYEKSMLVYQRVINVLE 234 (510)
Q Consensus 159 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~ 234 (510)
+..+.++..+|.++...|++++|+.+|+++... .+ ..+++.+|.+|.. .+++++|+.+|+++++.
T Consensus 3 ~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~------~~---~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~-- 71 (273)
T 1ouv_A 3 EQDPKELVGLGAKSYKEKDFTQAKKYFEKACDL------KE---NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL-- 71 (273)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT------TC---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--
T ss_pred CCChHHHHHHHHHHHhCCCHHHHHHHHHHHHHC------CC---HHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC--
Confidence 456778999999999999999999999998861 12 2458899999999 99999999999999874
Q ss_pred HhcCCCChhHHHHHHHHHHHHhh----cCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHH----cCChHHH
Q 010446 235 SRYGKTSILLVTSLLGMAKVLGS----IGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIK----EGKAVDA 306 (510)
Q Consensus 235 ~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A 306 (510)
+ ...++..+|.+|.. .+++++|+.+++++++. + ...++..+|.+|.. .+++++|
T Consensus 72 -----~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~-------~---~~~a~~~lg~~~~~~~~~~~~~~~A 133 (273)
T 1ouv_A 72 -----N---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL-------K---YAEGCASLGGIYHDGKVVTRDFKKA 133 (273)
T ss_dssp -----T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred -----C---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc-------C---CccHHHHHHHHHHcCCCcccCHHHH
Confidence 1 35788899999999 99999999999999875 1 46789999999999 9999999
Q ss_pred HHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHH
Q 010446 307 ESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA----NGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAEL 382 (510)
Q Consensus 307 ~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~ 382 (510)
+.+++++++. + ...++.++|.++.. .+++++|+.+|+++++. + + ..++..+|.+
T Consensus 134 ~~~~~~a~~~-------~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~-------~--~---~~a~~~lg~~ 191 (273)
T 1ouv_A 134 VEYFTKACDL-------N---DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL-------K--D---SPGCFNAGNM 191 (273)
T ss_dssp HHHHHHHHHT-------T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------T--C---HHHHHHHHHH
T ss_pred HHHHHHHHhc-------C---cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------C--C---HHHHHHHHHH
Confidence 9999999974 2 23578899999999 99999999999999865 1 1 3466899999
Q ss_pred HHH----cCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHh----ccCHHHHHHHHHHHHHH
Q 010446 383 LHI----VGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSR----SKNFVEAERLLRICLDI 444 (510)
Q Consensus 383 ~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 444 (510)
|.. .+++++|+.+++++++. .+ ..++..+|.+|.. .+++++|+.+|+++++.
T Consensus 192 ~~~g~~~~~~~~~A~~~~~~a~~~-------~~---~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~ 251 (273)
T 1ouv_A 192 YHHGEGATKNFKEALARYSKACEL-------EN---GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKL 251 (273)
T ss_dssp HHHTCSSCCCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHH
T ss_pred HHcCCCCCccHHHHHHHHHHHHhC-------CC---HHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHc
Confidence 999 99999999999999874 11 4678899999999 99999999999999985
No 58
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.84 E-value=2.7e-19 Score=173.20 Aligned_cols=205 Identities=13% Similarity=0.107 Sum_probs=176.0
Q ss_pred CCchHHHHHHHHHHHHHHhhhcH-HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 010446 197 DDEPLLDAILLHMGSMYSTLENY-EKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITIL 275 (510)
Q Consensus 197 ~~~~~~~~~~~~l~~~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 275 (510)
...+..+.+++.+|.++...|++ ++|+.+|++++++ .|....++..+|.+|...|++++|+.+|++++++
T Consensus 96 ~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~- 166 (474)
T 4abn_A 96 GSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKL--------EPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTH- 166 (474)
T ss_dssp TTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT-
T ss_pred ccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-
Confidence 33455567799999999999999 9999999999986 2455778999999999999999999999999986
Q ss_pred HHhcCCCCcchHHHHHHHHHHHHHc---------CChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHC----
Q 010446 276 ELNRGTESADLVLPLFSLGSLFIKE---------GKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCAN---- 342 (510)
Q Consensus 276 ~~~~~~~~~~~~~~~~~la~~~~~~---------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~---- 342 (510)
.|. ..++.++|.++... |++++|+..+++++++ .|....++.++|.++...
T Consensus 167 -------~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~~~~~ 230 (474)
T 4abn_A 167 -------CKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM--------DVLDGRSWYILGNAYLSLYFNT 230 (474)
T ss_dssp -------CCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHT
T ss_pred -------CCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHhh
Confidence 344 58899999999999 9999999999999986 345567899999999999
Q ss_pred ----CCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHH
Q 010446 343 ----GNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHL 418 (510)
Q Consensus 343 ----g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 418 (510)
|++++|+.+|++++++. +..+....++.++|.+|...|++++|+..|++++.+ .|....++
T Consensus 231 ~~~~g~~~~A~~~~~~al~~~-------p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l--------~p~~~~a~ 295 (474)
T 4abn_A 231 GQNPKISQQALSAYAQAEKVD-------RKASSNPDLHLNRATLHKYEESYGEALEGFSQAAAL--------DPAWPEPQ 295 (474)
T ss_dssp TCCHHHHHHHHHHHHHHHHHC-------GGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHH
T ss_pred ccccchHHHHHHHHHHHHHhC-------CCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHH
Confidence 99999999999999982 211133567899999999999999999999999986 35556788
Q ss_pred HHHHHHHHhccCHHHHHHHHHHH
Q 010446 419 LNLAASYSRSKNFVEAERLLRIC 441 (510)
Q Consensus 419 ~~la~~~~~~g~~~~A~~~~~~a 441 (510)
..++.++...|++++|+..+.+.
T Consensus 296 ~~l~~~~~~lg~~~eAi~~~~~~ 318 (474)
T 4abn_A 296 QREQQLLEFLSRLTSLLESKGKT 318 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999876543
No 59
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.84 E-value=2.7e-19 Score=157.60 Aligned_cols=219 Identities=15% Similarity=0.201 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCC
Q 010446 202 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT 281 (510)
Q Consensus 202 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 281 (510)
.+..++.+|..+...|++++|+.+++++++. .|....++..+|.++...|++++|+.+++++++.
T Consensus 22 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------- 86 (243)
T 2q7f_A 22 ASMTGGQQMGRGSEFGDYEKAAEAFTKAIEE--------NKEDAIPYINFANLLSSVNELERALAFYDKALEL------- 86 (243)
T ss_dssp --------------------CCTTHHHHHTT--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-------
Confidence 4556889999999999999999999999873 3445778999999999999999999999999987
Q ss_pred CCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 010446 282 ESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKD 361 (510)
Q Consensus 282 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 361 (510)
.|....++..+|.++...|++++|+.+++++++.. |....++..+|.++...|++++|+.++++++..
T Consensus 87 -~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--- 154 (243)
T 2q7f_A 87 -DSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAG--------MENGDLFYMLGTVLVKLEQPKLALPYLQRAVEL--- 154 (243)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT--------CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH---
T ss_pred -CCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh---
Confidence 44567889999999999999999999999999862 233457889999999999999999999999987
Q ss_pred hccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHH
Q 010446 362 SNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRIC 441 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 441 (510)
.++. ..++..+|.++...|++++|+.++++++.. .|....++..+|.+|...|++++|+.+++++
T Consensus 155 ----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 219 (243)
T 2q7f_A 155 ----NEND---TEARFQFGMCLANEGMLDEALSQFAAVTEQ--------DPGHADAFYNAGVTYAYKENREKALEMLDKA 219 (243)
T ss_dssp ----CTTC---HHHHHHHHHHHHHHTCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCTTHHHHHHHHH
T ss_pred ----CCcc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 2333 346688999999999999999999999875 2344568899999999999999999999999
Q ss_pred HHHHHHHhCCCChhhHHHHHHHHHHHHhc
Q 010446 442 LDIMTKTVGPDDQSISFPMLHLGITLYHL 470 (510)
Q Consensus 442 l~~~~~~~~~~~~~~~~~~~~la~~~~~~ 470 (510)
+++ .|+...++..++.+....
T Consensus 220 ~~~--------~p~~~~~~~~~~~l~~~~ 240 (243)
T 2q7f_A 220 IDI--------QPDHMLALHAKKLLGHHH 240 (243)
T ss_dssp HHH--------CTTCHHHHHHHTC-----
T ss_pred Hcc--------CcchHHHHHHHHHHHhhc
Confidence 985 344445555555544433
No 60
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.83 E-value=4.3e-19 Score=171.81 Aligned_cols=240 Identities=13% Similarity=0.078 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHHHHcCChh-------HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCCh-HHHHHHHHHH
Q 010446 117 QLLELFNEVKSMIMMGNKN-------DAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDL-KFVQSLLDMM 188 (510)
Q Consensus 117 ~~~~l~~~~~~~~~~g~~~-------~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~~A~~~~~~~ 188 (510)
.+..+......++...... .....+++++..+.... ...+..+.++..+|.++...|++ ++|+..|+++
T Consensus 53 ~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~al~~l~~~~---~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~a 129 (474)
T 4abn_A 53 LVDRLYCFRDSYFETHSVEDAGRKQQDVQEEMEKTLQQMEEVL---GSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKA 129 (474)
T ss_dssp HHHHHHHHHHTHHHHSCGGGGGGHHHHHHHHHHHHHHHHHHHH---TTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHh---ccCchhHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 3344444444454444333 34445555555555433 22556788999999999999999 9999999999
Q ss_pred HHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhc---------C
Q 010446 189 SGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSI---------G 259 (510)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~---------g 259 (510)
+++. |....+++.+|.+|...|++++|+.+|++++++. |. ..++.++|.++... |
T Consensus 130 l~~~-------p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~--------p~-~~~~~~lg~~~~~~~~~~~~~~~g 193 (474)
T 4abn_A 130 VKLE-------PELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHC--------KN-KVSLQNLSMVLRQLQTDSGDEHSR 193 (474)
T ss_dssp HHHC-------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC--------CC-HHHHHHHHHHHTTCCCSCHHHHHH
T ss_pred HhhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--------CC-HHHHHHHHHHHHHhccCChhhhhh
Confidence 9875 4445678999999999999999999999998752 33 48899999999999 9
Q ss_pred CHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHc--------CChHHHHHHHHHHHHHHHHHcCCCChHHHHH
Q 010446 260 RAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKE--------GKAVDAESVFSRILKIYTKVYGENDGRVGMA 331 (510)
Q Consensus 260 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~--------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 331 (510)
++++|+.++++++++ .|....++.++|.+|... |++++|+..|++++++. +..+....+
T Consensus 194 ~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-----p~~~~~~~~ 260 (474)
T 4abn_A 194 HVMDSVRQAKLAVQM--------DVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVD-----RKASSNPDL 260 (474)
T ss_dssp HHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHC-----GGGGGCHHH
T ss_pred hHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhC-----CCcccCHHH
Confidence 999999999999997 466688999999999999 99999999999999862 111167789
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 010446 332 MCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEE 398 (510)
Q Consensus 332 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 398 (510)
+.++|.+|...|++++|+..|++++++ .++. ..++..++.++...|++++|+..+.+
T Consensus 261 ~~~lg~~~~~~g~~~~A~~~~~~al~l-------~p~~---~~a~~~l~~~~~~lg~~~eAi~~~~~ 317 (474)
T 4abn_A 261 HLNRATLHKYEESYGEALEGFSQAAAL-------DPAW---PEPQQREQQLLEFLSRLTSLLESKGK 317 (474)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-------CTTC---HHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCCC---HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999998 3343 35678899999999999999887654
No 61
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.83 E-value=3.1e-19 Score=157.22 Aligned_cols=220 Identities=11% Similarity=0.093 Sum_probs=161.9
Q ss_pred hhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcC
Q 010446 159 IEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYG 238 (510)
Q Consensus 159 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 238 (510)
...+..+..+|.++...|++++|+..+++++... |....++..+|.++...|++++|+..++++++..
T Consensus 20 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~----- 87 (243)
T 2q7f_A 20 HMASMTGGQQMGRGSEFGDYEKAAEAFTKAIEEN-------KEDAIPYINFANLLSSVNELERALAFYDKALELD----- 87 (243)
T ss_dssp ----------------------CCTTHHHHHTTC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----
T ss_pred hhHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhC-------cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-----
Confidence 3456778899999999999999999999998743 3335568899999999999999999999998862
Q ss_pred CCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 010446 239 KTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYT 318 (510)
Q Consensus 239 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 318 (510)
|....++..+|.++...|++++|+.+++++++. .|....++..+|.++...|++++|+.+++++++.
T Consensus 88 ---~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-- 154 (243)
T 2q7f_A 88 ---SSAATAYYGAGNVYVVKEMYKEAKDMFEKALRA--------GMENGDLFYMLGTVLVKLEQPKLALPYLQRAVEL-- 154 (243)
T ss_dssp ---TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------TCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH--
T ss_pred ---CcchHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh--
Confidence 344678899999999999999999999999987 3445678999999999999999999999999985
Q ss_pred HHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 010446 319 KVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEE 398 (510)
Q Consensus 319 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 398 (510)
.|....++..+|.++...|++++|+.++++++.. .++. ..++..+|.++...|++++|+.++++
T Consensus 155 ------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-------~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~ 218 (243)
T 2q7f_A 155 ------NENDTEARFQFGMCLANEGMLDEALSQFAAVTEQ-------DPGH---ADAFYNAGVTYAYKENREKALEMLDK 218 (243)
T ss_dssp ------CTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH-------CTTC---HHHHHHHHHHHHHTTCTTHHHHHHHH
T ss_pred ------CCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------Cccc---HHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 2334567889999999999999999999999887 2333 34678999999999999999999999
Q ss_pred HHHHHHHhhCCCChhHHHHHHHHHHHHHh
Q 010446 399 CLLITEKYKGKEHPSFVTHLLNLAASYSR 427 (510)
Q Consensus 399 al~~~~~~~~~~~~~~~~~~~~la~~~~~ 427 (510)
++.+. |....++..++.+...
T Consensus 219 ~~~~~--------p~~~~~~~~~~~l~~~ 239 (243)
T 2q7f_A 219 AIDIQ--------PDHMLALHAKKLLGHH 239 (243)
T ss_dssp HHHHC--------TTCHHHHHHHTC----
T ss_pred HHccC--------cchHHHHHHHHHHHhh
Confidence 98862 3344555555554443
No 62
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.83 E-value=1.2e-18 Score=146.34 Aligned_cols=169 Identities=15% Similarity=0.156 Sum_probs=149.2
Q ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccC
Q 010446 286 LVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYM 365 (510)
Q Consensus 286 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 365 (510)
.+.+|.++|.+|...|++++|+..|++++++ +|....++..+|.++...|++++|+..+.+++..
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~------- 68 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKA--------DPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVL------- 68 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc-------
Confidence 4678999999999999999999999999986 4556678999999999999999999999999887
Q ss_pred CCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Q 010446 366 SLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIM 445 (510)
Q Consensus 366 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 445 (510)
.++. ..++..+|.++...++++.|...+.+++.+ .|....++..+|.+|...|++++|+..|++++++
T Consensus 69 ~~~~---~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~- 136 (184)
T 3vtx_A 69 DTTS---AEAYYILGSANFMIDEKQAAIDALQRAIAL--------NTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISI- 136 (184)
T ss_dssp CCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-
T ss_pred Cchh---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHhCCchhHHHHHHHHHHh-
Confidence 3333 345688999999999999999999999875 3455678889999999999999999999999985
Q ss_pred HHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 010446 446 TKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIRE 488 (510)
Q Consensus 446 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 488 (510)
+|....++.++|.+|..+|++++|+.+|++++++..
T Consensus 137 -------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 172 (184)
T 3vtx_A 137 -------KPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEE 172 (184)
T ss_dssp -------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTH
T ss_pred -------cchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCc
Confidence 466678899999999999999999999999998653
No 63
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.83 E-value=4.9e-18 Score=150.44 Aligned_cols=203 Identities=11% Similarity=0.042 Sum_probs=176.8
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcC
Q 010446 117 QLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLK 196 (510)
Q Consensus 117 ~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 196 (510)
....++..+..+...|++++|+.+++++++. .|..+.++..+|.++...|++++|+..+++++...
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~---- 101 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEI----------DPSSADAHAALAVVFQTEMEPKLADEEYRKALASD---- 101 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHH----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhc----------CCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC----
Confidence 3555788999999999999999999999987 66678899999999999999999999999998774
Q ss_pred CCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 010446 197 DDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILE 276 (510)
Q Consensus 197 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 276 (510)
|....++..+|.++...|++++|+.++++++. .+..+....++..+|.++...|++++|+.+++++++.
T Consensus 102 ---~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~-- 170 (252)
T 2ho1_A 102 ---SRNARVLNNYGGFLYEQKRYEEAYQRLLEASQ------DTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRL-- 170 (252)
T ss_dssp ---TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT------CTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred ---cCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHh------CccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--
Confidence 22345688999999999999999999999876 1234667788999999999999999999999999987
Q ss_pred HhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 010446 277 LNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKAL 356 (510)
Q Consensus 277 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 356 (510)
.|....++..+|.++...|++++|+.+++++++. .|....++..++.++...|++++|..++++++
T Consensus 171 ------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~ 236 (252)
T 2ho1_A 171 ------NRNQPSVALEMADLLYKEREYVPARQYYDLFAQG--------GGQNARSLLLGIRLAKVFEDRDTAASYGLQLK 236 (252)
T ss_dssp ------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CcCcHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 3455788899999999999999999999998873 23344677889999999999999999999998
Q ss_pred HH
Q 010446 357 RV 358 (510)
Q Consensus 357 ~~ 358 (510)
+.
T Consensus 237 ~~ 238 (252)
T 2ho1_A 237 RL 238 (252)
T ss_dssp HH
T ss_pred HH
Confidence 87
No 64
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.83 E-value=4.6e-19 Score=178.02 Aligned_cols=177 Identities=19% Similarity=0.185 Sum_probs=158.8
Q ss_pred CCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 010446 282 ESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKD 361 (510)
Q Consensus 282 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 361 (510)
..|..+.++++||.+|..+|++++|+.+|++++++ +|....++.++|.+|..+|++++|+..|++++++
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l--------~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l--- 72 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEV--------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRI--- 72 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred CCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---
Confidence 46788999999999999999999999999999986 4566789999999999999999999999999998
Q ss_pred hccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHH
Q 010446 362 SNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRIC 441 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 441 (510)
.++. ..++.++|.++..+|++++|++.|++++++ .|....++.++|.+|..+|++++|+..|+++
T Consensus 73 ----~P~~---~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l--------~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~A 137 (723)
T 4gyw_A 73 ----SPTF---ADAYSNMGNTLKEMQDVQGALQCYTRAIQI--------NPAFADAHSNLASIHKDSGNIPEAIASYRTA 137 (723)
T ss_dssp ----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3333 567899999999999999999999999986 4666789999999999999999999999999
Q ss_pred HHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhcC
Q 010446 442 LDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFG 492 (510)
Q Consensus 442 l~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 492 (510)
+++ +|+...++.++|.++..+|++++|.+.+++++++......
T Consensus 138 l~l--------~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~~~ 180 (723)
T 4gyw_A 138 LKL--------KPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLE 180 (723)
T ss_dssp HHH--------CSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHh--------CCCChHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhHHh
Confidence 996 4667788999999999999999999999999999876543
No 65
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.83 E-value=5.4e-18 Score=150.19 Aligned_cols=203 Identities=13% Similarity=0.064 Sum_probs=176.4
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCC
Q 010446 202 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT 281 (510)
Q Consensus 202 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 281 (510)
...++..+|.++...|++++|+.+++++++.. |....++..+|.++...|++++|+.+++++++.
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--------~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~------- 100 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEID--------PSSADAHAALAVVFQTEMEPKLADEEYRKALAS------- 100 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhcC--------CChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-------
Confidence 37789999999999999999999999998862 344678999999999999999999999999987
Q ss_pred CCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 010446 282 ESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKD 361 (510)
Q Consensus 282 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 361 (510)
.|....++..+|.++...|++++|+.++++++. .+..+....++..+|.++...|++++|+.+++++++.
T Consensus 101 -~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~--- 170 (252)
T 2ho1_A 101 -DSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQ------DTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRL--- 170 (252)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT------CTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred -CcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHh------CccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc---
Confidence 344578899999999999999999999999986 1245667788999999999999999999999999987
Q ss_pred hccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHH
Q 010446 362 SNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRIC 441 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 441 (510)
.+.. ..++..+|.++...|++++|+.++++++.. .|.....+..++.++...|++++|..+++++
T Consensus 171 ----~~~~---~~~~~~la~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~ 235 (252)
T 2ho1_A 171 ----NRNQ---PSVALEMADLLYKEREYVPARQYYDLFAQG--------GGQNARSLLLGIRLAKVFEDRDTAASYGLQL 235 (252)
T ss_dssp ----CSCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ----Cccc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CcCcHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 2333 346688999999999999999999998763 3344567889999999999999999999999
Q ss_pred HHH
Q 010446 442 LDI 444 (510)
Q Consensus 442 l~~ 444 (510)
++.
T Consensus 236 ~~~ 238 (252)
T 2ho1_A 236 KRL 238 (252)
T ss_dssp HHH
T ss_pred HHH
Confidence 885
No 66
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.82 E-value=6.7e-19 Score=158.20 Aligned_cols=253 Identities=10% Similarity=0.021 Sum_probs=193.4
Q ss_pred HcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHH
Q 010446 130 MMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHM 209 (510)
Q Consensus 130 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l 209 (510)
..|++++|+..++++++.. ....+..+.++..+|.++...|++++|+..+++++... |....++..+
T Consensus 17 ~~~~~~~A~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-------~~~~~~~~~l 83 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASR------ALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIR-------PDMPEVFNYL 83 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSS------CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------CCCHHHHHHH
T ss_pred ccchHHHHHHHHHHHHhcc------cccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcC-------CCcHHHHHHH
Confidence 3578899999999988641 12346788999999999999999999999999998874 3334568999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHH
Q 010446 210 GSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLP 289 (510)
Q Consensus 210 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 289 (510)
|.++...|++++|+.+|+++++.. |....++..+|.++...|++++|+.++++++++ .|.....
T Consensus 84 a~~~~~~~~~~~A~~~~~~al~~~--------~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~--------~~~~~~~ 147 (275)
T 1xnf_A 84 GIYLTQAGNFDAAYEAFDSVLELD--------PTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD--------DPNDPFR 147 (275)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC--------TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHhcC--------ccccHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCChHH
Confidence 999999999999999999999862 334578899999999999999999999999987 2222333
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCC
Q 010446 290 LFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDD 369 (510)
Q Consensus 290 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 369 (510)
...++ ++...|++++|+..+++++... +.... ...++.++...++.++|+..+++++...... .
T Consensus 148 ~~~~~-~~~~~~~~~~A~~~~~~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~------~ 211 (275)
T 1xnf_A 148 SLWLY-LAEQKLDEKQAKEVLKQHFEKS-----DKEQW----GWNIVEFYLGNISEQTLMERLKADATDNTSL------A 211 (275)
T ss_dssp HHHHH-HHHHHHCHHHHHHHHHHHHHHS-----CCCST----HHHHHHHHTTSSCHHHHHHHHHHHCCSHHHH------H
T ss_pred HHHHH-HHHHhcCHHHHHHHHHHHHhcC-----CcchH----HHHHHHHHHHhcCHHHHHHHHHHHhcccccc------c
Confidence 33333 4466799999999999988752 22221 2347778888999999999999987654331 2
Q ss_pred hHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHH
Q 010446 370 SIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLL 438 (510)
Q Consensus 370 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 438 (510)
+....++..+|.++...|++++|+.+|++++.+. |.. +...+.++...|++++|++.+
T Consensus 212 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~--------p~~---~~~~~~~~~~l~~~~~a~~~~ 269 (275)
T 1xnf_A 212 EHLSETNFYLGKYYLSLGDLDSATALFKLAVANN--------VHN---FVEHRYALLELSLLGQDQDDL 269 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--------CTT---CHHHHHHHHHHHHHHHC----
T ss_pred ccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCC--------chh---HHHHHHHHHHHHHHHhhHHHH
Confidence 2335678999999999999999999999998742 221 123366788889999998877
No 67
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.82 E-value=1.8e-18 Score=145.20 Aligned_cols=166 Identities=17% Similarity=0.269 Sum_probs=147.9
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCC
Q 010446 245 VTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEN 324 (510)
Q Consensus 245 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 324 (510)
+.+|.++|.+|...|++++|+..|++++++ +|....++..+|.+|...|++++|+..+.+++..
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~-------- 68 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKA--------DPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVL-------- 68 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------
Confidence 568999999999999999999999999997 5667889999999999999999999999999875
Q ss_pred ChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 010446 325 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITE 404 (510)
Q Consensus 325 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 404 (510)
.+....++..+|.++...++++.|...+.+++.. .++. ..++..+|.++...|++++|+..|++++++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~-------~~~~---~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~-- 136 (184)
T 3vtx_A 69 DTTSAEAYYILGSANFMIDEKQAAIDALQRAIAL-------NTVY---ADAYYKLGLVYDSMGEHDKAIEAYEKTISI-- 136 (184)
T ss_dssp CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred CchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------Cccc---hHHHHHHHHHHHHhCCchhHHHHHHHHHHh--
Confidence 3444567888999999999999999999999987 3333 346688999999999999999999999986
Q ss_pred HhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Q 010446 405 KYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDI 444 (510)
Q Consensus 405 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 444 (510)
+|....++.++|.+|..+|++++|+.+|++++++
T Consensus 137 ------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 137 ------KPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp ------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred ------cchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 3566788999999999999999999999999984
No 68
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.82 E-value=1.8e-17 Score=143.86 Aligned_cols=207 Identities=12% Similarity=0.025 Sum_probs=176.1
Q ss_pred chHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHh
Q 010446 199 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELN 278 (510)
Q Consensus 199 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 278 (510)
.|....++..+|.++...|++++|+.+++++++.. |....++..+|.++...|++++|+.+++++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~---- 71 (225)
T 2vq2_A 4 ANQVSNIKTQLAMEYMRGQDYRQATASIEDALKSD--------PKNELAWLVRAEIYQYLKVNDKAQESFRQALSI---- 71 (225)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC--------ccchHHHHHHHHHHHHcCChHHHHHHHHHHHHh----
Confidence 35667779999999999999999999999998862 334678899999999999999999999999987
Q ss_pred cCCCCcchHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q 010446 279 RGTESADLVLPLFSLGSLFIKE-GKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALR 357 (510)
Q Consensus 279 ~~~~~~~~~~~~~~la~~~~~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 357 (510)
.|....++..+|.++... |++++|+.+++++++ .+..+....++..+|.++...|++++|+.+++++++
T Consensus 72 ----~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~ 141 (225)
T 2vq2_A 72 ----KPDSAEINNNYGWFLCGRLNRPAESMAYFDKALA------DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLA 141 (225)
T ss_dssp ----CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT------STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ----CCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHc------CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345577899999999999 999999999999987 134566678899999999999999999999999988
Q ss_pred HHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHH
Q 010446 358 VIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERL 437 (510)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 437 (510)
. .++. ..++..+|.++...|++++|+.++++++... + ......+..++.++...|++++|..+
T Consensus 142 ~-------~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~a~~~ 204 (225)
T 2vq2_A 142 A-------QPQF---PPAFKELARTKMLAGQLGDADYYFKKYQSRV-----E--VLQADDLLLGWKIAKALGNAQAAYEY 204 (225)
T ss_dssp H-------STTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-----C--SCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred h-------CCCC---chHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----C--CCCHHHHHHHHHHHHhcCcHHHHHHH
Confidence 7 2333 3467889999999999999999999998864 1 03345567888999999999999999
Q ss_pred HHHHHHH
Q 010446 438 LRICLDI 444 (510)
Q Consensus 438 ~~~al~~ 444 (510)
++.+...
T Consensus 205 ~~~~~~~ 211 (225)
T 2vq2_A 205 EAQLQAN 211 (225)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988764
No 69
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.82 E-value=7.8e-19 Score=176.38 Aligned_cols=175 Identities=21% Similarity=0.275 Sum_probs=157.8
Q ss_pred CchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH
Q 010446 198 DEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILEL 277 (510)
Q Consensus 198 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 277 (510)
..|..+.+++++|.++..+|++++|+.+|++++++ +|....++.++|.+|..+|++++|+.+|++++++
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l--------~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l--- 72 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEV--------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRI--- 72 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred CCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---
Confidence 45788889999999999999999999999999987 3556789999999999999999999999999998
Q ss_pred hcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q 010446 278 NRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALR 357 (510)
Q Consensus 278 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 357 (510)
.|....++.++|.++..+|++++|+..|++++++ +|....++.++|.++..+|++++|+..|+++++
T Consensus 73 -----~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l--------~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 73 -----SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI--------NPAFADAHSNLASIHKDSGNIPEAIASYRTALK 139 (723)
T ss_dssp -----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 5777899999999999999999999999999986 456678999999999999999999999999999
Q ss_pred HHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHh
Q 010446 358 VIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKY 406 (510)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 406 (510)
+ .++. ..++.++|.++...|++++|++.+++++++....
T Consensus 140 l-------~P~~---~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~ 178 (723)
T 4gyw_A 140 L-------KPDF---PDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQ 178 (723)
T ss_dssp H-------CSCC---HHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHH
T ss_pred h-------CCCC---hHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhH
Confidence 8 3444 4567999999999999999999999999987654
No 70
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.82 E-value=1.2e-17 Score=145.03 Aligned_cols=207 Identities=11% Similarity=0.010 Sum_probs=175.1
Q ss_pred ChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Q 010446 241 SILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKV 320 (510)
Q Consensus 241 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 320 (510)
.|....++..+|.++...|++++|+.+++++++. .|....++..+|.++...|++++|+.++++++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~---- 71 (225)
T 2vq2_A 4 ANQVSNIKTQLAMEYMRGQDYRQATASIEDALKS--------DPKNELAWLVRAEIYQYLKVNDKAQESFRQALSI---- 71 (225)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHcCChHHHHHHHHHHHHh----
Confidence 4667888999999999999999999999999987 3455788999999999999999999999999985
Q ss_pred cCCCChHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 010446 321 YGENDGRVGMAMCSLAHAKCAN-GNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEEC 399 (510)
Q Consensus 321 ~~~~~~~~~~~~~~la~~~~~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 399 (510)
.|....++..+|.++... |++++|+.++++++.. +..+....++..+|.++...|++++|+.+++++
T Consensus 72 ----~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~ 139 (225)
T 2vq2_A 72 ----KPDSAEINNNYGWFLCGRLNRPAESMAYFDKALAD--------PTYPTPYIANLNKGICSAKQGQFGLAEAYLKRS 139 (225)
T ss_dssp ----CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTS--------TTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ----CCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcC--------cCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 233456788999999999 9999999999999871 223334567789999999999999999999999
Q ss_pred HHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHH
Q 010446 400 LLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKL 479 (510)
Q Consensus 400 l~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 479 (510)
+... |....++..+|.++...|++++|..++++++... + ......+..++.++...|+.++|..+
T Consensus 140 ~~~~--------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~a~~~ 204 (225)
T 2vq2_A 140 LAAQ--------PQFPPAFKELARTKMLAGQLGDADYYFKKYQSRV-----E--VLQADDLLLGWKIAKALGNAQAAYEY 204 (225)
T ss_dssp HHHS--------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-----C--SCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHhC--------CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----C--CCCHHHHHHHHHHHHhcCcHHHHHHH
Confidence 8752 3445788899999999999999999999998852 2 03345567888899999999999999
Q ss_pred HHHHHHH
Q 010446 480 VLEALYI 486 (510)
Q Consensus 480 ~~~al~~ 486 (510)
++.+...
T Consensus 205 ~~~~~~~ 211 (225)
T 2vq2_A 205 EAQLQAN 211 (225)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9888764
No 71
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.81 E-value=4.6e-18 Score=151.46 Aligned_cols=209 Identities=16% Similarity=0.143 Sum_probs=177.2
Q ss_pred hhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHc
Q 010446 242 ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVY 321 (510)
Q Consensus 242 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 321 (510)
+.....++.+|..+...|++++|+..|+++++. .++++....++..+|.+|...|++++|+..|+++++..
T Consensus 12 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~-----~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~---- 82 (261)
T 3qky_A 12 HSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTY-----GRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIY---- 82 (261)
T ss_dssp CSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGG-----CSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-----CCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC----
Confidence 445678999999999999999999999999876 33445558899999999999999999999999999863
Q ss_pred CCCChHHHHHHHHHHHHHHH--------CCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHH--------------HHH
Q 010446 322 GENDGRVGMAMCSLAHAKCA--------NGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMR--------------IDL 379 (510)
Q Consensus 322 ~~~~~~~~~~~~~la~~~~~--------~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~--------------~~l 379 (510)
|+++....++..+|.++.. .|++++|+..|++++.. .|+.+....+. ..+
T Consensus 83 -p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-------~p~~~~~~~a~~~~~~~~~~~~~~~~~l 154 (261)
T 3qky_A 83 -QIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDR-------YPNHELVDDATQKIRELRAKLARKQYEA 154 (261)
T ss_dssp -TTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHH-------CTTCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH-------CcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566778899999999999 99999999999999987 34444444444 789
Q ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhc----------cCHHHHHHHHHHHHHHHHHHh
Q 010446 380 AELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRS----------KNFVEAERLLRICLDIMTKTV 449 (510)
Q Consensus 380 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~----------g~~~~A~~~~~~al~~~~~~~ 449 (510)
|.+|...|++++|+..|++++... ++++....++..+|.+|... |++++|+..|+++++.
T Consensus 155 a~~~~~~g~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~----- 224 (261)
T 3qky_A 155 ARLYERRELYEAAAVTYEAVFDAY-----PDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQI----- 224 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-----TTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHH-----
T ss_pred HHHHHHccCHHHHHHHHHHHHHHC-----CCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHH-----
Confidence 999999999999999999998763 34555778899999999977 9999999999999985
Q ss_pred CCCChhhHHHHHHHHHHHHhcCChHHHH
Q 010446 450 GPDDQSISFPMLHLGITLYHLNRDKEAE 477 (510)
Q Consensus 450 ~~~~~~~~~~~~~la~~~~~~g~~~~A~ 477 (510)
.|+++....+...++.++...|+++++.
T Consensus 225 ~p~~~~~~~a~~~l~~~~~~~~~~~~~~ 252 (261)
T 3qky_A 225 FPDSPLLRTAEELYTRARQRLTELEGDA 252 (261)
T ss_dssp CTTCTHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCChHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3677777888888999888888776654
No 72
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.81 E-value=5.9e-18 Score=150.76 Aligned_cols=210 Identities=12% Similarity=0.090 Sum_probs=177.5
Q ss_pred ChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhc
Q 010446 158 GIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRY 237 (510)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 237 (510)
.+..+..++.+|..++..|++++|+..|++++... +.++....+++.+|.++...|++++|+..|+++++..
T Consensus 11 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~----p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~---- 82 (261)
T 3qky_A 11 RHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYG----RTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIY---- 82 (261)
T ss_dssp CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC----SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----
T ss_pred CCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC----CCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC----
Confidence 56667899999999999999999999999998764 4455567789999999999999999999999999873
Q ss_pred CCCChhHHHHHHHHHHHHhh--------cCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHH--------------HHHHH
Q 010446 238 GKTSILLVTSLLGMAKVLGS--------IGRAKKAVEIYHRVITILELNRGTESADLVLPL--------------FSLGS 295 (510)
Q Consensus 238 ~~~~~~~~~~~~~la~~~~~--------~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~--------------~~la~ 295 (510)
++++....+++.+|.++.. .|++++|+..++++++.. ++++....+. ..+|.
T Consensus 83 -p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~~~~~~~~~~~~~~~la~ 156 (261)
T 3qky_A 83 -QIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY-----PNHELVDDATQKIRELRAKLARKQYEAAR 156 (261)
T ss_dssp -TTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC-----TTCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC-----cCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556778899999999999 999999999999999873 3344444444 88999
Q ss_pred HHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHHhhccC
Q 010446 296 LFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCAN----------GNAEEAVELYKKALRVIKDSNYM 365 (510)
Q Consensus 296 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~----------g~~~~A~~~~~~al~~~~~~~~~ 365 (510)
+|...|++++|+..|+++++.. ++++....++..+|.+|... |++++|+..|+++++.
T Consensus 157 ~~~~~g~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~------- 224 (261)
T 3qky_A 157 LYERRELYEAAAVTYEAVFDAY-----PDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQI------- 224 (261)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC-----TTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHH-------
T ss_pred HHHHccCHHHHHHHHHHHHHHC-----CCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHH-------
Confidence 9999999999999999999863 45555778999999999977 9999999999999987
Q ss_pred CCCChHHHHHHHHHHHHHHHcCChHHHH
Q 010446 366 SLDDSIMENMRIDLAELLHIVGRGQEGR 393 (510)
Q Consensus 366 ~~~~~~~~~~~~~la~~~~~~g~~~~A~ 393 (510)
.|+++....+...++.++...++++++.
T Consensus 225 ~p~~~~~~~a~~~l~~~~~~~~~~~~~~ 252 (261)
T 3qky_A 225 FPDSPLLRTAEELYTRARQRLTELEGDA 252 (261)
T ss_dssp CTTCTHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCChHHHHHHHHHHHHHHHHHHhhhhh
Confidence 5677777777788888888877776544
No 73
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.78 E-value=1.1e-17 Score=159.99 Aligned_cols=153 Identities=10% Similarity=0.001 Sum_probs=144.8
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCh
Q 010446 333 CSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHP 412 (510)
Q Consensus 333 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 412 (510)
...+..+..+|++++|+.++++++++..+. ++++++.++.++.+||.+|..+|++++|+.++++++++.++.+|++||
T Consensus 313 le~a~~~~~qg~~~eA~~l~~~aL~~~~~~--lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 390 (490)
T 3n71_A 313 LEKIDKARSEGLYHEVVKLCRECLEKQEPV--FADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNA 390 (490)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHTTT--BCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 344556778999999999999999998875 789999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 010446 413 SFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 487 (510)
Q Consensus 413 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 487 (510)
.++..+++||.+|..+|++++|+.+|++|+++.+..+|++||.+......++.++..+|.+++|...|+++.+..
T Consensus 391 ~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 391 QLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987644
No 74
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.78 E-value=1.1e-17 Score=159.99 Aligned_cols=153 Identities=10% Similarity=0.046 Sum_probs=146.6
Q ss_pred HHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchH
Q 010446 208 HMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLV 287 (510)
Q Consensus 208 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 287 (510)
..+..+..+|+|++|+.++++++++..+.++++||.++.++.++|.+|..+|+|++|+.++++++++.++..|++||.++
T Consensus 314 e~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a 393 (490)
T 3n71_A 314 EKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLG 393 (490)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 34555778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 010446 288 LPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIK 360 (510)
Q Consensus 288 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 360 (510)
.++++||.+|..+|++++|+.++++|+++.+..+|++||.+.....+++.++..++.+++|+..|.++.+...
T Consensus 394 ~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~ 466 (490)
T 3n71_A 394 MAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAAL 466 (490)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999977653
No 75
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.77 E-value=1.3e-16 Score=138.96 Aligned_cols=184 Identities=11% Similarity=0.057 Sum_probs=153.1
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCC
Q 010446 246 TSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEND 325 (510)
Q Consensus 246 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 325 (510)
..+..+|.++...|++++|+..|++++++. ++....++..+|.++...|++++|+.+++++++. .
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~ 72 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLT-------NNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKK--------N 72 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-------TTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--------T
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcc-------CCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHh--------C
Confidence 678999999999999999999999999882 2134567778999999999999999999999974 5
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCCh----HHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 010446 326 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDS----IMENMRIDLAELLHIVGRGQEGRELLEECLL 401 (510)
Q Consensus 326 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~----~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 401 (510)
|....++..+|.++...|++++|+..++++++. .|+++ ....++..+|.++...|++++|+..|+++++
T Consensus 73 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-------~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 145 (228)
T 4i17_A 73 YNLANAYIGKSAAYRDMKNNQEYIATLTEGIKA-------VPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATD 145 (228)
T ss_dssp CSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------STTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred cchHHHHHHHHHHHHHcccHHHHHHHHHHHHHH-------CCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHh
Confidence 667789999999999999999999999999988 33333 2335789999999999999999999999987
Q ss_pred HHHHhhCCCChh--HHHHHHHHHHHHHhccCH---------------------------HHHHHHHHHHHHHHHHHhCCC
Q 010446 402 ITEKYKGKEHPS--FVTHLLNLAASYSRSKNF---------------------------VEAERLLRICLDIMTKTVGPD 452 (510)
Q Consensus 402 ~~~~~~~~~~~~--~~~~~~~la~~~~~~g~~---------------------------~~A~~~~~~al~~~~~~~~~~ 452 (510)
+ .|. ...++..+|.+|...|+. ++|+.++++++++ .|+
T Consensus 146 ~--------~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l-----~p~ 212 (228)
T 4i17_A 146 V--------TSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTL-----SPN 212 (228)
T ss_dssp S--------SCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CTT
T ss_pred c--------CCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCC
Confidence 4 566 778999999999999988 8888888888875 233
Q ss_pred ChhhHHHHHHHHHHH
Q 010446 453 DQSISFPMLHLGITL 467 (510)
Q Consensus 453 ~~~~~~~~~~la~~~ 467 (510)
+ ..+...++.+.
T Consensus 213 ~---~~~~~~l~~i~ 224 (228)
T 4i17_A 213 R---TEIKQMQDQVK 224 (228)
T ss_dssp C---HHHHHHHHHHH
T ss_pred C---HHHHHHHHHHH
Confidence 3 44445555543
No 76
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.76 E-value=9.2e-18 Score=161.45 Aligned_cols=254 Identities=12% Similarity=0.033 Sum_probs=146.7
Q ss_pred HHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCCh---HHHHHHHHHHHHhhhhcCCCc
Q 010446 123 NEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDL---KFVQSLLDMMSGIVDSLKDDE 199 (510)
Q Consensus 123 ~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~---~~A~~~~~~~~~~~~~~~~~~ 199 (510)
..+..+...|++++|+.+|+++.+. ..+.+++.+|.+|...|++ ++|+.+|+++...
T Consensus 8 ~la~~~~~~g~~~~A~~~~~~aa~~------------g~~~A~~~Lg~~y~~~g~~~d~~~A~~~~~~A~~~-------- 67 (452)
T 3e4b_A 8 RLANEALKRGDTVTAQQNYQQLAEL------------GYSEAQVGLADIQVGTRDPAQIKQAEATYRAAADT-------- 67 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH------------TCCTGGGTCC---------------------------------
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHC------------CCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhC--------
Confidence 3677889999999999999998754 2345678899999999998 8999999988743
Q ss_pred hHHHHHHHHHHHHHHhhh-----cHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Q 010446 200 PLLDAILLHMGSMYSTLE-----NYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITI 274 (510)
Q Consensus 200 ~~~~~~~~~l~~~~~~~g-----~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 274 (510)
...+++.+|.++...| ++++|+.+|+++++. +++ .+++++|.+|...+...++...++.....
T Consensus 68 --~~~A~~~Lg~~~~~~~~~~~~~~~~A~~~~~~Aa~~-------g~~---~A~~~Lg~~y~~~~~~~~~~~a~~~~~~a 135 (452)
T 3e4b_A 68 --SPRAQARLGRLLAAKPGATEAEHHEAESLLKKAFAN-------GEG---NTLIPLAMLYLQYPHSFPNVNAQQQISQW 135 (452)
T ss_dssp -----CHHHHHHHHHTC--CCHHHHHHHHHHHHHHHHT-------TCS---SCHHHHHHHHHHCGGGCTTCCHHHHHHHH
T ss_pred --CHHHHHHHHHHHHhCCCCCCcCHHHHHHHHHHHHHC-------CCH---HHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 2334788999666655 899999999999872 222 26778888888877665554444333333
Q ss_pred HHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCC---CHHHHHHH
Q 010446 275 LELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANG---NAEEAVEL 351 (510)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g---~~~~A~~~ 351 (510)
.+. ....+...+|.+|...+.++++............ ..++. ++.++|.+|...| ++++|+.+
T Consensus 136 ~~~-------g~~~a~~~Lg~~y~~~~~~~~~~~~a~~~~~~a~----~~~~~---a~~~Lg~~~~~~g~~~~~~~A~~~ 201 (452)
T 3e4b_A 136 QAA-------GYPEAGLAQVLLYRTQGTYDQHLDDVERICKAAL----NTTDI---CYVELATVYQKKQQPEQQAELLKQ 201 (452)
T ss_dssp HHH-------TCTTHHHHHHHHHHHHTCGGGGHHHHHHHHHHHT----TTCTT---HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHC-------CCHHHHHHHHHHHHcCCCcccCHHHHHHHHHHHH----cCCHH---HHHHHHHHHHHcCCcccHHHHHHH
Confidence 221 2256777888888888877776665433332221 12332 7778888888888 88888888
Q ss_pred HHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHc----CChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHH-H-
Q 010446 352 YKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIV----GRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAAS-Y- 425 (510)
Q Consensus 352 ~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~----g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~-~- 425 (510)
|+++.+. ++.. +..+.++|.+|... +++++|+.+|+++. +....++.++|.+ |
T Consensus 202 ~~~aa~~-------g~~~---a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-----------~g~~~a~~~Lg~~~~~ 260 (452)
T 3e4b_A 202 MEAGVSR-------GTVT---AQRVDSVARVLGDATLGTPDEKTAQALLEKIA-----------PGYPASWVSLAQLLYD 260 (452)
T ss_dssp HHHHHHT-------TCSC---HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-----------GGSTHHHHHHHHHHHH
T ss_pred HHHHHHC-------CCHH---HHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHh
Confidence 8887764 2222 22335566666543 56666666666653 1223445555555 3
Q ss_pred -HhccCHHHHHHHHHHHHH
Q 010446 426 -SRSKNFVEAERLLRICLD 443 (510)
Q Consensus 426 -~~~g~~~~A~~~~~~al~ 443 (510)
...+++++|+.+|+++.+
T Consensus 261 ~~~~~d~~~A~~~~~~Aa~ 279 (452)
T 3e4b_A 261 FPELGDVEQMMKYLDNGRA 279 (452)
T ss_dssp SGGGCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHH
Confidence 345566666666665553
No 77
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.75 E-value=1.5e-16 Score=138.56 Aligned_cols=170 Identities=12% Similarity=0.165 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCC
Q 010446 162 VAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTS 241 (510)
Q Consensus 162 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 241 (510)
+..+..+|.++...|++++|+..|++++.+.. ...+ .+++.+|.++...|++++|+.+++++++. .
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~---~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~ 72 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTN---NQDS---VTAYNCGVCADNIKKYKEAADYFDIAIKK--------N 72 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT---TCCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHT--------T
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccC---CCCc---HHHHHHHHHHHHhhcHHHHHHHHHHHHHh--------C
Confidence 47899999999999999999999999998752 1222 34677999999999999999999999974 3
Q ss_pred hhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCc----chHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q 010446 242 ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESA----DLVLPLFSLGSLFIKEGKAVDAESVFSRILKIY 317 (510)
Q Consensus 242 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~----~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 317 (510)
|....++..+|.+|...|++++|+..+++++++. ++++ ..+.++..+|.++...|++++|+..|++++++
T Consensus 73 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-----p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~- 146 (228)
T 4i17_A 73 YNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAV-----PGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV- 146 (228)
T ss_dssp CSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS-
T ss_pred cchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-----CCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc-
Confidence 5667889999999999999999999999999872 1222 12367999999999999999999999999874
Q ss_pred HHHcCCCChH--HHHHHHHHHHHHHHCCCH---------------------------HHHHHHHHHHHHH
Q 010446 318 TKVYGENDGR--VGMAMCSLAHAKCANGNA---------------------------EEAVELYKKALRV 358 (510)
Q Consensus 318 ~~~~~~~~~~--~~~~~~~la~~~~~~g~~---------------------------~~A~~~~~~al~~ 358 (510)
+|. ...++.++|.++...|+. ++|+.++++++++
T Consensus 147 -------~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l 209 (228)
T 4i17_A 147 -------TSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTL 209 (228)
T ss_dssp -------SCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------CCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 567 788999999999998888 8888888888887
No 78
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.74 E-value=5e-16 Score=132.43 Aligned_cols=178 Identities=13% Similarity=0.029 Sum_probs=147.5
Q ss_pred HHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHH
Q 010446 298 IKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRI 377 (510)
Q Consensus 298 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 377 (510)
...|++++|...++.... +......++..+|.++...|++++|+.++++++.+.... .+++....++.
T Consensus 3 ~~~g~~~~A~~~~~~~~~--------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~ 70 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLA--------HPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKS----GDHTAEHRALH 70 (203)
T ss_dssp ----CHHHHHHHHHHHHT--------STTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT----CCHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhcC--------ChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHc----CCcHHHHHHHH
Confidence 467899999985544321 334577899999999999999999999999999998863 45667788899
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhH
Q 010446 378 DLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSIS 457 (510)
Q Consensus 378 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 457 (510)
++|.++...|++++|+.++++++.+.+.. +........++.++|.++...|++++|+.++++++.+.... .+.....
T Consensus 71 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~ 147 (203)
T 3gw4_A 71 QVGMVERMAGNWDAARRCFLEERELLASL-PEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA--DDQVAIA 147 (203)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHc-CccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--cchHHHH
Confidence 99999999999999999999999998754 22233677889999999999999999999999999987654 2334456
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHh
Q 010446 458 FPMLHLGITLYHLNRDKEAEKLVLEALYIREIA 490 (510)
Q Consensus 458 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 490 (510)
.++..+|.++...|++++|..++++++++.++.
T Consensus 148 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 180 (203)
T 3gw4_A 148 CAFRGLGDLAQQEKNLLEAQQHWLRARDIFAEL 180 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHc
Confidence 678999999999999999999999999999885
No 79
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.74 E-value=1.5e-16 Score=152.97 Aligned_cols=287 Identities=13% Similarity=0.052 Sum_probs=209.3
Q ss_pred HHHHHHHHHHcC-----ChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhc
Q 010446 121 LFNEVKSMIMMG-----NKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSL 195 (510)
Q Consensus 121 l~~~~~~~~~~g-----~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 195 (510)
.+..+..+...| ++++|+.+|+++++. ..+.+++.+|.+|...+..+++...++........
T Consensus 72 ~~~Lg~~~~~~~~~~~~~~~~A~~~~~~Aa~~------------g~~~A~~~Lg~~y~~~~~~~~~~~a~~~~~~a~~~- 138 (452)
T 3e4b_A 72 QARLGRLLAAKPGATEAEHHEAESLLKKAFAN------------GEGNTLIPLAMLYLQYPHSFPNVNAQQQISQWQAA- 138 (452)
T ss_dssp HHHHHHHHHTC--CCHHHHHHHHHHHHHHHHT------------TCSSCHHHHHHHHHHCGGGCTTCCHHHHHHHHHHH-
T ss_pred HHHHHHHHHhCCCCCCcCHHHHHHHHHHHHHC------------CCHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHC-
Confidence 555666555555 788999999998763 12237888999998877666554444443333221
Q ss_pred CCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcC---CHHHHHHHHHHHH
Q 010446 196 KDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIG---RAKKAVEIYHRVI 272 (510)
Q Consensus 196 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~al 272 (510)
+. ..+.+.+|.+|...+.++++............ ..++. +++.+|.+|...| ++++|+.+|+++.
T Consensus 139 g~-----~~a~~~Lg~~y~~~~~~~~~~~~a~~~~~~a~----~~~~~---a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa 206 (452)
T 3e4b_A 139 GY-----PEAGLAQVLLYRTQGTYDQHLDDVERICKAAL----NTTDI---CYVELATVYQKKQQPEQQAELLKQMEAGV 206 (452)
T ss_dssp TC-----TTHHHHHHHHHHHHTCGGGGHHHHHHHHHHHT----TTCTT---HHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CC-----HHHHHHHHHHHHcCCCcccCHHHHHHHHHHHH----cCCHH---HHHHHHHHHHHcCCcccHHHHHHHHHHHH
Confidence 11 23478899999999877766665443333221 12232 7889999999999 9999999999998
Q ss_pred HHHHHhcCCCCcchHHHHHHHHHHHHHc----CChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHH-H--HHCCCH
Q 010446 273 TILELNRGTESADLVLPLFSLGSLFIKE----GKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHA-K--CANGNA 345 (510)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~la~~~~~~----g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~-~--~~~g~~ 345 (510)
+. .+..+..++++|.+|... +++++|+.+|+++. +....+++++|.+ + ...+++
T Consensus 207 ~~--------g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-----------~g~~~a~~~Lg~~~~~~~~~~d~ 267 (452)
T 3e4b_A 207 SR--------GTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-----------PGYPASWVSLAQLLYDFPELGDV 267 (452)
T ss_dssp HT--------TCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-----------GGSTHHHHHHHHHHHHSGGGCCH
T ss_pred HC--------CCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHhCCCCCCH
Confidence 75 344566668899999765 79999999999885 2234678889998 4 468999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcC-----ChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHH
Q 010446 346 EEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVG-----RGQEGRELLEECLLITEKYKGKEHPSFVTHLLN 420 (510)
Q Consensus 346 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g-----~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 420 (510)
++|+.+|+++.+. + + ..++.++|.+|. .| ++++|+.+|+++. +....++.+
T Consensus 268 ~~A~~~~~~Aa~~-------g--~---~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa-----------~g~~~A~~~ 323 (452)
T 3e4b_A 268 EQMMKYLDNGRAA-------D--Q---PRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV-----------GREVAADYY 323 (452)
T ss_dssp HHHHHHHHHHHHT-------T--C---HHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT-----------TTCHHHHHH
T ss_pred HHHHHHHHHHHHC-------C--C---HHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh-----------CCCHHHHHH
Confidence 9999999998854 1 2 346688999998 55 9999999999875 233578889
Q ss_pred HHHHHHh----ccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHh----cCChHHHHHHHHHHHH
Q 010446 421 LAASYSR----SKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYH----LNRDKEAEKLVLEALY 485 (510)
Q Consensus 421 la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~ 485 (510)
||.+|.. ..++++|..+|+++.+ ..+ ..+..+||.+|.. ..++.+|..+|+++.+
T Consensus 324 Lg~~y~~G~g~~~d~~~A~~~~~~Aa~-------~g~---~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~A~~ 386 (452)
T 3e4b_A 324 LGQIYRRGYLGKVYPQKALDHLLTAAR-------NGQ---NSADFAIAQLFSQGKGTKPDPLNAYVFSQLAKA 386 (452)
T ss_dssp HHHHHHTTTTSSCCHHHHHHHHHHHHT-------TTC---TTHHHHHHHHHHSCTTBCCCHHHHHHHHHHHHT
T ss_pred HHHHHHCCCCCCcCHHHHHHHHHHHHh-------hCh---HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 9999887 4499999999999876 222 3567899999885 4689999999999865
No 80
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.74 E-value=5.6e-16 Score=140.35 Aligned_cols=193 Identities=11% Similarity=0.024 Sum_probs=159.4
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhH---HHHHHHHHHHHHhhCChHHHHHHHHHHHHhhh
Q 010446 117 QLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEE---VAILDIIALGYVYIGDLKFVQSLLDMMSGIVD 193 (510)
Q Consensus 117 ~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~ 193 (510)
....+...+..+...|++++|+.++++++.. ....+.. ...+..+|.++...|++++|+.++++++.+..
