Query 010447
Match_columns 510
No_of_seqs 261 out of 1469
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 00:38:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010447.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010447hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2067 Mitochondrial processi 100.0 2E-82 4.2E-87 591.7 37.6 432 75-510 21-460 (472)
2 KOG0960 Mitochondrial processi 100.0 6.4E-65 1.4E-69 473.8 39.7 423 77-508 32-463 (467)
3 COG0612 PqqL Predicted Zn-depe 100.0 8.2E-52 1.8E-56 426.4 42.9 410 77-500 15-437 (438)
4 TIGR02110 PQQ_syn_pqqF coenzym 100.0 4E-43 8.6E-48 368.9 41.7 327 81-427 2-345 (696)
5 PRK15101 protease3; Provisiona 100.0 8.7E-42 1.9E-46 384.6 41.1 401 76-495 41-463 (961)
6 KOG2583 Ubiquinol cytochrome c 100.0 9.4E-36 2E-40 279.8 39.0 407 78-503 22-429 (429)
7 PRK15101 protease3; Provisiona 100.0 2.3E-35 5E-40 332.6 40.2 414 53-495 494-930 (961)
8 PTZ00432 falcilysin; Provision 100.0 4.4E-34 9.6E-39 319.1 39.7 389 77-485 90-563 (1119)
9 COG1025 Ptr Secreted/periplasm 100.0 2.7E-28 5.9E-33 254.6 37.9 401 74-494 19-441 (937)
10 KOG0959 N-arginine dibasic con 100.0 1.9E-27 4.2E-32 252.6 37.9 398 77-493 26-445 (974)
11 COG1025 Ptr Secreted/periplasm 99.9 6.9E-24 1.5E-28 221.8 38.2 415 54-494 474-909 (937)
12 COG1026 Predicted Zn-dependent 99.9 6.4E-24 1.4E-28 222.9 30.0 401 78-496 21-460 (978)
13 KOG0959 N-arginine dibasic con 99.9 2.8E-22 6E-27 213.5 38.2 404 53-483 480-909 (974)
14 PF00675 Peptidase_M16: Insuli 99.9 1.5E-21 3.3E-26 170.7 16.7 146 89-234 1-148 (149)
15 COG1026 Predicted Zn-dependent 99.9 2.7E-19 5.8E-24 188.4 32.1 388 80-493 528-957 (978)
16 PF05193 Peptidase_M16_C: Pept 99.9 4.9E-21 1.1E-25 173.2 16.8 174 240-428 1-184 (184)
17 PTZ00432 falcilysin; Provision 99.9 4.2E-19 9.1E-24 199.3 32.4 390 83-499 664-1108(1119)
18 KOG2019 Metalloendoprotease HM 99.9 6.8E-19 1.5E-23 175.9 29.4 400 78-494 53-496 (998)
19 KOG0961 Predicted Zn2+-depende 99.9 6.9E-19 1.5E-23 175.6 28.8 385 85-490 27-452 (1022)
20 KOG2019 Metalloendoprotease HM 99.8 1.2E-16 2.7E-21 159.9 29.8 383 82-493 564-984 (998)
21 KOG0961 Predicted Zn2+-depende 99.4 6.5E-11 1.4E-15 119.3 21.3 368 95-483 558-970 (1022)
22 PF08367 M16C_assoc: Peptidase 98.5 2.8E-06 6E-11 80.5 15.2 135 67-204 59-207 (248)
23 PF03410 Peptidase_M44: Protei 98.4 5.5E-06 1.2E-10 81.3 14.9 185 82-288 2-195 (590)
24 PHA03081 putative metalloprote 98.2 2.8E-05 6E-10 76.5 14.3 185 82-288 2-195 (595)
25 COG0612 PqqL Predicted Zn-depe 98.0 0.00027 5.8E-09 73.2 17.2 181 309-507 37-220 (438)
26 TIGR02110 PQQ_syn_pqqF coenzym 97.9 0.0016 3.4E-08 70.2 21.0 166 309-494 20-194 (696)
27 KOG0960 Mitochondrial processi 96.8 0.035 7.5E-07 54.1 13.6 170 309-496 53-225 (467)
28 PF00675 Peptidase_M16: Insuli 96.1 0.31 6.7E-06 42.0 14.5 128 309-456 11-140 (149)
29 KOG2067 Mitochondrial processi 95.1 0.37 8.1E-06 47.3 12.0 162 99-265 264-442 (472)
30 PF05193 Peptidase_M16_C: Pept 85.6 7.2 0.00016 34.0 9.6 108 87-199 67-184 (184)
31 KOG1374 Gamma tubulin [Cytoske 81.2 4.2 9.1E-05 39.9 6.3 171 331-506 118-324 (448)
32 KOG2583 Ubiquinol cytochrome c 77.8 66 0.0014 32.2 13.2 168 305-493 38-209 (429)
33 PF09851 SHOCT: Short C-termin 72.3 7.1 0.00015 23.5 3.4 25 405-429 6-30 (31)
34 COG5023 Tubulin [Cytoskeleton] 65.4 60 0.0013 32.1 9.7 127 346-483 139-295 (443)
35 PF08367 M16C_assoc: Peptidase 53.3 2E+02 0.0043 27.0 14.0 115 309-435 90-209 (248)
36 COG0012 Predicted GTPase, prob 35.4 2.7E+02 0.0059 27.9 9.1 41 351-395 84-124 (372)
37 PRK11032 hypothetical protein; 31.8 87 0.0019 27.2 4.6 38 395-435 25-62 (160)
38 PF05120 GvpG: Gas vesicle pro 29.9 1.5E+02 0.0033 22.4 5.0 38 393-434 30-67 (79)
39 PRK09585 anmK anhydro-N-acetyl 29.0 6.1E+02 0.013 25.5 10.6 102 386-493 182-295 (365)
40 PLN00221 tubulin alpha chain; 29.0 51 0.0011 34.2 3.2 41 330-370 117-165 (450)
41 PF07295 DUF1451: Protein of u 28.8 1.6E+02 0.0034 25.3 5.6 44 393-439 13-56 (146)
42 cd02186 alpha_tubulin The tubu 28.7 62 0.0013 33.4 3.8 24 346-369 140-163 (434)
43 PTZ00010 tubulin beta chain; P 28.6 47 0.001 34.4 2.9 23 346-368 139-161 (445)
44 PTZ00335 tubulin alpha chain; 28.2 55 0.0012 33.9 3.3 40 330-369 117-164 (448)
45 PLN00220 tubulin beta chain; P 26.8 64 0.0014 33.4 3.5 39 331-369 116-162 (447)
46 PF11517 Nab2: Nuclear abundan 24.5 3.5E+02 0.0076 21.3 6.1 44 437-480 28-72 (107)
47 PF01729 QRPTase_C: Quinolinat 24.3 72 0.0016 28.1 2.9 42 236-277 104-147 (169)
48 cd02187 beta_tubulin The tubul 22.8 84 0.0018 32.3 3.4 39 331-369 115-161 (425)
49 PTZ00387 epsilon tubulin; Prov 21.1 1.7E+02 0.0036 30.6 5.2 41 330-370 116-164 (465)
50 KOG3079 Uridylate kinase/adeny 20.2 77 0.0017 28.3 2.1 25 345-370 12-36 (195)
51 cd04922 ACT_AKi-HSDH-ThrA_2 AC 20.2 2.6E+02 0.0056 19.3 4.8 45 139-183 20-65 (66)
52 PF09186 DUF1949: Domain of un 20.2 2.8E+02 0.0061 18.5 6.1 45 138-182 9-53 (56)
53 PLN00222 tubulin gamma chain; 20.1 95 0.002 32.3 3.2 24 346-369 141-164 (454)
54 COG0593 DnaA ATPase involved i 20.1 9.4E+02 0.02 24.6 10.7 118 385-508 235-360 (408)
55 PF14659 Phage_int_SAM_3: Phag 20.1 86 0.0019 21.3 2.1 17 466-482 42-58 (58)
No 1
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-82 Score=591.68 Aligned_cols=432 Identities=49% Similarity=0.770 Sum_probs=411.8
Q ss_pred CCCceEEEEcCCCcEEEEecCCCCeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCChHHHHHHHHHcCCeeeEe
Q 010447 75 EPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQAS 154 (510)
Q Consensus 75 ~~~~~~~~~L~NGl~v~~~~~~~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~ 154 (510)
++..+++++|+||+||+.++++++.++++++|++|+++|.+...|++||+++|+|++|.+++..++...++.+|+++.++
T Consensus 21 ~~~~~kvttL~NGlkvase~~pg~f~~vGlyIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~ei~~~LE~~GGn~~cq 100 (472)
T KOG2067|consen 21 EPSNTKVTTLPNGLKVASENTPGQFCTVGLYIDSGSRYEAKYFSGISHFLERLAFKSTERFSSKEILAELEKLGGNCDCQ 100 (472)
T ss_pred ccccceeeecCCccEEeccCCCCCceEEEEEEecCccccCcCcccHHHHHHHHhhccccCCcHHHHHHHHHHhCCccccc
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecceeEEEEEeccCCChHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHhhcCC-CCCCCCCC
Q 010447 155 ASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLA 233 (510)
Q Consensus 155 ~~~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~l~~~~~~~-~~~~~~~~ 233 (510)
++++.+.|.+++.+++++.++++|.|.+.+|.|++|+++.++..++-|+.+...+|+..+.+.+|.++|.+ .++.|+.+
T Consensus 101 sSRetm~Yaas~~~~~v~sm~~lLadtV~~P~~~d~ev~~~~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~ntlg~pl~c 180 (472)
T KOG2067|consen 101 SSRETMMYAASADSDGVDSMVELLADTVLNPKFTDQEVEEARRAVKYEIEELWMRPEPLLTEMIHSAAYSGNTLGLPLLC 180 (472)
T ss_pred ccHhhhHHHHHhhhcccHHHHHHHHHHHhcccccHHHHHHHHHhhhheccccccCchhhHHHHHHHHHhccCcccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999977 99999999
Q ss_pred ChHHhccCCHHHHHHHHHhhcCCCCeEEEEcCCCHHHHHHHHHhhcCCCCCCCCCC--CCCCccCCCceEEecCC-----
Q 010447 234 PESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPRE--EPKSVYTGGDYRCQADS----- 306 (510)
Q Consensus 234 ~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~Gv~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~----- 306 (510)
+.+.|+.|+.+.|.+|.+.+|+|.||++..|||+||++++++++||+.||+...++ .++.+|+|+...+..+.
T Consensus 181 p~~~i~~I~~~~l~~yl~~~ytp~rmVlA~vGV~heelv~~~~~~~~~~~s~~~p~i~~~~aQYtGG~~~~~~d~~~~~~ 260 (472)
T KOG2067|consen 181 PEENIDKINREVLEEYLKYFYTPERMVLAGVGVEHEELVEIAEKLLGDLPSTKVPPIDESKAQYTGGELKIDTDAPQVTG 260 (472)
T ss_pred ChhhhhhhhHHHHHHHHHhcCChhheEeeecCCCHHHHHHHHHHHhccCCccCCCCcccchhhccccccccCCCCccccC
Confidence 99999999999999999999999999999999999999999999999999865443 35678999976655322
Q ss_pred CCCceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEEeecCCCCcceEE
Q 010447 307 GDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFG 386 (510)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~~~Y~v~a~~~~~~~~~~~~ 386 (510)
..+-+||.++|++++ | +++|.+++.+|+.+||||||||||||||||+||||.++.++++|+|+|.|++..|.++|+|+
T Consensus 261 g~EltHv~lg~Eg~~-~-~deD~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sctAfnhsy~DtGlfg 338 (472)
T KOG2067|consen 261 GPELTHVVLGFEGCS-W-NDEDFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCTAFNHSYSDTGLFG 338 (472)
T ss_pred ccceeeeeEeeccCC-C-CChhHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHhhhhhccccCCceeE
Confidence 126899999999998 6 67899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 010447 387 IQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTV 466 (510)
Q Consensus 387 i~~~~~p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i 466 (510)
|+.+++|+++.++++.+.+++.++.. + ++++|++|||.++++.++++++++...+++++||++.+|.++.++++++.|
T Consensus 339 i~~s~~P~~a~~aveli~~e~~~~~~-~-v~~~el~RAK~qlkS~LlMNLESR~V~~EDvGRQVL~~g~rk~p~e~~~~I 416 (472)
T KOG2067|consen 339 IYASAPPQAANDAVELIAKEMINMAG-G-VTQEELERAKTQLKSMLLMNLESRPVAFEDVGRQVLTTGERKPPDEFIKKI 416 (472)
T ss_pred EeccCCHHHHHHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHHHhcccccchhHHHHhHHHHhccCcCCHHHHHHHH
Confidence 99999999999999999999999987 4 999999999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHhcCCceEEEEcCCCCCCCHHHHHhHhhcC
Q 010447 467 EGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAVSSKFKSK 510 (510)
Q Consensus 467 ~~vT~~di~~~a~~~l~~~~~~~v~G~~~~~p~~~~i~~~~~~~ 510 (510)
+++|++||++++.++|..+++++..||..++|+|+.|.+++..|
T Consensus 417 e~lt~~DI~rva~kvlt~~p~va~~Gd~~~lpt~~~i~~~~~~~ 460 (472)
T KOG2067|consen 417 EQLTPSDISRVASKVLTGKPSVAAFGDGTGLPTYDHIGNAVSSG 460 (472)
T ss_pred HhcCHHHHHHHHHHHhcCCceeccCCcccCCcchhhhhhhcccC
Confidence 99999999999999999999999999999999999999988753
No 2
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.4e-65 Score=473.82 Aligned_cols=423 Identities=31% Similarity=0.576 Sum_probs=396.4
Q ss_pred CceEEEEcCCCcEEEEecCCCCeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCChHHHHHHHHHcCCeeeEeec
Q 010447 77 GKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASAS 156 (510)
Q Consensus 77 ~~~~~~~L~NGl~v~~~~~~~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~ 156 (510)
|++++++|+||++|+.+.+...++++++||++||++|++++.|.+||+|||+|+||++++...+..+++.+|+++|++|+
T Consensus 32 P~t~vttL~NGlrVaTE~~~a~TATVGVwidaGSR~EnekNNG~ahFLEhlaFKGT~~Rs~~alElEieniGahLNAytS 111 (467)
T KOG0960|consen 32 PETEVTTLPNGLRVATEHNSASTATVGVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNRSQAALELEIENIGAHLNAYTS 111 (467)
T ss_pred CcceEEEcCCCcEEEeccCCCcceEEEEEeccCccccccccccHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHhccccc
Confidence 57889999999999999986679999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEeccCCChHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHhhcCC-CCCCCCCCCh
Q 010447 157 REQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPE 235 (510)
Q Consensus 157 ~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~l~~~~~~~-~~~~~~~~~~ 235 (510)
++++.|..+++++++++++++|.|++.|..+.+.+++++|+.+.+|.++...+.+...++++|..+|.+ |++.+++|+.
T Consensus 112 ReqT~yyakal~~dv~kavdiLaDIlqns~L~~s~IerER~vILrEmqevd~~~~eVVfdhLHatafQgtPL~~tilGp~ 191 (467)
T KOG0960|consen 112 REQTVYYAKALSKDVPKAVDILADILQNSKLEESAIERERDVILREMQEVDKNHQEVVFDHLHATAFQGTPLGRTILGPS 191 (467)
T ss_pred ccceeeehhhccccchHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcccccccChh
Confidence 999999999999999999999999999999999999999999999999999999999999999999988 9999999999
Q ss_pred HHhccCCHHHHHHHHHhhcCCCCeEEEEcC-CCHHHHHHHHHhhcCCCCCCCCC----CCCCCccCCCceEEe-cCCCCC
Q 010447 236 SAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLVSVAEPLLSDLPSIHPR----EEPKSVYTGGDYRCQ-ADSGDQ 309 (510)
Q Consensus 236 ~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-v~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~-~~~~~~ 309 (510)
+.|++|+.+||++|.+.||.++||++..+| |+||++.+++++||+.++....+ ..+++.|.|.+++.. ++. |
T Consensus 192 enI~si~r~DL~~yi~thY~~~RmVlaaaGgV~He~lv~la~k~fg~~~~~~~~~~~~~~~~~~FtgsEvR~rdd~l--P 269 (467)
T KOG0960|consen 192 ENIKSISRADLKDYINTHYKASRMVLAAAGGVKHEELVKLAEKYFGDLSKLQTGDKVPLVPPARFTGSEVRVRDDDL--P 269 (467)
T ss_pred hhhhhhhHHHHHHHHHhcccCccEEEEecCCcCHHHHHHHHHHHcCCCcccccCcCCCCCCCccccCceeeecCCCC--c
Confidence 999999999999999999999999999999 99999999999999997753322 224467999999887 556 8
Q ss_pred ceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEEeecCCCCcceEEEEE
Q 010447 310 LTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQG 389 (510)
Q Consensus 310 ~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~~~Y~v~a~~~~~~~~~~~~i~~ 389 (510)
..+++++.++.+ | .++|+.++.|.+.|+|.-.-+-.||+--+ ++|-+.+-+. ++|.++.+|+..|.++|+|++|+
T Consensus 270 ~a~~AiAVEG~~-w-~~pD~~~l~van~iiG~wdr~~g~g~~~~--s~La~~~~~~-~l~~sfqsFnt~YkDTGLwG~y~ 344 (467)
T KOG0960|consen 270 LAHIAIAVEGVS-W-AHPDYFALMVANTIIGNWDRTEGGGRNLS--SRLAQKIQQD-QLCHSFQSFNTSYKDTGLWGIYF 344 (467)
T ss_pred hhheeeeEecCC-c-CCccHHHHHHHHHHhhhhhcccCCccCCc--cHHHHHHHHH-HHHHHHhhhhcccccccceeEEE
Confidence 999999999987 8 88999999999999998776666666655 9999888776 77999999999999999999999
Q ss_pred Ee-CcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Q 010447 390 TT-GSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEG 468 (510)
Q Consensus 390 ~~-~p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 468 (510)
.| ++..++.++..+.++..++.. .+|+.|++|||++++.++...++...-.+++++++++++|...+..++.+.|++
T Consensus 345 V~~~~~~iddl~~~vl~eW~rL~~--~vteaEV~RAKn~Lkt~Lll~ldgttpi~ediGrqlL~~Grri~l~El~~rId~ 422 (467)
T KOG0960|consen 345 VTDNLTMIDDLIHSVLKEWMRLAT--SVTEAEVERAKNQLKTNLLLSLDGTTPIAEDIGRQLLTYGRRIPLAELEARIDA 422 (467)
T ss_pred EecChhhHHHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHhhcCCcCChHHHHHHHhh
Confidence 99 788999999999999999987 499999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhc-CCceEEEEcCCCCCCCHHHHHhHhh
Q 010447 469 VTAKDIASVAQKLLS-SPLTMASYGDVINVPSYDAVSSKFK 508 (510)
Q Consensus 469 vT~~di~~~a~~~l~-~~~~~~v~G~~~~~p~~~~i~~~~~ 508 (510)
||.+||++++.+++- ..+.++.+|+.+.+|+|..|++.|.
T Consensus 423 vt~~~Vr~va~k~iyd~~iAia~vG~ie~lpdy~~irs~m~ 463 (467)
T KOG0960|consen 423 VTAKDVREVASKYIYDKDIAIAAVGPIEGLPDYNRIRSGMS 463 (467)
T ss_pred ccHHHHHHHHHHHhhcCCcceeeecccccCchHHHHhccch
Confidence 999999999999998 7889999999999999999999875
No 3
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=8.2e-52 Score=426.43 Aligned_cols=410 Identities=28% Similarity=0.431 Sum_probs=359.1
Q ss_pred CceEEEEcCCCcEEEEecCC-CCeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCChHHHHHHHHHcCCeeeEee
Q 010447 77 GKTKISTLPNGVKIASETSV-SPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASA 155 (510)
Q Consensus 77 ~~~~~~~L~NGl~v~~~~~~-~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~ 155 (510)
.+++..+|+||+++++.+++ .+.+++.+++++|+..|++...|++||++||+|+|+.+++..++.+.++..|+..|++|
T Consensus 15 ~~~~~~~L~nGl~~~~~~~~~~~~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~~~i~~~~~~~G~~~na~t 94 (438)
T COG0612 15 PGLQVFTLPNGLRVITYPNPTAPTVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPSAELAEAFEKLGGQLNAFT 94 (438)
T ss_pred ccceEEEcCCCCEEEEEeCCCCCEEEEEEEEeecccCCCCCcccHHHHHHHHHccCCCCCChHHHHHHHHHhcCeeeccc
Confidence 45899999999999998888 58999999999999999999999999999999999999888899999999999999999
Q ss_pred cceeEEEEEeccCCChHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHhhcCC-CCCCCCCCC
Q 010447 156 SREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAP 234 (510)
Q Consensus 156 ~~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~l~~~~~~~-~~~~~~~~~ 234 (510)
+.+.+.|.+++.+++++.+|+++.+.+.+|.|++++|+++|..+.+|++....+|...+.+.++..+|++ |+++++.|+
T Consensus 95 s~d~t~y~~~~l~~~~~~~l~llad~l~~p~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~~G~ 174 (438)
T COG0612 95 SFDYTVYYLSVLPDNLDKALDLLADILLNPTFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGT 174 (438)
T ss_pred cchhhhhhhhhchhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988 999999999
Q ss_pred hHHhccCCHHHHHHHHHhhcCCCCeEEEEcC-CCHHHHHHHHHhhcCCCCCCCCC-CCCC-CccCCCceEE-e----cCC
Q 010447 235 ESAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLVSVAEPLLSDLPSIHPR-EEPK-SVYTGGDYRC-Q----ADS 306 (510)
Q Consensus 235 ~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-v~~~~~~~~~~~~~~~l~~~~~~-~~~~-~~~~~~~~~~-~----~~~ 306 (510)
.+.|.+||.++|++||++||+|+||++++|| ++++++..+++++|+.|+....+ ..+. +...+..... . ++.
T Consensus 175 ~e~I~~it~~dl~~f~~k~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (438)
T COG0612 175 EESIEAITREDLKDFYQKWYQPDNMVLVVVGDVDAEEVVELIEKYFGDLPGAAPPPKIPPEPPLGPERVVRVNDPEQPDL 254 (438)
T ss_pred HHHHHhCCHHHHHHHHHHhcCcCceEEEEecCCCHHHHHHHHHHHHccCCccCCCCCCCCccccCCCceEEecCCCCchh
Confidence 9999999999999999999999999999999 99999999999999999972222 2222 2222332222 1 233
Q ss_pred CCCceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEEeecCCCCcceEE
Q 010447 307 GDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFG 386 (510)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~~~Y~v~a~~~~~~~~~~~~ 386 (510)
.++++.++|+.+. +....+++++.+++.+||++ ++||||.++|++.|++|+++++...+.+.+.+.
