BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010447
(510 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum
tuberosum GN=MPP PE=1 SV=1
Length = 504
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/510 (72%), Positives = 435/510 (85%), Gaps = 6/510 (1%)
Query: 1 MYRNAASRLRALKGHVRCRVPSATRFASSSAVASTSSSSGGLFSWLTGERSSSSPSLDFP 60
MYR A+SRL +LK RV TRF+SS+AVA+ SGGLFSW+TG+ SSS LDFP
Sbjct: 1 MYRCASSRLSSLKARQGNRV--LTRFSSSAAVAT--KPSGGLFSWITGDTSSSVTPLDFP 56
Query: 61 LPGVSLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGT 120
L V L P LPDYVEP KT+I+TL NG+K+ASE SV+P ASI LYV CGSIYE+P S+G
Sbjct: 57 LNDVKLSPPLPDYVEPAKTQITTLANGLKVASEASVNPAASIGLYVDCGSIYETPASYGA 116
Query: 121 THLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLID 180
THLLERMAF+ST NRSHLRIVRE+EAIGGNV ASASRE M Y++DALKTYVP+MVE+L D
Sbjct: 117 THLLERMAFKSTLNRSHLRIVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLAD 176
Query: 181 CVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINR 240
CVRNP FLDWEV EQL KVK+EISE S NPQ LLLEA+HSAGY+G N L+A E+ INR
Sbjct: 177 CVRNPAFLDWEVKEQLEKVKAEISEYSKNPQHLLLEAVHSAGYAGPYGNSLMATEATINR 236
Query: 241 LNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDY 300
LNST+LEEFVAENYT PRMVLAASGVEH++ + VAEPLLSDLP + EEPK VY GGDY
Sbjct: 237 LNSTVLEEFVAENYTAPRMVLAASGVEHEEFLKVAEPLLSDLPKVATIEEPKPVYVGGDY 296
Query: 301 RCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYR 360
RCQAD+ ++THF LAFE+PGGW +K++MTLTVLQML+GGGGSFSAGGPGKGMYSRLY
Sbjct: 297 RCQADA--EMTHFALAFEVPGGWMSEKESMTLTVLQMLMGGGGSFSAGGPGKGMYSRLYL 354
Query: 361 RVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQ 420
RVLN++PQ+ +FSAFS+IYN++G+FGIQGTT SDF +A+D+A +ELI+VA P EVDQVQ
Sbjct: 355 RVLNQYPQIHAFSAFSSIYNNTGLFGIQGTTSSDFGPQAVDVAVKELIAVANPSEVDQVQ 414
Query: 421 LDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQK 480
L+RAKQ+TKSAILMNLESRMV SEDIGRQ+LTYGER PVEHFLK ++ V+AKDIASV QK
Sbjct: 415 LNRAKQATKSAILMNLESRMVASEDIGRQLLTYGERNPVEHFLKAIDAVSAKDIASVVQK 474
Query: 481 LLSSPLTMASYGDVINVPSYDAVSSKFKSK 510
L+SSPLTMASYGDV+++PSYDAVSS+F+SK
Sbjct: 475 LISSPLTMASYGDVLSLPSYDAVSSRFRSK 504
>sp|Q9ZU25|MPPA1_ARATH Probable mitochondrial-processing peptidase subunit alpha-1
OS=Arabidopsis thaliana GN=At1g51980 PE=1 SV=1
Length = 503
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/508 (65%), Positives = 406/508 (79%), Gaps = 5/508 (0%)
Query: 1 MYRNAASRLRALKGHVRCRVPSATRFASSSAVASTSSSSGGLFSWLTGERSSSSPSLDFP 60
MYR AASR RALKG V R R+ASSSAVA TSSS+ SWL+G ++ SLD P
Sbjct: 1 MYRTAASRARALKG-VLTRSLRPARYASSSAVAETSSSTPAYLSWLSGGSRAALTSLDMP 59
Query: 61 LPGVSLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGT 120
L GVSLPP L D VEP K +I+TLPNG+KIASET+ +P ASI LYV CGSIYE+P G
Sbjct: 60 LQGVSLPPPLADKVEPSKLQITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGA 119
Query: 121 THLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLID 180
THLLERMAF+ST NR+H R+VRE+EAIGGN ASASREQM Y+ DALKTYVPEMVE+LID
Sbjct: 120 THLLERMAFKSTLNRTHFRLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLID 179
Query: 181 CVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINR 240
VRNP FLDWEVNE+L K+K EI+E++ NP LLEAIHSAGYSG LA+PL APESA++R
Sbjct: 180 SVRNPAFLDWEVNEELRKMKVEIAELAKNPMGFLLEAIHSAGYSGPLASPLYAPESALDR 239
Query: 241 LNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDY 300
LN LLEEF+ EN+T RMVLAASGVEH++L+ VAEPL SDLP++ P+ PKS Y GGD+
Sbjct: 240 LNGELLEEFMTENFTAARMVLAASGVEHEELLKVAEPLTSDLPNVPPQLAPKSQYVGGDF 299
Query: 301 RCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYR 360
R +G + THF +AFE+P GW+ +K+A+T TVLQML+GGGGSFSAGGPGKGM+S LYR
Sbjct: 300 RQH--TGGEATHFAVAFEVP-GWNNEKEAVTATVLQMLMGGGGSFSAGGPGKGMHSWLYR 356
Query: 361 RVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQ 420
RVLNE+ +VQS +AF++I+N +G+FGI G + F +KAI+LAA+EL VA G+V+Q
Sbjct: 357 RVLNEYQEVQSCTAFTSIFNDTGLFGIYGCSSPQFAAKAIELAAKELKDVAG-GKVNQAH 415
Query: 421 LDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQK 480
LDRAK +TKSA+LMNLESRM+ +EDIGRQ+LTYGERKPV+ FLK+V+ +T KDIA K
Sbjct: 416 LDRAKAATKSAVLMNLESRMIAAEDIGRQILTYGERKPVDQFLKSVDQLTLKDIADFTSK 475
Query: 481 LLSSPLTMASYGDVINVPSYDAVSSKFK 508
++S PLTM S+GDV+ VPSYD +SSKF+
Sbjct: 476 VISKPLTMGSFGDVLAVPSYDTISSKFR 503
>sp|O04308|MPPA2_ARATH Probable mitochondrial-processing peptidase subunit alpha-2
OS=Arabidopsis thaliana GN=MPPA2 PE=1 SV=1
Length = 499
Score = 591 bits (1524), Expect = e-168, Method: Compositional matrix adjust.
Identities = 328/508 (64%), Positives = 401/508 (78%), Gaps = 9/508 (1%)
Query: 1 MYRNAASRLRALKGHVRCRVPSATRFASSSAVASTSSSSGGLFSWLTGERSSSSPSLDFP 60
MYR AASR +ALKG + A+R+ASSSAVA++SSSS SWL+G SSS PS++ P
Sbjct: 1 MYRTAASRAKALKGILNHNF-RASRYASSSAVATSSSSS----SWLSGGYSSSLPSMNIP 55
Query: 61 LPGVSLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGT 120
L GVSLPP L D+VEP K K +TLPNG+ IA+E S +P ASI LYV CGSIYE+P G
Sbjct: 56 LAGVSLPPPLSDHVEPSKLKTTTLPNGLTIATEMSPNPAASIGLYVDCGSIYETPQFRGA 115
Query: 121 THLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLID 180
THLLERMAF+ST NRSH R+VRE+EAIGGN ASASREQMGY+ DALKTYVPEMVE+LID
Sbjct: 116 THLLERMAFKSTLNRSHFRLVREIEAIGGNTSASASREQMGYTIDALKTYVPEMVEVLID 175
Query: 181 CVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINR 240
VRNP FLDWEVNE+L KVK EI E + NP LLEA+HSAGYSGALANPL APESAI
Sbjct: 176 SVRNPAFLDWEVNEELRKVKVEIGEFATNPMGFLLEAVHSAGYSGALANPLYAPESAITG 235
Query: 241 LNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDY 300
L +LE FV ENYT RMVLAASGV+H++L+ V EPLLSDLP++ EPKS Y GGD+
Sbjct: 236 LTGEVLENFVFENYTASRMVLAASGVDHEELLKVVEPLLSDLPNVPRPAEPKSQYVGGDF 295
Query: 301 RCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYR 360
R +G + THF LAFE+P GW+ +K+A+ TVLQML+GGGGSFSAGGPGKGM+S LY
Sbjct: 296 RQH--TGGEATHFALAFEVP-GWNNEKEAIIATVLQMLMGGGGSFSAGGPGKGMHSWLYL 352
Query: 361 RVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQ 420
R+LN+ Q QS +AF++++N++G+FGI G T +F S+ I+L A E+ +VA G+V+Q
Sbjct: 353 RLLNQHQQFQSCTAFTSVFNNTGLFGIYGCTSPEFASQGIELVASEMNAVAD-GKVNQKH 411
Query: 421 LDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQK 480
LDRAK +TKSAILMNLESRM+ +EDIGRQ+LTYGERKPV+ FLKTV+ +T KDIA K
Sbjct: 412 LDRAKAATKSAILMNLESRMIAAEDIGRQILTYGERKPVDQFLKTVDQLTLKDIADFTSK 471
Query: 481 LLSSPLTMASYGDVINVPSYDAVSSKFK 508
+++ PLTMA++GDV+NVPSYD+VS +F+
Sbjct: 472 VITKPLTMATFGDVLNVPSYDSVSKRFR 499
>sp|P11914|MPPA_YEAST Mitochondrial-processing peptidase subunit alpha OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAS2 PE=1
SV=1
Length = 482
Score = 216 bits (549), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 157/444 (35%), Positives = 246/444 (55%), Gaps = 30/444 (6%)
Query: 80 KISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLR 139
K+S+L NG+K+A+ + +++ LY+ GS +E G TH+L+R+AF+ST +
Sbjct: 20 KLSSLANGLKVATSNTPGHFSALGLYIDAGSRFEGRNLKGCTHILDRLAFKSTEHVEGRA 79
Query: 140 IVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKV 199
+ +E +GGN Q ++SRE + Y V +M++L+ + VR P + E+ EQ
Sbjct: 80 MAETLELLGGNYQCTSSRENLMYQASVFNQDVGKMLQLMSETVRFPKITEQELQEQKLSA 139
Query: 200 KSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPR 258
+ EI EV P+ +L E +H+A YSG L +PL+ P I ++ L ++ + YT
Sbjct: 140 EYEIDEVWMKPELVLPELLHTAAYSGETLGSPLICPRELIPSISKYYLLDYRNKFYTPEN 199
Query: 259 MVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPK-SVYTGGDYRCQADS---GD--QLTH 312
V A GV H++ + + E L D S HP K + YTGG+ C + G+ +L H
Sbjct: 200 TVAAFVGVPHEKALELTEKYLGDWQSTHPPITKKVAQYTGGE-SCIPPAPVFGNLPELFH 258
Query: 313 FVLAFE-LPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQS 371
+ FE LP D L LQ LLGGGGSFSAGGPGKGMYSRLY VLN++ V++
Sbjct: 259 IQIGFEGLP---IDHPDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTHVLNQYYFVEN 315
Query: 372 FSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGE--VDQVQLDRAKQSTK 429
AF++ Y+ SG+FGI + +A+++ A+++ + + + + ++ RAK K
Sbjct: 316 CVAFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLK 375
Query: 430 SAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMA 489
S++LMNLES++V ED+GRQVL +G + PV + +E + DI+ VA+ + + + A
Sbjct: 376 SSLLMNLESKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDDISRVAEMIFTGNVNNA 435
Query: 490 ----------------SYGDVINV 497
S+GDV NV
Sbjct: 436 GNGKGRATVVMQGDRGSFGDVENV 459
>sp|P22695|QCR2_HUMAN Cytochrome b-c1 complex subunit 2, mitochondrial OS=Homo sapiens
GN=UQCRC2 PE=1 SV=3
Length = 453
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 212/426 (49%), Gaps = 17/426 (3%)
Query: 80 KISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLR 139
+ + LPNG+ IAS + SPV+ I L++ GS YE + GTTHLL + +T+ S +
Sbjct: 39 EFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFK 98
Query: 140 IVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKV 199
I R +EA+GG + +A+RE M Y+ + L+ V ++E L++ P F WEV + ++
Sbjct: 99 ITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADLQPQL 158
Query: 200 KSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRM 259
K + + NPQ+ ++E +H+A Y ALANPL P+ I ++ S L FV ++T RM
Sbjct: 159 KIDKAVAFQNPQTHVIENLHAAAYRNALANPLYCPDYRIGKVTSEELHYFVQNHFTSARM 218
Query: 260 VLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLAFEL 319
L GV H L VAE L+ + K+ Y GG+ R Q +GD L H AF
Sbjct: 219 ALIGLGVSHPVLKQVAEQFLNMRGGL-GLSGAKANYRGGEIREQ--NGDSLVH--AAFVA 273
Query: 320 PGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIY 379
+A +VLQ +LG G G S L++ V Q SAF+ Y
Sbjct: 274 ESAVAGSAEANAFSVLQHVLGAGPHVK---RGSNTTSHLHQAVAKATQQPFDVSAFNASY 330
Query: 380 NHSGMFGI----QGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMN 435
+ SG+FGI Q T D + AA + G + + AK K+ LM+
Sbjct: 331 SDSGLFGIYTISQATAAGDVIK-----AAYNQVKTIAQGNLSNTDVQAAKNKLKAGYLMS 385
Query: 436 LESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVI 495
+ES E++G Q L G P L+ ++ V DI + A+K +S +MA+ G++
Sbjct: 386 VESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVANADIINAAKKFVSGQKSMAASGNLG 445
Query: 496 NVPSYD 501
+ P D
Sbjct: 446 HTPFVD 451
>sp|Q10713|MPPA_HUMAN Mitochondrial-processing peptidase subunit alpha OS=Homo sapiens
GN=PMPCA PE=1 SV=2
Length = 525
Score = 209 bits (531), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 244/474 (51%), Gaps = 24/474 (5%)
Query: 57 LDFPLPGVSLPP-SLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESP 115
L PLPGV P + D E +TK++TL NG+++AS+ ++ + + GS YE+
Sbjct: 44 LSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAK 103
Query: 116 ISFGTTHLLERMAFRST-RNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEM 174
G H LE++AF ST R S I+ +E GG SR+ Y+ A + +
Sbjct: 104 YLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTV 163
Query: 175 VELLIDCVRNPVFLDWEVNEQLTKVKSEISEVS--NNPQSLLLEAIHSAGY-SGALANPL 231
V LL D V P D EV V+ E+ +++ +P+ LL E IH A Y +
Sbjct: 164 VALLADVVLQPRLTDEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHR 223
Query: 232 LAPESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEP-LLSDLPSIHPREE 290