T Consensus 74 ~~~~l~~~i~~~~~~~~y~~a~~~~~~~l~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~ 146 (293)
T 3u3w_A 74 RKKQFKDQVIMLCKQKRYKEIYNKVWNELKK-------EEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQL 146 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-------CCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHHhcc-------ccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhc
Confidence 3444666788899999999999999998864 2223332 33455689999999999999999999998654
Q ss_pred hcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 010446 194 SLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVIT 273 (510)
Q Consensus 194 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 273 (510)
. ..+......++.++|.+|...|++++|+.+|+++++..... ..+.+..+.++.++|.+|..+|++++|+.+++++++
T Consensus 147 ~-~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~ 224 (293)
T 3u3w_A 147 T-GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL-HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE 224 (293)
T ss_dssp C-CSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred c-cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-ccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3 22334456679999999999999999999999999988764 235567788999999999999999999999999999
Q ss_pred HHHHhcCCCCcchHHHHHHHHHHHHHcCC-hHHHHHHHHHHHHHHHHH
Q 010446 274 ILELNRGTESADLVLPLFSLGSLFIKEGK-AVDAESVFSRILKIYTKV 320 (510)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~-~~~A~~~~~~al~~~~~~ 320 (510)
+..... +....+.++.++|.+|..+|+ +++|+.++++|+.+.+..
T Consensus 225 ~~~~~~--~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~ 270 (293)
T 3u3w_A 225 ISCRIN--SMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp HHHHTT--BCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHcC--cHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 987753 455668899999999999995 699999999999998875
No 81
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.74 E-value=1e-15 Score=138.67 Aligned_cols=195 Identities=11% Similarity=-0.007 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcC
Q 010446 117 QLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLK 196 (510)
Q Consensus 117 ~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 196 (510)
....+...+..+...|++++|+..+.++++.... ..........+..+|.++...|++++|+..+++++......
T Consensus 74 ~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~- 148 (293)
T 2qfc_A 74 RKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEY----HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTG- 148 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCC----CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCS-
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccC----ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcC-
Confidence 4455778889999999999999999998875110 00012234556779999999999999999999999876542
Q ss_pred CCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChh-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 010446 197 DDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSIL-LVTSLLGMAKVLGSIGRAKKAVEIYHRVITIL 275 (510)
Q Consensus 197 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 275 (510)
.+......+++.+|.+|...|++++|+.+|++++++.... ++.+. ...++.++|.+|...|++++|+.++++++++.
T Consensus 149 ~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~--~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 149 IDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL--HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp SCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc--CccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3334456789999999999999999999999999987764 23333 33789999999999999999999999999997
Q ss_pred HHhcCCCCcchHHHHHHHHHHHHHcCChHHH-HHHHHHHHHHHHHH
Q 010446 276 ELNRGTESADLVLPLFSLGSLFIKEGKAVDA-ESVFSRILKIYTKV 320 (510)
Q Consensus 276 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~al~~~~~~ 320 (510)
... .+....+.++.++|.+|...|++++| ..++++++.+.+..
T Consensus 227 ~~~--~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~ 270 (293)
T 2qfc_A 227 CRI--NSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp HHT--TBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred Hhc--CcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHh
Confidence 553 24455688999999999999999999 88899999988765
No 82
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.74 E-value=4.9e-16 Score=140.72 Aligned_cols=195 Identities=9% Similarity=0.018 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCC
Q 010446 202 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT 281 (510)
Q Consensus 202 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 281 (510)
....+...+..+...|++++|+..+.++++.... ..........+..+|.++...|++++|+.++++++++.... .
T Consensus 74 ~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~--~ 149 (293)
T 2qfc_A 74 RKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEY--HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTG--I 149 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCC--CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCS--S
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccC--ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcC--C
Confidence 3344667888999999999999999999875321 01112345567789999999999999999999999764332 1
Q ss_pred CCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 010446 282 ESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGR-VGMAMCSLAHAKCANGNAEEAVELYKKALRVIK 360 (510)
Q Consensus 282 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 360 (510)
+......+++++|.+|...|++++|+.++++++++.+... +.+. ...++.++|.+|..+|++++|+.++++++.+..
T Consensus 150 ~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~--~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 150 DVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH--DNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp CTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcC--ccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 2334567899999999999999999999999999877652 3333 337899999999999999999999999999986
Q ss_pred hhccCCCCChHHHHHHHHHHHHHHHcCChHHH-HHHHHHHHHHHHHh
Q 010446 361 DSNYMSLDDSIMENMRIDLAELLHIVGRGQEG-RELLEECLLITEKY 406 (510)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~al~~~~~~ 406 (510)
. ..+......++.++|.+|...|++++| ..++++++.+.+..
T Consensus 228 ~----~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~ 270 (293)
T 2qfc_A 228 R----INSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp H----TTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred h----cCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHh
Confidence 5 344555678899999999999999999 88899999988765
No 83
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.73 E-value=6.6e-16 Score=131.67 Aligned_cols=195 Identities=13% Similarity=0.138 Sum_probs=154.9
Q ss_pred HHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHH
Q 010446 128 MIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILL 207 (510)
Q Consensus 128 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (510)
++..|++++|...++.... +....+.++..+|.++...|++++|+.++++++.+.... ++.+....++.
T Consensus 2 ~~~~g~~~~A~~~~~~~~~----------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~ 70 (203)
T 3gw4_A 2 AFEAHDYALAERQAQALLA----------HPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKS-GDHTAEHRALH 70 (203)
T ss_dssp -----CHHHHHHHHHHHHT----------STTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHhcC----------ChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHc-CCcHHHHHHHH
Confidence 3567899999985544321 144678899999999999999999999999999988774 35567788899
Q ss_pred HHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchH
Q 010446 208 HMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLV 287 (510)
Q Consensus 208 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 287 (510)
.+|.++...|++++|+.++++++++.+.. +.+......++.++|.++...|++++|+.++++++++.+... +.....
T Consensus 71 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~ 147 (203)
T 3gw4_A 71 QVGMVERMAGNWDAARRCFLEERELLASL-PEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQAD--DQVAIA 147 (203)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT--CHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHc-CccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc--chHHHH
Confidence 99999999999999999999999998754 223236788899999999999999999999999999877643 334456
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHH
Q 010446 288 LPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHA 338 (510)
Q Consensus 288 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~ 338 (510)
.++.++|.++...|++++|..++++++++.++.. +......+...++.+
T Consensus 148 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~~~~~ 196 (203)
T 3gw4_A 148 CAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELE--DSEAVNELMTRLNGL 196 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcC--CHHHHHHHHhcccch
Confidence 7789999999999999999999999999988762 233345555555443
No 84
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.73 E-value=6.6e-15 Score=145.23 Aligned_cols=309 Identities=13% Similarity=0.050 Sum_probs=196.4
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCch
Q 010446 121 LFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEP 200 (510)
Q Consensus 121 l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 200 (510)
+...+. +...|++++|...|+++++. .|.....|..++..+...|++++|...|++++... |
T Consensus 16 w~~l~~-~~~~~~~~~a~~~~e~al~~----------~P~~~~~w~~~~~~~~~~~~~~~a~~~~~ral~~~-------p 77 (530)
T 2ooe_A 16 WSILIR-EAQNQPIDKARKTYERLVAQ----------FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKV-------L 77 (530)
T ss_dssp HHHHHH-HHHSSCHHHHHHHHHHHHTT----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTC-------C
T ss_pred HHHHHH-HHHhCCHHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC-------C
Confidence 333444 36789999999999999987 78888999999999999999999999999998764 2
Q ss_pred HHHHHHHHHHH-HHHhhhcHHHHHH----HHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhh---------cCCHHHHHH
Q 010446 201 LLDAILLHMGS-MYSTLENYEKSML----VYQRVINVLESRYGKTSILLVTSLLGMAKVLGS---------IGRAKKAVE 266 (510)
Q Consensus 201 ~~~~~~~~l~~-~~~~~g~~~~A~~----~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~---------~g~~~~A~~ 266 (510)
.. .++...+. .....|++++|.+ .|++++... +. ++.....+...+..... .|++++|..
T Consensus 78 ~~-~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~----g~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~a~~ 151 (530)
T 2ooe_A 78 HI-DLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI----GM-EIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRR 151 (530)
T ss_dssp CH-HHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT----TT-STTCHHHHHHHHHHHHHSCCCSSTTHHHHHHHHHH
T ss_pred Ch-HHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC----CC-CcccHHHHHHHHHHHhcCCCcccHHHHhHHHHHHH
Confidence 21 23454443 3344566666554 444444321 11 11111222222222211 233333333
Q ss_pred HHHHHHHH------------------------------------------------HHHhc------CC-----------
Q 010446 267 IYHRVITI------------------------------------------------LELNR------GT----------- 281 (510)
Q Consensus 267 ~~~~al~~------------------------------------------------~~~~~------~~----------- 281 (510)
+|++++.. ..... .+
T Consensus 152 ~y~~al~~P~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~A~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~ 231 (530)
T 2ooe_A 152 VYQRGCVNPMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQVD 231 (530)
T ss_dssp HHHHHTTSCCTTHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCSSSCCCCCC--CCHHHHHH
T ss_pred HHHHHHhchhhhHHHHHHHHHHHHHhhchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHH
Confidence 33332210 00000 00
Q ss_pred -----------------------------------CCcchHHHHHHHHHHHHH-------cCChH-------HHHHHHHH
Q 010446 282 -----------------------------------ESADLVLPLFSLGSLFIK-------EGKAV-------DAESVFSR 312 (510)
Q Consensus 282 -----------------------------------~~~~~~~~~~~la~~~~~-------~g~~~-------~A~~~~~~ 312 (510)
..|....++..+|..+.. .|+++ +|+..+++
T Consensus 232 ~w~~~~~~e~~~~~~~~~~~~~~~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~ 311 (530)
T 2ooe_A 232 MWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYER 311 (530)
T ss_dssp HHHHHHHHHHHCSSCCSCSHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCccCCcchhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHH
Confidence 012334566677777765 68877 67777777
Q ss_pred HHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHH
Q 010446 313 ILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEG 392 (510)
Q Consensus 313 al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 392 (510)
+++. ..|.....+..+|.++...|++++|...|++++++ .+..+ ..++..++.++.+.|++++|
T Consensus 312 Al~~-------~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~-------~p~~~--~~~~~~~~~~~~~~~~~~~A 375 (530)
T 2ooe_A 312 AIST-------LLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAI-------EDIDP--TLVYIQYMKFARRAEGIKSG 375 (530)
T ss_dssp HTTT-------TCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS-------SSSCH--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-------hCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCc-------cccCc--hHHHHHHHHHHHHhcCHHHH
Confidence 7641 13555678889999999999999999999999985 33332 23678888888888999999
Q ss_pred HHHHHHHHHHHHHhhCCCChhHHHHHHHHHHH-HHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcC
Q 010446 393 RELLEECLLITEKYKGKEHPSFVTHLLNLAAS-YSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLN 471 (510)
Q Consensus 393 ~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 471 (510)
+..|+++++.. |.....+...+.+ +...|++++|...|+++++.. |....++..++.++...|
T Consensus 376 ~~~~~~Al~~~--------~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~--------p~~~~~~~~~~~~~~~~g 439 (530)
T 2ooe_A 376 RMIFKKAREDA--------RTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKY--------GDIPEYVLAYIDYLSHLN 439 (530)
T ss_dssp HHHHHHHHTCT--------TCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH--------TTCHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHhcc--------CCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHC--------CCCHHHHHHHHHHHHhCC
Confidence 99999887631 1122233333333 335788888888888887742 333456677777777888
Q ss_pred ChHHHHHHHHHHHH
Q 010446 472 RDKEAEKLVLEALY 485 (510)
Q Consensus 472 ~~~~A~~~~~~al~ 485 (510)
+.++|..+|++++.
T Consensus 440 ~~~~Ar~~~~~al~ 453 (530)
T 2ooe_A 440 EDNNTRVLFERVLT 453 (530)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHhhHHHHHHHHHh
Confidence 88888888888776
No 85
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.73 E-value=3.6e-15 Score=143.38 Aligned_cols=238 Identities=8% Similarity=-0.023 Sum_probs=195.4
Q ss_pred HHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCC----------chHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHH
Q 010446 165 LDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDD----------EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLE 234 (510)
Q Consensus 165 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 234 (510)
....|..+...|+|++|++.|.++++..+..++. ......++..+|.+|...|++++|.+++.+++....
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~ 86 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMM 86 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 4456777889999999999999998865442211 123445688999999999999999999999999876
Q ss_pred HhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 010446 235 SRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRIL 314 (510)
Q Consensus 235 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 314 (510)
.. .+......+...++.++...|++++|+.++++++.+..... +.+....++.++|.+|...|++++|..++++++
T Consensus 87 ~~--~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~ 162 (434)
T 4b4t_Q 87 QF--AKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREK--RVFLKHSLSIKLATLHYQKKQYKDSLALINDLL 162 (434)
T ss_dssp TS--CHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSS--CCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred Hc--cchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHccChHHHHHHHHHHH
Confidence 54 22234456677889999999999999999999999987754 456678889999999999999999999999998
Q ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHH
Q 010446 315 KIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRE 394 (510)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 394 (510)
...... .+.+....++..++.+|...|++++|..++++++.+.... ...+......+..+|.++...|++++|..
T Consensus 163 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~y~~A~~ 237 (434)
T 4b4t_Q 163 REFKKL--DDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSI---YCPTQTVAELDLMSGILHCEDKDYKTAFS 237 (434)
T ss_dssp HHHTTS--SCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHTTSSSCHHHHHH
T ss_pred HHHHhc--ccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcC---CCchHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 876554 3567788999999999999999999999999999988763 33345567788899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCC
Q 010446 395 LLEECLLITEKYKGKEH 411 (510)
Q Consensus 395 ~~~~al~~~~~~~~~~~ 411 (510)
+|.+++...........
T Consensus 238 ~~~~a~~~~~~~~~~~~ 254 (434)
T 4b4t_Q 238 YFFESFESYHNLTTHNS 254 (434)
T ss_dssp HHHHHHHHHHHTTTSSC
T ss_pred HHHHHHHHhhhhhhhhh
Confidence 99999998877644433
No 86
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.73 E-value=3.5e-15 Score=147.18 Aligned_cols=213 Identities=13% Similarity=0.051 Sum_probs=162.5
Q ss_pred HHHHHHHHHHHhh-------cCCHH-------HHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHH
Q 010446 245 VTSLLGMAKVLGS-------IGRAK-------KAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVF 310 (510)
Q Consensus 245 ~~~~~~la~~~~~-------~g~~~-------~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 310 (510)
..++..+|..+.. .|+++ +|...++++++. ..|.....+..+|.++...|++++|...|
T Consensus 272 ~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~-------~~p~~~~l~~~~~~~~~~~g~~~~A~~~~ 344 (530)
T 2ooe_A 272 PDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAIST-------LLKKNMLLYFAYADYEESRMKYEKVHSIY 344 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTT-------TCSSCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHH-------hCcccHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 4456667777765 68876 777777777651 14666888999999999999999999999
Q ss_pred HHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHH-HHHcCCh
Q 010446 311 SRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAEL-LHIVGRG 389 (510)
Q Consensus 311 ~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~-~~~~g~~ 389 (510)
++++++ .+.++ ..++..++.++...|++++|...|+++++. .+... ..+...+.+ +...|++
T Consensus 345 ~~al~~-----~p~~~--~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~-------~~~~~---~~~~~~a~~~~~~~~~~ 407 (530)
T 2ooe_A 345 NRLLAI-----EDIDP--TLVYIQYMKFARRAEGIKSGRMIFKKARED-------ARTRH---HVYVTAALMEYYCSKDK 407 (530)
T ss_dssp HHHHHS-----SSSCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------TTCCT---HHHHHHHHHHHHHTCCH
T ss_pred HHHhCc-----cccCc--hHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-------cCCch---HHHHHHHHHHHHHcCCh
Confidence 999984 22222 357888999999999999999999999875 22222 122333433 3468999
Q ss_pred HHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChh-hHHHHHHHHHHHH
Q 010446 390 QEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQS-ISFPMLHLGITLY 468 (510)
Q Consensus 390 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~ 468 (510)
++|..+|+++++.. |....++..++.++...|+.++|..+|++++.. .+.+|. ....+........
T Consensus 408 ~~A~~~~e~al~~~--------p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~-----~~~~~~~~~~lw~~~~~~e~ 474 (530)
T 2ooe_A 408 SVAFKIFELGLKKY--------GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS-----GSLPPEKSGEIWARFLAFES 474 (530)
T ss_dssp HHHHHHHHHHHHHH--------TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHS-----CCSCGGGCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHC--------CCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHH
Confidence 99999999999864 344577889999999999999999999999873 233443 3446667777888
Q ss_pred hcCChHHHHHHHHHHHHHHHHhcCCC
Q 010446 469 HLNRDKEAEKLVLEALYIREIAFGKD 494 (510)
Q Consensus 469 ~~g~~~~A~~~~~~al~~~~~~~~~~ 494 (510)
..|+.+.+..+++++++...+-.+..
T Consensus 475 ~~G~~~~~~~~~~r~~~~~p~~~~~~ 500 (530)
T 2ooe_A 475 NIGDLASILKVEKRRFTAFREEYEGK 500 (530)
T ss_dssp HSSCHHHHHHHHHHHHHHTHHHHTTC
T ss_pred HcCCHHHHHHHHHHHHHHCchhccCc
Confidence 89999999999999999987655444
No 87
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.72 E-value=1e-15 Score=138.67 Aligned_cols=194 Identities=11% Similarity=0.065 Sum_probs=158.6
Q ss_pred hHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchH---HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHh
Q 010446 160 EEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPL---LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESR 236 (510)
Q Consensus 160 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 236 (510)
.....+...+..+...|++++|...+++++... ...+. ....+..+|.++...|++++|+.++++++.+...
T Consensus 73 ~~~~~l~~~i~~~~~~~~y~~a~~~~~~~l~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~- 147 (293)
T 3u3w_A 73 ERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKE----EYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLT- 147 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCC-
T ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHhccc----cCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcc-
Confidence 334445556778889999999999999988753 22233 2344556999999999999999999999985322
Q ss_pred cCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 237 YGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKI 316 (510)
Q Consensus 237 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 316 (510)
..+....+.++.++|.+|...|++++|+.+++++++..+... .+.+..+.++.++|.+|..+|++++|+.++++++++
T Consensus 148 -~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~ 225 (293)
T 3u3w_A 148 -GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH-DNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp -CSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc-cchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 122334567899999999999999999999999999887753 256677789999999999999999999999999999
Q ss_pred HHHHcCCCChHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHhh
Q 010446 317 YTKVYGENDGRVGMAMCSLAHAKCANG-NAEEAVELYKKALRVIKDS 362 (510)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~~~ 362 (510)
.... .+....+.++.++|.++...| .+++|+.++++++.+.+..
T Consensus 226 ~~~~--~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~ 270 (293)
T 3u3w_A 226 SCRI--NSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp HHHT--TBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHc--CcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 8775 245567889999999999999 5799999999999998864
No 88
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.72 E-value=1e-15 Score=139.65 Aligned_cols=224 Identities=9% Similarity=0.004 Sum_probs=178.1
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh-------hCCh-------HHHHHHHHHHHHhhhhcCCCch
Q 010446 135 NDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVY-------IGDL-------KFVQSLLDMMSGIVDSLKDDEP 200 (510)
Q Consensus 135 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~g~~-------~~A~~~~~~~~~~~~~~~~~~~ 200 (510)
++|+..|++++.. .|..+.+|..+|..+.. .|++ ++|...|++++... . |
T Consensus 33 ~~a~~~~~~al~~----------~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~---~---p 96 (308)
T 2ond_A 33 KRVMFAYEQCLLV----------LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL---L---K 96 (308)
T ss_dssp HHHHHHHHHHHHH----------HTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTT---T---T
T ss_pred HHHHHHHHHHHHH----------cCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHh---C---c
Confidence 6888999999987 78888999999988864 5886 89999999998732 1 3
Q ss_pred HHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcC
Q 010446 201 LLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRG 280 (510)
Q Consensus 201 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 280 (510)
....++..+|.++...|++++|...|++++++ .++++. .++..+|.++...|++++|...|+++++.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~--~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------ 163 (308)
T 2ond_A 97 KNMLLYFAYADYEESRMKYEKVHSIYNRLLAI-----EDIDPT--LVYIQYMKFARRAEGIKSGRMIFKKARED------ 163 (308)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS-----SSSCTH--HHHHHHHHHHHHHHCHHHHHHHHHHHHTS------
T ss_pred ccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc-----cccCcc--HHHHHHHHHHHHhcCHHHHHHHHHHHHhc------
Confidence 44556899999999999999999999999974 222222 27889999999999999999999999875
Q ss_pred CCCcchHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 010446 281 TESADLVLPLFSLGSLFI-KEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 359 (510)
Q Consensus 281 ~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 359 (510)
.|.....+...+.+.. ..|++++|...|+++++.. |....++..++.++...|++++|..+|++++...
T Consensus 164 --~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~ 233 (308)
T 2ond_A 164 --ARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKY--------GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSG 233 (308)
T ss_dssp --TTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH--------TTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSS
T ss_pred --CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcc
Confidence 2333455555555543 3799999999999999863 3345778899999999999999999999998741
Q ss_pred HhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q 010446 360 KDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLIT 403 (510)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 403 (510)
. ..+ .....++..++..+...|++++|..+++++++..
T Consensus 234 ~----l~p--~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~~~ 271 (308)
T 2ond_A 234 S----LPP--EKSGEIWARFLAFESNIGDLASILKVEKRRFTAF 271 (308)
T ss_dssp S----SCG--GGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHT
T ss_pred C----CCH--HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHc
Confidence 0 011 1234567888999999999999999999998875
No 89
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.71 E-value=4.6e-15 Score=135.35 Aligned_cols=225 Identities=14% Similarity=0.063 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhh-------cCCH-------HHHHHHHHHHHHHHHHhcCCCCcc
Q 010446 220 EKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGS-------IGRA-------KKAVEIYHRVITILELNRGTESAD 285 (510)
Q Consensus 220 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-------~g~~-------~~A~~~~~~al~~~~~~~~~~~~~ 285 (510)
++|+..|++++... |....++..+|..+.. .|++ ++|...|+++++.. .|.
T Consensus 33 ~~a~~~~~~al~~~--------p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~-------~p~ 97 (308)
T 2ond_A 33 KRVMFAYEQCLLVL--------GHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL-------LKK 97 (308)
T ss_dssp HHHHHHHHHHHHHH--------TTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTT-------TTT
T ss_pred HHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHh-------Ccc
Confidence 68889999999864 4456778888888763 5886 89999999998721 456
Q ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccC
Q 010446 286 LVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYM 365 (510)
Q Consensus 286 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 365 (510)
...++..+|.++...|++++|...|++++++ .+.++. .++.++|.++...|++++|...|+++++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~--~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------- 163 (308)
T 2ond_A 98 NMLLYFAYADYEESRMKYEKVHSIYNRLLAI-----EDIDPT--LVYIQYMKFARRAEGIKSGRMIFKKARED------- 163 (308)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS-----SSSCTH--HHHHHHHHHHHHHHCHHHHHHHHHHHHTS-------
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc-----cccCcc--HHHHHHHHHHHHhcCHHHHHHHHHHHHhc-------
Confidence 6788999999999999999999999999984 223332 27889999999999999999999999875
Q ss_pred CCCChHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Q 010446 366 SLDDSIMENMRIDLAELLH-IVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDI 444 (510)
Q Consensus 366 ~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 444 (510)
.+... .++...+.+.. ..|++++|+..|++++... |....++..+|.++...|++++|+..|++++..
T Consensus 164 ~p~~~---~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 164 ARTRH---HVYVTAALMEYYCSKDKSVAFKIFELGLKKY--------GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp TTCCT---HHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH--------TTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 23332 23444454433 3799999999999999864 344678899999999999999999999999882
Q ss_pred HHHHhCCCCh-hhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 010446 445 MTKTVGPDDQ-SISFPMLHLGITLYHLNRDKEAEKLVLEALYIREI 489 (510)
Q Consensus 445 ~~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 489 (510)
. .-.| .....+..++..+...|+.++|..+++++++....
T Consensus 233 ~-----~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~~~p~ 273 (308)
T 2ond_A 233 G-----SLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFRE 273 (308)
T ss_dssp S-----SSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTT
T ss_pred c-----CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHccc
Confidence 0 1133 35567788899999999999999999999987643
No 90
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.71 E-value=5.2e-15 Score=142.25 Aligned_cols=239 Identities=11% Similarity=0.040 Sum_probs=193.5
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCC---------ChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 010446 206 LLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKT---------SILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILE 276 (510)
Q Consensus 206 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 276 (510)
....|..+...|+|++|++.|.++++..+...... ......++..+|.+|...|++++|.+++.+++....
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~ 86 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMM 86 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 34567778889999999999999987643321100 123456789999999999999999999999999876
Q ss_pred HhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 010446 277 LNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKAL 356 (510)
Q Consensus 277 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 356 (510)
... +......+...++.++...|++++|+.++++++.+..... +.+....++.++|.++...|++++|..++++++
T Consensus 87 ~~~--~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~ 162 (434)
T 4b4t_Q 87 QFA--KSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREK--RVFLKHSLSIKLATLHYQKKQYKDSLALINDLL 162 (434)
T ss_dssp TSC--HHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSS--CCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred Hcc--chHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHccChHHHHHHHHHHH
Confidence 542 2223345677889999999999999999999999987753 445577889999999999999999999999999
Q ss_pred HHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHH
Q 010446 357 RVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAER 436 (510)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 436 (510)
..... ..+.+....++..++.+|...|++++|..++++++.+..... ..+......+..+|.++...|++++|..
T Consensus 163 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~ 237 (434)
T 4b4t_Q 163 REFKK----LDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIY-CPTQTVAELDLMSGILHCEDKDYKTAFS 237 (434)
T ss_dssp HHHTT----SSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-CCHHHHHHHHHHHHHHTTSSSCHHHHHH
T ss_pred HHHHh----cccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCC-CchHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 88765 355677788999999999999999999999999999877653 2223456788899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 010446 437 LLRICLDIMTKTVGPDD 453 (510)
Q Consensus 437 ~~~~al~~~~~~~~~~~ 453 (510)
+|.++++..........
T Consensus 238 ~~~~a~~~~~~~~~~~~ 254 (434)
T 4b4t_Q 238 YFFESFESYHNLTTHNS 254 (434)
T ss_dssp HHHHHHHHHHHTTTSSC
T ss_pred HHHHHHHHhhhhhhhhh
Confidence 99999998776644443
No 91
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.69 E-value=9e-15 Score=126.74 Aligned_cols=177 Identities=13% Similarity=0.070 Sum_probs=146.5
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCC
Q 010446 245 VTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEN 324 (510)
Q Consensus 245 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 324 (510)
...++.+|..+...|++++|+..|+++++. .++.+....++..+|.+|...|++++|+..|+++++. .|+
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~-----~P~ 73 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNR-----YPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRL-----NPT 73 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-----CcC
Confidence 456888999999999999999999999986 3344555678999999999999999999999999986 355
Q ss_pred ChHHHHHHHHHHHHHHH------------------CCCHHHHHHHHHHHHHHHHhhccCCCCChHHHH------------
Q 010446 325 DGRVGMAMCSLAHAKCA------------------NGNAEEAVELYKKALRVIKDSNYMSLDDSIMEN------------ 374 (510)
Q Consensus 325 ~~~~~~~~~~la~~~~~------------------~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~------------ 374 (510)
++....++..+|.++.. .|++++|+..|+++++.. |+.+....
T Consensus 74 ~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~-------P~~~~a~~a~~~l~~~~~~~ 146 (225)
T 2yhc_A 74 HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGY-------PNSQYTTDATKRLVFLKDRL 146 (225)
T ss_dssp CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTC-------TTCTTHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHC-------cCChhHHHHHHHHHHHHHHH
Confidence 66666788888888875 678999999999998763 33333222
Q ss_pred --HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Q 010446 375 --MRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLD 443 (510)
Q Consensus 375 --~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 443 (510)
....+|.+|...|++++|+..|+++++.. ++.+....++..+|.+|..+|++++|+..++.+..
T Consensus 147 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~ 212 (225)
T 2yhc_A 147 AKYEYSVAEYYTERGAWVAVVNRVEGMLRDY-----PDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAA 212 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-----TTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHC-----cCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHh
Confidence 22568999999999999999999998864 44566678899999999999999999999997766
No 92
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.68 E-value=3.4e-15 Score=125.04 Aligned_cols=173 Identities=16% Similarity=0.098 Sum_probs=148.4
Q ss_pred ChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhc
Q 010446 158 GIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRY 237 (510)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 237 (510)
.......+..+|.++...|++++|+..+++++... |....++..+|.++...|++++|+.+++++++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~---- 72 (186)
T 3as5_A 4 DDIRQVYYRDKGISHAKAGRYSQAVMLLEQVYDAD-------AFDVDVALHLGIAYVKTGAVDRGTELLERSLADA---- 72 (186)
T ss_dssp CCHHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTT-------SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----
T ss_pred cchhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-------ccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC----
Confidence 44567788999999999999999999998876543 2234568899999999999999999999998862
Q ss_pred CCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q 010446 238 GKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIY 317 (510)
Q Consensus 238 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 317 (510)
|....++..+|.++...|++++|+.++++++.. .|.....+..+|.++...|++++|+.++++++...
T Consensus 73 ----~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 140 (186)
T 3as5_A 73 ----PDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEA--------NPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLR 140 (186)
T ss_dssp ----TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ----CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcC
Confidence 344677889999999999999999999999987 34456788999999999999999999999998852
Q ss_pred HHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 010446 318 TKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKD 361 (510)
Q Consensus 318 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 361 (510)
|....++..+|.++...|++++|..+++++++....
T Consensus 141 --------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 176 (186)
T 3as5_A 141 --------PNEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEG 176 (186)
T ss_dssp --------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHC
T ss_pred --------ccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 334578889999999999999999999999988653
No 93
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.68 E-value=4e-15 Score=124.59 Aligned_cols=171 Identities=16% Similarity=0.103 Sum_probs=146.5
Q ss_pred cchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhc
Q 010446 284 ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSN 363 (510)
Q Consensus 284 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 363 (510)
......+..+|.++...|++++|+..++++++. .|....++..+|.++...|++++|..+++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~----- 71 (186)
T 3as5_A 5 DIRQVYYRDKGISHAKAGRYSQAVMLLEQVYDA--------DAFDVDVALHLGIAYVKTGAVDRGTELLERSLAD----- 71 (186)
T ss_dssp CHHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCT--------TSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----
T ss_pred chhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----
Confidence 445678889999999999999999999998763 3344678899999999999999999999999987
Q ss_pred cCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Q 010446 364 YMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLD 443 (510)
Q Consensus 364 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 443 (510)
.++. ..++..+|.++...|++++|..++++++.. .|....++..+|.++...|++++|+.++++++.
T Consensus 72 --~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 138 (186)
T 3as5_A 72 --APDN---VKVATVLGLTYVQVQKYDLAVPLLIKVAEA--------NPINFNVRFRLGVALDNLGRFDEAIDSFKIALG 138 (186)
T ss_dssp --CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred --CCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHh
Confidence 2333 346688999999999999999999999876 234457888999999999999999999999998
Q ss_pred HHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 010446 444 IMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIRE 488 (510)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 488 (510)
. .|....++..+|.++...|++++|..++++++++..
T Consensus 139 ~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 175 (186)
T 3as5_A 139 L--------RPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELDE 175 (186)
T ss_dssp H--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred c--------CccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 5 244567889999999999999999999999998763
No 94
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.68 E-value=1.5e-14 Score=125.34 Aligned_cols=176 Identities=12% Similarity=0.032 Sum_probs=145.3
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCC
Q 010446 204 AILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTES 283 (510)
Q Consensus 204 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 283 (510)
..++.+|..+...|++++|+..|+++++.. ++++....++..+|.+|...|++++|+..|+++++. .+++
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~-----p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~-----~P~~ 74 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRY-----PFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRL-----NPTH 74 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----TTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-----CcCC
Confidence 347899999999999999999999999863 445566788999999999999999999999999987 3345
Q ss_pred cchHHHHHHHHHHHHH------------------cCChHHHHHHHHHHHHHHHHHcCCCChHHHH--------------H
Q 010446 284 ADLVLPLFSLGSLFIK------------------EGKAVDAESVFSRILKIYTKVYGENDGRVGM--------------A 331 (510)
Q Consensus 284 ~~~~~~~~~la~~~~~------------------~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~--------------~ 331 (510)
+....++..+|.++.. .|++++|+..|+++++.. |+++.... .
T Consensus 75 ~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~-----P~~~~a~~a~~~l~~~~~~~~~~ 149 (225)
T 2yhc_A 75 PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGY-----PNSQYTTDATKRLVFLKDRLAKY 149 (225)
T ss_dssp TTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTC-----TTCTTHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHC-----cCChhHHHHHHHHHHHHHHHHHH
Confidence 5555688889988876 578999999999998753 33332222 2
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 010446 332 MCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLL 401 (510)
Q Consensus 332 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 401 (510)
...+|.+|...|++++|+..|+++++. .|+.+....++..+|.++...|++++|+..++++..
T Consensus 150 ~~~~a~~~~~~~~~~~A~~~~~~~l~~-------~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~ 212 (225)
T 2yhc_A 150 EYSVAEYYTERGAWVAVVNRVEGMLRD-------YPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAA 212 (225)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH-------STTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHH-------CcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHh
Confidence 257889999999999999999999988 456666677889999999999999999999987655
No 95
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.67 E-value=1.2e-14 Score=149.15 Aligned_cols=253 Identities=11% Similarity=-0.027 Sum_probs=155.2
Q ss_pred HHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHH
Q 010446 125 VKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDA 204 (510)
Q Consensus 125 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 204 (510)
|..+...|.+++|..+|+++-.. .. .+...+...|++++|.++++++ ....
T Consensus 1056 A~Iai~lglyEEAf~IYkKa~~~-----------~~------A~~VLie~i~nldrAiE~Aerv------------n~p~ 1106 (1630)
T 1xi4_A 1056 ANIAISNELFEEAFAIFRKFDVN-----------TS------AVQVLIEHIGNLDRAYEFAERC------------NEPA 1106 (1630)
T ss_pred HHHHHhCCCHHHHHHHHHHcCCH-----------HH------HHHHHHHHHhhHHHHHHHHHhc------------CCHH
Confidence 56667777778877777775211 10 1111233566667776666643 1133
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCc
Q 010446 205 ILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESA 284 (510)
Q Consensus 205 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 284 (510)
+|+.+|..+...|++++|+..|.++ .....+..+|.++...|++++|++++..+.+..+.
T Consensus 1107 vWsqLAKAql~~G~~kEAIdsYiKA-------------dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e------- 1166 (1630)
T 1xi4_A 1107 VWSQLAKAQLQKGMVKEAIDSYIKA-------------DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE------- 1166 (1630)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHhc-------------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc-------
Confidence 4778888888888888888888665 11345667788888888888888888877765211
Q ss_pred chHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Q 010446 285 DLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNY 364 (510)
Q Consensus 285 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 364 (510)
......+|.+|.+++++++ .+.|. . .+.. ..+..+|..+...|++++|..+|.++-
T Consensus 1167 --~~Idt~LafaYAKl~rlee-le~fI---~---------~~n~-ad~~~iGd~le~eg~YeeA~~~Y~kA~-------- 1222 (1630)
T 1xi4_A 1167 --SYVETELIFALAKTNRLAE-LEEFI---N---------GPNN-AHIQQVGDRCYDEKMYDAAKLLYNNVS-------- 1222 (1630)
T ss_pred --ccccHHHHHHHHhhcCHHH-HHHHH---h---------CCCH-HHHHHHHHHHHhcCCHHHHHHHHHhhh--------
Confidence 1112237777777777764 32221 1 1112 244568888888888888888887752
Q ss_pred CCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Q 010446 365 MSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDI 444 (510)
Q Consensus 365 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 444 (510)
.|..+|.++.+.|++++|++.+++|... .+|...+.++...|++..|..+... +.
T Consensus 1223 ----------ny~rLA~tLvkLge~q~AIEaarKA~n~-------------~aWkev~~acve~~Ef~LA~~cgl~-Ii- 1277 (1630)
T 1xi4_A 1223 ----------NFGRLASTLVHLGEYQAAVDGARKANST-------------RTWKEVCFACVDGKEFRLAQMCGLH-IV- 1277 (1630)
T ss_pred ----------HHHHHHHHHHHhCCHHHHHHHHHHhCCH-------------HHHHHHHHHHhhhhHHHHHHHHHHh-hh-
Confidence 3466788888888888888887776321 4455556666666666666655442 11
Q ss_pred HHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 010446 445 MTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALY 485 (510)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 485 (510)
.+++. +..++..|...|.+++|+.++++++.
T Consensus 1278 -------v~~de---Leeli~yYe~~G~feEAI~LlE~aL~ 1308 (1630)
T 1xi4_A 1278 -------VHADE---LEELINYYQDRGYFEELITMLEAALG 1308 (1630)
T ss_pred -------cCHHH---HHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 12222 34566666777777777777766654
No 96
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.67 E-value=1.3e-15 Score=143.20 Aligned_cols=116 Identities=16% Similarity=0.044 Sum_probs=112.0
Q ss_pred HcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHH
Q 010446 385 IVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLG 464 (510)
Q Consensus 385 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la 464 (510)
..|++++|+.++++++++.++.+|++||.++.++.+||.+|..+|+|++|+.++++++++.++.+|++||+++..+.+||
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHHHHHHHHhcCCCCcchhH
Q 010446 465 ITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPGKL 500 (510)
Q Consensus 465 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 500 (510)
.+|..+|++++|+.+|++|+++.+..+|++||.+.-
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 425 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISE 425 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHH
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 999999999999999999999999999999965543
No 97
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.67 E-value=7.6e-16 Score=155.73 Aligned_cols=200 Identities=15% Similarity=0.150 Sum_probs=163.0
Q ss_pred HHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHH
Q 010446 129 IMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLH 208 (510)
Q Consensus 129 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (510)
...|++++|++.++++++..... .....|..+.++..+|.++...|++++|+..++++++.. |....+++.
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~--~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-------p~~~~a~~~ 472 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDA--DGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERV-------GWRWRLVWY 472 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC---------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-------CCCHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccc--cccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccC-------cchHHHHHH
Confidence 78899999999999998211000 012267788899999999999999999999999999875 334566899
Q ss_pred HHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHH
Q 010446 209 MGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVL 288 (510)
Q Consensus 209 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 288 (510)
+|.++...|++++|+..|++++++. |....++.++|.++...|++++ +..|++++++ .|....
T Consensus 473 lg~~~~~~g~~~~A~~~~~~al~l~--------P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~--------~P~~~~ 535 (681)
T 2pzi_A 473 RAVAELLTGDYDSATKHFTEVLDTF--------PGELAPKLALAATAELAGNTDE-HKFYQTVWST--------NDGVIS 535 (681)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHS--------TTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHH--------CTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhC--------CCChHHHHHHHHHHHHcCChHH-HHHHHHHHHh--------CCchHH
Confidence 9999999999999999999999873 4446788999999999999999 9999999997 566788
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHhh
Q 010446 289 PLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEA-VELYKKALRVIKDS 362 (510)
Q Consensus 289 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~al~~~~~~ 362 (510)
+++++|.++...|++++|+..|++++++ +|....++.++|.++...++.+++ ...++++++.....
T Consensus 536 a~~~lg~~~~~~g~~~~A~~~~~~al~l--------~P~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~l~~~ 602 (681)
T 2pzi_A 536 AAFGLARARSAEGDRVGAVRTLDEVPPT--------SRHFTTARLTSAVTLLSGRSTSEVTEEQIRDAARRVEAL 602 (681)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTSCTT--------STTHHHHHHHHHHHTC-------CCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHhhccc--------CcccHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHhhC
Confidence 9999999999999999999999999874 577788999999999888876666 67778887777654
No 98
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.66 E-value=1.1e-15 Score=154.50 Aligned_cols=199 Identities=14% Similarity=0.035 Sum_probs=158.4
Q ss_pred HhhCChHHHHHHHHHHHHhh-hhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 010446 173 VYIGDLKFVQSLLDMMSGIV-DSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGM 251 (510)
Q Consensus 173 ~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 251 (510)
...|++++|+..+++++... .......|....++..+|.++...|++++|+..|+++++.. |....+++++
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~--------p~~~~a~~~l 473 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERV--------GWRWRLVWYR 473 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH--------CCCHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccC--------cchHHHHHHH
Confidence 78999999999999987211 11112234555668999999999999999999999999863 4447789999
Q ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHH
Q 010446 252 AKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMA 331 (510)
Q Consensus 252 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 331 (510)
|.++...|++++|+..|++++++ .|....++.++|.++...|++++ +..|++++++ +|....+
T Consensus 474 g~~~~~~g~~~~A~~~~~~al~l--------~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~--------~P~~~~a 536 (681)
T 2pzi_A 474 AVAELLTGDYDSATKHFTEVLDT--------FPGELAPKLALAATAELAGNTDE-HKFYQTVWST--------NDGVISA 536 (681)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHH--------STTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHH--------CTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHh--------CCchHHH
Confidence 99999999999999999999998 56668899999999999999999 9999999986 4555678
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHH-HHHHHHHHHHHHHh
Q 010446 332 MCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEG-RELLEECLLITEKY 406 (510)
Q Consensus 332 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~al~~~~~~ 406 (510)
+.++|.++...|++++|+..|++++++ .+....++.++|.++...++.+++ ..-+++++......
T Consensus 537 ~~~lg~~~~~~g~~~~A~~~~~~al~l----------~P~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~l~~~ 602 (681)
T 2pzi_A 537 AFGLARARSAEGDRVGAVRTLDEVPPT----------SRHFTTARLTSAVTLLSGRSTSEVTEEQIRDAARRVEAL 602 (681)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSCTT----------STTHHHHHHHHHHHTC-------CCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHhhccc----------CcccHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHhhC
Confidence 999999999999999999999998876 333456778999999888876665 66777777666554
No 99
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.66 E-value=7.6e-16 Score=123.90 Aligned_cols=147 Identities=12% Similarity=0.007 Sum_probs=121.6
Q ss_pred HHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHH
Q 010446 167 IIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVT 246 (510)
Q Consensus 167 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 246 (510)
.||.++...|++++|+..++++... .|.....++.+|.+|...|++++|+.+|++++++ +|....
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~-------~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~--------~p~~~~ 66 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPS-------PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINV--------QERDPK 66 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCS-------HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHH
T ss_pred HhHHHHHHcChHHHHHHHHHHhccc-------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHH
Confidence 4788889999999999999987644 3677777899999999999999999999999987 355578
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHH-HHHHHHHHHHHcCCCC
Q 010446 247 SLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESV-FSRILKIYTKVYGEND 325 (510)
Q Consensus 247 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~-~~~al~~~~~~~~~~~ 325 (510)
++..+|.+|...|++++|+..|++++++ .|....++.++|.+|...|++++|... +++++++ +
T Consensus 67 a~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l--------~ 130 (150)
T 4ga2_A 67 AHRFLGLLYELEENTDKAVECYRRSVEL--------NPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKL--------F 130 (150)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHH--------S
T ss_pred HHHHHHHHHHHcCchHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHh--------C
Confidence 8999999999999999999999999998 566788999999999999999887765 5899986 2
Q ss_pred hHHHHHHHHHHHHHHHCCC
Q 010446 326 GRVGMAMCSLAHAKCANGN 344 (510)
Q Consensus 326 ~~~~~~~~~la~~~~~~g~ 344 (510)
|....++...+.++...|+
T Consensus 131 P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 131 PGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp TTCHHHHHHHHHHHHTCCC
T ss_pred cCCHHHHHHHHHHHHHhCc
Confidence 4444567777888887775
No 100
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.66 E-value=1.4e-14 Score=118.29 Aligned_cols=157 Identities=15% Similarity=0.135 Sum_probs=137.2
Q ss_pred ChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Q 010446 241 SILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKV 320 (510)
Q Consensus 241 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 320 (510)
.+..+.++..+|.++...|++++|+.++++++++.+... +....+.++..+|.++...|++++|+.++++++.+.+..
T Consensus 5 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 82 (164)
T 3ro3_A 5 RAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG--DKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL 82 (164)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhC--CchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 346678899999999999999999999999999987753 345556789999999999999999999999999998765
Q ss_pred cCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 010446 321 YGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECL 400 (510)
Q Consensus 321 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 400 (510)
.+.+....++.++|.++...|++++|+.++++++...... .++.....++..+|.++...|++++|+.++++++
T Consensus 83 --~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~----~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 156 (164)
T 3ro3_A 83 --KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL----KDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHL 156 (164)
T ss_dssp --TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred --CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc----cchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 2345567889999999999999999999999999998763 4556677888999999999999999999999999
Q ss_pred HHHHH
Q 010446 401 LITEK 405 (510)
Q Consensus 401 ~~~~~ 405 (510)
.+.++
T Consensus 157 ~~~~~ 161 (164)
T 3ro3_A 157 EISRE 161 (164)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 88754
No 101
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.66 E-value=1e-14 Score=119.13 Aligned_cols=157 Identities=18% Similarity=0.174 Sum_probs=137.2
Q ss_pred ChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 010446 325 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITE 404 (510)
Q Consensus 325 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 404 (510)
.+..+.++..+|.++...|++++|+.+++++++..+.. .+......++..+|.++...|++++|+.++++++.+..
T Consensus 5 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 80 (164)
T 3ro3_A 5 RAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF----GDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLAR 80 (164)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH----TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh----CCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 34567889999999999999999999999999998863 45566677889999999999999999999999999987
Q ss_pred HhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 010446 405 KYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEAL 484 (510)
Q Consensus 405 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 484 (510)
.. .+.+....++..+|.++...|++++|+.++++++.+.... .+.+....++..+|.++...|++++|..++++++
T Consensus 81 ~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 156 (164)
T 3ro3_A 81 QL--KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL--KDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHL 156 (164)
T ss_dssp HT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred Hh--CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc--cchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 65 2445567789999999999999999999999999987764 3456677889999999999999999999999999
Q ss_pred HHHHH
Q 010446 485 YIREI 489 (510)
Q Consensus 485 ~~~~~ 489 (510)
++.++
T Consensus 157 ~~~~~ 161 (164)
T 3ro3_A 157 EISRE 161 (164)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 98754
No 102
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.65 E-value=4.6e-15 Score=139.45 Aligned_cols=123 Identities=9% Similarity=0.124 Sum_probs=118.3
Q ss_pred HhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHH
Q 010446 214 STLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSL 293 (510)
Q Consensus 214 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 293 (510)
...|+|++|+.++++++++.++.++++||.++.++.++|.+|..+|+|++|+.++++++++.++..|+++|.++..+++|
T Consensus 309 ~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nL 388 (433)
T 3qww_A 309 KHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKL 388 (433)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred hhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Q 010446 294 GSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLA 336 (510)
Q Consensus 294 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la 336 (510)
|.+|..+|++++|+.++++|+++.+..+|++||.+..+..+|.
T Consensus 389 a~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l~ 431 (433)
T 3qww_A 389 GRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEIE 431 (433)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHh
Confidence 9999999999999999999999999999999999988877764
No 103
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.65 E-value=1.1e-15 Score=122.92 Aligned_cols=147 Identities=15% Similarity=0.097 Sum_probs=121.9
Q ss_pred HHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchH
Q 010446 208 HMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLV 287 (510)
Q Consensus 208 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 287 (510)
.||.++...|++++|+..+++++.. .|.....++.+|.+|...|++++|+.++++++++ .|...
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~--------~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~--------~p~~~ 65 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPS--------PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINV--------QERDP 65 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCS--------HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCH
T ss_pred HhHHHHHHcChHHHHHHHHHHhccc--------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCH
Confidence 4788999999999999999998753 4666778899999999999999999999999998 56778
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHH-HHHHHHHHHhhccCC
Q 010446 288 LPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVEL-YKKALRVIKDSNYMS 366 (510)
Q Consensus 288 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~-~~~al~~~~~~~~~~ 366 (510)
.++..+|.+|...|++++|+..|++++++ +|....++.++|.++...|++++|... +++++++ .
T Consensus 66 ~a~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l-------~ 130 (150)
T 4ga2_A 66 KAHRFLGLLYELEENTDKAVECYRRSVEL--------NPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKL-------F 130 (150)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHH-------S
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHh-------C
Confidence 99999999999999999999999999986 355567899999999999999887665 6899988 4
Q ss_pred CCChHHHHHHHHHHHHHHHcCC
Q 010446 367 LDDSIMENMRIDLAELLHIVGR 388 (510)
Q Consensus 367 ~~~~~~~~~~~~la~~~~~~g~ 388 (510)
|+++. ++...+.++...|+
T Consensus 131 P~~~~---~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 131 PGSPA---VYKLKEQLLDCEGE 149 (150)
T ss_dssp TTCHH---HHHHHHHHHHTCCC
T ss_pred cCCHH---HHHHHHHHHHHhCc
Confidence 55544 45667888887775
No 104
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.65 E-value=2.6e-14 Score=122.08 Aligned_cols=165 Identities=16% Similarity=0.174 Sum_probs=135.6
Q ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHH----------------HHHHHHhhhcHHHHHHH
Q 010446 162 VAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLH----------------MGSMYSTLENYEKSMLV 225 (510)
Q Consensus 162 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------l~~~~~~~g~~~~A~~~ 225 (510)
+..+...|..+...|++++|+..|++++... |....+++. +|.++...|++++|+..
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-------p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~ 76 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALN-------IDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLF 76 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------HHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-------CCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHH
Confidence 4566788999999999999999999998875 555666777 99999999999999999
Q ss_pred HHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCCh--
Q 010446 226 YQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKA-- 303 (510)
Q Consensus 226 ~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~-- 303 (510)
|++++++ +|....++..+|.++...|++++|+.+|++++++ .|....++.++|.+|...|+.
T Consensus 77 ~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~~~~~~ 140 (208)
T 3urz_A 77 YKELLQK--------APNNVDCLEACAEMQVCRGQEKDALRMYEKILQL--------EADNLAANIFLGNYYYLTAEQEK 140 (208)
T ss_dssp HHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHHhHHHH
Confidence 9999986 3555788999999999999999999999999998 567788999999999877653
Q ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 304 VDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 304 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
..+...+.+++. .+....++..+|.++...|++++|+.+|++++++
T Consensus 141 ~~~~~~~~~~~~---------~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 186 (208)
T 3urz_A 141 KKLETDYKKLSS---------PTKMQYARYRDGLSKLFTTRYEKARNSLQKVILR 186 (208)
T ss_dssp HHHHHHHC---C---------CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhC---------CCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 344555554432 2223346778899999999999999999999987
No 105
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.64 E-value=1.9e-14 Score=122.87 Aligned_cols=165 Identities=11% Similarity=0.135 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHH----------------HHHHHHhhCChHHH
Q 010446 118 LLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDI----------------IALGYVYIGDLKFV 181 (510)
Q Consensus 118 ~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~----------------l~~~~~~~g~~~~A 181 (510)
...++..|..+...|++++|+..|++++.. .|..+.++.. +|.++...|++++|
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~----------~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A 73 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIAL----------NIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKA 73 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh----------CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHH
Confidence 345778899999999999999999999998 8888888888 99999999999999
Q ss_pred HHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCH
Q 010446 182 QSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRA 261 (510)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 261 (510)
+..+++++++. |....++..+|.++...|++++|+..|++++++ +|....++.++|.+|...|+.
T Consensus 74 ~~~~~~al~~~-------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 74 YLFYKELLQKA-------PNNVDCLEACAEMQVCRGQEKDALRMYEKILQL--------EADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHHhHH
Confidence 99999999875 444566899999999999999999999999987 355577899999999877654
Q ss_pred --HHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 262 --KKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKI 316 (510)
Q Consensus 262 --~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 316 (510)
..+...+.+++. .+....+++.+|.++...|++++|+.+|++++++
T Consensus 139 ~~~~~~~~~~~~~~---------~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 186 (208)
T 3urz_A 139 EKKKLETDYKKLSS---------PTKMQYARYRDGLSKLFTTRYEKARNSLQKVILR 186 (208)
T ss_dssp HHHHHHHHHC---C---------CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhC---------CCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 344555554431 2223346778899999999999999999999985
No 106
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.62 E-value=2e-13 Score=140.41 Aligned_cols=295 Identities=14% Similarity=0.077 Sum_probs=171.0
Q ss_pred HHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHH
Q 010446 126 KSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAI 205 (510)
Q Consensus 126 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
..|-+.+.+.+|...+-+.+..+.+..... .....+.+|..+|.++...|++++|+..|.++ ++ ...
T Consensus 1070 ~IYkKa~~~~~A~~VLie~i~nldrAiE~A-ervn~p~vWsqLAKAql~~G~~kEAIdsYiKA---------dD---~sa 1136 (1630)
T 1xi4_A 1070 AIFRKFDVNTSAVQVLIEHIGNLDRAYEFA-ERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA---------DD---PSS 1136 (1630)
T ss_pred HHHHHcCCHHHHHHHHHHHHhhHHHHHHHH-HhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc---------CC---hHH
Confidence 344445555555444443332222211000 02244788999999999999999999999774 11 233
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcc
Q 010446 206 LLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESAD 285 (510)
Q Consensus 206 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 285 (510)
+..+|.++...|++++|+++|..+.+..+. + .+...+|.+|.+.+++++.. .|.+ .+.
T Consensus 1137 y~eVa~~~~~lGkyEEAIeyL~mArk~~~e------~---~Idt~LafaYAKl~rleele-~fI~------------~~n 1194 (1630)
T 1xi4_A 1137 YMEVVQAANTSGNWEELVKYLQMARKKARE------S---YVETELIFALAKTNRLAELE-EFIN------------GPN 1194 (1630)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhccc------c---cccHHHHHHHHhhcCHHHHH-HHHh------------CCC
Confidence 778999999999999999999988765311 0 01113666666666665322 2210 111
Q ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH--hh-
Q 010446 286 LVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIK--DS- 362 (510)
Q Consensus 286 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~--~~- 362 (510)
...+..+|..+...|+|++|..+|.++ ..|..++.++.+.|++++|++.++++..... +.