T Consensus 255 --~~~~~~~g~~~~~-~~~~~~~~~~~l~~~llgg~-----------~~SrLf~~~re~~glay~~~~~~~~~~~~~~~~ 320 (438)
T COG0612 255 --EQAWLALGYPGPD-YDSPDDYAALLLLNGLLGGG-----------FSSRLFQELREKRGLAYSVSSFSDFLSDSGLFS 320 (438)
T ss_pred --hhhhhhccccCcC-cCcchhhHHHHHHHHHhCCC-----------cchHHHHHHHHhcCceeeeccccccccccCCce
Confidence 6788888888886 22223788999999999876 459999999999999999999888888889999
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCCHHHHHH
Q 010447 387 IQGTTGSDFVSKAIDLAARELISVATP--GEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLK 464 (510)
Q Consensus 387 i~~~~~p~~~~~~~~~~~~~l~~l~~~--~~~t~~el~~ak~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (510)
+++.+.+.+..++.+.+.+++..++.. +.+++++++++|..+...+....+++...++.++......+...+.+++.+
T Consensus 321 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~k~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (438)
T COG0612 321 IYAGTAPENPEKTAELVEEILKALKKGLKGPFTEEELDAAKQLLIGLLLLSLDSPSSIAELLGQYLLLGGSLITLEELLE 400 (438)
T ss_pred EEEEecCCChhhHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHhcCCccCHHHHHH
Confidence 999998665555555555555555541 349999999999999999999999999999999988775577788999999
Q ss_pred HHhcCCHHHHHHHHHHHhc-CCceEEEEcCCCCCCCH
Q 010447 465 TVEGVTAKDIASVAQKLLS-SPLTMASYGDVINVPSY 500 (510)
Q Consensus 465 ~i~~vT~~di~~~a~~~l~-~~~~~~v~G~~~~~p~~ 500 (510)
.|++||++||+++|++++. ++.+++++||....+.+
T Consensus 401 ~i~~vt~~dv~~~a~~~~~~~~~~~~~~~p~~~~~~~ 437 (438)
T COG0612 401 RIEAVTLEDVNAVAKKLLAPENLTIVVLGPEKALKDL 437 (438)
T ss_pred HHHhcCHHHHHHHHHHhcCCCCcEEEEEccccccccC
Confidence 9999999999999999999 67999999998876653
No 4
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=4e-43 Score=368.86 Aligned_cols=327 Identities=17% Similarity=0.170 Sum_probs=282.7
Q ss_pred EEEcCCCcEEEEecCC-CCeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCChH-HHHHHHHHcCCeeeEeecce
Q 010447 81 ISTLPNGVKIASETSV-SPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL-RIVREVEAIGGNVQASASRE 158 (510)
Q Consensus 81 ~~~L~NGl~v~~~~~~-~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~~-~l~~~l~~~g~~~~~~~~~~ 158 (510)
.++|+||++|++.+++ .+.+++.++|++|+.+|+++..|++||+|||+|+||++++.. ++.+.++..|+++|++|+.+
T Consensus 2 ~~tL~NGLrVllv~~p~~p~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~le~lGG~lNA~Ts~d 81 (696)
T TIGR02110 2 RITLPNGLRVHLYHQPDAKRAAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWVQRQGGQVNATTLER 81 (696)
T ss_pred eEEcCCCCEEEEEECCCCCEEEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHHHHhCCeEEEEEcCC
Confidence 4789999999987766 479999999999999999999999999999999999999985 79999999999999999999
Q ss_pred eEEEEEeccCCChHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHhhcCC-CCCCCCCCChHH
Q 010447 159 QMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESA 237 (510)
Q Consensus 159 ~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~l~~~~~~~-~~~~~~~~~~~~ 237 (510)
++.|.+++++++++.+|+++.+++.+|.|++++|+++|+.+.+|++...++|...+.+.+.+.+|++ ||+++..|+.++
T Consensus 82 ~T~y~~~v~~~~l~~aL~lLaD~l~~P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt~es 161 (696)
T TIGR02110 82 TTAFFFELPAAALAAGLARLCDMLARPLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGSRDS 161 (696)
T ss_pred eEEEEEEecHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999977 999999999999
Q ss_pred hccCC---HHHHHHHHHhhcCCCCeEEEEcC-CCHHHHHHHHHhhcCCCCCCCCCCCC--CCccCCCceEEe-cCCCCCc
Q 010447 238 INRLN---STLLEEFVAENYTGPRMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEP--KSVYTGGDYRCQ-ADSGDQL 310 (510)
Q Consensus 238 l~~l~---~~~l~~f~~~~~~~~~~~l~i~G-v~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~ 310 (510)
|+.++ .++|++||+++|.|+||+++|+| +++++++++++++|+.|+....+... .+.+......+. .+. ++
T Consensus 162 L~~it~~t~edL~~F~~~~Y~p~NmvLvIvGdvs~eel~~l~e~~f~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~q 239 (696)
T TIGR02110 162 LALPNTAFQQALRDFHRRHYQAGNMQLWLQGPQSLDELEQLAARFGASLAAGGECAQAPPAPLLRFDRLTLAGGSE--PR 239 (696)
T ss_pred HhCcccchHHHHHHHHHHhcchhcEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCceeEEEecCc--ce
Confidence 99876 99999999999999999999999 99999999999999999865543221 122222322222 333 56
Q ss_pred eEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEEeecCCCCc--ceEEEE
Q 010447 311 THFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHS--GMFGIQ 388 (510)
Q Consensus 311 ~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~~~Y~v~a~~~~~~~~--~~~~i~ 388 (510)
.++.+.++... . .+...+.+++.+|+++. .++||.+||+ +|++|+++++. .+.+. +.|.|+
T Consensus 240 ~~l~~~~p~~~--~--~d~~al~lL~~iLg~g~-----------sSrL~~~LRe-~GLaysV~s~~-~~~~~g~~lf~I~ 302 (696)
T TIGR02110 240 LWLLFALAGLP--A--TARDNVTLLCEFLQDEA-----------PGGLLAQLRE-RGLAESVAATW-LYQDAGQALLALE 302 (696)
T ss_pred EEEEEeecCCC--C--CChHHHHHHHHHhCCCc-----------chHHHHHHHH-CCCEEEEEEec-cccCCCCcEEEEE
Confidence 66666666544 2 34446889999999874 4999999997 79999999865 44444 489999
Q ss_pred EEe---CcchHHHHHHHHHHHHHHhhCCC--CCCHHHHHHHHHH
Q 010447 389 GTT---GSDFVSKAIDLAARELISVATPG--EVDQVQLDRAKQS 427 (510)
Q Consensus 389 ~~~---~p~~~~~~~~~~~~~l~~l~~~~--~~t~~el~~ak~~ 427 (510)
+.+ .+++..++++.+.++|.++++ + +++.+|++++|+.
T Consensus 303 ~~lt~~~~~~~~~v~~~i~~~L~~L~~-~~~~~~~eel~rlk~~ 345 (696)
T TIGR02110 303 FSARCISAAAAQQIEQLLTQWLGALAE-QTWAEQLEHYAQLAQR 345 (696)
T ss_pred EEEcCCCccCHHHHHHHHHHHHHHHHh-cCCCCCHHHHHHHHHh
Confidence 987 356889999999999999988 5 7999999999987
No 5
>PRK15101 protease3; Provisional
Probab=100.00 E-value=8.7e-42 Score=384.64 Aligned_cols=401 Identities=13% Similarity=0.123 Sum_probs=330.2
Q ss_pred CCceEEEEcCCCcEEEEecCC-CCeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCC-hHHHHHHHHHcCCeeeE
Q 010447 76 PGKTKISTLPNGVKIASETSV-SPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRS-HLRIVREVEAIGGNVQA 153 (510)
Q Consensus 76 ~~~~~~~~L~NGl~v~~~~~~-~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s-~~~l~~~l~~~g~~~~~ 153 (510)
...++.++|+||++|++.+++ .+.+.+.+++++|+.+|+++..|++||+|||+|+||++++ ..++.+.++.+|+++|+
T Consensus 41 ~~~~~~~~L~NGL~v~l~~~~~~~~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l~~~Gg~~NA 120 (961)
T PRK15101 41 PRQYQAIRLDNGMTVLLVSDPQAVKSLAALALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFLKKHGGSHNA 120 (961)
T ss_pred ccceEEEEeCCCCEEEEEeCCCCcceeEEEEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHHHHhCCCccc
Confidence 457888999999999986665 5799999999999999999999999999999999999996 57999999999999999
Q ss_pred eecceeEEEEEeccCCChHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHhhcCC-CCCCCCC
Q 010447 154 SASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLL 232 (510)
Q Consensus 154 ~~~~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~l~~~~~~~-~~~~~~~ 232 (510)
+|+.+++.|.+++++++++.+|+++.+++.+|.|++++++++|..+.+|++...++|...+.+.+...+|++ ||+++..
T Consensus 121 ~T~~d~T~y~~~~~~~~l~~aL~~~ad~~~~P~f~~~~~erE~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~hp~~~~~~ 200 (961)
T PRK15101 121 STASYRTAFYLEVENDALPPAVDRLADAIAEPLLDPKNADRERNAVNAELTMARSRDGMRMAQVSAETINPAHPGSRFSG 200 (961)
T ss_pred eECCCceEEEEEcCHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhCCCCCCcccCCC
Confidence 999999999999999999999999999999999999999999999999999888899999999998899987 9999999
Q ss_pred CChHHhccC----CHHHHHHHHHhhcCCCCeEEEEcC-CCHHHHHHHHHhhcCCCCCCCCCCC--CCCccC---CCc-eE
Q 010447 233 APESAINRL----NSTLLEEFVAENYTGPRMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREE--PKSVYT---GGD-YR 301 (510)
Q Consensus 233 ~~~~~l~~l----~~~~l~~f~~~~~~~~~~~l~i~G-v~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~---~~~-~~ 301 (510)
|+.++|+.+ +.++|++||++||.|+||+++|+| ++++++.++++++|+.||....+.+ +.+.+. .+. ..
T Consensus 201 G~~etl~~~~~~~~~~~L~~f~~~~Y~p~nm~lvv~G~~~~~~l~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (961)
T PRK15101 201 GNLETLSDKPGSKLQDALVDFYQRYYSANLMKAVIYSNQPLPELAKLAADTFGRVPNKNASVPEITVPVVTDAQKGIIIH 280 (961)
T ss_pred CCHHHhhcCCchHHHHHHHHHHHHhCcccceEEEEEcCCCHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCHHHcCeEEE
Confidence 999999997 699999999999999999999999 9999999999999999987653211 112221 122 22
Q ss_pred EecCCCCCceEEEEEEecCCCCCC-CcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEEeecCC-
Q 010447 302 CQADSGDQLTHFVLAFELPGGWHK-DKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIY- 379 (510)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~~~Y~v~a~~~~~- 379 (510)
..+.. ++..+.+.|..|. .. ..+.....++..+|+++++ +.|+..|+ +.|++|+++++...+
T Consensus 281 ~~~~~--~~~~l~l~~~~p~--~~~~~~~~~~~~l~~ll~~~~~-----------g~l~~~L~-~~gla~~v~s~~~~~~ 344 (961)
T PRK15101 281 YVPAQ--PRKVLRVEFRIDN--NSAKFRSKTDEYISYLIGNRSP-----------GTLSDWLQ-KQGLAEGISAGADPMV 344 (961)
T ss_pred EEECC--CCcEEEEEEecCC--cHHHHhhCHHHHHHHHhcCCCC-----------CcHHHHHH-HcCccceeeecccccc
Confidence 23445 6788899999876 22 1123356789999997643 56776664 789999999886543
Q ss_pred -CCcceEEEEEEeCcc---hHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHHHHhcC
Q 010447 380 -NHSGMFGIQGTTGSD---FVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMN-LESRMVVSEDIGRQVLTYG 454 (510)
Q Consensus 380 -~~~~~~~i~~~~~p~---~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~ 454 (510)
.+.|.|.|++.+.++ +..++++.+.+++..+++ .+++++||+++|+.+...+... ..++...+..+...+. ..
T Consensus 345 ~~~~g~f~i~~~~~~~~~~~~~~v~~~i~~~i~~l~~-~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 422 (961)
T PRK15101 345 DRNSGVFAISVSLTDKGLAQRDQVVAAIFSYLNLLRE-KGIDKSYFDELAHVLDLDFRYPSITRDMDYIEWLADTML-RV 422 (961)
T ss_pred CCCceEEEEEEEcChHHHHhHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHhccccCCCCCChHHHHHHHHHHhh-hC
Confidence 467899999998884 788999999999999998 6799999999999988776432 2334444455555432 22
Q ss_pred CCCCHHHHHHHHhcCCHHHHHHHHHHHhc-CCceEEEEcCCC
Q 010447 455 ERKPVEHFLKTVEGVTAKDIASVAQKLLS-SPLTMASYGDVI 495 (510)
Q Consensus 455 ~~~~~~~~~~~i~~vT~~di~~~a~~~l~-~~~~~~v~G~~~ 495 (510)
.+.........++.+++++|+++++. |. ++..++++++..
T Consensus 423 ~~~~~l~~~~~~~~~~~~~i~~~~~~-l~~~n~~i~~~~~~~ 463 (961)
T PRK15101 423 PVEHTLDAPYIADRYDPKAIKARLAE-MTPQNARIWYISPQE 463 (961)
T ss_pred CHHHheeCchhhhcCCHHHHHHHHhh-cCHhHEEEEEEeCCC
Confidence 22223344577899999999999987 66 888888888753
No 6
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=100.00 E-value=9.4e-36 Score=279.81 Aligned_cols=407 Identities=28% Similarity=0.440 Sum_probs=329.1
Q ss_pred ceEEEEcCCCcEEEEecCCCCeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCChHHHHHHHHHcCCeeeEeecc
Q 010447 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASR 157 (510)
Q Consensus 78 ~~~~~~L~NGl~v~~~~~~~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~~ 157 (510)
..+..+|.||++|...+.+++...+.+.|++||++|+..+.|++|+++...++.|.+++...+.+..+..|+.++..++|
T Consensus 22 ~~~~~kl~ngL~Vas~e~~~~is~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~sal~ivr~se~~GG~Lss~~tR 101 (429)
T KOG2583|consen 22 ISKTTKLVNGLTVASREAPTAISSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQERSALKIVRESEQLGGTLSSTATR 101 (429)
T ss_pred hhhhhccccceEEEeccCCCcceEEEEEEecCccCCccccccHHHHHHHhcccCccccchhhhhhhhHhhCceeeeeeec
Confidence 45567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEeccCCChHHHHHHHHHhhhCCCCCHHHHHHHH-HHHHHHHHHhhCChHHHHHHHHHHhhcCCCCCCCCCCChH
Q 010447 158 EQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQL-TKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPES 236 (510)
Q Consensus 158 ~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k-~~~~~e~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (510)
|.+.+++++++++++..+.+|.+.+.+|.|.+|+++... ..+..++. ..+|+..+.+.+|+.+|.+.++++++.+.-
T Consensus 102 e~~~~tvt~lrd~~~~~l~~L~~V~~~paFkPwEl~D~~~~ti~~~l~--~~t~~~~a~e~lH~aAfRngLgnslY~p~~ 179 (429)
T KOG2583|consen 102 ELIGLTVTFLRDDLEYYLSLLGDVLDAPAFKPWELEDVVLATIDADLA--YQTPYTIAIEQLHAAAFRNGLGNSLYSPGY 179 (429)
T ss_pred ceEEEEEEEecccHHHHHHHHHHhhcccCcCchhhhhhhhhhhHHHhh--hcChHHHHHHHHHHHHHhcccCCcccCCcc
Confidence 999999999999999999999999999999999999988 55554444 688999999999999997788999988888
Q ss_pred HhccCCHHHHHHHHHhhcCCCCeEEEEcCCCHHHHHHHHHhhcCCCCCCCCCCCCCCccCCCceEEecCCCCCceEEEEE
Q 010447 237 AINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 316 (510)
Q Consensus 237 ~l~~l~~~~l~~f~~~~~~~~~~~l~i~Gv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 316 (510)
.+.+++.++|.+|.+++|...|++++.+|+|++.++..+++++ .++........+..+.+++.+..... ...++.++
T Consensus 180 ~vg~vss~eL~~Fa~k~fv~gn~~lvg~nvd~~~L~~~~~~~~-~~~~~~~~k~a~a~~~gGe~Rk~~~g--~~~~v~va 256 (429)
T KOG2583|consen 180 QVGSVSSSELKDFAAKHFVKGNAVLVGVNVDHDDLKQFADEYA-PIRDGLPLKPAPAKYSGGEARKDARG--NRVHVAVA 256 (429)
T ss_pred cccCccHHHHHHHHHHHhhccceEEEecCCChHHHHHHHHHhc-cccCCCCCCCCCccccCCccccccCC--ceeEEEEe
Confidence 8999999999999999999999999999999999999999983 33333322223346778988877666 67777766
Q ss_pred EecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEEeecCCCCcceEEEEEEeCcchH
Q 010447 317 FELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFV 396 (510)
Q Consensus 317 ~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~~~Y~v~a~~~~~~~~~~~~i~~~~~p~~~ 396 (510)
-..-. -.+.+...+..++.+.|+....-.- | .+-|-.-.-...+..-+++++...|.|.|+|++++..+..++
T Consensus 257 gegAA-a~~~k~~~a~av~~~~Lg~~~~~k~---~---t~~~~~aa~~a~~~~~s~sA~~a~ysDsGL~gv~~~~~~~~a 329 (429)
T KOG2583|consen 257 GEGAA-AGNLKVLAAQAVLLAALGNSAPVKR---G---TGLLSEAAGAAGEQGASASAFNAPYSDSGLFGVYVSAQGSQA 329 (429)
T ss_pred cCccc-ccchHHHHHHHHHHHHHhccccccc---c---cchHHHHHhhccccCceeeeecccccCCceEEEEEEecCccH
Confidence 54433 1256888899999999997531000 1 122322222223345567889999999999999999887778
Q ss_pred HHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHH
Q 010447 397 SKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIAS 476 (510)
Q Consensus 397 ~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~~di~~ 476 (510)
.+++......++..+. .+++......+++.++....+..+. .-.....+ .+..-..+.+++.|++||..||++
T Consensus 330 ~~~v~s~v~~lks~~~-~~id~~~~~a~~~~l~~~~~ss~~a---~~~~~~~~---a~~~~~~d~~i~~id~Vt~sdV~~ 402 (429)
T KOG2583|consen 330 GKVVSSEVKKLKSALV-SDIDNAKVKAAIKALKASYLSSVEA---LELATGSQ---ANLVSEPDAFIQQIDKVTASDVQK 402 (429)
T ss_pred HHHHHHHHHHHHHHHh-cCCcchHHHHHHHHHHHHhhcchHH---HHHhhHHH---hcCCCChHHHHHHhccccHHHHHH
Confidence 8888888888888777 5577777777777666655544433 21222222 222225688999999999999999
Q ss_pred HHHHHhcCCceEEEEcCCCCCCCHHHH
Q 010447 477 VAQKLLSSPLTMASYGDVINVPSYDAV 503 (510)
Q Consensus 477 ~a~~~l~~~~~~~v~G~~~~~p~~~~i 503 (510)
++++++..++.++.+|+...+|-+|++
T Consensus 403 a~kk~~s~kls~aA~Gnl~~vPY~DEL 429 (429)
T KOG2583|consen 403 AAKKFLSGKLSLAAYGNLSNVPYLDEL 429 (429)
T ss_pred HHHHhccCcceeeeeccccCCcccccC
Confidence 999999999999999999999988763
No 7
>PRK15101 protease3; Provisional
Probab=100.00 E-value=2.3e-35 Score=332.59 Aligned_cols=414 Identities=10% Similarity=0.079 Sum_probs=326.1
Q ss_pred CCCCCCCCCCCCCCCCCCCC---CCCCCceEEEEcCCCcEEEEecCC----CCeEEEEEEEcccccCCCCCCCcHHHHHH
Q 010447 53 SSPSLDFPLPGVSLPPSLPD---YVEPGKTKISTLPNGVKIASETSV----SPVASISLYVGCGSIYESPISFGTTHLLE 125 (510)
Q Consensus 53 ~~~~l~~pl~~~~~p~~~~~---~~~~~~~~~~~L~NGl~v~~~~~~----~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~ 125 (510)
..+.+++|-+|.++|+++.- ......++.+.++||++||+++++ .|++.+.+.+.+|...+++...|++.|+.
T Consensus 494 ~~~~l~lP~~n~fip~~~~~~~~~~~~~~p~~i~~~~g~~vw~~~d~~f~~~Pk~~i~~~~~~~~~~~~~~~~~l~~L~~ 573 (961)
T PRK15101 494 QNIALSLPELNPYIPDDFSLIKADKAYKHPELIVDEPGLRVVYMPSQYFADEPKADISLVLRNPKAMDSARNQVLFALND 573 (961)
T ss_pred CCccCCCCCCCCccCCCCeeccCCCCCCCCeEEEcCCCeEEEEeCCCccccCCCEEEEEEEeCCCccCCHHHHHHHHHHH
Confidence 34568999999999998421 222345788999999999987665 48999999999999999999999999999
Q ss_pred HhhccCCCCCChHHHHHHHHHcCCeeeEeecceeEEEEEeccCCChHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHH
Q 010447 126 RMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISE 205 (510)
Q Consensus 126 ~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~ 205 (510)
.|+ +.+..++.+..+..|.+++.+ +.+++.+++++++++++.+|+++.+.+.+|.|++++|+++|+.+.+++++
T Consensus 574 ~ll-----~~~l~e~~y~a~~aG~~~~~~-~~~g~~i~v~g~s~~l~~ll~~l~d~l~~~~~~~~~fe~~k~~~~~~l~~ 647 (961)
T PRK15101 574 YLA-----GLALDQLSNQASVGGISFSTN-ANNGLMVNANGYTQRLPQLLQALLEGYFSFTPTEEQLAQAKSWYREQLDS 647 (961)
T ss_pred HHH-----HHHHHHHhchHHhcCcEEEEc-cCCCEEEEEEecChhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhh
Confidence 987 335667778888899999999 79999999999999999999999999999999999999999999999998
Q ss_pred hh-CChHHHHHHHHHHhhcCC-CCCCCCCCChHHhccCCHHHHHHHHHhhcCCCCeEEEEcC-CCHHHHHHHHHhhcCCC
Q 010447 206 VS-NNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLVSVAEPLLSDL 282 (510)
Q Consensus 206 ~~-~~p~~~~~~~l~~~~~~~-~~~~~~~~~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-v~~~~~~~~~~~~~~~l 282 (510)
.. ..|...+...+. .+.+ +|+.+ .++.++|+++|.+++++|++++|.+.+++++|+| ++.+++.++++++++.+
T Consensus 648 ~~~~~~~~~~~~~~~--~~~~~py~~~-~~~~~~l~~it~edl~~f~~~~~~~~~~~~~v~GNi~~~ea~~l~~~~~~~l 724 (961)
T PRK15101 648 AEKGKAYEQAIMPAQ--MLSQVPYFER-DERRKLLPSITLKDVLAYRDALLSGATPEFLVVGNLTEEQVTTLARDVQKQL 724 (961)
T ss_pred hcccCcHHHHHHHHH--HHhcCCCCCH-HHHHHHHhcCCHHHHHHHHHHHHHhceEEEEEEcCCCHHHHHHHHHHHHHHh
Confidence 54 444444433322 3444 77764 5688999999999999999999999999999999 99999999999988877
Q ss_pred CCCCCCC-CC-CCcc-CCCceEEe--cCCCCCceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccH
Q 010447 283 PSIHPRE-EP-KSVY-TGGDYRCQ--ADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSR 357 (510)
Q Consensus 283 ~~~~~~~-~~-~~~~-~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~ 357 (510)
+..+... .. .... .+....+. .+. .+..+.+.|...+ . +.....++..+|+++ |++|
T Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g-~----~~~~~~v~~~lLg~~-----------~ssr 786 (961)
T PRK15101 725 GADGTEWWRGKDVVVDKKQSVNFEKAGSS--TDSALAAVYVPTG-Y----DEYQSSAYSSLLGQI-----------IQPW 786 (961)
T ss_pred ccCCcccccccceEeCCCCeEEEecCCCC--CCCeEEEEEEeCC-C----CCHHHHHHHHHHHHH-----------HhHH
Confidence 6432211 10 0011 12222222 223 4455666664443 1 237778888888876 5699
Q ss_pred HHHHHHhhcCCeEEEEEeecCCCCcceEEEEEEeC---cchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH
Q 010447 358 LYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTG---SDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILM 434 (510)
Q Consensus 358 L~~~lRe~~~~~Y~v~a~~~~~~~~~~~~i~~~~~---p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~ 434 (510)
||++||+++|++|+|+++.....+.+.+.+.++++ |+.+.+.++.+.+++.+... ++|++||+++|+.++.++..