P + ++N +L ++ YT RMVLA GVEH+ LV A LL P+ E
Sbjct: 224 FCPTENVAKINREVLHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEA 283
Query: 291 ---PKSV--YTGGDYRCQADSGD---------QLTHFVLAFELPGGWHKDKDAMTLTVLQ 336
+SV YTGG + + D + +LTH ++ E ++D + VL
Sbjct: 284 VDIDRSVAQYTGGIAKLERDMSNVSLGPTPIPELTHIMVGLE--SCSFLEEDFIPFAVLN 341
Query: 337 MLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFV 396
M++GGGGSFSAGGPGKGM+SRLY VLN + + +++ + Y +G+ I + V
Sbjct: 342 MMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQV 401
Query: 397 SKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGER 456
+ +++ +E I + G VD V+L+RAK S ++MNLESR V+ ED+GRQVL R
Sbjct: 402 REMVEIITKEFILMG--GTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSR 459
Query: 457 KPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAVSSKFKSK 510
K + V +D+ VA K+L +A+ GD+ ++P+Y+ + + SK
Sbjct: 460 KLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSK 513
>sp|Q5R513|MPPA_PONAB Mitochondrial-processing peptidase subunit alpha OS=Pongo abelii
GN=PMPCA PE=2 SV=2
Length = 525
Score = 208 bits (530), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 241/474 (50%), Gaps = 24/474 (5%)
Query: 57 LDFPLPGVSLPP-SLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESP 115
L PLPGV P + D E +TK++TL NG+++AS+ ++ + + GS YE+
Sbjct: 44 LSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAK 103
Query: 116 ISFGTTHLLERMAFRST-RNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEM 174
G H LE++AF ST R S I+ +E GG SR+ Y+ A + +
Sbjct: 104 YLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTV 163
Query: 175 VELLIDCVRNPVFLDWEVNEQLTKVKSEISEVS--NNPQSLLLEAIHSAGY-SGALANPL 231
V LL D V P D EV V+ E+ +++ +P+ LL E IH A Y +
Sbjct: 164 VGLLADVVLQPRLTDEEVEMTRMTVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHR 223
Query: 232 LAPESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEP 291
P I ++N +L ++ YT RMVLA GVEH+ LV A L + E
Sbjct: 224 FCPTENIAKINREVLHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGIQPAWGSAEA 283
Query: 292 KSV------YTGGDYRCQADSGD---------QLTHFVLAFELPGGWHKDKDAMTLTVLQ 336
+ YTGG + + D + +LTH ++ E ++D + VL
Sbjct: 284 VDIDRSVAQYTGGIAKRERDMSNVSLGPTPIPELTHIMVGLE--SCSFLEEDFIPFAVLN 341
Query: 337 MLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFV 396
M++GGGGSFSAGGPGKGM+SRLY VLN + + +++ + Y +G+ I + V
Sbjct: 342 MMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQV 401
Query: 397 SKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGER 456
+ +++ +E I ++ G VD V+L+RAK S ++MNLESR V+ ED+GRQVL R
Sbjct: 402 REMVEIITKEFILMS--GTVDAVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSR 459
Query: 457 KPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAVSSKFKSK 510
K + V +D+ VA K+L +A+ GD+ ++P+Y+ + + SK
Sbjct: 460 KLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSK 513
>sp|P97997|MPPA_BLAEM Mitochondrial-processing peptidase subunit alpha OS=Blastocladiella
emersonii PE=3 SV=1
Length = 474
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/431 (33%), Positives = 237/431 (54%), Gaps = 23/431 (5%)
Query: 79 TKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
T ++ LP+G+++A+ S S A++ +YV G IYE+ I G +H + +AF+ST +
Sbjct: 15 TCMTRLPSGIRVATAPSNSHFAAVGVYVDAGPIYETSIDRGVSHFVSSLAFKSTHGATES 74
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTK 198
++++ + +GGN+ +A+RE + Y L +P V+LL D P + E+ E+
Sbjct: 75 QVLKTMAGLGGNLFCTATRESILYQGSVLHHDLPRTVQLLADTTLRPALTEEEIAERRAT 134
Query: 199 VKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLA-PESAINRLNSTLLEEFVAENYTG 256
+ E ++ + P + + E +H+ + G L N + P+ A N + T+ E F Y
Sbjct: 135 IAFEAEDLHSRPDAFIGEMMHAVAFGGRGLGNSIFCEPQRARNMTSDTIREYFA--TYLH 192
Query: 257 P-RMVLAASGVEHDQLVSVAE----PLLSDLPSIHPREEPKSVYTGGDYR--------CQ 303
P RMV+A +GV H +LV + P + PS + ++ Y GG ++
Sbjct: 193 PSRMVVAGTGVAHAELVDLVSKAFVPSSTRAPSSVTHSDIETAYVGGSHQLVIPKPPPTH 252
Query: 304 ADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVL 363
+ LTH +AF +P H D ++ LQ+L+GGGG+FSAGGPGKGMYSRLY VL
Sbjct: 253 PNYEQTLTHVQVAFPVPPFTHPDM--FPVSTLQVLMGGGGAFSAGGPGKGMYSRLYTNVL 310
Query: 364 NEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDR 423
N + ++S +AF + Y+ + +FGI + F ++ A E + +A + ++ R
Sbjct: 311 NRYRWMESCAAFQHAYSSTSLFGISASCVPSFNPHLCNVLAGEFVHMAR--NLSDEEVAR 368
Query: 424 AKQSTKSAILMNLESRMVVSEDIGRQVLTYGER-KPVEHFLKTVEGVTAKDIASVAQKLL 482
AK KS++LMNLES+++ EDIGRQVL +R +P+E + + VT D+ VA+ L+
Sbjct: 369 AKNQLKSSLLMNLESQVITVEDIGRQVLAQNQRLEPLE-LVNNISAVTRDDLVRVAEALV 427
Query: 483 SSPLTMASYGD 493
+ P TM + G+
Sbjct: 428 AKPPTMVAVGE 438
>sp|Q0P5M8|MPPA_BOVIN Mitochondrial-processing peptidase subunit alpha OS=Bos taurus
GN=PMPCA PE=2 SV=1
Length = 525
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 156/475 (32%), Positives = 244/475 (51%), Gaps = 26/475 (5%)
Query: 57 LDFPLPGVSLPP-SLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESP 115
L PLPGV P + D E +TK++TL NG+++AS+ ++ + + GS YE+
Sbjct: 44 LSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAK 103
Query: 116 ISFGTTHLLERMAFRST-RNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEM 174
G H LE++AF ST R S I+ +E GG SR+ Y+ A + +
Sbjct: 104 YLSGIAHFLEKLAFSSTERFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTV 163
Query: 175 VELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSN--NPQSLLLEAIHSAGY-SGALANPL 231
V LL D V +P D E+ V+ E+ +++ +P+ LL E +H A Y +
Sbjct: 164 VGLLADVVLHPRLTDEEIEMARMAVQFELEDLNMRPDPEPLLTEMVHEAAYRENTVGLHR 223
Query: 232 LAPESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEP-LLSDLPS------ 284
P + +++ +L ++ YT RMVLA GVEH QLV A LL P+
Sbjct: 224 FCPAENVGKMDRDVLHAYLRNYYTPDRMVLAGVGVEHAQLVECARKYLLGTCPAWGTGAA 283
Query: 285 IHPREEPKSVYTGGDYRCQADSGD---------QLTHFVLAFELPGGWHKDKDAMTLTVL 335
+H + + YTGG + + D + +LTH ++ E + D + VL
Sbjct: 284 VHV-DRSVAQYTGGIVKLERDMSNVSLGPTPFPELTHIMIGLE--SCSFLEGDFIPFAVL 340
Query: 336 QMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDF 395
M++GGGGSFSAGGPGKGM++RLY VLN + + +++ + Y +G+ I +
Sbjct: 341 NMMMGGGGSFSAGGPGKGMFTRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQ 400
Query: 396 VSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGE 455
V + +++ RE + +A G VD V+L+RAK S ++MNLE+R V+ ED+GRQVL
Sbjct: 401 VREMVEIVTREFVLMA--GTVDVVELERAKTQLTSMLMMNLEARPVIFEDVGRQVLATRS 458
Query: 456 RKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAVSSKFKSK 510
RK + V +DI VA K+L +A+ GD+ +P+Y+ V + S+
Sbjct: 459 RKLPHELCALIRDVKPEDIKRVASKMLRGKPAVAALGDLSELPAYEHVQAALASR 513
>sp|Q9DC61|MPPA_MOUSE Mitochondrial-processing peptidase subunit alpha OS=Mus musculus
GN=Pmpca PE=1 SV=1
Length = 524
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 152/471 (32%), Positives = 239/471 (50%), Gaps = 24/471 (5%)
Query: 60 PLPGVSLPP-SLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISF 118
PLPGV P + D E +TK++TL NG+++AS+ ++ + + GS YE+
Sbjct: 46 PLPGVPKPIFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLS 105
Query: 119 GTTHLLERMAFRST-RNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVEL 177
G H LE++AF ST R S I+ +E GG SR+ Y+ A + +V+L
Sbjct: 106 GIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDL 165
Query: 178 LIDCVRNPVFLDWEVNEQLTKVKSEISEVSN--NPQSLLLEAIHSAGY-SGALANPLLAP 234
L D V +P D E+ V+ E+ +++ +P+ LL E IH A + + P
Sbjct: 166 LADVVLHPRLTDEEIEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCP 225
Query: 235 ESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDL------PSIHPR 288
I +++ +L ++ YT RMVLA GVEH+ LV A L P
Sbjct: 226 VENIAKIDREVLHSYLKNYYTPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDV 285
Query: 289 EEPKSVYTGGDYRCQADSGD---------QLTHFVLAFELPGGWHKDKDAMTLTVLQMLL 339
+ + YTGG + + D + +LTH ++ E + D + VL M++
Sbjct: 286 DRSVAQYTGGIIKVERDMSNVSLGPTPIPELTHIMVGLE--SCSFLEDDFIPFAVLNMMM 343
Query: 340 GGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKA 399
GGGGSFSAGGPGKGM+SRLY VLN + + +++ + Y +G+ I + V +
Sbjct: 344 GGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREM 403
Query: 400 IDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPV 459
+++ +E I + VD V+L+RAK S ++MNLESR V+ ED+GRQVL RK
Sbjct: 404 VEIITKEFILMGR--TVDLVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLP 461
Query: 460 EHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAVSSKFKSK 510
+ V +DI VA K+L +A+ GD+ ++P+Y+ + + S+
Sbjct: 462 HELCTLIRNVKPEDIKRVASKMLRGKPAVAALGDLTDLPTYEHIQAALSSR 512
>sp|Q3SZ71|MPPB_BOVIN Mitochondrial-processing peptidase subunit beta OS=Bos taurus
GN=PMPCB PE=2 SV=1
Length = 490
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 223/439 (50%), Gaps = 18/439 (4%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T+++ L NG+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS
Sbjct: 58 ETRVTCLENGLRVASEDSGLATCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 117
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
L + E+E +G ++ A SREQ Y A +P VE+L D ++N + E+ +
Sbjct: 118 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 177
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E+ EV N Q ++ + +H+ Y AL +L P I +N L +++ +Y G
Sbjct: 178 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKG 237
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPK---SVYTGGDYRCQADSGDQLTH 312
PR+VLAA+ GV HD+L+ +A+ + S H E P +TG + R + D L H
Sbjct: 238 PRIVLAAAGGVSHDELLELAKFHFGESLSTHKGEIPALPPCKFTGSEIRVRDDKM-PLAH 296
Query: 313 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGG-SFSAGGPGKGMYSRLYRRVLNEFPQVQS 371
+A E G H D + L V L+G SF G G + S+L + + S
Sbjct: 297 LAVAVEAVGWAH--PDTICLMVANTLIGNWDRSF---GGGMNLSSKLAQLTCHG-NLCHS 350
Query: 372 FSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSA 431
F +F+ Y +G++GI V+ + + +E + + T V + ++ RAK K+
Sbjct: 351 FQSFNTSYTDTGLWGIYMVCEPATVADMLHVVQKEWMRLCTS--VTESEVARAKNLLKTN 408
Query: 432 ILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLL--SSPLTMA 489
+L+ L+ + EDIGRQ+L Y R P+ ++ V A+ I V K + SP +A
Sbjct: 409 MLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAEIIREVCTKYIYDKSP-AVA 467
Query: 490 SYGDVINVPSYDAVSSKFK 508
+ G + +P ++ + S +
Sbjct: 468 AVGPIEQLPDFNQICSNMR 486
>sp|Q9DB77|QCR2_MOUSE Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus
GN=Uqcrc2 PE=1 SV=1
Length = 453
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/435 (30%), Positives = 219/435 (50%), Gaps = 11/435 (2%)
Query: 67 PPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLER 126
P +P ++P + + LPNG+ IAS + +P++ I L+V GS YE + GT+HLL
Sbjct: 28 PGGVP--LQPQDLEFTKLPNGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTSHLLRL 85
Query: 127 MAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPV 186
+ +T+ S +I R +EA+GG + +A+RE M Y+ + +++ + ++E L++ P
Sbjct: 86 ASSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPE 145
Query: 187 FLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLL 246