T Consensus 1195 -~ad~~~iGd~le~eg~YeeA~~~Y~kA----------------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~ 1257 (1630)
T 1xi4_A 1195 -NAHIQQVGDRCYDEKMYDAAKLLYNNV----------------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVC 1257 (1630)
T ss_pred -HHHHHHHHHHHHhcCCHHHHHHHHHhh----------------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHH
Confidence 123445666666666666666666654 1345566666666666666666665532210 00
Q ss_pred ------------ccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHh--c
Q 010446 363 ------------NYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSR--S 428 (510)
Q Consensus 363 ------------~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~--~ 428 (510)
...+.........+..++..|...|.+++|+.++++++.+- +.....+..+|.+|.+ .
T Consensus 1258 ~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~Le--------raH~gmftELaiLyaKy~p 1329 (1630)
T 1xi4_A 1258 FACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLE--------RAHMGMFTELAILYSKFKP 1329 (1630)
T ss_pred HHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccC--------hhHhHHHHHHHHHHHhCCH
Confidence 00000000011233567778888888888888888887642 3344556566666654 4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 010446 429 KNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEA 483 (510)
Q Consensus 429 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 483 (510)
++..+++++|...+.+-+-. .--.....|..+..+|.+-|+++.|.....+.
T Consensus 1330 eklmEhlk~f~~rini~k~~---r~~e~~~lW~elv~LY~~~~e~dnA~~tm~~h 1381 (1630)
T 1xi4_A 1330 QKMREHLELFWSRVNIPKVL---RAAEQAHLWAELVFLYDKYEEYDNAIITMMNH 1381 (1630)
T ss_pred HHHHHHHHHHHHhcccchHh---HHHHHHHHHHHHHHHHHhcccHHHHHHHHHhc
Confidence 56666777776655531100 01133456788888999999999998544433
No 107
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.62 E-value=1e-14 Score=137.61 Aligned_cols=133 Identities=14% Similarity=0.042 Sum_probs=124.1
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHH
Q 010446 336 AHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFV 415 (510)
Q Consensus 336 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 415 (510)
..-+..+|++++|+..+++++++..+. ++++++.++.++.++|.+|..+|++++|+.++++++.+.++.+|++||.++
T Consensus 294 ie~~~~~g~~~~a~~~~~~~L~~~~~~--lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a 371 (429)
T 3qwp_A 294 IEELKAHWKWEQVLAMCQAIISSNSER--LPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRG 371 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTCSSCC--CCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHH
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccCc--CCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHH
Confidence 334567899999999999999887664 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhc
Q 010446 416 THLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHL 470 (510)
Q Consensus 416 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~ 470 (510)
..+++||.+|..+|++++|+.+|++|+++.+..+|++||.+..++.+|+.+...+
T Consensus 372 ~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 372 VQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998887643
No 108
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.62 E-value=1.1e-14 Score=137.39 Aligned_cols=132 Identities=12% Similarity=0.079 Sum_probs=125.6
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHH
Q 010446 210 GSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLP 289 (510)
Q Consensus 210 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 289 (510)
..-+..+|++++|+..+++++++..+.++++++..+.++.++|.+|..+|+|++|+.++++++++.++..|+++|.++..
T Consensus 294 ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~ 373 (429)
T 3qwp_A 294 IEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQ 373 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHH
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHH
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH
Q 010446 290 LFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA 341 (510)
Q Consensus 290 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~ 341 (510)
+++||.+|..+|++++|+.++++|+++.+..+|++||.+..++.+|+.+...
T Consensus 374 l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 374 VMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDAN 425 (429)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999887654
No 109
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.59 E-value=1.5e-15 Score=139.90 Aligned_cols=273 Identities=12% Similarity=-0.014 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCc
Q 010446 120 ELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDE 199 (510)
Q Consensus 120 ~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 199 (510)
.+...|..+...|++++|++.|.++ ..+..+..++..+...|++++|+.+++.+.+..
T Consensus 34 vWs~La~A~l~~g~~~eAIdsfika---------------~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~------- 91 (449)
T 1b89_A 34 VWSQLAKAQLQKGMVKEAIDSYIKA---------------DDPSSYMEVVQAANTSGNWEELVKYLQMARKKA------- 91 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHcC---------------CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhC-------
Confidence 3566888899999999999999753 234477788888888999999999888877632
Q ss_pred hHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhc
Q 010446 200 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNR 279 (510)
Q Consensus 200 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 279 (510)
+. ..+...++.+|.+.|++.++.++++. |. ..++..+|..+...|+|++|..+|.++
T Consensus 92 ~~-~~i~~~Li~~Y~Klg~l~e~e~f~~~-------------pn-~~a~~~IGd~~~~~g~yeeA~~~Y~~a-------- 148 (449)
T 1b89_A 92 RE-SYVETELIFALAKTNRLAELEEFING-------------PN-NAHIQQVGDRCYDEKMYDAAKLLYNNV-------- 148 (449)
T ss_dssp ------------------CHHHHTTTTTC-------------C-----------------CTTTHHHHHHHT--------
T ss_pred cc-chhHHHHHHHHHHhCCHHHHHHHHcC-------------Cc-HHHHHHHHHHHHHcCCHHHHHHHHHHh--------
Confidence 11 23367788899999999998877742 21 238899999999999999999999865
Q ss_pred CCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 010446 280 GTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 359 (510)
Q Consensus 280 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 359 (510)
..+..+|.++.++|++++|++.++++. + ..+|..++.++...|+++.|..+....
T Consensus 149 --------~n~~~LA~~L~~Lg~yq~AVea~~KA~----------~---~~~Wk~v~~aCv~~~ef~lA~~~~l~L---- 203 (449)
T 1b89_A 149 --------SNFGRLASTLVHLGEYQAAVDGARKAN----------S---TRTWKEVCFACVDGKEFRLAQMCGLHI---- 203 (449)
T ss_dssp --------TCHHHHHHHHHTTTCHHHHHHHHHHHT----------C---HHHHHHHHHHHHHTTCHHHHHHTTTTT----
T ss_pred --------hhHHHHHHHHHHhccHHHHHHHHHHcC----------C---chhHHHHHHHHHHcCcHHHHHHHHHHH----
Confidence 357789999999999999999999882 1 256788889999999999996655431
Q ss_pred HhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHh--ccCHHHHHHH
Q 010446 360 KDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSR--SKNFVEAERL 437 (510)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~--~g~~~~A~~~ 437 (510)
. .++.. ...++..|.+.|++++|+.++++++.+- +....++..+|.+|.+ .++..++++.
T Consensus 204 ------~-~~ad~---l~~lv~~Yek~G~~eEai~lLe~aL~le--------~ah~~~ftel~il~~ky~p~k~~ehl~~ 265 (449)
T 1b89_A 204 ------V-VHADE---LEELINYYQDRGYFEELITMLEAALGLE--------RAHMGMFTELAILYSKFKPQKMREHLEL 265 (449)
T ss_dssp ------T-TCHHH---HHHHHHHHHHTTCHHHHHHHHHHHTTST--------TCCHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ------H-hCHhh---HHHHHHHHHHCCCHHHHHHHHHHHhCCc--------HHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 1 12222 2458889999999999999999988642 3345667777777764 4566677777
Q ss_pred HHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 010446 438 LRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEA 483 (510)
Q Consensus 438 ~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 483 (510)
|...+.+-+-.- --.....|..+.-+|...++++.|.....+.
T Consensus 266 ~~~~ini~k~~~---~~~~~~~w~e~~~ly~~~~e~d~A~~tm~~h 308 (449)
T 1b89_A 266 FWSRVNIPKVLR---AAEQAHLWAELVFLYDKYEEYDNAIITMMNH 308 (449)
T ss_dssp HSTTSCHHHHHH---HHHTTTCHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHhcCcHHHH---HHHHHHHHHHHHHHHHhhchHHHHHHHHHhC
Confidence 665554422100 0023456788899999999999998765443
No 110
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.57 E-value=9e-14 Score=107.83 Aligned_cols=117 Identities=13% Similarity=0.133 Sum_probs=102.4
Q ss_pred CchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH
Q 010446 198 DEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILEL 277 (510)
Q Consensus 198 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 277 (510)
-+|..+..+.++|..++..|++++|+..|++++++ +|....++.++|.+|..+|++++|+..+++++++
T Consensus 8 inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--- 76 (126)
T 4gco_A 8 INPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR--------DPENAILYSNRAACLTKLMEFQRALDDCDTCIRL--- 76 (126)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred HCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh---
Confidence 45888999999999999999999999999999986 3555788999999999999999999999999998
Q ss_pred hcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHH
Q 010446 278 NRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHA 338 (510)
Q Consensus 278 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~ 338 (510)
.|....++.++|.++..+|++++|+..|++++++ +|....++.+++.+
T Consensus 77 -----~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l--------~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 77 -----DSKFIKGYIRKAACLVAMREWSKAQRAYEDALQV--------DPSNEEAREGVRNC 124 (126)
T ss_dssp -----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHH
T ss_pred -----hhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--------CcCCHHHHHHHHHh
Confidence 5667889999999999999999999999999996 34444566666654
No 111
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.56 E-value=1.4e-13 Score=106.67 Aligned_cols=116 Identities=13% Similarity=0.050 Sum_probs=101.8
Q ss_pred ChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Q 010446 241 SILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKV 320 (510)
Q Consensus 241 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 320 (510)
+|..+..+.++|..|+..|+|++|+..|++++++ .|....++.++|.+|..+|++++|+..+++++++
T Consensus 9 nP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---- 76 (126)
T 4gco_A 9 NPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR--------DPENAILYSNRAACLTKLMEFQRALDDCDTCIRL---- 76 (126)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh----
Confidence 5888999999999999999999999999999987 5667889999999999999999999999999986
Q ss_pred cCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHH
Q 010446 321 YGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAEL 382 (510)
Q Consensus 321 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~ 382 (510)
+|....++.++|.++...|++++|+..|++++++ .|++.. ++..++.+
T Consensus 77 ----~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l-------~P~~~~---a~~~l~~~ 124 (126)
T 4gco_A 77 ----DSKFIKGYIRKAACLVAMREWSKAQRAYEDALQV-------DPSNEE---AREGVRNC 124 (126)
T ss_dssp ----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------CTTCHH---HHHHHHHH
T ss_pred ----hhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-------CcCCHH---HHHHHHHh
Confidence 3555678999999999999999999999999998 444443 44556654
No 112
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.55 E-value=1.2e-12 Score=117.00 Aligned_cols=252 Identities=6% Similarity=-0.113 Sum_probs=198.4
Q ss_pred HHHHHHHHHHHHHHcCCh-hHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhC--ChHHHHHHHHHHHHhhh
Q 010446 117 QLLELFNEVKSMIMMGNK-NDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIG--DLKFVQSLLDMMSGIVD 193 (510)
Q Consensus 117 ~~~~l~~~~~~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g--~~~~A~~~~~~~~~~~~ 193 (510)
+...++.........|.+ ++|+..+.+++.+ .|+...+++..+.++...| ++++++..++.++...
T Consensus 31 ~y~~~~~~~~a~~~~~e~s~~aL~~t~~~L~~----------nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~n- 99 (306)
T 3dra_A 31 DYKQIMGLLLALMKAEEYSERALHITELGINE----------LASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDN- 99 (306)
T ss_dssp HHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHH----------CTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH----------CcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHC-
Confidence 344456666666777777 5899999999999 9999999999999999999 9999999999998764
Q ss_pred hcCCCchHHHHHHHHHHHHH----Hhh---hcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHH--HH
Q 010446 194 SLKDDEPLLDAILLHMGSMY----STL---ENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAK--KA 264 (510)
Q Consensus 194 ~~~~~~~~~~~~~~~l~~~~----~~~---g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~--~A 264 (510)
|....+++..+.++ ... +++++++.++.++++. +|....++...+.+....|.++ ++
T Consensus 100 ------Pk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~--------~pkny~aW~~R~~vl~~l~~~~~~~E 165 (306)
T 3dra_A 100 ------EKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSS--------DPKNHHVWSYRKWLVDTFDLHNDAKE 165 (306)
T ss_dssp ------TTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCTTCHHH
T ss_pred ------cccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhcccChHHH
Confidence 44445577777777 555 7899999999999985 3566788999999999999998 99
Q ss_pred HHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCC------hHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHH
Q 010446 265 VEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGK------AVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHA 338 (510)
Q Consensus 265 ~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~ 338 (510)
++++.++++. ++....+++..+.+....|+ ++++++++.+++.. +|....+++.++.+
T Consensus 166 L~~~~~~i~~--------d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~--------~p~n~SaW~y~~~l 229 (306)
T 3dra_A 166 LSFVDKVIDT--------DLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVK--------CPQNPSTWNYLLGI 229 (306)
T ss_dssp HHHHHHHHHH--------CTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHH--------CSSCHHHHHHHHHH
T ss_pred HHHHHHHHHh--------CCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHh--------CCCCccHHHHHHHH
Confidence 9999999987 66778899999999999887 89999999999885 46666889999999
Q ss_pred HHHCCCHHH-HHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHH
Q 010446 339 KCANGNAEE-AVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTH 417 (510)
Q Consensus 339 ~~~~g~~~~-A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 417 (510)
+...|+..+ ...+..+++... ...+....++..++.++.+.|+.++|+++|+.+.+. .+|.....
T Consensus 230 l~~~~~~~~~~~~~~~~~~~~~-------~~~~~s~~al~~la~~~~~~~~~~~A~~~~~~l~~~-------~Dpir~~y 295 (306)
T 3dra_A 230 HERFDRSITQLEEFSLQFVDLE-------KDQVTSSFALETLAKIYTQQKKYNESRTVYDLLKSK-------YNPIRSNF 295 (306)
T ss_dssp HHHTTCCGGGGHHHHHTTEEGG-------GTEESCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-------TCGGGHHH
T ss_pred HHhcCCChHHHHHHHHHHHhcc-------CCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhc-------cChHHHHH
Confidence 999998554 334555544431 011222346688999999999999999999997652 24555555
Q ss_pred HHHHHH
Q 010446 418 LLNLAA 423 (510)
Q Consensus 418 ~~~la~ 423 (510)
+...+.
T Consensus 296 W~~~~~ 301 (306)
T 3dra_A 296 WDYQIS 301 (306)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555443
No 113
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.55 E-value=7.3e-15 Score=135.34 Aligned_cols=258 Identities=15% Similarity=0.056 Sum_probs=110.6
Q ss_pred HHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHH
Q 010446 129 IMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLH 208 (510)
Q Consensus 129 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (510)
-..|+.++|.+++++. +.+.+|..+|.++...|++++|+..|.++. + ...+..
T Consensus 14 ~~~~~ld~A~~fae~~---------------~~~~vWs~La~A~l~~g~~~eAIdsfika~-----------D-~~~y~~ 66 (449)
T 1b89_A 14 EHIGNLDRAYEFAERC---------------NEPAVWSQLAKAQLQKGMVKEAIDSYIKAD-----------D-PSSYME 66 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHccCHHHHHHHHHhC---------------CChHHHHHHHHHHHHcCCHHHHHHHHHcCC-----------C-HHHHHH
Confidence 3567788888888875 123589999999999999999999997631 1 124678
Q ss_pred HHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHH
Q 010446 209 MGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVL 288 (510)
Q Consensus 209 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 288 (510)
++..+...|++++|+.+++.+.+.. +. ..+...++.+|.+.|++.+++++++. |. ..
T Consensus 67 V~~~ae~~g~~EeAi~yl~~ark~~--------~~-~~i~~~Li~~Y~Klg~l~e~e~f~~~-------------pn-~~ 123 (449)
T 1b89_A 67 VVQAANTSGNWEELVKYLQMARKKA--------RE-SYVETELIFALAKTNRLAELEEFING-------------PN-NA 123 (449)
T ss_dssp ---------------------------------------------------CHHHHTTTTTC-------------C----
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHhC--------cc-chhHHHHHHHHHHhCCHHHHHHHHcC-------------Cc-HH
Confidence 8888999999999999999887631 11 34566789999999999999877741 22 24
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCC
Q 010446 289 PLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLD 368 (510)
Q Consensus 289 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 368 (510)
++..+|..+...|++++|..+|.++ ..+..+|.++.+.|++++|++.++++..
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a----------------~n~~~LA~~L~~Lg~yq~AVea~~KA~~----------- 176 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV----------------SNFGRLASTLVHLGEYQAAVDGARKANS----------- 176 (449)
T ss_dssp -------------CTTTHHHHHHHT----------------TCHHHHHHHHHTTTCHHHHHHHHHHHTC-----------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh----------------hhHHHHHHHHHHhccHHHHHHHHHHcCC-----------
Confidence 8999999999999999999999966 2467899999999999999999999821
Q ss_pred ChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Q 010446 369 DSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKT 448 (510)
Q Consensus 369 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 448 (510)
..+|..++.++...|+++.|..+..... .+|+. ...++.+|.+.|++++|+.++++++.+
T Consensus 177 ----~~~Wk~v~~aCv~~~ef~lA~~~~l~L~---------~~ad~---l~~lv~~Yek~G~~eEai~lLe~aL~l---- 236 (449)
T 1b89_A 177 ----TRTWKEVCFACVDGKEFRLAQMCGLHIV---------VHADE---LEELINYYQDRGYFEELITMLEAALGL---- 236 (449)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHTTTTTT---------TCHHH---HHHHHHHHHHTTCHHHHHHHHHHHTTS----
T ss_pred ----chhHHHHHHHHHHcCcHHHHHHHHHHHH---------hCHhh---HHHHHHHHHHCCCHHHHHHHHHHHhCC----
Confidence 2466788999999999999966554311 34444 335888999999999999999999873
Q ss_pred hCCCChhhHHHHHHHHHHHHh--cCChHHHHHHHHHHHHHH
Q 010446 449 VGPDDQSISFPMLHLGITLYH--LNRDKEAEKLVLEALYIR 487 (510)
Q Consensus 449 ~~~~~~~~~~~~~~la~~~~~--~g~~~~A~~~~~~al~~~ 487 (510)
.+....++..+|.+|.+ .|+..++++.|...+.+-
T Consensus 237 ----e~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~ 273 (449)
T 1b89_A 237 ----ERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIP 273 (449)
T ss_dssp ----TTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHH
T ss_pred ----cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCc
Confidence 24455667777777764 455566666665544443
No 114
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.55 E-value=1.8e-13 Score=117.16 Aligned_cols=176 Identities=13% Similarity=0.113 Sum_probs=143.9
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHH
Q 010446 135 NDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYS 214 (510)
Q Consensus 135 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 214 (510)
.+|+.+|+++.+. ..+.+++.+|.+|...+++++|+.+|+++... .+ ..+++.+|.+|.
T Consensus 3 ~eA~~~~~~aa~~------------g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~------g~---~~a~~~lg~~y~ 61 (212)
T 3rjv_A 3 TEPGSQYQQQAEA------------GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ------GD---GDALALLAQLKI 61 (212)
T ss_dssp -CTTHHHHHHHHT------------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT------TC---HHHHHHHHHHTT
T ss_pred chHHHHHHHHHHC------------CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc------CC---HHHHHHHHHHHH
Confidence 3567777777642 45778999999999999999999999998753 12 345889999999
Q ss_pred hhh----cHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhh----cCCHHHHHHHHHHHHHHHHHhcCCCCc-c
Q 010446 215 TLE----NYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGS----IGRAKKAVEIYHRVITILELNRGTESA-D 285 (510)
Q Consensus 215 ~~g----~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~-~ 285 (510)
. + ++++|+.+|+++.+. ....+++++|.+|.. .+++++|+.+|+++.+. .+. .
T Consensus 62 ~-~g~~~~~~~A~~~~~~A~~~----------g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-------~~~~~ 123 (212)
T 3rjv_A 62 R-NPQQADYPQARQLAEKAVEA----------GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARD-------SESDA 123 (212)
T ss_dssp S-STTSCCHHHHHHHHHHHHHT----------TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSS-------TTSHH
T ss_pred c-CCCCCCHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHc-------CCCcc
Confidence 8 7 999999999999652 235688999999998 89999999999999864 111 3
Q ss_pred hHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHC-C-----CHHHHHHHHHHH
Q 010446 286 LVLPLFSLGSLFIK----EGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCAN-G-----NAEEAVELYKKA 355 (510)
Q Consensus 286 ~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~-g-----~~~~A~~~~~~a 355 (510)
...++++||.+|.. .+++++|+.+|+++.+. +.+ ..++.+||.+|... | ++++|+.+|+++
T Consensus 124 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~------~~~---~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A 194 (212)
T 3rjv_A 124 AVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL------SRT---GYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVS 194 (212)
T ss_dssp HHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT------SCT---THHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc------CCC---HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 47899999999999 88999999999999873 122 24788999999864 3 899999999999
Q ss_pred HHH
Q 010446 356 LRV 358 (510)
Q Consensus 356 l~~ 358 (510)
.+.
T Consensus 195 ~~~ 197 (212)
T 3rjv_A 195 CLE 197 (212)
T ss_dssp HHH
T ss_pred HHc
Confidence 886
No 115
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.54 E-value=3e-13 Score=121.72 Aligned_cols=165 Identities=12% Similarity=0.035 Sum_probs=143.7
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCC
Q 010446 119 LELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDD 198 (510)
Q Consensus 119 ~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 198 (510)
..++..+..+...|++++|+..|+++++. .|..+.++..+|.++...|++++|+..++++....
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~----------~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~------ 181 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQL----------SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQD------ 181 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGG------
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHh----------CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhh------
Confidence 44778899999999999999999999998 88888999999999999999999999999886553
Q ss_pred chHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHh
Q 010446 199 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELN 278 (510)
Q Consensus 199 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 278 (510)
|.........+..+...++.++|+..+++++.. .|....++.++|.++...|++++|+..++++++.
T Consensus 182 -p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~--------~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~---- 248 (287)
T 3qou_A 182 -QDTRYQGLVAQIELLXQAADTPEIQQLQQQVAE--------NPEDAALATQLALQLHQVGRNEEALELLFGHLRX---- 248 (287)
T ss_dssp -CSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred -cchHHHHHHHHHHHHhhcccCccHHHHHHHHhc--------CCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhc----
Confidence 223334566777788899999999999999886 3556778999999999999999999999999997
Q ss_pred cCCCCcch--HHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 279 RGTESADL--VLPLFSLGSLFIKEGKAVDAESVFSRILKI 316 (510)
Q Consensus 279 ~~~~~~~~--~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 316 (510)
+|.. ..++.+++.++...|+.++|...|++++..
T Consensus 249 ----~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 249 ----DLTAADGQTRXTFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp ----CTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred ----ccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 3444 778999999999999999999999999874
No 116
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.54 E-value=4e-13 Score=114.94 Aligned_cols=177 Identities=14% Similarity=0.022 Sum_probs=143.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHH
Q 010446 220 EKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIK 299 (510)
Q Consensus 220 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~ 299 (510)
.+|+.+|+++.+. ....+++.+|.+|...+++++|+.+|+++.+. ....+++++|.+|..
T Consensus 3 ~eA~~~~~~aa~~----------g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----------g~~~a~~~lg~~y~~ 62 (212)
T 3rjv_A 3 TEPGSQYQQQAEA----------GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ----------GDGDALALLAQLKIR 62 (212)
T ss_dssp -CTTHHHHHHHHT----------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT----------TCHHHHHHHHHHTTS
T ss_pred chHHHHHHHHHHC----------CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHc
Confidence 3577788887753 23578899999999999999999999999764 236789999999998
Q ss_pred cC----ChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHhhccCCCCChH
Q 010446 300 EG----KAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA----NGNAEEAVELYKKALRVIKDSNYMSLDDSI 371 (510)
Q Consensus 300 ~g----~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 371 (510)
+ ++++|+.+|+++.+. . ...++.++|.+|.. .+++++|+.+|+++.+. ++ ...
T Consensus 63 -~g~~~~~~~A~~~~~~A~~~-------g---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-------~~-~~~ 123 (212)
T 3rjv_A 63 -NPQQADYPQARQLAEKAVEA-------G---SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARD-------SE-SDA 123 (212)
T ss_dssp -STTSCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSS-------TT-SHH
T ss_pred -CCCCCCHHHHHHHHHHHHHC-------C---CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHc-------CC-Ccc
Confidence 7 899999999999652 2 34678899999988 89999999999998865 21 113
Q ss_pred HHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhc-c-----CHHHHHHHHHHH
Q 010446 372 MENMRIDLAELLHI----VGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRS-K-----NFVEAERLLRIC 441 (510)
Q Consensus 372 ~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~-g-----~~~~A~~~~~~a 441 (510)
...++.+||.+|.. .+++++|+.+|+++.+. +....++.+||.+|... | ++++|+.+|+++
T Consensus 124 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~---------~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A 194 (212)
T 3rjv_A 124 AVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL---------SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVS 194 (212)
T ss_dssp HHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT---------SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc---------CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 35677999999999 88999999999999764 11234788999999864 3 899999999999
Q ss_pred HHH
Q 010446 442 LDI 444 (510)
Q Consensus 442 l~~ 444 (510)
.+.
T Consensus 195 ~~~ 197 (212)
T 3rjv_A 195 CLE 197 (212)
T ss_dssp HHH
T ss_pred HHc
Confidence 884
No 117
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.54 E-value=2.9e-13 Score=121.75 Aligned_cols=169 Identities=15% Similarity=0.033 Sum_probs=143.8
Q ss_pred cchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhc
Q 010446 284 ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSN 363 (510)
Q Consensus 284 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 363 (510)
|.....+..+|..+...|++++|+..|++++.. +|....++..+|.++...|++++|+..+++++..
T Consensus 114 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~----- 180 (287)
T 3qou_A 114 PREEELXAQQAMQLMQESNYTDALPLLXDAWQL--------SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQ----- 180 (287)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGG-----
T ss_pred CCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHh--------CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchh-----
Confidence 445677889999999999999999999999986 3555678999999999999999999999998765
Q ss_pred cCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Q 010446 364 YMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLD 443 (510)
Q Consensus 364 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 443 (510)
.++. .......+..+...++.++|+..+++++.. .|....++..+|.+|...|++++|+..|++++.
T Consensus 181 --~p~~---~~~~~~~~~~l~~~~~~~~a~~~l~~al~~--------~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~ 247 (287)
T 3qou_A 181 --DQDT---RYQGLVAQIELLXQAADTPEIQQLQQQVAE--------NPEDAALATQLALQLHQVGRNEEALELLFGHLR 247 (287)
T ss_dssp --GCSH---HHHHHHHHHHHHHHHTSCHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred --hcch---HHHHHHHHHHHHhhcccCccHHHHHHHHhc--------CCccHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 2322 234456677788889999999999999885 466678899999999999999999999999998
Q ss_pred HHHHHhCCCChhh--HHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 010446 444 IMTKTVGPDDQSI--SFPMLHLGITLYHLNRDKEAEKLVLEALYI 486 (510)
Q Consensus 444 ~~~~~~~~~~~~~--~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 486 (510)
. +|.. ..++..++.++...|+.++|...|++++..
T Consensus 248 ~--------~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 248 X--------DLTAADGQTRXTFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp H--------CTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred c--------ccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 5 3444 678899999999999999999999999874
No 118
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.53 E-value=1e-13 Score=114.92 Aligned_cols=162 Identities=11% Similarity=0.090 Sum_probs=132.2
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCch
Q 010446 121 LFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEP 200 (510)
Q Consensus 121 l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 200 (510)
++..+..+...|++++|+..++++++. .|..+.++..+|.++...|++++|+..+++++... + .+
T Consensus 9 ~~~~a~~~~~~g~~~~A~~~~~~al~~----------~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~----p-~~ 73 (176)
T 2r5s_A 9 LLKQVSELLQQGEHAQALNVIQTLSDE----------LQSRGDVKLAKADCLLETKQFELAQELLATIPLEY----Q-DN 73 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSCHH----------HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGG----C-CH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH----------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhcc----C-Ch
Confidence 667888999999999999999999988 88889999999999999999999999999876653 2 33
Q ss_pred HHHHHHHHHHHHH-HhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhc
Q 010446 201 LLDAILLHMGSMY-STLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNR 279 (510)
Q Consensus 201 ~~~~~~~~l~~~~-~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 279 (510)
.. ...++.+. ...++..+|+..++++++. .|....++..+|.++...|++++|+..++++++.
T Consensus 74 ~~---~~~~~~~~~~~~~~~~~a~~~~~~al~~--------~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~----- 137 (176)
T 2r5s_A 74 SY---KSLIAKLELHQQAAESPELKRLEQELAA--------NPDNFELACELAVQYNQVGRDEEALELLWNILKV----- 137 (176)
T ss_dssp HH---HHHHHHHHHHHHHTSCHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-----
T ss_pred HH---HHHHHHHHHHhhcccchHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHh-----
Confidence 32 23333332 2334455688999999875 3555678999999999999999999999999876
Q ss_pred CCCCcc--hHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 280 GTESAD--LVLPLFSLGSLFIKEGKAVDAESVFSRILKI 316 (510)
Q Consensus 280 ~~~~~~--~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 316 (510)
.|. ...++..+|.++...|+.++|+..|++++..
T Consensus 138 ---~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~~ 173 (176)
T 2r5s_A 138 ---NLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLYS 173 (176)
T ss_dssp ---CTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred ---CcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 332 2568899999999999999999999998864
No 119
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.53 E-value=1.3e-13 Score=114.35 Aligned_cols=165 Identities=19% Similarity=0.074 Sum_probs=132.2
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCC
Q 010446 287 VLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMS 366 (510)
Q Consensus 287 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 366 (510)
...+..+|..+...|++++|+..++++++. +|....++..+|.++...|++++|+..+++++.. .
T Consensus 6 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~-------~ 70 (176)
T 2r5s_A 6 DEQLLKQVSELLQQGEHAQALNVIQTLSDE--------LQSRGDVKLAKADCLLETKQFELAQELLATIPLE-------Y 70 (176)
T ss_dssp CTTHHHHHHHHHHTTCHHHHHHHHHTSCHH--------HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGG-------G
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhc-------c
Confidence 456778999999999999999999999986 3556688999999999999999999999998765 2
Q ss_pred CCChHHHHHHHHHHHHH-HHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Q 010446 367 LDDSIMENMRIDLAELL-HIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIM 445 (510)
Q Consensus 367 ~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 445 (510)
| .+.. ...++.+. ...++..+|+..+++++.. .|....++..+|.++...|++++|+..|++++..
T Consensus 71 p-~~~~---~~~~~~~~~~~~~~~~~a~~~~~~al~~--------~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~- 137 (176)
T 2r5s_A 71 Q-DNSY---KSLIAKLELHQQAAESPELKRLEQELAA--------NPDNFELACELAVQYNQVGRDEEALELLWNILKV- 137 (176)
T ss_dssp C-CHHH---HHHHHHHHHHHHHTSCHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-
T ss_pred C-ChHH---HHHHHHHHHHhhcccchHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHh-
Confidence 3 3322 22233332 2334455689999998875 3556688999999999999999999999999873
Q ss_pred HHHhCCCChh--hHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 010446 446 TKTVGPDDQS--ISFPMLHLGITLYHLNRDKEAEKLVLEALYI 486 (510)
Q Consensus 446 ~~~~~~~~~~--~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 486 (510)
+|. ...++..++.++..+|+.++|...|++++..
T Consensus 138 -------~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~~ 173 (176)
T 2r5s_A 138 -------NLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLYS 173 (176)
T ss_dssp -------CTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred -------CcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 333 2457899999999999999999999998864
No 120
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.52 E-value=9.1e-12 Score=111.29 Aligned_cols=239 Identities=9% Similarity=-0.047 Sum_probs=189.6
Q ss_pred HhhCCh-HHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhh--cHHHHHHHHHHHHHHHHHhcCCCChhHHHHHH
Q 010446 173 VYIGDL-KFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLE--NYEKSMLVYQRVINVLESRYGKTSILLVTSLL 249 (510)
Q Consensus 173 ~~~g~~-~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 249 (510)
...|.+ ++|+..+.+++.+. |....+++..+.++...| ++++++.++.+++.. +|....+++
T Consensus 43 ~~~~e~s~~aL~~t~~~L~~n-------P~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~--------nPk~y~aW~ 107 (306)
T 3dra_A 43 MKAEEYSERALHITELGINEL-------ASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALD--------NEKNYQIWN 107 (306)
T ss_dssp HHTTCCSHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH--------CTTCCHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHC-------cHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH--------CcccHHHHH
Confidence 344555 68999999999875 666777999999999999 999999999999976 344556777
Q ss_pred HHHHHH----hhc---CCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChH--HHHHHHHHHHHHHHHH
Q 010446 250 GMAKVL----GSI---GRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAV--DAESVFSRILKIYTKV 320 (510)
Q Consensus 250 ~la~~~----~~~---g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~--~A~~~~~~al~~~~~~ 320 (510)
..+.++ ... +++++++.++.++++. +|....++...+.++...|+++ +++.++.++++.
T Consensus 108 ~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~--------~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~---- 175 (306)
T 3dra_A 108 YRQLIIGQIMELNNNDFDPYREFDILEAMLSS--------DPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDT---- 175 (306)
T ss_dssp HHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHhccccCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHh----
Confidence 777777 666 8999999999999987 6777899999999999999999 999999999985
Q ss_pred cCCCChHHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHH-HH
Q 010446 321 YGENDGRVGMAMCSLAHAKCANGN------AEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQE-GR 393 (510)
Q Consensus 321 ~~~~~~~~~~~~~~la~~~~~~g~------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~-A~ 393 (510)
++....++...+.+....|+ ++++++++.+++.. .+++ ..+++.++.++...|+..+ ..
T Consensus 176 ----d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~-------~p~n---~SaW~y~~~ll~~~~~~~~~~~ 241 (306)
T 3dra_A 176 ----DLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVK-------CPQN---PSTWNYLLGIHERFDRSITQLE 241 (306)
T ss_dssp ----CTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHH-------CSSC---HHHHHHHHHHHHHTTCCGGGGH
T ss_pred ----CCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHh-------CCCC---ccHHHHHHHHHHhcCCChHHHH
Confidence 56666889999999999887 99999999999987 3333 4567889999999998655 44
Q ss_pred HHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHH
Q 010446 394 ELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLG 464 (510)
Q Consensus 394 ~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la 464 (510)
.++++++... ...+....++..++.+|.+.|+.++|+++|+.+.+ .-+|.....+...+
T Consensus 242 ~~~~~~~~~~-----~~~~~s~~al~~la~~~~~~~~~~~A~~~~~~l~~-------~~Dpir~~yW~~~~ 300 (306)
T 3dra_A 242 EFSLQFVDLE-----KDQVTSSFALETLAKIYTQQKKYNESRTVYDLLKS-------KYNPIRSNFWDYQI 300 (306)
T ss_dssp HHHHTTEEGG-----GTEESCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-------TTCGGGHHHHHHHH
T ss_pred HHHHHHHhcc-----CCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHh-------ccChHHHHHHHHHH
Confidence 4555554421 11345567889999999999999999999999875 22566555555444
No 121
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.51 E-value=1.7e-13 Score=119.40 Aligned_cols=207 Identities=12% Similarity=-0.018 Sum_probs=163.2
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH-------HHHHhhcCCHHHHHHHHHHHHHHHHHh
Q 010446 206 LLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGM-------AKVLGSIGRAKKAVEIYHRVITILELN 278 (510)
Q Consensus 206 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l-------a~~~~~~g~~~~A~~~~~~al~~~~~~ 278 (510)
++..|..+ ..+++..|...|.+++.+ +|..+.+|.++ +.++...+++.+++..+++++.+....
T Consensus 10 ~~~~~~~~-~~~d~~~A~~~F~~a~~~--------dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~ 80 (282)
T 4f3v_A 10 LFESAVSM-LPMSEARSLDLFTEITNY--------DESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMST 80 (282)
T ss_dssp HHHHHHHH-TTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGG
T ss_pred HHHHHhcc-cCCCHHHHHHHHHHHHHh--------ChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhh
Confidence 45556665 689999999999999987 47778999999 899999999999999999988764333
Q ss_pred cCCCCc-------------chHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCH
Q 010446 279 RGTESA-------------DLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNA 345 (510)
Q Consensus 279 ~~~~~~-------------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 345 (510)
.+.... ........++.++...|++++|.+.|...+. ..|... ..+.+|.++...|++
T Consensus 81 l~a~~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~--------~~p~~~-~~~~~a~l~~~~~r~ 151 (282)
T 4f3v_A 81 LNARIAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPV--------AGSEHL-VAWMKAVVYGAAERW 151 (282)
T ss_dssp GCCEEECCTTTCCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCC--------TTCHHH-HHHHHHHHHHHTTCH
T ss_pred hhhhhccCCcccccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHh--------cCCchH-HHHHHHHHHHHcCCH
Confidence 221111 1134456688999999999999999987764 345555 888999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChh-HHHHHHHHHHH
Q 010446 346 EEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPS-FVTHLLNLAAS 424 (510)
Q Consensus 346 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~ 424 (510)
++|+.+++++... +++.....+++.+|.++...|++++|+.+|++++. ++..|. ...+...+|.+
T Consensus 152 ~dA~~~l~~a~~~--------~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~------g~~~P~~~~da~~~~gla 217 (282)
T 4f3v_A 152 TDVIDQVKSAGKW--------PDKFLAGAAGVAHGVAAANLALFTEAERRLTEAND------SPAGEACARAIAWYLAMA 217 (282)
T ss_dssp HHHHHHHTTGGGC--------SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT------STTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcc--------CCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc------CCCCccccHHHHHHHHHH
Confidence 9999999865432 22222345789999999999999999999999863 232244 66788999999
Q ss_pred HHhccCHHHHHHHHHHHHHH
Q 010446 425 YSRSKNFVEAERLLRICLDI 444 (510)
Q Consensus 425 ~~~~g~~~~A~~~~~~al~~ 444 (510)
+..+|+.++|...|++++..
T Consensus 218 L~~lGr~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 218 RRSQGNESAAVALLEWLQTT 237 (282)
T ss_dssp HHHHTCHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhc
Confidence 99999999999999999985
No 122
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.51 E-value=7.5e-13 Score=115.30 Aligned_cols=211 Identities=14% Similarity=0.007 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH-------HHHHHhhCChHHHHHHHHH
Q 010446 115 ERQLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDII-------ALGYVYIGDLKFVQSLLDM 187 (510)
Q Consensus 115 ~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l-------~~~~~~~g~~~~A~~~~~~ 187 (510)
...+..++..+..+ ..+++..|.+.|.+++++ .|..+++|..+ +.++...+++.+++..+++
T Consensus 4 ~~~~~~~~~~~~~~-~~~d~~~A~~~F~~a~~~----------dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~ 72 (282)
T 4f3v_A 4 TDRLASLFESAVSM-LPMSEARSLDLFTEITNY----------DESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSG 72 (282)
T ss_dssp HHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHH----------CTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHH
T ss_pred hHHHHHHHHHHhcc-cCCCHHHHHHHHHHHHHh----------ChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHH
Confidence 34566677777776 689999999999999999 99999999999 8899999999999888888
Q ss_pred HHHhhhhcCCCc----h----------HHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 010446 188 MSGIVDSLKDDE----P----------LLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAK 253 (510)
Q Consensus 188 ~~~~~~~~~~~~----~----------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 253 (510)
.+.+....-... + ....+...++.++...|+|++|.+.|...+. ..|... ..+.+|.
T Consensus 73 ~l~l~p~~l~a~~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~--------~~p~~~-~~~~~a~ 143 (282)
T 4f3v_A 73 SVQISMSTLNARIAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPV--------AGSEHL-VAWMKAV 143 (282)
T ss_dssp TTTCCGGGGCCEEECCTTTCCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCC--------TTCHHH-HHHHHHH
T ss_pred HhcCChhhhhhhhccCCcccccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHh--------cCCchH-HHHHHHH
Confidence 777432210000 0 1234456788999999999999999987754 235555 8899999
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcc-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChH-HHHH
Q 010446 254 VLGSIGRAKKAVEIYHRVITILELNRGTESAD-LVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGR-VGMA 331 (510)
Q Consensus 254 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~ 331 (510)
++...+++++|+.+++++... .++. ...+++.+|.++..+|++++|+.+|++++. ++..|. ...+
T Consensus 144 l~~~~~r~~dA~~~l~~a~~~-------~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~------g~~~P~~~~da 210 (282)
T 4f3v_A 144 VYGAAERWTDVIDQVKSAGKW-------PDKFLAGAAGVAHGVAAANLALFTEAERRLTEAND------SPAGEACARAI 210 (282)
T ss_dssp HHHHTTCHHHHHHHHTTGGGC-------SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT------STTTTTTHHHH
T ss_pred HHHHcCCHHHHHHHHHHhhcc-------CCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc------CCCCccccHHH
Confidence 999999999999999866432 1222 245889999999999999999999999874 233244 6778
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 332 MCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 332 ~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
..++|.++..+|+.++|...|++++..
T Consensus 211 ~~~~glaL~~lGr~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 211 AWYLAMARRSQGNESAAVALLEWLQTT 237 (282)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 899999999999999999999999987
No 123
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.50 E-value=1.2e-12 Score=101.68 Aligned_cols=108 Identities=11% Similarity=0.103 Sum_probs=96.7
Q ss_pred hhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHc
Q 010446 242 ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVY 321 (510)
Q Consensus 242 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 321 (510)
++.+.++.++|..++..|+|++|+.+|++++++ .|....++.++|.+|..+|++++|+..+++++++....
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~--------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~- 75 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL--------DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET- 75 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc-
Confidence 356778999999999999999999999999998 56678899999999999999999999999999987654
Q ss_pred CCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 322 GENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 322 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
....+..+.++.++|.++...|++++|+++|++++..
T Consensus 76 ~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 76 RADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 2344567789999999999999999999999999986
No 124
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.50 E-value=3.5e-13 Score=134.03 Aligned_cols=153 Identities=11% Similarity=0.022 Sum_probs=120.5
Q ss_pred cCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHH
Q 010446 131 MGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMG 210 (510)
Q Consensus 131 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 210 (510)
.|++++|+..++++++. .|..+.++..+|.++...|++++|+..++++++.. |....++..+|
T Consensus 2 ~g~~~~A~~~~~~al~~----------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-------p~~~~~~~~lg 64 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRH----------RPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALH-------PGHPEAVARLG 64 (568)
T ss_dssp -----------------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTS-------TTCHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHh----------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHH
Confidence 47899999999999887 67778899999999999999999999999998764 34456689999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHH
Q 010446 211 SMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPL 290 (510)
Q Consensus 211 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 290 (510)
.++...|++++|+.+++++++.. |....++.++|.+|...|++++|+.+++++++. .|....++
T Consensus 65 ~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~ 128 (568)
T 2vsy_A 65 RVRWTQQRHAEAAVLLQQASDAA--------PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQL--------LPEEPYIT 128 (568)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHH
Confidence 99999999999999999999862 444678999999999999999999999999987 45567889
Q ss_pred HHHHHHHHHc---CChHHHHHHHHHHHHH
Q 010446 291 FSLGSLFIKE---GKAVDAESVFSRILKI 316 (510)
Q Consensus 291 ~~la~~~~~~---g~~~~A~~~~~~al~~ 316 (510)
.++|.++... |++++|...++++++.
T Consensus 129 ~~l~~~~~~~~~~g~~~~A~~~~~~al~~ 157 (568)
T 2vsy_A 129 AQLLNWRRRLCDWRALDVLSAQVRAAVAQ 157 (568)
T ss_dssp HHHHHHHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccccHHHHHHHHHHHHhc
Confidence 9999999999 9999999999999986
No 125
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.49 E-value=2.1e-13 Score=108.85 Aligned_cols=102 Identities=9% Similarity=0.069 Sum_probs=94.0
Q ss_pred ChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Q 010446 241 SILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKV 320 (510)
Q Consensus 241 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 320 (510)
+|....+++.+|.++...|++++|+.+|++++.+ .|....++.++|.++...|++++|+..|++++.+
T Consensus 32 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~--------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l---- 99 (151)
T 3gyz_A 32 PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY--------DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL---- 99 (151)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh----
Confidence 5778889999999999999999999999999998 5777889999999999999999999999999996
Q ss_pred cCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 321 YGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 321 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
.|....++.++|.+|...|++++|+..|++++++
T Consensus 100 ----~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 100 ----GKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp ----SSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ----CCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 2444568899999999999999999999999998
No 126
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.48 E-value=1.1e-12 Score=130.51 Aligned_cols=153 Identities=12% Similarity=0.093 Sum_probs=118.7
Q ss_pred cCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Q 010446 258 IGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAH 337 (510)
Q Consensus 258 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 337 (510)
.|++++|+..++++++. .|....++..+|.++...|++++|+..++++++. .|....++.++|.
T Consensus 2 ~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~ 65 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRH--------RPQDFVAWLMLADAELGMGDTTAGEMAVQRGLAL--------HPGHPEAVARLGR 65 (568)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT--------STTCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHH
Confidence 47899999999999886 4566789999999999999999999999999984 4555678999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHH
Q 010446 338 AKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTH 417 (510)
Q Consensus 338 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 417 (510)
++...|++++|+.+++++++. .++. ..++.++|.++...|++++|+..++++++. .|....+
T Consensus 66 ~~~~~g~~~~A~~~~~~al~~-------~p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~ 127 (568)
T 2vsy_A 66 VRWTQQRHAEAAVLLQQASDA-------APEH---PGIALWLGHALEDAGQAEAAAAAYTRAHQL--------LPEEPYI 127 (568)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH-------CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHH
T ss_pred HHHHCCCHHHHHHHHHHHHhc-------CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHH
Confidence 999999999999999999987 3333 456789999999999999999999999986 3445678
Q ss_pred HHHHHHHHHhc---cCHHHHHHHHHHHHHH
Q 010446 418 LLNLAASYSRS---KNFVEAERLLRICLDI 444 (510)
Q Consensus 418 ~~~la~~~~~~---g~~~~A~~~~~~al~~ 444 (510)
+..+|.++... |++++|.+.++++++.
T Consensus 128 ~~~l~~~~~~~~~~g~~~~A~~~~~~al~~ 157 (568)
T 2vsy_A 128 TAQLLNWRRRLCDWRALDVLSAQVRAAVAQ 157 (568)
T ss_dssp HHHHHHHHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccccHHHHHHHHHHHHhc
Confidence 89999999999 9999999999999985
No 127
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.47 E-value=2e-12 Score=100.41 Aligned_cols=108 Identities=13% Similarity=0.101 Sum_probs=95.8
Q ss_pred cchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhc
Q 010446 284 ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSN 363 (510)
Q Consensus 284 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 363 (510)
++.+.++.++|..+...|++++|+.+|++++++ +|....++.++|.+|..+|++++|+..+++++++.+..
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~--------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~- 75 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL--------DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET- 75 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc-
Confidence 345778899999999999999999999999986 35556789999999999999999999999999998763
Q ss_pred cCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 364 YMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 402 (510)
Q Consensus 364 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 402 (510)
.......+.++.++|.++...|++++|+++|++++..
T Consensus 76 --~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 76 --RADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp --TCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --chhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4455667789999999999999999999999999875
No 128
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.47 E-value=2.5e-13 Score=125.09 Aligned_cols=162 Identities=10% Similarity=0.083 Sum_probs=135.0
Q ss_pred HcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCC--------CchH
Q 010446 130 MMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKD--------DEPL 201 (510)
Q Consensus 130 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~--------~~~~ 201 (510)
..+++++|+..++++++. .+..+.++..+|.++...|++++|+..|++++.+...... ..+.
T Consensus 125 ~L~~~~~A~~~~~~a~~~----------~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~ 194 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEE----------KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQAL 194 (336)
T ss_dssp EEEEEECCCCGGGCCHHH----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHH
T ss_pred EEeecccccchhcCCHHH----------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHH
Confidence 345677788778777766 7778899999999999999999999999999988633110 0123
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCC
Q 010446 202 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT 281 (510)
Q Consensus 202 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 281 (510)
...++.++|.++...|++++|+.+|++++++ .|....+++++|.+|...|++++|+..|++++++
T Consensus 195 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l------- 259 (336)
T 1p5q_A 195 RLASHLNLAMCHLKLQAFSAAIESCNKALEL--------DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQL------- 259 (336)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-------
Confidence 3577999999999999999999999999987 2455788999999999999999999999999998
Q ss_pred CCcchHHHHHHHHHHHHHcCChHHH-HHHHHHHHHHH
Q 010446 282 ESADLVLPLFSLGSLFIKEGKAVDA-ESVFSRILKIY 317 (510)
Q Consensus 282 ~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~al~~~ 317 (510)
.|....++..++.++...|++++| ...|++++...
T Consensus 260 -~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~ 295 (336)
T 1p5q_A 260 -YPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERL 295 (336)
T ss_dssp -CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 556678999999999999999999 45677776544
No 129
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.46 E-value=3.4e-12 Score=101.83 Aligned_cols=104 Identities=11% Similarity=0.182 Sum_probs=95.2
Q ss_pred CCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 010446 197 DDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILE 276 (510)
Q Consensus 197 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 276 (510)
.-.|....+++.+|..+...|++++|+..|++++.+ +|....++.++|.++...|++++|+..|++++++
T Consensus 30 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~--------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l-- 99 (151)
T 3gyz_A 30 AIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY--------DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL-- 99 (151)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh--
Confidence 445888888999999999999999999999999986 3556778999999999999999999999999998
Q ss_pred HhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 277 LNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKI 316 (510)
Q Consensus 277 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 316 (510)
.|....+++++|.+|..+|++++|+..|++++++
T Consensus 100 ------~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 100 ------GKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp ------SSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ------CCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 5667789999999999999999999999999997
No 130
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.45 E-value=4.5e-13 Score=123.32 Aligned_cols=164 Identities=16% Similarity=0.171 Sum_probs=133.0
Q ss_pred hhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCC-------CChhHHH
Q 010446 174 YIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGK-------TSILLVT 246 (510)
Q Consensus 174 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~-------~~~~~~~ 246 (510)
..+++++|+..++++.... |..+.++..+|.++...|++++|+..|++++.+....... ..+....
T Consensus 125 ~L~~~~~A~~~~~~a~~~~-------p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~ 197 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEEK-------LEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLA 197 (336)
T ss_dssp EEEEEECCCCGGGCCHHHH-------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHH
T ss_pred EEeecccccchhcCCHHHH-------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHH
Confidence 4566777777776655443 6777889999999999999999999999999875321000 0122368
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCCh
Q 010446 247 SLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDG 326 (510)
Q Consensus 247 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 326 (510)
++.++|.+|...|++++|+.++++++++ .|....+++++|.+|..+|++++|+..|++++++ .|
T Consensus 198 ~~~nla~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l--------~P 261 (336)
T 1p5q_A 198 SHLNLAMCHLKLQAFSAAIESCNKALEL--------DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQL--------YP 261 (336)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--------CC
Confidence 8999999999999999999999999998 4667889999999999999999999999999986 34
Q ss_pred HHHHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHH
Q 010446 327 RVGMAMCSLAHAKCANGNAEEA-VELYKKALRVIK 360 (510)
Q Consensus 327 ~~~~~~~~la~~~~~~g~~~~A-~~~~~~al~~~~ 360 (510)
....++.+++.++...|++++| ...|++++....
T Consensus 262 ~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~ 296 (336)
T 1p5q_A 262 NNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLA 296 (336)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4456889999999999999999 557777766544
No 131
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.41 E-value=2e-11 Score=95.78 Aligned_cols=130 Identities=21% Similarity=0.394 Sum_probs=112.2
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCc
Q 010446 205 ILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESA 284 (510)
Q Consensus 205 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 284 (510)
+++.+|.++...|++++|+.+++++++.. +....++..+|.++...|++++|+.++++++.. .|
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~ 66 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELD--------PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DP 66 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CT
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcC--------CcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHH--------CC
Confidence 47889999999999999999999998752 333567889999999999999999999999876 34
Q ss_pred chHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 285 DLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 285 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
.....+..+|.++...|++++|+.++++++... |....++..+|.++...|++++|..++++++..
T Consensus 67 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 67 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD--------PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------CCChHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 456788899999999999999999999998752 333467788999999999999999999999876
No 132
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.41 E-value=3e-10 Score=101.99 Aligned_cols=235 Identities=9% Similarity=-0.006 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHHHcCChh-HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCC----------hHHHHHHH
Q 010446 117 QLLELFNEVKSMIMMGNKN-DAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGD----------LKFVQSLL 185 (510)
Q Consensus 117 ~~~~l~~~~~~~~~~g~~~-~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~----------~~~A~~~~ 185 (510)
.+..+..........|+++ +|+.++.+++.+ .|....+++..+.+....|. +++++.++
T Consensus 28 ~y~~~~~~~~~~~~~~e~s~eaL~~t~~~L~~----------nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~ 97 (331)
T 3dss_A 28 LYQSATQAVFQKRQAGELDESVLELTSQILGA----------NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFL 97 (331)
T ss_dssp HHHHHHHHHHHHHHTTCCSHHHHHHHHHHHTT----------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH----------CchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHH
Confidence 3444555666667888887 789999999988 88888999999998887765 56777777
Q ss_pred HHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhc--HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCC-HH
Q 010446 186 DMMSGIVDSLKDDEPLLDAILLHMGSMYSTLEN--YEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGR-AK 262 (510)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-~~ 262 (510)
+.++... |....+++..+.++...|+ +++++.++.++++. +|....++...+.+....|. ++
T Consensus 98 ~~~L~~~-------PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~--------dprNy~AW~~R~~vl~~l~~~~~ 162 (331)
T 3dss_A 98 ESCLRVN-------PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEA--------DERNFHCWDYRRFVAAQAAVAPA 162 (331)
T ss_dssp HHHHHHC-------TTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHhC-------CCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhCcCHH
Confidence 7776653 5556678999999998884 89999999999986 35667889999999999998 69
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHc--------------CChHHHHHHHHHHHHHHHHHcCCCChHH
Q 010446 263 KAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKE--------------GKAVDAESVFSRILKIYTKVYGENDGRV 328 (510)
Q Consensus 263 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~--------------g~~~~A~~~~~~al~~~~~~~~~~~~~~ 328 (510)
++++++.++++. +|....+++..+.++... +.++++++++.+++.+ +|..
T Consensus 163 eel~~~~~~I~~--------~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~--------~P~d 226 (331)
T 3dss_A 163 EELAFTDSLITR--------NFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFT--------DPND 226 (331)
T ss_dssp HHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHH--------STTC
T ss_pred HHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHh--------CCCC
Confidence 999999999987 677788999999888877 4578899999999885 3555
Q ss_pred HHHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHH---HcCChHHHHH
Q 010446 329 GMAMCSLAHAKCAN-----------GNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLH---IVGRGQEGRE 394 (510)
Q Consensus 329 ~~~~~~la~~~~~~-----------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~---~~g~~~~A~~ 394 (510)
..+++.+..++... +.++++++.+++++++ .|+... ++..++.+.. ..|..++...