T Consensus 787 lf~~LRtk~qLgY~V~s~~~~~~~~~~~~~~vqs~~~~~~~l~~~i~~f~~~~~~~l~--~lt~eE~~~~k~~l~~~~~~ 864 (961)
T PRK15101 787 FYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPAYLWQRYQAFFPQAEAKLR--AMKPEEFAQYQQALINQLLQ 864 (961)
T ss_pred HHHHHHHHhhhceEEEEEeeccCCeeeEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999988777767777777654 66778888888877655445 49999999999999999999
Q ss_pred hcCChHHHHHHHHHHHHhcCCCC-CHHHHHHHHhcCCHHHHHHHHHHH-hc-CC--ceEEEEcCCC
Q 010447 435 NLESRMVVSEDIGRQVLTYGERK-PVEHFLKTVEGVTAKDIASVAQKL-LS-SP--LTMASYGDVI 495 (510)
Q Consensus 435 ~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~vT~~di~~~a~~~-l~-~~--~~~~v~G~~~ 495 (510)
..++....+.++|..+..++.+. ..+++.+.|++||++||+++++++ +. ++ .++.+.|...
T Consensus 865 ~~~sl~~~a~~~~~~i~~~~~~fd~~~~~~~~i~~vT~edv~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (961)
T PRK15101 865 APQTLGEEASRLSKDFDRGNMRFDSRDKIIAQIKLLTPQKLADFFHQAVIEPQGLAILSQISGSQN 930 (961)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCcChHHHHHHHHHcCCHHHHHHHHHHHhcCCCCCEEEEEeeccCc
Confidence 99999999999999987444444 468899999999999999999998 66 44 3344556543
No 8
>PTZ00432 falcilysin; Provisional
Probab=100.00 E-value=4.4e-34 Score=319.09 Aligned_cols=389 Identities=15% Similarity=0.123 Sum_probs=299.5
Q ss_pred CceEEEEcCCCcEEEEecCCC---CeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCChHHHHHHHHHcC--Cee
Q 010447 77 GKTKISTLPNGVKIASETSVS---PVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIG--GNV 151 (510)
Q Consensus 77 ~~~~~~~L~NGl~v~~~~~~~---~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~~~l~~~l~~~g--~~~ 151 (510)
..+.....+||++|++..++. +...+.++|+.|+. ...|++|++|||+|+|+++++..++...++..| +.+
T Consensus 90 ~~~~~~H~~nGl~vl~~~~~d~~~~~~~f~i~f~T~~~----d~~G~aH~LEH~~f~GS~k~p~~~~~~~l~~~gl~~~l 165 (1119)
T PTZ00432 90 VATVYSHKKTGLQVISLKTNDSSGKEMCFDFYVPTPPH----NDKGIPHILEHSVLSGSKKYNYKDSFSLLVQGGFNSFL 165 (1119)
T ss_pred EEEEEEEcCCCCEEEEEecCCCccceeEEEEEecCCCC----CCcchhHHHHHHHhCCCCCCCcccHHHHHHhcCcCCCc
Confidence 456677788999999766544 37889999999973 457999999999999999999999999998866 779
Q ss_pred eEeecceeEEEEEeccCC-ChHHHHHHHHHhhhCCCCCHHHH--HH---------H--------------------HHHH
Q 010447 152 QASASREQMGYSFDALKT-YVPEMVELLIDCVRNPVFLDWEV--NE---------Q--------------------LTKV 199 (510)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~-~l~~~l~ll~~~~~~p~f~~~~~--~~---------~--------------------k~~~ 199 (510)
|++|+.+++.|.+.+.++ ++..+++++.|.+.+|.|+++++ .+ + +.++
T Consensus 166 NA~T~~D~T~Y~~~~~~e~d~~~~ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kgVV 245 (1119)
T PTZ00432 166 NAYTFKDRTSYLFASTNEKDFYNTADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSGIV 245 (1119)
T ss_pred cccCCCCceEEEeccCCHHHHHHHHHHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhhHH
Confidence 999999999999999886 69999999999999999988763 22 1 6789
Q ss_pred HHHHHHhhCChHHHHHHHHHHhhcCC-CCCCCCCCChHHhccCCHHHHHHHHHhhcCCCCeEEEEcC-CCHHHHHHHHHh
Q 010447 200 KSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLVSVAEP 277 (510)
Q Consensus 200 ~~e~~~~~~~p~~~~~~~l~~~~~~~-~~~~~~~~~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-v~~~~~~~~~~~ 277 (510)
.+|++...++|...+.+.+.+.+| + +|+++..|++++|..+|.+++++||+++|+|+|++++++| ++++++++++++
T Consensus 246 ~~Emk~~~~~p~~~~~~~~~~~lf-~~pY~~~~~G~~~~I~~lt~e~l~~Fh~~~Y~P~N~~l~v~Gdid~~~~l~~l~~ 324 (1119)
T PTZ00432 246 YSEMKKRFSDPLSFGYSVIYQNLF-SNVYKYDSGGDPKDIVELTYEELVEFYKTYYGPKTATVYFYGPNDVTERLEFVDN 324 (1119)
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHh-CCCCCCCCCCChHhhccCCHHHHHHHHHHhcCccceEEEEEcCCCHHHHHHHHHH
Confidence 999999999999999999999999 7 9999999999999999999999999999999999999999 999999999999
Q ss_pred hcCCCCCCCCC------C---CCCC--ccCCCceEEe-----cCCCCCceEEEEE-EecCCCC----------CCCcchH
Q 010447 278 LLSDLPSIHPR------E---EPKS--VYTGGDYRCQ-----ADSGDQLTHFVLA-FELPGGW----------HKDKDAM 330 (510)
Q Consensus 278 ~~~~l~~~~~~------~---~~~~--~~~~~~~~~~-----~~~~~~~~~v~~~-~~~~~~~----------~~~~~~~ 330 (510)
+|+.+|..... . .+.+ .+..+..++. .+. .+.++.++ |..++.. .+.++..
T Consensus 325 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--e~~~l~~~~w~~~p~~~~~~~~~~~~~d~~~~~ 402 (1119)
T PTZ00432 325 YLTKHPKTGQLSHTAYREDADENLLYEEYKDKPKHVKKKFSSHSE--EEENLMSVSWLLNPKHNGSKDYDKSLIDPVDYL 402 (1119)
T ss_pred HHhhcccccccccccccccccccccccccccCCeEEEeccCCCcc--ccccEEEEEEEcCCccccccccccccCCHHHHH
Confidence 99888754211 0 0011 1111112111 223 45666665 9774310 1225789
Q ss_pred HHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEE-EEeecCCCCcceEEEEEE-eCc-------chHHHHHH
Q 010447 331 TLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSF-SAFSNIYNHSGMFGIQGT-TGS-------DFVSKAID 401 (510)
Q Consensus 331 ~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~~~Y~v-~a~~~~~~~~~~~~i~~~-~~p-------~~~~~~~~ 401 (510)
++.||+.+|+++++ ++|++.||+ .|++|++ +++.......+.|.|++. +++ +++.++.+
T Consensus 403 AL~VLs~lLggg~s-----------S~L~q~LrE-~GLa~svv~~~~~~~~~~~~f~I~l~g~~~~~~~~~~~~~~ev~~ 470 (1119)
T PTZ00432 403 ALLVLNYLLLGTPE-----------SVLYKALID-SGLGKKVVGSGLDDYFKQSIFSIGLKGIKETNEKRKDKVHYTFEK 470 (1119)
T ss_pred HHHHHHHHHcCCCc-----------cHHHHHHHh-cCCCcCCCcCcccCCCCceEEEEEEEcCChHhccchhhhHHHHHH
Confidence 99999999998755 999999996 6999986 344444556788888876 442 33678899
Q ss_pred HHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCC----hHHHHHHHHHHHHhcCCCCC---HHHHHHHHhc---CCH
Q 010447 402 LAARELISVATPGEVDQVQLDRAKQSTKSAILMNLES----RMVVSEDIGRQVLTYGERKP---VEHFLKTVEG---VTA 471 (510)
Q Consensus 402 ~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s----~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~---vT~ 471 (510)
.+.++|.++++ +++++++|+++++++...+...... ....+..+...+++++++.. .+...+.|+. -+.
T Consensus 471 ~I~~~L~~l~~-eGi~~eele~a~~qlef~~rE~~~~~~p~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~lr~~~~~~~ 549 (1119)
T PTZ00432 471 VVLNALTKVVT-EGFNKSAVEASLNNIEFVMKELNLGTYPKGLMLIFLMQSRLQYGKDPFEILRFEKLLNELKLRIDNES 549 (1119)
T ss_pred HHHHHHHHHHH-hCCCHHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHHHhccc
Confidence 99999999998 6799999999999998877654321 23455666666664454443 2222333332 123
Q ss_pred HHHHHHHHHHhcCC
Q 010447 472 KDIASVAQKLLSSP 485 (510)
Q Consensus 472 ~di~~~a~~~l~~~ 485 (510)
.-+++++++||-++
T Consensus 550 ~y~e~Li~k~ll~N 563 (1119)
T PTZ00432 550 KYLEKLIEKHLLNN 563 (1119)
T ss_pred HHHHHHHHHHccCC
Confidence 46888999999733
No 9
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=2.7e-28 Score=254.57 Aligned_cols=401 Identities=18% Similarity=0.202 Sum_probs=310.4
Q ss_pred CCCCceEEEEcCCCcEEEEecCC-CCeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCCh-HHHHHHHHHcCCee
Q 010447 74 VEPGKTKISTLPNGVKIASETSV-SPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH-LRIVREVEAIGGNV 151 (510)
Q Consensus 74 ~~~~~~~~~~L~NGl~v~~~~~~-~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~-~~l~~~l~~~g~~~ 151 (510)
.+....+.++|+||+++.+..+| .+++...+.|+.|+..+|.+..|+||+||||+|.|+++|+. ..+..+++.+||+.
T Consensus 19 ~d~r~y~~I~LpNGl~~LlisDP~a~ks~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskhgGs~ 98 (937)
T COG1025 19 LDDRKYRAIKLPNGLRALLVSDPQADKSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHGGSH 98 (937)
T ss_pred ccCcceeEEECCCCceEEEecCCCCCccceeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHcCCcc
Confidence 34568999999999999976666 46999999999999999999999999999999999999987 57899999999999
Q ss_pred eEeecceeEEEEEeccCCChHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHhhcCC-CCCCC
Q 010447 152 QASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANP 230 (510)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~l~~~~~~~-~~~~~ 230 (510)
||+|..+.|.|.+++.++.++.+|+.+++.+.+|.|+++..++++..|.+|......+-..+++......+-++ |+.+.
T Consensus 99 NA~T~~~~T~fyFeV~~~al~~ALDrFa~ff~~PLf~~e~~dRE~~AV~sE~~~~~~~D~~R~~~~~~~~~np~HP~srF 178 (937)
T COG1025 99 NASTAGERTAFYFEVENDALEGALDRFADFFIEPLFNKEALDRERNAVNSEFTMNLTSDGWRMYQVQALTANPGHPLSKF 178 (937)
T ss_pred ccccCCCceeEEEEecHHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHhcCcCchHHHHHHHHHhhcCCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999977777777777666666677 99988
Q ss_pred CCCChHHhcc----CCHHHHHHHHHhhcCCCCeEEEEcC-CCHHHHHHHHHhhcCCCCCCCCCCCCC--Ccc----CCCc
Q 010447 231 LLAPESAINR----LNSTLLEEFVAENYTGPRMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPK--SVY----TGGD 299 (510)
Q Consensus 231 ~~~~~~~l~~----l~~~~l~~f~~~~~~~~~~~l~i~G-v~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~----~~~~ 299 (510)
..|..+.|.. ...++|.+||+++|.+++|+++|.| -+.+++.+++.++|+.+|......++. +++ .+..
T Consensus 179 s~GN~~TL~~~p~~~v~~el~ef~~~~YSa~~M~lviyg~q~ldeL~~~a~~~F~~Ipn~~~~~p~~p~p~~~d~~t~~i 258 (937)
T COG1025 179 STGNLETLSDKPGLVVQQELKEFHEKHYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIPPIPVPVVTDEQTGKI 258 (937)
T ss_pred CCCChhhhccCCCchHHHHHHHHHHHhcChhheEEEEecCCCHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCChHHhCce
Confidence 8999999988 4578999999999999999999999 999999999999999999776543322 222 2334
Q ss_pred eEEecCCCCCceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEEeecCC
Q 010447 300 YRCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIY 379 (510)
Q Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~~~Y~v~a~~~~~ 379 (510)
.++.+.. +...+.+.|+++... ..-..-....+.+++|..+. | + |- ....+.||+-++.++....
T Consensus 259 i~i~p~~--~~~~L~i~f~i~~~~-~~~~~~~~~~~s~Lig~es~------g----s-L~-~~Lk~~Glit~l~a~~~~~ 323 (937)
T COG1025 259 IHIVPAK--PRPRLRIYFPIDDNS-AKFRSKPDEYLSHLIGNESP------G----S-LL-AWLKKQGLITELSAGLDPI 323 (937)
T ss_pred EEeccCC--CCceEEEEEEcCCcc-cccccCCHHHHHHHhccCCC------c----h-HH-HHHHhccchhhhccccccc
Confidence 4555656 678889999998732 22224466788889987643 2 3 32 3445679999999988766
Q ss_pred C-CcceEEEEEEe-C--cchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHhcC
Q 010447 380 N-HSGMFGIQGTT-G--SDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLE-SRMVVSEDIGRQVLTYG 454 (510)
Q Consensus 380 ~-~~~~~~i~~~~-~--p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~-s~~~~~~~~~~~~~~~~ 454 (510)
. +.|.|.|...- + -++.++++..+.+.++-+.. .++....|+...+-.-..+..... .+.+....+... ..
T Consensus 324 ~~n~~~f~is~~LT~~Gl~~~~~VI~~~F~yl~~l~~-~~~~~~~f~Elq~v~~l~f~y~~~t~~~~~~~~l~~~---m~ 399 (937)
T COG1025 324 SGNYGVFAISYELTDKGLAHYDRVIALTFQYLNLLRE-KGIPKYTFDELQNVLDLDFRYPSKTRPMDYVSWLADN---ME 399 (937)
T ss_pred cCCcceEEEEeehhhcchhhHHHHHHHHHHHHHHHHh-ccchhhHHHHHHHHHHhhhcccccCChHHHHHHHHHh---cc
Confidence 5 77778777553 2 45678888999998888887 557777777665554433333322 233333333322 22
Q ss_pred CCCCHHHH---HHHHhcCCHHHHHHHHHHHhcCCceEEEEcCC
Q 010447 455 ERKPVEHF---LKTVEGVTAKDIASVAQKLLSSPLTMASYGDV 494 (510)
Q Consensus 455 ~~~~~~~~---~~~i~~vT~~di~~~a~~~l~~~~~~~v~G~~ 494 (510)
.. +++.+ .-.+..-.+++++.+..-+.-++.++...++.
T Consensus 400 ~~-p~~~~~~~~~~~~~yd~~~~~~~l~~~~pen~R~~lis~~ 441 (937)
T COG1025 400 RE-PVEHTLYASLVLPRYDPKAIQERLALMTPENARLWLISKL 441 (937)
T ss_pred cC-ChhhhhchhhcccccCHHHHHHHHHhhCccceEEEEecCC
Confidence 22 43333 34567777889999887555467776666644
No 10
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.9e-27 Score=252.61 Aligned_cols=398 Identities=16% Similarity=0.165 Sum_probs=305.6
Q ss_pred CceEEEEcCCCcEEEEecCCC-CeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCCh-HHHHHHHHHcCCeeeEe
Q 010447 77 GKTKISTLPNGVKIASETSVS-PVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH-LRIVREVEAIGGNVQAS 154 (510)
Q Consensus 77 ~~~~~~~L~NGl~v~~~~~~~-~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~-~~l~~~l~~~g~~~~~~ 154 (510)
...+..+|+||+++.+..++. ++.++.+-|..||..||.+..|+|||||||+|.||.+|+. +++..++..+||+.||+
T Consensus 26 r~yr~~~L~Ngl~alLisDp~tD~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~gGssNA~ 105 (974)
T KOG0959|consen 26 REYRGIELTNGLRALLISDPKTDKSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNGGSSNAY 105 (974)
T ss_pred cceeEEEecCCceEEEecCCCCCccceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcCCccccc
Confidence 488999999999999766564 5899999999999999999999999999999999999986 67888899999999999
Q ss_pred ecceeEEEEEeccCCChHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHhhcCC-CCCCCCCC
Q 010447 155 ASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLA 233 (510)
Q Consensus 155 ~~~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~l~~~~~~~-~~~~~~~~ 233 (510)
|+.++|.|.+.+..+.++.+|+.+++.+..|.|++++.++++..+..|..+..++-..+.........-++ +++....|
T Consensus 106 T~~e~T~y~F~V~~~~l~~ALDrFaqFf~~Plf~~~a~eREv~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp~~kF~tG 185 (974)
T KOG0959|consen 106 TDSEHTNYYFDVQHDHLEGALDRFAQFFSDPLFNKSATEREVGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHPYSKFSTG 185 (974)
T ss_pred cccccceEEEecchHHHHHHHHHHHHHhhCcccChHHHHHHHHHHHHHHHhccCcchhHHHHHHHHhcCCCCcchhcccc
Confidence 99999999999999999999999999999999999999999999999999988777777777777777777 99998899
Q ss_pred ChHHhccCC-----HHHHHHHHHhhcCCCCeEEEEcC-CCHHHHHHHHHhhcCCCCCCCCCCC--CCCcc----CCCceE
Q 010447 234 PESAINRLN-----STLLEEFVAENYTGPRMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREE--PKSVY----TGGDYR 301 (510)
Q Consensus 234 ~~~~l~~l~-----~~~l~~f~~~~~~~~~~~l~i~G-v~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~----~~~~~~ 301 (510)
..+.|.... .+.|..||++||.+++|+++|+| .+.+.+..++...|+.+++...+.+ +.+++ .++.+.
T Consensus 186 N~~tL~~~p~~~~~r~~L~kF~k~~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~p~f~~~p~~~e~~~~~~~ 265 (974)
T KOG0959|consen 186 NKKTLLEGPREIDLRDELLKFYKNWYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPRPVFPEPPFLPEELKKLVR 265 (974)
T ss_pred chhhhhhccccchHHHHHHHHHHhhcccccceEEEEcCCChhHHHHHHHHHcccccccCCCCCcccCCCCChHHhCcEEE
Confidence 999999998 89999999999999999999999 9999999999999999987766543 12222 234445
Q ss_pred EecCCCCCceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEEeecCC-C
Q 010447 302 CQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIY-N 380 (510)
Q Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~~~Y~v~a~~~~~-~ 380 (510)
+.+-. +...+.+.|+.|+. ...-+.-....+.+++|..|. +-|...|+.. ||+-++.++.... .
T Consensus 266 v~pik--~~~~l~is~~~p~~-~~~y~~kP~~y~~hLigheg~-----------GSL~~~Lk~~-gw~~sl~a~~~~~as 330 (974)
T KOG0959|consen 266 VVPIK--DGRSLMISWPVPPL-NHHYKSKPLRYLSHLIGHEGP-----------GSLLSYLKRL-GWATSLEAGIPEFAS 330 (974)
T ss_pred EEecc--ccceEEEEEecCCc-ccccccCcHHHHHHHhccCCc-----------chHHHHHHHh-hchheeecCCCcccc
Confidence 55555 56778889999974 244455667888889987643 4455677654 8999998887733 4
Q ss_pred CcceEEEEEEeC---cchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH---hcCChHHHHHHHHHHHHhcC
Q 010447 381 HSGMFGIQGTTG---SDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILM---NLESRMVVSEDIGRQVLTYG 454 (510)
Q Consensus 381 ~~~~~~i~~~~~---p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~---~~~s~~~~~~~~~~~~~~~~ 454 (510)
+.+.|.+.+.-. -+++++++..+.+-+.-+.+ -+..+.-++... .+..... ..+.+...+..+...+. +-
T Consensus 331 ~~~~f~v~idLtd~G~e~~~~ii~~~f~yi~~l~~-~~~~~~i~~E~~--~~~~~~Frf~~k~~p~~~~~~~~~nlq-~~ 406 (974)
T KOG0959|consen 331 GYSFFNVSIDLTDEGLEHVDEIIGLVFNYIKLLQS-AGPEKWIFKELQ--LISEVKFRFQDKEPPMEYASEIASNLQ-YY 406 (974)
T ss_pred ccceEEEEEEeccccchhHHHHHHHHHHHHHHHHh-cCchhHHHHHHH--HhhhhheeecccCCcHHHHHHHHhhcc-cC
Confidence 566777766643 35678888888888887666 323322233222 1222221 22355555556655433 22
Q ss_pred CCCCHHHHHHHHhcCCHHHHHHHHHHHhcCCceEEEEcC
Q 010447 455 ERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGD 493 (510)
Q Consensus 455 ~~~~~~~~~~~i~~vT~~di~~~a~~~l~~~~~~~v~G~ 493 (510)
....+......+....++-|+.+...+-..+..+.+++.
T Consensus 407 P~~~il~~~~ll~~~~p~~i~~~~~~L~p~n~~v~~~s~ 445 (974)
T KOG0959|consen 407 PVEDVLTGSYLLTEFDPDLIQEVLSSLVPSNMRVILVSR 445 (974)
T ss_pred ChHHhhcchhhhhhcChHHHHHHHHhcCcccceeeeeee
Confidence 222233345567888888888888655556666666653
No 11
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=6.9e-24 Score=221.81 Aligned_cols=415 Identities=12% Similarity=0.114 Sum_probs=321.5
Q ss_pred CCCCCCCCCCCCCCCCCCC---CCCCCceEEEEcCCCcEEEEecCC---C-CeEEEEEEEcccccCCCCCCCcHHHHHHH
Q 010447 54 SPSLDFPLPGVSLPPSLPD---YVEPGKTKISTLPNGVKIASETSV---S-PVASISLYVGCGSIYESPISFGTTHLLER 126 (510)
Q Consensus 54 ~~~l~~pl~~~~~p~~~~~---~~~~~~~~~~~L~NGl~v~~~~~~---~-~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~ 126 (510)
.+.+.+|.||.+||.+++. ......+....-..|.++|+.+.+ . |+..+.+.|+...+..++....+..|+..
T Consensus 474 ~~~l~lP~~N~fIp~~~~~~~~~~~~~~p~ll~~~~~~~~wy~~~d~F~~~PK~~v~~~irsp~~~~s~r~~Vl~~l~~~ 553 (937)
T COG1025 474 SIELSLPEPNPFIPDDVSLIKSEKKFTFPQLLSEDPNLRLWYLKEDYFAVEPKASVSLAIRSPHASRSPRNQVLTELYAY 553 (937)
T ss_pred cccccCCCCCCCCCccccccccccCCCCchhhhcCCCceEEEecCCccccCCcceeEEEEeCcccccCHHHHHHHHHHHH
Confidence 3557899999999999654 112233555555678888875443 4 89999999999999988888888888888
Q ss_pred hhccCCCCCChHHHHHHHHHcCCeeeEeecceeEEEEEeccCCChHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHH-
Q 010447 127 MAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISE- 205 (510)
Q Consensus 127 l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~- 205 (510)
+++. ...++.+.+...|.+++...+.++..++++|+++.++++++.+.+.+..-.++++.|+..|..+.+++++
T Consensus 554 la~d-----al~~~~y~A~~aG~sfs~~~~~~Gl~ltisGft~~lp~L~~~~l~~l~~~~~~~~~f~~~K~~~~~~~~~a 628 (937)
T COG1025 554 LAND-----ALDKLSYQASLAGLSFSLAANSNGLDLTISGFTQRLPQLLRAFLDGLFSLPVDEDRFEQAKSQLSEELKNA 628 (937)
T ss_pred HHHH-----HHHhhhhHHHhcceEEEeecCCCceEEEeeccccchHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh
Confidence 8865 3344555677889999999999999999999999999999999999999999999999999999999998
Q ss_pred hhCChHHHHHHHHHHhhcCCCCCCCCCCChHHhccCCHHHHHHHHHhhcCCCCeEEEEcC-CCHHHHHHHHHhhcCCCCC
Q 010447 206 VSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLVSVAEPLLSDLPS 284 (510)
Q Consensus 206 ~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-v~~~~~~~~~~~~~~~l~~ 284 (510)
...+|..++.+.+...+-. ..++.....+.|++++.+++.+|...++++.+..++++| ++.+++.++++.....++.