F WEV +++K + + N Q+ ++E +H Y ALANPL P+ + ++ S L
Sbjct: 146 FRRWEVAALRSQLKIDKAVAFQNSQTRIIENLHDVAYKNALANPLYCPDYRMGKITSEEL 205
Query: 247 EEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADS 306
FV ++T RM L GV H L VAE L ++ K+ Y GG+ R Q +
Sbjct: 206 HYFVQNHFTSARMALVGLGVSHSVLKQVAEQFL-NMRGGLGLAGAKAKYRGGEIREQ--N 262
Query: 307 GDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF 366
GD L H + E + + +A +VLQ LLG G G S L + V
Sbjct: 263 GDNLVHAAIVAESAAIGNAEANA--FSVLQHLLGAGPHIK---RGNNTTSLLSQSVAKGS 317
Query: 367 PQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQ 426
Q SAF+ Y+ SG+FGI + + + I+ A ++ +VA G + + AK
Sbjct: 318 HQPFDVSAFNASYSDSGLFGIYTISQAAAAGEVINAAYNQVKAVAQ-GNLSSADVQAAKN 376
Query: 427 STKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPL 486
K+ LM++E+ +IG Q L G P L+ ++ V D+ A+K +S
Sbjct: 377 KLKAGYLMSVETSEGFLSEIGSQALAAGSYMPPSTVLQQIDSVADADVVKAAKKFVSGKK 436
Query: 487 TMASYGDVINVPSYD 501
+MA+ G++ + P D
Sbjct: 437 SMAASGNLGHTPFLD 451
>sp|P32551|QCR2_RAT Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus
norvegicus GN=Uqcrc2 PE=1 SV=2
Length = 452
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 220/442 (49%), Gaps = 11/442 (2%)
Query: 60 PLPGVSLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFG 119
P S P +P ++P + + + LPNG+ IAS + +P++ I L++ GS YE+ G
Sbjct: 20 PKLKTSAPGGVP--LQPQELEFTKLPNGLVIASLENYAPLSRIGLFIKAGSRYENYNYLG 77
Query: 120 TTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLI 179
T+HLL + +T+ S +I R +EA+GG + +A+RE M Y+ + ++ + ++E L+
Sbjct: 78 TSHLLRLASTLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRDDIEILMEFLL 137
Query: 180 DCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAIN 239
+ P F WEV +++K + + NPQ+ ++E +H Y ALANPL P+ +
Sbjct: 138 NVTTAPEFRRWEVAALRSQLKIDKAVAFQNPQTRIIENLHDVAYKNALANPLYCPDYRMG 197
Query: 240 RLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGD 299
++ S L FV ++T RM L GV H L VAE L+ + K+ Y GG+
Sbjct: 198 KITSEELHYFVQNHFTSARMALVGLGVSHSILKEVAEQFLNIRGGL-GLAGAKAKYRGGE 256
Query: 300 YRCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLY 359
R Q +GD L H + E + + +A +VLQ LLG G G S L
Sbjct: 257 IREQ--NGDNLVHAAIVAESAAIGNAEANA--FSVLQHLLGAGPHIK---RGNNTTSLLS 309
Query: 360 RRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQV 419
+ V Q SAF+ Y+ SG+FGI + + I+ A ++ +VA G +
Sbjct: 310 QSVAKGSQQPFDVSAFNASYSDSGLFGIYTVSQAAAAGDVINAAYNQVKAVAQ-GNLSSA 368
Query: 420 QLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQ 479
+ AK K+ LM++E+ +IG Q L G P L+ ++ V D+ A+
Sbjct: 369 DVQAAKNKLKAGYLMSVETSEGFLSEIGSQALATGSYMPPPTVLQQIDAVADADVVKAAK 428
Query: 480 KLLSSPLTMASYGDVINVPSYD 501
K +S +M + G++ + P D
Sbjct: 429 KFVSGKKSMTASGNLGHTPFLD 450
>sp|Q42290|MPPB_ARATH Probable mitochondrial-processing peptidase subunit beta
OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2
Length = 531
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 233/444 (52%), Gaps = 25/444 (5%)
Query: 78 KTKISTLPNGVKIASETSVS-PVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRS 136
+T+++TLPNG+++A+E+++S A++ +++ GS +ES + GT H LE M F+ T R+
Sbjct: 96 ETRVTTLPNGLRVATESNLSAKTATVGVWIDAGSRFESDETNGTAHFLEHMIFKGTDRRT 155
Query: 137 HLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQL 196
+ E+E IGG++ A SREQ Y L + V + +++L D ++N F + +N +
Sbjct: 156 VRALEEEIEDIGGHLNAYTSREQTTYYAKVLDSNVNQALDVLADILQNSKFEEQRINRER 215
Query: 197 TKVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYT 255
+ E+ EV ++L+ +H+ + L +L P + + L+ ++ +YT
Sbjct: 216 DVILREMQEVEGQTDEVVLDHLHATAFQYTPLGRTILGPAQNVKSITREDLQNYIKTHYT 275
Query: 256 GPRMVLAASG-VEHDQLVSVAEPLLSDL---PSIHPR---EEPKSVYTGGDYRCQADSGD 308
RMV+AA+G V+H+++V + L + L P+ + EP S +TG + R D
Sbjct: 276 ASRMVIAAAGAVKHEEVVEQVKKLFTKLSSDPTTTSQLVANEPAS-FTGSEVRM-IDDDL 333
Query: 309 QLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRV-LNEFP 367
L F +AFE G D D++ L V+Q +LG GG G S L +RV +NE
Sbjct: 334 PLAQFAVAFE--GASWTDPDSVALMVMQTMLGSWNKNVGGGKHVG--SDLTQRVAINEI- 388
Query: 368 QVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQS 427
+S AF+ Y +G+FG+ +D + E+ +A V + RA+
Sbjct: 389 -AESIMAFNTNYKDTGLFGVYAVAKADCLDDLSYAIMYEVTKLAY--RVSDADVTRARNQ 445
Query: 428 TKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQK-LLSSPL 486
KS++L++++ ++EDIGRQ+LTYG R P ++ V A + VA K + +
Sbjct: 446 LKSSLLLHMDGTSPIAEDIGRQLLTYGRRIPTAELFARIDAVDASTVKRVANKYIYDKDI 505
Query: 487 TMASYGDVINVPSYDAVSSKFKSK 510
+++ G + ++P Y+ KF+ +
Sbjct: 506 AISAIGPIQDLPDYN----KFRRR 525
>sp|O75439|MPPB_HUMAN Mitochondrial-processing peptidase subunit beta OS=Homo sapiens
GN=PMPCB PE=1 SV=2
Length = 489
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 221/438 (50%), Gaps = 18/438 (4%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T+++ L +G+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS
Sbjct: 57 ETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
L + E+E +G ++ A SREQ Y A +P VE+L D ++N + E+ +
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E+ EV N Q ++ + +H+ Y AL +L P I ++ L +++ +Y G
Sbjct: 177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKG 236
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPK---SVYTGGDYRCQADSGDQLTH 312
PR+VLAA+ GV HD+L+ +A+ D H E P +TG + R + D L H
Sbjct: 237 PRIVLAAAGGVSHDELLDLAKFHFGDSLCTHKGEIPALPPCKFTGSEIRVRDDKM-PLAH 295
Query: 313 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGG-SFSAGGPGKGMYSRLYRRVLNEFPQVQS 371
+A E G H D + L V L+G SF G G + S+L + + S
Sbjct: 296 LAIAVEAVGWAH--PDTICLMVANTLIGNWDRSF---GGGMNLSSKLAQLTCHG-NLCHS 349
Query: 372 FSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSA 431
F +F+ Y +G++G+ S V+ + + +E + + T V + ++ RA+ K+
Sbjct: 350 FQSFNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTS--VTESEVARARNLLKTN 407
Query: 432 ILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLL--SSPLTMA 489
+L+ L+ + EDIGRQ+L Y R P+ ++ V A+ I V K + SP +A
Sbjct: 408 MLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSP-AIA 466
Query: 490 SYGDVINVPSYDAVSSKF 507
+ G + +P + + S
Sbjct: 467 AVGPIKQLPDFKQIRSNM 484
>sp|Q5REK3|MPPB_PONAB Mitochondrial-processing peptidase subunit beta OS=Pongo abelii
GN=PMPCB PE=2 SV=1
Length = 489
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 220/438 (50%), Gaps = 18/438 (4%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T+++ L +G+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS
Sbjct: 57 ETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
L + E+E +G ++ A SREQ Y A +P VE+L D ++N + E+ +
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E+ EV N Q ++ + +H+ Y AL +L P I ++ L +++ +Y G
Sbjct: 177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKG 236
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPK---SVYTGGDYRCQADSGDQLTH 312
PR+VLAA+ GV HD+L+ +A+ D H E P +TG + R + D L H
Sbjct: 237 PRIVLAAAGGVSHDELLDLAKFHFGDSLCTHKGEIPALPPCKFTGSEIRVRDDKM-PLAH 295
Query: 313 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGG-SFSAGGPGKGMYSRLYRRVLNEFPQVQS 371
+A E G H D + L V L+G SF G G + S+L + + S
Sbjct: 296 LAIAVEAVGWAH--PDTICLMVANTLIGNWDRSF---GGGMNLSSKLAQLTCHG-NLCHS 349
Query: 372 FSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSA 431
F +F+ Y +G++G+ V+ + + +E + + T V + ++ RA+ K+
Sbjct: 350 FQSFNTSYTDTGLWGLYMVCEPSTVADMLHVVQKEWMRLCT--SVTESEVARARNLLKTN 407
Query: 432 ILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLL--SSPLTMA 489
+L+ L+ + EDIGRQ+L Y R P+ ++ V A+ I V K + SP +A
Sbjct: 408 MLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSP-AIA 466
Query: 490 SYGDVINVPSYDAVSSKF 507
+ G + +P + + S
Sbjct: 467 AVGPIEQLPDFKQICSNM 484
>sp|P23004|QCR2_BOVIN Cytochrome b-c1 complex subunit 2, mitochondrial OS=Bos taurus
GN=UQCRC2 PE=1 SV=2
Length = 453
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 217/435 (49%), Gaps = 11/435 (2%)
Query: 67 PPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLER 126
P +P + P + + LPNG+ IAS + +P + I L++ GS YE+ + GT+HLL
Sbjct: 28 PAGVPPH--PQDLEFTRLPNGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLLRL 85
Query: 127 MAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPV 186
+ +T+ S +I R +EA+GG + +++RE M Y+ + L+ V ++E L++ P
Sbjct: 86 ASSLTTKGASSFKITRGIEAVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPE 145
Query: 187 FLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLL 246
F WEV +++ + + NPQ+ ++E +H+A Y ALAN L P+ I ++ L
Sbjct: 146 FRRWEVAALQPQLRIDKAVALQNPQAHVIENLHAAAYRNALANSLYCPDYRIGKVTPVEL 205
Query: 247 EEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADS 306
++V ++T RM L GV H L VAE L+ + K+ Y GG+ R Q +
Sbjct: 206 HDYVQNHFTSARMALIGLGVSHPVLKQVAEQFLNIRGGL-GLSGAKAKYHGGEIREQ--N 262
Query: 307 GDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF 366
GD L H L E + +A +VLQ +LG G G S LY+ V
Sbjct: 263 GDSLVHAALVAESAAIGSAEANA--FSVLQHVLGAGPHVKR---GSNATSSLYQAVAKGV 317
Query: 367 PQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQ 426
Q SAF+ Y+ SG+FG + + I A ++ ++A G + + AK
Sbjct: 318 HQPFDVSAFNASYSDSGLFGFYTISQAASAGDVIKAAYNQVKTIAQ-GNLSNPDVQAAKN 376
Query: 427 STKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPL 486
K+ LM++ES +++G Q L G P L+ ++ V D+ + A+K +S
Sbjct: 377 KLKAGYLMSVESSEGFLDEVGSQALAAGSYTPPSTVLQQIDAVADADVINAAKKFVSGRK 436
Query: 487 TMASYGDVINVPSYD 501
+MA+ G++ + P D
Sbjct: 437 SMAASGNLGHTPFID 451
>sp|Q03346|MPPB_RAT Mitochondrial-processing peptidase subunit beta OS=Rattus
norvegicus GN=Pmpcb PE=1 SV=3
Length = 489
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 221/439 (50%), Gaps = 18/439 (4%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T+++ L NG+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS
Sbjct: 57 ETQVTCLENGLRVASENSGISTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
L + E+E +G ++ A SREQ Y A +P VE+L D ++N + E+ +
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E+ EV N Q ++ + +H+ Y AL +L P I ++ L +++ +Y G
Sbjct: 177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKG 236
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPK---SVYTGGDYRCQADSGDQLTH 312
PR+VLAA+ GV H++L+ +A+ D H + P +TG + R + D L H
Sbjct: 237 PRIVLAAAGGVCHNELLELAKFHFGDSLCAHKGDVPALPPCKFTGSEIRVRDDKM-PLAH 295
Query: 313 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGG-SFSAGGPGKGMYSRLYRRVLNEFPQVQS 371
+A E G H D + L V L+G SF G G + S+L + + S
Sbjct: 296 LAVAIEAVGWTH--PDTICLMVANTLIGNWDRSF---GGGMNLSSKLAQLTCHG-NLCHS 349
Query: 372 FSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSA 431
F +F+ Y +G++G+ V+ + +E + + T V + ++ RAK K+
Sbjct: 350 FQSFNTSYTDTGLWGLYMVCEQATVADMLHAVQKEWMRLCTA--VSESEVARAKNLLKTN 407
Query: 432 ILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLL--SSPLTMA 489
+L+ L+ + EDIGRQ+L Y R P+ ++ V A+ + V K + SP +A
Sbjct: 408 MLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAEMVREVCTKYIYGKSP-AIA 466
Query: 490 SYGDVINVPSYDAVSSKFK 508