T Consensus 227 ~SaW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~-------~pd~~w---~l~~~~~~~~~~~~~~~~~~~~~ 296 (331)
T 3dss_A 227 QSAWFYHRWLLGAGSGRCELSVEKSTVLQSELESCKELQEL-------EPENKW---CLLTIILLMRALDPLLYEKETLQ 296 (331)
T ss_dssp HHHHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHH-------CTTCHH---HHHHHHHHHHHHCTTTTHHHHHH
T ss_pred HHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHhh-------Ccccch---HHHHHHHHHHhhcccccHHHHHH
Confidence 56666555555544 3467888888888877 455533 2333333222 3567778888
Q ss_pred HHHHHHHH
Q 010446 395 LLEECLLI 402 (510)
Q Consensus 395 ~~~~al~~ 402 (510)
++.+.+++
T Consensus 297 ~l~~l~~~ 304 (331)
T 3dss_A 297 YFSTLKAV 304 (331)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88887765
No 133
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.40 E-value=2.2e-11 Score=95.55 Aligned_cols=131 Identities=15% Similarity=0.272 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCCh
Q 010446 163 AILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSI 242 (510)
Q Consensus 163 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 242 (510)
.++..+|.++...|++++|+..+++++... |....++..+|.++...|++++|..++++++... |
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--------~ 66 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELD-------PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD--------P 66 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--------T
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcC-------CcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHC--------C
Confidence 367889999999999999999999988763 2224457889999999999999999999998752 3
Q ss_pred hHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 243 LLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKI 316 (510)
Q Consensus 243 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 316 (510)
....++..+|.++...|++++|+.++++++.. .|....++..+|.++...|++++|..++++++..
T Consensus 67 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 67 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 33567889999999999999999999999986 3444678889999999999999999999999875
No 134
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.39 E-value=3.4e-12 Score=102.02 Aligned_cols=103 Identities=12% Similarity=0.097 Sum_probs=91.9
Q ss_pred ChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhc
Q 010446 158 GIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRY 237 (510)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 237 (510)
.|.....++.+|.++...|++++|+..|++++... |....+++.+|.++...|++++|+..|++++.+.
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~---- 85 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLD-------HYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD---- 85 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS----
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcC-------cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC----
Confidence 78899999999999999999999999999998764 3345568999999999999999999999999872
Q ss_pred CCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 010446 238 GKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITIL 275 (510)
Q Consensus 238 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 275 (510)
|....+++++|.+|...|++++|+..|++++++.
T Consensus 86 ----p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 119 (148)
T 2vgx_A 86 ----IXEPRFPFHAAECLLQXGELAEAESGLFLAQELI 119 (148)
T ss_dssp ----TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ----CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 3445678999999999999999999999999884
No 135
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.39 E-value=9.3e-12 Score=99.48 Aligned_cols=103 Identities=15% Similarity=0.121 Sum_probs=92.8
Q ss_pred chHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHh
Q 010446 199 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELN 278 (510)
Q Consensus 199 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 278 (510)
.|.....++.+|..+...|++++|+..|++++.. .|....++.++|.++...|++++|+..|++++.+
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l---- 84 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVL--------DHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM---- 84 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHc--------CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc----
Confidence 3777778999999999999999999999999986 2455678899999999999999999999999998
Q ss_pred cCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q 010446 279 RGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIY 317 (510)
Q Consensus 279 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 317 (510)
.|....++.++|.+|...|++++|+..|++++++.
T Consensus 85 ----~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 119 (148)
T 2vgx_A 85 ----DIXEPRFPFHAAECLLQXGELAEAESGLFLAQELI 119 (148)
T ss_dssp ----STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ----CCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 45667889999999999999999999999999875
No 136
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.39 E-value=3.9e-11 Score=98.08 Aligned_cols=140 Identities=12% Similarity=0.042 Sum_probs=117.6
Q ss_pred hHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcC
Q 010446 243 LLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYG 322 (510)
Q Consensus 243 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 322 (510)
..+..+..+|.++...|++++|+.+++++++. .|....++..+|.++...|++++|+.++++++..
T Consensus 11 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~------ 76 (166)
T 1a17_A 11 KRAEELKTQANDYFKAKDYENAIKFYSQAIEL--------NPSNAIYYGNRSLAYLRTECYGYALGDATRAIEL------ 76 (166)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------
Confidence 45677899999999999999999999999987 4556788999999999999999999999999986
Q ss_pred CCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 323 ENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 402 (510)
Q Consensus 323 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 402 (510)
.|....++..+|.++...|++++|+.++++++.. .+..... .....++..+...|++++|+..+.++..+
T Consensus 77 --~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-------~p~~~~~-~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 77 --DKKYIKGYYRRAASNMALGKFRAALRDYETVVKV-------KPHDKDA-KMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp --CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------STTCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHh-------CCCCHHH-HHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 2444578899999999999999999999999987 3334332 23355666688899999999999998887
Q ss_pred HHHh
Q 010446 403 TEKY 406 (510)
Q Consensus 403 ~~~~ 406 (510)
....
T Consensus 147 ~~~~ 150 (166)
T 1a17_A 147 VDSL 150 (166)
T ss_dssp HHHC
T ss_pred hccc
Confidence 7553
No 137
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.37 E-value=3.4e-11 Score=98.45 Aligned_cols=139 Identities=12% Similarity=0.053 Sum_probs=115.4
Q ss_pred hhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcC
Q 010446 159 IEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYG 238 (510)
Q Consensus 159 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 238 (510)
...+..+..+|.++...|++++|+..+++++... |....++..+|.++...|++++|+.++++++...
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~----- 77 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELN-------PSNAIYYGNRSLAYLRTECYGYALGDATRAIELD----- 77 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-------CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----
Confidence 3457788999999999999999999999998864 3335568999999999999999999999999862
Q ss_pred CCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHH--HHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 239 KTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPL--FSLGSLFIKEGKAVDAESVFSRILKI 316 (510)
Q Consensus 239 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~--~~la~~~~~~g~~~~A~~~~~~al~~ 316 (510)
|....++..+|.++...|++++|+.++++++++ .|....++ ..++..+...|++++|+..+.++..+
T Consensus 78 ---~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~--------~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 78 ---KKYIKGYYRRAASNMALGKFRAALRDYETVVKV--------KPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp ---TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 344678999999999999999999999999987 23333444 45555688899999999999998887
Q ss_pred HHHH
Q 010446 317 YTKV 320 (510)
Q Consensus 317 ~~~~ 320 (510)
....
T Consensus 147 ~~~~ 150 (166)
T 1a17_A 147 VDSL 150 (166)
T ss_dssp HHHC
T ss_pred hccc
Confidence 7553
No 138
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.37 E-value=5.8e-11 Score=92.09 Aligned_cols=122 Identities=12% Similarity=0.032 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcC
Q 010446 201 LLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRG 280 (510)
Q Consensus 201 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 280 (510)
..+..+..+|..+...|++++|+..|+++++.. |....++.++|.++...|++++|+..+++++++
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------ 67 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRA--------PEDARGYSNRAAALAKLMSFPEAIADCNKAIEK------ 67 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------CCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------
Confidence 345668999999999999999999999999862 445688999999999999999999999999997
Q ss_pred CCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH
Q 010446 281 TESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKC 340 (510)
Q Consensus 281 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 340 (510)
.|....++..+|.++...|++++|+..+++++++..... ..|....+...++.+..
T Consensus 68 --~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~--~~p~~~~~~~~l~~~~~ 123 (126)
T 3upv_A 68 --DPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYKASQ 123 (126)
T ss_dssp --CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHHHHH
T ss_pred --CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccC--CchhHHHHHHHHHHHHH
Confidence 466688999999999999999999999999999864432 23444555555555543
No 139
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.36 E-value=3.7e-11 Score=93.25 Aligned_cols=103 Identities=15% Similarity=-0.010 Sum_probs=92.5
Q ss_pred hHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcC
Q 010446 243 LLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYG 322 (510)
Q Consensus 243 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 322 (510)
..+..+..+|..+...|++++|+..|++++++ .|....++.++|.++...|++++|+..+++++++
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------ 67 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKR--------APEDARGYSNRAAALAKLMSFPEAIADCNKAIEK------ 67 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------
Confidence 34677889999999999999999999999997 4566789999999999999999999999999986
Q ss_pred CCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 010446 323 ENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKD 361 (510)
Q Consensus 323 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 361 (510)
+|....++.++|.++...|++++|+..+++++++...
T Consensus 68 --~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 104 (126)
T 3upv_A 68 --DPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAE 104 (126)
T ss_dssp --CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred --CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcc
Confidence 3455678999999999999999999999999998644
No 140
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.35 E-value=4.1e-11 Score=94.20 Aligned_cols=118 Identities=19% Similarity=0.093 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCC----CcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 010446 244 LVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTE----SADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTK 319 (510)
Q Consensus 244 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~----~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 319 (510)
.+..+.+.|..+...|+|++|+..|++++++........ .|....+|.++|.++..+|++++|+..++++++++.+
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 356788999999999999999999999999964411100 1123459999999999999999999999999998666
Q ss_pred HcCCCChHHHHHH----HHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Q 010446 320 VYGENDGRVGMAM----CSLAHAKCANGNAEEAVELYKKALRVIKDS 362 (510)
Q Consensus 320 ~~~~~~~~~~~~~----~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 362 (510)
. ++-+|....+| +++|.++..+|++++|+..|++++++..+.
T Consensus 90 ~-~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d 135 (159)
T 2hr2_A 90 R-GELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 135 (159)
T ss_dssp H-CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred c-ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 5 34567788888 999999999999999999999999997763
No 141
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.35 E-value=3e-11 Score=94.93 Aligned_cols=119 Identities=16% Similarity=0.075 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhC----CCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Q 010446 373 ENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKG----KEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKT 448 (510)
Q Consensus 373 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~----~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 448 (510)
+..+.+.|..+...|++++|+..|++++++...... ...|....+|.++|.++..+|++++|+..++++++++.+.
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 456688999999999999999999999998744110 0112245599999999999999999999999999986665
Q ss_pred hCCCChhhHHHH----HHHHHHHHhcCChHHHHHHHHHHHHHHHHhcC
Q 010446 449 VGPDDQSISFPM----LHLGITLYHLNRDKEAEKLVLEALYIREIAFG 492 (510)
Q Consensus 449 ~~~~~~~~~~~~----~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 492 (510)
++-+|+...+| +++|.++..+|++++|+..|++++++...--|
T Consensus 91 -~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~ 137 (159)
T 2hr2_A 91 -GELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKG 137 (159)
T ss_dssp -CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCS
T ss_pred -ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHH
Confidence 34567888888 99999999999999999999999999877444
No 142
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.35 E-value=2.9e-12 Score=108.46 Aligned_cols=167 Identities=11% Similarity=-0.014 Sum_probs=116.4
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCCh
Q 010446 291 FSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDS 370 (510)
Q Consensus 291 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 370 (510)
...+......|++++|.+.+...... .+..+..+..+|..+...|++++|+.+|++++...... ++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~----~~~~ 75 (198)
T 2fbn_A 8 HHHSSGRENLYFQGAKKSIYDYTDEE--------KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHT----EEWD 75 (198)
T ss_dssp --------------CCCSGGGCCHHH--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTC----TTCC
T ss_pred cchhhhhhhhhhccccCchhhCCHHH--------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc----cccc
Confidence 34556667778888888777755442 24466788999999999999999999999999874321 1111
Q ss_pred H----------HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHH
Q 010446 371 I----------MENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRI 440 (510)
Q Consensus 371 ~----------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 440 (510)
. ...++.++|.++...|++++|+.++++++.+ .|....++..+|.+|...|++++|+.+|++
T Consensus 76 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~ 147 (198)
T 2fbn_A 76 DQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI--------DKNNVKALYKLGVANMYFGFLEEAKENLYK 147 (198)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 1 1367899999999999999999999999986 345567899999999999999999999999
Q ss_pred HHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHH-HHHHHHHH
Q 010446 441 CLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAE-KLVLEALY 485 (510)
Q Consensus 441 al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~al~ 485 (510)
++.+ .|....++..++.++...|+..++. ..+.+.+.
T Consensus 148 al~~--------~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 148 AASL--------NPNNLDIRNSYELCVNKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHH--------STTCHHHHHHHHHHHHHHHHHHC-----------
T ss_pred HHHH--------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9985 3555677889999999999888877 44444433
No 143
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.35 E-value=2.2e-11 Score=104.32 Aligned_cols=139 Identities=14% Similarity=0.115 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCC
Q 010446 245 VTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEN 324 (510)
Q Consensus 245 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 324 (510)
...++.+|..+...|++++|+..+++++. + ...++.++|.++...|++++|+.++++++.+
T Consensus 6 ~~~~~~~g~~~~~~~~~~~A~~~~~~a~~----------~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-------- 66 (213)
T 1hh8_A 6 AISLWNEGVLAADKKDWKGALDAFSAVQD----------P-HSRICFNIGCMYTILKNMTEAEKAFTRSINR-------- 66 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTSSS----------C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHcC----------C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------
Confidence 45678899999999999999999998841 1 3578999999999999999999999999986
Q ss_pred ChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc------CCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 010446 325 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNY------MSLDDSIMENMRIDLAELLHIVGRGQEGRELLEE 398 (510)
Q Consensus 325 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~------~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 398 (510)
.|....++.++|.++...|++++|+..++++++....... .....+....++.++|.++...|++++|+..+++
T Consensus 67 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 146 (213)
T 1hh8_A 67 DKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLAL 146 (213)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 2445678999999999999999999999999987432100 0002334567889999999999999999999999
Q ss_pred HHHH
Q 010446 399 CLLI 402 (510)
Q Consensus 399 al~~ 402 (510)
++.+
T Consensus 147 al~~ 150 (213)
T 1hh8_A 147 ATSM 150 (213)
T ss_dssp HHTT
T ss_pred HHHc
Confidence 9875
No 144
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.34 E-value=2.4e-12 Score=115.35 Aligned_cols=194 Identities=12% Similarity=0.011 Sum_probs=136.1
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCC
Q 010446 245 VTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEN 324 (510)
Q Consensus 245 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 324 (510)
+..+..+|..+...|++++|+.+|++++.. .|....++.++|.+|...|++++|+..+++++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~-------- 67 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKMQQPEQALADCRRALEL-------- 67 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------
Confidence 567889999999999999999999999997 5666889999999999999999999999999874
Q ss_pred ChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 010446 325 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITE 404 (510)
Q Consensus 325 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 404 (510)
+|....++.++|.++...|++++|+..|++++++.... ......... ..+ .. .++..+... .
T Consensus 68 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~---~~~~~~~~~--~~~--~~------~~~~~~~~~-----~ 129 (281)
T 2c2l_A 68 DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ---RLNFGDDIP--SAL--RI------AKKKRWNSI-----E 129 (281)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT---TCCCCSHHH--HHH--HH------HHHHHHHHH-----H
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc---hhhHHHHHH--HHH--HH------HHHHHHHHH-----H
Confidence 45566889999999999999999999999999987652 111111111 111 11 111111111 1
Q ss_pred HhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhc-CChHHHHHHHHHH
Q 010446 405 KYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHL-NRDKEAEKLVLEA 483 (510)
Q Consensus 405 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~-g~~~~A~~~~~~a 483 (510)
....+..+. +...++.++ .|++++|++.++++++. .|........++.++... +.+++|...|.++
T Consensus 130 ~~~~~~~~~---i~~~l~~l~--~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~~~~~~~a~~~f~~a 196 (281)
T 2c2l_A 130 ERRIHQESE---LHSYLTRLI--AAERERELEECQRNHEG--------HEDDGHIRAQQACIEAKHDKYMADMDELFSQV 196 (281)
T ss_dssp HTCCCCCCH---HHHHHHHHH--HHHHHHHHTTTSGGGTT--------TSCHHHHTHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhhhHH---HHHHHHHHH--HHHHHHHHHHHHhhhcc--------ccchhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 111122333 333445543 68999999999988873 334344455666666555 6678888888877
Q ss_pred HH
Q 010446 484 LY 485 (510)
Q Consensus 484 l~ 485 (510)
.+
T Consensus 197 ~~ 198 (281)
T 2c2l_A 197 DE 198 (281)
T ss_dssp SC
T ss_pred hc
Confidence 55
No 145
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.34 E-value=1.3e-11 Score=105.66 Aligned_cols=136 Identities=13% Similarity=0.086 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCC
Q 010446 204 AILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTES 283 (510)
Q Consensus 204 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 283 (510)
..++.+|..+...|++++|+..|++++. + ...++.++|.+|...|++++|+.++++++++ .
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~-------~----~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~ 67 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAVQD-------P----HSRICFNIGCMYTILKNMTEAEKAFTRSINR--------D 67 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSSS-------C----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHcC-------C----ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------C
Confidence 3478899999999999999999998841 1 2568999999999999999999999999987 4
Q ss_pred cchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHc--------CCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q 010446 284 ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVY--------GENDGRVGMAMCSLAHAKCANGNAEEAVELYKKA 355 (510)
Q Consensus 284 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 355 (510)
|....++.++|.++...|++++|+..++++++...... ....+....++.++|.++...|++++|...++++
T Consensus 68 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 147 (213)
T 1hh8_A 68 KHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALA 147 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 55678999999999999999999999999998632110 0022456688999999999999999999999999
Q ss_pred HHH
Q 010446 356 LRV 358 (510)
Q Consensus 356 l~~ 358 (510)
+.+
T Consensus 148 l~~ 150 (213)
T 1hh8_A 148 TSM 150 (213)
T ss_dssp HTT
T ss_pred HHc
Confidence 887
No 146
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.33 E-value=3e-12 Score=108.36 Aligned_cols=159 Identities=12% Similarity=0.058 Sum_probs=113.6
Q ss_pred HHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCCh---
Q 010446 166 DIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSI--- 242 (510)
Q Consensus 166 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~--- 242 (510)
...+......|+++++...++..... .+..+..+..+|..+...|++++|+..|++++.+.... ++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~ 78 (198)
T 2fbn_A 8 HHHSSGRENLYFQGAKKSIYDYTDEE-------KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHT--EEWDDQI 78 (198)
T ss_dssp --------------CCCSGGGCCHHH-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTC--TTCCCHH
T ss_pred cchhhhhhhhhhccccCchhhCCHHH-------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc--cccchhh
Confidence 34455666778888887777543322 14556678899999999999999999999999864221 0000
Q ss_pred -------hHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 010446 243 -------LLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILK 315 (510)
Q Consensus 243 -------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 315 (510)
....++.++|.++...|++++|+.++++++++ .|....++..+|.+|...|++++|+..|++++.
T Consensus 79 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 150 (198)
T 2fbn_A 79 LLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI--------DKNNVKALYKLGVANMYFGFLEEAKENLYKAAS 150 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 12478999999999999999999999999987 456678999999999999999999999999998
Q ss_pred HHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHH
Q 010446 316 IYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAV 349 (510)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 349 (510)
+ .|....++..++.++...++..++.
T Consensus 151 ~--------~p~~~~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 151 L--------NPNNLDIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp H--------STTCHHHHHHHHHHHHHHHHHHC--
T ss_pred H--------CCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 6 2444567788888888887777766
No 147
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.32 E-value=6.3e-11 Score=92.71 Aligned_cols=125 Identities=9% Similarity=0.085 Sum_probs=107.1
Q ss_pred CCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHH
Q 010446 155 GNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLE 234 (510)
Q Consensus 155 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 234 (510)
....+.....+..+|.++...|++++|+..+++++... |....++..+|.++...|++++|+.+++++++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-------~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~- 80 (133)
T 2lni_A 9 SHMNPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRN-------PKDAKLYSNRAACYTKLLEFQLALKDCEECIQLE- 80 (133)
T ss_dssp CCSSSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTC-------TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC-
T ss_pred CCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-------CCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-
Confidence 34567888999999999999999999999999998764 3335568999999999999999999999999862
Q ss_pred HhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCC
Q 010446 235 SRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGK 302 (510)
Q Consensus 235 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 302 (510)
|....++..+|.++...|++++|+.+++++++. .|....++..++.++...|+
T Consensus 81 -------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 81 -------PTFIKGYTRKAAALEAMKDYTKAMDVYQKALDL--------DSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp -------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CGGGTHHHHHHHHHHHHHTC
T ss_pred -------CCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHh--------CCCchHHHHHHHHHHHHhcC
Confidence 344678899999999999999999999999987 45567788899999887764
No 148
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.29 E-value=5.6e-12 Score=121.18 Aligned_cols=154 Identities=12% Similarity=0.104 Sum_probs=125.8
Q ss_pred HcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCC--------CchH
Q 010446 130 MMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKD--------DEPL 201 (510)
Q Consensus 130 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~--------~~~~ 201 (510)
..+++++|+..++.+++. .+..+..+..+|..++..|+|++|+..|++++.+...... ..+.
T Consensus 246 ~l~~~~~A~~~~~~~~~~----------~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~ 315 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKE----------KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESF 315 (457)
T ss_dssp EEEEEECCCCGGGSCHHH----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHH
T ss_pred hhhhcccCcchhhcCHHH----------HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHH
Confidence 345667788777777766 6778889999999999999999999999999988633110 0123
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCC
Q 010446 202 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT 281 (510)
Q Consensus 202 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 281 (510)
...+++++|.+|..+|++++|+.+|++++++. |....+++++|.+|..+|++++|+..|++++++
T Consensus 316 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~--------p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l------- 380 (457)
T 1kt0_A 316 LLAAFLNLAMCYLKLREYTKAVECCDKALGLD--------SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV------- 380 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-------
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--------CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-------
Confidence 46778999999999999999999999999872 445788999999999999999999999999987
Q ss_pred CCcchHHHHHHHHHHHHHcCChHHHHHH
Q 010446 282 ESADLVLPLFSLGSLFIKEGKAVDAESV 309 (510)
Q Consensus 282 ~~~~~~~~~~~la~~~~~~g~~~~A~~~ 309 (510)
.|....++..++.++...+++++|...
T Consensus 381 -~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 381 -NPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp -C----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455678899999999999999887753
No 149
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.28 E-value=8.1e-11 Score=92.10 Aligned_cols=124 Identities=14% Similarity=0.096 Sum_probs=105.3
Q ss_pred CCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 010446 197 DDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILE 276 (510)
Q Consensus 197 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 276 (510)
...+.....++.+|..+...|++++|+..++++++. .|....++..+|.++...|++++|+.+++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~-- 79 (133)
T 2lni_A 10 HMNPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKR--------NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQL-- 79 (133)
T ss_dssp CSSSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHH--
T ss_pred CcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHh--
Confidence 344566777999999999999999999999999874 2444678999999999999999999999999987
Q ss_pred HhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCC
Q 010446 277 LNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGN 344 (510)
Q Consensus 277 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 344 (510)
.|....++..+|.++...|++++|+.++++++.. .|....++..++.++...|+
T Consensus 80 ------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 80 ------EPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDL--------DSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp ------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CGGGTHHHHHHHHHHHHHTC
T ss_pred ------CCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHh--------CCCchHHHHHHHHHHHHhcC
Confidence 4556788999999999999999999999999986 34445677888888877664
No 150
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.28 E-value=1.1e-10 Score=90.82 Aligned_cols=123 Identities=16% Similarity=0.139 Sum_probs=106.2
Q ss_pred ChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhc
Q 010446 158 GIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRY 237 (510)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 237 (510)
.+..+..+..+|..+...|++++|+..+++++... |....++..+|.++...|++++|+.++++++...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~---- 76 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELN-------PANAVYFCNRAAAYSKLGNYAGAVQDCERAICID---- 76 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcC-------CCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcC----
Confidence 56778899999999999999999999999998764 2234568899999999999999999999999862
Q ss_pred CCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCCh
Q 010446 238 GKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKA 303 (510)
Q Consensus 238 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 303 (510)
|....++..+|.++...|++++|+.+++++++. .|....++..+|.++...|++
T Consensus 77 ----~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 77 ----PAYSKAYGRMGLALSSLNKHVEAVAYYKKALEL--------DPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp ----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHHTTC
T ss_pred ----ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc--------CccchHHHHHHHHHHHHHhcC
Confidence 334678899999999999999999999999987 345567888999999988876
No 151
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.27 E-value=1.8e-10 Score=89.67 Aligned_cols=123 Identities=20% Similarity=0.167 Sum_probs=105.2
Q ss_pred ChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Q 010446 241 SILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKV 320 (510)
Q Consensus 241 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 320 (510)
.+.....+..+|..+...|++++|+.++++++.. .|....++..+|.++...|++++|+.++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~---- 75 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL--------NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICI---- 75 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhc----
Confidence 4566788999999999999999999999999987 3445788999999999999999999999999985
Q ss_pred cCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCCh
Q 010446 321 YGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRG 389 (510)
Q Consensus 321 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 389 (510)
.|....++..+|.++...|++++|..++++++.. .++. ..++..++.++...|++
T Consensus 76 ----~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-------~p~~---~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 76 ----DPAYSKAYGRMGLALSSLNKHVEAVAYYKKALEL-------DPDN---ETYKSNLKIAELKLREA 130 (131)
T ss_dssp ----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------STTC---HHHHHHHHHHHHHHTTC
T ss_pred ----CccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc-------Cccc---hHHHHHHHHHHHHHhcC
Confidence 2334568899999999999999999999999987 2333 34568899999988876
No 152
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.27 E-value=2.4e-11 Score=96.46 Aligned_cols=104 Identities=13% Similarity=0.078 Sum_probs=91.9
Q ss_pred ChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhc
Q 010446 158 GIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRY 237 (510)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 237 (510)
.|.....++.+|..+...|++++|+..|++++... |....++..+|.++...|++++|+..|++++.+.
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~---- 82 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLD-------HYDARYFLGLGACRQSLGLYEQALQSYSYGALMD---- 82 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhC-------CccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC----
Confidence 78889999999999999999999999999998764 3345568999999999999999999999999872
Q ss_pred CCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 010446 238 GKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILE 276 (510)
Q Consensus 238 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 276 (510)
|....++.++|.++...|++++|+..+++++++..
T Consensus 83 ----p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 83 ----INEPRFPFHAAECHLQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp ----TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ----CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 34456788999999999999999999999999853
No 153
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.27 E-value=1.3e-11 Score=118.68 Aligned_cols=160 Identities=16% Similarity=0.239 Sum_probs=125.3
Q ss_pred hhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCC-------CChhHHH
Q 010446 174 YIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGK-------TSILLVT 246 (510)
Q Consensus 174 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~-------~~~~~~~ 246 (510)
..+++++|+..++.+.... |..+..+..+|..++..|++++|+..|++++++....... ..+....
T Consensus 246 ~l~~~~~A~~~~~~~~~~~-------~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~ 318 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKEK-------LEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLA 318 (457)
T ss_dssp EEEEEECCCCGGGSCHHHH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHH
T ss_pred hhhhcccCcchhhcCHHHH-------HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHH
Confidence 3456667776665554433 6777889999999999999999999999999975321000 0123368
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCCh
Q 010446 247 SLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDG 326 (510)
Q Consensus 247 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 326 (510)
++.++|.+|..+|++++|+.++++++++ .|....+++++|.+|..+|++++|+..|++++++ .|
T Consensus 319 ~~~nla~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l--------~P 382 (457)
T 1kt0_A 319 AFLNLAMCYLKLREYTKAVECCDKALGL--------DSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV--------NP 382 (457)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------C-
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CC
Confidence 8999999999999999999999999998 4667889999999999999999999999999985 45
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHH-HHHHH
Q 010446 327 RVGMAMCSLAHAKCANGNAEEAVEL-YKKAL 356 (510)
Q Consensus 327 ~~~~~~~~la~~~~~~g~~~~A~~~-~~~al 356 (510)
....++..++.++...|++++|... +.+++
T Consensus 383 ~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f 413 (457)
T 1kt0_A 383 QNKAARLQISMCQKKAKEHNERDRRIYANMF 413 (457)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6667889999999999999887753 44443
No 154
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.27 E-value=6.5e-11 Score=98.02 Aligned_cols=122 Identities=11% Similarity=0.119 Sum_probs=102.7
Q ss_pred HHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHH
Q 010446 128 MIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILL 207 (510)
Q Consensus 128 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (510)
+...|++++|+..+++++.. .|..+.++..+|.++...|++++|+..+++++.+. |....++.
T Consensus 20 ~~~~~~~~~A~~~~~~al~~----------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~ 82 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRA----------NPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLR-------GENAELYA 82 (177)
T ss_dssp CC-----CCCCHHHHHHHHH----------CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-------CSCHHHHH
T ss_pred hhhccCHHHHHHHHHHHHHh----------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-------CCCHHHHH
Confidence 45678999999999999987 77778899999999999999999999999999876 22244588
Q ss_pred HHHHH-HHhhhcH--HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Q 010446 208 HMGSM-YSTLENY--EKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITI 274 (510)
Q Consensus 208 ~l~~~-~~~~g~~--~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 274 (510)
.+|.+ +...|++ ++|+.+++++++.. |....++..+|.++...|++++|+.+++++++.
T Consensus 83 ~la~~l~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 83 ALATVLYYQASQHMTAQTRAMIDKALALD--------SNEITALMLLASDAFMQANYAQAIELWQKVMDL 144 (177)
T ss_dssp HHHHHHHHHTTTCCCHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHhC--------CCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Confidence 99999 8899999 99999999999862 444678899999999999999999999999986
No 155
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.26 E-value=1.4e-11 Score=110.29 Aligned_cols=194 Identities=12% Similarity=0.041 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCC
Q 010446 203 DAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTE 282 (510)
Q Consensus 203 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 282 (510)
+..+..+|..+...|++++|+..|++++.. .|....++.++|.+|...|++++|+..+++++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~-------- 67 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKMQQPEQALADCRRALEL-------- 67 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------
Confidence 345789999999999999999999999986 2445678999999999999999999999999876
Q ss_pred CcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Q 010446 283 SADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDS 362 (510)
Q Consensus 283 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 362 (510)
.|....+++.+|.+|...|++++|+..|++++++.......-.. ....... ..++..+... ...
T Consensus 68 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~-~~~~~~~----------~~~~~~~~~~----~~~- 131 (281)
T 2c2l_A 68 DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGD-DIPSALR----------IAKKKRWNSI----EER- 131 (281)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCS-HHHHHHH----------HHHHHHHHHH----HHT-
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHH-HHHHHHH----------HHHHHHHHHH----HHH-
Confidence 56678899999999999999999999999999986543111111 1111111 1111111111 111
Q ss_pred ccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhc-cCHHHHHHHHHHH
Q 010446 363 NYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRS-KNFVEAERLLRIC 441 (510)
Q Consensus 363 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~-g~~~~A~~~~~~a 441 (510)
..+..+.+. ..++.++ .|++++|++.++++++. .|........++.++... +.+++|.+.|.++
T Consensus 132 --~~~~~~~i~---~~l~~l~--~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~~~~~~~a~~~f~~a 196 (281)
T 2c2l_A 132 --RIHQESELH---SYLTRLI--AAERERELEECQRNHEG--------HEDDGHIRAQQACIEAKHDKYMADMDELFSQV 196 (281)
T ss_dssp --CCCCCCHHH---HHHHHHH--HHHHHHHHTTTSGGGTT--------TSCHHHHTHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred --HHhhhHHHH---HHHHHHH--HHHHHHHHHHHHhhhcc--------ccchhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 123333333 3344443 68889999888887763 344445555666666665 7788899999887
Q ss_pred HH
Q 010446 442 LD 443 (510)
Q Consensus 442 l~ 443 (510)
.+
T Consensus 197 ~~ 198 (281)
T 2c2l_A 197 DE 198 (281)
T ss_dssp SC
T ss_pred hc
Confidence 65
No 156
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.26 E-value=1.7e-10 Score=94.20 Aligned_cols=104 Identities=15% Similarity=0.148 Sum_probs=94.2
Q ss_pred CChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 010446 240 TSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTK 319 (510)
Q Consensus 240 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 319 (510)
+.+..+..+..+|.++...|++++|+.+|++++++ .|....++.++|.+|...|++++|+..+++++.+
T Consensus 6 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--- 74 (164)
T 3sz7_A 6 APTPESDKLKSEGNAAMARKEYSKAIDLYTQALSI--------APANPIYLSNRAAAYSASGQHEKAAEDAELATVV--- 74 (164)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred hhhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh---
Confidence 34567888999999999999999999999999997 4566889999999999999999999999999986
Q ss_pred HcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 010446 320 VYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 359 (510)
Q Consensus 320 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 359 (510)
+|....++.++|.++...|++++|+.+|++++++.
T Consensus 75 -----~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 75 -----DPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp -----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 34556789999999999999999999999999985
No 157
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.26 E-value=2.5e-10 Score=90.58 Aligned_cols=104 Identities=14% Similarity=0.019 Sum_probs=93.4
Q ss_pred ChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Q 010446 241 SILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKV 320 (510)
Q Consensus 241 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 320 (510)
+|.....++.+|..+...|++++|+..|++++.. .|....++..+|.++...|++++|+..|++++.+
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---- 81 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCML--------DHYDARYFLGLGACRQSLGLYEQALQSYSYGALM---- 81 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc----
Confidence 4677888999999999999999999999999987 5667888999999999999999999999999986
Q ss_pred cCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 010446 321 YGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIK 360 (510)
Q Consensus 321 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 360 (510)
.|....++.++|.++...|++++|+..|++++.+..
T Consensus 82 ----~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 82 ----DINEPRFPFHAAECHLQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp ----CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ----CCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 234446788999999999999999999999999865
No 158
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.26 E-value=5.2e-11 Score=98.65 Aligned_cols=122 Identities=13% Similarity=0.179 Sum_probs=101.8
Q ss_pred HHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHH
Q 010446 213 YSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFS 292 (510)
Q Consensus 213 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 292 (510)
+...|++++|+..+++++... |....++..+|.+|...|++++|+.++++++++. |....++..
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~ 83 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRAN--------PQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLR--------GENAELYAA 83 (177)
T ss_dssp CC-----CCCCHHHHHHHHHC--------CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH--------CSCHHHHHH
T ss_pred hhhccCHHHHHHHHHHHHHhC--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--------CCCHHHHHH
Confidence 356789999999999998852 3446789999999999999999999999999873 445778899
Q ss_pred HHHH-HHHcCCh--HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 293 LGSL-FIKEGKA--VDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 293 la~~-~~~~g~~--~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
+|.+ +...|++ ++|+..+++++.. .|....++..+|.++...|++++|+.++++++..
T Consensus 84 la~~l~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 84 LATVLYYQASQHMTAQTRAMIDKALAL--------DSNEITALMLLASDAFMQANYAQAIELWQKVMDL 144 (177)
T ss_dssp HHHHHHHHTTTCCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Confidence 9999 8899999 9999999999986 3444578889999999999999999999999987
No 159
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.26 E-value=1.2e-10 Score=94.76 Aligned_cols=109 Identities=17% Similarity=0.132 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCC----------ChhHHHHHHHHHHHHhhcCCHHHHHHHHH
Q 010446 200 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKT----------SILLVTSLLGMAKVLGSIGRAKKAVEIYH 269 (510)
Q Consensus 200 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~----------~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 269 (510)
...+..+...|..++..|++++|+..|.+++.+.......+ .|....++.++|.+|...|++++|+..++
T Consensus 8 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~ 87 (162)
T 3rkv_A 8 LKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSS 87 (162)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 34566789999999999999999999999999865532111 34567889999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 270 RVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKI 316 (510)
Q Consensus 270 ~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 316 (510)
+++++ .|....+++.+|.+|..+|++++|+..|++++.+
T Consensus 88 ~al~~--------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 88 EVLKR--------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhc--------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 99998 5667889999999999999999999999999987
No 160
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.26 E-value=1.3e-10 Score=94.75 Aligned_cols=105 Identities=15% Similarity=-0.014 Sum_probs=93.4
Q ss_pred CCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHH
Q 010446 156 NKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLES 235 (510)
Q Consensus 156 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 235 (510)
...+..+..+..+|.++...|++++|+..|++++.+. |....++..+|.+|...|++++|+.+|++++++.
T Consensus 5 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-- 75 (164)
T 3sz7_A 5 MAPTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIA-------PANPIYLSNRAAAYSASGQHEKAAEDAELATVVD-- 75 (164)
T ss_dssp SSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--
T ss_pred chhhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--
Confidence 3467788999999999999999999999999999875 3345668999999999999999999999999872
Q ss_pred hcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 010446 236 RYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITIL 275 (510)
Q Consensus 236 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 275 (510)
|....++.++|.+|...|++++|+.+|++++++.
T Consensus 76 ------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 76 ------PKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp ------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 4457889999999999999999999999999984
No 161
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.26 E-value=2.8e-12 Score=123.71 Aligned_cols=179 Identities=11% Similarity=-0.000 Sum_probs=129.9
Q ss_pred chHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Q 010446 285 DLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNY 364 (510)
Q Consensus 285 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 364 (510)
..+..+..+|.++...|++++|+.+|++++++ +|....++.++|.++..+|++++|+.++++++++
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l------ 69 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIEL--------NPSNAIYYGNRSLAYLRTECYGYALGDATRAIEL------ 69 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS------
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------
Confidence 34566778889999999999999999999986 3555788999999999999999999999999987
Q ss_pred CCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHH--HHhccCHHHHHHHHH---
Q 010446 365 MSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAAS--YSRSKNFVEAERLLR--- 439 (510)
Q Consensus 365 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~--~~~~g~~~~A~~~~~--- 439 (510)
.++. ..++.++|.+|..+|++++|+..|++++++. |....++..++.+ +..+|++++|++.++
T Consensus 70 -~p~~---~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~--------p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~ 137 (477)
T 1wao_1 70 -DKKY---IKGYYRRAASNMALGKFRAALRDYETVVKVK--------PHDKDAKMKYQECNKIVKQKAFERAIAGDEHKR 137 (477)
T ss_dssp -CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS--------TTCTTHHHHHHHHHHHHHHHHHCCC------CC
T ss_pred -CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 3333 4577899999999999999999999999863 2233456667777 888999999999999
Q ss_pred --------HHHHHHHHHhCCCChh---hHHHHHHHHHHHHhcCChH--HHHHHHHHHHHHHHH
Q 010446 440 --------ICLDIMTKTVGPDDQS---ISFPMLHLGITLYHLNRDK--EAEKLVLEALYIREI 489 (510)
Q Consensus 440 --------~al~~~~~~~~~~~~~---~~~~~~~la~~~~~~g~~~--~A~~~~~~al~~~~~ 489 (510)
+++.+.....++..+. ....+..+...+...+... ++..++.++.++..+
T Consensus 138 ~~~~~~~~~al~~~~~~~~~~~~~~~itl~~l~~lie~l~~~~~l~e~~v~~L~~~a~eil~~ 200 (477)
T 1wao_1 138 SVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSK 200 (477)
T ss_dssp STTTCCTTSSCCCCTTCCSCCCGGGSCCHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHT
T ss_pred hhHhhhhhhhccccccccccccccccccHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHcc
Confidence 5555433333333333 2333444555555555544 445577777777654
No 162
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.26 E-value=3.2e-12 Score=123.34 Aligned_cols=179 Identities=15% Similarity=0.141 Sum_probs=131.5
Q ss_pred hHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcC
Q 010446 243 LLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYG 322 (510)
Q Consensus 243 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 322 (510)
..+..+..+|..+...|++++|+.+|++++++ .|....++.++|.+|..+|++++|+..+++++++
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l------ 69 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIEL--------NPSNAIYYGNRSLAYLRTECYGYALGDATRAIEL------ 69 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS------
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------
Confidence 44556778899999999999999999999997 5666899999999999999999999999999985
Q ss_pred CCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHH--HHHcCChHHHHHHHH---
Q 010446 323 ENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAEL--LHIVGRGQEGRELLE--- 397 (510)
Q Consensus 323 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~--~~~~g~~~~A~~~~~--- 397 (510)
+|....++.++|.+|..+|++++|+..+++++++ .++... ++..++.+ +...|++++|++.++
T Consensus 70 --~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~-------~p~~~~---~~~~l~~~~~~~~~g~~~~A~~~~~~~~ 137 (477)
T 1wao_1 70 --DKKYIKGYYRRAASNMALGKFRAALRDYETVVKV-------KPHDKD---AKMKYQECNKIVKQKAFERAIAGDEHKR 137 (477)
T ss_dssp --CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-------STTCTT---HHHHHHHHHHHHHHHHHCCC------CC
T ss_pred --CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCCCHH---HHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 4556778999999999999999999999999988 233332 34566666 888999999999998
Q ss_pred --------HHHHHHHHhhCCCChh---HHHHHHHHHHHHHhccCH--HHHHHHHHHHHHHHHH
Q 010446 398 --------ECLLITEKYKGKEHPS---FVTHLLNLAASYSRSKNF--VEAERLLRICLDIMTK 447 (510)
Q Consensus 398 --------~al~~~~~~~~~~~~~---~~~~~~~la~~~~~~g~~--~~A~~~~~~al~~~~~ 447 (510)
+++.+.....++..+. .......+...+...+.. ..+..++.++.++..+
T Consensus 138 ~~~~~~~~~al~~~~~~~~~~~~~~~itl~~l~~lie~l~~~~~l~e~~v~~L~~~a~eil~~ 200 (477)
T 1wao_1 138 SVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSK 200 (477)
T ss_dssp STTTCCTTSSCCCCTTCCSCCCGGGSCCHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHT
T ss_pred hhHhhhhhhhccccccccccccccccccHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHcc
Confidence 5555443333333332 233344455555555543 4555577777777654
No 163
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.25 E-value=2e-10 Score=93.43 Aligned_cols=127 Identities=11% Similarity=0.003 Sum_probs=102.4
Q ss_pred ChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcC----CC-------chHHHHHHHHHHHHHHhhhcHHHHHHHH
Q 010446 158 GIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLK----DD-------EPLLDAILLHMGSMYSTLENYEKSMLVY 226 (510)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 226 (510)
....+..+...|..++..|+|++|+..|++++.+..... +. .|....++.++|.+|...|++++|+..+
T Consensus 7 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~ 86 (162)
T 3rkv_A 7 KLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETS 86 (162)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 445678899999999999999999999999998853321 11 3556678999999999999999999999
Q ss_pred HHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchH-HHHHHHHHHHHHc
Q 010446 227 QRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLV-LPLFSLGSLFIKE 300 (510)
Q Consensus 227 ~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~-~~~~~la~~~~~~ 300 (510)
++++.+ +|....+++.+|.+|...|++++|+..|++++++ .|... .+...++.+....
T Consensus 87 ~~al~~--------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l--------~p~~~~~~~~~l~~~~~~~ 145 (162)
T 3rkv_A 87 SEVLKR--------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN--------HPAAASVVAREMKIVTERR 145 (162)
T ss_dssp HHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CGGGHHHHHHHHHHHHHHH
T ss_pred HHHHhc--------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHHH
Confidence 999987 3556789999999999999999999999999998 34444 4455555554443
No 164
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.24 E-value=1.7e-08 Score=90.66 Aligned_cols=235 Identities=11% Similarity=-0.017 Sum_probs=171.1
Q ss_pred HhhCChH-HHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhc----------HHHHHHHHHHHHHHHHHhcCCCC
Q 010446 173 VYIGDLK-FVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLEN----------YEKSMLVYQRVINVLESRYGKTS 241 (510)
Q Consensus 173 ~~~g~~~-~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~~~~~~~~ 241 (510)
...|++. +|+..+..++.+. |....+++..+.+....|. +++++.++..++.. +
T Consensus 40 ~~~~e~s~eaL~~t~~~L~~n-------P~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~--------~ 104 (331)
T 3dss_A 40 RQAGELDESVLELTSQILGAN-------PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV--------N 104 (331)
T ss_dssp HHTTCCSHHHHHHHHHHHTTC-------TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH--------C
T ss_pred HHcCCCCHHHHHHHHHHHHHC-------chhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHh--------C
Confidence 3567776 7899998888664 5666678888888877766 57777777777764 4
Q ss_pred hhHHHHHHHHHHHHhhcC--CHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCC-hHHHHHHHHHHHHHHH
Q 010446 242 ILLVTSLLGMAKVLGSIG--RAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGK-AVDAESVFSRILKIYT 318 (510)
Q Consensus 242 ~~~~~~~~~la~~~~~~g--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-~~~A~~~~~~al~~~~ 318 (510)
|....++...+.++...| .+++++.++.++++. +|....++...+.+....|. +++++.++.++++.
T Consensus 105 PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~--------dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~-- 174 (331)
T 3dss_A 105 PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEA--------DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITR-- 174 (331)
T ss_dssp TTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH--
T ss_pred CCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHH--
Confidence 566788999999999998 489999999999987 67778899999999999999 59999999999985
Q ss_pred HHcCCCChHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHH
Q 010446 319 KVYGENDGRVGMAMCSLAHAKCAN--------------GNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLH 384 (510)
Q Consensus 319 ~~~~~~~~~~~~~~~~la~~~~~~--------------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~ 384 (510)
+|....++++.+.++... +.++++++++.+++.. .|++. .+++.+..++.
T Consensus 175 ------~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~-------~P~d~---SaW~Y~r~ll~ 238 (331)
T 3dss_A 175 ------NFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFT-------DPNDQ---SAWFYHRWLLG 238 (331)
T ss_dssp ------CSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHH-------STTCH---HHHHHHHHHHH
T ss_pred ------CCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHh-------CCCCH---HHHHHHHHHHH
Confidence 466667888888888776 4588999999999987 34443 34444444444
Q ss_pred Hc-----------CChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHH---HhccCHHHHHHHHHHHHHHHHHHhC
Q 010446 385 IV-----------GRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASY---SRSKNFVEAERLLRICLDIMTKTVG 450 (510)
Q Consensus 385 ~~-----------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~---~~~g~~~~A~~~~~~al~~~~~~~~ 450 (510)
.. +.++++++.+++++++. |+...++..++.+. ...|..++...++.+.+++
T Consensus 239 ~~~~~~~~~~~~~~~l~~el~~~~elle~~--------pd~~w~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~------ 304 (331)
T 3dss_A 239 AGSGRCELSVEKSTVLQSELESCKELQELE--------PENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAV------ 304 (331)
T ss_dssp SSSCGGGCCHHHHHHHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHH------
T ss_pred hccCccccchHHHHHHHHHHHHHHHHHhhC--------cccchHHHHHHHHHHhhcccccHHHHHHHHHHHHHh------
Confidence 43 34667777777777652 33344444444332 2467788888999888875
Q ss_pred CCChhhHHHHHHHH
Q 010446 451 PDDQSISFPMLHLG 464 (510)
Q Consensus 451 ~~~~~~~~~~~~la 464 (510)
+|....-|..++
T Consensus 305 --Dp~r~~~y~d~~ 316 (331)
T 3dss_A 305 --DPMRAAYLDDLR 316 (331)
T ss_dssp --CGGGHHHHHHHH
T ss_pred --CcchhhHHHHHH
Confidence 455554444443
No 165
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.24 E-value=4.4e-09 Score=94.82 Aligned_cols=255 Identities=11% Similarity=-0.005 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHhcCC
Q 010446 161 EVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLE-NYEKSMLVYQRVINVLESRYGK 239 (510)
Q Consensus 161 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~al~~~~~~~~~ 239 (510)
...++..+..+....+..++|+..+++++.+. |....+++..+.++...| .+++++.++.+++..
T Consensus 53 y~~~~~~~r~~~~~~e~se~AL~lt~~~L~~n-------P~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~------- 118 (349)
T 3q7a_A 53 YKDAMDYFRAIAAKEEKSERALELTEIIVRMN-------PAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQ------- 118 (349)
T ss_dssp HHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHT-------
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhC-------chhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh-------
Confidence 33344444444445566678999999998875 555677899999999999 599999999999864
Q ss_pred CChhHHHHHHHHHHHHhhc-C-CHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChH--------HHHHH
Q 010446 240 TSILLVTSLLGMAKVLGSI-G-RAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAV--------DAESV 309 (510)
Q Consensus 240 ~~~~~~~~~~~la~~~~~~-g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~--------~A~~~ 309 (510)
+|....+++..+.++... + ++++++.++.++++. +|....++...+.+....|.++ +++++
T Consensus 119 -nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~--------dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~ 189 (349)
T 3q7a_A 119 -NLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLP--------DPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDW 189 (349)
T ss_dssp -TCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSS--------CTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred -CCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhccccccchhhHHHHHHH
Confidence 456678888999999888 7 899999999998865 6677889999999999888888 89999
Q ss_pred HHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHH
Q 010446 310 FSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGN-------AEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAEL 382 (510)
Q Consensus 310 ~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~ 382 (510)
+.++++. ++....+++..+.++...++ ++++++++++++.. .|++ ..++..+..+
T Consensus 190 ~~k~I~~--------dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~-------~P~n---~SaW~Ylr~L 251 (349)
T 3q7a_A 190 CNEMLRV--------DGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHL-------IPHN---VSAWNYLRGF 251 (349)
T ss_dssp HHHHHHH--------CTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHH-------CTTC---HHHHHHHHHH
T ss_pred HHHHHHh--------CCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHh-------CCCC---HHHHHHHHHH
Confidence 9988885 56667889999999999887 78999999999887 3434 3466777788
Q ss_pred HHHcCChHH------------HHH-HHHHHHHHHHHhhCC-----CChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Q 010446 383 LHIVGRGQE------------GRE-LLEECLLITEKYKGK-----EHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDI 444 (510)
Q Consensus 383 ~~~~g~~~~------------A~~-~~~~al~~~~~~~~~-----~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 444 (510)
+...|+... .+. .+........+..+. ..+....++..++.+|...|+.++|.++++...+
T Consensus 252 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~l~d~~~~~~~~~~a~~~~~~l~~- 330 (349)
T 3q7a_A 252 LKHFSLPLVPILPAILPYTASKLNPDIETVEAFGFPMPSDPLPEDTPLPVPLALEYLADSFIEQNRVDDAAKVFEKLSS- 330 (349)
T ss_dssp HHHTTCCSGGGHHHHGGGTC--------------CCCCC-CCCSSCCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-
T ss_pred HHhcCCCcccccccccccccccccccchhHHHHHHHHHhcccccccCCCcHHHHHHHHHHHHhcCCHHHHHHHHHHHHh-
Confidence 877776410 000 011111222222111 1234566888999999999999999999988654
Q ss_pred HHHHhCCCChhhHHHHHHH
Q 010446 445 MTKTVGPDDQSISFPMLHL 463 (510)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~l 463 (510)
.-+|-....+...
T Consensus 331 ------~~dpir~~yw~~~ 343 (349)
T 3q7a_A 331 ------EYDQMRAGYWEFR 343 (349)
T ss_dssp ------TTCGGGHHHHHHH
T ss_pred ------hhChHHHHHHHHH
Confidence 2345555444433
No 166
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.23 E-value=2.1e-09 Score=96.91 Aligned_cols=244 Identities=9% Similarity=-0.044 Sum_probs=180.7
Q ss_pred hHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHHHh
Q 010446 200 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIG-RAKKAVEIYHRVITILELN 278 (510)
Q Consensus 200 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~~~ 278 (510)
+....++..+..+....+..++|+..+.+++.+ +|....+++..+.++...| .+++++.++.+++..
T Consensus 51 ~~y~~~~~~~r~~~~~~e~se~AL~lt~~~L~~--------nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~---- 118 (349)
T 3q7a_A 51 EEYKDAMDYFRAIAAKEEKSERALELTEIIVRM--------NPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQ---- 118 (349)
T ss_dssp HHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHT----
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh--------CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh----
Confidence 445555666666666677778999999999986 3566788999999999999 599999999999975
Q ss_pred cCCCCcchHHHHHHHHHHHHHc-C-ChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHH--------HH
Q 010446 279 RGTESADLVLPLFSLGSLFIKE-G-KAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAE--------EA 348 (510)
Q Consensus 279 ~~~~~~~~~~~~~~la~~~~~~-g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~--------~A 348 (510)
+|....+++..+.++... + ++++++.++.++++ .+|....++...+.+....|.++ ++
T Consensus 119 ----nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~--------~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eE 186 (349)
T 3q7a_A 119 ----NLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLL--------PDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSE 186 (349)
T ss_dssp ----TCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTS--------SCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred ----CCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH--------hCCCCHHHHHHHHHHHHHhccccccchhhHHHH
Confidence 677889999999999988 7 89999999998886 35666788888888888888777 89
Q ss_pred HHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCC-------hHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHH
Q 010446 349 VELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGR-------GQEGRELLEECLLITEKYKGKEHPSFVTHLLNL 421 (510)
Q Consensus 349 ~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 421 (510)
+++++++++. .+.+ ..++...+.++...++ ++++++++++++.+ +|....++..+
T Consensus 187 Le~~~k~I~~-------dp~N---~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~--------~P~n~SaW~Yl 248 (349)
T 3q7a_A 187 LDWCNEMLRV-------DGRN---NSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHL--------IPHNVSAWNYL 248 (349)
T ss_dssp HHHHHHHHHH-------CTTC---HHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHH--------CTTCHHHHHHH
T ss_pred HHHHHHHHHh-------CCCC---HHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHh--------CCCCHHHHHHH
Confidence 9999998887 2222 4577889999998887 67888888888875 46666788888
Q ss_pred HHHHHhccCHHH------------HHH-HHHHHHHHHHHHhCCC-----ChhhHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 010446 422 AASYSRSKNFVE------------AER-LLRICLDIMTKTVGPD-----DQSISFPMLHLGITLYHLNRDKEAEKLVLEA 483 (510)
Q Consensus 422 a~~~~~~g~~~~------------A~~-~~~~al~~~~~~~~~~-----~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 483 (510)
..++...|+... .+. .+....+.+.+..+.. .+....++..++.+|...|+.++|.++++..
T Consensus 249 r~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~l~d~~~~~~~~~~a~~~~~~l 328 (349)
T 3q7a_A 249 RGFLKHFSLPLVPILPAILPYTASKLNPDIETVEAFGFPMPSDPLPEDTPLPVPLALEYLADSFIEQNRVDDAAKVFEKL 328 (349)
T ss_dssp HHHHHHTTCCSGGGHHHHGGGTC--------------CCCCC-CCCSSCCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhcCCCcccccccccccccccccccchhHHHHHHHHHhcccccccCCCcHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 888887776400 000 0111222222222211 2345567889999999999999999888876
Q ss_pred HH
Q 010446 484 LY 485 (510)
Q Consensus 484 l~ 485 (510)
.+
T Consensus 329 ~~ 330 (349)
T 3q7a_A 329 SS 330 (349)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 167
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.21 E-value=9.2e-10 Score=85.55 Aligned_cols=102 Identities=13% Similarity=0.142 Sum_probs=88.8
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCCh
Q 010446 247 SLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDG 326 (510)
Q Consensus 247 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 326 (510)
.++.+|.++...|++++|+..++++++. .++++....++..+|.++...|++++|+..+++++.. .++++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~-----~p~~~ 73 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLEL-----YPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSR-----YPTHD 73 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTST
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-----CCCCc
Confidence 4678899999999999999999999886 3344445578999999999999999999999999985 34555
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 327 RVGMAMCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 327 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
....++..+|.++...|++++|+..+++++..
T Consensus 74 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 74 KAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 55788999999999999999999999999987
No 168
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.19 E-value=5.6e-09 Score=92.22 Aligned_cols=256 Identities=13% Similarity=0.069 Sum_probs=164.0
Q ss_pred HHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 010446 171 GYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLG 250 (510)
Q Consensus 171 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 250 (510)
-.+..|+|..++.-..+ + .+..+.. ....+.+.|..+|++.... .+.|. ..+...