T Consensus 629 ~~~~p~~~~~~~l~~l~~~--~~~s~~e~~~~l~~v~~~e~~~f~~~l~~~~~lE~lv~Gn~~~~da~~l~~~~~~~l~~ 706 (937)
T COG1025 629 LTGKPYRQALDGLTGLLQV--PYWSREERRNALESVSVEEFAAFRDTLLNGVHLEMLVLGNLTEADATNLAETLQKKLPA 706 (937)
T ss_pred hhcCCHHHHHHHhhhhhCC--CCcCHHHHHHHhhhccHHHHHHHHHHhhhccceeeeeeccchHHHHHHHHHHHHhhhcc
Confidence 5689999998888776653 233333456889999999999999999999999999999 9999999998876665654
Q ss_pred CCCCCC-CC--CccCCCceEEe-cCCCCCceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHH
Q 010447 285 IHPREE-PK--SVYTGGDYRCQ-ADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYR 360 (510)
Q Consensus 285 ~~~~~~-~~--~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~ 360 (510)
...... .+ ....++..... ..........++.+...- .+.++.+...++.+++. ..+|.
T Consensus 707 ~~s~~~~~~~~~~~~~~~~~~e~~~~~~~~an~~i~~~~~~--~~~~~~a~s~Ll~~l~~---------------~~ff~ 769 (937)
T COG1025 707 IGSTWYRNPSVYLLKGGTRIFETVGGESDSANAAILYPQQY--DEIKSSALSSLLGQLIH---------------PWFFD 769 (937)
T ss_pred cCCcccCCCceeccCCCeeEeeeccCCcccccceeEecccc--chHHHHHHHHHHHHHHh---------------HHhHH
Confidence 443211 11 12223333222 221112333334343332 23455555567777754 99999
Q ss_pred HHHhhcCCeEEEEEeecCCCCcceEEEEEEeC---cchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcC
Q 010447 361 RVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTG---SDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLE 437 (510)
Q Consensus 361 ~lRe~~~~~Y~v~a~~~~~~~~~~~~i~~~~~---p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~ 437 (510)
+||+|++++|.|+++.....+...+.|+++++ |+...+.++.|.+.+..... ++++++|+..|..+++++.....
T Consensus 770 ~LRTkeQLGY~Vfs~~~~v~~~~gi~f~vqS~~~~p~~L~~r~~~F~~~~~~~l~--~ms~e~Fe~~k~alin~il~~~~ 847 (937)
T COG1025 770 QLRTKEQLGYAVFSGPREVGRTPGIGFLVQSNSKSPSYLLERINAFLETAEPELR--EMSEEDFEQIKKALINQILQPPQ 847 (937)
T ss_pred HhhhhhhcceEEEecceeecCccceEEEEeCCCCChHHHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHccCC
Confidence 99999999999999999888877788888875 66888899999999988887 49999999999999999999999
Q ss_pred ChHHHHHHHHHHHHhcCCCCC-HHHHHHHHhcCCHHHHHHHHHHHhc-C---CceEEEEcCC
Q 010447 438 SRMVVSEDIGRQVLTYGERKP-VEHFLKTVEGVTAKDIASVAQKLLS-S---PLTMASYGDV 494 (510)
Q Consensus 438 s~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~vT~~di~~~a~~~l~-~---~~~~~v~G~~ 494 (510)
+....+.++|..+..+...++ .+...+.++.+|.+++.++....+. . ...+.+.|+.
T Consensus 848 nl~e~a~r~~~~~~~g~~~Fd~~ek~i~~vk~LT~~~l~~f~~~~l~~~~g~~l~~~i~g~~ 909 (937)
T COG1025 848 NLAEEASRLWKAFGRGNLDFDHREKKIEAVKTLTKQKLLDFFENALSYEQGSKLLSHIRGQN 909 (937)
T ss_pred CHHHHHHHHHHHhccCCCCcCcHHHHHHHHHhcCHHHHHHHHHHhhcccccceeeeeeeccc
Confidence 999999999966553333333 6888999999999999999998888 2 3456666743
No 12
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.93 E-value=6.4e-24 Score=222.88 Aligned_cols=401 Identities=12% Similarity=0.130 Sum_probs=300.4
Q ss_pred ceEEEEcCCCcEEEEecCCCCeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCChHHHHHHHHHc--CCeeeEee
Q 010447 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAI--GGNVQASA 155 (510)
Q Consensus 78 ~~~~~~L~NGl~v~~~~~~~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~~~l~~~l~~~--g~~~~~~~ 155 (510)
.+....-+.|++++...++.+...+.+.|+.. +....|++|+|||+.++|+.+|+..+.--.+-.. +--+||.|
T Consensus 21 ~~~~~H~~TGa~l~hi~~~d~~~vFsi~F~T~----p~dstGVaHiLEHtvlcGS~kYPvkdPF~~ml~rSLntF~NA~T 96 (978)
T COG1026 21 GYILEHEKTGAELAHIKNEDPNNVFSIAFKTE----PHDSTGVAHILEHTVLCGSKKYPVKDPFFKMLKRSLNTFLNAFT 96 (978)
T ss_pred eEEEeeccCCceEEEecCCCcCceEEEEeecC----CCCCCCcchHHHHHhhhCCCCCCCCChHHHHHHHhHHHHHhhcc
Confidence 44444556999999876666666667777665 4456799999999999999999988765554432 33489999
Q ss_pred cceeEEEEEeccC-CChHHHHHHHHHhhhCCCCCHHHHHHH--------------HHHHHHHHHHhhCChHHHHHHHHHH
Q 010447 156 SREQMGYSFDALK-TYVPEMVELLIDCVRNPVFLDWEVNEQ--------------LTKVKSEISEVSNNPQSLLLEAIHS 220 (510)
Q Consensus 156 ~~~~~~~~~~~~~-~~l~~~l~ll~~~~~~p~f~~~~~~~~--------------k~~~~~e~~~~~~~p~~~~~~~l~~ 220 (510)
..|.|.|.+++.. +++-.++.+..|.+.+|.+.++.|.++ +.+|.+|++....++..++++.+.+
T Consensus 97 ~~D~T~YP~sS~~~~Df~NLl~VYlDavf~PlL~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~ss~~~~~~~~~~~ 176 (978)
T COG1026 97 FPDKTVYPASSANEKDFYNLLSVYLDAVFHPLLTKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYSSGESVLSRAMQQ 176 (978)
T ss_pred CCCcceeeccccCcchHHHHHHHHHHhhhCcccchHHHhhhhhccccCCCccceeeeEEeehhcccccCchhHHHHHHHH
Confidence 9999999987765 689999999999999999999999876 4567788999999999999999999
Q ss_pred hhcCC-CCCCCCCCChHHhccCCHHHHHHHHHhhcCCCCeEEEEcC-CCHHHHHHHHHhh-cCCCCCCCCCCC-C-CCcc
Q 010447 221 AGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLVSVAEPL-LSDLPSIHPREE-P-KSVY 295 (510)
Q Consensus 221 ~~~~~-~~~~~~~~~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-v~~~~~~~~~~~~-~~~l~~~~~~~~-~-~~~~ 295 (510)
.+|++ .|+....|.+..|..++.+++++||+++|+|+|..++++| ++.++.++.+++. +...+......+ + ...+
T Consensus 177 slfp~~ty~~~SGG~P~~I~~LtyE~~r~FHkk~Y~pSN~~i~~yGni~~~~~L~~iee~~l~~~~k~~~~~~i~~~~~~ 256 (978)
T COG1026 177 SLFPGTTYGVNSGGDPKNIPDLTYEEFRAFHKKHYHPSNCKIFVYGNIPTERLLDFIEEKVLRPFGKRELDVPIPDQKAF 256 (978)
T ss_pred hhCCCccccccCCCCcccccccCHHHHHHHHHHhCCccceEEEEECCCCHHHHHHHHHHhhhccccccccCCCCCccccc
Confidence 99988 8998889999999999999999999999999999999999 9999999999987 555544332111 1 1111
Q ss_pred C---CC--ceEEe-cCCCCCceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcCCe
Q 010447 296 T---GG--DYRCQ-ADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQV 369 (510)
Q Consensus 296 ~---~~--~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~~~ 369 (510)
. .. .+.+. ...+..+..+.++|.++. ..+..+..++.||..+|-++.+ ++|.+.|.|. |++
T Consensus 257 ~~~~~~~~~ypi~~~~~de~q~~~~lsWl~~~-~~d~~~~lal~vL~~iLl~~~a-----------sPl~~~lies-glg 323 (978)
T COG1026 257 KKPRRKVLEYPISFDEEDEDQGLLSLSWLGGS-ASDAEDSLALEVLEEILLDSAA-----------SPLTQALIES-GLG 323 (978)
T ss_pred CcccccceeeccCCCCCCCceeEEEEEEecCC-cccHHHHHHHHHHHHHHccCcc-----------cHHHHHHHHc-CCC
Confidence 1 11 11122 223336888999999887 3466788999999999999877 9999999886 444
Q ss_pred -EEEEEeecCCCCcceEEEEEE-eCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCChHH--HHHH
Q 010447 370 -QSFSAFSNIYNHSGMFGIQGT-TGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMV--VSED 445 (510)
Q Consensus 370 -Y~v~a~~~~~~~~~~~~i~~~-~~p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~~~--~~~~ 445 (510)
+.++..+...--...|.+.++ |+.++..+.-+.+.+.|+++.. .+++.+.++.++.++.-++......+.. .+.+
T Consensus 324 ~~~~~g~~~~~~~~~~f~v~~~gv~~ek~~~~k~lV~~~L~~l~~-~gi~~~~ie~~~~q~E~s~ke~~s~pfgl~l~~~ 402 (978)
T COG1026 324 FADVSGSYDSDLKETIFSVGLKGVSEEKIAKLKNLVLSTLKELVK-NGIDKKLIEAILHQLEFSLKEVKSYPFGLGLMFR 402 (978)
T ss_pred cccccceeccccceeEEEEEecCCCHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhhhhhcCCCccHHHHHH
Confidence 333332333334466766666 5677888888899999999998 5699999999999998888776444433 3445
Q ss_pred HHHHHHhcCCCCCH---HHHHHHHhc-CCHHH-HHHHHHHHhc-CC-ceEEEEcCCCC
Q 010447 446 IGRQVLTYGERKPV---EHFLKTVEG-VTAKD-IASVAQKLLS-SP-LTMASYGDVIN 496 (510)
Q Consensus 446 ~~~~~~~~~~~~~~---~~~~~~i~~-vT~~d-i~~~a~~~l~-~~-~~~~v~G~~~~ 496 (510)
....++.++.+... ..+.+.|++ +...+ ++++.++||- ++ .+++++-|...
T Consensus 403 ~~~gw~~G~dp~~~Lr~~~~~~~Lr~~le~~~~fe~LI~ky~l~N~h~~~v~~~Ps~~ 460 (978)
T COG1026 403 SLYGWLNGGDPEDSLRFLDYLQNLREKLEKGPYFEKLIRKYFLDNPHYVTVIVLPSPE 460 (978)
T ss_pred hccccccCCChhhhhhhHHHHHHHHHhhhcChHHHHHHHHHhhcCCccEEEEEecChH
Confidence 55555656666542 334444444 33333 9999999999 55 55666655443
No 13
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=2.8e-22 Score=213.52 Aligned_cols=404 Identities=13% Similarity=0.118 Sum_probs=326.5
Q ss_pred CCCCCCCCCCCCCCCCCCCC----CCCCCceEEEEcCCCcEEEEecCC---CCeEEEEEEEcccccCCCCCCCcHHHHHH
Q 010447 53 SSPSLDFPLPGVSLPPSLPD----YVEPGKTKISTLPNGVKIASETSV---SPVASISLYVGCGSIYESPISFGTTHLLE 125 (510)
Q Consensus 53 ~~~~l~~pl~~~~~p~~~~~----~~~~~~~~~~~L~NGl~v~~~~~~---~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~ 125 (510)
..+.+++|.||.++|.+... ..+...+..+.-....++|++.++ -|++.+.+.+.+.-+...+...+++.++.
T Consensus 480 ~~~~l~lP~~nefI~t~f~~~~~~~~~~~~P~Li~~~~~~~lw~k~dd~f~~Pka~~~~~~~~p~~~~~~~~~~l~~l~~ 559 (974)
T KOG0959|consen 480 LNPELHLPTPNEFIPTDFSILPAPIPKLEYPVLISDTPFSELWYKQDDKFNVPKAYTKFDFICPGATQSPLNSVLSTLYV 559 (974)
T ss_pred ccccccCCCCCcccccccccccccCccccCCeeeecCCcceeEEecccccccchhheeeeecCcccccCHHHHHHHHHHH
Confidence 34779999999999986321 122334566666778899987655 47999999999999999999999999999
Q ss_pred HhhccCCCCCChHHHHHHHHHcCCeeeEeecceeEEEEEeccCCChHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHH
Q 010447 126 RMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISE 205 (510)
Q Consensus 126 ~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~ 205 (510)
.++.. ...+..+.+...|..+..+.+..+..+++.+.+++++.+++.+.+++.+...+++.|+..++.+++++++
T Consensus 560 ~~l~d-----~l~E~~Y~A~~aGl~~~~~~s~~G~~~~v~Gfnekl~~ll~~~~~~~~~f~~~~~rf~iike~~~~~~~n 634 (974)
T KOG0959|consen 560 RLLKD-----QLNEYLYPALLAGLTYSLSSSSKGVELRVSGFNEKLPLLLEKVVQMMANFELDEDRFEIIKELLKRELRN 634 (974)
T ss_pred HHHHH-----HHhHHHHHHHhccceEEeeecCCceEEEEeccCcccHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhh
Confidence 88855 4456677788899999999999999999999999999999999999999999999999999999999999
Q ss_pred -hhCChHHHHHHHHHHhhcCCCCCCCCCCChHHhccCCHHHHHHHHHhhcCCCCeEEEEcC-CCHHHHHHHHHhhcCCCC
Q 010447 206 -VSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLVSVAEPLLSDLP 283 (510)
Q Consensus 206 -~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-v~~~~~~~~~~~~~~~l~ 283 (510)
...+|..++.+.+.-.+-. ..|+.....+.++.++.+++..|...++++..+.++|+| ++.++++.+++.....+
T Consensus 635 ~~~~~p~~~a~~~~~lll~~--~~W~~~e~~~al~~~~le~~~~F~~~~~~~~~~e~~i~GN~te~~A~~l~~~v~d~l- 711 (974)
T KOG0959|consen 635 HAFDNPYQLANDYLLLLLEE--SIWSKEELLEALDDVTLEDLESFISEFLQPFHLELLIHGNLTEKEALQLLKSVLDIL- 711 (974)
T ss_pred hhhccHHHHHHHHHHHHhhc--cccchHHHHHHhhcccHHHHHHHHHHHhhhhheEEEEecCcchHHHHHHHHHHHhhh-
Confidence 6788888887777665543 334444456889999999999999999999999999999 99999999877666555
Q ss_pred CCCCCCC-C----------CCccCCC-ceEEe-c-CCCCCceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCC
Q 010447 284 SIHPREE-P----------KSVYTGG-DYRCQ-A-DSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGG 349 (510)
Q Consensus 284 ~~~~~~~-~----------~~~~~~~-~~~~~-~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~ 349 (510)
+...+.. + .-.++.| .+.+. . +...+++.+.+.|++.. .+..+...+.++.+++.
T Consensus 712 ~~~~~~~~p~~~~~~~~~~~~~lp~G~~~~~~~~~n~~~~ns~i~~~~Q~~~--~~~~~~~~~~L~~~li~--------- 780 (974)
T KOG0959|consen 712 KSAAPNSRPLFRSEHLPRREIQLPNGDYYFYRHLLNKTDDNSCIEVYYQIGV--QDTRDNAVLGLLEQLIK--------- 780 (974)
T ss_pred hccCCCCccccccccCcccceeccCCceEEEEcccccCCCCceEEEEEEccc--chhHHHHHHHHHHHHhc---------
Confidence 2221110 1 0122333 33222 2 33346888888898754 67788899999999987
Q ss_pred CCCCcccHHHHHHHhhcCCeEEEEEeecCCCCcceEEEEEEe--CcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHH
Q 010447 350 PGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTT--GSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQS 427 (510)
Q Consensus 350 pg~~~~s~L~~~lRe~~~~~Y~v~a~~~~~~~~~~~~i~~~~--~p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~ 427 (510)
.++|+.||++.+++|.|++..+...+...+.|.+++ .++.++..|+.+.+.+.+... .+++++|+..+..
T Consensus 781 ------ep~Fd~LRTkeqLGYiv~~~~r~~~G~~~~~i~Vqs~~~~~~le~rIe~fl~~~~~~i~--~m~~e~Fe~~~~~ 852 (974)
T KOG0959|consen 781 ------EPAFDQLRTKEQLGYIVSTGVRLNYGTVGLQITVQSEKSVDYLEERIESFLETFLEEIV--EMSDEEFEKHKSG 852 (974)
T ss_pred ------cchHHhhhhHHhhCeEeeeeeeeecCcceeEEEEccCCCchHHHHHHHHHHHHHHHHHH--hcchhhhhhhHHH
Confidence 889999999999999999988877766666666664 477889999999999988887 4999999999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHhcCCCCC-HHHHHHHHhcCCHHHHHHHHHHHhc
Q 010447 428 TKSAILMNLESRMVVSEDIGRQVLTYGERKP-VEHFLKTVEGVTAKDIASVAQKLLS 483 (510)
Q Consensus 428 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~vT~~di~~~a~~~l~ 483 (510)
++........+......++|..+........ .+...+.+..+|.+|+..+...++.
T Consensus 853 lI~~~~ek~~~l~~e~~~~w~ei~~~~y~f~r~~~~v~~l~~i~k~~~i~~f~~~~~ 909 (974)
T KOG0959|consen 853 LIASKLEKPKNLSEESSRYWDEIIIGQYNFDRDEKEVEALKKITKEDVINFFDEYIR 909 (974)
T ss_pred HHHHHhhcCcchhHHHHHHHHHHHhhhhcchhhHHHHHHHHhhhHHHHHHHHHhhcc
Confidence 9999999999999999999999884444443 4677888999999999999999888
No 14
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.88 E-value=1.5e-21 Score=170.65 Aligned_cols=146 Identities=38% Similarity=0.582 Sum_probs=138.4
Q ss_pred EEEEecC-CCCeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCChHHHHHHHHHcCCeeeEeecceeEEEEEecc
Q 010447 89 KIASETS-VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDAL 167 (510)
Q Consensus 89 ~v~~~~~-~~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~ 167 (510)
||++..+ ..+.+.+.+++++|+.+|++...|++|+++||+++|+.+++..++.+.++..|+.++++++.+++.|.++++
T Consensus 1 ~V~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~~~~l~~~l~~~G~~~~~~t~~d~t~~~~~~~ 80 (149)
T PF00675_consen 1 KVVLVEDPGSPVVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYSSDELQEELESLGASFNASTSRDSTSYSASVL 80 (149)
T ss_dssp EEEEEESTTSSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSBHHHHHHHHHHTTCEEEEEEESSEEEEEEEEE
T ss_pred CEEEEEcCCCCEEEEEEEEeeccCCCCCCCCchhhhhhhhcccccchhhhhhhHHHhhhhccccceEecccceEEEEEEe
Confidence 6787666 568999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHhhcCC-CCCCCCCCC
Q 010447 168 KTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAP 234 (510)
Q Consensus 168 ~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~l~~~~~~~-~~~~~~~~~ 234 (510)
+++++.+|+++.+++.+|.|++++|+++|..+..+++....+|...+.+.+++.+|.+ ||+.++.|+
T Consensus 81 ~~~~~~~l~~l~~~~~~P~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p~~~~~~~~ 148 (149)
T PF00675_consen 81 SEDLEKALELLADMLFNPSFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRGHPYGNPLLGP 148 (149)
T ss_dssp GGGHHHHHHHHHHHHHSBGGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSGGGSHSS-T
T ss_pred cccchhHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhccCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999987 999998876
No 15
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.87 E-value=2.7e-19 Score=188.37 Aligned_cols=388 Identities=19% Similarity=0.190 Sum_probs=265.1
Q ss_pred EEEEcCCCcEEEEecCC-CCeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCChHHHHHHHHHcCCeeeEeec--
Q 010447 80 KISTLPNGVKIASETSV-SPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASAS-- 156 (510)
Q Consensus 80 ~~~~L~NGl~v~~~~~~-~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~-- 156 (510)
....-.|..+|++.+.. +..+++.++++.+..... ..+.+.-+..-+...||+++++.++..+++.+.+.++++.+
T Consensus 528 l~~~~~~~~~v~~~~~~tn~i~yl~~~~~~~~l~~~-llpyL~L~~~~l~~lgt~~~~y~e~~~~i~~~TGgis~~~~~~ 606 (978)
T COG1026 528 LETEVSNEAKVLHHDLFTNGITYLRLYFDLDMLPSE-LLPYLPLFAFALTNLGTETYSYKELLNQIERHTGGISVSLSVD 606 (978)
T ss_pred eeeeccCCcceEEeecCCCCeEEEEEEeecCCCChh-hhhhHHHHHHHHHhcCCCCcCHHHHHHHHHHHhCCceeeEeec
Confidence 33455688888876655 569999999999654443 34444444455556799999999999999987655544432
Q ss_pred ---------ceeEEEEEeccCCChHHHHHHHHHhhhCCCC-CHHHHHHHHHHHHHHHHHhh-CChHHHHHHHHHHhhcCC
Q 010447 157 ---------REQMGYSFDALKTYVPEMVELLIDCVRNPVF-LDWEVNEQLTKVKSEISEVS-NNPQSLLLEAIHSAGYSG 225 (510)
Q Consensus 157 ---------~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f-~~~~~~~~k~~~~~e~~~~~-~~p~~~~~~~l~~~~~~~ 225 (510)
+..+++++.++.++.+++++++.+++.++.| |.+.+....+..++.+.+.. +.+..++.....+.++..
T Consensus 607 ~~~~~~~~~~~~~~i~~K~l~~k~~~~~~~i~~~l~~~~F~D~~Rlkell~q~~~~l~~~vr~sG~~~A~~~~~s~~~~~ 686 (978)
T COG1026 607 TDPGDDGEYRPSFSISGKALRSKVEKLFELIREILANTDFHDRERLKELLEQYLSDLTSSVRNSGHSIASSLANSRLSSA 686 (978)
T ss_pred cCCCccccccceEEEEEEehhhhhhHHHHHHHHHHhcCCcCcHHHHHHHHHHHHhhhHHhhhccchHHHHHHhhcccccc
Confidence 3468999999999999999999999999999 77788888888888887744 447766666665555533
Q ss_pred -CCCCCCCCC--hHHhccCC-----------HHHHHHHHHhhcCCCCeEEEEcC-CCHHHHHHHHHhhcCCCCCC-----
Q 010447 226 -ALANPLLAP--ESAINRLN-----------STLLEEFVAENYTGPRMVLAASG-VEHDQLVSVAEPLLSDLPSI----- 285 (510)
Q Consensus 226 -~~~~~~~~~--~~~l~~l~-----------~~~l~~f~~~~~~~~~~~l~i~G-v~~~~~~~~~~~~~~~l~~~----- 285 (510)
.+.....|- .+-|..|. .+.|++.+++++..+|+.+++.| .+ .+.+.+++-|.++...
T Consensus 687 ~~l~e~~~Gl~q~k~i~~l~~~~~~~~~~ei~~kL~~l~~~i~~~~n~~i~i~~~~~--~~~~~~e~~l~~~~~~~~~~~ 764 (978)
T COG1026 687 GALKELLNGLSQVKFLRELSSNFEENFEKEIADKLQALRKKIFQTNNLRIAIIGDID--KILDLLENPLLKFLEHLLPGF 764 (978)
T ss_pred hhHHHHhcChhHHHHHHHHHHhhcccccHHHHHHHHHHHHHHhhcCceEEEEecChh--hhHHHHHHHhhhhhcccCccc
Confidence 332222111 12222221 35788889999999999888888 33 2333333433333211
Q ss_pred CCCCCCC---CccC--CCceEEecCCCCCceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHH
Q 010447 286 HPREEPK---SVYT--GGDYRCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYR 360 (510)
Q Consensus 286 ~~~~~~~---~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~ 360 (510)
..+..+. .+.. .....+. .+ +..+.+++|....--..++|.+++.|+.++|+. ..||.