+ G + +P ++ + S +
Sbjct: 467 ALGPIERLPDFNQICSNMR 485
>sp|Q9CXT8|MPPB_MOUSE Mitochondrial-processing peptidase subunit beta OS=Mus musculus
GN=Pmpcb PE=2 SV=1
Length = 489
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 220/438 (50%), Gaps = 16/438 (3%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T+++ L NG+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS
Sbjct: 57 ETQVTCLENGLRVASENSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
L + E+E +G ++ A SREQ Y A +P VE+L D ++N + E+ +
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSRDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E+ EV N Q ++ + +H+ Y AL +L P I +N L +++ +Y G
Sbjct: 177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKG 236
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPK---SVYTGGDYRCQADSGDQLTH 312
PR+VLAA+ GV H++L+ +A+ D H P +TG + R + D L H
Sbjct: 237 PRIVLAAAGGVCHNELLELAKFHFGDSLCSHKGAIPALPPCKFTGSEIRVRDDKM-PLAH 295
Query: 313 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSF 372
+A E G H D + L V L+G S GG G + S+L + + SF
Sbjct: 296 LAIAVEAVGWAH--PDTICLMVANTLIGNWDR-SFGG-GMNLSSKLAQLTCHG-NLCHSF 350
Query: 373 SAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAI 432
+F+ Y +G++G+ V+ + + E + T +V + ++ RAK K+ +
Sbjct: 351 QSFNTSYTDTGLWGLYMVCEQATVADMLHVVQNEWKRLCT--DVTESEVARAKNLLKTNM 408
Query: 433 LMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLL--SSPLTMAS 490
L+ L+ + EDIGRQ+L Y R P+ ++ V A+ + V K + SP +A+
Sbjct: 409 LLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAETVRRVCTKYIHDKSP-AIAA 467
Query: 491 YGDVINVPSYDAVSSKFK 508
G + +P ++ + S +
Sbjct: 468 LGPIERLPDFNQICSNMR 485
>sp|P20069|MPPA_RAT Mitochondrial-processing peptidase subunit alpha OS=Rattus
norvegicus GN=Pmpca PE=1 SV=1
Length = 524
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 156/481 (32%), Positives = 241/481 (50%), Gaps = 38/481 (7%)
Query: 57 LDFPLPGVSLPP-SLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESP 115
L PLPGV P + D E +TK++TL NG+++AS+ ++ + + GS YE+
Sbjct: 43 LSSPLPGVPKPIFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTLGILINSGSRYEAK 102
Query: 116 ISFGTTHLLERMAFRST-RNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEM 174
G H LE++AF ST R S I+ +E GG SR+ Y+ A + +
Sbjct: 103 YLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTV 162
Query: 175 VELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSN--NPQSLLLEAIHSAGY-SGALANPL 231
V LL D V +P D E+ V+ E+ +++ +P+ LL E IH A + +
Sbjct: 163 VGLLADVVLHPRLTDEEIEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHR 222
Query: 232 LAPESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEP-LLSDLPSIHPREE 290
P I +++ +L ++ YT RMVLA GVEH+ LV A LL P+
Sbjct: 223 FCPVENIGKIDREVLHSYLKNYYTPDRMVLAGVGVEHEHLVECARKYLLGVQPAW---GA 279
Query: 291 PKSVYT---------GGDYR----CQADSGD----QLTHFVLAFELPGGWHK----DKDA 329
P +V+ GG R CQ + Q +H GG + ++D
Sbjct: 280 PGAVWMLTAQWHSTRGGSSRWRETCQMSALRPPRFQSSHIY------GGARELLLLEEDF 333
Query: 330 MTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQG 389
+ VL M++GGGGSFSAGGPGKGM+SRLY VLN + + +++ + Y +G+ I
Sbjct: 334 IPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHA 393
Query: 390 TTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQ 449
+ V + +++ +E I + VD V+L+RAK S ++MNLESR V+ ED+GRQ
Sbjct: 394 SADPRQVREMVEIITKEFILMGR--TVDLVELERAKTQLMSMLMMNLESRPVIFEDVGRQ 451
Query: 450 VLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAVSSKFKS 509
VL RK + V +DI VA K+L +A+ GD+ ++P+Y+ + + S
Sbjct: 452 VLATHSRKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAALGDLTDLPTYEHIQAALSS 511
Query: 510 K 510
+
Sbjct: 512 R 512
>sp|P43264|QCR1_EUGGR Ubiquinol-cytochrome-c reductase complex core protein I,
mitochondrial OS=Euglena gracilis PE=2 SV=1
Length = 494
Score = 189 bits (479), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 214/425 (50%), Gaps = 33/425 (7%)
Query: 82 STLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIV 141
+ LPNG +IASE+ ++ +++ GS +E+ + G H LE M F+ T RS I
Sbjct: 30 NALPNGFRIASESKDGDTCTVGVWIDAGSRWETEKNNGVAHFLEHMNFKGTGKRSRQDIE 89
Query: 142 REVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKS 201
+E +G ++ A SRE Y K VPE V++L D + N + +++ + +
Sbjct: 90 FGMEKMGAHLNAYTSREHTCYYVKCFKKDVPEAVDILADILLNSKRTEQDLDAERQTIVQ 149
Query: 202 EISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINR-LNSTLLEEFVAENYTGPRM 259
E +V +L++ +HSA + G+ L +L P I + + ++++FV +YTGPRM
Sbjct: 150 EKEDVEARIDEVLMDHLHSAAFEGSGLGLSILGPLENIQKSITKGMIDDFVKTHYTGPRM 209
Query: 260 VLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLAFE 318
L SG V+H QL +A LP+ P+ + + GGD R + + + LTH +AF+
Sbjct: 210 ALVGSGAVDHGQLCDLASKYFGALPTGQPKPSGFTRFLGGDKR-ETNQLNPLTHVAVAFQ 268
Query: 319 LPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF--PQV------- 369
PG H DA+ + VL+ LL GS+S G+ YS R ++ +F P+V
Sbjct: 269 TPGISH--PDAIKIKVLEQLL---GSYSR-DKGEAAYSCFARAIVMDFYDPKVGQFFRPN 322
Query: 370 -------QSFSAFSNIYNHSGMFGIQ-----GTTGSDFVSKAIDLAARELISVATPGEVD 417
S +AF Y+ G+ G G + + A RELI V+ +
Sbjct: 323 KAGHNPIHSLNAFWAPYSDVGLLGFYAIAEPGKSYGHEWENILHYAMRELIRVSR--NIS 380
Query: 418 QVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASV 477
+ + +RAK K ++ L+ +++DIGRQVL++G R P+ F + ++ ++ +D+ V
Sbjct: 381 EEEFERAKNQLKLQTMLQLDGTTNIADDIGRQVLSFGARVPLASFFEQLDAISREDLIRV 440
Query: 478 AQKLL 482
++L
Sbjct: 441 GPRVL 445
>sp|Q4W6B5|MPPB_DICDI Mitochondrial-processing peptidase subunit beta OS=Dictyostelium
discoideum GN=mppB PE=1 SV=1
Length = 469
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 222/446 (49%), Gaps = 24/446 (5%)
Query: 71 PDYVEPG-KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAF 129
P Y++ +TKI+TL NG+++A+E + VAS+ ++V GS+YE+ + G H LE M F
Sbjct: 26 PSYLKISPETKITTLSNGIRVATEQTYGEVASVGVWVDSGSVYETDKNNGVAHFLEHMIF 85
Query: 130 RSTRNR-SHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFL 188
+ T R + I E+E +GG++ A SRE Y LK VP V++L D ++N F
Sbjct: 86 KGTAKRPTPQSIETEIENMGGSLNAFTSREHSAYYMKVLKDNVPNAVDILSDILQNSKFE 145
Query: 189 DWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLE 247
+ ++ + SE + + ++ + +H+A + G AL +L P I + ++
Sbjct: 146 TSLIEQERDTILSENDYIQSKEDEVVFDQLHAAAFQGSALGRTILGPVENIKSITREQIQ 205
Query: 248 EFVAENYTGPRMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSV-----YTGGDYR 301
EF+ ENYTG R+V++A+G V H+QLV + +++ ++ K + G + R
Sbjct: 206 EFINENYTGDRLVISAAGAVNHEQLVEQVKEKFANVKMSQVSKDVKRAAITNDFIGSELR 265
Query: 302 CQADSGDQLTHFVLAFE-LPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYR 360
+ D L HF +A LP W D D L ++Q ++G A GK + S L
Sbjct: 266 VRDDE-QPLIHFAVAVRALP--W-TDPDYFVLELIQTMIGNWNRGIAA--GKNIASNLGE 319
Query: 361 RVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQ 420
V E +S+S F Y +G+FG G + V + +E +AT ++V+
Sbjct: 320 IVATE-DLAESYSTFFTCYQDTGLFGNYGVCQPERVDDLVAEMLKEWQRIATSCNKNEVE 378
Query: 421 LDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGER-KPVEHFLKTVEGVTAKDIASVAQ 479
R KQ + LM + V E IGRQ+LT G R P E + + E +T D+ VA
Sbjct: 379 --RNKQKLLATTLMQYDGTSKVCEGIGRQILTLGRRLSPFEVYTRINE-ITVADVQRVAS 435
Query: 480 KLLS--SPLTMASYGDVINVPSYDAV 503
LL SP A G + N P Y+ V
Sbjct: 436 TLLRDVSPAVTA-IGPIANYPDYNFV 460
>sp|Q68FY0|QCR1_RAT Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus
norvegicus GN=Uqcrc1 PE=1 SV=1
Length = 480
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 222/440 (50%), Gaps = 25/440 (5%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T++S L NG+++ASE S P ++ +++ GS YE+ + G + LE +AF+ T+NR
Sbjct: 47 ETQVSVLDNGLRVASEQSSHPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRPG 106
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
+ +EVE+IG ++ A ++RE Y AL +P++VELL D V+N D ++ ++
Sbjct: 107 NALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNISLEDSQIEKERD 166
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E+ E + Q+++ + +H+ + G LA + P + RL+ T L ++++ +Y
Sbjct: 167 VILREMQENDASMQNVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLSRHYKA 226
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPKSV----YTGGDYRCQADSGDQLT 311
PRMVLAA+ GV+H QL+ +A+ S + ++ + S+ +TG + R D L
Sbjct: 227 PRMVLAAAGGVKHQQLLDLAQDHFSSVSQVYEEDAVPSITPCRFTGSEIR-HRDDALPLA 285
Query: 312 HFVLAFELPGGWHKDKDAMTLTVLQMLLGG-----GGSFSAGGPGKGMYSRLYRRVLNEF 366
H +A E P GW + D + L V ++G GG P + V N+
Sbjct: 286 HVAIAVEGP-GW-ANPDNVALQVANAIIGHYDCTYGGGVHLSSPLASV------AVANKL 337
Query: 367 PQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQ 426
QSF F+ Y+ +G+ G + + I + + + T +V R K
Sbjct: 338 --CQSFQTFNISYSETGLLGAHFVCDAMSIDDMIFFLQGQWMRLCTSATESEVT--RGKN 393
Query: 427 STKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPL 486
++A++ +L+ V EDIGR +LTYG R P+ + +E V A+ + V K
Sbjct: 394 ILRNALISHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIEEVDAQMVREVCSKYFYDQC 453
Query: 487 -TMASYGDVINVPSYDAVSS 505
+A YG + + Y+ + S
Sbjct: 454 PAVAGYGPIEQLSDYNRIRS 473
>sp|Q9CZ13|QCR1_MOUSE Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus
GN=Uqcrc1 PE=1 SV=2
Length = 480
Score = 186 bits (471), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 234/469 (49%), Gaps = 27/469 (5%)
Query: 50 RSSSSPSLDFPLPGVSLPPSLPDYVEP-GKTKISTLPNGVKIASETSVSPVASISLYVGC 108
R+ SP+L LP + + ++ +T++S L NG+++ASE S ++ +++
Sbjct: 19 RTRRSPAL-LRLPALRGTATFAQALQSVPETQVSILDNGLRVASEQSSHATCTVGVWIDA 77
Query: 109 GSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALK 168
GS YE+ + G + LE +AF+ T+NR + +EVE+IG ++ A ++RE Y AL
Sbjct: 78 GSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHLNAYSTREHTAYLIKALS 137
Query: 169 TYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGA-L 227
+P++VELL D V+N D ++ ++ + E+ E + Q+++ + +H+ + G L
Sbjct: 138 KDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQNVVFDYLHATAFQGTPL 197
Query: 228 ANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAAS-GVEHDQLVSVAEPLLSDLPSIH 286
A + P + RL+ T L +++ +Y PRMVLAA+ GVEH QL+ +A+ LS + ++
Sbjct: 198 AQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQQLLDLAQKHLSSVSRVY 257
Query: 287 PREEPKSV----YTGGDYRCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGG- 341
+ + +TG + R D L H +A E P GW + D +TL V ++G
Sbjct: 258 EEDAVPGLTPCRFTGSEIR-HRDDALPLAHVAIAVEGP-GW-ANPDNVTLQVANAIIGHY 314
Query: 342 ----GGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVS 397
GG P + V N+ QSF F+ Y+ +G+ G + +
Sbjct: 315 DCTYGGGVHLSSPLASV------AVANKL--CQSFQTFNISYSDTGLLGAHFVCDAMSID 366
Query: 398 KAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERK 457
+ + + + T +V R K ++A++ +L+ V EDIGR +LTYG R
Sbjct: 367 DMVFFLQGQWMRLCTSATESEVT--RGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRI 424
Query: 458 PVEHFLKTVEGVTAKDIASVAQKLLSSPL-TMASYGDVINVPSYDAVSS 505
P+ + ++ V A+ + + K +A YG + +P Y+ + S
Sbjct: 425 PLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRS 473
>sp|P31800|QCR1_BOVIN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus
GN=UQCRC1 PE=1 SV=2
Length = 480
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 213/440 (48%), Gaps = 25/440 (5%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T++S L NG+++ASE S P ++ +++ GS YES + G + +E +AF+ T+NR
Sbjct: 47 ETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPG 106
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
+ +EVE++G ++ A ++RE Y AL +P+ VELL D V+N D ++ ++
Sbjct: 107 NALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERD 166
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E+ E + + ++ +H+ + G LA + P + +L+ L E+++ +Y
Sbjct: 167 VILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYLSRHYKA 226
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPKSV----YTGGDYRCQADSGDQLT 311
PRMVLAA+ G+EH QL+ +A+ S L + + ++ +TG C + G L
Sbjct: 227 PRMVLAAAGGLEHRQLLDLAQKHFSGLSGTYDEDAVPTLSPCRFTGSQI-CHREDGLPLA 285
Query: 312 HFVLAFELPGGWHKDKDAMTLT-----VLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF 366
H +A E PG H D A+ + GGG S+ ++L
Sbjct: 286 HVAIAVEGPGWAHPDNVALQVANAIIGHYDCTYGGGAHLSSPLASIAATNKL-------- 337
Query: 367 PQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQ 426
QSF F+ Y +G+ G + + + + + + T +V R K
Sbjct: 338 --CQSFQTFNICYADTGLLGAHFVCDHMSIDDMMFVLQGQWMRLCTSATESEVL--RGKN 393
Query: 427 STKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPL 486
++A++ +L+ V EDIGR +LTYG R P+ + + V A+ + V K
Sbjct: 394 LLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCSKYFYDQC 453
Query: 487 -TMASYGDVINVPSYDAVSS 505
+A +G + +P Y+ + S
Sbjct: 454 PAVAGFGPIEQLPDYNRIRS 473
>sp|O94745|MPPA_SCHPO Probable mitochondrial-processing peptidase subunit alpha
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mas2 PE=3 SV=2
Length = 502
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 214/421 (50%), Gaps = 16/421 (3%)
Query: 75 EPGKTKIST--LPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRST 132
+P ++ T L NGV + + + +YV GS YE+ G +H ++R+AF++T
Sbjct: 48 DPALNEVRTEKLKNGVTYVCDPRPGHFSGLGVYVKAGSRYETKKFSGVSHFMDRLAFQAT 107
Query: 133 RNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEV 192
+ ++E +GGN S SRE M Y V M +LL + V P + ++
Sbjct: 108 ERTPVGEMKAKLENLGGNYMCSTSRESMIYQAAVFNDDVKSMSKLLAETVLAPKIQEDDL 167
Query: 193 NEQLTKVKSEISEVSNNPQSLLLEAIHSAGY-SGALANPLLAPESAINRLNSTLLEEFVA 251
+ E SE+ P +LL E H + + L N LL +N + +T + E++
Sbjct: 168 VHYRDSIIYENSELWTKPDALLGEFAHVTAFQNNTLGNCLLCTPDKVNGITATSIREYLK 227
Query: 252 ENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPS--IHPREEPKSVYTGGDYRCQADSG-- 307
Y + LA +G+ + + + L LPS + P E S YTGG +
Sbjct: 228 YFYRPEHLTLAYAGIPQEIAKEITKELYGHLPSSSLPPLEAIPSHYTGGFMGIKKSEAPP 287
Query: 308 ----DQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVL 363
+ TH V+A E G D D L LQ LLGGGGSFSAGGPGKGMYSRLY VL
Sbjct: 288 VPYQQEFTHVVIAME--GLPVTDPDIYALACLQFLLGGGGSFSAGGPGKGMYSRLYLNVL 345
Query: 364 NEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDR 423
N++P V++ AF++ Y SG+FG+ T D A L REL + V + +R
Sbjct: 346 NQYPWVETCMAFNHSYTDSGLFGMFVTILDDAAHLAAPLIIRELCNTVL--SVTSEETER 403
Query: 424 AKQSTKSAILMNLESRMVVSEDIGRQVLTY-GERKPVEHFLKTVEGVTAKDIASVAQKLL 482
AK KS++LMNLESRM+ ED+GRQ+ T G + ++ ++ +T D++ VA+++L
Sbjct: 404 AKNQLKSSLLMNLESRMISLEDLGRQIQTQNGLYITPKEMIEKIDALTPSDLSRVARRVL 463
Query: 483 S 483
+
Sbjct: 464 T 464
>sp|P31930|QCR1_HUMAN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens
GN=UQCRC1 PE=1 SV=3
Length = 480
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 216/441 (48%), Gaps = 27/441 (6%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T++S L NG+++ASE S P ++ +++ GS +E+ + G + LE +AF+ T+NR
Sbjct: 47 ETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPG 106
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
+ +EVE++G ++ A ++RE Y AL +P+ VELL D V+N D ++ ++
Sbjct: 107 SALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSLEDSQIEKERD 166
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E+ E + + ++ +H+ + G LA + P + +L+ L E+++ +Y
Sbjct: 167 VILREMQENDASMRDVVFNYLHATAFQGTPLAQAVEGPSENVRKLSRADLTEYLSTHYKA 226
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPKSV----YTGGDYRCQADSGDQLT 311
PRMVLAA+ GVEH QL+ +A+ L +P + + ++ +TG + R D
Sbjct: 227 PRMVLAAAGGVEHQQLLDLAQKHLGGIPWTYAEDAVPTLTPCRFTGSEIR-HRDDALPFA 285
Query: 312 HFVLAFELPGGWHKDKDAMTLTVLQMLLG------GGGSFSAGGPGKGMYSRLYRRVLNE 365
H +A E P GW D + L V ++G GGG + G V N+
Sbjct: 286 HVAIAVEGP-GW-ASPDNVALQVANAIIGHYDCTYGGGVHLSSPLASGA-------VANK 336
Query: 366 FPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAK 425
QSF FS Y +G+ G + + + + + + T +V R K
Sbjct: 337 L--CQSFQTFSICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCTSATESEVA--RGK 392
Query: 426 QSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSP 485
++A++ +L+ V EDIGR +LTYG R P+ + + V A + + K +
Sbjct: 393 NILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREICSKYIYDQ 452
Query: 486 L-TMASYGDVINVPSYDAVSS 505
+A YG + +P Y+ + S
Sbjct: 453 CPAVAGYGPIEQLPDYNRIRS 473
>sp|P11913|MPPB_NEUCR Mitochondrial-processing peptidase subunit beta OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=pep PE=1 SV=1
Length = 476
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 217/434 (50%), Gaps = 19/434 (4%)
Query: 78 KTKISTLPNGVKIASETS-VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRS 136
KT+ +TL NG+ +AS+ S + +++ +++ GS E+ + GT H LE +AF+ T R+
Sbjct: 39 KTQTTTLKNGLTVASQYSPYAQTSTVGMWIDAGSRAETDETNGTAHFLEHLAFKGTTKRT 98
Query: 137 HLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQL 196
++ E+E +G ++ A SRE Y AL VP+ V++L D ++N + + +
Sbjct: 99 QQQLELEIENMGAHLNAYTSRENTVYFAKALNEDVPKCVDILQDILQNSKLEESAIERER 158
Query: 197 TKVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYT 255
+ E EV + ++ + +H+ Y L +L P I + T L ++ NYT
Sbjct: 159 DVILRESEEVEKQLEEVVFDHLHATAYQHQPLGRTILGPRENIRDITRTELVNYIKNNYT 218
Query: 256 GPRMVL-AASGVEHDQLVSVAEPLLSDLPSIHP------REEPKSVYTGGDYRCQADSGD 308
RMVL A GV H+QLV +A+ S LP+ P + K + G D R + D+
Sbjct: 219 ADRMVLVGAGGVPHEQLVEMADKYFSKLPATAPVSSASILSKKKPDFIGSDIRIRDDT-- 276
Query: 309 QLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQ 368
+ +A + G D D T V Q ++G P +G S+L V ++
Sbjct: 277 -IPTANIAIAVEGVSWSDDDYFTGLVTQAIVGNYDKALGNAPHQG--SKLSGFV-HKHDL 332
Query: 369 VQSFSAFSNIYNHSGMFGIQGTTGS-DFVSKAIDLAARELISVATPGEVDQVQLDRAKQS 427
SF +FS Y+ +G++GI T D V + + RE + + V + +++RAK
Sbjct: 333 ATSFMSFSTSYSDTGLWGIYLVTDKLDRVDDLVHFSLREWTRLCS--NVSEAEVERAKAQ 390
Query: 428 TKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVA-QKLLSSPL 486
K++IL++L+ V+EDIGRQ++T G R + ++ V+AKD+ A +K+ +
Sbjct: 391 LKASILLSLDGTTAVAEDIGRQIVTTGRRMSPAEIERIIDAVSAKDVMDFANKKIWDQDI 450
Query: 487 TMASYGDVINVPSY 500
+++ G + + Y
Sbjct: 451 AISAVGSIEGLFDY 464
>sp|P10507|MPPB_YEAST Mitochondrial-processing peptidase subunit beta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAS1 PE=1
SV=1
Length = 462
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 214/446 (47%), Gaps = 23/446 (5%)
Query: 76 PGKTKISTLPNGVKIASE-TSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRN 134
PG T+ S LPNG+ IA+E + A++ ++V GS E+ + GT H LE +AF+ T+N
Sbjct: 24 PG-TRTSKLPNGLTIATEYIPNTSSATVGIFVDAGSRAENVKNNGTAHFLEHLAFKGTQN 82
Query: 135 RSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNE 194
RS I E+E IG ++ A SRE Y +L+ +P+ V++L D + V + +
Sbjct: 83 RSQQGIELEIENIGSHLNAYTSRENTVYYAKSLQEDIPKAVDILSDILTKSVLDNSAIER 142
Query: 195 QLTKVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAEN 253
+ + E EV ++ + +H Y L +L P I + T L++++ +N
Sbjct: 143 ERDVIIRESEEVDKMYDEVVFDHLHEITYKDQPLGRTILGPIKNIKSITRTDLKDYITKN 202
Query: 254 YTGPRMVLAASG-VEHDQLVSVAEPLLSDLPSIH-------PREEPKSVYTGGDYRCQAD 305
Y G RMVLA +G V+H++LV A+ +P PR P V+ G+ R +
Sbjct: 203 YKGDRMVLAGAGAVDHEKLVQYAQKYFGHVPKSESPVPLGSPR-GPLPVFCRGE-RFIKE 260
Query: 306 SGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNE 365
+ TH +A E G D Q ++G A G G S L
Sbjct: 261 NTLPTTHIAIALE--GVSWSAPDYFVALATQAIVGNWD--RAIGTGTNSPSPLAVAASQN 316
Query: 366 FPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELI---SVATPGEVDQVQLD 422
S+ +FS Y SG++G+ T S+ + L E++ G++ +++
Sbjct: 317 GSLANSYMSFSTSYADSGLWGMYIVTDSN--EHNVQLIVNEILKEWKRIKSGKISDAEVN 374
Query: 423 RAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQ-KL 481
RAK K+A+L++L+ + EDIGRQV+T G+R E + V+ +T DI A +L
Sbjct: 375 RAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYRL 434
Query: 482 LSSPLTMASYGDVINVPSYDAVSSKF 507
+ P++M + G+ VP+ + K
Sbjct: 435 QNKPVSMVALGNTSTVPNVSYIEEKL 460
>sp|Q9Y8B5|MPPB_LENED Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes
GN=mppB PE=3 SV=1
Length = 466
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 218/447 (48%), Gaps = 28/447 (6%)
Query: 79 TKISTLPNGVKIASETS-VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
T+ISTL NG+ +A+E+ + A++ +++ GS E+ + GT H LE MAF+ T RS
Sbjct: 29 TEISTLSNGLTVATESQPHAQTATVGVWIDAGSRAETDKTNGTAHFLEHMAFKGTGRRSQ 88
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
+ EVE IG ++ A SREQ Y + VP V+++ D ++N + +
Sbjct: 89 HALELEVENIGAHLNAYTSREQTVYYAKSFSKDVPVAVDIISDILQNSKLESGAIERERD 148
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E EV + ++ + +H+ + G L +L P++ I + L ++ NYT
Sbjct: 149 VILREQQEVDKQLEEVVFDHLHAVAFQGQPLGRTILGPKNNILSIQRDDLASYIQTNYTA 208
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLP-SIHP------REEPKSVYTGGDYRCQADSGD 308
RMVL + GV+H LV +AE S LP S +P E K + G + R + D
Sbjct: 209 DRMVLVGTGGVDHQSLVKLAEKHFSSLPVSANPLALGRLSSERKPTFVGSEARIR---DD 265
Query: 309 QLTHFVLAFELPG-GWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFP 367
+L +A + G GW D + V+Q + G++ + S +++
Sbjct: 266 ELPTAHVAIAVEGVGW-SSPDYFPMMVMQSIF---GNWDRSLGASSLLSSRLSHIISSNS 321
Query: 368 QVQSFSAFSNIYNHSGMFGIQGTTGSDF-VSKAIDLAAREL--ISVA-TPGEVDQVQLDR 423
SF +FS Y+ +G++GI + + + + +E +S+A T GEV +R
Sbjct: 322 LANSFMSFSTSYSDTGLWGIYLVSENLMNLDDTLHFTLKEWTRMSIAPTEGEV-----ER 376
Query: 424 AKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQK-LL 482
AK K+ +L++L+ V+EDIGRQ++T G+R V+ V+ DI VAQK L
Sbjct: 377 AKSQLKAGLLLSLDGTTAVAEDIGRQIVTSGKRMTPAQIENAVDAVSVDDIKRVAQKYLW 436
Query: 483 SSPLTMASYGDVINVPSYDAVSSKFKS 509
+A++G++ + Y + + S
Sbjct: 437 DKDFALAAFGNIDGLKDYGRIRNDMSS 463
>sp|Q00302|MPPB_BLAEM Mitochondrial-processing peptidase subunit beta OS=Blastocladiella
emersonii GN=MPP1 PE=3 SV=1
Length = 465
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 216/435 (49%), Gaps = 17/435 (3%)
Query: 78 KTKISTLPNGVKIASETSVS-PVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRS 136
KT+++ LPNG+ +A+E++ + A++ +++ GS E+ + G H LE ++F+ T+ R+
Sbjct: 34 KTQVTRLPNGLTVATESNPALATATVGVWIDSGSRAETKANNGVAHFLEHISFKGTKQRT 93
Query: 137 HLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQL 196
+ E+E +GG++ A SREQ Y V + V +L D ++N ++ +
Sbjct: 94 QSGLEIEIENMGGHLNAYTSREQTVYYAKLFSQDVAKGVNILGDILQNSTLDPGAIDRER 153