T Consensus 22 n~fy~G~yq~~i~e~~~---~----~~~~~~~--~~~~~~Rs~iAlg~~~~~~---------------~~~~~-~~a~~~ 76 (310)
T 3mv2_B 22 QNYYTGNFVQCLQEIEK---F----SKVTDNT--LLFYKAKTLLALGQYQSQD---------------PTSKL-GKVLDL 76 (310)
T ss_dssp HHHTTTCHHHHTHHHHT---S----SCCCCHH--HHHHHHHHHHHTTCCCCCC---------------SSSTT-HHHHHH
T ss_pred HHHHhhHHHHHHHHHHh---c----CccchHH--HHHHHHHHHHHcCCCccCC---------------CCCHH-HHHHHH
Confidence 34578999998873322 2 2333332 3456677888888877421 12232 223444
Q ss_pred HHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHH
Q 010446 251 MAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGM 330 (510)
Q Consensus 251 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 330 (510)
++..+. ++ |+..+++.++. ..+ ....+..+|.++...|++++|++++.+.+.. ++ .+....
T Consensus 77 la~~~~--~~---a~~~l~~l~~~-------~~~-~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~-----~~-~~~~le 137 (310)
T 3mv2_B 77 YVQFLD--TK---NIEELENLLKD-------KQN-SPYELYLLATAQAILGDLDKSLETCVEGIDN-----DE-AEGTTE 137 (310)
T ss_dssp HHHHHT--TT---CCHHHHHTTTT-------SCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTS-----SC-STTHHH
T ss_pred HHHHhc--cc---HHHHHHHHHhc-------CCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHhcc-----CC-CcCcHH
Confidence 444442 22 55555555432 112 2344568999999999999999999998652 11 136778
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCC---ChHHHHHHHHHH--HHHHHcC--ChHHHHHHHHHHHHHH
Q 010446 331 AMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLD---DSIMENMRIDLA--ELLHIVG--RGQEGRELLEECLLIT 403 (510)
Q Consensus 331 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~---~~~~~~~~~~la--~~~~~~g--~~~~A~~~~~~al~~~ 403 (510)
++..++.++...|+.+.|.+.++++.+. .++ ... .+...++ .+....| ++.+|..+|+++..
T Consensus 138 a~~l~vqi~L~~~r~d~A~k~l~~~~~~-------~~d~~~~~d--~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~-- 206 (310)
T 3mv2_B 138 LLLLAIEVALLNNNVSTASTIFDNYTNA-------IEDTVSGDN--EMILNLAESYIKFATNKETATSNFYYYEELSQ-- 206 (310)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-------SCHHHHHHH--HHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhc-------Cccccccch--HHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH--
Confidence 8888999999999999999999998776 221 001 1223444 3355556 99999999999654
Q ss_pred HHhhCCCChh--HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCC--ChhhHHHHHHHHHHHHhcCChHHHHHH
Q 010446 404 EKYKGKEHPS--FVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPD--DQSISFPMLHLGITLYHLNRDKEAEKL 479 (510)
Q Consensus 404 ~~~~~~~~~~--~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~--~~~~~~~~~~la~~~~~~g~~~~A~~~ 479 (510)
..|. ....+.+ ++..+|++++|...++..++..-.....+ .|....++.+++.+...+|+ +|.++
T Consensus 207 ------~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l 275 (310)
T 3mv2_B 207 ------TFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDL 275 (310)
T ss_dssp ------TSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHH
T ss_pred ------hCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHH
Confidence 2233 2223333 89999999999999997666432210000 24566777888888888997 88888
Q ss_pred HHHHHHHHHHhcCCCCcc
Q 010446 480 VLEALYIREIAFGKDSLP 497 (510)
Q Consensus 480 ~~~al~~~~~~~~~~~~~ 497 (510)
++++.+.. |+||-
T Consensus 276 ~~qL~~~~-----P~hp~ 288 (310)
T 3mv2_B 276 TNQLVKLD-----HEHAF 288 (310)
T ss_dssp HHHHHHTT-----CCCHH
T ss_pred HHHHHHhC-----CCChH
Confidence 88877643 66643
No 169
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.18 E-value=1.5e-09 Score=84.40 Aligned_cols=102 Identities=18% Similarity=0.103 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCC
Q 010446 331 AMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKE 410 (510)
Q Consensus 331 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 410 (510)
++..+|..+...|++++|+..+++++.. .|+++....++..+|.++...|++++|+..|++++... ++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~-------~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~-----p~ 71 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLEL-------YPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRY-----PT 71 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH-------CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHH-------CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHC-----CC
Confidence 4677899999999999999999999887 45566556778999999999999999999999998853 34
Q ss_pred ChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Q 010446 411 HPSFVTHLLNLAASYSRSKNFVEAERLLRICLDI 444 (510)
Q Consensus 411 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 444 (510)
++....++..+|.+|...|++++|+..|++++..
T Consensus 72 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 72 HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4455788999999999999999999999999985
No 170
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.17 E-value=6.2e-09 Score=91.95 Aligned_cols=269 Identities=12% Similarity=0.029 Sum_probs=170.2
Q ss_pred HHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHH
Q 010446 124 EVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLD 203 (510)
Q Consensus 124 ~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~ 203 (510)
.++..+-.|+|..++.-..+ + .+..+. .....+.++|+.+|++... ..+.|..
T Consensus 19 ~ikn~fy~G~yq~~i~e~~~---~-------~~~~~~--~~~~~~~Rs~iAlg~~~~~--------------~~~~~~~- 71 (310)
T 3mv2_B 19 NIKQNYYTGNFVQCLQEIEK---F-------SKVTDN--TLLFYKAKTLLALGQYQSQ--------------DPTSKLG- 71 (310)
T ss_dssp HHHHHHTTTCHHHHTHHHHT---S-------SCCCCH--HHHHHHHHHHHHTTCCCCC--------------CSSSTTH-
T ss_pred HHHHHHHhhHHHHHHHHHHh---c-------CccchH--HHHHHHHHHHHHcCCCccC--------------CCCCHHH-
Confidence 56677889999998873321 1 222333 3556677788889988742 1222332
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCC
Q 010446 204 AILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTES 283 (510)
Q Consensus 204 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 283 (510)
.+...++..+. ++ |+..+++.++ ...+. ..++..+|.++...|++++|+.++.+.+.. ++ .
T Consensus 72 ~a~~~la~~~~--~~---a~~~l~~l~~-------~~~~~-~~~~~~la~i~~~~g~~eeAL~~l~~~i~~-----~~-~ 132 (310)
T 3mv2_B 72 KVLDLYVQFLD--TK---NIEELENLLK-------DKQNS-PYELYLLATAQAILGDLDKSLETCVEGIDN-----DE-A 132 (310)
T ss_dssp HHHHHHHHHHT--TT---CCHHHHHTTT-------TSCCC-HHHHHHHHHHHHHHTCHHHHHHHHHHHHTS-----SC-S
T ss_pred HHHHHHHHHhc--cc---HHHHHHHHHh-------cCCCC-cHHHHHHHHHHHHcCCHHHHHHHHHHHhcc-----CC-C
Confidence 22344444432 22 5666665543 11122 334568999999999999999999998653 11 1
Q ss_pred cchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHh
Q 010446 284 ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANG--NAEEAVELYKKALRVIKD 361 (510)
Q Consensus 284 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g--~~~~A~~~~~~al~~~~~ 361 (510)
+....++..++.++..+|+.+.|.+.++++.+...... ...+...+...-|.+....| ++.+|..+|+++.+.
T Consensus 133 ~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~--~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~--- 207 (310)
T 3mv2_B 133 EGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTV--SGDNEMILNLAESYIKFATNKETATSNFYYYEELSQT--- 207 (310)
T ss_dssp TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHH--HHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT---
T ss_pred cCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccc--ccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh---
Confidence 36778888999999999999999999998876511000 00122223333344455555 999999999996543
Q ss_pred hccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCC--ChhHHHHHHHHHHHHHhccCHHHHHHHHH
Q 010446 362 SNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKE--HPSFVTHLLNLAASYSRSKNFVEAERLLR 439 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~--~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 439 (510)
.++. .....+.+ ++..+|++++|...++..++........+ .|....++.+++.+....|+ +|.++++
T Consensus 208 ----~p~~-~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~ 277 (310)
T 3mv2_B 208 ----FPTW-KTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDLTN 277 (310)
T ss_dssp ----SCSH-HHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHH
T ss_pred ----CCCc-ccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHH
Confidence 2221 11122223 89999999999999997666542210000 25567788888888888897 8889998
Q ss_pred HHHHHHHHHhCCCChhhHH
Q 010446 440 ICLDIMTKTVGPDDQSISF 458 (510)
Q Consensus 440 ~al~~~~~~~~~~~~~~~~ 458 (510)
++.+. .|+||.+..
T Consensus 278 qL~~~-----~P~hp~i~d 291 (310)
T 3mv2_B 278 QLVKL-----DHEHAFIKH 291 (310)
T ss_dssp HHHHT-----TCCCHHHHH
T ss_pred HHHHh-----CCCChHHHH
Confidence 88874 466765543
No 171
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.17 E-value=1.4e-09 Score=83.75 Aligned_cols=118 Identities=20% Similarity=0.378 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCC
Q 010446 244 LVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGE 323 (510)
Q Consensus 244 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 323 (510)
...++..+|.++...|++++|+.++++++.. .|....++..+|.++...|++++|+.++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------- 72 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL------- 72 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-------
Confidence 3677889999999999999999999999986 3445678899999999999999999999999875
Q ss_pred CChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcC
Q 010446 324 NDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVG 387 (510)
Q Consensus 324 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g 387 (510)
.|....++..+|.++...|++++|..++++++.. .++.+ .++..++.++...|
T Consensus 73 -~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-------~~~~~---~~~~~l~~~~~~~g 125 (125)
T 1na0_A 73 -DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL-------DPNNA---EAKQNLGNAKQKQG 125 (125)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------CTTCH---HHHHHHHHHHHHHC
T ss_pred -CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-------CCCcH---HHHHHHHHHHHhcc
Confidence 2333567889999999999999999999999987 33333 35577888776654
No 172
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.17 E-value=6.1e-10 Score=87.63 Aligned_cols=104 Identities=18% Similarity=0.133 Sum_probs=93.2
Q ss_pred hhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHc
Q 010446 242 ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVY 321 (510)
Q Consensus 242 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 321 (510)
+..+..+..+|.++...|++++|+.++++++.. .|....++..+|.++...|++++|+..+++++.+
T Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~----- 72 (137)
T 3q49_B 6 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKMQQPEQALADCRRALEL----- 72 (137)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----
T ss_pred cccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh--------CcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----
Confidence 345778999999999999999999999999997 4556789999999999999999999999999986
Q ss_pred CCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 010446 322 GENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKD 361 (510)
Q Consensus 322 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 361 (510)
.|....++..+|.++...|++++|+..+++++.+...
T Consensus 73 ---~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 73 ---DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp ---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ---CchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 3445678999999999999999999999999998765
No 173
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.17 E-value=1.2e-09 Score=84.18 Aligned_cols=119 Identities=14% Similarity=0.211 Sum_probs=99.4
Q ss_pred hHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCC
Q 010446 160 EEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGK 239 (510)
Q Consensus 160 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 239 (510)
..+.++..+|.++...|++++|+..+++++... |....++..+|.++...|++++|+.++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~------ 73 (125)
T 1na0_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-------PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD------ 73 (125)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-------cCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC------
Confidence 346788999999999999999999999998764 2224458899999999999999999999998752
Q ss_pred CChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcC
Q 010446 240 TSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEG 301 (510)
Q Consensus 240 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 301 (510)
|....++..+|.++...|++++|+.+++++++. .|....++..++.++...|
T Consensus 74 --~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 74 --PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp --TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHC
T ss_pred --CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHhcc
Confidence 333567889999999999999999999999987 4555677888888877654
No 174
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.16 E-value=1.4e-09 Score=84.56 Aligned_cols=106 Identities=8% Similarity=0.152 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCC
Q 010446 244 LVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGE 323 (510)
Q Consensus 244 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 323 (510)
.+..+..+|.++...|++++|+.+++++++. .|....++..+|.++...|++++|+.++++++...... ..
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~ 73 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKEL--------DPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN-RE 73 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS-TT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc-ch
Confidence 4667889999999999999999999999987 34557889999999999999999999999999986543 22
Q ss_pred CChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 324 NDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 324 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
..+....++..+|.++...|++++|..++++++..
T Consensus 74 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 74 DYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 33334788999999999999999999999999986
No 175
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.16 E-value=1.5e-09 Score=85.42 Aligned_cols=102 Identities=16% Similarity=0.140 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCC
Q 010446 202 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT 281 (510)
Q Consensus 202 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 281 (510)
.+..+..+|..+...|++++|+..|++++... |....++.++|.++...|++++|+..+++++++
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~------- 72 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRN--------PLVAVYYTNRALCYLKMQQPEQALADCRRALEL------- 72 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC--------cCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-------
Confidence 35568999999999999999999999999862 444678999999999999999999999999987
Q ss_pred CCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 010446 282 ESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTK 319 (510)
Q Consensus 282 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 319 (510)
.|....++..+|.++...|++++|+..+++++.+...
T Consensus 73 -~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 73 -DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred -CchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 4556789999999999999999999999999998755
No 176
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.16 E-value=1.1e-09 Score=85.07 Aligned_cols=123 Identities=10% Similarity=0.029 Sum_probs=98.4
Q ss_pred hHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCC
Q 010446 160 EEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGK 239 (510)
Q Consensus 160 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 239 (510)
..+..+..+|..+...|++++|+..+++++... |....++..+|.++...|++++|+.++++++...... ..
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~ 73 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELD-------PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN-RE 73 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS-TT
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-------CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc-ch
Confidence 456788999999999999999999999998764 2234568899999999999999999999999987542 22
Q ss_pred CChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHH
Q 010446 240 TSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIK 299 (510)
Q Consensus 240 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~ 299 (510)
+.+....++..+|.++...|++++|+.+++++++. .+ .......++.+...
T Consensus 74 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~-~~~~~~~l~~~~~~ 124 (131)
T 1elr_A 74 DYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE--------HR-TPDVLKKCQQAEKI 124 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CC-CHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CC-CHHHHHHHHHHHHH
Confidence 33344788999999999999999999999999986 22 24455555555443
No 177
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.14 E-value=3.7e-10 Score=86.57 Aligned_cols=97 Identities=10% Similarity=-0.069 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCCh
Q 010446 375 MRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQ 454 (510)
Q Consensus 375 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 454 (510)
.+..+|..+...|++++|+..+++++.. .|....++..+|.++...|++++|+..|++++++ .|
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l--------~P 82 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQK--------EPEREEAWRSLGLTQAENEKDGLAIIALNHARML--------DP 82 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CT
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CC
Confidence 3578999999999999999999999985 4566788999999999999999999999999995 45
Q ss_pred hhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 010446 455 SISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 487 (510)
Q Consensus 455 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 487 (510)
....++..+|.++...|++++|+..+++++++.
T Consensus 83 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 83 KDIAVHAALAVSHTNEHNANAALASLRAWLLSQ 115 (121)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 566788999999999999999999999998754
No 178
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.13 E-value=8.8e-10 Score=102.43 Aligned_cols=133 Identities=13% Similarity=0.139 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhc--------CCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 010446 202 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRY--------GKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVIT 273 (510)
Q Consensus 202 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 273 (510)
.+..+..+|..+...|++++|+..|++++++..... ....+....++.++|.+|..+|++++|+.+++++++
T Consensus 222 ~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 222 ISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 345588999999999999999999999998654420 012456788999999999999999999999999998
Q ss_pred HHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHH
Q 010446 274 ILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVE 350 (510)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 350 (510)
+ .|....+++.+|.+|..+|++++|+..|++++++ .|....++..++.++...++.+++..
T Consensus 302 ~--------~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l--------~P~~~~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 302 I--------DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEI--------APEDKAIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp T--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred h--------CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 4667889999999999999999999999999986 23344567788888888887777654
No 179
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.12 E-value=1.2e-09 Score=101.57 Aligned_cols=133 Identities=11% Similarity=0.047 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhc---------CCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHH
Q 010446 161 EVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSL---------KDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVIN 231 (510)
Q Consensus 161 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 231 (510)
.+..+..+|..+...|++++|+..|++++.+.... ....+....++.++|.+|..+|++++|+.+++++++
T Consensus 222 ~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 222 ISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 35567889999999999999999999999854321 013466778899999999999999999999999997
Q ss_pred HHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHH
Q 010446 232 VLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESV 309 (510)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 309 (510)
+ .|....+++.+|.+|...|++++|+..+++++++ .|....++..++.++...++++++.+.
T Consensus 302 ~--------~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l--------~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 302 I--------DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEI--------APEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp T--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred h--------CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 3556788999999999999999999999999988 455567888899999888888777643
No 180
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.12 E-value=5.8e-10 Score=85.49 Aligned_cols=96 Identities=13% Similarity=-0.004 Sum_probs=85.6
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCch
Q 010446 121 LFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEP 200 (510)
Q Consensus 121 l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 200 (510)
.+..+..+...|++++|+..++++++. .|..+.++..+|.++...|++++|+..+++++.+. |
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~----------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~-------P 82 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQK----------EPEREEAWRSLGLTQAENEKDGLAIIALNHARMLD-------P 82 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH----------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------T
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------C
Confidence 456888899999999999999999998 88889999999999999999999999999999875 3
Q ss_pred HHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHH
Q 010446 201 LLDAILLHMGSMYSTLENYEKSMLVYQRVINVL 233 (510)
Q Consensus 201 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 233 (510)
....++..+|.++...|++++|+..++++++..
T Consensus 83 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 83 KDIAVHAALAVSHTNEHNANAALASLRAWLLSQ 115 (121)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 334568999999999999999999999998753
No 181
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=1.6e-09 Score=86.35 Aligned_cols=119 Identities=10% Similarity=0.007 Sum_probs=97.3
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 010446 326 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEK 405 (510)
Q Consensus 326 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 405 (510)
+.....+..+|..+...|++++|+.+|++++.. .++++....++.++|.++...|++++|+..+++++..
T Consensus 25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-------~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--- 94 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGL-------DATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK--- 94 (148)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTS-------CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-------cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh---
Confidence 445678899999999999999999999999875 4444445678899999999999999999999999886
Q ss_pred hhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHH
Q 010446 406 YKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITL 467 (510)
Q Consensus 406 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 467 (510)
.|....++..+|.++...|++++|+.+|++++.+ .|....++..++.+.
T Consensus 95 -----~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 95 -----DGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSL--------EPKNKVFQEALRNIS 143 (148)
T ss_dssp -----TSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CSSCHHHHHHHHHHH
T ss_pred -----CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCcHHHHHHHHHHH
Confidence 2344678899999999999999999999999985 233344455555544
No 182
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.09 E-value=3.3e-09 Score=80.62 Aligned_cols=112 Identities=13% Similarity=0.036 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCC
Q 010446 203 DAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTE 282 (510)
Q Consensus 203 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 282 (510)
+..++.+|..+...|++++|+..+++++... |....++..+|.++...|++++|+..++++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-------- 67 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLD--------PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDL-------- 67 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHC--------CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHh--------
Confidence 3457899999999999999999999998862 334678899999999999999999999999987
Q ss_pred CcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHH
Q 010446 283 SADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHA 338 (510)
Q Consensus 283 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~ 338 (510)
.|....++..+|.++...|++++|...++++++. .|....++..++.+
T Consensus 68 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~ 115 (118)
T 1elw_A 68 KPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKH--------EANNPQLKEGLQNM 115 (118)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------CTTCHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc--------CCCCHHHHHHHHHh
Confidence 3456788999999999999999999999999874 23334455555554
No 183
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.09 E-value=2.5e-09 Score=81.33 Aligned_cols=114 Identities=12% Similarity=0.049 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCC
Q 010446 161 EVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKT 240 (510)
Q Consensus 161 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 240 (510)
.+..+..+|..+...|++++|+..+++++... |....++..+|.++...|++++|+..++++++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~------- 68 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLD-------PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLK------- 68 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-------
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-------CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhC-------
Confidence 45678899999999999999999999998764 2234568999999999999999999999999862
Q ss_pred ChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHH
Q 010446 241 SILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLF 297 (510)
Q Consensus 241 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 297 (510)
|....++..+|.++...|++++|..+++++++. .|.....+..++.+.
T Consensus 69 -~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 69 -PDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKH--------EANNPQLKEGLQNME 116 (118)
T ss_dssp -TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------CTTCHHHHHHHHHHH
T ss_pred -cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc--------CCCCHHHHHHHHHhh
Confidence 344678899999999999999999999999875 344556666666553
No 184
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=3e-09 Score=84.80 Aligned_cols=120 Identities=17% Similarity=0.096 Sum_probs=99.0
Q ss_pred ChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhc
Q 010446 158 GIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRY 237 (510)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 237 (510)
.+..+..+..+|..+...|++++|+..+++++... ++.+....++..+|.++...|++++|+.++++++...
T Consensus 24 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~----~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~---- 95 (148)
T 2dba_A 24 GASSVEQLRKEGNELFKCGDYGGALAAYTQALGLD----ATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD---- 95 (148)
T ss_dssp TCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSC----CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT----
T ss_pred chHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHc----ccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC----
Confidence 45667889999999999999999999999998763 3334457779999999999999999999999999862
Q ss_pred CCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHH
Q 010446 238 GKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLF 297 (510)
Q Consensus 238 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 297 (510)
|....++..+|.++...|++++|+.++++++++ .|....++..++.+.
T Consensus 96 ----~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 96 ----GGDVKALYRRSQALEKLGRLDQAVLDLQRCVSL--------EPKNKVFQEALRNIS 143 (148)
T ss_dssp ----SCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CSSCHHHHHHHHHHH
T ss_pred ----ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCcHHHHHHHHHHH
Confidence 334678899999999999999999999999987 344455555555554
No 185
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=99.06 E-value=1.7e-07 Score=93.31 Aligned_cols=230 Identities=10% Similarity=0.069 Sum_probs=169.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHH-HHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHH
Q 010446 220 EKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAV-EIYHRVITILELNRGTESADLVLPLFSLGSLFI 298 (510)
Q Consensus 220 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 298 (510)
......|++++... |.....+...+..+...|+.++|. ..|++|+.. .|.....+...+....
T Consensus 326 ~Rv~~~Ye~aL~~~--------p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~--------~P~s~~Lwl~~a~~ee 389 (679)
T 4e6h_A 326 ARMTYVYMQAAQHV--------CFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQC--------IPNSAVLAFSLSEQYE 389 (679)
T ss_dssp HHHHHHHHHHHHHT--------TTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHH--------CTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHH
Confidence 34567788888753 445677888899999999999997 999999875 3444567788899999
Q ss_pred HcCChHHHHHHHHHHHHHHHHHc------CCCC--------hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Q 010446 299 KEGKAVDAESVFSRILKIYTKVY------GEND--------GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNY 364 (510)
Q Consensus 299 ~~g~~~~A~~~~~~al~~~~~~~------~~~~--------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 364 (510)
..|++++|...|++++....... .+.. .....++...+.+..+.|..+.|...|.+|++...
T Consensus 390 ~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~---- 465 (679)
T 4e6h_A 390 LNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKK---- 465 (679)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGG----
T ss_pred HhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcC----
Confidence 99999999999999998642111 0111 12445677778888888999999999999987511
Q ss_pred CCCCChHHHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Q 010446 365 MSLDDSIMENMRIDLAELLHIVG-RGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLD 443 (510)
Q Consensus 365 ~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 443 (510)
... ..++...|.+....| +.+.|..+|+++++... .. ...+...+......|+.+.|..+|++++.
T Consensus 466 --~~~---~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p-----~~---~~~w~~y~~fe~~~~~~~~AR~lferal~ 532 (679)
T 4e6h_A 466 --LVT---PDIYLENAYIEYHISKDTKTACKVLELGLKYFA-----TD---GEYINKYLDFLIYVNEESQVKSLFESSID 532 (679)
T ss_dssp --GSC---THHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHT-----TC---HHHHHHHHHHHHHHTCHHHHHHHHHHHTT
T ss_pred --CCC---hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCC-----Cc---hHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 111 123445566666655 58999999999998752 22 33455667778888999999999999987
Q ss_pred HHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 010446 444 IMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 487 (510)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 487 (510)
.. ++.......+......-...|+.+.+....+++.+..
T Consensus 533 ~~-----~~~~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~~~~~ 571 (679)
T 4e6h_A 533 KI-----SDSHLLKMIFQKVIFFESKVGSLNSVRTLEKRFFEKF 571 (679)
T ss_dssp TS-----SSTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHS
T ss_pred hc-----CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 31 1112455667777777888999999999999988765
No 186
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.05 E-value=6.3e-10 Score=102.32 Aligned_cols=144 Identities=17% Similarity=0.083 Sum_probs=88.4
Q ss_pred hHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcC--CC-------ChhHHHHHHHHHHHHhhcCCHHHHHHHHHH
Q 010446 200 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYG--KT-------SILLVTSLLGMAKVLGSIGRAKKAVEIYHR 270 (510)
Q Consensus 200 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~--~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 270 (510)
+..+..+..+|..+...|++++|+..|++++.+...... .. ......++.++|.+|...|++++|+.++++
T Consensus 176 ~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~ 255 (338)
T 2if4_A 176 IGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNI 255 (338)
T ss_dssp HHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 345666889999999999999999999999987422100 00 000114889999999999999999999999
Q ss_pred HHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHH-HHHCCCHHHHH
Q 010446 271 VITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHA-KCANGNAEEAV 349 (510)
Q Consensus 271 al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~-~~~~g~~~~A~ 349 (510)
++++ .|....+++++|.+|..+|++++|+..|++++++ .|....++..++.+ ....+..+++.
T Consensus 256 al~~--------~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l--------~p~~~~a~~~L~~l~~~~~~~~~~a~ 319 (338)
T 2if4_A 256 VLTE--------EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKY--------APDDKAIRRELRALAEQEKALYQKQK 319 (338)
T ss_dssp HHHH--------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------------------------
T ss_pred HHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9987 4566889999999999999999999999999875 24445667777777 44566778888
Q ss_pred HHHHHHHHHH
Q 010446 350 ELYKKALRVI 359 (510)
Q Consensus 350 ~~~~~al~~~ 359 (510)
..|.+++...
T Consensus 320 ~~~~~~l~~~ 329 (338)
T 2if4_A 320 EMYKGIFKGK 329 (338)
T ss_dssp ----------
T ss_pred HHHHHhhCCC
Confidence 8998888764
No 187
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.04 E-value=6.7e-10 Score=102.13 Aligned_cols=143 Identities=11% Similarity=0.050 Sum_probs=87.4
Q ss_pred hhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcC--CCc--------hHHHHHHHHHHHHHHhhhcHHHHHHHHHH
Q 010446 159 IEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLK--DDE--------PLLDAILLHMGSMYSTLENYEKSMLVYQR 228 (510)
Q Consensus 159 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~--~~~--------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 228 (510)
+..+..+..+|..++..|++++|+..|++++.+..... ... .....+++++|.+|...|++++|+.++++
T Consensus 176 ~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~ 255 (338)
T 2if4_A 176 IGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNI 255 (338)
T ss_dssp HHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 44566788999999999999999999999988752100 000 00113689999999999999999999999
Q ss_pred HHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHH-HHHcCChHHHH
Q 010446 229 VINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSL-FIKEGKAVDAE 307 (510)
Q Consensus 229 al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~-~~~~g~~~~A~ 307 (510)
++++ +|....+++++|.+|...|++++|+..|++++++ .|....++..++.+ ....+..+++.
T Consensus 256 al~~--------~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l--------~p~~~~a~~~L~~l~~~~~~~~~~a~ 319 (338)
T 2if4_A 256 VLTE--------EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKY--------APDDKAIRRELRALAEQEKALYQKQK 319 (338)
T ss_dssp HHHH--------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------------------------
T ss_pred HHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9986 2455788999999999999999999999999887 34456677778877 44566778888
Q ss_pred HHHHHHHHHH
Q 010446 308 SVFSRILKIY 317 (510)
Q Consensus 308 ~~~~~al~~~ 317 (510)
..|.+++...
T Consensus 320 ~~~~~~l~~~ 329 (338)
T 2if4_A 320 EMYKGIFKGK 329 (338)
T ss_dssp ----------
T ss_pred HHHHHhhCCC
Confidence 8888887753
No 188
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.03 E-value=6.5e-09 Score=102.00 Aligned_cols=189 Identities=10% Similarity=-0.023 Sum_probs=156.8
Q ss_pred HHHHHHHHHHHHHcCCh-hHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCC----------hHHHHHHHH
Q 010446 118 LLELFNEVKSMIMMGNK-NDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGD----------LKFVQSLLD 186 (510)
Q Consensus 118 ~~~l~~~~~~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~----------~~~A~~~~~ 186 (510)
+..+..........|++ ++|+..+++++.. .|+...+|+..+.++...|+ +++++..++
T Consensus 28 y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~----------nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~ 97 (567)
T 1dce_A 28 YQSATQAVFQKRQAGELDESVLELTSQILGA----------NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLE 97 (567)
T ss_dssp HHHHHHHHHHHHHTTCCSHHHHHHHHHHHHH----------CTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH----------CchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHH
Confidence 34444555556667766 5679999999998 99999999999999999988 899999999
Q ss_pred HHHHhhhhcCCCchHHHHHHHHHHHHHHhhh--cHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcC-CHHH
Q 010446 187 MMSGIVDSLKDDEPLLDAILLHMGSMYSTLE--NYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIG-RAKK 263 (510)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~ 263 (510)
+++... |....+|+..+.++...| ++++++..+.++++. +|....+|...+.+....| .+++
T Consensus 98 ~~l~~~-------pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~--------d~~N~~aW~~R~~~l~~l~~~~~~ 162 (567)
T 1dce_A 98 SCLRVN-------PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEA--------DERNFHCWDYRRFVAAQAAVAPAE 162 (567)
T ss_dssp HHHHHC-------TTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTCCCHHH
T ss_pred HHHHhC-------CCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhh--------ccccccHHHHHHHHHHHcCCChHH
Confidence 998764 555667999999999999 779999999999986 3556788999999999999 9999
Q ss_pred HHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHc--------------CChHHHHHHHHHHHHHHHHHcCCCChHHH
Q 010446 264 AVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKE--------------GKAVDAESVFSRILKIYTKVYGENDGRVG 329 (510)
Q Consensus 264 A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~--------------g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 329 (510)
+++++.++++. +|....+|+..+.++... +.++++++++.+++.+ .|...
T Consensus 163 el~~~~~~I~~--------~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~--------~P~~~ 226 (567)
T 1dce_A 163 ELAFTDSLITR--------NFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFT--------DPNDQ 226 (567)
T ss_dssp HHHHHHTTTTT--------TCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHH--------CSSCS
T ss_pred HHHHHHHHHHH--------CCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhh--------CCCCc
Confidence 99999999875 677789999999998875 5578999999999886 34445
Q ss_pred HHHHHHHHHHHHCCCHHH
Q 010446 330 MAMCSLAHAKCANGNAEE 347 (510)
Q Consensus 330 ~~~~~la~~~~~~g~~~~ 347 (510)
.+|+.++.++...+++++
T Consensus 227 saW~y~~~ll~~~~~~~~ 244 (567)
T 1dce_A 227 SAWFYHRWLLGRAEPHDV 244 (567)
T ss_dssp HHHHHHHHHHSCCCCCSC
T ss_pred cHHHHHHHHHhcCCCccc
Confidence 788889999988888555
No 189
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.98 E-value=3.3e-09 Score=80.79 Aligned_cols=90 Identities=20% Similarity=0.162 Sum_probs=74.9
Q ss_pred hhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 010446 174 YIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAK 253 (510)
Q Consensus 174 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 253 (510)
..|++++|+..|++++... .+.|....++..+|.++...|++++|+.+|+++++.. |....++.++|.
T Consensus 2 ~~g~~~~A~~~~~~al~~~----~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~l~~ 69 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASG----LQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQF--------PNHQALRVFYAM 69 (117)
T ss_dssp -----CCCHHHHHHHHSSC----CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcC----CCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCchHHHHHHHH
Confidence 4689999999999998752 2347788889999999999999999999999999872 444778999999
Q ss_pred HHhhcCCHHHHHHHHHHHHHHH
Q 010446 254 VLGSIGRAKKAVEIYHRVITIL 275 (510)
Q Consensus 254 ~~~~~g~~~~A~~~~~~al~~~ 275 (510)
++...|++++|+..+++++...
T Consensus 70 ~~~~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 70 VLYNLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhC
Confidence 9999999999999999999873
No 190
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.98 E-value=1.4e-09 Score=81.86 Aligned_cols=98 Identities=10% Similarity=0.053 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCC
Q 010446 245 VTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEN 324 (510)
Q Consensus 245 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 324 (510)
..++..+|.++...|++++|+.+++++++. .|....++..+|.++...|++++|+.+++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-------- 69 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQL--------DPEESKYWLMKGKALYNLERYEEAVDCYNYVINV-------- 69 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--------
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHh--------CcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------
Confidence 456778999999999999999999999987 3455778999999999999999999999999985
Q ss_pred ChH--HHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHH
Q 010446 325 DGR--VGMAMCSLAHAKCAN-GNAEEAVELYKKALRV 358 (510)
Q Consensus 325 ~~~--~~~~~~~la~~~~~~-g~~~~A~~~~~~al~~ 358 (510)
.|. ...++..+|.++... |++++|++++++++..
T Consensus 70 ~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 70 IEDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp SCCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGG
T ss_pred CcccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhc
Confidence 233 457889999999999 9999999999998875
No 191
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.96 E-value=2.5e-08 Score=97.89 Aligned_cols=174 Identities=7% Similarity=-0.054 Sum_probs=146.8
Q ss_pred CHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCC----------hHHHHHHHHHHHHHHHHHcCCCChHHH
Q 010446 260 RAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGK----------AVDAESVFSRILKIYTKVYGENDGRVG 329 (510)
Q Consensus 260 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~----------~~~A~~~~~~al~~~~~~~~~~~~~~~ 329 (510)
..++|++.+.+++.+ .|....+|+..+.++...|+ +++++..++++++. +|...
T Consensus 44 ~~eeal~~~~~~l~~--------nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~--------~pK~y 107 (567)
T 1dce_A 44 LDESVLELTSQILGA--------NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV--------NPKSY 107 (567)
T ss_dssp CSHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH--------CTTCH
T ss_pred CCHHHHHHHHHHHHH--------CchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHh--------CCCCH
Confidence 346789999999987 67788999999999999988 89999999999875 56677
Q ss_pred HHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHh
Q 010446 330 MAMCSLAHAKCANG--NAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVG-RGQEGRELLEECLLITEKY 406 (510)
Q Consensus 330 ~~~~~la~~~~~~g--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~~~ 406 (510)
.+|...+.++...| ++++++++++++++.. +.. ..+|...+.++...| .+++++++++++++
T Consensus 108 ~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d-------~~N---~~aW~~R~~~l~~l~~~~~~el~~~~~~I~----- 172 (567)
T 1dce_A 108 GTWHHRCWLLSRLPEPNWARELELCARFLEAD-------ERN---FHCWDYRRFVAAQAAVAPAEELAFTDSLIT----- 172 (567)
T ss_dssp HHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHC-------TTC---HHHHHHHHHHHHHTCCCHHHHHHHHHTTTT-----
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHhhc-------ccc---ccHHHHHHHHHHHcCCChHHHHHHHHHHHH-----
Confidence 89999999999999 7799999999999982 222 567888999999999 89999999988876
Q ss_pred hCCCChhHHHHHHHHHHHHHhc--------------cCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCC
Q 010446 407 KGKEHPSFVTHLLNLAASYSRS--------------KNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNR 472 (510)
Q Consensus 407 ~~~~~~~~~~~~~~la~~~~~~--------------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 472 (510)
.+|....+|...+.++... +.+++|++++.+++.+ .|....+|..++.++...++
T Consensus 173 ---~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~--------~P~~~saW~y~~~ll~~~~~ 241 (567)
T 1dce_A 173 ---RNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFT--------DPNDQSAWFYHRWLLGRAEP 241 (567)
T ss_dssp ---TTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHH--------CSSCSHHHHHHHHHHSCCCC
T ss_pred ---HCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhh--------CCCCccHHHHHHHHHhcCCC
Confidence 3566778899999988874 6689999999999985 45566788999999999888
Q ss_pred hHH
Q 010446 473 DKE 475 (510)
Q Consensus 473 ~~~ 475 (510)
+++
T Consensus 242 ~~~ 244 (567)
T 1dce_A 242 HDV 244 (567)
T ss_dssp CSC
T ss_pred ccc
Confidence 665
No 192
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.96 E-value=1.4e-07 Score=93.82 Aligned_cols=229 Identities=10% Similarity=-0.002 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHH-HHHHHHHHhhhhcCCCchHHHHHHHHHHHHHH
Q 010446 136 DAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQ-SLLDMMSGIVDSLKDDEPLLDAILLHMGSMYS 214 (510)
Q Consensus 136 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 214 (510)
.....|++++.. .|..+.+|...+......|+.++|. .+|++++... |.....+...+....
T Consensus 327 Rv~~~Ye~aL~~----------~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~-------P~s~~Lwl~~a~~ee 389 (679)
T 4e6h_A 327 RMTYVYMQAAQH----------VCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCI-------PNSAVLAFSLSEQYE 389 (679)
T ss_dssp HHHHHHHHHHHH----------TTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHC-------TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----------cCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHH
Confidence 455678888876 6777889999999999999999997 9999998654 222344678888899
Q ss_pred hhhcHHHHHHHHHHHHHHHHHhc------CCCC--------hhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcC
Q 010446 215 TLENYEKSMLVYQRVINVLESRY------GKTS--------ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRG 280 (510)
Q Consensus 215 ~~g~~~~A~~~~~~al~~~~~~~------~~~~--------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 280 (510)
..|++++|...|++++....... .+.. .....++...+......|+.+.|...+.+|++..
T Consensus 390 ~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~----- 464 (679)
T 4e6h_A 390 LNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLK----- 464 (679)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTG-----
T ss_pred HhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc-----
Confidence 99999999999999998642111 0110 1244567777888888999999999999998641
Q ss_pred CCCcchHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 010446 281 TESADLVLPLFSLGSLFIKEG-KAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 359 (510)
Q Consensus 281 ~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 359 (510)
.+.....+...|.+....+ +++.|..+|+++++.+ ++.+. .+...+......|+.+.|..+|++++...
T Consensus 465 --~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~-----p~~~~---~w~~y~~fe~~~~~~~~AR~lferal~~~ 534 (679)
T 4e6h_A 465 --KLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYF-----ATDGE---YINKYLDFLIYVNEESQVKSLFESSIDKI 534 (679)
T ss_dssp --GGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHH-----TTCHH---HHHHHHHHHHHHTCHHHHHHHHHHHTTTS
T ss_pred --CCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHC-----CCchH---HHHHHHHHHHhCCCHHHHHHHHHHHHHhc
Confidence 1122345556666666665 4899999999999974 23333 34555667778899999999999998752
Q ss_pred HhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q 010446 360 KDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLIT 403 (510)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 403 (510)
++......++......-...|+.+.+..+.+++.+..
T Consensus 535 -------~~~~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~~~~~ 571 (679)
T 4e6h_A 535 -------SDSHLLKMIFQKVIFFESKVGSLNSVRTLEKRFFEKF 571 (679)
T ss_dssp -------SSTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHS
T ss_pred -------CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 2223445677778888889999999999999988764
No 193
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.94 E-value=1.8e-09 Score=81.24 Aligned_cols=97 Identities=22% Similarity=0.158 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCC
Q 010446 204 AILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTES 283 (510)
Q Consensus 204 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 283 (510)
.++..+|.++...|++++|+.+++++++.. |....++..+|.++...|++++|+.+++++++. .
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~--------~ 70 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLD--------PEESKYWLMKGKALYNLERYEEAVDCYNYVINV--------I 70 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--------S
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhC--------cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------C
Confidence 347889999999999999999999999862 333567899999999999999999999999986 3
Q ss_pred cc--hHHHHHHHHHHHHHc-CChHHHHHHHHHHHHH
Q 010446 284 AD--LVLPLFSLGSLFIKE-GKAVDAESVFSRILKI 316 (510)
Q Consensus 284 ~~--~~~~~~~la~~~~~~-g~~~~A~~~~~~al~~ 316 (510)
|. ...++..+|.++... |++++|+.++++++..
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 71 EDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp CCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGG
T ss_pred cccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhc
Confidence 44 678899999999999 9999999999998864
No 194
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.93 E-value=2.6e-09 Score=81.39 Aligned_cols=90 Identities=13% Similarity=0.213 Sum_probs=74.7
Q ss_pred HcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHH
Q 010446 130 MMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHM 209 (510)
Q Consensus 130 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l 209 (510)
..|++++|+..|+++++. +...|..+.++..+|.++...|++++|+..+++++... |....+++.+
T Consensus 2 ~~g~~~~A~~~~~~al~~-------~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~~l 67 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIAS-------GLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQF-------PNHQALRVFY 67 (117)
T ss_dssp -----CCCHHHHHHHHSS-------CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------TTCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHc-------CCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCchHHHHHH
Confidence 468999999999999875 23358889999999999999999999999999999875 3335568999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHHH
Q 010446 210 GSMYSTLENYEKSMLVYQRVINVL 233 (510)
Q Consensus 210 ~~~~~~~g~~~~A~~~~~~al~~~ 233 (510)
|.++...|++++|+..+++++...
T Consensus 68 ~~~~~~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 68 AMVLYNLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhC
Confidence 999999999999999999999874
No 195
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.88 E-value=7.6e-09 Score=81.10 Aligned_cols=86 Identities=10% Similarity=0.123 Sum_probs=76.2
Q ss_pred HcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCCh----------HHHHHHHHHHHHhhhhcCCCc
Q 010446 130 MMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDL----------KFVQSLLDMMSGIVDSLKDDE 199 (510)
Q Consensus 130 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~----------~~A~~~~~~~~~~~~~~~~~~ 199 (510)
+.+.+++|+..+++++++ .|..+.++.++|.++...|++ ++|+..|++++++.
T Consensus 14 r~~~feeA~~~~~~Ai~l----------~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ld------- 76 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKS----------NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLID------- 76 (158)
T ss_dssp HHHHHHHHHHHHHHHHHH----------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHhHHHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhC-------
Confidence 456789999999999998 899999999999999998876 49999999999885
Q ss_pred hHHHHHHHHHHHHHHhhh-----------cHHHHHHHHHHHHHH
Q 010446 200 PLLDAILLHMGSMYSTLE-----------NYEKSMLVYQRVINV 232 (510)
Q Consensus 200 ~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~ 232 (510)
|....+++++|.+|..+| ++++|+.+|++|+++
T Consensus 77 P~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l 120 (158)
T 1zu2_A 77 PKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE 120 (158)
T ss_dssp TTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh
Confidence 556677999999999885 899999999999987
No 196
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.81 E-value=1.2e-08 Score=79.92 Aligned_cols=86 Identities=15% Similarity=0.114 Sum_probs=75.7
Q ss_pred hcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCCh----------HHHHHHHHHHHHHHHHHcCCCCh
Q 010446 257 SIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKA----------VDAESVFSRILKIYTKVYGENDG 326 (510)
Q Consensus 257 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~~ 326 (510)
+.+.+++|+..+++++++ .|..+.+++++|.++...+++ ++|+..|++++++ +|
T Consensus 14 r~~~feeA~~~~~~Ai~l--------~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l--------dP 77 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKS--------NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI--------DP 77 (158)
T ss_dssp HHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH--------CT
T ss_pred HHhHHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh--------Cc
Confidence 456799999999999998 677889999999999999876 4999999999986 46
Q ss_pred HHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHH
Q 010446 327 RVGMAMCSLAHAKCANG-----------NAEEAVELYKKALRV 358 (510)
Q Consensus 327 ~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~al~~ 358 (510)
....+++++|.+|..+| ++++|+.+|++|+++
T Consensus 78 ~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l 120 (158)
T 1zu2_A 78 KKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE 120 (158)
T ss_dssp TCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh
Confidence 67789999999999875 899999999999998
No 197
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.77 E-value=9.5e-08 Score=68.60 Aligned_cols=86 Identities=19% Similarity=0.301 Sum_probs=73.1
Q ss_pred hhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHc
Q 010446 242 ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVY 321 (510)
Q Consensus 242 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 321 (510)
+....++..+|.++...|++++|+.+++++++. .|....++..+|.++...|++++|+.++++++++
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~----- 72 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL----- 72 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-----
Confidence 456778999999999999999999999999987 3455788999999999999999999999999986
Q ss_pred CCCChHHHHHHHHHHHHHHHCC
Q 010446 322 GENDGRVGMAMCSLAHAKCANG 343 (510)
Q Consensus 322 ~~~~~~~~~~~~~la~~~~~~g 343 (510)
.|....++.++|.++...|
T Consensus 73 ---~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 73 ---DPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp ---CTTCHHHHHHHHHHHHHHC
T ss_pred ---CCCCHHHHHHHHHHHHhcC
Confidence 2444567788888887654
No 198
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.75 E-value=1.3e-07 Score=67.81 Aligned_cols=86 Identities=15% Similarity=0.261 Sum_probs=73.4
Q ss_pred hHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhc
Q 010446 200 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNR 279 (510)
Q Consensus 200 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 279 (510)
+....+++.+|.++...|++++|+.+++++++.. |....++..+|.++...|++++|+.++++++++
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~----- 72 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD--------PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL----- 72 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-----
Confidence 4556678999999999999999999999999862 334678899999999999999999999999987
Q ss_pred CCCCcchHHHHHHHHHHHHHcC
Q 010446 280 GTESADLVLPLFSLGSLFIKEG 301 (510)
Q Consensus 280 ~~~~~~~~~~~~~la~~~~~~g 301 (510)
.|....++.++|.++...|
T Consensus 73 ---~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 73 ---DPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp ---CTTCHHHHHHHHHHHHHHC
T ss_pred ---CCCCHHHHHHHHHHHHhcC
Confidence 4556778889999887654
No 199
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.73 E-value=9.6e-09 Score=77.20 Aligned_cols=93 Identities=11% Similarity=0.033 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCC
Q 010446 203 DAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTE 282 (510)
Q Consensus 203 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 282 (510)
+..+..+|.++...|++++|+..|+++++.. |....++.++|.++...|++++|+..+++++++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-------- 67 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQ--------PQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY-------- 67 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------
Confidence 3458899999999999999999999999862 344678999999999999999999999999986
Q ss_pred Ccch------HHHHHHHHHHHHHcCChHHHHHHHH
Q 010446 283 SADL------VLPLFSLGSLFIKEGKAVDAESVFS 311 (510)
Q Consensus 283 ~~~~------~~~~~~la~~~~~~g~~~~A~~~~~ 311 (510)
.|.. ..++..+|.++...|++++|+..++
T Consensus 68 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 68 TSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp CSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSS
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHH
Confidence 2333 6778899999999998887765544
No 200
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.72 E-value=1.3e-08 Score=76.44 Aligned_cols=96 Identities=11% Similarity=-0.004 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCC
Q 010446 373 ENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPD 452 (510)
Q Consensus 373 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 452 (510)
...+..+|.++...|++++|+..|++++.+ .|....++.++|.++...|++++|+..+++++.+ .++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~ 70 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITA--------QPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY-----TST 70 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS-----CSS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCC
Confidence 356788999999999999999999999986 3445678999999999999999999999999984 122
Q ss_pred C---hhhHHHHHHHHHHHHhcCChHHHHHHHH
Q 010446 453 D---QSISFPMLHLGITLYHLNRDKEAEKLVL 481 (510)
Q Consensus 453 ~---~~~~~~~~~la~~~~~~g~~~~A~~~~~ 481 (510)
+ .....++..+|.++...|++++|+..++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 71 AEHVAIRSKLQYRLELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHH
Confidence 2 1126778899999999998888766544
No 201
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.70 E-value=7.9e-08 Score=72.73 Aligned_cols=84 Identities=10% Similarity=0.091 Sum_probs=72.4
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHH
Q 010446 135 NDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYS 214 (510)
Q Consensus 135 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 214 (510)
++|+..|+++++. .|..+.++..+|.++...|++++|+..+++++... |....+++.+|.++.
T Consensus 2 ~~a~~~~~~al~~----------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-------p~~~~~~~~la~~~~ 64 (115)
T 2kat_A 2 QAITERLEAMLAQ----------GTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFD-------PTYSVAWKWLGKTLQ 64 (115)
T ss_dssp CCHHHHHHHHHTT----------TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHh----------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC-------CCcHHHHHHHHHHHH
Confidence 3577888888776 66778899999999999999999999999999874 333556899999999
Q ss_pred hhhcHHHHHHHHHHHHHHHHH
Q 010446 215 TLENYEKSMLVYQRVINVLES 235 (510)
Q Consensus 215 ~~g~~~~A~~~~~~al~~~~~ 235 (510)
..|++++|+..|++++++...
T Consensus 65 ~~g~~~~A~~~~~~al~~~~~ 85 (115)
T 2kat_A 65 GQGDRAGARQAWESGLAAAQS 85 (115)
T ss_dssp HHTCHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhccc
Confidence 999999999999999988654
No 202
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.69 E-value=3.9e-07 Score=71.30 Aligned_cols=111 Identities=16% Similarity=0.193 Sum_probs=93.6
Q ss_pred hhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHH
Q 010446 216 LENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGS 295 (510)
Q Consensus 216 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 295 (510)
.+++++|+.+|+++.+. .++. +. +|.+|...+.+++|+.+|+++.+. ....+++++|.
T Consensus 8 ~~d~~~A~~~~~~aa~~-------g~~~---a~--lg~~y~~g~~~~~A~~~~~~Aa~~----------g~~~a~~~Lg~ 65 (138)
T 1klx_A 8 KKDLKKAIQYYVKACEL-------NEMF---GC--LSLVSNSQINKQKLFQYLSKACEL----------NSGNGCRFLGD 65 (138)
T ss_dssp HHHHHHHHHHHHHHHHT-------TCTT---HH--HHHHTCTTSCHHHHHHHHHHHHHT----------TCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHcC-------CCHh---hh--HHHHHHcCCCHHHHHHHHHHHHcC----------CCHHHHHHHHH
Confidence 46889999999999864 2222 22 999999999999999999999875 23688999999
Q ss_pred HHHH----cCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHH
Q 010446 296 LFIK----EGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA----NGNAEEAVELYKKALRV 358 (510)
Q Consensus 296 ~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 358 (510)
+|.. .+++++|+.+|+++.+. . ...++.+||.+|.. .+++++|+.+|+++.+.
T Consensus 66 ~y~~G~g~~~d~~~A~~~~~~Aa~~-------g---~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 66 FYENGKYVKKDLRKAAQYYSKACGL-------N---DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHCSSSCCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHcCCCCCccHHHHHHHHHHHHcC-------C---CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 9998 89999999999999873 2 24678999999999 89999999999999875
No 203
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.65 E-value=1.8e-07 Score=70.72 Aligned_cols=84 Identities=25% Similarity=0.196 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHh
Q 010446 390 QEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYH 469 (510)
Q Consensus 390 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~ 469 (510)
++|+..|++++.. .|....++..+|.+|...|++++|+.+|++++.+ .|....++..+|.++..
T Consensus 2 ~~a~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~ 65 (115)
T 2kat_A 2 QAITERLEAMLAQ--------GTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDF--------DPTYSVAWKWLGKTLQG 65 (115)
T ss_dssp CCHHHHHHHHHTT--------TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHH
Confidence 3577778877763 3555678999999999999999999999999985 45567788999999999
Q ss_pred cCChHHHHHHHHHHHHHHHH
Q 010446 470 LNRDKEAEKLVLEALYIREI 489 (510)
Q Consensus 470 ~g~~~~A~~~~~~al~~~~~ 489 (510)
.|++++|..+|++++++...
T Consensus 66 ~g~~~~A~~~~~~al~~~~~ 85 (115)
T 2kat_A 66 QGDRAGARQAWESGLAAAQS 85 (115)
T ss_dssp HTCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhccc
Confidence 99999999999999998765
No 204
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.65 E-value=3.9e-07 Score=71.34 Aligned_cols=110 Identities=17% Similarity=0.131 Sum_probs=91.4
Q ss_pred CCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHH
Q 010446 343 GNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLA 422 (510)
Q Consensus 343 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la 422 (510)
+++++|+.+|+++.+. + ++ . +. +|.+|...+..++|+.+|+++.+. ....++.+||
T Consensus 9 ~d~~~A~~~~~~aa~~-------g-~~-~---a~--lg~~y~~g~~~~~A~~~~~~Aa~~----------g~~~a~~~Lg 64 (138)
T 1klx_A 9 KDLKKAIQYYVKACEL-------N-EM-F---GC--LSLVSNSQINKQKLFQYLSKACEL----------NSGNGCRFLG 64 (138)
T ss_dssp HHHHHHHHHHHHHHHT-------T-CT-T---HH--HHHHTCTTSCHHHHHHHHHHHHHT----------TCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcC-------C-CH-h---hh--HHHHHHcCCCHHHHHHHHHHHHcC----------CCHHHHHHHH
Confidence 4678999999998865 2 11 1 11 899999999999999999999763 2357889999
Q ss_pred HHHHh----ccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHh----cCChHHHHHHHHHHHHH
Q 010446 423 ASYSR----SKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYH----LNRDKEAEKLVLEALYI 486 (510)
Q Consensus 423 ~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 486 (510)
.+|.. .+++++|+.+|+++.+. ....++.+||.+|.. .+++++|..+|+++.+.
T Consensus 65 ~~y~~G~g~~~d~~~A~~~~~~Aa~~----------g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 65 DFYENGKYVKKDLRKAAQYYSKACGL----------NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHHCSSSCCCHHHHHHHHHHHHHT----------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHcCCCCCccHHHHHHHHHHHHcC----------CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 99998 89999999999999872 234678999999999 99999999999999874
No 205
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.63 E-value=2e-07 Score=68.38 Aligned_cols=72 Identities=18% Similarity=0.142 Sum_probs=62.9
Q ss_pred ChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHh
Q 010446 411 HPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIA 490 (510)
Q Consensus 411 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 490 (510)
.|....++..+|.+|...|++++|+.+|++++++ .|....++..+|.+|...|++++|+..|++++++....
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVET--------DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 3556678999999999999999999999999985 45566789999999999999999999999999987653
No 206
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=98.61 E-value=3.7e-06 Score=81.16 Aligned_cols=167 Identities=12% Similarity=-0.007 Sum_probs=125.2
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCC---------hHHHHHHHHHHHHHH
Q 010446 247 SLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGK---------AVDAESVFSRILKIY 317 (510)
Q Consensus 247 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~---------~~~A~~~~~~al~~~ 317 (510)
.+..+-..+.+.|+.++|+++|+++.+. .......+|+.+-.++...+. .++|.++|++....