T Consensus 765 ~~~~~~~~~~~~~~~~~~~~~ii-~~--p~a~~~l~fs~~~~~y~hpd~~~l~vls~~L~~--------------~~lw~ 827 (978)
T COG1026 765 ELPTPPKNPHLDLISSLSEATII-PS--PVAYNALAFSIGGLPYTHPDYAALQVLSEYLGS--------------GYLWN 827 (978)
T ss_pred ccCCCCCCcchhhhccccceEEe-cc--HHHHHHHhhhccCCCCCCccchHHHHHHHHhcc--------------chhHH
Confidence 1111111 1111 1122222 23 334445555432211478999999999999994 79999
Q ss_pred HHHhhcCCeEEEEEeecCCCCcceEEEEEEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCChH
Q 010447 361 RVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRM 440 (510)
Q Consensus 361 ~lRe~~~~~Y~v~a~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~~ 440 (510)
++|++ |++|++++. ...+.|.|.++.-.+|+ ..+..+++.+.++.+++ +.++++|+++++-..++.+.+ .+++.
T Consensus 828 ~IR~~-GGAYGa~as--~~~~~G~f~f~sYRDPn-~~kt~~v~~~~v~~l~s-~~~~~~d~~~~ilg~i~~~d~-p~sp~ 901 (978)
T COG1026 828 KIREK-GGAYGASAS--IDANRGVFSFASYRDPN-ILKTYKVFRKSVKDLAS-GNFDERDLEEAILGIISTLDT-PESPA 901 (978)
T ss_pred HHHhh-ccccccccc--cccCCCeEEEEecCCCc-HHHHHHHHHHHHHHHHc-CCCCHHHHHHHHHHhhccccc-ccCCc
Confidence 99999 559976664 44566778877777875 56789999999999998 789999999999999988765 45665
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHhc---CCceEEEEcC
Q 010447 441 VVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLS---SPLTMASYGD 493 (510)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~~di~~~a~~~l~---~~~~~~v~G~ 493 (510)
.....-....+.+-.+...+.+++.|.++|++||++++++|+. +.-+++++|.
T Consensus 902 ~~~~~s~~~~~sg~~~~~~qa~re~~l~vt~~di~~~~~~yl~~~~~e~~i~~~~~ 957 (978)
T COG1026 902 SEGSKSFYRDLSGLTDEERQAFRERLLDVTKEDIKEVMDKYLLNFSSENSIAVFAG 957 (978)
T ss_pred ceehhhHHHHHhcCCHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccceEEEEec
Confidence 5554333343434444456788999999999999999999998 4556777775
No 16
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.87 E-value=4.9e-21 Score=173.18 Aligned_cols=174 Identities=26% Similarity=0.371 Sum_probs=144.0
Q ss_pred cCCHHHHHHHHHhhcCCCCeEEEEcC-CCHHHHHHHHHhhcCCCCCCC---CCCC-C-C-C--ccCCCceEEe-cCCCCC
Q 010447 240 RLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLVSVAEPLLSDLPSIH---PREE-P-K-S--VYTGGDYRCQ-ADSGDQ 309 (510)
Q Consensus 240 ~l~~~~l~~f~~~~~~~~~~~l~i~G-v~~~~~~~~~~~~~~~l~~~~---~~~~-~-~-~--~~~~~~~~~~-~~~~~~ 309 (510)
+||.++|++||++||+|+||+++++| ++++++.++++++|+.|+... .... . . + ...+...... .+. +
T Consensus 1 ~it~e~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 78 (184)
T PF05193_consen 1 NITLEDLRAFYKKFYRPSNMTLVIVGDIDPDELEKLIEKYFGSLPKSSIPPKPKPRSPPLPPSEPQGKEIVIPSKDE--S 78 (184)
T ss_dssp C--HHHHHHHHHHHSSGGGEEEEEEESSGHHHHHHHHHHHHTTSSHSCHGGSSSCSSSSSSCGGSSEEEEEEEESSS--S
T ss_pred CCCHHHHHHHHHHhcCccceEEEEEcCccHHHHHHHHHhhhhhhccccccccccccccccccccccccccccccccc--c
Confidence 47899999999999999999999999 999999999999999998654 1111 1 1 1 1112222222 343 6
Q ss_pred ceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEEeecCCCCcceEEEEE
Q 010447 310 LTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQG 389 (510)
Q Consensus 310 ~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~~~Y~v~a~~~~~~~~~~~~i~~ 389 (510)
...+.++|..++. .+.++..++.++..+|+++ ++++|+..||++.+++|+++++...+.+.+.|++++
T Consensus 79 ~~~v~~~~~~~~~-~~~~~~~~~~~l~~~l~~~-----------~~s~l~~~lr~~~~l~y~v~~~~~~~~~~~~~~i~~ 146 (184)
T PF05193_consen 79 QSIVSIAFPGPPI-KDSKDYFALNLLSSLLGNG-----------MSSRLFQELREKQGLAYSVSASNSSYRDSGLFSISF 146 (184)
T ss_dssp SEEEEEEEEEEET-GTSTTHHHHHHHHHHHHCS-----------TTSHHHHHHHTTTTSESEEEEEEEEESSEEEEEEEE
T ss_pred ccccccccccccc-cccchhhHHHHHHHHHhcC-----------ccchhHHHHHhccccceEEEeeeeccccceEEEEEE
Confidence 8999999999872 2779999999999999987 559999999999999999999987777889999999
Q ss_pred EeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHH
Q 010447 390 TTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQST 428 (510)
Q Consensus 390 ~~~p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~ 428 (510)
++.+++..++++.+.++++.+++ ++++++||+++|+++
T Consensus 147 ~~~~~~~~~~~~~~~~~l~~l~~-~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 147 QVTPENLDEAIEAILQELKRLRE-GGISEEELERAKNQL 184 (184)
T ss_dssp EEEGGGHHHHHHHHHHHHHHHHH-HCS-HHHHHHHHHHH
T ss_pred EcCcccHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHhcC
Confidence 99999999999999999999999 679999999999875
No 17
>PTZ00432 falcilysin; Provisional
Probab=99.86 E-value=4.2e-19 Score=199.28 Aligned_cols=390 Identities=13% Similarity=0.076 Sum_probs=265.7
Q ss_pred EcCCCcEEEEecCCCC-eEEEEEEEcccccCCCCCCCcHHHHHHHhh-ccCCCCCChHHHHHHHHHcCCeeeEe----ec
Q 010447 83 TLPNGVKIASETSVSP-VASISLYVGCGSIYESPISFGTTHLLERMA-FRSTRNRSHLRIVREVEAIGGNVQAS----AS 156 (510)
Q Consensus 83 ~L~NGl~v~~~~~~~~-~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~-~~gt~~~s~~~l~~~l~~~g~~~~~~----~~ 156 (510)
...+|++|++.+.++. .+++.++++.....+. ...+..|+..++ ..||.++++.++...++...++++++ ++
T Consensus 664 ~~~~~~~~~~~~~~TnGi~y~~~~fdl~~l~~e--~~~yl~L~~~~l~~~gT~~~s~~el~~~i~~~tGg~~~~~~~~~~ 741 (1119)
T PTZ00432 664 SDGGSVTVLVHPIESRGILYLDFAFSLDSLTVD--ELKYLNLFKALLKENGTDKLSSEEFTYKREKNLGGLSASTAFYSE 741 (1119)
T ss_pred ccCCCcceEEEecCCCCeEEEEEEecCCCCCHH--HHhhHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCeEEEEEEecc
Confidence 3468999998777755 9999999999976553 444555665554 45999999999999999986666554 22
Q ss_pred ------------ceeEEEEEeccCCChHHHHHHHHHhhhCCCCCHHH-HHHHHHHHHHHHHHhh-CChHHHHHHHHHHhh
Q 010447 157 ------------REQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWE-VNEQLTKVKSEISEVS-NNPQSLLLEAIHSAG 222 (510)
Q Consensus 157 ------------~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~-~~~~k~~~~~e~~~~~-~~p~~~~~~~l~~~~ 222 (510)
...+.+++.|+.++++++++++.+++.++.|++.+ +....++.+..+.+.. .+....+...+.+..
T Consensus 742 ~~~~~~~~~~~~~~~~~v~~k~l~~~~~~~~~l~~eil~~~~f~d~~rl~~il~~~~~~~~~~~~~~Gh~~A~~~~~s~~ 821 (1119)
T PTZ00432 742 TNNLTYDDPYNGVGYLNVRAKVLKHKVNEMVDIVLEALKDADFSNSKKGVEILKRKINGMKTVFSSKGHKFALKRMKSKF 821 (1119)
T ss_pred ccccccCcccccceEEEEEEEEhhhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcC
Confidence 33689999999999999999999999999998755 7777777777777643 355555554333322
Q ss_pred cCC-CCCCCCCC--ChHHhccCC-----------HHHHHHHHHhhcCCCCeEEEEcC-C-CHHHHHHHHHhhcCCCCCC-
Q 010447 223 YSG-ALANPLLA--PESAINRLN-----------STLLEEFVAENYTGPRMVLAASG-V-EHDQLVSVAEPLLSDLPSI- 285 (510)
Q Consensus 223 ~~~-~~~~~~~~--~~~~l~~l~-----------~~~l~~f~~~~~~~~~~~l~i~G-v-~~~~~~~~~~~~~~~l~~~- 285 (510)
... .+...+.| ...-|+.+. .+.|.++++..|+.+++.+.++| . ..+.+.+.+..++..++..
T Consensus 822 S~~~~~~e~~~G~~~~~fl~~l~~~~~e~~~~~v~~~L~~i~~~i~~~~~l~~~vt~~~~~~~~~~~~~~~~~~~l~~~~ 901 (1119)
T PTZ00432 822 SVSDYADELVNGYSQLLFLKETLVPLAEKDWSKVESKLNEIRNKLLSMKNLTVNVTGDSELLDSLLDDSTTFLKKLSSTF 901 (1119)
T ss_pred CHHHHHHHHhcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCcCCcEEEEEeCHHHHHHHHHHHHHHHHhccccc
Confidence 111 11111111 111122111 34578889999999999999999 5 4566667666677666421
Q ss_pred ---C--CC-CCCCC------ccCC--CceEEecCCCCCceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCC
Q 010447 286 ---H--PR-EEPKS------VYTG--GDYRCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPG 351 (510)
Q Consensus 286 ---~--~~-~~~~~------~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg 351 (510)
. .. ..... .+.. ....+..++ ...+++.+..... .++++..++.|+..+|..
T Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~p~--~V~yv~~~~~~~~--~~~~~~~~l~Vl~~~L~~---------- 967 (1119)
T PTZ00432 902 KENDNKSSDKVWVKEVLDKKLMESVDKNEFIVLPT--RVNFVGMGGKLFD--KSDKVDGSFQVIVHYLKN---------- 967 (1119)
T ss_pred ccccccccccccccccccccccCCcccceEEEccC--ceeEEEEeccccc--CCCccCHHHHHHHHHHcc----------
Confidence 1 00 00000 0111 111222334 4556666644333 356779999999999984
Q ss_pred CCcccHHHHHHHhhcCCeEEEEEeecCCCCcceEEEEEEeCcchHHHHHHHHHHHHHHhhCCC--CCCHHHHHHHHHHHH
Q 010447 352 KGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPG--EVDQVQLDRAKQSTK 429 (510)
Q Consensus 352 ~~~~s~L~~~lRe~~~~~Y~v~a~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~--~~t~~el~~ak~~~~ 429 (510)
+.||.+||++. ++|++++... ..|.|.++.-.+|. ..+.++.+.+..+.+++ + .+|++|+++++..++
T Consensus 968 ----~yLw~~IR~~G-GAYG~~~~~~---~~G~~~f~SYRDPn-~~~Tl~~f~~~~~~l~~-~~~~~~~~~l~~~iig~~ 1037 (1119)
T PTZ00432 968 ----SYLWKTVRMSL-GAYGVFADLL---YTGHVIFMSYADPN-FEKTLEVYKEVASALRE-AAETLTDKDLLRYKIGKI 1037 (1119)
T ss_pred ----ccchHHHcccC-CccccCCccC---CCCeEEEEEecCCC-HHHHHHHHHHHHHHHHh-cCCCCCHHHHHHHHHHHH
Confidence 89999999995 5998875543 24777776666663 55677777777766655 3 399999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHhc--CCceEEEEcCCCCCCC
Q 010447 430 SAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLS--SPLTMASYGDVINVPS 499 (510)
Q Consensus 430 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vT~~di~~~a~~~l~--~~~~~~v~G~~~~~p~ 499 (510)
+.+... .++..........++.+-.....+++++.|-++|++||+++|++++. +.-.++|+|+..++.+
T Consensus 1038 ~~~D~p-~~p~~~g~~~~~~~l~g~t~e~rq~~R~~il~~t~edi~~~a~~~~~~~~~~~~~v~g~~~~~~~ 1108 (1119)
T PTZ00432 1038 SNIDKP-LHVDELSKLALLRIIRNESDEDRQKFRKDILETTKEDFYRLADLMEKSKEWEKVIAVVNSKTSDT 1108 (1119)
T ss_pred hccCCC-CChHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhccCeEEEEECHHHhhh
Confidence 888664 45555554444444534455568899999999999999999999998 5567899998766544
No 18
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=99.85 E-value=6.8e-19 Score=175.91 Aligned_cols=400 Identities=13% Similarity=0.100 Sum_probs=292.5
Q ss_pred ceEEEEcCCCcEEEEecCCCCeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCChHH-HHHHHHH-cCCeeeEee
Q 010447 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLR-IVREVEA-IGGNVQASA 155 (510)
Q Consensus 78 ~~~~~~L~NGl~v~~~~~~~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~~~-l~~~l~~-~g~~~~~~~ 155 (510)
.+....-.-|.++...+...+.-.+++.|+.. ++...|+.|++||-..+|+.+|+..+ +.+.+.+ ...-+||+|
T Consensus 53 av~lkH~~Tgae~lhl~reD~N~vFsI~FrTp----p~dstGiPHILEHtvLCGS~KYPvrdPFfkmLnrSLatFmNAfT 128 (998)
T KOG2019|consen 53 AVLLKHKKTGAEVLHLDREDENNVFSIVFRTP----PKDSTGIPHILEHTVLCGSRKYPVRDPFFKMLNRSLATFMNAFT 128 (998)
T ss_pred heeeeecCCCceeEeeccCCCCceeEEEeecC----CCccCCCchhhhhheeeccCcCcccChHHHHHHHHHHHHHhhcc
Confidence 45555566899999766655444556666655 45567999999999999999988754 3444433 234589999
Q ss_pred cceeEEEEEeccC-CChHHHHHHHHHhhhCCCCCHHHHHHH------------------HHHHHHHHHHhhCChHHHHHH
Q 010447 156 SREQMGYSFDALK-TYVPEMVELLIDCVRNPVFLDWEVNEQ------------------LTKVKSEISEVSNNPQSLLLE 216 (510)
Q Consensus 156 ~~~~~~~~~~~~~-~~l~~~l~ll~~~~~~p~f~~~~~~~~------------------k~~~~~e~~~~~~~p~~~~~~ 216 (510)
..+++.|-+.+.+ +++..+..+..|....|..-+..|.++ |.++.+|++....+|...+..
T Consensus 129 ~pD~T~yPfattN~kDf~NL~dVYLDAtffPklr~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~~~if~~ 208 (998)
T KOG2019|consen 129 APDYTFYPFATTNTKDFYNLRDVYLDATFFPKLRKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDPDYIFGM 208 (998)
T ss_pred CCCcceeecccCChHHHHHHHHHhhhcccchHHHhhhhhhhcceeecCCCCCCcccceeeeeeeecccccccChhHHHHH
Confidence 9999999877664 689999999999999999887777765 677888999988999999999
Q ss_pred HHHHhhcCC-CCCCCCCCChHHhccCCHHHHHHHHHhhcCCCCeEEEEcC-CCHHHHHHHHHhhcCCCCCCCCCCCCC--
Q 010447 217 AIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPK-- 292 (510)
Q Consensus 217 ~l~~~~~~~-~~~~~~~~~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-v~~~~~~~~~~~~~~~l~~~~~~~~~~-- 292 (510)
.+.+.+|++ .|+....|++.+|..+++++|++|++++|+|+|..++.+| +..++.+++++.-|....+.....+..
T Consensus 209 ~~Qq~L~p~~tYgv~SGGDPl~IpdLt~eelk~FHr~~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~~s~kv~~q 288 (998)
T KOG2019|consen 209 LFQQALFPENTYGVNSGGDPLDIPDLTYEELKEFHRQHYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRELSSKVTFQ 288 (998)
T ss_pred HHHHhhCccccccccCCCCcccCccccHHHHHHHHHhccCCCcceeEeecCchHHHHHHHHHHhhcccccccccCccccc
Confidence 999999988 9999889999999999999999999999999999999999 999999999998776654433322211
Q ss_pred CccCCCceEEe---c---CCCCCceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhc
Q 010447 293 SVYTGGDYRCQ---A---DSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF 366 (510)
Q Consensus 293 ~~~~~~~~~~~---~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~ 366 (510)
..+......+. . +.+..++...+.|-.+. ..+..+..++.+|..||-+|.+ |++|+.|.|..
T Consensus 289 k~f~kp~rvve~~p~d~~~~p~Kq~~~s~s~L~~~-p~d~~etfaL~~L~~Ll~~gps-----------Sp~yk~LiESG 356 (998)
T KOG2019|consen 289 KLFDKPRRVVEKGPADPGDLPKKQTKCSNSFLSND-PLDTYETFALKVLSHLLLDGPS-----------SPFYKALIESG 356 (998)
T ss_pred cccccCceeeeecCCCCCCCccceeEEEEEeecCC-chhHHHHHHHHHHHHHhcCCCc-----------cHHHHHHHHcC
Confidence 11211111111 1 11224677777787665 2466788999999999998876 99999999873
Q ss_pred -CCeEEEEEeecCCCCcceEEEEEEe-CcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCChH-HHH
Q 010447 367 -PQVQSFSAFSNIYNHSGMFGIQGTT-GSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRM-VVS 443 (510)
Q Consensus 367 -~~~Y~v~a~~~~~~~~~~~~i~~~~-~p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~~-~~~ 443 (510)
|.-.++++++....-.+.|++..+. ..+++++.-+.+...+++++. .+++.+.+++..+++.-++..+-.... ..+
T Consensus 357 LGtEfsvnsG~~~~t~~~~fsVGLqGvseediekve~lV~~t~~~lae-~gfd~drieAil~qiEislk~qst~fGL~L~ 435 (998)
T KOG2019|consen 357 LGTEFSVNSGYEDTTLQPQFSVGLQGVSEEDIEKVEELVMNTFNKLAE-TGFDNDRIEAILHQIEISLKHQSTGFGLSLM 435 (998)
T ss_pred CCcccccCCCCCcccccceeeeeeccccHHHHHHHHHHHHHHHHHHHH-hccchHHHHHHHHHhhhhhhccccchhHHHH
Confidence 2246666666666566888888875 456778888888899999998 669999999888887766554433322 234
Q ss_pred HHHHHHHHhcCCCCCHH-------HHHHHHhcCCHHHHHHHHHHHhcCCc---eEEEEcCC
Q 010447 444 EDIGRQVLTYGERKPVE-------HFLKTVEGVTAKDIASVAQKLLSSPL---TMASYGDV 494 (510)
Q Consensus 444 ~~~~~~~~~~~~~~~~~-------~~~~~i~~vT~~di~~~a~~~l~~~~---~~~v~G~~ 494 (510)
..+...|.+..++.... .+...+..-...=++...++|+.++. ++-+.++.
T Consensus 436 ~~i~~~W~~d~DPfE~Lk~~~~L~~lk~~l~ek~~~lfq~lIkkYilnn~h~~t~smqpd~ 496 (998)
T KOG2019|consen 436 QSIISKWINDMDPFEPLKFEEQLKKLKQRLAEKSKKLFQPLIKKYILNNPHCFTFSMQPDP 496 (998)
T ss_pred HHHhhhhccCCCccchhhhhhHHHHHHHHHhhhchhHHHHHHHHHHhcCCceEEEEecCCc
Confidence 45555556566665322 23344444456678889999999333 34444444
No 19
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.85 E-value=6.9e-19 Score=175.56 Aligned_cols=385 Identities=15% Similarity=0.145 Sum_probs=277.1
Q ss_pred CCCcEEEEecCCCCeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCChHHHHHHHHHc-CCeeeEeecceeEEEE
Q 010447 85 PNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAI-GGNVQASASREQMGYS 163 (510)
Q Consensus 85 ~NGl~v~~~~~~~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~~~l~~~l~~~-g~~~~~~~~~~~~~~~ 163 (510)
.-|++|++-..+++.+. .+|-...-. ....|+.|-+|||.|.|+++|+...+...+... -++.|+.|+.+++.|+
T Consensus 27 ~Tkl~va~~~~pts~vh--G~f~v~TEa--~~d~G~PHTLEHL~FMGSKkYP~kGvLd~~anr~l~dtNAwTDtD~T~Yt 102 (1022)
T KOG0961|consen 27 NTKLRVAIGEVPTSMVH--GAFSVVTEA--DSDDGLPHTLEHLVFMGSKKYPFKGVLDVIANRCLADTNAWTDTDHTAYT 102 (1022)
T ss_pred ccceEEEEeecCCccee--eeEEeeeee--cCCCCCchhHHHHhhhccccCCcccHHHHhhcchhcccccccccCcceEE
Confidence 35788888777776433 333333222 236799999999999999999998887666554 4679999999999999
Q ss_pred EeccC-CChHHHHHHHHHhhhCCCCCHHHHHHH----------HHHHHHHHHHhhCChHHHHHHHHHHhhcC-C-CCCCC
Q 010447 164 FDALK-TYVPEMVELLIDCVRNPVFLDWEVNEQ----------LTKVKSEISEVSNNPQSLLLEAIHSAGYS-G-ALANP 230 (510)
Q Consensus 164 ~~~~~-~~l~~~l~ll~~~~~~p~f~~~~~~~~----------k~~~~~e~~~~~~~p~~~~~~~l~~~~~~-~-~~~~~ 230 (510)
+++.- +.+-++|....|.+..|.+++++|..+ +..+..|+++.+........+.....+|+ . +|...
T Consensus 103 LStag~dGFlklLPvy~dHiL~P~Ltdeaf~TEVyHI~geg~d~GVVySEMq~~es~~~~im~~~~~~~~yP~~sgY~~e 182 (1022)
T KOG0961|consen 103 LSTAGSDGFLKLLPVYIDHILTPMLTDEAFATEVYHITGEGNDAGVVYSEMQDHESEMESIMDRKTKEVIYPPFSGYAVE 182 (1022)
T ss_pred eecccccchHHHhHHHHHhhcCcccchhhhhhheeeecCCCCccceeehhhhhhhcccchhhhhhhheeecCCCCCceec
Confidence 98775 568899999999999999999999876 46788899988888888888889999995 4 88888
Q ss_pred CCCChHHhccCCHHHHHHHHHhhcCCCCeEEEEcC-CCHHHHHHHHHhhcCCCCCCCCCCCC--CCcc----------CC
Q 010447 231 LLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEP--KSVY----------TG 297 (510)
Q Consensus 231 ~~~~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-v~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~----------~~ 297 (510)
..|....|..+|.+.+++||+++|.++||++.++| +++++++...+..-..++......++ +.+| ..
T Consensus 183 TGG~~knLR~lt~ekIR~yHK~~Y~~sN~cviVcG~v~~d~lL~~m~~~~neile~~s~vP~~~~rPf~~tn~~~~i~e~ 262 (1022)
T KOG0961|consen 183 TGGRLKNLRELTLEKIRDYHKKFYHLSNMCVIVCGMVDHDQLLEIMNNVENEILEHMSTVPDHFPRPFSFTNALSDIKES 262 (1022)
T ss_pred cCCChhhHHHhhHHHHHHHHHHhccccceEEEEecCcCHHHHHHHHHHHHhhhhhccccCCCCCCCCcccccCcccCCcc
Confidence 88899999999999999999999999999999999 99999999887765544432221111 1111 11
Q ss_pred CceEEe-cCCCCCceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHh-hcCCeEEEEEe
Q 010447 298 GDYRCQ-ADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLN-EFPQVQSFSAF 375 (510)
Q Consensus 298 ~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe-~~~~~Y~v~a~ 375 (510)
...++. +..+..+..|.++|.++. ..+.....++.+|..+|....- +++-+++.+ +..++-+++..