Query: 197 TKVKSEISEVSNNPQSLLLEAIHSAGY-SGALANPLLAPESAINRLNSTLLEEFVAENYT 255
+ E EV + ++ + +H+A + AL +L P+ I L+ L+ ++ NYT
Sbjct: 154 AVILREAEEVDKQVEEVVFDHLHAAAFPENALGYTILGPKENIQTLSQADLQAYIKNNYT 213
Query: 256 GPRMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREE-PKSVYTGGDYRCQADSGDQLT-H 312
RMV+ +G V+H +L +AE LP + + + +TG D R + D D T H
Sbjct: 214 ADRMVVVGAGNVDHAELCKLAETNFGKLPQGSGKAKFVRPAFTGSDVRIRVD--DMPTAH 271
Query: 313 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSF 372
LA E G D L V ++ GS+ G S +++ + SF
Sbjct: 272 IALAVE--GASWTSADHWPLLVASAMI---GSYDRAA-GNAHPSSKLAQIVAKHNLANSF 325
Query: 373 SAFSNIYNHSGMFGIQ-GTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSA 431
++F+ Y+ +G++GI + D + RE + +AT +V + AKQ K++
Sbjct: 326 TSFNTTYSDTGLWGIYIQSNNRDNLDDLAHFTVREWMRLATAPSEGEVAI--AKQQLKTS 383
Query: 432 ILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLL-SSPLTMAS 490
+L+ L+ V+E+IGRQ+L YG R + V+ VT +D+ VA + + L + +
Sbjct: 384 LLLALDGTTPVAEEIGRQMLAYGRRLSPFEIDRLVDAVTVEDVKRVANEFIYDRDLAIVA 443
Query: 491 YGDVINVPSYDAVSS 505
G V +P Y+ + S
Sbjct: 444 VGPVECLPDYNRIRS 458
>sp|Q9P7X1|MPPB_SCHPO Probable mitochondrial-processing peptidase subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=qcr1 PE=2 SV=1
Length = 457
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 218/445 (48%), Gaps = 32/445 (7%)
Query: 78 KTKISTLPNGVKIASETS-VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRS 136
KT+ +TL NG+ +A+E + A++ + V GS E+ + G H LE +AF+ T+NRS
Sbjct: 21 KTETTTLKNGLTVATEHHPYAQTATVLVGVDAGSRAETAKNNGAAHFLEHLAFKGTKNRS 80
Query: 137 HLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQL 196
+ E E G ++ A SREQ Y A K VP V +L D + N V +
Sbjct: 81 QKALELEFENTGAHLNAYTSREQTVYYAHAFKNAVPNAVAVLADILTNSSISASAVERER 140
Query: 197 TKVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYT 255
+ E EV ++ + +H+ Y G L +L P+ I L L +++ +NY
Sbjct: 141 QVILREQEEVDKMADEVVFDHLHATAYQGHPLGRTILGPKENIESLTREDLLQYIKDNYR 200
Query: 256 GPRMVLAASG-VEHDQLVSVAEPLLSDL-PSIH------PRE-EPKSVYTGGDYRCQADS 306
RM+++++G + H++LV +AE L PS PR +P+ + G + R + D
Sbjct: 201 SDRMIISSAGSISHEELVKLAEKYFGHLEPSAEQLSLGAPRGLKPR--FVGSEIRARDDD 258
Query: 307 GDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF 366
+A + G K D T V+Q ++G A G + SRL ++ +
Sbjct: 259 SPTAN---IAIAVEGMSWKHPDYFTALVMQAIIGNWD--RAMGASPHLSSRL-STIVQQH 312
Query: 367 PQVQSFSAFSNIYNHSGMFGIQGTTGS-----DFVSKAIDLAARELISVATPGEVDQVQL 421
SF +FS Y+ +G++GI T + D V + AR ++VAT EV
Sbjct: 313 QLANSFMSFSTSYSDTGLWGIYLVTENLGRIDDLVHFTLQNWAR--LTVATRAEV----- 365
Query: 422 DRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKL 481
+RAK ++++L++L+S ++EDIGRQ+LT G R + + +T KD+A VA ++
Sbjct: 366 ERAKAQLRASLLLSLDSTTAIAEDIGRQLLTTGRRMSPQEVDLRIGQITEKDVARVASEM 425
Query: 482 L-SSPLTMASYGDVINVPSYDAVSS 505
+ + +++ G + + Y+ + S
Sbjct: 426 IWDKDIAVSAVGSIEGLLDYNRIRS 450
>sp|Q54F93|MPPA2_DICDI Mitochondrial-processing peptidase subunit alpha-2 OS=Dictyostelium
discoideum GN=mppA2 PE=1 SV=1
Length = 445
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 212/436 (48%), Gaps = 25/436 (5%)
Query: 82 STLPNGVKIASETS--VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLR 139
+TL NG+K+ S P S+ LY+ GS E+ + G +L+ +AF S N+ +
Sbjct: 25 TTLSNGLKVVSLVGGYTGPAVSLGLYIKTGSRNETQETAGLNQVLKGLAFESNTNKLGIE 84
Query: 140 IVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKV 199
+ R++E G A ASR+ + + L +M+ L + + P EV + +
Sbjct: 85 VQRDIEVSGSTAFAQASRDNLLIALQTLPNRSLQMLNNLANITK-PTLPYHEVRDVTEII 143
Query: 200 KSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPR 258
E +++ S + E++H + G L PL+AP + + + +V Y
Sbjct: 144 VKESEAYNHDSYSSIFESVHQTAFRGKTLGRPLVAPICNLGNITKDAVTNWVNSTYKPSN 203
Query: 259 MVLAASGVEHDQLVSVAEPLL--SDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 316
M+L G+ H++L+ AE + +D S E Y GG+ + SG+ + VLA
Sbjct: 204 MILVGVGLSHNELIEEAEKVTFGNDESSTSISNETAQ-YIGGE-SLKYSSGN--SKVVLA 259
Query: 317 FELPGGWHKD-KDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAF 375
FE G + KD +VLQ +LG G +A PG G SRL+ N V S AF
Sbjct: 260 FE--GTAQSNIKDVAAFSVLQSILGNGCPKTA--PGHGRTSRLFSLTKNNSNIVNS-EAF 314
Query: 376 SNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVA-TPGEVDQVQLDRAKQSTKSAILM 434
+ Y SG+FG+ V K + L E+++ + T G+ +L+RAK TKS++L
Sbjct: 315 NLTYGDSGLFGVVAEVEGATVGKTVSLITSEIVAASKTAGQ----ELERAKAVTKSSVLE 370
Query: 435 NLESRMVVSEDIGRQVLTYGER--KPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 492
ESR E IG+Q + Y ++ P E F + + VT++DI VA+K+ S T+ G
Sbjct: 371 QAESRTSALEFIGKQAI-YTDKVLTPAE-FAEEISKVTSEDIKRVAKKMTSKKPTLVVVG 428
Query: 493 DVINVPSYDAVSSKFK 508
DV + P+ ++V S+ K
Sbjct: 429 DVSDAPTIESVQSQLK 444
>sp|Q4UML9|Y338_RICFE Uncharacterized zinc protease RF_0338 OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0338 PE=3 SV=1
Length = 412
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 199/418 (47%), Gaps = 25/418 (5%)
Query: 81 ISTLPNGVKIASET--SVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
IS L NG+ + + V VA I+L GS YE+ G +H LE MAF+ T R+
Sbjct: 7 ISKLKNGLTVLTYNMPYVDSVA-INLITKVGSRYENSEEEGISHFLEHMAFKGTTTRTAK 65
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTK 198
+I E + IGG+ A E+ Y L + + +L D ++N +F + E+ ++
Sbjct: 66 QIAEEFDEIGGHFNAYTGHEKTIYYARVLSENCDKALNILADIIQNSIFAEEEIAKEYQV 125
Query: 199 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 257
+ EI+ +NP L+ E +S+ Y L P+L ++ F+ ++Y
Sbjct: 126 ILQEIAHSQDNPDDLIYEKFYSSVYKDQPLGKPILGASKTLSSFTKEHFLSFIDKHYNAG 185
Query: 258 RMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 316
+ L+ +G V+HD++VS AE L S L + Y GG+ D + T +L
Sbjct: 186 NLYLSVAGNVDHDKIVSSAERLFSSLKQGEKSNFLPAKYIGGNSFINKDL--EQTTLILG 243
Query: 317 FELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFS 376
FE G + + + + T L ++ GG GM SRL++ + + + +++
Sbjct: 244 FE--GTPYINLERLYRTQLLAIIFGG----------GMSSRLFQHIREKLGLAYAVGSYN 291
Query: 377 NIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATP--GEVDQVQLDRAKQSTKSAILM 434
+ Y+ SG+F I +T D ++L +EL + T +V++ ++ RAK +S +LM
Sbjct: 292 STYSDSGVFTIYASTAHD----KLELLYKELKTEITKMTEKVNEEEMIRAKTQLRSNLLM 347
Query: 435 NLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 492
E SE+IG+ +G+ P E ++ + + A DI + A K+ SS T A G
Sbjct: 348 AQEKVAYKSEEIGKNYAAFGKYIPPEEIMEIITNIKADDIINTANKIFSSITTSAIIG 405
>sp|Q1RJ61|Y522_RICBR Uncharacterized zinc protease RBE_0522 OS=Rickettsia bellii (strain
RML369-C) GN=RBE_0522 PE=3 SV=1
Length = 412
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 193/418 (46%), Gaps = 25/418 (5%)
Query: 81 ISTLPNGVKIASET--SVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
+S L NG+ I + V+ VA I+L GS YE+P G H LE MAF+ T+ R+
Sbjct: 7 VSKLKNGLTILTYNMPYVNSVA-INLIAKVGSRYENPGEEGIAHFLEHMAFKGTKTRTAK 65
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTK 198
+I E ++IGG+ A E+ Y L + + ++ D V+N F + E+ ++
Sbjct: 66 QIAEEFDSIGGHFNAYTGHEKTVYYSRVLSENCNKALAIIADIVQNSAFAEEEIAKEYQV 125
Query: 199 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 257
+ EI+ +NP L+ E +++ + L P+L I N +F ++Y
Sbjct: 126 ILQEIAHAQDNPDDLVYEKFYNSVFKDQPLGKPILGTSKTIETFNRDHFLKFTGKHYNAE 185
Query: 258 RMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 316
L+ +G V+H+++V AE L S L + Y GG D + T +L
Sbjct: 186 NFYLSIAGNVDHEEIVKEAERLFSSLTQGEKSNFSPAKYIGGHSFINKDL--EQTTLILG 243
Query: 317 FELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFS 376
FE G + + + + T L ++ GG GM SRL++ + + + +++
Sbjct: 244 FE--GTSYINLERLYQTQLLAIIFGG----------GMSSRLFQHIREKLGLAYAVGSYN 291
Query: 377 NIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVAT--PGEVDQVQLDRAKQSTKSAILM 434
+ Y SG+F I +T D ++L A EL + +V Q +++RA+ +S + M
Sbjct: 292 SPYFDSGVFTIYASTAHD----KLELLAAELKNEIKRMAEQVKQEEIERARTQIRSNLQM 347
Query: 435 NLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 492
E SE+IG+ +G+ E ++ + + A DI A ++ SS T A G
Sbjct: 348 AQEKVAYKSEEIGKNYAVFGKYISPEEIMEIIMNIKAADIIQTANRIFSSSATSAVIG 405
>sp|P23955|MPPA_NEUCR Mitochondrial-processing peptidase subunit alpha OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=mpp PE=1 SV=2
Length = 577
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 119/206 (57%), Gaps = 1/206 (0%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+ I+TL NGV++ASE + + +Y+ GS YE+ G +H+++R+AF+ST R+
Sbjct: 51 RDNITTLSNGVRVASEDLPDAFSGVGVYIDAGSRYENDYVRGASHIMDRLAFKSTSTRTA 110
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
++ VE +GGN+Q ++SRE M Y +P VEL+ + +R+P D E+ Q+
Sbjct: 111 DEMLETVEKLGGNIQCASSRESMMYQAATFNKAIPTAVELMAETIRDPKLTDEELEGQIM 170
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGY-SGALANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E++E+ + + +L E +H A + L NPLL P+ ++ +N +++ + Y
Sbjct: 171 TAQYEVNEIWSKAELILPELVHMAAFKDNTLGNPLLCPKERLDYINRDVIQTYRDAFYRP 230
Query: 257 PRMVLAASGVEHDQLVSVAEPLLSDL 282
R+V+A +GV H++ V +AE D+
Sbjct: 231 ERLVVAFAGVPHERAVKLAEKYFGDM 256
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 310 LTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQV 369
TH LAFE G D D L LQ LLGGGGSFSAGGPGKGMYSRLY VLN+ V
Sbjct: 356 FTHIQLAFE--GLAISDDDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTNVLNQHGWV 413
Query: 370 QSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATP---GEVDQVQLDRAKQ 426
+S AF++ Y SG+FGI + + + REL ++ T + ++++ RAK
Sbjct: 414 ESCVAFNHSYTDSGLFGIAASCYPGRTLPMLQVMCRELHALTTDHGYSALGELEVSRAKN 473
Query: 427 STKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLL 482
+S++LMNLESRMV ED+GRQV +G + PV + + +T KD+ VA++++
Sbjct: 474 QLRSSLLMNLESRMVELEDLGRQVQVHGRKIPVREMTRRINELTVKDLRRVAKRVV 529
>sp|P0A5S9|Y2805_MYCBO Uncharacterized zinc protease Mb2805c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb2805c PE=3 SV=1
Length = 438
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 196/421 (46%), Gaps = 27/421 (6%)
Query: 82 STLPNGVKIASE-TSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRI 140
+TLP G+++ +E AS+ ++VG GS E G H LE + F+ST RS + I
Sbjct: 18 TTLPGGLRVVTEFLPAVHSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAVDI 77
Query: 141 VREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVK 200
+ ++A+GG + A ++E Y L + +P V+L+ D V N +V + V
Sbjct: 78 AQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGRCAADDVEVERDVVL 137
Query: 201 SEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGPRM 259
EI+ ++P+ L + +A + + P++ +++ + L+ F YT RM
Sbjct: 138 EEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPERM 197
Query: 260 VLAASG-VEHDQLVSVAEP-----LLSDLPSIHPREEPKSVYTGGDYRCQADSGD-QLTH 312
V+AA+G V+HD LV++ L+ + PR+ V G R S D + TH
Sbjct: 198 VVAAAGNVDHDGLVALVREHFGSRLVRGRRPVAPRKGTGRV--NGSPRLTLVSRDAEQTH 255
Query: 313 FVLAFELPG-GWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQS 371
L PG GW + L+VL LGG G+ SRL++ V S
Sbjct: 256 VSLGIRTPGRGW---EHRWALSVLHTALGG-----------GLSSRLFQEVRETRGLAYS 301
Query: 372 FSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSA 431