T Consensus 28 ~l~~~id~c~k~G~~~~A~~lf~~M~~~-------Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~- 99 (501)
T 4g26_A 28 LLKQKLDMCSKKGDVLEALRLYDEARRN-------GVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVD- 99 (501)
T ss_dssp HHHHHHHHTTTSCCHHHHHHHHHHHHHH-------TCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHc-------CCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHh-
Confidence 3555668889999999999999998764 222345677777777766554 56777777766542
Q ss_pred HHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHH
Q 010446 318 TKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLE 397 (510)
Q Consensus 318 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 397 (510)
| -.| ...+|+.+...|.+.|++++|..++++.... +-.+. ..+|..+...|.+.|+.++|.++++
T Consensus 100 ----G-~~P-d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~-------g~~Pd--~~tyn~lI~~~~~~g~~~~A~~l~~ 164 (501)
T 4g26_A 100 ----K-VVP-NEATFTNGARLAVAKDDPEMAFDMVKQMKAF-------GIQPR--LRSYGPALFGFCRKGDADKAYEVDA 164 (501)
T ss_dssp ----T-CCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT-------TCCCC--HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ----C-CCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc-------CCCCc--cceehHHHHHHHHCCCHHHHHHHHH
Confidence 1 122 3467888999999999999999999987653 22222 3467889999999999999999999
Q ss_pred HHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Q 010446 398 ECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLD 443 (510)
Q Consensus 398 ~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 443 (510)
+..+. .-.|+ ..++..+...|.+.|+.++|.++++++.+
T Consensus 165 ~M~~~------G~~Pd-~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 165 HMVES------EVVPE-EPELAALLKVSMDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp HHHHT------TCCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhc------CCCCC-HHHHHHHHHHHhhCCCHHHHHHHHHHHHH
Confidence 87642 12333 35788899999999999999999998765
No 207
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=98.61 E-value=3.3e-06 Score=81.44 Aligned_cols=167 Identities=9% Similarity=-0.004 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCC---------HHHHHHHHHHHHHHH
Q 010446 289 PLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGN---------AEEAVELYKKALRVI 359 (510)
Q Consensus 289 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~---------~~~A~~~~~~al~~~ 359 (510)
.+..+-..+.+.|+.++|+.+|+++.+. | -.| ...+|+.+-.+|...+. .++|.++|++....
T Consensus 28 ~l~~~id~c~k~G~~~~A~~lf~~M~~~-----G-v~p-d~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~- 99 (501)
T 4g26_A 28 LLKQKLDMCSKKGDVLEALRLYDEARRN-----G-VQL-SQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVD- 99 (501)
T ss_dssp HHHHHHHHTTTSCCHHHHHHHHHHHHHH-----T-CCC-CHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHc-----C-CCC-CHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHh-
Confidence 3455667889999999999999988763 1 122 23456666666665443 67888888876543
Q ss_pred HhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHH
Q 010446 360 KDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLR 439 (510)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 439 (510)
+..+. ..+|..+...|.+.|++++|..++++.... .-.|+ ..+|+.+-..|.+.|+.++|.++|+
T Consensus 100 ------G~~Pd--~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~------g~~Pd-~~tyn~lI~~~~~~g~~~~A~~l~~ 164 (501)
T 4g26_A 100 ------KVVPN--EATFTNGARLAVAKDDPEMAFDMVKQMKAF------GIQPR-LRSYGPALFGFCRKGDADKAYEVDA 164 (501)
T ss_dssp ------TCCCC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT------TCCCC-HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ------CCCCC--HHHHHHHHHHHHhcCCHHHHHHHHHHHHHc------CCCCc-cceehHHHHHHHHCCCHHHHHHHHH
Confidence 22222 236788999999999999999999886542 12333 4678889999999999999999999
Q ss_pred HHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 010446 440 ICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALY 485 (510)
Q Consensus 440 ~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 485 (510)
++.+. .-.|+ ..++..+-.+|.+.|+.++|.+++++..+
T Consensus 165 ~M~~~------G~~Pd-~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 165 HMVES------EVVPE-EPELAALLKVSMDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp HHHHT------TCCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhc------CCCCC-HHHHHHHHHHHhhCCCHHHHHHHHHHHHH
Confidence 98762 22333 35788899999999999999999998754
No 208
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.60 E-value=6.2e-07 Score=65.69 Aligned_cols=71 Identities=14% Similarity=0.211 Sum_probs=63.2
Q ss_pred hhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Q 010446 242 ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKV 320 (510)
Q Consensus 242 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 320 (510)
|....+++.+|.+|...|++++|+.++++++++ .|....++..+|.+|...|++++|+..+++++++....
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVET--------DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 455678999999999999999999999999997 45667899999999999999999999999999986543
No 209
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.59 E-value=0.00013 Score=70.27 Aligned_cols=303 Identities=9% Similarity=-0.049 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCC-hHHHHHHHHHHHHhhhhcCCC
Q 010446 120 ELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGD-LKFVQSLLDMMSGIVDSLKDD 198 (510)
Q Consensus 120 ~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~A~~~~~~~~~~~~~~~~~ 198 (510)
..++.+...+-.|+++.+..+|++++.. .| ...+|..........|+ .+.....|+.++... |.+
T Consensus 16 ~vyer~l~~~P~~~~e~~~~iferal~~----------~p-s~~LW~~Y~~f~~~~~~~~~~i~~~fe~al~~v---g~d 81 (493)
T 2uy1_A 16 AIMEHARRLYMSKDYRSLESLFGRCLKK----------SY-NLDLWMLYIEYVRKVSQKKFKLYEVYEFTLGQF---ENY 81 (493)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHSTT----------CC-CHHHHHHHHHHHHHHC----CTHHHHHHHHHHS---TTC
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHhcc----------CC-CHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHc---CCC
Confidence 3444554555558999999999999864 33 44456555555555553 345566777777654 222
Q ss_pred chHHHHHHHHHHHHHH----hhhcHHHHHHHHHHHHHHHHHhcCCCChhHHH----------------------------
Q 010446 199 EPLLDAILLHMGSMYS----TLENYEKSMLVYQRVINVLESRYGKTSILLVT---------------------------- 246 (510)
Q Consensus 199 ~~~~~~~~~~l~~~~~----~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~---------------------------- 246 (510)
+....+|......+. .+|+.+.+...|++++..- ..+......
T Consensus 82 -~~s~~iW~~Yi~f~~~~~~~~~~~~~vR~iy~rAL~~P----~~~~~~lw~~Y~~fE~~~~~~~~~~~~~~~~~~y~~a 156 (493)
T 2uy1_A 82 -WDSYGLYKEYIEEEGKIEDEQTRIEKIRNGYMRALQTP----MGSLSELWKDFENFELELNKITGKKIVGDTLPIFQSS 156 (493)
T ss_dssp -TTCHHHHHHHHHHTSSCSSHHHHHHHHHHHHHHHHTSC----CTTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred -cccHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHhCh----hhhHHHHHHHHHHHHHHhccccHHHHHHHHhHHHHHH
Confidence 222233444444432 3577888888888887620 000000000
Q ss_pred -----------------HHHHHHHHHhhcCC---------HHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHc
Q 010446 247 -----------------SLLGMAKVLGSIGR---------AKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKE 300 (510)
Q Consensus 247 -----------------~~~~la~~~~~~g~---------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~ 300 (510)
.+..... ...++ .+.....|++++.. .|.....+...+..+...
T Consensus 157 r~~y~~~~~~~~~~s~~~W~~y~~--~E~~~~~~~~~~~~~~Rv~~~ye~al~~--------~p~~~~lW~~ya~~~~~~ 226 (493)
T 2uy1_A 157 FQRYQQIQPLIRGWSVKNAARLID--LEMENGMKLGGRPHESRMHFIHNYILDS--------FYYAEEVYFFYSEYLIGI 226 (493)
T ss_dssp HHHHHHHHHHHHTCSHHHHHHHHH--HHHTCTTCCCHHHHHHHHHHHHHHHHHH--------TTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhccHHHHHHHHH--HHhcCCccCcchhhHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHc
Confidence 1111111 11121 23345566666654 234467788888899999
Q ss_pred CChHHHHHHHHHHHHHHHHHcCCCChH-------------------------------------HHHHHHHHHHHHHHCC
Q 010446 301 GKAVDAESVFSRILKIYTKVYGENDGR-------------------------------------VGMAMCSLAHAKCANG 343 (510)
Q Consensus 301 g~~~~A~~~~~~al~~~~~~~~~~~~~-------------------------------------~~~~~~~la~~~~~~g 343 (510)
|+.++|...|++|+.. . .... ....+...+......+
T Consensus 227 ~~~~~ar~i~erAi~~-P-----~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~ 300 (493)
T 2uy1_A 227 GQKEKAKKVVERGIEM-S-----DGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKR 300 (493)
T ss_dssp TCHHHHHHHHHHHHHH-C-----CSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhC-C-----CcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcC
Confidence 9999999999999875 1 1111 1122333333333455
Q ss_pred CHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHH
Q 010446 344 NAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVG-RGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLA 422 (510)
Q Consensus 344 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la 422 (510)
..+.|...|+++ .. .+. ...++...|.+....+ +.+.|..+|+.++... ++.+. .+...+
T Consensus 301 ~~~~AR~i~~~A-~~-------~~~---~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~-----~~~~~---~~~~yi 361 (493)
T 2uy1_A 301 GLELFRKLFIEL-GN-------EGV---GPHVFIYCAFIEYYATGSRATPYNIFSSGLLKH-----PDSTL---LKEEFF 361 (493)
T ss_dssp CHHHHHHHHHHH-TT-------SCC---CHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHC-----TTCHH---HHHHHH
T ss_pred CHHHHHHHHHHh-hC-------CCC---ChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHC-----CCCHH---HHHHHH
Confidence 566666666665 11 111 1123333444444444 4777777777766632 12222 233345
Q ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 010446 423 ASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIRE 488 (510)
Q Consensus 423 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 488 (510)
......|+.+.|...|+++. . ....+......-...|+.+.+...+++++....
T Consensus 362 d~e~~~~~~~~aR~l~er~~---------k---~~~lw~~~~~fE~~~G~~~~~r~v~~~~~~~~~ 415 (493)
T 2uy1_A 362 LFLLRIGDEENARALFKRLE---------K---TSRMWDSMIEYEFMVGSMELFRELVDQKMDAIK 415 (493)
T ss_dssp HHHHHHTCHHHHHHHHHHSC---------C---BHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHH---------H---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhc
Confidence 55566677777777666651 1 123344444445566888888888888877554
No 210
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=98.42 E-value=0.00015 Score=66.53 Aligned_cols=212 Identities=9% Similarity=0.002 Sum_probs=150.4
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhh-cCCHHHHHHHHHHHHHHHHHhcCCC
Q 010446 204 AILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGS-IGRAKKAVEIYHRVITILELNRGTE 282 (510)
Q Consensus 204 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 282 (510)
.+...+|..|...|++++-.+++......+... .....+.....+-..+.. -+..+.-++...++++..+..
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~---- 92 (394)
T 3txn_A 20 QGILQQGELYKQEGKAKELADLIKVTRPFLSSI---SKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQE---- 92 (394)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGS---CHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHT----
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH----
Confidence 347899999999999999888887765544322 122345555555555544 355666677788888776542
Q ss_pred CcchHH--HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 010446 283 SADLVL--PLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIK 360 (510)
Q Consensus 283 ~~~~~~--~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 360 (510)
...... .-..+|..|...|+|.+|.+.+.+.+.-+++. ++......++.....+|...+++.++..++.++.....
T Consensus 93 ~r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~--dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ 170 (394)
T 3txn_A 93 KRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKL--DDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTAN 170 (394)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS--SCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcc--ccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhc
Confidence 122222 33489999999999999999999999887664 23456778888889999999999999999999998876
Q ss_pred hhccCCCCChHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccC
Q 010446 361 DSNYMSLDDSIMENMRIDLAELLH-IVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKN 430 (510)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 430 (510)
.. .+++...+.+...-|..+. ..++|.+|..+|-++..-+... ..+....+...++.+-...++
T Consensus 171 ai---~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~~---~~~~~~~~lkYlvL~aLl~~~ 235 (394)
T 3txn_A 171 AI---YCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFDSV---DSVKALTSLKYMLLCKIMLGQ 235 (394)
T ss_dssp HS---CCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTT---CHHHHHHHHHHHHHHHHHTTC
T ss_pred cC---CCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhccccc---ccHHHHHHHHHHHHHHHHcCC
Confidence 53 3455566777777888888 8999999999999987655432 233333334444444444444
No 211
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=98.35 E-value=0.00022 Score=65.39 Aligned_cols=188 Identities=13% Similarity=0.080 Sum_probs=135.9
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHHHcCCC
Q 010446 246 TSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIK-EGKAVDAESVFSRILKIYTKVYGEN 324 (510)
Q Consensus 246 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 324 (510)
.+...+|..|...|++++-.+++......+.... ....+.....+-..+.. -+..+.-.+...++++.++..
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~---- 92 (394)
T 3txn_A 20 QGILQQGELYKQEGKAKELADLIKVTRPFLSSIS---KAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQE---- 92 (394)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSC---HHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHT----
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH----
Confidence 4577899999999999998888877655432211 12223333444444433 345566677777777776542
Q ss_pred ChHHHH--HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 325 DGRVGM--AMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 402 (510)
Q Consensus 325 ~~~~~~--~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 402 (510)
...... .-..+|.+|...|+|.+|.+.+.+..+-+++. .+......++..-..+|...+++.++..++.++...
T Consensus 93 ~r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~----dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~ 168 (394)
T 3txn_A 93 KRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKL----DDKNLLVEVQLLESKTYHALSNLPKARAALTSARTT 168 (394)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS----SCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcc----ccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 223323 34589999999999999999999999887763 346677888888999999999999999999999988
Q ss_pred HHHhhCCCChh-HHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHH
Q 010446 403 TEKYKGKEHPS-FVTHLLNLAASYS-RSKNFVEAERLLRICLDIMT 446 (510)
Q Consensus 403 ~~~~~~~~~~~-~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 446 (510)
..... .+|. .+.....-|..+. ..++|.+|..+|-++..-+.
T Consensus 169 ~~ai~--~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~ 212 (394)
T 3txn_A 169 ANAIY--CPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFD 212 (394)
T ss_dssp HHHSC--CCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHT
T ss_pred hccCC--CCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhccc
Confidence 76552 3443 3445556677788 89999999999999876543
No 212
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.34 E-value=1.9e-06 Score=62.81 Aligned_cols=87 Identities=11% Similarity=0.112 Sum_probs=67.9
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHH-HHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChh
Q 010446 377 IDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVT-HLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQS 455 (510)
Q Consensus 377 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~-~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 455 (510)
...|..+...|++++|+..+++++.. .|.... ++..+|.+|...|++++|+..|++++.+ +|.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~ 67 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQT--------EPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL--------NPD 67 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH--------CSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCC
Confidence 56889999999999999999999885 344556 8999999999999999999999999985 233
Q ss_pred hHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 010446 456 ISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 487 (510)
Q Consensus 456 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 487 (510)
...++.. +.+.+|...|+++....
T Consensus 68 ~~~~~~~--------~~~~~a~~~~~~~~~~~ 91 (99)
T 2kc7_A 68 SPALQAR--------KMVMDILNFYNKDMYNQ 91 (99)
T ss_dssp STHHHHH--------HHHHHHHHHHCCTTHHH
T ss_pred cHHHHHH--------HHHHHHHHHHHHHhccC
Confidence 3333322 55667777777776654
No 213
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.32 E-value=2e-06 Score=62.71 Aligned_cols=87 Identities=14% Similarity=0.174 Sum_probs=69.1
Q ss_pred HHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHH-HHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCch
Q 010446 122 FNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVA-ILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEP 200 (510)
Q Consensus 122 ~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 200 (510)
+..+..+...|++++|+..++++++. .|..+. ++..+|.++...|++++|+..|++++.+. ++.+
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~----------~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~----p~~~ 69 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQT----------EPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELN----PDSP 69 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH----------CSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC----TTST
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH----------CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC----CCcH
Confidence 45788889999999999999999987 677777 99999999999999999999999998875 2222
Q ss_pred HHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHH
Q 010446 201 LLDAILLHMGSMYSTLENYEKSMLVYQRVINVL 233 (510)
Q Consensus 201 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 233 (510)
.. +.. +.+.++...|+++....
T Consensus 70 ~~---~~~--------~~~~~a~~~~~~~~~~~ 91 (99)
T 2kc7_A 70 AL---QAR--------KMVMDILNFYNKDMYNQ 91 (99)
T ss_dssp HH---HHH--------HHHHHHHHHHCCTTHHH
T ss_pred HH---HHH--------HHHHHHHHHHHHHhccC
Confidence 22 211 67777888887776654
No 214
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.30 E-value=0.00015 Score=69.88 Aligned_cols=284 Identities=12% Similarity=0.036 Sum_probs=159.2
Q ss_pred HcC-ChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHH
Q 010446 130 MMG-NKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLH 208 (510)
Q Consensus 130 ~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (510)
..| ++..|...|++++... |. |+++.+..+|++++... + +.. +|..
T Consensus 6 ~~~~~i~~aR~vyer~l~~~----------P~---------------~~~e~~~~iferal~~~----p-s~~---LW~~ 52 (493)
T 2uy1_A 6 KMGVELSSPSAIMEHARRLY----------MS---------------KDYRSLESLFGRCLKKS----Y-NLD---LWML 52 (493)
T ss_dssp ------CCHHHHHHHHHHHH----------HT---------------TCHHHHHHHHHHHSTTC----C-CHH---HHHH
T ss_pred HcCcchHHHHHHHHHHHHHC----------CC---------------CCHHHHHHHHHHHhccC----C-CHH---HHHH
Confidence 456 4888999999988762 21 88999999999998743 1 222 2333
Q ss_pred HHHHHHhhh-cHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHh----hcCCHHHHHHHHHHHHHHHHHhcCCCC
Q 010446 209 MGSMYSTLE-NYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLG----SIGRAKKAVEIYHRVITILELNRGTES 283 (510)
Q Consensus 209 l~~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~----~~g~~~~A~~~~~~al~~~~~~~~~~~ 283 (510)
........+ ..+.....|+.++... |. ++.....+......+. ..|+.+.+...|++++..- ..+.
T Consensus 53 Y~~f~~~~~~~~~~i~~~fe~al~~v----g~-d~~s~~iW~~Yi~f~~~~~~~~~~~~~vR~iy~rAL~~P----~~~~ 123 (493)
T 2uy1_A 53 YIEYVRKVSQKKFKLYEVYEFTLGQF----EN-YWDSYGLYKEYIEEEGKIEDEQTRIEKIRNGYMRALQTP----MGSL 123 (493)
T ss_dssp HHHHHHHHC----CTHHHHHHHHHHS----TT-CTTCHHHHHHHHHHTSSCSSHHHHHHHHHHHHHHHHTSC----CTTH
T ss_pred HHHHHHHhCchHHHHHHHHHHHHHHc----CC-CcccHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHhCh----hhhH
Confidence 333333333 2344566677776642 21 2222344444444433 2456777888888886520 0000
Q ss_pred cchHH---------------------------------------------HHHHHHHHHHHcCC---------hHHHHHH
Q 010446 284 ADLVL---------------------------------------------PLFSLGSLFIKEGK---------AVDAESV 309 (510)
Q Consensus 284 ~~~~~---------------------------------------------~~~~la~~~~~~g~---------~~~A~~~ 309 (510)
..... .+.. .+-...++ .+.....
T Consensus 124 ~~lw~~Y~~fE~~~~~~~~~~~~~~~~~~y~~ar~~y~~~~~~~~~~s~~~W~~--y~~~E~~~~~~~~~~~~~~Rv~~~ 201 (493)
T 2uy1_A 124 SELWKDFENFELELNKITGKKIVGDTLPIFQSSFQRYQQIQPLIRGWSVKNAAR--LIDLEMENGMKLGGRPHESRMHFI 201 (493)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSHHHHHH--HHHHHHTCTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHhHHHHHHHHHHHHHHHHHhhccHHHHHH--HHHHHhcCCccCcchhhHHHHHHH
Confidence 00000 1111 11111121 1223445
Q ss_pred HHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc--------CC---------------
Q 010446 310 FSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNY--------MS--------------- 366 (510)
Q Consensus 310 ~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~--------~~--------------- 366 (510)
|++++... |.....+...+..+...|+.++|...|++++.. ..... ..
T Consensus 202 ye~al~~~--------p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~ 272 (493)
T 2uy1_A 202 HNYILDSF--------YYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMG 272 (493)
T ss_dssp HHHHHHHT--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC--
T ss_pred HHHHHHcC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhh
Confidence 55555431 233567788888899999999999999999976 32100 00
Q ss_pred -------CCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhcc-CHHHHHHHH
Q 010446 367 -------LDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSK-NFVEAERLL 438 (510)
Q Consensus 367 -------~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~ 438 (510)
..+.....++...+....+.++.+.|...|+++ . . +. ....++...|.+....+ +.+.|...|
T Consensus 273 ~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~----~--~~--~~~~v~i~~A~lE~~~~~d~~~ar~if 343 (493)
T 2uy1_A 273 EAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-G----N--EG--VGPHVFIYCAFIEYYATGSRATPYNIF 343 (493)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-T----T--SC--CCHHHHHHHHHHHHHHHCCSHHHHHHH
T ss_pred ccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-h----C--CC--CChHHHHHHHHHHHHHCCChHHHHHHH
Confidence 000111234455555566677788888888887 2 1 11 12345555566666556 699999999
Q ss_pred HHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 010446 439 RICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEA 483 (510)
Q Consensus 439 ~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 483 (510)
+.+++.. ++.|.. +...+......|+.+.|...|+++
T Consensus 344 e~al~~~-----~~~~~~---~~~yid~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 344 SSGLLKH-----PDSTLL---KEEFFLFLLRIGDEENARALFKRL 380 (493)
T ss_dssp HHHHHHC-----TTCHHH---HHHHHHHHHHHTCHHHHHHHHHHS
T ss_pred HHHHHHC-----CCCHHH---HHHHHHHHHHcCCHHHHHHHHHHH
Confidence 9999842 334433 444566777889999998887764
No 215
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.23 E-value=2.1e-05 Score=57.73 Aligned_cols=80 Identities=15% Similarity=0.144 Sum_probs=65.1
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcc
Q 010446 206 LLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESAD 285 (510)
Q Consensus 206 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 285 (510)
.+.+|..++..|+|..|+.+|++|++....... .......++..+|.++..+|++++|+.++++++++ .|.
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l--------~P~ 78 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL--------DPE 78 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc--------CCC
Confidence 678999999999999999999999988654211 12356788999999999999999999999999987 444
Q ss_pred hHHHHHHHH
Q 010446 286 LVLPLFSLG 294 (510)
Q Consensus 286 ~~~~~~~la 294 (510)
...+..+++
T Consensus 79 ~~~~~~n~~ 87 (104)
T 2v5f_A 79 HQRANGNLK 87 (104)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHhhHH
Confidence 455566655
No 216
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.18 E-value=5.1e-05 Score=55.65 Aligned_cols=71 Identities=7% Similarity=-0.038 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHH
Q 010446 162 VAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINV 232 (510)
Q Consensus 162 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 232 (510)
+.-.+.+|..++..|+|..|+.+++.++...............++..+|.++..+|++++|+.++++++.+
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 34567899999999999999999999998764422223455677899999999999999999999999986
No 217
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.15 E-value=5.1e-05 Score=68.36 Aligned_cols=134 Identities=14% Similarity=0.045 Sum_probs=94.2
Q ss_pred HHHHHHHHHHcCC---hhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh---C-ChHHHHHHHHHHHHhhh
Q 010446 121 LFNEVKSMIMMGN---KNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYI---G-DLKFVQSLLDMMSGIVD 193 (510)
Q Consensus 121 l~~~~~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---g-~~~~A~~~~~~~~~~~~ 193 (510)
++-++..+...++ ..+|+.+|++++++ +|+.+.++..++.+|... + ........+..+.....
T Consensus 199 l~Lra~~~l~~~~~~~~~~A~~l~e~Al~l----------DP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~ 268 (372)
T 3ly7_A 199 NFYQAHDYLLHGDDKSLNRASELLGEIVQS----------SPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIV 268 (372)
T ss_dssp HHHHHHHHHHHCSHHHHHHHHHHHHHHHHH----------CTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHh----------CCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHH
Confidence 4445655555444 58899999999998 888888888777777531 1 11122222233332221
Q ss_pred hcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 010446 194 SLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVIT 273 (510)
Q Consensus 194 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 273 (510)
. ....|..+.++..++..+...|++++|+..+++++.+. +. ..++..+|.++...|++++|++.|.+|+.
T Consensus 269 a-~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln--------~s-~~a~~llG~~~~~~G~~~eA~e~~~~Alr 338 (372)
T 3ly7_A 269 T-LPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE--------MS-WLNYVLLGKVYEMKGMNREAADAYLTAFN 338 (372)
T ss_dssp T-CGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--------CC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred h-cccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC--------CC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 1 12224445557788888888899999999999999972 22 45678899999999999999999999999
Q ss_pred H
Q 010446 274 I 274 (510)
Q Consensus 274 ~ 274 (510)
+
T Consensus 339 L 339 (372)
T 3ly7_A 339 L 339 (372)
T ss_dssp H
T ss_pred c
Confidence 8
No 218
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.15 E-value=0.00034 Score=60.34 Aligned_cols=101 Identities=16% Similarity=0.091 Sum_probs=77.3
Q ss_pred hhHHHHHHHHHHHHhh-----cC------CHHHHHHHHHHHHHHHHHhcCCCCcc--hHHHHHHHHHHHHHc-----CCh
Q 010446 242 ILLVTSLLGMAKVLGS-----IG------RAKKAVEIYHRVITILELNRGTESAD--LVLPLFSLGSLFIKE-----GKA 303 (510)
Q Consensus 242 ~~~~~~~~~la~~~~~-----~g------~~~~A~~~~~~al~~~~~~~~~~~~~--~~~~~~~la~~~~~~-----g~~ 303 (510)
+..+..++..|.+... .| ...+|...+++++++ +|. ...++..+|.+|... |+.
T Consensus 149 ~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleL--------DP~~~~GsA~~~LG~lY~~vPp~~gGd~ 220 (301)
T 3u64_A 149 RVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDL--------WPSYQEGAVWNVLTKFYAAAPESFGGGM 220 (301)
T ss_dssp GGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHH--------CTTHHHHHHHHHHHHHHHHSCTTTTCCH
T ss_pred ccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHh--------CCCcccCHHHHHHHHHHHhCCCccCCCH
Confidence 3445555555555432 23 356788888899888 444 567999999999995 999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHH
Q 010446 304 VDAESVFSRILKIYTKVYGENDGR-VGMAMCSLAHAKCA-NGNAEEAVELYKKALRV 358 (510)
Q Consensus 304 ~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 358 (510)
++|..+|++|+++. |. ...++...|..+.. .|++++|..++++++..
T Consensus 221 ekA~~~ferAL~Ln--------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a 269 (301)
T 3u64_A 221 EKAHTAFEHLTRYC--------SAHDPDHHITYADALCIPLNNRAGFDEALDRALAI 269 (301)
T ss_dssp HHHHHHHHHHHHHC--------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhC--------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcC
Confidence 99999999999972 32 24667778888887 59999999999999987
No 219
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.05 E-value=0.00019 Score=64.74 Aligned_cols=137 Identities=15% Similarity=0.100 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHhhCC---hHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhc----HHHHHHHHHHHHHHHH
Q 010446 162 VAILDIIALGYVYIGD---LKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLEN----YEKSMLVYQRVINVLE 234 (510)
Q Consensus 162 ~~~~~~l~~~~~~~g~---~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~----~~~A~~~~~~al~~~~ 234 (510)
+.-++..|..+...++ ..+|+.+|++++++. |..+.++-.++.+|..... ......-..+++....
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lD-------P~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~ 268 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSS-------PEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIV 268 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHH
Confidence 3344555666665554 478999999999875 5555555555555542211 1122222333433221
Q ss_pred HhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 010446 235 SRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRIL 314 (510)
Q Consensus 235 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 314 (510)
. ....+..+.++..++..+...|++++|+..+++|+.+ + +. ...+..+|.++...|++++|++.|.+|+
T Consensus 269 a--~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~L-------n-~s-~~a~~llG~~~~~~G~~~eA~e~~~~Al 337 (372)
T 3ly7_A 269 T--LPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDL-------E-MS-WLNYVLLGKVYEMKGMNREAADAYLTAF 337 (372)
T ss_dssp T--CGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-------C-CC-HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred h--cccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhc-------C-CC-HHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 1 1223455677888888888899999999999999998 2 32 5677889999999999999999999999
Q ss_pred HH
Q 010446 315 KI 316 (510)
Q Consensus 315 ~~ 316 (510)
.+
T Consensus 338 rL 339 (372)
T 3ly7_A 338 NL 339 (372)
T ss_dssp HH
T ss_pred hc
Confidence 86
No 220
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.96 E-value=0.00027 Score=55.05 Aligned_cols=108 Identities=11% Similarity=0.074 Sum_probs=82.7
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCc-
Q 010446 121 LFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDE- 199 (510)
Q Consensus 121 l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~- 199 (510)
+++.++.++..|.|+.|+-+...++.+..... ..........++..+|..++..|+|..|...|++++...+.+....
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~-~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNP-ELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCc-ccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 67788899999999999999999888744310 0112345678899999999999999999999999988776532221
Q ss_pred -----------------hHHHHHHHHHHHHHHhhhcHHHHHHHHHHH
Q 010446 200 -----------------PLLDAILLHMGSMYSTLENYEKSMLVYQRV 229 (510)
Q Consensus 200 -----------------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 229 (510)
+.-.++.+.++.||...|++++|+..++..
T Consensus 102 ~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I 148 (167)
T 3ffl_A 102 VRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI 148 (167)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS
T ss_pred ccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 112356789999999999999999987653
No 221
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.95 E-value=0.0033 Score=54.26 Aligned_cols=85 Identities=11% Similarity=0.105 Sum_probs=70.9
Q ss_pred cHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhc-----CCHHHHHHHHHHHHHHHHHhcCCCCcc-hHHHHH
Q 010446 218 NYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSI-----GRAKKAVEIYHRVITILELNRGTESAD-LVLPLF 291 (510)
Q Consensus 218 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~-----g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~ 291 (510)
....|...+++++++. .......++..+|.+|... |+.++|..+|++++++ +|. ...+++
T Consensus 178 ~l~~A~a~lerAleLD------P~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~L--------nP~~~id~~v 243 (301)
T 3u64_A 178 TVHAAVMMLERACDLW------PSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRY--------CSAHDPDHHI 243 (301)
T ss_dssp HHHHHHHHHHHHHHHC------TTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHH--------CCTTCSHHHH
T ss_pred hHHHHHHHHHHHHHhC------CCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHh--------CCCCCchHHH
Confidence 4578888888888872 1223567899999999995 9999999999999999 454 378888
Q ss_pred HHHHHHHH-cCChHHHHHHHHHHHHH
Q 010446 292 SLGSLFIK-EGKAVDAESVFSRILKI 316 (510)
Q Consensus 292 ~la~~~~~-~g~~~~A~~~~~~al~~ 316 (510)
..|..+.. .|++++|..++++++..
T Consensus 244 ~YA~~l~~~~gd~~~a~~~L~kAL~a 269 (301)
T 3u64_A 244 TYADALCIPLNNRAGFDEALDRALAI 269 (301)
T ss_dssp HHHHHTTTTTTCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHcC
Confidence 99999988 59999999999999984
No 222
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.95 E-value=0.00033 Score=54.52 Aligned_cols=128 Identities=15% Similarity=0.035 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCC
Q 010446 330 MAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGK 409 (510)
Q Consensus 330 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 409 (510)
.++..-...+...|.|+.|+-....++.+..... ..-.+.....++..+|++++..|+|..|...|++++...+.....
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~-~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~ 99 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNP-ELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKT 99 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCc-ccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 3455566678889999999999999988875420 011244566788999999999999999999999999887643211
Q ss_pred -----------------CChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHH
Q 010446 410 -----------------EHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITL 467 (510)
Q Consensus 410 -----------------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 467 (510)
+.+...++.+.++.||.+.|++++|+..++.. |.......+...||.+|
T Consensus 100 ~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I---------p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 100 SKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI---------PSRQRTPKINMLLANLY 165 (167)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS---------CGGGCCHHHHHHHHHHC
T ss_pred CCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC---------CchhcCHHHHHHHHHHh
Confidence 11223467889999999999999999987643 22233344556666654
No 223
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.91 E-value=0.00014 Score=51.85 Aligned_cols=67 Identities=13% Similarity=0.100 Sum_probs=58.3
Q ss_pred cchHHHHHHHHHHHHHcCC---hHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 284 ADLVLPLFSLGSLFIKEGK---AVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 284 ~~~~~~~~~la~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
|.....+..+|.++...++ .++|...+++++++ +|....++..+|..++..|+|++|+.+++++++.
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~--------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQL--------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH--------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4557788889999876666 79999999999996 5677788999999999999999999999999876
No 224
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.87 E-value=0.011 Score=55.83 Aligned_cols=231 Identities=13% Similarity=0.040 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhc
Q 010446 116 RQLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSL 195 (510)
Q Consensus 116 ~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 195 (510)
..++..+..+..+. .|+++.|++.+-..- +......+.+....++..+...+...|+++...+++.......
T Consensus 15 ~~~~~~~~~~~~l~-~~~~~~a~e~ll~lE----K~~r~~~d~~s~~r~l~~iv~l~~~~~~~~~l~e~i~~Lskkr--- 86 (445)
T 4b4t_P 15 QILKEEFPKIDSLA-QNDCNSALDQLLVLE----KKTRQASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLLSKKH--- 86 (445)
T ss_dssp -------------C-HHHHHHHHHHHHHHH----HHHSSSCSTTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTT---
T ss_pred HHHHHHHHHHHHHH-cCCHHHHHHHHHHHH----HHhhhccchhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHh---
Confidence 34444444454443 367788877543222 2222244556667778888889999999998877665433321
Q ss_pred CCCchHHHHHHHHHHHHHH-hhhcHHHHHHHHHHHHHHHHHhcCCC---ChhHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 010446 196 KDDEPLLDAILLHMGSMYS-TLENYEKSMLVYQRVINVLESRYGKT---SILLVTSLLGMAKVLGSIGRAKKAVEIYHRV 271 (510)
Q Consensus 196 ~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~---~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 271 (510)
+........ ......-|. .....+. ......+.......... ....+.....++.+|...|++.+|...+...
T Consensus 87 ~qlk~ai~~-~V~~~~~~l~~~~~~d~--~~~~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l 163 (445)
T 4b4t_P 87 GQLKLSIQY-MIQKVMEYLKSSKSLDL--NTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCEL 163 (445)
T ss_dssp TTSHHHHHH-HHHHHHHHHHHHCTTHH--HHHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hhhHHHHHH-HHHHHHHHHhcCCchhH--HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 222122222 222221122 1121111 11112222111111111 1135677788999999999999999999887
Q ss_pred HHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHCCCHHHHHH
Q 010446 272 ITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGR-VGMAMCSLAHAKCANGNAEEAVE 350 (510)
Q Consensus 272 l~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~ 350 (510)
..-... ..+.......+.....+|...+++.+|...+.++....... ..+|. ....+...|.++...++|.+|..
T Consensus 164 ~~Et~~--~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~--~~~~~lk~~~~~~~~~~~~~e~~y~~a~~ 239 (445)
T 4b4t_P 164 QVETYG--SMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKN--PKYESLKLEYYNLLVKISLHKREYLEVAQ 239 (445)
T ss_dssp HHHHCS--SSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHh--cccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhccc--CCcHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 533211 12334556778888999999999999999999986544332 23343 45667778999999999999999
Q ss_pred HHHHHHHHHHh
Q 010446 351 LYKKALRVIKD 361 (510)
Q Consensus 351 ~~~~al~~~~~ 361 (510)
+|..+......
T Consensus 240 ~y~e~~~~~~~ 250 (445)
T 4b4t_P 240 YLQEIYQTDAI 250 (445)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhcccc
Confidence 99999887654
No 225
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.83 E-value=0.0011 Score=51.40 Aligned_cols=68 Identities=10% Similarity=0.050 Sum_probs=58.9
Q ss_pred cchHHHHHHHHHHHHHcC---ChHHHHHHHHHHHHHHHHHcCCCCh-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 284 ADLVLPLFSLGSLFIKEG---KAVDAESVFSRILKIYTKVYGENDG-RVGMAMCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 284 ~~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
+....+.+++|+++.+.+ +.++++.++++.++. +.| ....+++++|..+.+.|+|++|..++++++++
T Consensus 29 ~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~-------~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~i 100 (152)
T 1pc2_A 29 SVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPK-------GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 100 (152)
T ss_dssp CCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH-------SCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-------CCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 356788999999999988 666999999988874 235 56788999999999999999999999999998
No 226
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.81 E-value=0.00018 Score=51.19 Aligned_cols=66 Identities=11% Similarity=0.061 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHhhcCC---HHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 243 LLVTSLLGMAKVLGSIGR---AKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKI 316 (510)
Q Consensus 243 ~~~~~~~~la~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 316 (510)
.....+..+|.+++..++ .++|..++++++++ +|....++..+|..+...|+|++|+.+++++++.
T Consensus 4 ~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~--------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 4 VTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQL--------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH--------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 345677888888876665 79999999999998 6778899999999999999999999999999874
No 227
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.77 E-value=0.001 Score=51.45 Aligned_cols=84 Identities=12% Similarity=0.012 Sum_probs=65.9
Q ss_pred cHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcC---CHHHHHHHHHHHHHHHHHhcCCCCc-chHHHHHHH
Q 010446 218 NYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIG---RAKKAVEIYHRVITILELNRGTESA-DLVLPLFSL 293 (510)
Q Consensus 218 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~~~l 293 (510)
....+.+.|.+.++. .+....+.+++|.++...+ +.++++.+++..++. +.| ....+++++
T Consensus 13 ~l~~~~~~y~~e~~~--------~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~-------~~p~~~rd~lY~L 77 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAA--------GSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPK-------GSKEEQRDYVFYL 77 (152)
T ss_dssp HHHHHHHHHHHHHHT--------TCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH-------SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcc--------CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-------CCccchHHHHHHH
Confidence 344555555555431 1245678899999999988 667999999998886 224 567899999
Q ss_pred HHHHHHcCChHHHHHHHHHHHHH
Q 010446 294 GSLFIKEGKAVDAESVFSRILKI 316 (510)
Q Consensus 294 a~~~~~~g~~~~A~~~~~~al~~ 316 (510)
|..+.+.|+|++|.+++++++++
T Consensus 78 Av~~~kl~~Y~~A~~y~~~lL~i 100 (152)
T 1pc2_A 78 AVGNYRLKEYEKALKYVRGLLQT 100 (152)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHhc
Confidence 99999999999999999999996
No 228
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.55 E-value=0.034 Score=52.47 Aligned_cols=218 Identities=12% Similarity=0.051 Sum_probs=133.2
Q ss_pred hCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 010446 175 IGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKV 254 (510)
Q Consensus 175 ~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~ 254 (510)
.|+++.|++.+....+..+. +.+.+....++..+..++...|+++...+++.-... ..+. .+...........-
T Consensus 29 ~~~~~~a~e~ll~lEK~~r~-~~d~~s~~r~l~~iv~l~~~~~~~~~l~e~i~~Lsk----kr~q-lk~ai~~~V~~~~~ 102 (445)
T 4b4t_P 29 QNDCNSALDQLLVLEKKTRQ-ASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLLSK----KHGQ-LKLSIQYMIQKVME 102 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHSS-SCSTTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHT----TTTT-SHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhhh-ccchhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHH----Hhhh-hHHHHHHHHHHHHH
Confidence 46788888777555544433 444455566678888899999999887665542211 1111 11111111111111
Q ss_pred Hh-hcCCHHHHHHHHHHHHHHHHHhcCCC-C--cchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCC-hHHH
Q 010446 255 LG-SIGRAKKAVEIYHRVITILELNRGTE-S--ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEND-GRVG 329 (510)
Q Consensus 255 ~~-~~g~~~~A~~~~~~al~~~~~~~~~~-~--~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~ 329 (510)
|. .....+. ......++......... . ...+.....|+.+|...|++.+|...+..... +.++..+ ....
T Consensus 103 ~l~~~~~~d~--~~~~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~---Et~~~~~~~~kv 177 (445)
T 4b4t_P 103 YLKSSKSLDL--NTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQV---ETYGSMEMSEKI 177 (445)
T ss_dssp HHHHHCTTHH--HHHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH---HHCSSSCHHHHH
T ss_pred HHhcCCchhH--HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH---HHHhcccHHHHH
Confidence 21 1222111 11112222111111100 1 12445667899999999999999999987753 2233332 3356
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHh
Q 010446 330 MAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKY 406 (510)
Q Consensus 330 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 406 (510)
..+.....+|...+++..|...++++....... .+.+......+...|.++...++|.+|-.+|.++.......
T Consensus 178 e~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~---~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~~~ 251 (445)
T 4b4t_P 178 QFILEQMELSILKGDYSQATVLSRKILKKTFKN---PKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAIK 251 (445)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhccc---CCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhccccc
Confidence 778888999999999999999999986544432 34445566777889999999999999999999988765443
No 229
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.15 E-value=0.011 Score=45.04 Aligned_cols=103 Identities=11% Similarity=0.013 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHcCCh------HHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Q 010446 375 MRIDLAELLHIVGRG------QEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKT 448 (510)
Q Consensus 375 ~~~~la~~~~~~g~~------~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 448 (510)
.+........+.|+. ++-++.|++|+..............+..+...|.. ...++.++|.+.|+.++.+
T Consensus 15 ~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~---- 89 (161)
T 4h7y_A 15 DWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARAN---- 89 (161)
T ss_dssp HHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHH----
T ss_pred HHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHH----
Confidence 334555666666887 77778888887765332222345566677777755 6779999999999999985
Q ss_pred hCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 010446 449 VGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYI 486 (510)
Q Consensus 449 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 486 (510)
|...+.++...|..-.++|+...|.+.+.+++.+
T Consensus 90 ----hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~ 123 (161)
T 4h7y_A 90 ----CKKFAFVHISFAQFELSQGNVKKSKQLLQKAVER 123 (161)
T ss_dssp ----CTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred ----hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhcc
Confidence 3445888999999999999999999999999873
No 230
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.79 E-value=0.087 Score=39.10 Aligned_cols=67 Identities=10% Similarity=0.042 Sum_probs=53.6
Q ss_pred chHHHHHHHHHHHHHcCChHH---HHHHHHHHHHHHHHHcCCCCh-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 285 DLVLPLFSLGSLFIKEGKAVD---AESVFSRILKIYTKVYGENDG-RVGMAMCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 285 ~~~~~~~~la~~~~~~g~~~~---A~~~~~~al~~~~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
....+.+++|+++....+... ++.+++.. +..+.| ..-..++.+|..+.+.|+|++|..+++..+++
T Consensus 33 ~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l-------~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~ 103 (126)
T 1nzn_A 33 VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEEL-------LPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 103 (126)
T ss_dssp CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHH-------TTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-------HhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 456888999999999887765 55555444 333435 57788999999999999999999999999998
No 231
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.75 E-value=0.03 Score=42.65 Aligned_cols=104 Identities=16% Similarity=0.168 Sum_probs=75.9
Q ss_pred HHHHHHHHHHhhcCCH------HHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 010446 246 TSLLGMAKVLGSIGRA------KKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTK 319 (510)
Q Consensus 246 ~~~~~la~~~~~~g~~------~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 319 (510)
+.+..........|+. ++-++.|++|+..............+..+...|.. ...++.++|...|+.++.+
T Consensus 14 d~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~--- 89 (161)
T 4h7y_A 14 EDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARAN--- 89 (161)
T ss_dssp HHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHH---
Confidence 4445555555666887 77788888888764322222334445566666654 5669999999999999986
Q ss_pred HcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 320 VYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 320 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
+...+.++...|..-.++|+...|...+.+++..
T Consensus 90 -----hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~ 123 (161)
T 4h7y_A 90 -----CKKFAFVHISFAQFELSQGNVKKSKQLLQKAVER 123 (161)
T ss_dssp -----CTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred -----hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhcc
Confidence 2223788888899999999999999999999986
No 232
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.40 E-value=0.065 Score=50.39 Aligned_cols=110 Identities=15% Similarity=0.092 Sum_probs=88.7
Q ss_pred cchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhc
Q 010446 284 ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSN 363 (510)
Q Consensus 284 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 363 (510)
.....++..+|..|...|++++|.+.|.++...+. ........+..+..++...+++..+..++.++......
T Consensus 128 ~e~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~-----~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~-- 200 (429)
T 4b4t_R 128 LEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAI-----STGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEK-- 200 (429)
T ss_dssp CCCSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHT-----CCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcC-----ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhc--
Confidence 34566788999999999999999999999877542 23345677888889999999999999999999887654
Q ss_pred cCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 364 YMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 402 (510)
Q Consensus 364 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 402 (510)
++++..........|.++...++|.+|-.+|-++...
T Consensus 201 --~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 201 --GGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp --CCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 4556666666677788888999999999999877654
No 233
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=96.36 E-value=0.044 Score=56.12 Aligned_cols=105 Identities=9% Similarity=-0.084 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcC
Q 010446 201 LLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRG 280 (510)
Q Consensus 201 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 280 (510)
.....++.+-..|++.|+.++|..++.+..+...+...+ ...+|+.+...|.+.|+.++|.++++++.+.
T Consensus 125 ~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P----dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~------ 194 (1134)
T 3spa_A 125 GQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL----TLDMYNAVMLGWARQGAFKELVYVLFMVKDA------ 194 (1134)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC----CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT------
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC----CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHc------
Confidence 344458899999999999999999998876543332222 2568999999999999999999999998654
Q ss_pred CCCcchHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHH
Q 010446 281 TESADLVLPLFSLGSLFIKEGKA-VDAESVFSRILKI 316 (510)
Q Consensus 281 ~~~~~~~~~~~~la~~~~~~g~~-~~A~~~~~~al~~ 316 (510)
.......+|+.+-.++.+.|+. ++|.+++++..+.
T Consensus 195 -G~~PDvvTYntLI~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 195 -GLTPDLLSYAAALQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp -TCCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred -CCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 2333467888888899999985 7888999887653
No 234
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.28 E-value=0.22 Score=36.97 Aligned_cols=69 Identities=13% Similarity=0.009 Sum_probs=54.5
Q ss_pred ChhHHHHHHHHHHHHHhhCChHH---HHHHHHHHHHhhhhcCCCch-HHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHH
Q 010446 158 GIEEVAILDIIALGYVYIGDLKF---VQSLLDMMSGIVDSLKDDEP-LLDAILLHMGSMYSTLENYEKSMLVYQRVINV 232 (510)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~g~~~~---A~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 232 (510)
.+....+.+.+|+++....+... ++.+++.... .+.| ....+++.+|..+++.|+|++|..+++..+++
T Consensus 31 ~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~------~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~ 103 (126)
T 1nzn_A 31 GSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLP------KGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 103 (126)
T ss_dssp SCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTT------TSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh------cCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 34566788999999999887776 6666665443 2224 56778999999999999999999999999987
No 235
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=96.27 E-value=0.056 Score=55.40 Aligned_cols=106 Identities=10% Similarity=-0.009 Sum_probs=81.8
Q ss_pred ChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Q 010446 369 DSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKT 448 (510)
Q Consensus 369 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 448 (510)
......+++.+...|.+.|+.++|..++.+......+- -.|+ ..+|+.|...|.+.|+.++|.++|+++.+.
T Consensus 123 ~~~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG---~~Pd-vvTYNtLI~Glck~G~~~eA~~Lf~eM~~~---- 194 (1134)
T 3spa_A 123 LSGQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKR---KLLT-LDMYNAVMLGWARQGAFKELVYVLFMVKDA---- 194 (1134)
T ss_dssp CCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHH---TTCC-HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT----
T ss_pred HHhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcC---CCCC-HhHHHHHHHHHHhCCCHHHHHHHHHHHHHc----
Confidence 34445678999999999999999999998765443322 1233 368999999999999999999999998762
Q ss_pred hCCCChhhHHHHHHHHHHHHhcCCh-HHHHHHHHHHHH
Q 010446 449 VGPDDQSISFPMLHLGITLYHLNRD-KEAEKLVLEALY 485 (510)
Q Consensus 449 ~~~~~~~~~~~~~~la~~~~~~g~~-~~A~~~~~~al~ 485 (510)
.-.|+. .+|..+-.++.+.|+. ++|.+++++..+
T Consensus 195 --G~~PDv-vTYntLI~glcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 195 --GLTPDL-LSYAAALQCMGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp --TCCCCH-HHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred --CCCCcH-HHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 233444 5688888889999985 788899988765
No 236
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.20 E-value=0.12 Score=53.27 Aligned_cols=75 Identities=12% Similarity=0.110 Sum_probs=51.1
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcch
Q 010446 207 LHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADL 286 (510)
Q Consensus 207 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 286 (510)
..+...+...|.+++|+...+.... ........|++++|.+..+. ...
T Consensus 633 ~~~~~~l~~~~~~~~a~~~~~~~~~-------------------~f~~~l~~~~~~~A~~~~~~-------------~~~ 680 (814)
T 3mkq_A 633 TKIARFLEGQEYYEEALNISPDQDQ-------------------KFELALKVGQLTLARDLLTD-------------ESA 680 (814)
T ss_dssp HHHHHHHHHTTCHHHHHHHCCCHHH-------------------HHHHHHHHTCHHHHHHHHTT-------------CCC
T ss_pred HHHHHHHHhCCChHHheecCCCcch-------------------heehhhhcCCHHHHHHHHHh-------------hCc
Confidence 4555667778888887765432110 12234568888888876432 122
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHH
Q 010446 287 VLPLFSLGSLFIKEGKAVDAESVFSRI 313 (510)
Q Consensus 287 ~~~~~~la~~~~~~g~~~~A~~~~~~a 313 (510)
...+..+|..+...|+++.|+..|.++
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 467888999999999999999999876
No 237
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.00 E-value=0.24 Score=51.03 Aligned_cols=46 Identities=13% Similarity=0.226 Sum_probs=28.6
Q ss_pred HHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHH
Q 010446 172 YVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRV 229 (510)
Q Consensus 172 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 229 (510)
....|++++|.+..+. .+.+ ..|..+|..+...|+++.|+.+|.++
T Consensus 662 ~l~~~~~~~A~~~~~~---------~~~~---~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 662 ALKVGQLTLARDLLTD---------ESAE---MKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHTCHHHHHHHHTT---------CCCH---HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhcCCHHHHHHHHHh---------hCcH---hHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 3456666666655422 1112 23677777777888888888777765
No 238
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.99 E-value=0.069 Score=50.20 Aligned_cols=104 Identities=13% Similarity=0.146 Sum_probs=83.3
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCch
Q 010446 121 LFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEP 200 (510)
Q Consensus 121 l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 200 (510)
....|..+...|++++|.+.|.++.+.. .........+..+..++...+|+..+..++.++...... +++..
T Consensus 134 ~~~la~~~~~~Gd~~~A~~~~~~~~~~~-------~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~-~~d~~ 205 (429)
T 4b4t_R 134 WINLGEYYAQIGDKDNAEKTLGKSLSKA-------ISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEK-GGDWE 205 (429)
T ss_dssp CHHHHHHHHHHCCCTTHHHHHHHHHHHH-------TCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-CCCTH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhc-------CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhc-CCCHH
Confidence 5568899999999999999999987652 234567788888899999999999999999999887765 33333
Q ss_pred HHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHH
Q 010446 201 LLDAILLHMGSMYSTLENYEKSMLVYQRVINV 232 (510)
Q Consensus 201 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 232 (510)
.........|.++...++|.+|..+|..+...
T Consensus 206 ~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 206 RRNRYKTYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 44455566788888999999999999887654
No 239
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=95.91 E-value=0.86 Score=40.45 Aligned_cols=157 Identities=15% Similarity=0.124 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHH-------H-HHHHHHHcCCCChHHHHHHHHH-
Q 010446 265 VEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSR-------I-LKIYTKVYGENDGRVGMAMCSL- 335 (510)
Q Consensus 265 ~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~-------a-l~~~~~~~~~~~~~~~~~~~~l- 335 (510)
..+.++++....+. +.........+..+|..|+..+++.+|..+|-- . .++.-+......+.....+...
T Consensus 115 ~~fi~~ai~WS~~~-g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~e~dlfiaRa 193 (336)
T 3lpz_A 115 KRFVKEMIDWSKKF-GDYPAGDPELHHVVGTLYVEEGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDESHTAPLYCARA 193 (336)
T ss_dssp HHHHHHHHHHHHHH-SSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhhc-CCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCccHHHHHHHH
Confidence 34667777776653 222334456778899999999999999888631 1 1111111111223333333333
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHhhcc-C--------------CCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 010446 336 AHAKCANGNAEEAVELYKKALRVIKDSNY-M--------------SLDDSIMENMRIDLAELLHIVGRGQEGRELLEECL 400 (510)
Q Consensus 336 a~~~~~~g~~~~A~~~~~~al~~~~~~~~-~--------------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 400 (510)
...|...++...|...+..-.+...+... + -+..|.+-.+ .+...-+..+. ...|....
T Consensus 194 VL~yL~l~n~~~A~~~~~~f~~~l~~~~p~L~~q~~~~~~~~~~~~p~~PLLNFl--~lLllt~q~~~----~~lF~~L~ 267 (336)
T 3lpz_A 194 VLPYLLVANVRAANTAYRIFTSALVEDNKGLTVQNIGSQSAELRIFPSLPLLNFI--SMLLLSVQKGS----PDLFRQLK 267 (336)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHCTTSCCEESCC--CCCEECTTCHHHHHH--HHHHHHHHSCC----HHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHhhcCCCccccccccCCcccccCCCCchHHHH--HHHHHHHhcCC----HHHHHHHH
Confidence 34577899999999988777765532200 0 1123332222 22223344454 34555555
Q ss_pred HHHHHhhCCCChhHHHHHHHHHHHHHhc
Q 010446 401 LITEKYKGKEHPSFVTHLLNLAASYSRS 428 (510)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~la~~~~~~ 428 (510)
+.+......+.+.....+..+|..|+..
T Consensus 268 ~~Y~~~l~rd~~~~~~~L~~IG~~YFgi 295 (336)
T 3lpz_A 268 SKYEANLNELNGIWDTALELIAEMYFGI 295 (336)
T ss_dssp HHTHHHHHTTTTTTHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHcCC
Confidence 4444443333225566777778877755
No 240
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.70 E-value=0.19 Score=46.48 Aligned_cols=105 Identities=12% Similarity=-0.088 Sum_probs=77.3
Q ss_pred HHHcCChHHHHHHHHHHHHHHHHhhCCC---C-----------hhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Q 010446 383 LHIVGRGQEGRELLEECLLITEKYKGKE---H-----------PSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKT 448 (510)
Q Consensus 383 ~~~~g~~~~A~~~~~~al~~~~~~~~~~---~-----------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 448 (510)
....|+.+.|...+.+|+.++...+-++ . .....+...++..+...|++.+|+..++.++..