T Consensus 263 t~~tVefp~~Des~G~v~~aW~g~s-~sD~~t~~a~~vL~dyls~sav-----------apf~~~fVeieDP~assv~f~ 330 (1022)
T KOG0961|consen 263 TVHTVEFPTDDESRGAVEVAWFGHS-PSDLETHSALHVLFDYLSNSAV-----------APFQKDFVEIEDPLASSVSFH 330 (1022)
T ss_pred ceeeeecCCcccccceEEEEEcCCC-HHHhhhHHHHHHHHHHhccccc-----------cccccceEEecCccccceeee
Confidence 122333 222225788999999886 3466777899999999997643 556666554 34567666555
Q ss_pred ecCCCCcceEEEEEEe-CcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCChHH--HHHHHHHHHHh
Q 010447 376 SNIYNHSGMFGIQGTT-GSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMV--VSEDIGRQVLT 452 (510)
Q Consensus 376 ~~~~~~~~~~~i~~~~-~p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~~~--~~~~~~~~~~~ 452 (510)
....- ...+.+.++. +.+++.+.-..+++.+.+-++ ++-+.+.....+.+-+++.+++.+.. .+..+....+
T Consensus 331 ~~~~v-rc~i~L~f~gVP~EKi~~~~~k~l~~l~et~~---iDm~Rm~~~i~~t~~~yL~nlE~n~~s~fms~ii~d~~- 405 (1022)
T KOG0961|consen 331 IAEGV-RCDIRLNFAGVPVEKIDECAPKFLDKLVETAN---IDMERMGYLIDQTILNYLVNLETNAPSDFMSHIIGDQL- 405 (1022)
T ss_pred eeccc-ceeEEEeecCCcHHHhhhhhHHHHHHHHHhcc---cCHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHhhhhh-
Confidence 43332 2345555554 456777777777776655433 87777777777777788888876532 3344444434
Q ss_pred cCCCC--C------HHHHHHHHhcCCHHHHHHHHHHHhc-CCceEEE
Q 010447 453 YGERK--P------VEHFLKTVEGVTAKDIASVAQKLLS-SPLTMAS 490 (510)
Q Consensus 453 ~~~~~--~------~~~~~~~i~~vT~~di~~~a~~~l~-~~~~~~v 490 (510)
+|... . ..++.+.+.+-..+|.+++.+|||- ++.++++
T Consensus 406 ygnedg~~l~~~lk~l~~~~~L~~w~~kdW~~Llnk~Fven~s~tVi 452 (1022)
T KOG0961|consen 406 YGNEDGELLKKRLKELDFLKKLKSWPAKDWVQLLNKYFVENPSATVI 452 (1022)
T ss_pred ccCcchhHHHHHHHhHHHHHHHhhccHHHHHHHHHHHhccCCCeEEE
Confidence 34332 1 1245678899999999999999999 4444444
No 20
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=1.2e-16 Score=159.91 Aligned_cols=383 Identities=17% Similarity=0.118 Sum_probs=259.8
Q ss_pred EEcCCCcEEEEecCCC-CeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCChHHHHHHHHHcCCeeeEee--c--
Q 010447 82 STLPNGVKIASETSVS-PVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASA--S-- 156 (510)
Q Consensus 82 ~~L~NGl~v~~~~~~~-~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~--~-- 156 (510)
...-||++|...+.+. ..+++++.+..++..+. -.+.+.-+|..++..||+..+..++.+.+..+.+.++++. .
T Consensus 564 v~dingvkv~~~dl~tngi~Y~r~~~~l~~~p~e-L~PylPlfc~sll~lGt~~lsf~el~qqI~rkTGGiS~~p~~~s~ 642 (998)
T KOG2019|consen 564 VGDINGVKVQRCDLFTNGITYTRVVFDLNSLPEE-LLPYLPLFCQSLLNLGTGDLSFVELEQQIGRKTGGISVSPLVSSD 642 (998)
T ss_pred eeeccCceeEEeeccCCceEEEEEeeccccCcHH-hhcchHHHHHHHHhcCCCcccHHHHHHHhhhhcCceeecceeccC
Confidence 4456999999887775 49999999999996664 3567788899999999999999999999999866555543 2
Q ss_pred ------ceeEEEEEeccCCChHHHHHHHHHhhhCCCCCH-HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHhhcC-C-CC
Q 010447 157 ------REQMGYSFDALKTYVPEMVELLIDCVRNPVFLD-WEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYS-G-AL 227 (510)
Q Consensus 157 ------~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~-~~~~~~k~~~~~e~~~~~~~p~~~~~~~l~~~~~~-~-~~ 227 (510)
...+.+...++..+.+.+++++...+.++.|++ +.|+.......+++.+.-.+....+...-..+.+. . ..
T Consensus 643 ~~~d~p~~~i~~~~~~l~rn~~dlfel~n~il~e~~f~n~dkfkvlvk~s~s~~~n~i~dsGH~~A~~rs~a~l~~ag~i 722 (998)
T KOG2019|consen 643 DGMDEPELGIVFSGSMLDRNADDLFELWNKILQETCFTNQDKFKVLVKQSASRMTNGIADSGHGFAAARSAAMLTPAGWI 722 (998)
T ss_pred CCCCccceeEEechhhhcCChhHHHHHHHHHhcccCcccHHHHHHHHHHHHHHhhccCCcccchhHhhhhhcccCcccch
Confidence 124778888889999999999999999999985 46666666666666664433332222222222221 1 11
Q ss_pred CCCCCCChHH---hccC---C-------HHHHHHHHHhhcCCCCeEEEEcC--CCHHHHHHHHHhhcCCCCCCCC-CCC-
Q 010447 228 ANPLLAPESA---INRL---N-------STLLEEFVAENYTGPRMVLAASG--VEHDQLVSVAEPLLSDLPSIHP-REE- 290 (510)
Q Consensus 228 ~~~~~~~~~~---l~~l---~-------~~~l~~f~~~~~~~~~~~l~i~G--v~~~~~~~~~~~~~~~l~~~~~-~~~- 290 (510)
...+ |-.+. +..| . .+.|.++.+-+...++|.+.|.. ..+..+++.+++++..+|...+ ...
T Consensus 723 ~Eql-gGl~ql~fl~~L~~~~d~d~~~i~~kL~eIrk~ll~~ng~~~~itAd~~q~~~vEkav~kFl~~lp~e~p~g~~s 801 (998)
T KOG2019|consen 723 SEQL-GGLSQLEFLHRLEEKVDNDWEPIVSKLTEIRKSLLNTNGMIVNITADPKQLTNVEKAVEKFLDSLPRENPSGSKS 801 (998)
T ss_pred HhHh-cchHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEecCcccchhHHHHHHHHHHhccccCCCCCcc
Confidence 1111 11111 1111 1 24566666667789999999988 8999999999999998884221 111
Q ss_pred -CCCccC--CCceEEe-cCCCCCceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhc
Q 010447 291 -PKSVYT--GGDYRCQ-ADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF 366 (510)
Q Consensus 291 -~~~~~~--~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~ 366 (510)
.....+ ....++. +.- +..++.-+-.+.+ +++++...+.|++.+|.. .+|+.++|++.
T Consensus 802 t~d~r~p~~~~~i~~~~P~f--qvnyvgka~~~vp--yt~~d~asl~vlS~~lt~--------------k~Lh~evRekG 863 (998)
T KOG2019|consen 802 TWDARLPLRSEAIRVVIPTF--QVNYVGKAGLGVP--YTHPDGASLQVLSKLLTN--------------KWLHDEVREKG 863 (998)
T ss_pred CccccCCCCceeEEEecccc--chhhhhhhccccc--CCCCCCcHHHHHHHHHHH--------------HHHHHHHHHhc
Confidence 111111 1122222 222 2334443444444 578999999999999985 89999999995
Q ss_pred CCeEEEEEeecCCCCcceEEEEEEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 010447 367 PQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDI 446 (510)
Q Consensus 367 ~~~Y~v~a~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~~~~~~~~ 446 (510)
| +|+.++.+ ....|.|+++.-.+|+ ..+.++.+...-+-++. ..+++++|++||-......... +.+...- +
T Consensus 864 G-AYGgg~s~--~sh~GvfSf~SYRDpn-~lktL~~f~~tgd~~~~-~~~~~~dldeAkl~~f~~VDap-~~P~~kG--~ 935 (998)
T KOG2019|consen 864 G-AYGGGCSY--SSHSGVFSFYSYRDPN-PLKTLDIFDGTGDFLRG-LDVDQQDLDEAKLGTFGDVDAP-QLPDAKG--L 935 (998)
T ss_pred C-ccCCcccc--ccccceEEEEeccCCc-hhhHHHhhcchhhhhhc-CCccccchhhhhhhhcccccCC-cCCcccc--h
Confidence 5 99666544 4556788887777775 45677777777666666 6799999999999988777542 2333222 3
Q ss_pred HHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHhc-CC--ceEEEEcC
Q 010447 447 GRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLS-SP--LTMASYGD 493 (510)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~i~~vT~~di~~~a~~~l~-~~--~~~~v~G~ 493 (510)
.+. +.+-.++..+..++.|-+++.+|+.++|.+|+. .. ..+++.|+
T Consensus 936 ~~f-l~gvtDemkQarREqll~vSl~d~~~vae~yl~~~~~~~~vav~g~ 984 (998)
T KOG2019|consen 936 LRF-LLGVTDEMKQARREQLLAVSLKDFKAVAEAYLGVGDKGVAVAVAGP 984 (998)
T ss_pred HHH-HhcCCHHHHHHHHHHHHhhhHHHHHHHHHHHhccCCcceEEEeeCc
Confidence 333 324444456667889999999999999999999 33 34555564
No 21
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.38 E-value=6.5e-11 Score=119.33 Aligned_cols=368 Identities=13% Similarity=0.118 Sum_probs=228.9
Q ss_pred CCCCeEEEEEEEcccccCCCCCCCcHHHHHHHhhc------cCCCCCC----hHHHHHHHHHcCCeeeEe-----eccee
Q 010447 95 SVSPVASISLYVGCGSIYESPISFGTTHLLERMAF------RSTRNRS----HLRIVREVEAIGGNVQAS-----ASREQ 159 (510)
Q Consensus 95 ~~~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~------~gt~~~s----~~~l~~~l~~~g~~~~~~-----~~~~~ 159 (510)
-+...+.+..+++.....- ....+..++..+++ .|+-+-+ ..++.+.+....++.+.. +-++-
T Consensus 558 ~ps~Fvel~fl~dss~i~~--sl~pYl~~f~~l~~~~pa~ldgtiptp~~~s~~~v~~~~~s~~id~si~~g~~G~~~~l 635 (1022)
T KOG0961|consen 558 CPSKFVELFFLLDSSNISI--SLRPYLFLFTDLLFESPAMLDGTIPTPVLTSADDVAKHFTSDLIDHSIQVGVSGLYDRL 635 (1022)
T ss_pred CchHHHhHhhhhccccCch--hhhhHHHHHHHHHhcCHHHhcCCCCcchhhhHHHHHHHHHhhhhhhhhcccccccchhh
Confidence 3344555555666555442 23334444444433 4665543 345555444433322222 23567
Q ss_pred EEEEEeccCCChHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHhhcCC-CCCCCC--CCChH
Q 010447 160 MGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPL--LAPES 236 (510)
Q Consensus 160 ~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~l~~~~~~~-~~~~~~--~~~~~ 236 (510)
+.+.+.+..++.+..++++..++....||++.+....+++..++..++.|....+.......+|+. .+.... +--+.
T Consensus 636 vn~~Ikv~a~~Y~~~v~Wi~~~l~~~VfD~~Ri~~~~~~~l~~i~~~KRdg~~vlss~~~~~lY~~~slk~s~d~L~~Ek 715 (1022)
T KOG0961|consen 636 VNLRIKVGADKYPLLVKWIQIFLQGVVFDPSRIHQCAQKLLGEIRDRKRDGCTVLSSAVASMLYGKNSLKISFDELVLEK 715 (1022)
T ss_pred eeEEEEEccCCcchhHHHHHHHhhhhccCHHHHHHHHHHHHhhhhhhhcCccEehHHHHHHHHhcccchhhcccHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999975 443332 11112
Q ss_pred HhccCC----------HHHHHHHHHhhcCCCCeEEEEcC-CC-HHHHHHHHHhhcCCCCCCCCCCCC---------CCc-
Q 010447 237 AINRLN----------STLLEEFVAENYTGPRMVLAASG-VE-HDQLVSVAEPLLSDLPSIHPREEP---------KSV- 294 (510)
Q Consensus 237 ~l~~l~----------~~~l~~f~~~~~~~~~~~l~i~G-v~-~~~~~~~~~~~~~~l~~~~~~~~~---------~~~- 294 (510)
-+..|. .+.++...+-....+.+.+.++| ++ .++...-....+.+..-+.+.... .+.
T Consensus 716 ~l~ei~~~v~n~~~~Il~~~e~mR~y~l~~n~~~ihvvgDI~kid~~~~~Wn~l~~~~~~~nP~~~f~~tf~~~~~~s~e 795 (1022)
T KOG0961|consen 716 LLEEISKDVMNNPEAILEKLEQMRSYALFSNGVNIHVVGDIDKIDPKMLSWNWLQADPRFGNPGHQFSATFEAGENVSLE 795 (1022)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHhhcceEEEEEeehhcCCccccCchhhhcCcccCCchhhcccccccCccccee
Confidence 223332 12333333323356778899999 64 232222223333222111111111 111
Q ss_pred cCCC--ceEEe-cCCCCCceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEE
Q 010447 295 YTGG--DYRCQ-ADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQS 371 (510)
Q Consensus 295 ~~~~--~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~~~Y~ 371 (510)
+..+ ...+. +.+ +.+.+...-+....| .+++.+...++.++|+. |.+++|+.+|-. |++|+
T Consensus 796 ~gsssk~~~I~~p~s--ESs~l~~sip~~~~w-~dpel~~~~l~~~YL~~------------~eGPfW~~IRG~-GLAYG 859 (1022)
T KOG0961|consen 796 LGSSSKELLIGVPGS--ESSFLYQSIPLDANW-NDPELIPAMLFGQYLSQ------------CEGPFWRAIRGD-GLAYG 859 (1022)
T ss_pred ccCCcceeEecCCCc--cccceeeeccccccc-CCcchhHHHHHHHHHHh------------cccchhhhhccc-chhcc
Confidence 1111 22333 444 555555555555568 56899999999999997 568999999987 89998
Q ss_pred EEEeecCCCCcceEEEEEEeCcchHHHHHHHHHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 010447 372 FSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVAT-PGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQV 450 (510)
Q Consensus 372 v~a~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~l~~l~~-~~~~t~~el~~ak~~~~~~~~~~~~s~~~~~~~~~~~~ 450 (510)
++.+..+..+.-.|.||...+|.+ +.+.-.+.++++.. .+++++.+|+-||......+..-....-+-+..+.-..
T Consensus 860 anm~~~~d~~~~~~~iyr~ad~~k---aye~~rdiV~~~vsG~~e~s~~~~egAk~s~~~~~~~~Eng~~~~a~~~~~l~ 936 (1022)
T KOG0961|consen 860 ANMFVKPDRKQITLSIYRCADPAK---AYERTRDIVRKIVSGSGEISKAEFEGAKRSTVFEMMKRENGTVSGAAKISILN 936 (1022)
T ss_pred ceeEEeccCCEEEEEeecCCcHHH---HHHHHHHHHHHHhcCceeecHHHhccchHHHHHHHHHHhccceechHHHHHHH
Confidence 888877777766777777776654 45555555555555 24699999999999988877543322111111111111
Q ss_pred HhcCCCC-CHHHHHHHHhcCCHHHHHHHHHHHhc
Q 010447 451 LTYGERK-PVEHFLKTVEGVTAKDIASVAQKLLS 483 (510)
Q Consensus 451 ~~~~~~~-~~~~~~~~i~~vT~~di~~~a~~~l~ 483 (510)
...+.+. ....+++.|.+||.+|+.+..+.|+.
T Consensus 937 ~~~q~~~~fn~~~leri~nvT~~~~~~~~~~y~~ 970 (1022)
T KOG0961|consen 937 NFRQTPHPFNIDLLERIWNVTSEEMVKIGGPYLA 970 (1022)
T ss_pred HHHhcCCcccHHHHHHHHHhhHHHHHHhccccee
Confidence 2233333 35789999999999999999887765
No 22
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=98.53 E-value=2.8e-06 Score=80.51 Aligned_cols=135 Identities=21% Similarity=0.264 Sum_probs=87.2
Q ss_pred CCCCCCCCCCCceEEEEcCCCcEEEEecCCC-CeEEEEEEEcccccCCCCCCCcHHHHHHHhhc-cCCCCCChHHHHHHH
Q 010447 67 PPSLPDYVEPGKTKISTLPNGVKIASETSVS-PVASISLYVGCGSIYESPISFGTTHLLERMAF-RSTRNRSHLRIVREV 144 (510)
Q Consensus 67 p~~~~~~~~~~~~~~~~L~NGl~v~~~~~~~-~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~-~gt~~~s~~~l~~~l 144 (510)
..+++...+..++.+..+ +|++|++.+.++ ..+++.++|+.+.... +......|+..++. .||+++++.++...+
T Consensus 59 ~~Di~~~~~~~~~~~~~~-~~~~v~~~~~~TnGI~Y~~l~fdl~~l~~--e~l~yl~Ll~~ll~~lgT~~~sy~el~~~i 135 (248)
T PF08367_consen 59 LSDIPREIEKIPLEVEKL-GGIPVLFHEQPTNGIVYVRLYFDLSDLPE--EDLPYLPLLTDLLGELGTKNYSYEELSNEI 135 (248)
T ss_dssp GGGS-SS------EECCC-TTCEEEEEE---TTEEEEEEEEE-TTS-C--CCHCCHHHHHHHCCCS-BSSS-HHHHHHHH
T ss_pred HHhcCCCCCCCCceeeec-CCccEEEEEcCCCCeEEEEEEecCCCCCH--HHHHhHHHHHHHHHhCCCCCCCHHHHHHHH
Confidence 445555555555555544 789999877664 5999999999995554 34444555556654 599999999999999
Q ss_pred HHcCCeeeEeec-----------ceeEEEEEeccCCChHHHHHHHHHhhhCCCCCHH-HHHHHHHHHHHHHH
Q 010447 145 EAIGGNVQASAS-----------REQMGYSFDALKTYVPEMVELLIDCVRNPVFLDW-EVNEQLTKVKSEIS 204 (510)
Q Consensus 145 ~~~g~~~~~~~~-----------~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~-~~~~~k~~~~~e~~ 204 (510)
..+-|++++++. ..++.+++.|+.++++++++++.+++.++.|++. .+.......+..+.
T Consensus 136 ~~~tGGis~~~~~~~~~~~~~~~~~~l~is~k~L~~~~~~~~~ll~eil~~~~f~d~~rl~~ll~~~~s~~~ 207 (248)
T PF08367_consen 136 DLYTGGISFSIEVYTDYDDDDKYRPYLVISAKCLDEKLDEAFELLSEILTETDFDDKERLKELLKELKSDME 207 (248)
T ss_dssp HHHSSEEEEEEEEEEEECTECCCEEEEEEEEEEEGGGHHHHHHHHHHHHHCB-TT-HHHHHHHHHHHHHHHH
T ss_pred HHhCCCeEEEeeeccCCCCccceeEEEEEEEEeHhhhHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHH
Confidence 998776666652 2368899999999999999999999999999876 33333333333333
No 23
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=98.45 E-value=5.5e-06 Score=81.26 Aligned_cols=185 Identities=19% Similarity=0.229 Sum_probs=115.8
Q ss_pred EEcCCCcEEEEecCCCCeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCChHHHHHHHHHcCCeeeEeecceeEE
Q 010447 82 STLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMG 161 (510)
Q Consensus 82 ~~L~NGl~v~~~~~~~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~~~~~~ 161 (510)
+.|+||+||...+.-...+++++. +.|.-.+-.+--|+|||+||++-. +++ .....||+|++.+|+
T Consensus 2 IvL~NGVRiFin~~M~KDIYlGIs-~FGFe~DI~~iLGiAHLLEHILIs----FD~---------~~F~ANASTaRsYMS 67 (590)
T PF03410_consen 2 IVLSNGVRIFINPSMKKDIYLGIS-NFGFENDIGEILGIAHLLEHILIS----FDS---------SKFLANASTARSYMS 67 (590)
T ss_pred eEecCceEEEecCccccceEEeec-ccccccchHHHHhHHHHHHHHeee----cch---------HHhhcccchhhhhhh
Confidence 579999999998887778888876 677666667788999999999753 122 222468999999999
Q ss_pred EEEeccCCC-hHHHHHHHHHhhhCC-----CCCHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHhhcCCCCCCCCCCCh
Q 010447 162 YSFDALKTY-VPEMVELLIDCVRNP-----VFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPE 235 (510)
Q Consensus 162 ~~~~~~~~~-l~~~l~ll~~~~~~p-----~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (510)
|.+.+.+.. -..+++.+...+..- .|+...++.....+..|+-- .|-.-..++.+.- +.+|.+-+ .|..
T Consensus 68 FWC~si~g~~~~DAvrtliSWFF~~g~Lk~~F~~~~i~~hikELENEYYF--RnEvfHCmDvLtf-L~gGDLYN--GGRi 142 (590)
T PF03410_consen 68 FWCKSIRGRTYIDAVRTLISWFFDNGKLKDNFSRSKIKNHIKELENEYYF--RNEVFHCMDVLTF-LGGGDLYN--GGRI 142 (590)
T ss_pred hhhhhccCCChhHHHHHHHHHhhcCCcccccccHhHHHHHHHHHhhhhhh--hhhHHHHHHHHHH-hcCCcccC--CchH
Confidence 999998865 345666666666442 25555554444444444332 2222233444332 22332222 2455
Q ss_pred HHhccCCHHHHHHHHHhhc---CCCCeEEEEcCCCHHHHHHHHHhhcCCCCCCCCC
Q 010447 236 SAINRLNSTLLEEFVAENY---TGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPR 288 (510)
Q Consensus 236 ~~l~~l~~~~l~~f~~~~~---~~~~~~l~i~Gv~~~~~~~~~~~~~~~l~~~~~~ 288 (510)
..|++++ ++.+...+.. ...|+++++=-++ +.++.++++.||.||.-+..
T Consensus 143 ~ML~~l~--~i~~mL~~RM~~I~GpniVIFVk~l~-~~~l~lL~~TFGtLP~cP~~ 195 (590)
T PF03410_consen 143 DMLNNLN--DIRNMLSNRMHRIIGPNIVIFVKELN-PNILSLLSNTFGTLPSCPLT 195 (590)
T ss_pred HHHhhhH--HHHHHHHHHHHhhcCCcEEEEEeccC-HHHHHHHHHhcCCCCCCccc
Confidence 6666653 3444333332 3455554443387 56788999999999976643
No 24
>PHA03081 putative metalloprotease; Provisional
Probab=98.23 E-value=2.8e-05 Score=76.51 Aligned_cols=185 Identities=17% Similarity=0.207 Sum_probs=116.8
Q ss_pred EEcCCCcEEEEecCCCCeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCChHHHHHHHHHcCCeeeEeecceeEE
Q 010447 82 STLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMG 161 (510)
Q Consensus 82 ~~L~NGl~v~~~~~~~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~~~~~~ 161 (510)
++|+||+||...+.-...+++++. +.|.-.+-.+--|++||+||++.. ++. .....|++|.+.+|+
T Consensus 2 i~~~ngvr~f~~~~m~kdiy~gi~-~fgfe~di~~~lg~ahllehili~----fd~---------~~f~anast~r~yms 67 (595)
T PHA03081 2 IVLSNGVRIFINPSMKKDIYLGIS-NFGFENDIGEILGIAHLLEHILIS----FDS---------SKFVANASTARSYMS 67 (595)
T ss_pred eEecCceEEEecCccccceEEeec-ccccccchHHHHhHHHHHHHHeee----cch---------HHhcccchhhhhhHh
Confidence 578999999998887778888876 667666666788999999999753 122 222468999999999
Q ss_pred EEEeccCCCh-HHHHHHHHHhhhCCCCCHHHH-----HHHHHHHHHHHHHhhCChHHHHHHHHHHhhcCCCCCCCCCCCh
Q 010447 162 YSFDALKTYV-PEMVELLIDCVRNPVFLDWEV-----NEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPE 235 (510)
Q Consensus 162 ~~~~~~~~~l-~~~l~ll~~~~~~p~f~~~~~-----~~~k~~~~~e~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (510)
|.+.+....- ..+++.+...+....--...| +.....+..|+- ..+-.-..++.+.- +.+|.+-+ .|..