+ +++ SG + + + + + A L SVA G + + + AK S +
Sbjct: 302 VYSALDLFADSGALSVYAACLPERFADVMRVTADVLESVARDG-ITEAECGIAKGSLRGG 360
Query: 432 ILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASY 491
+++ LE +GR L YG+ + +EH L+ +E VT +++ +VA+ LLS A
Sbjct: 361 LVLGLEDSSSRMSRLGRSELNYGKHRSIEHTLRQIEQVTVEEVNAVARHLLSRRYGAAVL 420
Query: 492 G 492
G
Sbjct: 421 G 421
>sp|P0A5S8|Y2782_MYCTU Uncharacterized zinc protease Rv2782c/MT2852 OS=Mycobacterium
tuberculosis GN=Rv2782c PE=3 SV=1
Length = 438
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 196/421 (46%), Gaps = 27/421 (6%)
Query: 82 STLPNGVKIASE-TSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRI 140
+TLP G+++ +E AS+ ++VG GS E G H LE + F+ST RS + I
Sbjct: 18 TTLPGGLRVVTEFLPAVHSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAVDI 77
Query: 141 VREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVK 200
+ ++A+GG + A ++E Y L + +P V+L+ D V N +V + V
Sbjct: 78 AQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGRCAADDVEVERDVVL 137
Query: 201 SEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGPRM 259
EI+ ++P+ L + +A + + P++ +++ + L+ F YT RM
Sbjct: 138 EEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPERM 197
Query: 260 VLAASG-VEHDQLVSVAEP-----LLSDLPSIHPREEPKSVYTGGDYRCQADSGD-QLTH 312
V+AA+G V+HD LV++ L+ + PR+ V G R S D + TH
Sbjct: 198 VVAAAGNVDHDGLVALVREHFGSRLVRGRRPVAPRKGTGRV--NGSPRLTLVSRDAEQTH 255
Query: 313 FVLAFELPG-GWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQS 371
L PG GW + L+VL LGG G+ SRL++ V S
Sbjct: 256 VSLGIRTPGRGW---EHRWALSVLHTALGG-----------GLSSRLFQEVRETRGLAYS 301
Query: 372 FSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSA 431
+ +++ SG + + + + + A L SVA G + + + AK S +
Sbjct: 302 VYSALDLFADSGALSVYAACLPERFADVMRVTADVLESVARDG-ITEAECGIAKGSLRGG 360
Query: 432 ILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASY 491
+++ LE +GR L YG+ + +EH L+ +E VT +++ +VA+ LLS A
Sbjct: 361 LVLGLEDSSSRMSRLGRSELNYGKHRSIEHTLRQIEQVTVEEVNAVARHLLSRRYGAAVL 420
Query: 492 G 492
G
Sbjct: 421 G 421
>sp|O86835|Y5738_STRCO Uncharacterized zinc protease SCO5738 OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=SCO5738 PE=3
SV=1
Length = 459
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 193/420 (45%), Gaps = 32/420 (7%)
Query: 77 GKTKISTLPNGVKIASETSVS-PVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNR 135
G + +TLP G++I +ET S A+ ++ GS E+P G TH LE + F+ TR R
Sbjct: 33 GTVRRTTLPGGLRIVTETLPSVRSATFGIWAHVGSRDETPALNGATHYLEHLLFKGTRKR 92
Query: 136 SHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQ 195
S L I ++A+GG + A ++E Y L T +P ++++ D + + + +V+ +
Sbjct: 93 SALDISSAIDAVGGEMNAFTAKEYTCYYARVLDTDLPLAIDVVCDMLTGSLIQEEDVDVE 152
Query: 196 LTKVKSEISEVSNNPQSLLLEAI-HSAGYSGALANPLLAPESAINRLNSTLLEEFVAENY 254
+ EI+ ++P + + H+ AL P+L +N L + + F ++Y
Sbjct: 153 RGAILEEIAMTEDDPGDCVHDLFAHTMFGDNALGRPVLGTVDTVNALTADRIRRFYRKHY 212
Query: 255 TGPRMVLAASG-VEHDQLV-----------SVAEPLLSDLPSIHPREEPKSVYTGGDYRC 302
+V+AA+G V+H+++V ++ +P L PR ++V G
Sbjct: 213 DPTHLVVAAAGNVDHNKVVRQVRAAFEKSGALKDPAAQPLA---PRAGRRTVRAAGRVEL 269
Query: 303 QADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRV 362
+Q H +L +PG D+ + VL LGG GM SRL++ V
Sbjct: 270 IGRKTEQ-AHVILG--MPGLARTDERRWAMGVLNTALGG-----------GMSSRLFQEV 315
Query: 363 LNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLD 422
+ S ++++ + G+FG+ V + + EL VA G D ++
Sbjct: 316 REKRGLAYSVYSYTSGFADCGLFGVYAGCRPSQVHDVLKICRDELDHVAEHGLTDD-EIG 374
Query: 423 RAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLL 482
RA + + ++ LE + IG+ L +GE+ V+ L + VT D+ +VA+ +L
Sbjct: 375 RAVGQLQGSTVLGLEDTGALMNRIGKSELCWGEQMSVDDMLARIASVTPDDVRAVARDVL 434
>sp|P98080|UCR1_CAEEL Cytochrome b-c1 complex subunit 1, mitochondrial OS=Caenorhabditis
elegans GN=ucr-1 PE=3 SV=2
Length = 471
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 218/465 (46%), Gaps = 29/465 (6%)
Query: 51 SSSSPSLDFPLPGVSLPPSLPDYVEPG-KTKISTLPNGVKIASETSVSPVASISLYVGCG 109
S+ P+L+ + S S+ D + + +++TL NG ++ +E + S A++ +++ G
Sbjct: 9 SALRPALNSQVRNASSAVSVKDVLASAPQAEVTTLKNGFRVVTEDNGSATATVGVWIETG 68
Query: 110 SIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKT 169
S +E+ + G H LER+ + T R+ + E+ AIG + + R+Q A
Sbjct: 69 SRFENEKNNGVAHFLERLIHKGTGKRASAALESELNAIGAKLNSFTERDQTAVFVQAGAQ 128
Query: 170 YVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGA-LA 228
V ++V++L D +RN ++ + + E+ + Q +L + +H+AG+ G LA
Sbjct: 129 DVEKVVDILADVLRNSKLEASTIDTERVNLLKELEASDDYHQLVLFDMLHAAGFQGTPLA 188
Query: 229 NPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPR 288
+L +I +++ L+E+ ++Y RMVL+A G + S+A+ DL + +PR
Sbjct: 189 LSVLGTSESIPNISAQQLKEWQEDHYRPVRMVLSAVGGGVSNVSSLADKYFGDLSNEYPR 248
Query: 289 EEPK---SVYTGGDYRCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSF 345
+ P+ + +TG +YR + D + H AF + G + KDA+ L + +G
Sbjct: 249 KVPQVDGTRFTGSEYRYR---NDNVPHMYAAFAVEGVGYAHKDALALQIANQFIGQWDVT 305
Query: 346 SAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDL--- 402
A + SRL +++ ++ V + F+ Y +G+FGI FV+ A DL
Sbjct: 306 HA--TSRTAASRLVQKIGHDHG-VHNLQHFNINYKDTGLFGIY------FVADAHDLNDT 356
Query: 403 ------AARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGER 456
A E +A+ ++V + AK ++ + NLE+ + +++L G
Sbjct: 357 SGIMKSVAHEWKHLASAATEEEVAM--AKNQFRTNLYQNLETNTQKAGFNAKELLYTGNL 414
Query: 457 KPVEHFLKTVEGVTAKDI-ASVAQKLLSSPLTMASYGDVINVPSY 500
+ + ++ V A + ++++ + L G P+Y
Sbjct: 415 RQLSELEAQIQKVDAGAVREAISRHVYDRDLAAVGVGRTEAFPNY 459
>sp|Q92IX7|Y293_RICCN Uncharacterized zinc protease RC0293 OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=RC0293 PE=3 SV=1
Length = 412
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 190/418 (45%), Gaps = 25/418 (5%)
Query: 81 ISTLPNGVKIASET--SVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
+S L NG+ I + V+ VA I+L G+ YE+ G +H LE MAF+ T+ R+
Sbjct: 7 VSKLKNGLTILTYNMPYVNSVA-INLIAKVGARYENAEEDGISHFLEHMAFKGTKTRTAK 65
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTK 198
+I +AIGG+ A E Y L + + +L D ++N +F D E+ ++
Sbjct: 66 QIAEAFDAIGGHFNAYTGHENTVYYARVLSENCDKALNILADIIQNSIFSDEEIAKEYQV 125
Query: 199 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 257
+ EI+ +NP L+ E ++ Y L +L + F+ + Y
Sbjct: 126 IMQEIAHHQDNPDDLVYEKFYNKVYREQPLGKSILGTAKTLATFTKEHFFNFIDKYYNAA 185
Query: 258 RMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 316
+ L+ +G ++HD++V +AE L S L + Y GG+ + + T VL
Sbjct: 186 NLYLSIAGNIDHDKIVIIAEQLFSSLKQGVKSSFIPAKYIGGNGFINKEL--EQTSLVLG 243
Query: 317 FELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFS 376
FE G + + + + T L ++ GG GM SRL++ + + + +++
Sbjct: 244 FE--GTSYINLEKLYQTHLLSIIFGG----------GMSSRLFQSIREKLGLAYAVGSYN 291
Query: 377 NIYNHSGMFGIQGTTGSDFVSKAIDLAARELIS--VATPGEVDQVQLDRAKQSTKSAILM 434
+ Y SG+F I +T D ++L +E+ + + +V ++ RAK +S + M
Sbjct: 292 SAYFDSGVFTIYASTAHD----KLELLYKEIKNEIIKMTEQVSTEEILRAKTQLRSNLQM 347
Query: 435 NLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 492
E SE+IG+ +G+ E ++ + + A DI + A K+ S T A G
Sbjct: 348 AQEKNTYKSEEIGKNYSVFGQYISPEEIMEIIMSIKADDIINTANKIFSGTTTSAIIG 405
>sp|O32965|Y855_MYCLE Uncharacterized zinc protease ML0855 OS=Mycobacterium leprae
(strain TN) GN=ML0855 PE=3 SV=1
Length = 445
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 191/420 (45%), Gaps = 25/420 (5%)
Query: 82 STLPNGVKIASE-TSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRI 140
+TLP G+++ +E AS+ ++VG GS E G H LE + F+ST R+ + I
Sbjct: 25 TTLPGGLRVVTEHLPAVRSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTSTRTAMDI 84
Query: 141 VREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVK 200
+ ++A+GG + A ++E Y L + + V+L+ D V N +V + V
Sbjct: 85 AQAIDAVGGELNAFTAKEHTCYYAHVLDSDLELAVDLVADVVLNGRCAVDDVELERDVVL 144
Query: 201 SEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGPRM 259
EI+ ++P+ L + +A + + P++ +++ + T L F YT RM
Sbjct: 145 EEIAMRDDDPEDALGDMFLAALFGDHPVGRPVIGTMESVSAMTRTQLHSFHVRRYTPERM 204
Query: 260 VLAASG-VEHDQLVSVAEP-----LLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHF 313
V+A +G V+HD++V++ L+ S PR+ + GG + TH
Sbjct: 205 VVAVAGNVDHDEMVALVREHFGSRLIRGRQSAPPRKSTGRI-NGGPALTLGKRDAEQTHV 263
Query: 314 VLAFELPG-GWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSF 372
+L PG W + L+VL LGG G+ SRL++ + S
Sbjct: 264 LLGVRTPGRSW---EHRWALSVLHTALGG-----------GLSSRLFQEIRETRGLAYSV 309
Query: 373 SAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAI 432
+ +I+ SG + + + + + L SVA G + + + AK S + I
Sbjct: 310 YSALDIFADSGALSVYAACLPGRFADVMQVISEVLASVAGDG-ITEAECRIAKGSLRGGI 368
Query: 433 LMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 492
++ LE +GR L YG+ + +EH L+ ++ VT + + ++A +LL+ A G
Sbjct: 369 ILGLEDSNSWMSRLGRSELNYGKYRGIEHTLQQIDEVTVEQVNALAHQLLNKRYGAAVLG 428
>sp|O05945|Y219_RICPR Uncharacterized zinc protease RP219 OS=Rickettsia prowazekii
(strain Madrid E) GN=RP219 PE=3 SV=1
Length = 412
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 187/418 (44%), Gaps = 25/418 (5%)
Query: 81 ISTLPNGVKIASET--SVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
+S L NG+ I + V VA I+L G+ YE+ G +H LE MAF+ T+ R+
Sbjct: 7 VSKLKNGLTILTYNMPYVHSVA-INLIAKVGARYENEEEEGISHFLEHMAFKGTKTRTAQ 65
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTK 198
+I E ++IGG A E Y L + + +L D ++N +F D E+ ++
Sbjct: 66 QIAEEFDSIGGYFNAYTGHENTVYYARVLSENCHKALNILADIIQNSIFADEEIAKEYQI 125
Query: 199 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 257
+ EI+ +NP L+ E ++ Y G L +L + F+ ++Y
Sbjct: 126 IMQEIAHHHDNPDDLIYETFYNTVYKGQPLGKSILGTTKTLVTFTKEHFLNFIGKHYNAE 185
Query: 258 RMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 316
+ L+ +G +EH+++V +AE L + L + Y GG + + T VL
Sbjct: 186 NLYLSIAGNIEHNKIVMIAEELFASLKQGVKSSFIPAKYIGGKGFIHKEL--EQTSLVLG 243
Query: 317 FELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFS 376
FE + + T +L ++ GG GM SRL++ + + +++
Sbjct: 244 FECTSYINLGQLYQTY-LLSIIFGG-----------GMSSRLFQSIREKLGLAYVVGSYN 291
Query: 377 NIYNHSGMFGIQGTTGSDFVSKAIDLAARELIS--VATPGEVDQVQLDRAKQSTKSAILM 434
+ Y SG+F I +T + ++L RE+ + + V ++ RAK +S + M
Sbjct: 292 SAYFDSGVFTIYASTAHN----KLELLYREIKNEIIKITETVSTEEIIRAKMQLRSNLQM 347
Query: 435 NLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 492
E SE+IG+ +G+ E ++ + + A DI + A K+ S T+A G
Sbjct: 348 AQEQNTYKSEEIGKNYSVFGKYILPEEIIEIITNIRADDIINTANKIFSGTTTLAIIG 405
>sp|Q68XF0|Y210_RICTY Uncharacterized zinc protease RT0210 OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=RT0210 PE=3 SV=1
Length = 412
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 185/416 (44%), Gaps = 21/416 (5%)
Query: 81 ISTLPNGVKIASET--SVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
IS L NG+ I + V VA I+L G+ YE+ G +H LE MAF+ T+ R+
Sbjct: 7 ISKLKNGLTILTYNMPYVHSVA-INLIAKVGARYENEEEEGISHFLEHMAFKGTKTRTAQ 65
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTK 198
+I E ++IGG A E Y L + + +L D ++N +F D E++++