T Consensus 125 ~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~---- 200 (388)
T 2ff4_A 125 AAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFE---- 200 (388)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred HHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh----
Confidence 3445777777777777776653211000 0 012234556788889999999999999988774
Q ss_pred hCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhcCCCC
Q 010446 449 VGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDS 495 (510)
Q Consensus 449 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 495 (510)
+|..-..+..+..++...|+..+|+..|+++.+...+-+|-+-
T Consensus 201 ----~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P 243 (388)
T 2ff4_A 201 ----HPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDP 243 (388)
T ss_dssp ----STTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred ----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence 5666667889999999999999999999999998888788654
No 241
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.20 E-value=0.86 Score=45.70 Aligned_cols=123 Identities=12% Similarity=0.090 Sum_probs=81.2
Q ss_pred hCC-hHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHH---HHHhhhcHHHHHHHHHHHHHHHHHhcC---CCC------
Q 010446 175 IGD-LKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGS---MYSTLENYEKSMLVYQRVINVLESRYG---KTS------ 241 (510)
Q Consensus 175 ~g~-~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~g~~~~A~~~~~~al~~~~~~~~---~~~------ 241 (510)
.|+ ++.|+.++++..... |.... ++..+. ......+--+|+....++++....... ..+
T Consensus 261 t~~~~~~a~~~le~L~~~~-------p~~~~-~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~ 332 (754)
T 4gns_B 261 TPSLVDFTIDYLKGLTKKD-------PIHDI-YYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARL 332 (754)
T ss_dssp CGGGHHHHHHHHHHHHHHC-------GGGHH-HHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHH
T ss_pred cccHHHHHHHHHHHHHhhC-------CchhH-HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccc
Confidence 445 477888888765432 32222 222221 112223455677777777754322111 111
Q ss_pred -hhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 010446 242 -ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRI 313 (510)
Q Consensus 242 -~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 313 (510)
+.....+...+..+...|+++-|+.+.++|+.. .|....+|..|+.+|..+|+|+.|+-.+..+
T Consensus 333 ~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~--------aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 333 MNCMSDLLNIQTNFLLNRGDYELALGVSNTSTEL--------ALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred cCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhc--------CchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 122345666788888999999999999999998 5777899999999999999999999877654
No 242
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.13 E-value=0.72 Score=42.57 Aligned_cols=118 Identities=14% Similarity=0.085 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCC-CCh-----------hHHHHHHHHHHHHHhhCChHHHHH
Q 010446 116 RQLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGN-KGI-----------EEVAILDIIALGYVYIGDLKFVQS 183 (510)
Q Consensus 116 ~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~-----------~~~~~~~~l~~~~~~~g~~~~A~~ 183 (510)
..+..+...+......|+...|...+.+|+.+++.-+-.+. ..+ ....+...++..+...|++.+++.
T Consensus 113 ~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~ 192 (388)
T 2ff4_A 113 GRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIA 192 (388)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 34556667777777889999999999999887643210000 110 112344566778889999999999
Q ss_pred HHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCC
Q 010446 184 LLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKT 240 (510)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 240 (510)
.+..+.... |..-.++..+..++...|+..+|+..|++........++-+
T Consensus 193 ~l~~~~~~~-------P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~ 242 (388)
T 2ff4_A 193 ELEALTFEH-------PYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGID 242 (388)
T ss_dssp HHHHHHHHS-------TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 998887653 33334577888899999999999999999998877665644
No 243
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=95.09 E-value=0.63 Score=35.19 Aligned_cols=68 Identities=10% Similarity=0.017 Sum_probs=51.0
Q ss_pred hhHHHHHHHHHHHHHhhCChH---HHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHH
Q 010446 159 IEEVAILDIIALGYVYIGDLK---FVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINV 232 (510)
Q Consensus 159 ~~~~~~~~~l~~~~~~~g~~~---~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 232 (510)
.....+.+.+++++....+.. +++.+++..... .+ .....+++.+|..+++.|+|++|..+.+..+++
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~----~~--~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~ 106 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE----AE--SRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 106 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH----CC--STHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc----Cc--cchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 345667788888888877655 566666665542 11 245667899999999999999999999999885
No 244
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.52 E-value=0.88 Score=45.62 Aligned_cols=123 Identities=7% Similarity=-0.050 Sum_probs=80.6
Q ss_pred CCC-HHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHH--HHc-CChHHHHHHHHHHHHHHHHhhCC---CC---
Q 010446 342 NGN-AEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELL--HIV-GRGQEGRELLEECLLITEKYKGK---EH--- 411 (510)
Q Consensus 342 ~g~-~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~--~~~-g~~~~A~~~~~~al~~~~~~~~~---~~--- 411 (510)
.|+ ++.|+.++++.... .+... ++...+.+. ... .+--+|+..+.++++........ .+
T Consensus 261 t~~~~~~a~~~le~L~~~-------~p~~~----~~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~ 329 (754)
T 4gns_B 261 TPSLVDFTIDYLKGLTKK-------DPIHD----IYYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADS 329 (754)
T ss_dssp CGGGHHHHHHHHHHHHHH-------CGGGH----HHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHH
T ss_pred cccHHHHHHHHHHHHHhh-------CCchh----HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhccccccc
Confidence 455 57788888886554 12111 112222222 122 23346888888777543221111 11
Q ss_pred ----hhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 010446 412 ----PSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEA 483 (510)
Q Consensus 412 ----~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 483 (510)
+.....+...+..+...|+++-|+++.++|+.. .|....+|..|+.+|..+|+++.|+-.+..+
T Consensus 330 ~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~--------aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 330 ARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTEL--------ALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred ccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhc--------CchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 222345666788888999999999999999985 5777889999999999999999999877766
No 245
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=94.44 E-value=0.63 Score=34.69 Aligned_cols=69 Identities=12% Similarity=0.016 Sum_probs=51.6
Q ss_pred ChhHHHHHHHHHHHHHhhCChH---HHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHH
Q 010446 158 GIEEVAILDIIALGYVYIGDLK---FVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINV 232 (510)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~g~~~---~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 232 (510)
+...+.+.+.+|+++....+.. +++.+++...+.. ......+++.+|..+++.|+|++|..+.+..+++
T Consensus 36 ~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~------~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~ 107 (134)
T 3o48_A 36 PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEA------ESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 107 (134)
T ss_dssp GGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHC------GGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred CCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC------cchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 3344567788888888776554 5666666655421 2346677999999999999999999999998875
No 246
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=94.00 E-value=3 Score=36.73 Aligned_cols=181 Identities=10% Similarity=-0.017 Sum_probs=101.8
Q ss_pred cCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHH
Q 010446 300 EGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDL 379 (510)
Q Consensus 300 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l 379 (510)
.|+|=+|...++.....+.+. .........+..-+..+.+.|++..|.++..-.++.+.+. ..+.. ......+
T Consensus 26 ~G~yYEAhQ~~Rtl~~Ry~~~--~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~----~~~~~-~~~~~rl 98 (312)
T 2wpv_A 26 AGDYYEAHQTLRTIANRYVRS--KSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLA----EVKVD-DISVARL 98 (312)
T ss_dssp HTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----TCCCS-HHHHHHH
T ss_pred ccChHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHc----CCCCC-HHHHHHH
Confidence 344445554444444333322 1222333444445556667777777777777777776653 11111 1233556
Q ss_pred HHHHHHcCChH-HHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHH--------HHHHHHHHhC
Q 010446 380 AELLHIVGRGQ-EGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRI--------CLDIMTKTVG 450 (510)
Q Consensus 380 a~~~~~~g~~~-~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~--------al~~~~~~~~ 450 (510)
..++.....-+ .=..+.++++....+..+ ........+..+|..|...|++.+|..+|-- ..++.-+...
T Consensus 99 ~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~-~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~ 177 (312)
T 2wpv_A 99 VRLIAELDPSEPNLKDVITGMNNWSIKFSE-YKFGDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLC 177 (312)
T ss_dssp HHHHTTCCTTCTTHHHHHHHHHHHHHHTSS-CTTCCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCchHHHHHHHHHHHHhhcCC-CCCCCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHH
Confidence 66655533222 235677778877766532 2233446788899999999999999987731 1111111111
Q ss_pred C---CChhhHHHHHHHH-HHHHhcCChHHHHHHHHHHHHHHH
Q 010446 451 P---DDQSISFPMLHLG-ITLYHLNRDKEAEKLVLEALYIRE 488 (510)
Q Consensus 451 ~---~~~~~~~~~~~la-~~~~~~g~~~~A~~~~~~al~~~~ 488 (510)
. ..|.....+...+ ..|...|+...|...+....+...
T Consensus 178 ~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~~~~f~~~~~ 219 (312)
T 2wpv_A 178 QVDDIEDSTVAEFFSRLVFNYLFISNISFAHESKDIFLERFI 219 (312)
T ss_dssp HTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHH
T ss_pred hcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Confidence 1 3344444443333 355678999999999988876653
No 247
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=93.80 E-value=1.2 Score=33.18 Aligned_cols=66 Identities=14% Similarity=0.074 Sum_probs=51.8
Q ss_pred hHHHHHHHHHHHHHcCChH---HHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 286 LVLPLFSLGSLFIKEGKAV---DAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 286 ~~~~~~~la~~~~~~g~~~---~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
...+.+++|+++.+..+.+ +++.+++..+.. +.......++.+|..+.+.|+|++|..+.+..+++
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~-------~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~ 107 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE-------AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 107 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH-------CGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-------CcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 4578899999999887653 566666655542 22346778899999999999999999999999887
No 248
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.65 E-value=0.75 Score=43.49 Aligned_cols=145 Identities=10% Similarity=0.096 Sum_probs=61.3
Q ss_pred HHHhhhcHHHHHHHHHHHH--HHHHHhc-CCCChhHHHHHHHHHHHHhhcCCHHHHHHHHH-------HHHHHHHHh-cC
Q 010446 212 MYSTLENYEKSMLVYQRVI--NVLESRY-GKTSILLVTSLLGMAKVLGSIGRAKKAVEIYH-------RVITILELN-RG 280 (510)
Q Consensus 212 ~~~~~g~~~~A~~~~~~al--~~~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~-------~al~~~~~~-~~ 280 (510)
.+...+++++|..+-...+ +...... ..-+...+.+|+..+.++...|+......... ..+...+.. ..
T Consensus 145 ~L~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr 224 (523)
T 4b4t_S 145 FLWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLK 224 (523)
T ss_dssp ----------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSC
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhcc
Confidence 3456788888888776555 2221110 01123456778888888888887765432211 222222222 22
Q ss_pred CCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 010446 281 TESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 359 (510)
Q Consensus 281 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 359 (510)
.+....+..++.+-+.|...+.++.|..+..++.-- .. ...+...+..++.+|.++..+++|.+|.+++..|+..+
T Consensus 225 ~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP--~~-~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rka 300 (523)
T 4b4t_S 225 HDNETKAMLINLILRDFLNNGEVDSASDFISKLEYP--HT-DVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKA 300 (523)
T ss_dssp SSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSC--TT-TSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSC
T ss_pred cCcchhHHHHHHHHHHHHccCcHHHHHHHHhcCcCC--cc-cCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 244556777888999999999999999999887410 00 01123456778889999999999999999999988753
No 249
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=93.65 E-value=7.4 Score=40.04 Aligned_cols=199 Identities=17% Similarity=0.155 Sum_probs=105.2
Q ss_pred hhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCC--CChhHHHHHHHH
Q 010446 174 YIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGK--TSILLVTSLLGM 251 (510)
Q Consensus 174 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~--~~~~~~~~~~~l 251 (510)
..|+.++++..+...+.. ....+......+++.+|.++...++ ++..++...+.-....-+. .......+-..+
T Consensus 386 h~g~~~~gl~~L~~yL~~--~~s~~~~ik~GAllaLGli~ag~~~--~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGL 461 (963)
T 4ady_A 386 HKGNLLEGKKVMAPYLPG--SRASSRFIKGGSLYGLGLIYAGFGR--DTTDYLKNIIVENSGTSGDEDVDVLLHGASLGI 461 (963)
T ss_dssp TSSCTTTHHHHHTTTSTT--SCCSCHHHHHHHHHHHHHHTTTTTH--HHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHH
T ss_pred ccCchHHHHHHHHHhccc--cCCCcHHHHHHHHHHHHHhcCCCcH--HHHHHHHHHHcCccccccccccHHHHHHHHHHH
Confidence 456666666655443220 0012223356667888888876664 5777666655432100000 012233455578
Q ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcch-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHH
Q 010446 252 AKVLGSIGRAKKAVEIYHRVITILELNRGTESADL-VLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGM 330 (510)
Q Consensus 252 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 330 (510)
|.++.-.++- ++.+.+...+.- +.... ..+-..+|.++...|+-+....++..+.+ ..+..+ .
T Consensus 462 Gla~~GS~~e-ev~e~L~~~L~d-------d~~~~~~~AalALGli~vGTgn~~ai~~LL~~~~e-------~~~e~v-r 525 (963)
T 4ady_A 462 GLAAMGSANI-EVYEALKEVLYN-------DSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQE-------TQHGNI-T 525 (963)
T ss_dssp HHHSTTCCCH-HHHHHHHHHHHT-------CCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH-------CSCHHH-H
T ss_pred HHHhcCCCCH-HHHHHHHHHHhc-------CCHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHhc-------cCcHHH-H
Confidence 8887777763 455555555431 12211 23456788888888887665555554443 123222 2
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 010446 331 AMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECL 400 (510)
Q Consensus 331 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 400 (510)
-...+|..+...|+.+.+....+.... ..++......-..+|..|...|+...-..++..+.
T Consensus 526 R~aalgLGll~~g~~e~~~~li~~L~~--------~~dp~vRygaa~alglAyaGTGn~~aIq~LL~~~~ 587 (963)
T 4ady_A 526 RGLAVGLALINYGRQELADDLITKMLA--------SDESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAV 587 (963)
T ss_dssp HHHHHHHHHHTTTCGGGGHHHHHHHHH--------CSCHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhCCChHHHHHHHHHHHh--------CCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhc
Confidence 224445555567777766665554332 12333333344667888888998654444665554
No 250
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=93.56 E-value=0.98 Score=35.84 Aligned_cols=101 Identities=11% Similarity=0.022 Sum_probs=66.1
Q ss_pred HHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 010446 172 YVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGM 251 (510)
Q Consensus 172 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 251 (510)
....|+++.|.+..+.. +. ...|..+|......|+++-|+.+|.++-+ +..+
T Consensus 15 AL~lg~l~~A~e~a~~l---------~~---~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D----------------~~~L 66 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL---------ND---SITWERLIQEALAQGNASLAEMIYQTQHS----------------FDKL 66 (177)
T ss_dssp HHHTTCHHHHHHHHHHH---------CC---HHHHHHHHHHHHHTTCHHHHHHHHHHTTC----------------HHHH
T ss_pred HHhcCCHHHHHHHHHHh---------CC---HHHHHHHHHHHHHcCChHHHHHHHHHhCC----------------HHHH
Confidence 45789999998886653 11 22488999999999999999999988632 2234
Q ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 010446 252 AKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRI 313 (510)
Q Consensus 252 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 313 (510)
..+|...|+.+.-....+.+... .-++....++...|+++++++++.+.
T Consensus 67 ~~Ly~~tg~~e~L~kla~iA~~~-------------g~~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 67 SFLYLVTGDVNKLSKMQNIAQTR-------------EDFGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHT-------------TCHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHhCCHHHHHHHHHHHHHC-------------ccHHHHHHHHHHcCCHHHHHHHHHHC
Confidence 55666677775544433333221 11223345677889999888887654
No 251
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=93.41 E-value=1 Score=35.68 Aligned_cols=101 Identities=16% Similarity=0.114 Sum_probs=64.6
Q ss_pred HHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHH
Q 010446 297 FIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMR 376 (510)
Q Consensus 297 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 376 (510)
....|+++.|.+..++. +. ...|..||......|+++-|+.+|.++-..
T Consensus 15 AL~lg~l~~A~e~a~~l----------~~---~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~------------------ 63 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL----------ND---SITWERLIQEALAQGNASLAEMIYQTQHSF------------------ 63 (177)
T ss_dssp HHHTTCHHHHHHHHHHH----------CC---HHHHHHHHHHHHHTTCHHHHHHHHHHTTCH------------------
T ss_pred HHhcCCHHHHHHHHHHh----------CC---HHHHHHHHHHHHHcCChHHHHHHHHHhCCH------------------
Confidence 45678888888775532 12 246888999999999999999999885443
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHH
Q 010446 377 IDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRIC 441 (510)
Q Consensus 377 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 441 (510)
..+.-+|...|+.+.-....+.+.. . .. ++.-..++...|+++++++.|.+.
T Consensus 64 ~~L~~Ly~~tg~~e~L~kla~iA~~----~---g~------~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 64 DKLSFLYLVTGDVNKLSKMQNIAQT----R---ED------FGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH----T---TC------HHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHH----C---cc------HHHHHHHHHHcCCHHHHHHHHHHC
Confidence 3355566667776554433332221 1 11 122234566788998888887654
No 252
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.98 E-value=3.3 Score=39.19 Aligned_cols=144 Identities=12% Similarity=0.057 Sum_probs=60.6
Q ss_pred HHhhcCCHHHHHHHHHHHH--HHHHHhc-CCCCcchHHHHHHHHHHHHHcCChHHHHHH-------HHHHHHHHHHHcC-
Q 010446 254 VLGSIGRAKKAVEIYHRVI--TILELNR-GTESADLVLPLFSLGSLFIKEGKAVDAESV-------FSRILKIYTKVYG- 322 (510)
Q Consensus 254 ~~~~~g~~~~A~~~~~~al--~~~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~-------~~~al~~~~~~~~- 322 (510)
.+...+++++|..+....+ +...... -.-+.-.+.+|+..+.++...|+....... -...+..++....
T Consensus 145 ~L~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr 224 (523)
T 4b4t_S 145 FLWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLK 224 (523)
T ss_dssp ----------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSC
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhcc
Confidence 3556788888888877665 2222110 001233456677777777777776553221 1122233333222
Q ss_pred CCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 323 ENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 402 (510)
Q Consensus 323 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 402 (510)
.+....+..++.+-..|...+.++.|..+..++. +.. ....+...+..++.+|.++.-+++|.+|.+++..|+..
T Consensus 225 ~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~---~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rk 299 (523)
T 4b4t_S 225 HDNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPH---TDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRK 299 (523)
T ss_dssp SSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCT---TTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSS
T ss_pred cCcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCc---ccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 2333456677888899999999999999998863 111 01234456777888999999999999999999998754
No 253
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=92.62 E-value=2.9 Score=32.55 Aligned_cols=97 Identities=16% Similarity=0.103 Sum_probs=70.3
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH----------H
Q 010446 249 LGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIY----------T 318 (510)
Q Consensus 249 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~----------~ 318 (510)
..++.+++-.|+|..++-++.. ..++.+.+.-+.||....+|..|+..++..++-- -
T Consensus 37 lL~~I~LyyngEY~R~Lf~L~~-------------lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~ 103 (242)
T 3kae_A 37 MLMSIVLYLNGEYTRALFHLHK-------------LNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARI 103 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT-------------CCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHH
T ss_pred hhhhhhhhhcchHhHHHHHHHh-------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccccccc
Confidence 3567788889999988766542 2356666777889999999999999999887310 0
Q ss_pred HHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 319 KVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 319 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
+.+-.+..+.-..+..+|.++...|+.+||+.++......
T Consensus 104 ~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~ 143 (242)
T 3kae_A 104 QEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGK 143 (242)
T ss_dssp HTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCC
Confidence 0111112223455778999999999999999999987765
No 254
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=92.61 E-value=1 Score=42.78 Aligned_cols=63 Identities=13% Similarity=0.168 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 010446 245 VTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILK 315 (510)
Q Consensus 245 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 315 (510)
..++..+|.+......+..|..+|.+|..+ .|..+..++.||.+....|+.-+|+-+|.+++.
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~--------~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~ 214 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQL--------VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIA 214 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHh--------CCCCCchHHHHHHHHhcccccHHHHHHHHHHHh
Confidence 356788999999999999999999999998 678899999999999999999999999998875
No 255
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=92.37 E-value=5.4 Score=35.09 Aligned_cols=145 Identities=11% Similarity=-0.024 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCC
Q 010446 118 LLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKD 197 (510)
Q Consensus 118 ~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 197 (510)
+...+.+....+..|+|-+|.+.++.......+ .....+..+.++.-+..+...|++..|..+....++.....+.
T Consensus 13 ~~r~l~rl~~~I~~G~yYEAhQ~~Rtl~~Ry~~----~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~ 88 (312)
T 2wpv_A 13 LAKTLQRFENKIKAGDYYEAHQTLRTIANRYVR----SKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEV 88 (312)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhccChHHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCC
Confidence 334555666667778888888777766555433 2223444556666666777778877777776666655554222
Q ss_pred CchHHHHHHHHHHHHHHhhhcHH-HHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHH
Q 010446 198 DEPLLDAILLHMGSMYSTLENYE-KSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYH 269 (510)
Q Consensus 198 ~~~~~~~~~~~l~~~~~~~g~~~-~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 269 (510)
.. . ......+..++.....-+ .=..+..+++....+. +.........+..+|..|...|++.+|..++-
T Consensus 89 ~~-~-~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~-g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 89 KV-D-DISVARLVRLIAELDPSEPNLKDVITGMNNWSIKF-SEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CC-S-HHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHT-SSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CC-C-HHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhc-CCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 11 1 112344555544322111 1245556666655543 22122334567778888888888888777764
No 256
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=91.62 E-value=3.5 Score=31.22 Aligned_cols=68 Identities=13% Similarity=0.073 Sum_probs=52.8
Q ss_pred cchHHHHHHHHHHHHHcCChH---HHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 010446 284 ADLVLPLFSLGSLFIKEGKAV---DAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 358 (510)
Q Consensus 284 ~~~~~~~~~la~~~~~~g~~~---~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 358 (510)
.....+.+++|+++....+.+ +++.+++..+.. .....-..++.+|..+.+.|+|++|..+.+..+++
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~-------~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~ 106 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE-------AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 106 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH-------CCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-------CccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 345778899999999887765 466666655542 22245678889999999999999999999999987
No 257
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=91.09 E-value=10 Score=40.63 Aligned_cols=105 Identities=12% Similarity=0.086 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHH-------------HHH--cCCCChHHHHHHHHHHHHHHHCCCHHHHHHH
Q 010446 287 VLPLFSLGSLFIKEGKAVDAESVFSRILKIY-------------TKV--YGENDGRVGMAMCSLAHAKCANGNAEEAVEL 351 (510)
Q Consensus 287 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-------------~~~--~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 351 (510)
....+.+|.++...|++++|..+|+++-.-. ... ...........|..+..++...|.++.++++
T Consensus 842 ~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~f 921 (1139)
T 4fhn_B 842 PIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEF 921 (1139)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred cHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3345789999999999999999998763210 000 0001111234577788889999999999999
Q ss_pred HHHHHHHHHhhccCCCCChH-HHHHHHHHHHHHHHcCChHHHHHHHH
Q 010446 352 YKKALRVIKDSNYMSLDDSI-MENMRIDLAELLHIVGRGQEGRELLE 397 (510)
Q Consensus 352 ~~~al~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~ 397 (510)
.+.|++.. .++++. ....+.++-..+...|+|++|...+.
T Consensus 922 a~lAi~~~------~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 922 SLLADASK------ETDDEDLSIAITHETLKTACAAGKFDAAHVALM 962 (1139)
T ss_dssp HHHHHHHC------CSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHH
T ss_pred HHHHHHhc------cCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 99998762 233332 33467888888999999999987764
No 258
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=90.17 E-value=9.6 Score=33.82 Aligned_cols=215 Identities=7% Similarity=-0.043 Sum_probs=116.7
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHcCCCC
Q 010446 247 SLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAV-DAESVFSRILKIYTKVYGEND 325 (510)
Q Consensus 247 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~-~A~~~~~~al~~~~~~~~~~~ 325 (510)
.++.-+..+.+.|++..|.++..-.++.+.+..- +........+..++.....-+ .=..+.++++....+. +...
T Consensus 57 LL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~---~~~~~~~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~~-g~~~ 132 (336)
T 3lpz_A 57 ILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQ---RVDGASRGKLLGCLRLFQPGEPVRKRFVKEMIDWSKKF-GDYP 132 (336)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC---CCCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHH-SSCT
T ss_pred HHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCC---CCCHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHhhc-CCCC
Confidence 3444455566667777777777777776666532 222344555666655544322 2355777888877664 2222
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHH-------H-HHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHH
Q 010446 326 GRVGMAMCSLAHAKCANGNAEEAVELYKK-------A-LRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLE 397 (510)
Q Consensus 326 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~-------a-l~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 397 (510)
.........+|..|.+.+++.+|..+|-. . ..+.-+.-. ...+...........-.|...++...|...+.
T Consensus 133 ~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~-~~~~~e~dlfiaRaVL~yL~l~n~~~A~~~~~ 211 (336)
T 3lpz_A 133 AGDPELHHVVGTLYVEEGEFEAAEKHLVLGTKESPEVLARMEYEWYK-QDESHTAPLYCARAVLPYLLVANVRAANTAYR 211 (336)
T ss_dssp TCCHHHHHHHHHHHHHTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHH-TSCGGGHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHccCCHHHHHHHHHhcCCchHHHHHHHHHHHHH-hcCCccHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 22345567789999999999999887621 1 111111000 01112222222333445678899999988877
Q ss_pred HHHHHHHHhhC-----------------CCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHH
Q 010446 398 ECLLITEKYKG-----------------KEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPM 460 (510)
Q Consensus 398 ~al~~~~~~~~-----------------~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 460 (510)
.-.+...+... +..|.. ....+...-++.+. ...|+...+.+...+..+.+.....+
T Consensus 212 ~f~~~l~~~~p~L~~q~~~~~~~~~~~~p~~PLL--NFl~lLllt~q~~~----~~lF~~L~~~Y~~~l~rd~~~~~~~L 285 (336)
T 3lpz_A 212 IFTSALVEDNKGLTVQNIGSQSAELRIFPSLPLL--NFISMLLLSVQKGS----PDLFRQLKSKYEANLNELNGIWDTAL 285 (336)
T ss_dssp HHHHHHHHHCTTSCCEESCC--CCCEECTTCHHH--HHHHHHHHHHHSCC----HHHHHHHHHHTHHHHHTTTTTTHHHH
T ss_pred HHHHHHhhcCCCccccccccCCcccccCCCCchH--HHHHHHHHHHhcCC----HHHHHHHHHHHHHHHHhcHHHHHHHH
Confidence 76655432211 012221 12222223344444 35566665555555544433677788
Q ss_pred HHHHHHHHhcCC
Q 010446 461 LHLGITLYHLNR 472 (510)
Q Consensus 461 ~~la~~~~~~g~ 472 (510)
..+|..|+....
T Consensus 286 ~~IG~~YFgi~~ 297 (336)
T 3lpz_A 286 ELIAEMYFGIQR 297 (336)
T ss_dssp HHHHHHHHCCCC
T ss_pred HHHHHHHcCCCC
Confidence 889999987643
No 259
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.82 E-value=12 Score=34.40 Aligned_cols=133 Identities=10% Similarity=0.002 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhc----------CCCchHHHHH
Q 010446 136 DAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSL----------KDDEPLLDAI 205 (510)
Q Consensus 136 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~----------~~~~~~~~~~ 205 (510)
.-+++|+..+.-+.... .|-. ....+..+.....+.++|.++++......... .........+
T Consensus 57 ~~~~ly~~fi~~f~~ki-----n~L~--lv~~~~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i 129 (393)
T 4b4t_O 57 LRLRLYDNFVSKFYDKI-----NQLS--VVKYLLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLI 129 (393)
T ss_dssp CCHHHHHHHHHHHHHHS-----CSHH--HHHTTHHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHH
T ss_pred HHHHHHHHHHHHHHHhc-----CHHH--HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHH
Confidence 34566666665554433 2211 11122344556788999999998764433211 0111223445
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 010446 206 LLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITIL 275 (510)
Q Consensus 206 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 275 (510)
...++..|...|+.++|..+++++-.......+.+....+..+...+..|...+++..+....-..+...
T Consensus 130 ~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~ 199 (393)
T 4b4t_O 130 DSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTL 199 (393)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhc
Confidence 6778999999999999999999998887776444445566777778888889999988777666665543
No 260
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=89.71 E-value=2.2 Score=40.55 Aligned_cols=62 Identities=15% Similarity=0.049 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 010446 416 THLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALY 485 (510)
Q Consensus 416 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 485 (510)
.++..||.+..-...+..|..+|.+|..+ .|.....+..||.+....|+.-+|.-+|.+++.
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~--------~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~ 214 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQL--------VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIA 214 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHh--------CCCCCchHHHHHHHHhcccccHHHHHHHHHHHh
Confidence 46778999999999999999999999996 678889999999999999999999999988864
No 261
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=88.16 E-value=14 Score=33.84 Aligned_cols=108 Identities=13% Similarity=-0.051 Sum_probs=73.9
Q ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHhhCC---------CChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhC
Q 010446 380 AELLHIVGRGQEGRELLEECLLITEKYKGK---------EHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVG 450 (510)
Q Consensus 380 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 450 (510)
..+.....+.++|.+++++......+.... .......+...++..|...|+.++|..+++++-.......+
T Consensus 83 ~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~ 162 (393)
T 4b4t_O 83 LASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDS 162 (393)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCC
Confidence 445556778899999988764433322111 11234566778899999999999999999999887776544
Q ss_pred CCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 010446 451 PDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 487 (510)
Q Consensus 451 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 487 (510)
.+..-....+...+..|...+++..+....-..+...
T Consensus 163 ~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~ 199 (393)
T 4b4t_O 163 IPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTL 199 (393)
T ss_dssp SSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhc
Confidence 4433455556667788888899887766655555433
No 262
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=87.06 E-value=13 Score=31.50 Aligned_cols=58 Identities=17% Similarity=0.131 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHh-cCChHHHHHHHHHHHHHHHH
Q 010446 431 FVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYH-LNRDKEAEKLVLEALYIREI 489 (510)
Q Consensus 431 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 489 (510)
.+.|...|++|.++. ..+.|.||.......+.+..|+. +|+.++|..+.++|+.-.-.
T Consensus 172 ~e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~ 230 (260)
T 2npm_A 172 AEDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIE 230 (260)
T ss_dssp HHHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 357889999999999 77889999988888888887776 89999999999888875544
No 263
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=86.99 E-value=5.4 Score=42.80 Aligned_cols=104 Identities=12% Similarity=-0.005 Sum_probs=71.6
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHh-------------hccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 010446 332 MCSLAHAKCANGNAEEAVELYKKALRVIKD-------------SNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEE 398 (510)
Q Consensus 332 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~-------------~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 398 (510)
.+.+|.++...|++++|..+|+++-..... .....+........|..+..++.+.|.++.++++.+.
T Consensus 845 ~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~l 924 (1139)
T 4fhn_B 845 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLL 924 (1139)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 467899999999999999999886321100 0000111122234567788899999999999999999
Q ss_pred HHHHHHHhhCCCChh-HHHHHHHHHHHHHhccCHHHHHHHHH
Q 010446 399 CLLITEKYKGKEHPS-FVTHLLNLAASYSRSKNFVEAERLLR 439 (510)
Q Consensus 399 al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~ 439 (510)
|++.. +++.+. ....+.++=..+...|+|++|...+.
T Consensus 925 Ai~~~----~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 925 ADASK----ETDDEDLSIAITHETLKTACAAGKFDAAHVALM 962 (1139)
T ss_dssp HHHHC----CSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHH
T ss_pred HHHhc----cCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 98753 223333 23357777788899999999977664
No 264
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=86.97 E-value=9.4 Score=32.54 Aligned_cols=124 Identities=12% Similarity=0.022 Sum_probs=78.0
Q ss_pred HHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHH
Q 010446 126 KSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAI 205 (510)
Q Consensus 126 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
..+.+.|+.++|+...+..++. .|.++.....+...+.-.|++++|...++.+.++... ....+..
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~----------~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~----~~~~a~~ 70 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKA----------SPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPE----YLPGASQ 70 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHT----------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGG----GHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHh----------CCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCch----hhHHHHH
Confidence 4567889999999999988876 8888888889999999999999999999988776521 1111111
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHHH--HHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 010446 206 LLHMGSMYSTLENYEKSMLVYQRVINVL--ESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITIL 275 (510)
Q Consensus 206 ~~~l~~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 275 (510)
|..+.. |+..=.+.+.-. ...++ .+.-......-+......|+.++|...-.++++..
T Consensus 71 yr~lI~----------aE~~R~~vfaG~~~P~~~g--~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~a 130 (273)
T 1zbp_A 71 LRHLVK----------AAQARKDFAQGAATAKVLG--ENEELTKSLVSFNLSMVSQDYEQVSELALQIEELR 130 (273)
T ss_dssp HHHHHH----------HHHHHHHHTTSCCCEECCC--SCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHH----------HHHHHHHHHcCCCCCCCCC--CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcC
Confidence 221111 111111111000 00011 12223333444566677899999999999998874
No 265
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=86.03 E-value=3.6 Score=27.98 Aligned_cols=46 Identities=13% Similarity=-0.074 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhcCCCCcchhHHH
Q 010446 457 SFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPGKLLT 502 (510)
Q Consensus 457 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 502 (510)
+..+...+..+...|+|++|+++.+++.....+.+.-.....++.+
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmkltqs~qa~~S 60 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKLTESEQAHLS 60 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 4455678888999999999999999999888877665544444443
No 266
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=85.17 E-value=16 Score=30.83 Aligned_cols=59 Identities=17% Similarity=0.089 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHh-cCChHHHHHHHHHHHHHHHH
Q 010446 431 FVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYH-LNRDKEAEKLVLEALYIREI 489 (510)
Q Consensus 431 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 489 (510)
.+.|...|++|.++....+.|.||.......+.+..|+. .++.++|..+.++|++-.-.
T Consensus 172 ~e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~ 231 (261)
T 3ubw_A 172 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIA 231 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 367889999999999888999999998888888887776 79999999998888775543
No 267
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=84.76 E-value=17 Score=30.78 Aligned_cols=182 Identities=9% Similarity=0.050 Sum_probs=96.8
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH-hhCChHHHHHHHHHHHHhhhhcCCCc
Q 010446 121 LFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYV-YIGDLKFVQSLLDMMSGIVDSLKDDE 199 (510)
Q Consensus 121 l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~ 199 (510)
++..+...-+.++|++...+..++.+. +........-.+.+..+|- ..|....+.+.+.....-.+. ...
T Consensus 11 ~v~~AkLaeqaeRyddm~~~mk~v~~~-------~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~-k~~- 81 (260)
T 1o9d_A 11 NVYMAKLAEQAERYEEMVEFMEKVSNS-------LGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEES-RGN- 81 (260)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHT-------CSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTC-
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHcc-------CCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhc-cCc-
Confidence 555677777889999999998887764 2001122222334444442 234444555554433222111 011
Q ss_pred hHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCC--CCh-hHHHHHHHHHHHHhhc-----C-----CHHHHHH
Q 010446 200 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGK--TSI-LLVTSLLGMAKVLGSI-----G-----RAKKAVE 266 (510)
Q Consensus 200 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~--~~~-~~~~~~~~la~~~~~~-----g-----~~~~A~~ 266 (510)
... ..+..-|. ..--.+=...+...+.+....+-+ .++ ..+-.+...|..|... | -.+.|..
T Consensus 82 ~~~----~~~i~~yr-~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~ 156 (260)
T 1o9d_A 82 EEH----VNSIREYR-SKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLT 156 (260)
T ss_dssp HHH----HHHHHHHH-HHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHH
T ss_pred HHH----HHHHHHHH-HHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHH
Confidence 111 11111121 111222334445555554443211 112 2222233345554432 2 1357888
Q ss_pred HHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHH-cCChHHHHHHHHHHHHH
Q 010446 267 IYHRVITILELNRGTESADLVLPLFSLGSLFIK-EGKAVDAESVFSRILKI 316 (510)
Q Consensus 267 ~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 316 (510)
.|++|.++......+.+|.......+.+..|+. +++.++|..+.+++..-
T Consensus 157 aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 207 (260)
T 1o9d_A 157 AYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (260)
T ss_dssp HHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 999999999877778888776666666666655 79999999888877764
No 268
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=84.65 E-value=16 Score=30.21 Aligned_cols=181 Identities=8% Similarity=-0.022 Sum_probs=100.3
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHhhccCCCCCh
Q 010446 292 SLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA-NGNAEEAVELYKKALRVIKDSNYMSLDDS 370 (510)
Q Consensus 292 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 370 (510)
.+|.+..+.++|++...+.+++.+.+.....+-.. .-.+.++.+|-. .|....+...+.. .++. .....
T Consensus 11 ~~AKlaeqaeRyddM~~~mk~v~~~~~~~~~eLt~---EERnLLSvAYKNvig~rR~swRiiss----iEqk---ek~~~ 80 (227)
T 2o8p_A 11 YRAQVFEWGGCFDKMFEALKSLIYLSEFENSEFDD---EERHLLTLCIKHKISDYRTMTSQVLQ----EQTK---QLNND 80 (227)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHH---SCSCH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhhhccCCCCCH---HHHHHHHHHHHHhhcccHHHHHHHHH----HHHH---HcCCH
Confidence 57888889999999999999988732111111111 112222222211 1222222222222 1111 00111
Q ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHH-----hccCHHHHHHHHHHHHHHH
Q 010446 371 IMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYS-----RSKNFVEAERLLRICLDIM 445 (510)
Q Consensus 371 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-----~~g~~~~A~~~~~~al~~~ 445 (510)
.. ..+..-|... =-.+=.......+.+..+.+-+.....+..+...|..|. ..|+.+.|...|+.|.++.
T Consensus 81 ~~----~~~i~~yr~k-ie~EL~~iC~dil~lld~~Lip~aEskVFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA 155 (227)
T 2o8p_A 81 EL----VKICSEYVFS-LRKDIKAFLQSFEDCVDRLVEKSFFSKFFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLL 155 (227)
T ss_dssp HH----HHHHHHHHHH-HHHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred HH----HHHHHHHHHH-HHHHHHHHHhhHHHHHHHhccCcHHHHHHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHH
Confidence 11 1122222211 112223345555555555433322122223333444443 4567899999999999999
Q ss_pred HHHhCCCChhhHHHHHHHHHHHH-hcCChHHHHHHHHHHHHHH
Q 010446 446 TKTVGPDDQSISFPMLHLGITLY-HLNRDKEAEKLVLEALYIR 487 (510)
Q Consensus 446 ~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~ 487 (510)
...+.|.||.......+.+..|+ -++++++|..+.++|+.+.
T Consensus 156 ~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 156 CEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp HHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 88788899988887788877766 5799999999999998864
No 269
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=84.55 E-value=18 Score=30.72 Aligned_cols=56 Identities=20% Similarity=0.170 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHh-cCChHHHHHHHHHHHHHH
Q 010446 432 VEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYH-LNRDKEAEKLVLEALYIR 487 (510)
Q Consensus 432 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 487 (510)
+.|...|++|.++....+.|.||.......+.+..|+. +|+.++|..+-++|+.-.
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~A 208 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 57889999999999888899999988888888887776 799999988877776544
No 270
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=84.43 E-value=7.4 Score=26.28 Aligned_cols=38 Identities=16% Similarity=0.113 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHH
Q 010446 115 ERQLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQI 152 (510)
Q Consensus 115 ~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~ 152 (510)
......+...|...-+.|++++|+.+|.++++.+....
T Consensus 16 ~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~al 53 (83)
T 2w2u_A 16 EEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLV 53 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 34455677888888999999999999999999887764
No 271
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=83.32 E-value=8.6 Score=26.18 Aligned_cols=37 Identities=5% Similarity=0.032 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHh
Q 010446 117 QLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQIN 153 (510)
Q Consensus 117 ~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 153 (510)
....+...+...-..|++++|+.+|.++++.+.....
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk 51 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLK 51 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHh
Confidence 4455777888889999999999999999998877653
No 272
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=81.21 E-value=14 Score=26.98 Aligned_cols=56 Identities=14% Similarity=0.173 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 010446 117 QLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGY 172 (510)
Q Consensus 117 ~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~ 172 (510)
....++..|...-..|+|++|+.+|..+++.+..........+.....+.....-|
T Consensus 17 kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~alk~e~~~~~~k~~lr~K~~eY 72 (117)
T 2cpt_A 17 KAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEY 72 (117)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence 44456777777788899999999999999988776543323444344444443333
No 273
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=81.15 E-value=23 Score=29.55 Aligned_cols=182 Identities=9% Similarity=0.013 Sum_probs=96.0
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh-hCChHHHHHHHHHHHHhhhhcCCCc
Q 010446 121 LFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVY-IGDLKFVQSLLDMMSGIVDSLKDDE 199 (510)
Q Consensus 121 l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~~~~~~~ 199 (510)
++..+...-+.++|++...+..++.+. + ......-.+.+..+|-. .|....+.+.+.....-.+..+.
T Consensus 8 ~v~~AklaeqaeRyddm~~~mk~v~~~-------~--~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~-- 76 (234)
T 2br9_A 8 LVYQAKLAEQAERYDEMVESMKKVAGM-------D--VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGG-- 76 (234)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTT-------C--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHhcc-------c--CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCc--
Confidence 455677777889999999988887653 1 12222333444444422 34344444444332221111011
Q ss_pred hHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCC--CCh-hHHHHHHHHHHHHhhcC----------CHHHHHH
Q 010446 200 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGK--TSI-LLVTSLLGMAKVLGSIG----------RAKKAVE 266 (510)
Q Consensus 200 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~--~~~-~~~~~~~~la~~~~~~g----------~~~~A~~ 266 (510)
... ..+..-|. ..=-.+=...+...+.+....+-+ .++ ..+-.+...|..|...- -.+.|..
T Consensus 77 ~~~----~~~i~~yr-~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~ 151 (234)
T 2br9_A 77 EDK----LKMIREYR-QMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLV 151 (234)
T ss_dssp HHH----HHHHHHHH-HHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred hHH----HHHHHHHH-HHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHH
Confidence 111 11111111 111122233444555554443211 111 12222333444443321 2357888
Q ss_pred HHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHH
Q 010446 267 IYHRVITILELNRGTESADLVLPLFSLGSLFIK-EGKAVDAESVFSRILKIYT 318 (510)
Q Consensus 267 ~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 318 (510)
.|++|.++......+.+|.......+.+..|+. .++.++|..+.+++..-.-
T Consensus 152 aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai 204 (234)
T 2br9_A 152 AYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 204 (234)
T ss_dssp HHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 999999999877778888776666666666655 8999999999888876543
No 274
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=79.07 E-value=29 Score=29.44 Aligned_cols=184 Identities=10% Similarity=0.035 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcC-CCChhHHHHHHHHHHHHHh-hCChHHHHHHHHHHHHhhhhcC
Q 010446 119 LELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAG-NKGIEEVAILDIIALGYVY-IGDLKFVQSLLDMMSGIVDSLK 196 (510)
Q Consensus 119 ~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~~~~ 196 (510)
..+...+...-+.++|++...+..++.+. + ........-.+.+..+|-. .|....+...+.....-.+.
T Consensus 29 e~~v~~AkLaeqaeRyddmv~~mk~v~~~-------~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~-- 99 (260)
T 2npm_A 29 ESNVYMAKLAEQAERYDEMAKYMKDVVEA-------RQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHS-- 99 (260)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHS-------CCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhc-------cCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhc--
Confidence 44666777778899999999999887764 1 0011222233444444422 34444444444332222111
Q ss_pred CCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCC--CCh-hHHHHHHHHHHHHhhcC----------CHHH
Q 010446 197 DDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGK--TSI-LLVTSLLGMAKVLGSIG----------RAKK 263 (510)
Q Consensus 197 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~--~~~-~~~~~~~~la~~~~~~g----------~~~~ 263 (510)
...... ..+..-| +..=-.+=...+...+.+....+-+ .++ ..+-.+...|..|...- -.+.
T Consensus 100 k~~~~~----~~~i~~y-r~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~ 174 (260)
T 2npm_A 100 RNAEDA----SKMCGKY-RSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAED 174 (260)
T ss_dssp TTCHHH----HHHHHHH-HHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred cCcHHH----HHHHHHH-HHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHH
Confidence 111111 1111111 1111122334445555554443211 111 12222333454444322 2357
Q ss_pred HHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHH
Q 010446 264 AVEIYHRVITILELNRGTESADLVLPLFSLGSLFIK-EGKAVDAESVFSRILKIY 317 (510)
Q Consensus 264 A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 317 (510)
|...|++|.++. ....+.+|-......+.+..|+. +++.++|..+.++|.+-.
T Consensus 175 a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~A 228 (260)
T 2npm_A 175 ALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMA 228 (260)
T ss_dssp HHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 888999999999 76777788766666666666655 799999999988887654
No 275
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=78.66 E-value=28 Score=29.03 Aligned_cols=59 Identities=19% Similarity=0.124 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHH-hcCChHHHHHHHHHHHHHHHH
Q 010446 431 FVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLY-HLNRDKEAEKLVLEALYIREI 489 (510)
Q Consensus 431 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~ 489 (510)
.+.|...|++|.++....+.|.||.......+.+..|+ -.+++++|..+.++|++-.-.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~ 208 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMA 208 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 46788999999999988899999999888888887777 569999999988888765443
No 276
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=77.97 E-value=6.4 Score=33.36 Aligned_cols=56 Identities=20% Similarity=0.156 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHHh--CCCChhhHHHHHHHHHHHH-hcCChHHHHHHHHHHHHH
Q 010446 431 FVEAERLLRICLDIMTKTV--GPDDQSISFPMLHLGITLY-HLNRDKEAEKLVLEALYI 486 (510)
Q Consensus 431 ~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~ 486 (510)
.+.|...|++|.++....+ .|.||.......+.+..|+ -++++++|..+.++|++-
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4678899999999998888 8899998888888888877 479999999999998876
No 277
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=76.92 E-value=33 Score=29.00 Aligned_cols=181 Identities=10% Similarity=0.050 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh-hCChHHHHHHHHHHHHhhhhcCCC
Q 010446 120 ELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVY-IGDLKFVQSLLDMMSGIVDSLKDD 198 (510)
Q Consensus 120 ~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~~~~~~ 198 (510)
.+...++..-+.++|++...+.+++.+. + ......-.+.+..+|-. .|....+.+.+....+..+. ..
T Consensus 33 ~lv~~AKLaeqaeRYddMv~~MK~v~~~-------~--~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~--~g 101 (261)
T 3ubw_A 33 DLVYQAKLAEQAERYDEMVESMKKVAGM-------D--VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEN--KG 101 (261)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTT-------C--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TT
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhc-------C--CcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhc--cc
Confidence 3555677778889999999888877653 1 12222333444445422 34444454444333222111 11
Q ss_pred chHHHHHHHHHHHHHHhhhcH-HHHHHHHHHHHHHHHHhcC--CCCh-hHHHHHHHHHHHHhhc-----CC-----HHHH
Q 010446 199 EPLLDAILLHMGSMYSTLENY-EKSMLVYQRVINVLESRYG--KTSI-LLVTSLLGMAKVLGSI-----GR-----AKKA 264 (510)
Q Consensus 199 ~~~~~~~~~~l~~~~~~~g~~-~~A~~~~~~al~~~~~~~~--~~~~-~~~~~~~~la~~~~~~-----g~-----~~~A 264 (510)
.... ..+..-|. .+. .+=...+...+.+....+- ..++ ..+-.+...|..|... |+ .+.|
T Consensus 102 ~~~~----~~~i~~yr--~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a 175 (261)
T 3ubw_A 102 GEDK----LKMIREYR--QMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENS 175 (261)
T ss_dssp CHHH----HHHHHHHH--HHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred cHHH----HHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHH
Confidence 1111 11111111 111 1223344445554433311 1112 2222233345554432 22 3678
Q ss_pred HHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHH
Q 010446 265 VEIYHRVITILELNRGTESADLVLPLFSLGSLFIK-EGKAVDAESVFSRILKIY 317 (510)
Q Consensus 265 ~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 317 (510)
...|++|.++.....++.+|-......+.+..|+. .++.++|..+.++|.+-.
T Consensus 176 ~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~A 229 (261)
T 3ubw_A 176 LVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 229 (261)
T ss_dssp HHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 89999999998887788888777666677766665 799999999888887654
No 278
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=76.77 E-value=16 Score=25.28 Aligned_cols=37 Identities=5% Similarity=0.085 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHh
Q 010446 117 QLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQIN 153 (510)
Q Consensus 117 ~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 153 (510)
....++..|...-..|+|++|+.+|..+++.+.....
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk 50 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLK 50 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 4445777888888999999999999999999877653
No 279
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=76.37 E-value=32 Score=28.63 Aligned_cols=60 Identities=17% Similarity=0.087 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHh-cCChHHHHHHHHHHHHHHHHh
Q 010446 431 FVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYH-LNRDKEAEKLVLEALYIREIA 490 (510)
Q Consensus 431 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~ 490 (510)
.+.|...|++|.++....+.|.||.......+.+..|+. .|+.++|..+-++|+.-.-..
T Consensus 146 ~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~e 206 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAE 206 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 367889999999999888899999988888888877776 899999999988888765543
No 280
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=75.82 E-value=35 Score=28.68 Aligned_cols=182 Identities=9% Similarity=0.046 Sum_probs=96.7
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH-hhCChHHHHHHHHHHHHhhhhcCCCc
Q 010446 121 LFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYV-YIGDLKFVQSLLDMMSGIVDSLKDDE 199 (510)
Q Consensus 121 l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~ 199 (510)
+...++..-+.++|++...+.+++... + ......-.+.+..+|- ..|....+.+.+....+-....+..
T Consensus 7 lv~~AklaeqaeRyddM~~~Mk~v~~~-------~--~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~- 76 (248)
T 3uzd_A 7 LVQKARLAEQAERYDDMAAAMKNVTEL-------N--EPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNE- 76 (248)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTT-------C--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CC-
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhc-------C--CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCH-
Confidence 556777778899999999888877653 1 1222233344445552 2344445555443332221111111
Q ss_pred hHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcC---CCC--hhHHHHHHHHHHHHhhc-----C-----CHHHH
Q 010446 200 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYG---KTS--ILLVTSLLGMAKVLGSI-----G-----RAKKA 264 (510)
Q Consensus 200 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---~~~--~~~~~~~~~la~~~~~~-----g-----~~~~A 264 (510)
... .+..-|. ..=-.+=...+...+.+....+- .+. ...+-.+...|..|... | -.+.|
T Consensus 77 ~~~-----~~i~~yr-~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a 150 (248)
T 3uzd_A 77 KKI-----EMVRAYR-EKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESS 150 (248)
T ss_dssp C-H-----HHHHHHH-HHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHH-----HHHHHHH-HHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHH
Confidence 111 1111111 11111222344444444433321 111 12222333445555432 2 23678
Q ss_pred HHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHH
Q 010446 265 VEIYHRVITILELNRGTESADLVLPLFSLGSLFIK-EGKAVDAESVFSRILKIYT 318 (510)
Q Consensus 265 ~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 318 (510)
...|++|.++.....++.||-......+.+..|+. +++.++|..+.++|.+-.-
T Consensus 151 ~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai 205 (248)
T 3uzd_A 151 EKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAI 205 (248)
T ss_dssp HHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 89999999999887788888776666666666554 7999999998888876543
No 281
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=74.97 E-value=16 Score=24.29 Aligned_cols=36 Identities=14% Similarity=0.286 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHh
Q 010446 118 LLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQIN 153 (510)
Q Consensus 118 ~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 153 (510)
+..-...|+.+...|+|+.|+.+|+.+++.+.+.+.
T Consensus 12 i~e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~ 47 (78)
T 2rpa_A 12 IVENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLY 47 (78)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 444667899999999999999999999998877653
No 282
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=74.93 E-value=37 Score=28.54 Aligned_cols=58 Identities=17% Similarity=0.140 Sum_probs=47.4
Q ss_pred hHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHH
Q 010446 389 GQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSR-SKNFVEAERLLRICLDIMT 446 (510)
Q Consensus 389 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 446 (510)
.+.|...|++|..+....+.+.||.......+.+..|.. .++.++|..+.+++.+-.-
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai 205 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAI 205 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 367889999999999888888999887777777776665 7999999999888877543
No 283
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=73.48 E-value=18 Score=24.35 Aligned_cols=36 Identities=17% Similarity=0.064 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHH
Q 010446 117 QLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQI 152 (510)
Q Consensus 117 ~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~ 152 (510)
....+...|...-+.|++.+|+.+|.++++.+...+
T Consensus 10 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~l 45 (83)
T 2v6y_A 10 MARKYAILAVKADKEGKVEDAITYYKKAIEVLSQII 45 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 444577788888999999999999999999887765
No 284
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=71.92 E-value=97 Score=32.09 Aligned_cols=199 Identities=16% Similarity=0.162 Sum_probs=106.3
Q ss_pred HHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCC---chHHHH
Q 010446 128 MIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDD---EPLLDA 204 (510)
Q Consensus 128 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~---~~~~~~ 204 (510)
....|+.++++..+.+-+.. .......-...+++.+|.++...+ .++..++...+.-......+ ......
T Consensus 384 lIh~g~~~~gl~~L~~yL~~-----~~s~~~~ik~GAllaLGli~ag~~--~~~~~lL~~~L~~~~~~~~~~~~~~ir~g 456 (963)
T 4ady_A 384 VIHKGNLLEGKKVMAPYLPG-----SRASSRFIKGGSLYGLGLIYAGFG--RDTTDYLKNIIVENSGTSGDEDVDVLLHG 456 (963)
T ss_dssp HHTSSCTTTHHHHHTTTSTT-----SCCSCHHHHHHHHHHHHHHTTTTT--HHHHHHHHHHHHHHSSCCSCHHHHHHHHH
T ss_pred hhccCchHHHHHHHHHhccc-----cCCCcHHHHHHHHHHHHHhcCCCc--HHHHHHHHHHHcCccccccccccHHHHHH
Confidence 34566666666555543310 001112234566777777766555 46777666655432110011 122223
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChh-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCC
Q 010446 205 ILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSIL-LVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTES 283 (510)
Q Consensus 205 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 283 (510)
+-..+|.++.-.++ +++.+.+...+. .++.. ...+-..+|.++.-.|+-+-...++..+.+ +.