T Consensus 68 fwc~sirg~~y~DAvrtliSWFF~~~~Lr~~F~~~~ik~~ikELENEYY--FRnEvfHCmDvLTf-L~gGDLYN--GGRi 142 (595)
T PHA03081 68 FWCKSIRGRSYIDAIRTLISWFFDNGKLKDNFSLSKIRNHIKELENEYY--FRNEVFHCMDVLTF-LGGGDLYN--GGRI 142 (595)
T ss_pred HhhHhhcCCchHHHHHHHHHHhccCCccccccchhhHHHHHHHHhhhhh--hhhhhHHHHHHHHH-hcCCcccC--CchH
Confidence 9988887543 678888888887766333333 333333333332 12222233444332 22332222 2455
Q ss_pred HHhccCCHHHHHHHHHhhc---CCCCeEEEEcCCCHHHHHHHHHhhcCCCCCCCCC
Q 010447 236 SAINRLNSTLLEEFVAENY---TGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPR 288 (510)
Q Consensus 236 ~~l~~l~~~~l~~f~~~~~---~~~~~~l~i~Gv~~~~~~~~~~~~~~~l~~~~~~ 288 (510)
..|+++ +++++...+.. ...|+++++=-++ +..+.++++.||.||.-+..
T Consensus 143 ~ML~~l--~~i~~~L~~RM~~I~GpniVIFVk~ln-~~~l~lL~~TFGtLP~~P~~ 195 (595)
T PHA03081 143 DMLDNL--NDVRDMLSNRMHRISGPNIVIFVKELN-PNTLSLLNNTFGTLPSCPET 195 (595)
T ss_pred HHHhhh--HHHHHHHHHHHHhhcCCcEEEEEeccC-HHHHHHHHHhcCCCCCCccc
Confidence 666665 34444444433 3455555444387 55788999999999976643
No 25
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=97.99 E-value=0.00027 Score=73.19 Aligned_cols=181 Identities=17% Similarity=0.169 Sum_probs=121.9
Q ss_pred CceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEEeecCCCCcceEEEE
Q 010447 309 QLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQ 388 (510)
Q Consensus 309 ~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~~~Y~v~a~~~~~~~~~~~~i~ 388 (510)
+...+.+.+.....+..........+|.+++..|.. +.| ..-+.+.+ ++.|.. ..|+.+... ..+ +
T Consensus 37 ~~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~---~~~----~~~i~~~~-~~~G~~--~na~ts~d~--t~y--~ 102 (438)
T COG0612 37 PTVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTT---GLP----SAELAEAF-EKLGGQ--LNAFTSFDY--TVY--Y 102 (438)
T ss_pred CEEEEEEEEeecccCCCCCcccHHHHHHHHHccCCC---CCC----hHHHHHHH-HHhcCe--eeccccchh--hhh--h
Confidence 556666666654434444556678889998875411 000 01455444 344433 234332221 112 2
Q ss_pred EEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCCC--CHHHHHHHH
Q 010447 389 GTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERK--PVEHFLKTV 466 (510)
Q Consensus 389 ~~~~p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~--~~~~~~~~i 466 (510)
+.+.+++..++++.+.+.+.+ -.+++++|++.|..++..+.+..+++...+.......+..+.+. ++.-..+.|
T Consensus 103 ~~~l~~~~~~~l~llad~l~~----p~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~~G~~e~I 178 (438)
T COG0612 103 LSVLPDNLDKALDLLADILLN----PTFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGTEESI 178 (438)
T ss_pred hhhchhhhHHHHHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCCCCCHHHH
Confidence 335678888888888877766 34999999999999999999999999988888777766444443 233457889
Q ss_pred hcCCHHHHHHHHHHHhc-CCceEEEEcCCCCCCCHHHHHhHh
Q 010447 467 EGVTAKDIASVAQKLLS-SPLTMASYGDVINVPSYDAVSSKF 507 (510)
Q Consensus 467 ~~vT~~di~~~a~~~l~-~~~~~~v~G~~~~~p~~~~i~~~~ 507 (510)
+++|++|++++.++|.. ++.+++++||...-.-.+.+.+.|
T Consensus 179 ~~it~~dl~~f~~k~Y~p~n~~l~vvGdi~~~~v~~~~~~~f 220 (438)
T COG0612 179 EAITREDLKDFYQKWYQPDNMVLVVVGDVDAEEVVELIEKYF 220 (438)
T ss_pred HhCCHHHHHHHHHHhcCcCceEEEEecCCCHHHHHHHHHHHH
Confidence 99999999999999999 999999999975443334444433
No 26
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=97.89 E-value=0.0016 Score=70.24 Aligned_cols=166 Identities=8% Similarity=-0.027 Sum_probs=109.7
Q ss_pred CceEEEEEEecCCCCCCC--cchHHHHHHHHhhCCCCCCCCCCCCCCcccH-HHHHHHhhcCCeEEEEEeecCCCCcceE
Q 010447 309 QLTHFVLAFELPGGWHKD--KDAMTLTVLQMLLGGGGSFSAGGPGKGMYSR-LYRRVLNEFPQVQSFSAFSNIYNHSGMF 385 (510)
Q Consensus 309 ~~~~v~~~~~~~~~~~~~--~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~-L~~~lRe~~~~~Y~v~a~~~~~~~~~~~ 385 (510)
+.+.+.+.+.... ..+ .......++.++|..|.. .+... =+.+..++.|..+ +++. +....
T Consensus 20 p~vav~l~v~aGS--~~Ep~~~~GLAHfLEHMLFkGT~--------~~~~~~~i~~~le~lGG~l--NA~T----s~d~T 83 (696)
T TIGR02110 20 KRAAALLRVAAGS--HDEPSAWPGLAHFLEHLLFLGGE--------RFQGDDRLMPWVQRQGGQV--NATT----LERTT 83 (696)
T ss_pred CEEEEEEEEeecc--CCCCCCCCcHHHHHHHHHhcCCC--------CCCcHHHHHHHHHHhCCeE--EEEE----cCCeE
Confidence 6677777777654 333 235567788888876521 12221 1334445566544 3332 22234
Q ss_pred EEEEEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCCC--CHHHHH
Q 010447 386 GIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERK--PVEHFL 463 (510)
Q Consensus 386 ~i~~~~~p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~--~~~~~~ 463 (510)
.+++.+.+++.+++++.+.+.+.+ -.++++++++.|..++..+....+++...+.......++.+.+. +..--.
T Consensus 84 ~y~~~v~~~~l~~aL~lLaD~l~~----P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt~ 159 (696)
T TIGR02110 84 AFFFELPAAALAAGLARLCDMLAR----PLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGSR 159 (696)
T ss_pred EEEEEecHHHHHHHHHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 567778888888888777666654 24999999999999999999988888877766555545333222 111123
Q ss_pred HHHhc---CCHHHHHHHHHHHhc-CCceEEEEcCC
Q 010447 464 KTVEG---VTAKDIASVAQKLLS-SPLTMASYGDV 494 (510)
Q Consensus 464 ~~i~~---vT~~di~~~a~~~l~-~~~~~~v~G~~ 494 (510)
+.|++ +|.+||+++.+++.. ++.+++|+||.
T Consensus 160 esL~~it~~t~edL~~F~~~~Y~p~NmvLvIvGdv 194 (696)
T TIGR02110 160 DSLALPNTAFQQALRDFHRRHYQAGNMQLWLQGPQ 194 (696)
T ss_pred HHHhCcccchHHHHHHHHHHhcchhcEEEEEEeCC
Confidence 44554 459999999999998 99999999996
No 27
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=96.78 E-value=0.035 Score=54.13 Aligned_cols=170 Identities=15% Similarity=0.124 Sum_probs=114.7
Q ss_pred CceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEEeecCCCCcceEEEE
Q 010447 309 QLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQ 388 (510)
Q Consensus 309 ~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~~~Y~v~a~~~~~~~~~~~~i~ 388 (510)
..+.|.+.+....-+-++++......|.++.-.| -..|--..|-.+ ....++..+.|...-.-..|
T Consensus 53 ~TATVGVwidaGSR~EnekNNG~ahFLEhlaFKG-----------T~~Rs~~alElE---ieniGahLNAytSReqT~yy 118 (467)
T KOG0960|consen 53 STATVGVWIDAGSRFENEKNNGTAHFLEHLAFKG-----------TKNRSQAALELE---IENIGAHLNAYTSREQTVYY 118 (467)
T ss_pred cceEEEEEeccCccccccccccHHHHHHHHHhcC-----------CCcchhHHHHHH---HHHHHHHhcccccccceeee
Confidence 5666777666655345778888999998854422 113322222211 11223443334333334457
Q ss_pred EEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCC--HHHHHHHH
Q 010447 389 GTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKP--VEHFLKTV 466 (510)
Q Consensus 389 ~~~~p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~i 466 (510)
+.|-+++++++++.+.+.+.+ ..+.+.++++-|..++..+....+.-....-++.....+.|.|.. +.--.+.|
T Consensus 119 akal~~dv~kavdiLaDIlqn----s~L~~s~IerER~vILrEmqevd~~~~eVVfdhLHatafQgtPL~~tilGp~enI 194 (467)
T KOG0960|consen 119 AKALSKDVPKAVDILADILQN----SKLEESAIERERDVILREMQEVDKNHQEVVFDHLHATAFQGTPLGRTILGPSENI 194 (467)
T ss_pred hhhccccchHHHHHHHHHHHh----CccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcccccccChhhhh
Confidence 788889999999988886665 348999999999999998887666655555455555555777753 45567889
Q ss_pred hcCCHHHHHHHHHHHhc-CCceEEEEcCCCC
Q 010447 467 EGVTAKDIASVAQKLLS-SPLTMASYGDVIN 496 (510)
Q Consensus 467 ~~vT~~di~~~a~~~l~-~~~~~~v~G~~~~ 496 (510)
++|+.+|++++++.... +..+++..|.++.
T Consensus 195 ~si~r~DL~~yi~thY~~~RmVlaaaGgV~H 225 (467)
T KOG0960|consen 195 KSISRADLKDYINTHYKASRMVLAAAGGVKH 225 (467)
T ss_pred hhhhHHHHHHHHHhcccCccEEEEecCCcCH
Confidence 99999999999998887 7888888887654
No 28
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=96.06 E-value=0.31 Score=41.95 Aligned_cols=128 Identities=16% Similarity=0.117 Sum_probs=85.2
Q ss_pred CceEEEEEEecCCCCCCCc--chHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEEeecCCCCcceEE
Q 010447 309 QLTHFVLAFELPGGWHKDK--DAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFG 386 (510)
Q Consensus 309 ~~~~v~~~~~~~~~~~~~~--~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~~~Y~v~a~~~~~~~~~~~~ 386 (510)
+.+.+.+.|.... ..++ ......++..++..+. +++.+.-+.+..++.|..+.+... .....
T Consensus 11 ~~~~~~l~~~~Gs--~~e~~~~~G~a~ll~~l~~~gs--------~~~~~~~l~~~l~~~G~~~~~~t~------~d~t~ 74 (149)
T PF00675_consen 11 PVVSVSLVFKAGS--RYEPPGKPGLAHLLEHLLFRGS--------KKYSSDELQEELESLGASFNASTS------RDSTS 74 (149)
T ss_dssp SEEEEEEEES-SG--GGSCTTTTTHHHHHHHHTTSBB--------SSSBHHHHHHHHHHTTCEEEEEEE------SSEEE
T ss_pred CEEEEEEEEeecc--CCCCCCCCchhhhhhhhccccc--------chhhhhhhHHHhhhhccccceEec------ccceE
Confidence 6788888887665 3332 3467788888777652 223333333445556766644442 23466
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCC
Q 010447 387 IQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGER 456 (510)
Q Consensus 387 i~~~~~p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 456 (510)
+++.+.+++..++++.+.+.+..- .+++++|++.|..+...+....+++...+..........+.+
T Consensus 75 ~~~~~~~~~~~~~l~~l~~~~~~P----~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p 140 (149)
T PF00675_consen 75 YSASVLSEDLEKALELLADMLFNP----SFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRGHP 140 (149)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHSB----GGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSG
T ss_pred EEEEEecccchhHHHHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhccCC
Confidence 778888888888888888777762 499999999999999999888777766665555555544443
No 29
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=95.07 E-value=0.37 Score=47.29 Aligned_cols=162 Identities=17% Similarity=0.088 Sum_probs=104.6
Q ss_pred eEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCC--------hHHH-------HHHHHHcCCeeeEeecceeEEEE
Q 010447 99 VASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRS--------HLRI-------VREVEAIGGNVQASASREQMGYS 163 (510)
Q Consensus 99 ~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s--------~~~l-------~~~l~~~g~~~~~~~~~~~~~~~ 163 (510)
...+.+-+.+.+..++ +......+ .|+..|-+.+| +.+| ..+++...+..+.+.+..-+++.
T Consensus 264 ltHv~lg~Eg~~~~de--D~v~~avL-q~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sctAfnhsy~DtGlfgi~ 340 (472)
T KOG2067|consen 264 LTHVVLGFEGCSWNDE--DFVALAVL-QMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCTAFNHSYSDTGLFGIY 340 (472)
T ss_pred eeeeeEeeccCCCCCh--hHHHHHHH-HHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHhhhhhccccCCceeEEe
Confidence 4556666666665554 33333334 44444444443 1122 12344445556667777789999
Q ss_pred EeccCCChHHHHHHHHHhhhCCC--CCHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHhhcCCCCCCCCCCChHHhccC
Q 010447 164 FDALKTYVPEMVELLIDCVRNPV--FLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRL 241 (510)
Q Consensus 164 ~~~~~~~l~~~l~ll~~~~~~p~--f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~l 241 (510)
++++++...++++++..-+.+.. .+++++++.|.+++..+-.+..+-.-.+-+.-++.+-.+.+. +...-.+.|+++
T Consensus 341 ~s~~P~~a~~aveli~~e~~~~~~~v~~~el~RAK~qlkS~LlMNLESR~V~~EDvGRQVL~~g~rk-~p~e~~~~Ie~l 419 (472)
T KOG2067|consen 341 ASAPPQAANDAVELIAKEMINMAGGVTQEELERAKTQLKSMLLMNLESRPVAFEDVGRQVLTTGERK-PPDEFIKKIEQL 419 (472)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccccchhHHHHhHHHHhccCcC-CHHHHHHHHHhc
Confidence 99999999999999987776633 889999999999999888754443334556666655322222 222234788999
Q ss_pred CHHHHHHHHHhhcCCCCeEEEEcC
Q 010447 242 NSTLLEEFVAENYTGPRMVLAASG 265 (510)
Q Consensus 242 ~~~~l~~f~~~~~~~~~~~l~i~G 265 (510)
+.+|+.++..+.++.. -++...|
T Consensus 420 t~~DI~rva~kvlt~~-p~va~~G 442 (472)
T KOG2067|consen 420 TPSDISRVASKVLTGK-PSVAAFG 442 (472)
T ss_pred CHHHHHHHHHHHhcCC-ceeccCC
Confidence 9999999999988533 3555556
No 30
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=85.57 E-value=7.2 Score=34.01 Aligned_cols=108 Identities=17% Similarity=0.180 Sum_probs=64.6
Q ss_pred CcEEEEecCCCCeEEEEEEEcccccCCCCCCCcHHHHHHHhhccCCCCCChHHHHHHHH-HcCCeeeEeec------cee
Q 010447 87 GVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVE-AIGGNVQASAS------REQ 159 (510)
Q Consensus 87 Gl~v~~~~~~~~~~~i~l~~~~Gs~~e~~~~~g~a~ll~~l~~~gt~~~s~~~l~~~l~-~~g~~~~~~~~------~~~ 159 (510)
+..+.....+.+...+.+.+.+...... .......++.+++..+ ....+...+. ..|..+++.++ ...
T Consensus 67 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~l~~~l~~~----~~s~l~~~lr~~~~l~y~v~~~~~~~~~~~~ 141 (184)
T PF05193_consen 67 GKEIVIPSKDESQSIVSIAFPGPPIKDS-KDYFALNLLSSLLGNG----MSSRLFQELREKQGLAYSVSASNSSYRDSGL 141 (184)
T ss_dssp EEEEEEEESSSSSEEEEEEEEEEETGTS-TTHHHHHHHHHHHHCS----TTSHHHHHHHTTTTSESEEEEEEEEESSEEE
T ss_pred cccccccccccccccccccccccccccc-chhhHHHHHHHHHhcC----ccchhHHHHHhccccceEEEeeeeccccceE
Confidence 3344444444355555666666555222 3556778888888665 2335555565 44433333222 244
Q ss_pred EEEEEeccCCChHHHHHHHHHhhhC---CCCCHHHHHHHHHHH
Q 010447 160 MGYSFDALKTYVPEMVELLIDCVRN---PVFLDWEVNEQLTKV 199 (510)
Q Consensus 160 ~~~~~~~~~~~l~~~l~ll~~~~~~---p~f~~~~~~~~k~~~ 199 (510)
+.+.+.+.++++.++++.+.+.+.. -.+++++|++.|..+
T Consensus 142 ~~i~~~~~~~~~~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 142 FSISFQVTPENLDEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp EEEEEEEEGGGHHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred EEEEEEcCcccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 7778888888888887777666644 348999999988653
No 31
>KOG1374 consensus Gamma tubulin [Cytoskeleton]
Probab=81.17 E-value=4.2 Score=39.87 Aligned_cols=171 Identities=20% Similarity=0.219 Sum_probs=91.3
Q ss_pred HHHHHHHhhCCCCCC--------CCCCCCCCcccHHHHHHHhhcC----CeEEEEEeecCCCCc------ceEEE-EEEe
Q 010447 331 TLTVLQMLLGGGGSF--------SAGGPGKGMYSRLYRRVLNEFP----QVQSFSAFSNIYNHS------GMFGI-QGTT 391 (510)
Q Consensus 331 ~~~vl~~lL~~~~s~--------~~~~pg~~~~s~L~~~lRe~~~----~~Y~v~a~~~~~~~~------~~~~i-~~~~ 391 (510)
.++++..=..+..|| -|||.|.||.+.|.++|++.+. ..|+|........+. .++.+ ...-
T Consensus 118 ImdiIdrEad~~DsleGF~l~hSiAGGTGSGlGS~llErL~drypkkliqtysVfPn~d~ssdVVVQpYNsiLtL~rL~~ 197 (448)
T KOG1374|consen 118 IMDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSFLLERLNDRYPKKLVQTYSVFPNQDESSDVVVQPYNSILTLKRLTE 197 (448)
T ss_pred HHHHHHHhhcCCCcccceeEEEeecCCCCcchHHHHHHHHHHhchhhhheeeeeccCCCCccceEEecchHHHHHHHHhh
Confidence 445555555666665 5999999999999999999765 467665443111110 00100 0000
Q ss_pred Ccch----HHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHh------------cCC
Q 010447 392 GSDF----VSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLT------------YGE 455 (510)
Q Consensus 392 ~p~~----~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~~~~~~~~~~~~~~------------~~~ 455 (510)
+++. -..++..+....-+ . +.+|=.+++......++.-...+..+.+....+..-+.. .-.
T Consensus 198 nsD~vVVlDN~AL~ria~~~l~--i-~~ptF~~iNqLvstims~st~t~r~p~Ym~n~l~~l~~~LiP~P~lhfl~~~~t 274 (448)
T KOG1374|consen 198 NSDCVVVLDNTALHRIAADRLH--I-QNPTFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLYASLIPTPELHFLMTGYT 274 (448)
T ss_pred CCCeEEEeccHHHHHHHHHHhc--C-CCCCHHHHHHHHHHHHhhccccccchhhccCcHHHHHhhcCCCCCeeeeeccCC
Confidence 1110 01123333333333 3 347878887777777776666666666655555433221 111
Q ss_pred CCCHHHHHHHHhcCCHHHHHHHHHHHhcCCceEEEEc-CCCCCCCHHHHHhH
Q 010447 456 RKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG-DVINVPSYDAVSSK 506 (510)
Q Consensus 456 ~~~~~~~~~~i~~vT~~di~~~a~~~l~~~~~~~v~G-~~~~~p~~~~i~~~ 506 (510)
|...+..... +++..-+-++.+++|..+-.++..+ +....|.|-.|...
T Consensus 275 P~~sd~~~~~--~~rkttvldvmRrLL~pkn~mvs~~~~~~~~~~~~si~n~ 324 (448)
T KOG1374|consen 275 PLTSDNSLAT--AVRKTTVLDVMRRLLQPKNMMVSTADDLSGNPCYISILNI 324 (448)
T ss_pred cccChhhhhh--hhhcchHHHHHHHHhCcchhhhhccccccCCcchHhHHhh
Confidence 1111222222 4666667777888888444444444 46677777666543
No 32
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=77.83 E-value=66 Score=32.20 Aligned_cols=168 Identities=11% Similarity=0.071 Sum_probs=92.8
Q ss_pred CCCCCceEEEEEEecCCCCCCCcch--HHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEEeecCCCCc
Q 010447 305 DSGDQLTHFVLAFELPGGWHKDKDA--MTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHS 382 (510)
Q Consensus 305 ~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~~~Y~v~a~~~~~~~~ 382 (510)
+.+.+.+.+.+.|.... +.++.. ....+|...-+.... +..=+.-+|+-.+.+ .......+.
T Consensus 38 e~~~~is~l~l~~~AGS--RYe~~~~~G~sHllr~f~g~~Tq----------~~sal~ivr~se~~G----G~Lss~~tR 101 (429)
T KOG2583|consen 38 EAPTAISSLSLAFRAGS--RYEPADQQGLSHLLRNFVGRDTQ----------ERSALKIVRESEQLG----GTLSSTATR 101 (429)
T ss_pred cCCCcceEEEEEEecCc--cCCccccccHHHHHHHhcccCcc----------ccchhhhhhhhHhhC----ceeeeeeec
Confidence 33337899999998876 434433 555666655443211 022234456654432 333333455
Q ss_pred ceEEEEEEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCChHHHH-HHHHHHHHhcCCCCCHHH
Q 010447 383 GMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVS-EDIGRQVLTYGERKPVEH 461 (510)
Q Consensus 383 ~~~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~~ 461 (510)
-.|++.+.+..++++-.+. .|.++..+..|-+=||+......+ ......+++...+ +++-......|.-.++.-
T Consensus 102 e~~~~tvt~lrd~~~~~l~----~L~~V~~~paFkPwEl~D~~~~ti-~~~l~~~t~~~~a~e~lH~aAfRngLgnslY~ 176 (429)
T KOG2583|consen 102 ELIGLTVTFLRDDLEYYLS----LLGDVLDAPAFKPWELEDVVLATI-DADLAYQTPYTIAIEQLHAAAFRNGLGNSLYS 176 (429)
T ss_pred ceEEEEEEEecccHHHHHH----HHHHhhcccCcCchhhhhhhhhhh-HHHhhhcChHHHHHHHHHHHHHhcccCCcccC
Confidence 6788888888777654444 444444422455556655553111 1223344554443 444333333443333222
Q ss_pred HHHHHhcCCHHHHHHHHHHHhc-CCceEEEEcC
Q 010447 462 FLKTVEGVTAKDIASVAQKLLS-SPLTMASYGD 493 (510)
Q Consensus 462 ~~~~i~~vT~~di~~~a~~~l~-~~~~~~v~G~ 493 (510)
-.-.+.+++.+||..|+.+.+- .+..++-+|.