Sbjct: 66 QIAEEFDSIGGYFNAYTGYENTVYYVRVLSENCHKALNILADIIQNSIFADEEISKEYQI 125
Query: 199 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 257
+ EI+ +NP L+ E ++ Y L +L + + F+ ++Y
Sbjct: 126 IMQEIAHHHDNPDDLIYETFYNTVYKDQPLGKSILGTAKTLVKFTQEHFLNFIGKHYNAE 185
Query: 258 RMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 316
+ L+ +G +EH+++V +AE L + L + Y GG + + T VL
Sbjct: 186 NLYLSIAGNIEHNKIVIIAEELFASLKQGVTSSFIPAKYIGGKGFIHKEL--EQTSLVLG 243
Query: 317 FELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFS 376
FE + +K T +L ++ GGG S SRL++ + + +++
Sbjct: 244 FECTSYINLEKLYQTY-LLSIIFGGGVS-----------SRLFQSIREKLGLAYVVGSYN 291
Query: 377 NIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNL 436
+ Y SG+F I +T + + E+I + V +L RAK +S + M
Sbjct: 292 SAYFDSGVFTIYASTAHEKLELLYSEIKNEIIKITET--VSTEELMRAKIQLRSNLQMAQ 349
Query: 437 ESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 492
E SE+IG+ +G+ E ++ + + A DI + A K+ S +A G
Sbjct: 350 EQNSYKSEEIGKNYSVFGKYILPEEIIEIITNIKADDIINTANKIFSGTTALAIIG 405
>sp|Q86A84|MPPA1_DICDI Mitochondrial-processing peptidase subunit alpha-1 OS=Dictyostelium
discoideum GN=mppA1 PE=1 SV=1
Length = 654
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 122/235 (51%), Gaps = 8/235 (3%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
K +ISTLPNG+++ S+ + V +I LY+ G+ YESP G +LLE+M F+ T+N S
Sbjct: 143 KAEISTLPNGIRVVSKQTHEGVCAIGLYINAGTKYESPQDRGVFNLLEKMTFKETKNNST 202
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
I++E+E I N AS+SRE + S + L+ + ++ +L D +++P + + E+ EQ+
Sbjct: 203 SEIIKELEEISMNAMASSSREMINVSLEVLRKDLEFVLSILSDQIKSPTYSEEELREQIE 262
Query: 198 KVKSEISEVSN-NPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYT 255
++N + L+ E + + A L N ++A + L + + + Y
Sbjct: 263 VCIRNYEMITNSSSDQLMTEILMGVAFGDAGLGNLVIATPEQYQNITREKLFDALRKYYV 322
Query: 256 GPRMVLAASGVEHDQLVSVAEPLLSDLPSIH---PREEPKS---VYTGGDYRCQA 304
G +V++ +G EH Q++ + + D+P P E+ Y GG C A
Sbjct: 323 GKNIVISVTGAEHSQVIELVDKYFGDIPFTQKDTPSEDSIDSTITYKGGTDACVA 377
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 96/160 (60%), Gaps = 2/160 (1%)
Query: 325 KDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGM 384
++KD + VLQ LLGGG S+S GGPGKGM SRL V+ +V++ AF ++N +
Sbjct: 463 ENKDIINGLVLQSLLGGGSSYSTGGPGKGMQSRLNLNVVYSSHRVKNCHAFLFVFNKVSL 522
Query: 385 FGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSE 444
FGI TT S F+ I+L +EL+ + + + Q +L+RAK+S KS IL NLE R V +
Sbjct: 523 FGISLTTQSGFLQDGIELVLQELLMLRSS--MTQQELERAKRSQKSQILQNLEMRSVQCD 580
Query: 445 DIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSS 484
D+ R +L++G K E K ++ VT DI + KL S
Sbjct: 581 DMARHILSFGSYKSPEQICKLIDSVTLDDIKKLISKLAQS 620
>sp|Q04805|YMXG_BACSU Uncharacterized zinc protease YmxG OS=Bacillus subtilis (strain
168) GN=ymxG PE=3 SV=3
Length = 409
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 191/430 (44%), Gaps = 33/430 (7%)
Query: 80 KISTLPNGVKIASET--SVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
K T NGV+I E +V VA I +++G GS +E+P G +H LE M F+ T +S
Sbjct: 3 KRYTCQNGVRIVLENNPTVRSVA-IGVWIGTGSRHETPEINGISHFLEHMFFKGTSTKSA 61
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
I + IGG V A S+E Y L + +++L D + F + E+ ++
Sbjct: 62 REIAESFDRIGGQVNAFTSKEYTCYYAKVLDEHANYALDVLADMFFHSTFDENELKKEKN 121
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTG 256
V EI + P ++ + + A Y +L P+L E + N L +++ + YT
Sbjct: 122 VVYEEIKMYEDAPDDIVHDLLSKATYGNHSLGYPILGTEETLASFNGDSLRQYMHDYYTP 181
Query: 257 PRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDY------RCQADSGDQL 310
R+V++ +G ++++ + D+ E K TG + + +
Sbjct: 182 DRVVISVAG-------NISDSFIKDVEKWFGSYEAKGKATGLEKPEFHTEKLTRKKETEQ 234
Query: 311 THFVLAFE-LPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQV 369
H L F+ L G + D L VL +LGG M SRL++ V +
Sbjct: 235 AHLCLGFKGLEVGHERIYD---LIVLNNVLGG-----------SMSSRLFQDVREDKGLA 280
Query: 370 QSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTK 429
S ++ + Y SGM I G TG++ + + + L ++ G + +L+ +K+ K
Sbjct: 281 YSVYSYHSSYEDSGMLTIYGGTGANQLQQLSETIQETLATLKRDG-ITSKELENSKEQMK 339
Query: 430 SAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMA 489
+++++LES G+ L G+ K ++ + + V + + +A++L + +A
Sbjct: 340 GSLMLSLESTNSKMSRNGKNELLLGKHKTLDEIINELNAVNLERVNGLARQLFTEDYALA 399
Query: 490 SYGDVINVPS 499
N+PS
Sbjct: 400 LISPSGNMPS 409
>sp|O60044|QCR2_NEUCR Cytochrome b-c1 complex subunit 2, mitochondrial OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=qcr-2 PE=2 SV=2
Length = 454
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 183/418 (43%), Gaps = 24/418 (5%)
Query: 87 GVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEA 146
GVK+AS P +++ G+ YE P+ G T LE AF++T R+ LRI RE E
Sbjct: 46 GVKVASRDDSGPTTRLAVVAKAGTRYE-PLP-GLTVGLEEFAFKNTNKRTALRITRESEL 103
Query: 147 IGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEV 206
+GG +QA +RE + L+ +P ELL + + + E +E + E +
Sbjct: 104 LGGQLQAYHTREAVVLQASFLREDLPYFTELLAEVISETKYTTHEFHELVENCIHE-KQA 162
Query: 207 SNNPQSLLLEAIHSAGYSGALANPLL----APESAINRLNSTLLEEFVAENYTGPRMVLA 262
+ ++ L+A H+ + L +PL P S+ LN + F Y + +
Sbjct: 163 KLDSAAIALDAAHNVAFHSGLGSPLYPTVDTPTSSY--LNENSVAAFANLAYNKANIAVV 220
Query: 263 ASGVEHDQLVSVAEPLLSDLPSIHP--REEPKSVYTGGDYRCQADSGDQLTHFVLAFELP 320
A G L EP +P+ S Y GG+ R + + + V+AF P
Sbjct: 221 ADGASQAGLEKWVEPFFKGVPATSSGNLNTAASKYFGGEQRVAKNGKNAI---VIAF--P 275
Query: 321 GGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYN 380
G T +VL LLGG + PG +S L + P ++F A + Y+
Sbjct: 276 GASLGVPHPET-SVLVGLLGGVSNIK-WSPG---FSLLAKATAAN-PGAEAF-AHNYAYS 328
Query: 381 HSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRM 440
+G+ IQ T V K A + L ++A G V + L +A K +L E
Sbjct: 329 DAGLLAIQITGKGAAVGKVAVEAVKGLKAIAAGG-VSKEDLTKAIAKAKFNLLSASEVSG 387
Query: 441 VVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVP 498
G +L G+ V LK +EGVTA+ + + A+KLL ++++ GD+ +P
Sbjct: 388 TGLVHAGANLLAGGKPIQVAETLKALEGVTAEKLQAAAKKLLEGKASVSAVGDLHVLP 445
>sp|P78761|QCR2_SCHPO Cytochrome b-c1 complex subunit 2, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=qcr2 PE=2 SV=2
Length = 426
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 176/428 (41%), Gaps = 46/428 (10%)
Query: 87 GVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEA 146
GV A + + S+S+ + GS Y+ G +HLLE+ AF++T RS LRI RE E
Sbjct: 30 GVSFAGRETPTATGSLSVVINAGSRYQPDA--GVSHLLEKFAFKTTEERSALRITRESEL 87
Query: 147 IGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQL---TKVKSEI 203
+GG + +RE + + L Y+ LL + V FL +++ E++ +++SE+
Sbjct: 88 LGGQLSTQITREHIILTARFLNEYLEYYARLLAEVVDATKFLPFQLTEEVLPTARIESEL 147
Query: 204 SEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAA 263
+ + + +H + + N + P SA ++ +++F ++ Y + +
Sbjct: 148 --FREDILRVAMAKLHEKAFHRGIGNEVYLPASASPSISE--IKDFASKAYVKSNFSVIS 203
Query: 264 SGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLAFELPGGW 323
SG + + + + +P P + + + G+ R + + +F L F P
Sbjct: 204 SGPDVQKASDLCAKYFAVIPDGSPLKSAPTKISSGESRVYSKGTN---YFCLGFPAPAAS 260
Query: 324 HKDKDAMTLTVLQMLLGGGGS--FSAG----GPGKGMYSRLYRRVLNEFPQVQSFSAFSN 377
+ L VL +LGG + +S G G S + + S S
Sbjct: 261 PE------LFVLSSILGGDAAVKWSHGNTLLAKAAGTASEYKATAVADLTPYSDASLLSV 314
Query: 378 IYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAI----L 433
+ + S I+ T F A + +S P +V + + AK SA L
Sbjct: 315 VISGSCPKAIKATASESF-------KALKSLSSNIPNDVVKSGIAMAKTKYLSAFEPVTL 367
Query: 434 MNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGD 493
+ + +VS G + F+ + VT I+ V LL+ P + + G+
Sbjct: 368 NAISASSLVSASKGS-----------DAFISGFDKVTPASISKVVSSLLAKPASTVAVGN 416
Query: 494 VINVPSYD 501
+ +P YD
Sbjct: 417 LDVLPYYD 424
>sp|P83782|QCR2_CANAL Cytochrome b-c1 complex subunit 2, mitochondrial OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=QCR2 PE=1
SV=2
Length = 374
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 108/227 (47%), Gaps = 11/227 (4%)
Query: 82 STLPNGVKIASETSVSPVASISLYVG-CGSIYESPISFGTTHLLERMAFRSTRNRSHLRI 140
S++PN VKIA++ S + + +S+ + GS G +HLL + F + +S LR
Sbjct: 11 SSIPNSVKIAAKESATDLTKLSVIINNAGSKTGKS---GVSHLLSKFTFLNNGAKSALRF 67
Query: 141 VREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVK 200
RE E +GG ++ +R+ + + LK +P VE L + V N F E NE +
Sbjct: 68 TRESELLGGTFESKVTRDALILNTTFLKQDLPYYVEALGNVVSNTQFAPHEFNEIVLPTA 127
Query: 201 SEISEVSN-NPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRM 259
+ ++++N NP +E +H + L NPL ES +L + +F E ++G +
Sbjct: 128 NAETKLANANPAFKGVEKLHEITFRRGLGNPLFYNESTPIKLEE--VAQFSKEQFSGENI 185
Query: 260 VLAASGVEHDQLVS-VAEPLLSDLPSIH---PREEPKSVYTGGDYRC 302
+ A G + L V+E LPS + P + +TG + R
Sbjct: 186 SIVAEGANEEDLTKFVSESAFCYLPSSSSNGAKALPTNTFTGQEARV 232
>sp|Q5UPX9|YL233_MIMIV Putative zinc protease L233 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L233 PE=3 SV=1
Length = 440
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/426 (19%), Positives = 183/426 (42%), Gaps = 46/426 (10%)
Query: 83 TLPNGVKIAS--ETSVSPVASISLYVGCGSIYE-SPISFGTTHLLERMAFRSTRNRSHLR 139
TL NG+K+ + P+ ++ YVG GS E G +H LE M F+ T N+S
Sbjct: 7 TLKNGLKLVFVPMNNDIPLVAMGFYVGVGSRNEFGAYKNGISHFLEHMMFKRTTNKSSDE 66
Query: 140 IVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKV 199
+ E+++ G N A + + Y Y+ +++++++D +P F+ ++ + +
Sbjct: 67 LFSELDSTGANYNAITTTQNTCYFLSGNSNYIDKLLDIMLDIFLHPNFVSDDIERERKVI 126
Query: 200 KSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPR 258
E+ ++ PQS + IH + +L+ ++ +I ++ LE+F + Y
Sbjct: 127 MEEMKIRADQPQSSMTYQIHEVYFKNTSLSQKVIGSIESIKNIDKNDLEKFYSTFYRPNN 186
Query: 259 MVLAASG-----VEHDQLVSVAEPLLSD--------------LPSIHPREEPKSVYTGGD 299
+ +G +D++ S E L ++ + ++ + +PK +Y
Sbjct: 187 TIFIMAGNFDVFSVYDKIKSNLEKLTNNNFCTTSYLHEGPIIINNMKKQTKPK-IYLND- 244
Query: 300 YRCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLY 359
C ++ + ++L + M + VL +L GG S SRL
Sbjct: 245 --CLSNKQSIVMITFPIYDLYNTY-----GMEIDVLSKILSGGFS-----------SRLA 286
Query: 360 RRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVAT--PGEVD 417
+ + + S +++ +Y + +F +Q + G++ + + I L +E+ + P +
Sbjct: 287 KILREKTGLTYSQNSYPMVYMGAAIFVVQVSFGTNDILRGIKLVIQEIDKLKKNGPNGIS 346
Query: 418 QVQLDRAKQSTKSAILMN-LESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIAS 476
++ ++ K+ IL N L+ V+S + + + H ++ ++ +D+
Sbjct: 347 DTEMIKSINMIKNGILHNFLDPINVISYFGSNNINNRNYQFDLNHQFDNLDHLSKEDVYQ 406
Query: 477 VAQKLL 482
+ + +L
Sbjct: 407 ITKTIL 412
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,233,578
Number of Sequences: 539616
Number of extensions: 7663168
Number of successful extensions: 20883
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 20502
Number of HSP's gapped (non-prelim): 237
length of query: 510
length of database: 191,569,459
effective HSP length: 122
effective length of query: 388
effective length of database: 125,736,307
effective search space: 48785687116
effective search space used: 48785687116
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)