T Consensus 457 AaLGLGla~~GS~~-eev~e~L~~~L~-------dd~~~~~~~AalALGli~vGTgn~~ai~~LL~~~~e--------~~ 520 (963)
T 4ady_A 457 ASLGIGLAAMGSAN-IEVYEALKEVLY-------NDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQE--------TQ 520 (963)
T ss_dssp HHHHHHHHSTTCCC-HHHHHHHHHHHH-------TCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH--------CS
T ss_pred HHHHHHHHhcCCCC-HHHHHHHHHHHh-------cCCHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHhc--------cC
Confidence 45577777776665 344555544443 12221 224556788888889987766666555443 12
Q ss_pred cchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 010446 284 ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRV-GMAMCSLAHAKCANGNAEEAVELYKKAL 356 (510)
Q Consensus 284 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~al 356 (510)
.+...-...+|..+...|+.+.+....+..... .+|.. ..+...+|..|...|+...-..++..+.
T Consensus 521 ~e~vrR~aalgLGll~~g~~e~~~~li~~L~~~-------~dp~vRygaa~alglAyaGTGn~~aIq~LL~~~~ 587 (963)
T 4ady_A 521 HGNITRGLAVGLALINYGRQELADDLITKMLAS-------DESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAV 587 (963)
T ss_dssp CHHHHHHHHHHHHHHTTTCGGGGHHHHHHHHHC-------SCHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhhCCChHHHHHHHHHHHhC-------CCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhc
Confidence 222333344555566778887777665544331 33432 2334567888999999755544665554
No 285
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=71.66 E-value=41 Score=27.69 Aligned_cols=83 Identities=12% Similarity=0.028 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHhh-CCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhc
Q 010446 392 GRELLEECLLITEKYK-GKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHL 470 (510)
Q Consensus 392 A~~~~~~al~~~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~ 470 (510)
=..++++++..+.... -.+++....+|...+.. .+++...|.-... + .-....+..|...|..+...
T Consensus 96 L~~lLErc~~~F~~~~rYknD~RyLklWl~Ya~~------~~~p~~if~~L~~---~---~IG~~~AlfYe~wA~~lE~~ 163 (223)
T 4aez_C 96 LVTLLERCTREFVRNPLYKDDVRYLRIWMQYVNY------IDEPVELFSFLAH---H---HIGQESSIFYEEYANYFESR 163 (223)
T ss_dssp HHHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHTT------CSCHHHHHHHHHH---T---TCSTTBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcccccccCCHHHHHHHHHHHHc------cCCHHHHHHHHHH---C---CcchhHHHHHHHHHHHHHHc
Confidence 3467777776653321 12466667777766653 1355566665544 1 22345566778889999999
Q ss_pred CChHHHHHHHHHHHHH
Q 010446 471 NRDKEAEKLVLEALYI 486 (510)
Q Consensus 471 g~~~~A~~~~~~al~~ 486 (510)
|++.+|...|+..++.
T Consensus 164 g~~~~A~~Vy~~Gi~~ 179 (223)
T 4aez_C 164 GLFQKADEVYQKGKRM 179 (223)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc
Confidence 9999999999998873
No 286
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=71.17 E-value=40 Score=27.28 Aligned_cols=85 Identities=18% Similarity=0.205 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHhh-CCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCC
Q 010446 394 ELLEECLLITEKYK-GKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNR 472 (510)
Q Consensus 394 ~~~~~al~~~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 472 (510)
.++++++..+.... -.+++....+|...+..+ ..++..++...|.-...- - -....+..|...|..+...|+
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~---~---IG~~~AlfYe~wA~~lE~~g~ 130 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNK---G---IGTKLSLFYEEFSKLLENAQF 130 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHH---T---SSTTBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHC---C---CcHHHHHHHHHHHHHHHHcCC
Confidence 57777777654321 135677778888777765 234467888888876652 2 234456678889999999999
Q ss_pred hHHHHHHHHHHHH
Q 010446 473 DKEAEKLVLEALY 485 (510)
Q Consensus 473 ~~~A~~~~~~al~ 485 (510)
+.+|...|+..++
T Consensus 131 ~~~A~~Vy~~GI~ 143 (202)
T 3esl_A 131 FLEAKVLLELGAE 143 (202)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999876
No 287
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=70.47 E-value=14 Score=25.17 Aligned_cols=36 Identities=11% Similarity=0.039 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHh
Q 010446 371 IMENMRIDLAELLHIVGRGQEGRELLEECLLITEKY 406 (510)
Q Consensus 371 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 406 (510)
..+..+...++.+...|+|++|+++.+++.....+.
T Consensus 13 n~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eA 48 (97)
T 2crb_A 13 NLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEA 48 (97)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 345667788999999999999999999988766544
No 288
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=70.45 E-value=85 Score=30.80 Aligned_cols=127 Identities=13% Similarity=0.069 Sum_probs=77.6
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHH
Q 010446 336 AHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFV 415 (510)
Q Consensus 336 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 415 (510)
+.......+.+.|...+....... .-+..........++.-....+...++...+.+... ........
T Consensus 221 ~~~rlar~d~~~A~~~~~~~~~~~------~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 288 (618)
T 1qsa_A 221 AFASVARQDAENARLMIPSLAQAQ------QLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIM------RSQSTSLI 288 (618)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHT------TCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHH------TCCCHHHH
T ss_pred HHHHHHhcCHHHHHHHHHhhhhcc------CCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccc------cCCChHHH
Confidence 334444557888888887654421 123333334444555555555646677777765432 11222222
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 010446 416 THLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALY 485 (510)
Q Consensus 416 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 485 (510)
. ...+ .....|+++.|..+++..-. .........+.+|.++...|+.++|..+|+++..
T Consensus 289 e--~~~r-~Alr~~d~~~a~~~~~~l~~--------~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 289 E--RRVR-MALGTGDRRGLNTWLARLPM--------EAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp H--HHHH-HHHHHTCHHHHHHHHHHSCT--------TGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred H--HHHH-HHHHCCCHHHHHHHHHHccc--------cccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 2 2223 34466999999998865432 2234556679999999999999999999998864
No 289
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=69.31 E-value=47 Score=27.41 Aligned_cols=181 Identities=11% Similarity=0.012 Sum_probs=100.8
Q ss_pred HHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh-hCChHHHHHHHHHHHHhhhhcCCCchH
Q 010446 123 NEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVY-IGDLKFVQSLLDMMSGIVDSLKDDEPL 201 (510)
Q Consensus 123 ~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~~~~~~~~~ 201 (510)
..+...-+.++|++...+..++.+..... +. .....-.+.+..+|-. .|....+.+.+.....-. .....
T Consensus 11 ~~AKlaeqaeRyddM~~~mk~v~~~~~~~---~~--eLt~EERnLLSvAYKNvig~rR~swRiissiEqke----k~~~~ 81 (227)
T 2o8p_A 11 YRAQVFEWGGCFDKMFEALKSLIYLSEFE---NS--EFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ----LNNDE 81 (227)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHH---TC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS----CSCHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhhhcc---CC--CCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH----cCCHH
Confidence 46677788999999999988887621100 11 1222233444444422 344444444443322211 11111
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHh-----hcCCHHHHHHHHHHHHHHHH
Q 010446 202 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLG-----SIGRAKKAVEIYHRVITILE 276 (510)
Q Consensus 202 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-----~~g~~~~A~~~~~~al~~~~ 276 (510)
. ..+..-|.. .--.+=...+...+.+..+.+-+.....+-.+...|..|. ..|+.+.|...|+.|.++..
T Consensus 82 ~----~~~i~~yr~-kie~EL~~iC~dil~lld~~Lip~aEskVFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~ 156 (227)
T 2o8p_A 82 L----VKICSEYVF-SLRKDIKAFLQSFEDCVDRLVEKSFFSKFFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLC 156 (227)
T ss_dssp H----HHHHHHHHH-HHHHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH
T ss_pred H----HHHHHHHHH-HHHHHHHHHHhhHHHHHHHhccCcHHHHHHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHH
Confidence 1 112222211 1122333456666666665544432222222333444443 45778999999999999998
Q ss_pred HhcCCCCcchHHHHHHHHHHH-HHcCChHHHHHHHHHHHHHH
Q 010446 277 LNRGTESADLVLPLFSLGSLF-IKEGKAVDAESVFSRILKIY 317 (510)
Q Consensus 277 ~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~ 317 (510)
...++.||-......+.+..| .-+++.++|..+.++|+.+.
T Consensus 157 ~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 157 EHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp HCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred hhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 766667776655555555554 56799999999999998764
No 290
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=69.06 E-value=15 Score=24.98 Aligned_cols=34 Identities=15% Similarity=0.018 Sum_probs=26.4
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHhcCCC
Q 010446 461 LHLGITLYHLNRDKEAEKLVLEALYIREIAFGKD 494 (510)
Q Consensus 461 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 494 (510)
..-|.-....|++++|+.+|.++++.+.......
T Consensus 20 v~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e 53 (86)
T 4a5x_A 20 LKRAVELDSESRYPQALVCYQEGIDLLLQVLKGT 53 (86)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 4445555788999999999999999988765433
No 291
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=69.04 E-value=29 Score=27.03 Aligned_cols=81 Identities=14% Similarity=0.103 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHhh-CCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcC
Q 010446 393 RELLEECLLITEKYK-GKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLN 471 (510)
Q Consensus 393 ~~~~~~al~~~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 471 (510)
..++++++..+.... -.+++....++...+... ++ +.+.|..... + .-....+..|...|..+...|
T Consensus 43 ~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~---~~---p~~if~~L~~---~---~IG~~~AlfY~~wA~~lE~~~ 110 (164)
T 2wvi_A 43 STLLERAVEALQGEKRYYSDPRFLNLWLKLGRLC---NE---PLDMYSYLHN---Q---GIGVSLAQFYISWAEEYEARE 110 (164)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHHHC---SC---HHHHHHHHHH---T---TSSTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHhc---CC---HHHHHHHHHH---C---CcchhhHHHHHHHHHHHHHcC
Confidence 445666666543210 135667777777776653 33 5556665544 1 223445667788899999999
Q ss_pred ChHHHHHHHHHHHH
Q 010446 472 RDKEAEKLVLEALY 485 (510)
Q Consensus 472 ~~~~A~~~~~~al~ 485 (510)
++.+|...|+..++
T Consensus 111 ~~~~A~~Iy~~Gi~ 124 (164)
T 2wvi_A 111 NFRKADAIFQEGIQ 124 (164)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999999887
No 292
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=65.42 E-value=64 Score=27.51 Aligned_cols=123 Identities=13% Similarity=0.071 Sum_probs=73.8
Q ss_pred HHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccCCCCChHHHHH
Q 010446 296 LFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENM 375 (510)
Q Consensus 296 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 375 (510)
...+.|+.++|+......++ ..|..+.....+..+++-.|+++.|..-++-+.++. ++....+..
T Consensus 6 ~ll~~g~L~~al~~~~~~VR--------~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~-------p~~~~~a~~ 70 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIK--------ASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLF-------PEYLPGASQ 70 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHH--------TCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-------GGGHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHH--------hCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC-------chhhHHHHH
Confidence 35567899999998888877 456666777778888999999999999998888772 333222222
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHH--HHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Q 010446 376 RIDLAELLHIVGRGQEGRELLEECLLIT--EKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIM 445 (510)
Q Consensus 376 ~~~la~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 445 (510)
|..+..+ +..=.+.+.-. .... ..|.-......-+......|+.++|...-.++++..
T Consensus 71 yr~lI~a----------E~~R~~vfaG~~~P~~~--g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~a 130 (273)
T 1zbp_A 71 LRHLVKA----------AQARKDFAQGAATAKVL--GENEELTKSLVSFNLSMVSQDYEQVSELALQIEELR 130 (273)
T ss_dssp HHHHHHH----------HHHHHHHTTSCCCEECC--CSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHH----------HHHHHHHHcCCCCCCCC--CCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcC
Confidence 2222111 11101110000 0001 112222233344556667899999999999998853
No 293
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=64.97 E-value=76 Score=28.24 Aligned_cols=70 Identities=20% Similarity=0.186 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Q 010446 375 MRIDLAELLHIV--GRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTK 447 (510)
Q Consensus 375 ~~~~la~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 447 (510)
++.+||++-... .....++.+|.+++...+..+++.|. .-|..+|..+.+.+++.+|+..+.++-...+.
T Consensus 257 ALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~Hv---YPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~ 328 (472)
T 3re2_A 257 AIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHI---YPYTYLGGYYYRKKKYYEAIASWVDAGYVAGK 328 (472)
T ss_dssp HHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred hhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCc---cchhhhhhhhhhcchHHHHHHHHHHHHHHHHH
Confidence 335555554322 22234889999999999988766553 34667888999999999999999988876544
No 294
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=64.95 E-value=20 Score=24.82 Aligned_cols=34 Identities=15% Similarity=0.030 Sum_probs=25.6
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHhcCCC
Q 010446 461 LHLGITLYHLNRDKEAEKLVLEALYIREIAFGKD 494 (510)
Q Consensus 461 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 494 (510)
...|.-....|++++|+.+|..+++.+.......
T Consensus 19 v~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e 52 (93)
T 1wfd_A 19 LKRAVELDAESRYQQALVCYQEGIDMLLQVLKGT 52 (93)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 3344445678999999999999999988765443
No 295
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=64.34 E-value=46 Score=25.91 Aligned_cols=82 Identities=16% Similarity=0.241 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhc
Q 010446 349 VELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRS 428 (510)
Q Consensus 349 ~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~ 428 (510)
..++++++..+...... .+++....++...+... +++..+|...... ..-...+..|...|..+...
T Consensus 43 ~~lLErc~~~f~~~~~Y-knD~RyLklWl~ya~~~------~~p~~if~~L~~~------~IG~~~AlfY~~wA~~lE~~ 109 (164)
T 2wvi_A 43 STLLERAVEALQGEKRY-YSDPRFLNLWLKLGRLC------NEPLDMYSYLHNQ------GIGVSLAQFYISWAEEYEAR 109 (164)
T ss_dssp HHHHHHHHHHTTTCGGG-TTCHHHHHHHHHHHHHC------SCHHHHHHHHHHT------TSSTTBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhhhhh-ccCHHHHHHHHHHHHhc------CCHHHHHHHHHHC------CcchhhHHHHHHHHHHHHHc
Confidence 44677777766543222 34555666777666653 3355566554331 12334567788899999999
Q ss_pred cCHHHHHHHHHHHHH
Q 010446 429 KNFVEAERLLRICLD 443 (510)
Q Consensus 429 g~~~~A~~~~~~al~ 443 (510)
|++.+|.+.|+.+++
T Consensus 110 ~~~~~A~~Iy~~Gi~ 124 (164)
T 2wvi_A 110 ENFRKADAIFQEGIQ 124 (164)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999999988
No 296
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=62.39 E-value=33 Score=23.13 Aligned_cols=36 Identities=8% Similarity=0.062 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHH
Q 010446 117 QLLELFNEVKSMIMMGNKNDAIDLLQANYEAVKEQI 152 (510)
Q Consensus 117 ~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~ 152 (510)
....+...+...-..|++++|+.+|..+++.+....
T Consensus 12 ~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~ 47 (85)
T 2v6x_A 12 KGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLAL 47 (85)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 444566777778889999999999999999877654
No 297
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=61.97 E-value=46 Score=25.51 Aligned_cols=81 Identities=14% Similarity=0.078 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHh-hCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcC
Q 010446 393 RELLEECLLITEKY-KGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLN 471 (510)
Q Consensus 393 ~~~~~~al~~~~~~-~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 471 (510)
..++++++...... .-.+++....++...+... +++.+.|.-... + .-....+..|...|..+...|
T Consensus 48 ~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~------~dp~~if~~L~~---~---~IG~~~AlfYe~wA~~lE~~g 115 (152)
T 4a1g_A 48 ITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEYN------SDLHQFFEFLYN---H---GIGTLSSPLYIAWAGHLEAQG 115 (152)
T ss_dssp HHHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTTB------SCHHHHHHHHHT---T---TTTTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcccccccCCHHHHHHHHHHHHhc------CCHHHHHHHHHH---C---CCcHHHHHHHHHHHHHHHHcC
Confidence 34555655554221 1134666667776666542 336666665544 1 223445667788899999999
Q ss_pred ChHHHHHHHHHHHH
Q 010446 472 RDKEAEKLVLEALY 485 (510)
Q Consensus 472 ~~~~A~~~~~~al~ 485 (510)
++.+|...|+..++
T Consensus 116 ~~~~A~~Vy~~Gi~ 129 (152)
T 4a1g_A 116 ELQHASAVLQRGIQ 129 (152)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999999987
No 298
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=61.78 E-value=88 Score=27.87 Aligned_cols=74 Identities=16% Similarity=0.128 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Q 010446 286 LVLPLFSLGSLFIKE--GKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDS 362 (510)
Q Consensus 286 ~~~~~~~la~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 362 (510)
...++.+||.+-... .....++.+|.+++...+..+++.|. .-|..+|-.+++.+++.+|+..+-++-.....-
T Consensus 254 YPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~Hv---YPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~Y 329 (472)
T 3re2_A 254 YPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHI---YPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKY 329 (472)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS
T ss_pred CchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCc---cchhhhhhhhhhcchHHHHHHHHHHHHHHHHHc
Confidence 345556666554332 22234899999999999998876553 456668889999999999999999988876653
No 299
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=61.02 E-value=19 Score=24.35 Aligned_cols=30 Identities=20% Similarity=0.084 Sum_probs=23.5
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHhcC
Q 010446 463 LGITLYHLNRDKEAEKLVLEALYIREIAFG 492 (510)
Q Consensus 463 la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 492 (510)
.|.-....|++++|+.+|.++++.+.....
T Consensus 19 ~Av~~D~~g~y~eAl~~Y~~aie~l~~a~k 48 (85)
T 2v6x_A 19 KAIDLDTATQYEEAYTAYYNGLDYLMLALK 48 (85)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 334456789999999999999998877653
No 300
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=60.43 E-value=19 Score=23.88 Aligned_cols=44 Identities=14% Similarity=-0.008 Sum_probs=33.0
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHHHHHhcCCCCcchhHHHHh
Q 010446 460 MLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPGKLLTVW 504 (510)
Q Consensus 460 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 504 (510)
...+|+=|...|+|+.|..+|+.+++...+.+..-+ ++....-|
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~~-d~~~r~kW 58 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVK-DTHLRQKW 58 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCS-CHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhcC-CHHHHHhH
Confidence 367888899999999999999999988777655444 33443333
No 301
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=59.60 E-value=37 Score=22.86 Aligned_cols=32 Identities=16% Similarity=0.243 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHHHHHHH
Q 010446 116 RQLLELFNEVKSMIMMGNKNDAIDLLQANYEA 147 (510)
Q Consensus 116 ~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~ 147 (510)
..++.++..+..+++.|+|.+|..+++++...
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 45667888999999999999999999998865
No 302
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=58.40 E-value=1.1e+02 Score=27.90 Aligned_cols=73 Identities=22% Similarity=0.249 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Q 010446 287 VLPLFSLGSLFIKEG--KAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDS 362 (510)
Q Consensus 287 ~~~~~~la~~~~~~g--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 362 (510)
..++.+||.+-...- ....++.+|.+|+...+..+.+.+ ..-|..+|-.+.+.+++.+|+..+.++-.....-
T Consensus 262 PmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~h---vYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~Y 336 (489)
T 4gq4_A 262 PMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEH---IYPYMYLAGYHCRNRNVREALQAWADTATVIQDY 336 (489)
T ss_dssp HHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCC---SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS
T ss_pred chhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCc---ccceeecchHHHHhhhHHHHHHHhhhhhhhhhhc
Confidence 445555555543221 223578899999999999887655 3456778999999999999999999998887654
No 303
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=58.07 E-value=81 Score=26.26 Aligned_cols=183 Identities=15% Similarity=0.058 Sum_probs=96.8
Q ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHHHcC-CCC
Q 010446 248 LLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIK-EGKAVDAESVFSRILKIYTKVYG-END 325 (510)
Q Consensus 248 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~-~~~ 325 (510)
+..+|.+..+.++|++...+.+++.+. +......-.+.+..+|-. .|....+.+.+... +..+..-| +..
T Consensus 11 ~v~~AklaeqaeRyddM~~~mk~v~~~-------~~eLs~EERnLLSvaYKNvig~rR~swRiissi-eqke~~~~~~~~ 82 (236)
T 3iqu_A 11 LIQKAKLAEQAERYEDMAAFMKGAVEK-------GEELSCEERNLLSVAYKNVVGGQRAAWRVLSSI-EQKSNEEGSEEK 82 (236)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHT-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTSTTCCCC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhc-------CCcCCHHHHHHHHHHHHhhcccchHHHHHHHHH-HHHHhhcCCHHH
Confidence 456788888999999999999888764 223333344445555432 12222333332211 11111011 111
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccC-CCCChHHHHHHHHHHHHHHH-----cCC-----hHHHHH
Q 010446 326 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYM-SLDDSIMENMRIDLAELLHI-----VGR-----GQEGRE 394 (510)
Q Consensus 326 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~-~~~~~~~~~~~~~la~~~~~-----~g~-----~~~A~~ 394 (510)
...+.-+.... -.+-.......+.+....... ..+.......+-..|..|.- .|+ .+.|..
T Consensus 83 ~~~i~~yr~ki--------e~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~ 154 (236)
T 3iqu_A 83 GPEVREYREKV--------ETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARS 154 (236)
T ss_dssp CSHHHHHHHHH--------HHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHH--------HHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHH
Confidence 11111111100 011222333344443321000 11122222223334555432 343 367889
Q ss_pred HHHHHHHHHHHhhCCCChhHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHH
Q 010446 395 LLEECLLITEKYKGKEHPSFVTHLLNLAASYS-RSKNFVEAERLLRICLDIMT 446 (510)
Q Consensus 395 ~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 446 (510)
.|++|.++......+.||.......+.+..|. -.++.++|..+.+++.+-.-
T Consensus 155 aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai 207 (236)
T 3iqu_A 155 AYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAM 207 (236)
T ss_dssp HHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 99999999988888899988777777777766 56999999999888876443
No 304
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=57.74 E-value=47 Score=25.02 Aligned_cols=55 Identities=16% Similarity=0.183 Sum_probs=38.0
Q ss_pred HHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHH
Q 010446 126 KSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSG 190 (510)
Q Consensus 126 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 190 (510)
..+..+|+-++-.+.+...+ .+.+..+..+..+|.+|...|+..+|.+++.+|-+
T Consensus 99 d~lv~~~KkDqLdki~~~~l----------~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 99 DILVIQGKRDKLEEIGREIL----------KNNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp HHHHHTTCHHHHHHHHHHHC------------CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhccHhHHHHHHHHHh----------ccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 44456666555444443322 12445578899999999999999999999988765
No 305
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=57.38 E-value=53 Score=27.07 Aligned_cols=83 Identities=13% Similarity=0.069 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhc
Q 010446 349 VELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRS 428 (510)
Q Consensus 349 ~~~~~~al~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~ 428 (510)
..++++++..+...... .+++....+|...+.. .+++..+|...... ..-...+..|...|..+...
T Consensus 97 ~~lLErc~~~F~~~~rY-knD~RyLklWl~Ya~~------~~~p~~if~~L~~~------~IG~~~AlfYe~wA~~lE~~ 163 (223)
T 4aez_C 97 VTLLERCTREFVRNPLY-KDDVRYLRIWMQYVNY------IDEPVELFSFLAHH------HIGQESSIFYEEYANYFESR 163 (223)
T ss_dssp HHHHHHHHHHTTTCGGG-TTCHHHHHHHHHHHTT------CSCHHHHHHHHHHT------TCSTTBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccccc-cCCHHHHHHHHHHHHc------cCCHHHHHHHHHHC------CcchhHHHHHHHHHHHHHHc
Confidence 46777887776654222 3455556666666653 24566666654331 12334567788899999999
Q ss_pred cCHHHHHHHHHHHHHH
Q 010446 429 KNFVEAERLLRICLDI 444 (510)
Q Consensus 429 g~~~~A~~~~~~al~~ 444 (510)
|++.+|...|+.+++.
T Consensus 164 g~~~~A~~Vy~~Gi~~ 179 (223)
T 4aez_C 164 GLFQKADEVYQKGKRM 179 (223)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc
Confidence 9999999999999883
No 306
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=56.49 E-value=42 Score=22.53 Aligned_cols=27 Identities=44% Similarity=0.529 Sum_probs=21.6
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 010446 335 LAHAKCANGNAEEAVELYKKALRVIKD 361 (510)
Q Consensus 335 la~~~~~~g~~~~A~~~~~~al~~~~~ 361 (510)
.|.-.-..|++++|+.+|..+++.+..
T Consensus 25 ~Ave~D~~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 25 NAVKADKEGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 344456789999999999999988665
No 307
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=55.98 E-value=1.2e+02 Score=27.62 Aligned_cols=54 Identities=19% Similarity=0.191 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Q 010446 391 EGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTK 447 (510)
Q Consensus 391 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 447 (510)
.++.+|.+++...+..+++.|. .-|..+|..+.+.+++.+|+..+.++-...+.
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~Hv---YPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~ 350 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDEHI---YPYMYLAGYHCRNRNVREALQAWADTATVIQD 350 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhccCCc---cceeecchhhhhcchHHHHHHHHHHHHHHHHH
Confidence 4889999999999988766553 34667888999999999999999988876654
No 308
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=55.35 E-value=72 Score=29.80 Aligned_cols=70 Identities=7% Similarity=0.087 Sum_probs=53.0
Q ss_pred HHHHHHHHHhhCChHHHHHHHHHHHHhhh--hcC-CCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHH-HH
Q 010446 165 LDIIALGYVYIGDLKFVQSLLDMMSGIVD--SLK-DDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINV-LE 234 (510)
Q Consensus 165 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~--~~~-~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-~~ 234 (510)
...+-.+|++.|+..-+..+++....... .+. -...+....++.+|.++...++|.+|.+.+..|+.. +.
T Consensus 179 ~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp 252 (455)
T 3t5v_B 179 VNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLN 252 (455)
T ss_dssp HHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCC
Confidence 34566889999999999999876554321 010 122356677889999999999999999999999987 54
No 309
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=54.22 E-value=55 Score=24.66 Aligned_cols=53 Identities=15% Similarity=0.180 Sum_probs=37.3
Q ss_pred HHhccCHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 010446 425 YSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALY 485 (510)
Q Consensus 425 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 485 (510)
...+|+-++=.+.+...+. +.+.....+..+|.+|.+.|+..+|.+++.+|-+
T Consensus 101 lv~~~KkDqLdki~~~~l~--------n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 101 LVIQGKRDKLEEIGREILK--------NNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp HHHTTCHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhccHhHHHHHHHHHhc--------cCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 3456666655555444322 3344456778999999999999999999999876
No 310
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=54.08 E-value=1.3e+02 Score=27.44 Aligned_cols=70 Identities=19% Similarity=0.187 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Q 010446 375 MRIDLAELLHIV--GRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTK 447 (510)
Q Consensus 375 ~~~~la~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 447 (510)
++.+||++-.-. .....++.+|++|+...+..+.+.| ..-|..+|..+.+.+++.+|+..+.++-.....
T Consensus 264 ALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~h---vYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~ 335 (489)
T 4gq4_A 264 ALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEH---IYPYMYLAGYHCRNRNVREALQAWADTATVIQD 335 (489)
T ss_dssp HHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCC---SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred hhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCc---ccceeecchHHHHhhhHHHHHHHhhhhhhhhhh
Confidence 334555544322 1223577899999999998876655 345667899999999999999999998776554
No 311
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=52.86 E-value=35 Score=31.88 Aligned_cols=69 Identities=7% Similarity=-0.030 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHh--hC-CCChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Q 010446 375 MRIDLAELLHIVGRGQEGRELLEECLLITEKY--KG-KEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDI 444 (510)
Q Consensus 375 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~-~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 444 (510)
..+.+-.+|.+.|+..-+...++..-. ..-. .. -.....+..++.+|.++...++|.+|.+.+..|+..
T Consensus 178 l~n~L~kiYFkl~~~~lckni~k~i~~-~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~ 249 (455)
T 3t5v_B 178 LVNKLNNIYFRIESPQLCSNIFKNFQP-KSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQS 249 (455)
T ss_dssp HHHHHHHHHHHSSCCTTHHHHHHTHHH-HCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhcc-CCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 445677899999999999888754332 2110 00 012245677888999999999999999999999987
No 312
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=52.10 E-value=54 Score=34.27 Aligned_cols=71 Identities=14% Similarity=0.039 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhc----------------CCCchHHHHHHHHHHHHHHhhhcHHHHHHH
Q 010446 162 VAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSL----------------KDDEPLLDAILLHMGSMYSTLENYEKSMLV 225 (510)
Q Consensus 162 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 225 (510)
+..-+.+|.+|...|++++|..+|+++-.-.... .+........|..+..++...+-++.++..
T Consensus 840 ~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~f 919 (950)
T 4gq2_M 840 PIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEF 919 (950)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHH
Confidence 4445889999999999999999998764321100 000111223455666677777777777777
Q ss_pred HHHHHHH
Q 010446 226 YQRVINV 232 (510)
Q Consensus 226 ~~~al~~ 232 (510)
.+.|++.
T Consensus 920 A~lAI~~ 926 (950)
T 4gq2_M 920 SLLADAS 926 (950)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 7777654
No 313
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=51.24 E-value=52 Score=22.04 Aligned_cols=26 Identities=35% Similarity=0.553 Sum_probs=21.0
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHh
Q 010446 336 AHAKCANGNAEEAVELYKKALRVIKD 361 (510)
Q Consensus 336 a~~~~~~g~~~~A~~~~~~al~~~~~ 361 (510)
|.-.-..|++++|+.+|..+++.+..
T Consensus 18 Ave~D~~g~y~eAl~lY~~aie~l~~ 43 (83)
T 2v6y_A 18 AVKADKEGKVEDAITYYKKAIEVLSQ 43 (83)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 34456789999999999999988665
No 314
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=48.69 E-value=74 Score=23.04 Aligned_cols=28 Identities=25% Similarity=0.326 Sum_probs=22.5
Q ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHHh
Q 010446 422 AASYSRSKNFVEAERLLRICLDIMTKTV 449 (510)
Q Consensus 422 a~~~~~~g~~~~A~~~~~~al~~~~~~~ 449 (510)
|.-.-..|+|++|+.+|..+++.+...+
T Consensus 25 Ave~D~ag~y~eAl~lY~~Aie~l~~al 52 (117)
T 2cpt_A 25 AAQEDKAGNYEEALQLYQHAVQYFLHVV 52 (117)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 3344566999999999999999887765
No 315
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=46.96 E-value=1.7e+02 Score=26.70 Aligned_cols=73 Identities=22% Similarity=0.254 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHcCC--hHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Q 010446 287 VLPLFSLGSLFIKEGK--AVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDS 362 (510)
Q Consensus 287 ~~~~~~la~~~~~~g~--~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 362 (510)
..++.+||.+-...-- -..++.+|.+++...+..+++.|. .-|..+|-.+++.+++.+|+..+-++-.....-
T Consensus 277 PmALgnLgDLEe~~pt~gr~~~~~L~~~AI~sa~~~Y~n~Hv---YPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~Y 351 (550)
T 3u84_A 277 PMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHI---YPYMYLAGYHCRNRNVREALQAWADTATVIQDY 351 (550)
T ss_dssp HHHHHHHHHHHHHSCCTTCCCHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS
T ss_pred chhhcchhhHhhcCCCCCCCCHHHHHHHHHHHHHHHhccCCc---cceeecchhhhhcchHHHHHHHHHHHHHHHHHc
Confidence 4455555554432211 124889999999999998876553 456678889999999999999999988876653
No 316
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=46.40 E-value=18 Score=23.61 Aligned_cols=27 Identities=15% Similarity=0.195 Sum_probs=23.0
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHH
Q 010446 461 LHLGITLYHLNRDKEAEKLVLEALYIR 487 (510)
Q Consensus 461 ~~la~~~~~~g~~~~A~~~~~~al~~~ 487 (510)
..+|+.+...|++++|..+|-+|+.++
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc 47 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVC 47 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 567888889999999999999988765
No 317
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=46.34 E-value=1.1e+02 Score=24.11 Aligned_cols=125 Identities=10% Similarity=-0.045 Sum_probs=81.0
Q ss_pred HHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHH
Q 010446 125 VKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDA 204 (510)
Q Consensus 125 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 204 (510)
+...++-.+|+.++-+..- + .+..++--..++..++..|.|..++-.+... ....
T Consensus 9 I~Ks~kY~dYdt~~fLsa~-L------------~~~~~eY~lL~~I~LyyngEY~R~Lf~L~~l------------NT~T 63 (242)
T 3kae_A 9 ICKSIRYRDYETAIFLAAC-L------------LPCKPEYRMLMSIVLYLNGEYTRALFHLHKL------------NTCT 63 (242)
T ss_dssp HHHHHHTTCHHHHHHHHHH-H------------C----CTHHHHHHHHHHTTCHHHHHHHHHTC------------CBHH
T ss_pred HHHHhhcccccHHHHHHHH-H------------ccCChHHHhhhhhhhhhcchHhHHHHHHHhc------------chHH
Confidence 3444566777776643221 1 2222233456677788899999988776431 1233
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHHHH----------HHhcCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Q 010446 205 ILLHMGSMYSTLENYEKSMLVYQRVINVL----------ESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITI 274 (510)
Q Consensus 205 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~----------~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 274 (510)
+.+.-+.||....+|..|+..++..+.-- -+.+-.+..+.--.+..+|.++...|+-++|+.++......
T Consensus 64 s~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~ 143 (242)
T 3kae_A 64 SKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGK 143 (242)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCC
Confidence 45677889999999999999999887321 11111122233345678899999999999999999887654
No 318
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=45.86 E-value=58 Score=21.21 Aligned_cols=28 Identities=25% Similarity=0.304 Sum_probs=23.8
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 010446 332 MCSLAHAKCANGNAEEAVELYKKALRVI 359 (510)
Q Consensus 332 ~~~la~~~~~~g~~~~A~~~~~~al~~~ 359 (510)
-..+|..+...|++++|..+|-+|+..+
T Consensus 20 eV~~GE~L~~~g~~~~~~~hf~nAl~Vc 47 (73)
T 3ax2_A 20 EIQLGEELLAQGDYEKGVDHLTNAIAVC 47 (73)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 3567888999999999999999998874
No 319
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=45.32 E-value=1.2e+02 Score=31.79 Aligned_cols=71 Identities=3% Similarity=-0.149 Sum_probs=48.3
Q ss_pred HHHHHHHHHcCChhHHHHHHHHHHH-------------HHHHHHhcCCCChhHHHHHHHHHHHHHhhCChHHHHHHHHHH
Q 010446 122 FNEVKSMIMMGNKNDAIDLLQANYE-------------AVKEQINAGNKGIEEVAILDIIALGYVYIGDLKFVQSLLDMM 188 (510)
Q Consensus 122 ~~~~~~~~~~g~~~~A~~~~~~al~-------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 188 (510)
+-.|+.+...|++++|..+|++|-. .....+............|..+..++...+-++-++.+.+.|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 6689999999999999999997631 111111112222233345667777788888888888888888
Q ss_pred HHhh
Q 010446 189 SGIV 192 (510)
Q Consensus 189 ~~~~ 192 (510)
+...
T Consensus 924 I~~~ 927 (950)
T 4gq2_M 924 DASK 927 (950)
T ss_dssp HHTC
T ss_pred Hhhc
Confidence 8765
No 320
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=44.65 E-value=52 Score=22.71 Aligned_cols=65 Identities=18% Similarity=0.130 Sum_probs=43.8
Q ss_pred HHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCCh----hHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCC
Q 010446 123 NEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKGI----EEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKD 197 (510)
Q Consensus 123 ~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 197 (510)
..+..+++.|+|-+|-+.++..-.. .+ .+ -..-+....|......|+. |...+.++.......++
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~-------~~-~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~~~~~ 74 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLK-------AT-GEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLEGLPC 74 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH-------CC-HHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhh-------CC-CchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHhCCC
Confidence 3566778889999999999887654 11 11 1222333445556678888 99999999887765443
No 321
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=44.40 E-value=31 Score=23.88 Aligned_cols=27 Identities=15% Similarity=0.195 Sum_probs=22.8
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHH
Q 010446 461 LHLGITLYHLNRDKEAEKLVLEALYIR 487 (510)
Q Consensus 461 ~~la~~~~~~g~~~~A~~~~~~al~~~ 487 (510)
..+|..+...|+++.|..+|-+|+.++
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc 50 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVC 50 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 467888888999999999888888776
No 322
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=44.27 E-value=77 Score=24.52 Aligned_cols=68 Identities=4% Similarity=-0.048 Sum_probs=46.5
Q ss_pred HHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCC--chHHHH--HH-HHHHHHHHhhhcHHHHHHHHHHHHHHHHHh
Q 010446 166 DIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDD--EPLLDA--IL-LHMGSMYSTLENYEKSMLVYQRVINVLESR 236 (510)
Q Consensus 166 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~--~~~~~~--~~-~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 236 (510)
+.-|..++..|+|=+|-+.++.+-.... .. ...... +. ...|......|+...|..++.+++......
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~---~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~~ 108 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYG---RGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRGV 108 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTC---SSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcC---CCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 4455667778999999999988765431 11 122222 23 334556677899999999999999876543
No 323
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=43.78 E-value=1.9e+02 Score=26.33 Aligned_cols=33 Identities=18% Similarity=0.039 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhc
Q 010446 459 PMLHLGITLYHLNRDKEAEKLVLEALYIREIAF 491 (510)
Q Consensus 459 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 491 (510)
+++..|......+++-+|+..++.|.+...+..
T Consensus 259 A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~ 291 (392)
T 1zb1_A 259 SAYYHGLHLEEENRVGEAIAFLDFSMQQLISSL 291 (392)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 455567777888999999999999998877654
No 324
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=43.75 E-value=2.4e+02 Score=27.58 Aligned_cols=170 Identities=9% Similarity=0.036 Sum_probs=98.9
Q ss_pred HHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHH
Q 010446 167 IIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVT 246 (510)
Q Consensus 167 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 246 (510)
..+.......+.+.|...+....... .-+..........++.-....+...++..++.+... ...+.....
T Consensus 219 ~~~~~rlar~d~~~A~~~~~~~~~~~---~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~e 289 (618)
T 1qsa_A 219 AVAFASVARQDAENARLMIPSLAQAQ---QLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIM------RSQSTSLIE 289 (618)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHH------TCCCHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHhhhhcc---CCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccc------cCCChHHHH
Confidence 33444455568888888887654322 122233344445566556666646677777776432 122223322
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHH-------HHH
Q 010446 247 SLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKI-------YTK 319 (510)
Q Consensus 247 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~-------~~~ 319 (510)
...+. ....|+++.|..++.+.-. .........+.+|..+...|+.++|..+|+++..- ...
T Consensus 290 --~~~r~-Alr~~d~~~a~~~~~~l~~--------~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~~~~fYg~lAa~ 358 (618)
T 1qsa_A 290 --RRVRM-ALGTGDRRGLNTWLARLPM--------EAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQRGFYPMVAAQ 358 (618)
T ss_dssp --HHHHH-HHHHTCHHHHHHHHHHSCT--------TGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSHHHHHHHH
T ss_pred --HHHHH-HHHCCCHHHHHHHHHHccc--------cccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhcCCChHHHHHHH
Confidence 22233 3466999999998865422 22345667889999999999999999999887541 111
Q ss_pred HcCCCC--------h----H-HHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 010446 320 VYGEND--------G----R-VGMAMCSLAHAKCANGNAEEAVELYKKAL 356 (510)
Q Consensus 320 ~~~~~~--------~----~-~~~~~~~la~~~~~~g~~~~A~~~~~~al 356 (510)
..|... + . ........+..+...|....|...+....
T Consensus 359 ~Lg~~~~~~~~~~~~~~~~~~~~~~~~~r~~~L~~~g~~~~a~~ew~~~~ 408 (618)
T 1qsa_A 359 RIGEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLV 408 (618)
T ss_dssp HTTCCCCCCCCCCCSCCCCHHHHSHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HcCCCCCCCCCCCChhHHhhhccChHHHHHHHHHHCCChhhHHHHHHHHH
Confidence 112110 0 0 11122344566778898888887766654
No 325
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=41.84 E-value=78 Score=21.35 Aligned_cols=48 Identities=6% Similarity=0.010 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchHHHHHH-HHHHHH
Q 010446 160 EEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPLLDAIL-LHMGSM 212 (510)
Q Consensus 160 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~ 212 (510)
..++.+..-|.-++..|+|.+|..+|+++.... +.|.+-.++ +.++.|
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t-----en~~i~ki~~fyl~ec 99 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLS-----DNEEIKKIASFYLEEC 99 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccc-----cCHHHHHHHHHHHHHH
Confidence 456667777888899999999999999988764 336555444 444444
No 326
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=41.13 E-value=1.7e+02 Score=27.32 Aligned_cols=40 Identities=13% Similarity=0.052 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhcc
Q 010446 390 QEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSK 429 (510)
Q Consensus 390 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 429 (510)
++|++.|++|+...++....+.+.....+..++..|...|
T Consensus 449 ~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aG 488 (526)
T 2wb7_A 449 QGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAG 488 (526)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhcc
Confidence 4677778888887777766667776666666665544443
No 327
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=37.97 E-value=2.6e+02 Score=26.22 Aligned_cols=68 Identities=19% Similarity=0.200 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH
Q 010446 262 KKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA 341 (510)
Q Consensus 262 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~ 341 (510)
++|+++|++|++.+++....+.+.....+..++..| +-|-.+|.+|-+ ...
T Consensus 449 ~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~y------E~aGDyy~~AA~-----------------------k~~ 499 (526)
T 2wb7_A 449 QGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAKKH------EMAGDYYVNAAR-----------------------KAL 499 (526)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHH------HHHHHHHHHHHH-----------------------HHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhhhh------hhccHHHHHHHH-----------------------HHh
Confidence 356667777777777766666666666666555543 333344444433 223
Q ss_pred CCCHHHHHHHHHHHHHH
Q 010446 342 NGNAEEAVELYKKALRV 358 (510)
Q Consensus 342 ~g~~~~A~~~~~~al~~ 358 (510)
.|..++|...-.++-++
T Consensus 500 yG~~eqAe~l~~~A~~~ 516 (526)
T 2wb7_A 500 NGDLEQAKIDAEKAKEY 516 (526)
T ss_dssp TTCHHHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHH
Confidence 46666666666665554
No 328
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=37.55 E-value=76 Score=25.74 Aligned_cols=59 Identities=7% Similarity=-0.078 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHhhcCCH
Q 010446 200 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRA 261 (510)
Q Consensus 200 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 261 (510)
.+.....+.+|.++...++|.+|.+.+.+|+..+.+. .......++..+.-+-.-.|+.
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~---~~~~k~~IL~yLIp~~Ll~G~i 69 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS---SQKNKRMILIYLLPVKMLLGHM 69 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT---CHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh---HHHHHHHHHHHHHHHHHHcCCC
Confidence 3456668899999999999999999999998874321 1122333444444444445654
No 329
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=35.05 E-value=1.8e+02 Score=26.94 Aligned_cols=33 Identities=9% Similarity=-0.057 Sum_probs=24.8
Q ss_pred ChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 010446 369 DSIMENMRIDLAELLHIVGRGQEGRELLEECLL 401 (510)
Q Consensus 369 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 401 (510)
+......+..|+..+...|++.||--++..+..
T Consensus 7 pdl~~~wl~~La~~h~~~~n~~EAa~cl~~~aa 39 (428)
T 2wm9_A 7 PELRKTWLDSMARIHVKNGDLSEAAMCYVHVTA 39 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 334455668899999999999999888765444
No 330
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=33.85 E-value=94 Score=21.41 Aligned_cols=64 Identities=19% Similarity=0.084 Sum_probs=42.2
Q ss_pred HHHHHHhhCChHHHHHHHHHHHHhhhhcCCCchH--HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHh
Q 010446 168 IALGYVYIGDLKFVQSLLDMMSGIVDSLKDDEPL--LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESR 236 (510)
Q Consensus 168 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 236 (510)
.|..++..|+|=+|-+.++..-.... +.... ..-+....|......|+. |...+.+++......
T Consensus 7 ~~~~lfn~g~~~eaHEvlE~~W~~~~---~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~~~ 72 (94)
T 2cwy_A 7 EVLGLWRAGRYYEVHEVLEPYWLKAT---GEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLEGL 72 (94)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCChHHHHHHHHHHHhhCC---CchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHhC
Confidence 45566778999999999988765431 11112 222333445556677888 999999999877554
No 331
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=33.42 E-value=69 Score=29.97 Aligned_cols=35 Identities=9% Similarity=0.059 Sum_probs=29.8
Q ss_pred CcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q 010446 283 SADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIY 317 (510)
Q Consensus 283 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 317 (510)
......++..+|++|...|++++|....++++...
T Consensus 186 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 220 (454)
T 3myv_A 186 RMNKYAARALLARIYLYHDDNRKAFDLADQLIKDA 220 (454)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhCC
Confidence 44556778889999999999999999999998753
No 332
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=32.75 E-value=1.7e+02 Score=22.60 Aligned_cols=69 Identities=10% Similarity=-0.004 Sum_probs=47.4
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHhcCCCC---h--hHHHHH-HHHHHHHHhhCChHHHHHHHHHHHHhhhh
Q 010446 121 LFNEVKSMIMMGNKNDAIDLLQANYEAVKEQINAGNKG---I--EEVAIL-DIIALGYVYIGDLKFVQSLLDMMSGIVDS 194 (510)
Q Consensus 121 l~~~~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~---~--~~~~~~-~~l~~~~~~~g~~~~A~~~~~~~~~~~~~ 194 (510)
-+..+..+++.|+|-+|-+.++..... .... . ....+. ...|..+...|+..-|..++.+++.....
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~~-------~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~ 107 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWYN-------YGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRG 107 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTT-------TCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHh-------cCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 455777888899999999988876543 1111 1 112233 33455567789999999999999887755
Q ss_pred cC
Q 010446 195 LK 196 (510)
Q Consensus 195 ~~ 196 (510)
..
T Consensus 108 ~~ 109 (161)
T 2ijq_A 108 VP 109 (161)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 333
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=31.80 E-value=65 Score=22.29 Aligned_cols=27 Identities=7% Similarity=0.172 Sum_probs=22.5
Q ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHH
Q 010446 419 LNLAASYSRSKNFVEAERLLRICLDIM 445 (510)
Q Consensus 419 ~~la~~~~~~g~~~~A~~~~~~al~~~ 445 (510)
..+|..+...|+++.|+.+|-+|+.++
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc 50 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVC 50 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 467888888999999999888887765
No 334
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=31.54 E-value=1.8e+02 Score=23.54 Aligned_cols=35 Identities=11% Similarity=0.095 Sum_probs=30.1
Q ss_pred hhHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhhh
Q 010446 159 IEEVAILDIIALGYVYIGDLKFVQSLLDMMSGIVD 193 (510)
Q Consensus 159 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~ 193 (510)
.......+.+|..++..++|.+|...+..|.....
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~ 45 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCH 45 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCC
Confidence 44566788999999999999999999999988763
No 335
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=30.67 E-value=76 Score=29.75 Aligned_cols=35 Identities=11% Similarity=0.133 Sum_probs=29.8
Q ss_pred CcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q 010446 283 SADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIY 317 (510)
Q Consensus 283 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 317 (510)
......++..+|++|...|++++|....++++...
T Consensus 192 r~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~~ 226 (461)
T 3kez_A 192 KVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKGA 226 (461)
T ss_dssp SCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 45556788889999999999999999999998753
No 336
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=30.33 E-value=77 Score=29.64 Aligned_cols=34 Identities=15% Similarity=-0.082 Sum_probs=29.4
Q ss_pred ChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Q 010446 411 HPSFVTHLLNLAASYSRSKNFVEAERLLRICLDI 444 (510)
Q Consensus 411 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 444 (510)
......++..+|.+|...|+|++|..+.++++..
T Consensus 186 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 186 RMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 4556667888999999999999999999999874
No 337
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=29.82 E-value=2.2e+02 Score=22.97 Aligned_cols=86 Identities=6% Similarity=0.016 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHhc-CCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHcCC
Q 010446 224 LVYQRVINVLESRY-GKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGK 302 (510)
Q Consensus 224 ~~~~~al~~~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 302 (510)
..+++++..+.... -.+++.....+...+..+ ..+...++.+.|.-.... .. ....+..|...|..+...|+
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~---~I---G~~~AlfYe~wA~~lE~~g~ 130 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNK---GI---GTKLSLFYEEFSKLLENAQF 130 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHH---TS---STTBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHC---CC---cHHHHHHHHHHHHHHHHcCC
Confidence 56777777654321 134567777777777765 344466788888766543 11 23457778889999999999
Q ss_pred hHHHHHHHHHHHHH
Q 010446 303 AVDAESVFSRILKI 316 (510)
Q Consensus 303 ~~~A~~~~~~al~~ 316 (510)
+.+|...|+..++.
T Consensus 131 ~~~A~~Vy~~GI~~ 144 (202)
T 3esl_A 131 FLEAKVLLELGAEN 144 (202)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999999874
No 338
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=29.50 E-value=3.2e+02 Score=24.78 Aligned_cols=31 Identities=10% Similarity=0.096 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Q 010446 290 LFSLGSLFIKEGKAVDAESVFSRILKIYTKV 320 (510)
Q Consensus 290 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 320 (510)
++..|......+++.+|+..++.|.+..+..
T Consensus 260 ~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a 290 (392)
T 1zb1_A 260 AYYHGLHLEEENRVGEAIAFLDFSMQQLISS 290 (392)
T ss_dssp HHHHHHHHHHTTCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 3344555566667777777777766655443
No 339
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=28.43 E-value=83 Score=29.49 Aligned_cols=35 Identities=11% Similarity=0.032 Sum_probs=29.7
Q ss_pred CChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Q 010446 410 EHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDI 444 (510)
Q Consensus 410 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 444 (510)
.......++..+|.+|.-.|+|++|..+.++++..
T Consensus 191 gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 191 GKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp TSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 34556677888999999999999999999999874
No 340
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=26.64 E-value=1e+02 Score=23.40 Aligned_cols=41 Identities=17% Similarity=0.307 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCChhh
Q 010446 415 VTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSI 456 (510)
Q Consensus 415 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 456 (510)
+..+...|.+|...|+.+.|.-+|-+...+.-..+ +.||+.
T Consensus 40 a~~llr~A~~y~~egd~e~AYily~R~~~L~~e~I-pkHpdy 80 (146)
T 2xze_A 40 GVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKL-PKHRDY 80 (146)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTG-GGSTTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHc-ccCccc
Confidence 34556779999999999999999999988886443 345554
No 341
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=26.42 E-value=3.3e+02 Score=23.88 Aligned_cols=31 Identities=13% Similarity=0.268 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHHHHH
Q 010446 118 LLELFNEVKSMIMMGNKNDAIDLLQANYEAV 148 (510)
Q Consensus 118 ~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~ 148 (510)
+...++.|..+...|++.+|+..|+..+..+
T Consensus 102 l~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i 132 (320)
T 3mkr_B 102 LIQRLQLCYQLTTVGKFEEAVEKFRSILLSV 132 (320)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 3345678889999999999999999988764
No 342
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=26.41 E-value=1.5e+02 Score=20.00 Aligned_cols=50 Identities=10% Similarity=0.157 Sum_probs=34.0
Q ss_pred hhhhhhhhhhcccccchHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 010446 96 RSKTLHDHSSNLWDGMNDFERQLLELFNEVKSMIMMGNKNDAIDLLQANY 145 (510)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al 145 (510)
++..+++.+........+....+...+..+..+...||+..|+..+.=+-
T Consensus 13 kYi~~l~eaL~~i~~a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~ 62 (86)
T 2oo2_A 13 KWLERIEERVKEIEGDEGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAW 62 (86)
T ss_dssp HHHHHHHHHGGGEEECHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44444455544444455666667778888999999999999888766543
No 343
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=24.92 E-value=1e+02 Score=23.35 Aligned_cols=39 Identities=5% Similarity=-0.096 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhcCCCCcc
Q 010446 458 FPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLP 497 (510)
Q Consensus 458 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 497 (510)
..+...|.+|...|+.+.|.-+|-+...+.-..+. .||+
T Consensus 41 ~~llr~A~~y~~egd~e~AYily~R~~~L~~e~Ip-kHpd 79 (146)
T 2xze_A 41 VEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLP-KHRD 79 (146)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGG-GSTT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHcc-cCcc
Confidence 34567789999999999999999999999864333 3444
No 344
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=23.73 E-value=88 Score=29.48 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=29.1
Q ss_pred CcchHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 010446 283 SADLVLPLFSLGSLFIKEGKAVDAESVFSRILKI 316 (510)
Q Consensus 283 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 316 (510)
......++..+|++|...|++++|....++++..
T Consensus 198 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 198 YINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 4455677888999999999999999999999874
No 345
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=21.55 E-value=2.7e+02 Score=21.21 Aligned_cols=83 Identities=7% Similarity=0.056 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHh-cCCCChhHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHc
Q 010446 222 SMLVYQRVINVLESR-YGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKE 300 (510)
Q Consensus 222 A~~~~~~al~~~~~~-~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~ 300 (510)
=..++++++..+... .-.+++.....+...+... . ++.+.|.-.... . -....+..|...|..+...
T Consensus 47 l~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~---~---dp~~if~~L~~~---~---IG~~~AlfYe~wA~~lE~~ 114 (152)
T 4a1g_A 47 LITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEYN---S---DLHQFFEFLYNH---G---IGTLSSPLYIAWAGHLEAQ 114 (152)
T ss_dssp HHHHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTTB---S---CHHHHHHHHHTT---T---TTTTBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcccccccCCHHHHHHHHHHHHhc---C---CHHHHHHHHHHC---C---CcHHHHHHHHHHHHHHHHc
Confidence 345566666555321 1134566666666666542 2 255555544321 1 1234567788899999999
Q ss_pred CChHHHHHHHHHHHHH
Q 010446 301 GKAVDAESVFSRILKI 316 (510)
Q Consensus 301 g~~~~A~~~~~~al~~ 316 (510)
|++.+|...|+..++.
T Consensus 115 g~~~~A~~Vy~~Gi~~ 130 (152)
T 4a1g_A 115 GELQHASAVLQRGIQN 130 (152)
T ss_dssp TCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHc
Confidence 9999999999999874
No 346
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=21.44 E-value=96 Score=29.21 Aligned_cols=34 Identities=9% Similarity=-0.009 Sum_probs=29.0
Q ss_pred ChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Q 010446 411 HPSFVTHLLNLAASYSRSKNFVEAERLLRICLDI 444 (510)
Q Consensus 411 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 444 (510)
......++..+|.+|.-.|+|++|..+.++++..
T Consensus 198 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 198 YINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 4455667888999999999999999999998874
No 347
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=20.85 E-value=1.6e+02 Score=27.52 Aligned_cols=33 Identities=9% Similarity=-0.000 Sum_probs=28.3
Q ss_pred CcchHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 010446 283 SADLVLPLFSLGSLFIKEGKAVDAESVFSRILK 315 (510)
Q Consensus 283 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 315 (510)
......++..+|++|...|++++|..+.++++.
T Consensus 187 r~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 187 KPNTDVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred ccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 345567888899999999999999999998875
Done!