T Consensus 177 p~~~vg~vss~eL~~Fa~k~fv~gn~~lvg~nv 209 (429)
T KOG2583|consen 177 PGYQVGSVSSSELKDFAAKHFVKGNAVLVGVNV 209 (429)
T ss_pred CcccccCccHHHHHHHHHHHhhccceEEEecCC
Confidence 2235999999999999998887 7777766664
No 33
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=72.31 E-value=7.1 Score=23.51 Aligned_cols=25 Identities=16% Similarity=0.284 Sum_probs=18.5
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHH
Q 010447 405 RELISVATPGEVDQVQLDRAKQSTK 429 (510)
Q Consensus 405 ~~l~~l~~~~~~t~~el~~ak~~~~ 429 (510)
+.+..+...|.+|++|+++.|..++
T Consensus 6 ~~L~~l~~~G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 6 EKLKELYDKGEISEEEYEQKKARLL 30 (31)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHh
Confidence 3444444448899999999998865
No 34
>COG5023 Tubulin [Cytoskeleton]
Probab=65.38 E-value=60 Score=32.15 Aligned_cols=127 Identities=17% Similarity=0.190 Sum_probs=72.3
Q ss_pred CCCCCCCCcccHHHHHHHhhcC----CeEEEEEeec-------CCCCcceEEEEE-----EeC--cchHHHHHHHHHHHH
Q 010447 346 SAGGPGKGMYSRLYRRVLNEFP----QVQSFSAFSN-------IYNHSGMFGIQG-----TTG--SDFVSKAIDLAAREL 407 (510)
Q Consensus 346 ~~~~pg~~~~s~L~~~lRe~~~----~~Y~v~a~~~-------~~~~~~~~~i~~-----~~~--p~~~~~~~~~~~~~l 407 (510)
-+||.|.||.+-|..+||++++ +.|+|.-... +|+ ..+.++. .|. -++ +.+.+...
T Consensus 139 ~gGGTGSG~GslLLerl~~eypkK~~~tfSV~P~p~~Sd~VVePYN--svLt~h~l~ensD~tf~~DN-eal~di~~--- 212 (443)
T COG5023 139 LGGGTGSGLGSLLLERLREEYPKKIKLTFSVFPAPKVSDVVVEPYN--SVLTLHRLLENSDCTFVVDN-EALYDICR--- 212 (443)
T ss_pred ccCcCcccHHHHHHHHHHHhcchhheeEEEeccCCccCcceecccH--HHHHHHHHHhcCCceEEech-HHHHHHHH---
Confidence 4789999999999999999876 3555532111 111 1111110 000 011 11222222
Q ss_pred HHhhCCCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCC------------HHHHHHHHhcCCHHHHH
Q 010447 408 ISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKP------------VEHFLKTVEGVTAKDIA 475 (510)
Q Consensus 408 ~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~vT~~di~ 475 (510)
+.+.. +.++=+++++.+..+.+.....+.=+.+...++..-.. .--|.+ .....+..++.|..||
T Consensus 213 ~~L~i-~~P~y~~lN~LIs~VmSsvTtslRfpG~ln~dl~~~~~-nLVP~PrlHF~l~sytP~~s~~~~~~~~~sv~ev- 289 (443)
T COG5023 213 RNLRI-QNPSYDDLNQLISTVMSSVTTSLRFPGYLNVDLRSIQT-NLVPYPRLHFPLVSYTPFTSDGSAAHEKNSVSEV- 289 (443)
T ss_pred HhcCC-CCCChHHHHHHHHHHHHhhhheeecCccccchHHHHHh-cCCCCCcccccccccCcccchhhHHHhcccHHHH-
Confidence 23334 45899999999999999999888877777666644322 222221 1233456777776655
Q ss_pred HHHHHHhc
Q 010447 476 SVAQKLLS 483 (510)
Q Consensus 476 ~~a~~~l~ 483 (510)
.++.|.
T Consensus 290 --t~~~f~ 295 (443)
T COG5023 290 --TNQLFD 295 (443)
T ss_pred --HHHHhC
Confidence 556665
No 35
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=53.27 E-value=2e+02 Score=27.01 Aligned_cols=115 Identities=18% Similarity=0.180 Sum_probs=69.0
Q ss_pred CceEEEEEEecCCCCCCCcchHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHhhcC-CeEEEEEeecCC---CCcce
Q 010447 309 QLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFP-QVQSFSAFSNIY---NHSGM 384 (510)
Q Consensus 309 ~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~s~~~~~pg~~~~s~L~~~lRe~~~-~~Y~v~a~~~~~---~~~~~ 384 (510)
.-+++.+.|..+. ...++..-+.++..+|+..|. ++-=+..|-..+...-| ...++.+..... .-...
T Consensus 90 GI~Y~~l~fdl~~--l~~e~l~yl~Ll~~ll~~lgT------~~~sy~el~~~i~~~tGGis~~~~~~~~~~~~~~~~~~ 161 (248)
T PF08367_consen 90 GIVYVRLYFDLSD--LPEEDLPYLPLLTDLLGELGT------KNYSYEELSNEIDLYTGGISFSIEVYTDYDDDDKYRPY 161 (248)
T ss_dssp TEEEEEEEEE-TT--S-CCCHCCHHHHHHHCCCS-B------SSS-HHHHHHHHHHHSSEEEEEEEEEEEECTECCCEEE
T ss_pred CeEEEEEEecCCC--CCHHHHHhHHHHHHHHHhCCC------CCCCHHHHHHHHHHhCCCeEEEeeeccCCCCccceeEE
Confidence 6889999999986 677888889999999997632 22223344444444444 223333333321 12356
Q ss_pred EEEEEEeCcchHHHHHHHHHHHHHHhhCCCCCCHH-HHHHHHHHHHHHHHHh
Q 010447 385 FGIQGTTGSDFVSKAIDLAARELISVATPGEVDQV-QLDRAKQSTKSAILMN 435 (510)
Q Consensus 385 ~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~~~t~~-el~~ak~~~~~~~~~~ 435 (510)
|.+.+.|-.+++.++++.+.+.+.+. .+++. .+.......+..+...
T Consensus 162 l~is~k~L~~~~~~~~~ll~eil~~~----~f~d~~rl~~ll~~~~s~~~~~ 209 (248)
T PF08367_consen 162 LVISAKCLDEKLDEAFELLSEILTET----DFDDKERLKELLKELKSDMESS 209 (248)
T ss_dssp EEEEEEEEGGGHHHHHHHHHHHHHCB-----TT-HHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeHhhhHHHHHHHHHHHHhcc----CCCcHHHHHHHHHHHHHHHHHh
Confidence 77888888999999999988888763 37665 3444444444444433
No 36
>COG0012 Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis]
Probab=35.41 E-value=2.7e+02 Score=27.86 Aligned_cols=41 Identities=10% Similarity=0.204 Sum_probs=28.4
Q ss_pred CCCcccHHHHHHHhhcCCeEEEEEeecCCCCcceEEEEEEeCcch
Q 010447 351 GKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDF 395 (510)
Q Consensus 351 g~~~~s~L~~~lRe~~~~~Y~v~a~~~~~~~~~~~~i~~~~~p~~ 395 (510)
|.||...+...||+-...+.-|.|+-... .-.+....+|-.
T Consensus 84 GeGLGNkFL~~IRevdaI~hVVr~f~d~d----i~hv~~~vDP~~ 124 (372)
T COG0012 84 GEGLGNKFLDNIREVDAIIHVVRCFGDTD----IEHVEGKVDPVE 124 (372)
T ss_pred CCCcchHHHHhhhhcCeEEEEEEecCCCc----ccCCCCCcCcHH
Confidence 56777999999999988888888875422 223333367743
No 37
>PRK11032 hypothetical protein; Provisional
Probab=31.79 E-value=87 Score=27.23 Aligned_cols=38 Identities=11% Similarity=0.185 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHh
Q 010447 395 FVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMN 435 (510)
Q Consensus 395 ~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~ 435 (510)
.+.++++.+.+.+... +.+|++|++.+++.++..+..-
T Consensus 25 ~l~~~ve~a~~~~~~~---~elT~dEl~lv~~ylkRDL~ef 62 (160)
T PRK11032 25 DIDALVESARKRVDAA---GELTRDEVDLITRAVRRDLEEF 62 (160)
T ss_pred HHHHHHHHHHHHHHHH---HhcCHHHHHHHHHHHHHHHHHH
Confidence 3666677777666654 4599999999999998887653
No 38
>PF05120 GvpG: Gas vesicle protein G ; InterPro: IPR007804 Gas vesicles are intracellular, protein-coated, and hollow organelles found in cyanobacteria and halophilic archaea. They are permeable to ambient gases by diffusion and provide buoyancy, enabling cells to move upwards in water to access oxygen and/or light. Proteins containing this family are involved in the formation of gas vesicles [].
Probab=29.91 E-value=1.5e+02 Score=22.37 Aligned_cols=38 Identities=11% Similarity=0.218 Sum_probs=25.4
Q ss_pred cchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH
Q 010447 393 SDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILM 434 (510)
Q Consensus 393 p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~ 434 (510)
|+.+.+.+..+...+. .|.+|++++++....++..+..
T Consensus 30 p~~i~~~L~~L~~~~e----~GEIseeEf~~~E~eLL~rL~~ 67 (79)
T PF05120_consen 30 PAAIRRELAELQEALE----AGEISEEEFERREDELLDRLEE 67 (79)
T ss_pred HHHHHHHHHHHHHHHH----cCCCCHHHHHHHHHHHHHHHHH
Confidence 4444444444333333 2889999999999998877754
No 39
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=29.04 E-value=6.1e+02 Score=25.51 Aligned_cols=102 Identities=23% Similarity=0.145 Sum_probs=53.5
Q ss_pred EEEEEeCcchHHHHHHHHHHHHHH--------hhCCCCCCHHHHHHHHHHHHHHHHH--hcCCh-HHHH-HHHHHHHHhc
Q 010447 386 GIQGTTGSDFVSKAIDLAARELIS--------VATPGEVDQVQLDRAKQSTKSAILM--NLESR-MVVS-EDIGRQVLTY 453 (510)
Q Consensus 386 ~i~~~~~p~~~~~~~~~~~~~l~~--------l~~~~~~t~~el~~ak~~~~~~~~~--~~~s~-~~~~-~~~~~~~~~~ 453 (510)
.+-+.|-|.+. +++...+.+.. ++..|.++++-|++..+. .+.. ..+|. ..+. ..+....+ .
T Consensus 182 ~~afDtGPgN~--liD~~~~~~~~~~~D~~G~~A~~G~v~~~lL~~ll~~---pff~~~pPKStgrE~F~~~~~~~~l-~ 255 (365)
T PRK09585 182 VIGFDTGPGNA--LIDAWIQRHGGKPYDKDGAWAASGKVDEALLARLLAH---PYFALPPPKSTGRELFNLAWLERQL-A 255 (365)
T ss_pred eeEecCChhHH--HHHHHHHHHhCCCCCCCChHHhCCCCCHHHHHHHhcC---ccccCCCCCccChhhcCHHHHHHHH-H
Confidence 46778889876 56666666542 222255666555544322 1111 11111 1111 12222222 1
Q ss_pred CCCCCHHHHHHHHhcCCHHHHHHHHHHHhcCCceEEEEcC
Q 010447 454 GERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGD 493 (510)
Q Consensus 454 ~~~~~~~~~~~~i~~vT~~di~~~a~~~l~~~~~~~v~G~ 493 (510)
....+.++....+-.+|.+.|.+.++++......+++.|-
T Consensus 256 ~~~~s~~D~~aTlt~~TA~sI~~~~~~~~~~~~~vlv~GG 295 (365)
T PRK09585 256 GFGLSPEDVQATLTELTAASIARAVRRLPPGPDELLVCGG 295 (365)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEECC
Confidence 2224678888888889999998888766543334556553
No 40
>PLN00221 tubulin alpha chain; Provisional
Probab=28.95 E-value=51 Score=34.19 Aligned_cols=41 Identities=22% Similarity=0.387 Sum_probs=29.8
Q ss_pred HHHHHHHHhhCCCCCC--------CCCCCCCCcccHHHHHHHhhcCCeE
Q 010447 330 MTLTVLQMLLGGGGSF--------SAGGPGKGMYSRLYRRVLNEFPQVQ 370 (510)
Q Consensus 330 ~~~~vl~~lL~~~~s~--------~~~~pg~~~~s~L~~~lRe~~~~~Y 370 (510)
..++.+...+..-.++ -+||-|.|+.+++.+.||++++-.+
T Consensus 117 ~i~d~ir~~~E~cD~l~gf~i~~Sl~GGtGSGlgs~~le~l~d~y~~~~ 165 (450)
T PLN00221 117 LCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165 (450)
T ss_pred HHHHHHHHHHHhccCccceeEeeccCCCccchHHHHHHHHHHHhccccc
Confidence 3455555555544443 4678999999999999999987543
No 41
>PF07295 DUF1451: Protein of unknown function (DUF1451); InterPro: IPR009912 This family consists of several hypothetical bacterial proteins of around 160 residues in length. Members of this family contain four highly conserved cysteine resides toward the C-terminal region of the protein. The function of this family is unknown.
Probab=28.85 E-value=1.6e+02 Score=25.27 Aligned_cols=44 Identities=16% Similarity=0.159 Sum_probs=32.6
Q ss_pred cchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCCh
Q 010447 393 SDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESR 439 (510)
Q Consensus 393 p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~ 439 (510)
++.+.++++.+.+.+... +.+|++|++.++..++..+..-.+..
T Consensus 13 ~~~L~~~le~a~e~~~~~---~elT~eEl~lv~~ylkRDl~~~a~~~ 56 (146)
T PF07295_consen 13 EEELQEALEKAKEYLVAA---GELTREELALVSAYLKRDLEEFARYY 56 (146)
T ss_pred HHHHHHHHHHHHHHHHHH---hhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667777777776665 45999999999999998886644433
No 42
>cd02186 alpha_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino
Probab=28.67 E-value=62 Score=33.38 Aligned_cols=24 Identities=29% Similarity=0.480 Sum_probs=21.1
Q ss_pred CCCCCCCCcccHHHHHHHhhcCCe
Q 010447 346 SAGGPGKGMYSRLYRRVLNEFPQV 369 (510)
Q Consensus 346 ~~~~pg~~~~s~L~~~lRe~~~~~ 369 (510)
-+||-|.|+.++|.+.||++++..
T Consensus 140 l~GGTGSGlgs~l~e~l~d~y~~~ 163 (434)
T cd02186 140 FGGGTGSGFGSLLLERLSVDYGKK 163 (434)
T ss_pred cCCCcchhHHHHHHHHHHHhcCcc
Confidence 467899999999999999998744
No 43
>PTZ00010 tubulin beta chain; Provisional
Probab=28.65 E-value=47 Score=34.42 Aligned_cols=23 Identities=35% Similarity=0.697 Sum_probs=20.6
Q ss_pred CCCCCCCCcccHHHHHHHhhcCC
Q 010447 346 SAGGPGKGMYSRLYRRVLNEFPQ 368 (510)
Q Consensus 346 ~~~~pg~~~~s~L~~~lRe~~~~ 368 (510)
-.||-|.|+.+++.+.||++++.
T Consensus 139 l~GGTGSGlgs~l~e~L~dey~~ 161 (445)
T PTZ00010 139 LGGGTGSGMGTLLISKLREEYPD 161 (445)
T ss_pred cCCCccccHHHHHHHHHHhhCCc
Confidence 46889999999999999999883
No 44
>PTZ00335 tubulin alpha chain; Provisional
Probab=28.23 E-value=55 Score=33.90 Aligned_cols=40 Identities=23% Similarity=0.405 Sum_probs=29.9
Q ss_pred HHHHHHHHhhCCCCCCC--------CCCCCCCcccHHHHHHHhhcCCe
Q 010447 330 MTLTVLQMLLGGGGSFS--------AGGPGKGMYSRLYRRVLNEFPQV 369 (510)
Q Consensus 330 ~~~~vl~~lL~~~~s~~--------~~~pg~~~~s~L~~~lRe~~~~~ 369 (510)
..++.+...+..-.++. +||.|.|+.++|.+.||++++..
T Consensus 117 ~i~d~ir~~~E~cD~l~gf~i~~Sl~GGTGSGlgs~l~e~l~d~yp~~ 164 (448)
T PTZ00335 117 LCLDRIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKK 164 (448)
T ss_pred HHHHHHHHhHHhccCccceeEeeccCCCccchHHHHHHHHHHHhcccc
Confidence 34555666665555543 78999999999999999998743
No 45
>PLN00220 tubulin beta chain; Provisional
Probab=26.81 E-value=64 Score=33.43 Aligned_cols=39 Identities=26% Similarity=0.450 Sum_probs=28.4
Q ss_pred HHHHHHHhhCCCCCC--------CCCCCCCCcccHHHHHHHhhcCCe
Q 010447 331 TLTVLQMLLGGGGSF--------SAGGPGKGMYSRLYRRVLNEFPQV 369 (510)
Q Consensus 331 ~~~vl~~lL~~~~s~--------~~~~pg~~~~s~L~~~lRe~~~~~ 369 (510)
.++.+...+..-.++ -+||.|.|+.+++...||++++..
T Consensus 116 ~~d~ir~~~E~cd~l~gf~~~~sl~GGTGSG~gs~l~~~l~~~y~~~ 162 (447)
T PLN00220 116 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 162 (447)
T ss_pred HHHHHHHHHHhCcCcCceEEEEecCCCccccHHHHHHHHHHHhcccc
Confidence 445555555544432 568899999999999999998743
No 46
>PF11517 Nab2: Nuclear abundant poly(A) RNA-bind protein 2 (Nab2); InterPro: IPR021083 Nab2 is a yeast heterogeneous nuclear ribonucleoprotein that modulates poly(A) tail length and mRNA. This is the N-terminal domain of the protein which mediates interactions with the C-terminal globular domain, Myosin-like protein 1 and the mRNA export factor, Gfd1 []. The N-terminal domain of Nab2 shows a structure of a helical fold. The N-terminal domain of Nab2 is thought to mediate protein:protein interactions that facilitate the nuclear export of mRNA []. An essential hydrophobic Phe73 patch on the N-terminal domain is thought to be an important component of the interface between Nab2 and Mlp1 [].; PDB: 3LCN_B 2V75_A 2JPS_A.
Probab=24.52 E-value=3.5e+02 Score=21.32 Aligned_cols=44 Identities=20% Similarity=0.221 Sum_probs=26.8
Q ss_pred CChHHHHHHHHHHHHhcCCCCC-HHHHHHHHhcCCHHHHHHHHHH
Q 010447 437 ESRMVVSEDIGRQVLTYGERKP-VEHFLKTVEGVTAKDIASVAQK 480 (510)
Q Consensus 437 ~s~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~vT~~di~~~a~~ 480 (510)
++..+.+++|.-.+.++|.... .+++-...++|..+.+..+.+.
T Consensus 28 EDv~YVAEyIvlLisNggs~esivqELssLFD~vs~~~l~~VVQt 72 (107)
T PF11517_consen 28 EDVNYVAEYIVLLISNGGSVESIVQELSSLFDSVSTEALTDVVQT 72 (107)
T ss_dssp SSHHHHHHHHHHHHHTT--HHHHHHHHHHH-TTS-HHHHHHHHHH
T ss_pred ccHHHHHHHhheeeeCCCCHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 4567778888766665555554 3566667788888887776553
No 47
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2.4.2.19 from EC is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [, ]. Unlike IPR004393 from INTERPRO, this domain also includes the molybdenum transport system protein ModD.; GO: 0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity, 0009435 NAD biosynthetic process; PDB: 3C2O_A 3C2F_A 3C2E_A 3C2R_A 3C2V_A 1QPN_E 1QPO_A 1QPQ_F 1QPR_E 2I14_D ....
Probab=24.34 E-value=72 Score=28.09 Aligned_cols=42 Identities=24% Similarity=0.374 Sum_probs=33.4
Q ss_pred HHhccCCHHHHHHHHHhhc-CCCCeEEEEcC-CCHHHHHHHHHh
Q 010447 236 SAINRLNSTLLEEFVAENY-TGPRMVLAASG-VEHDQLVSVAEP 277 (510)
Q Consensus 236 ~~l~~l~~~~l~~f~~~~~-~~~~~~l~i~G-v~~~~~~~~~~~ 277 (510)
=.|++.+.+++++..+..- .+.++.+.++| ++.+.+.++++.
T Consensus 104 I~lD~~~~~~~~~~v~~l~~~~~~v~ie~SGGI~~~ni~~ya~~ 147 (169)
T PF01729_consen 104 IMLDNMSPEDLKEAVEELRELNPRVKIEASGGITLENIAEYAKT 147 (169)
T ss_dssp EEEES-CHHHHHHHHHHHHHHTTTSEEEEESSSSTTTHHHHHHT
T ss_pred EEecCcCHHHHHHHHHHHhhcCCcEEEEEECCCCHHHHHHHHhc
Confidence 3467888999999988654 45669999999 999999988764
No 48
>cd02187 beta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-
Probab=22.84 E-value=84 Score=32.35 Aligned_cols=39 Identities=26% Similarity=0.450 Sum_probs=27.8
Q ss_pred HHHHHHHhhCCCCCC--------CCCCCCCCcccHHHHHHHhhcCCe
Q 010447 331 TLTVLQMLLGGGGSF--------SAGGPGKGMYSRLYRRVLNEFPQV 369 (510)
Q Consensus 331 ~~~vl~~lL~~~~s~--------~~~~pg~~~~s~L~~~lRe~~~~~ 369 (510)
.++.+...+..-.++ -.||-|.|+.+++.+.||++++-.
T Consensus 115 i~d~ir~~~E~cD~l~gf~~~~sl~GGTGSG~gs~l~e~l~d~y~~~ 161 (425)
T cd02187 115 VLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDR 161 (425)
T ss_pred HHHHHHHhhccCCCcceEEEEeecCCCccccHHHHHHHHHHHhcCCc
Confidence 445555544433332 368899999999999999998744
No 49
>PTZ00387 epsilon tubulin; Provisional
Probab=21.13 E-value=1.7e+02 Score=30.59 Aligned_cols=41 Identities=24% Similarity=0.396 Sum_probs=30.3
Q ss_pred HHHHHHHHhhCCCCCC--------CCCCCCCCcccHHHHHHHhhcCCeE
Q 010447 330 MTLTVLQMLLGGGGSF--------SAGGPGKGMYSRLYRRVLNEFPQVQ 370 (510)
Q Consensus 330 ~~~~vl~~lL~~~~s~--------~~~~pg~~~~s~L~~~lRe~~~~~Y 370 (510)
..++.+...+..-.++ -.||-|.|+.+++.+.||++++..+
T Consensus 116 ~~~d~Ir~~~E~cD~l~gf~i~~slgGGTGSGlgs~lle~l~d~y~~~~ 164 (465)
T PTZ00387 116 SISESVRRQVEQCDSLQSFFLMHSLGGGTGSGLGTRILGMLEDEFPHVF 164 (465)
T ss_pred HHHHHHHHHHHhccCcceEEEEeecCCCcchhHHHHHHHHHHHhcccCc
Confidence 3455555555555554 4789999999999999999987554
No 50
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=20.25 E-value=77 Score=28.30 Aligned_cols=25 Identities=24% Similarity=0.602 Sum_probs=18.2
Q ss_pred CCCCCCCCCcccHHHHHHHhhcCCeE
Q 010447 345 FSAGGPGKGMYSRLYRRVLNEFPQVQ 370 (510)
Q Consensus 345 ~~~~~pg~~~~s~L~~~lRe~~~~~Y 370 (510)
|.-||||.|-.. .-.++-++++++.
T Consensus 12 fVlGGPGsgKgT-qC~kiv~ky~ftH 36 (195)
T KOG3079|consen 12 FVLGGPGSGKGT-QCEKIVEKYGFTH 36 (195)
T ss_pred EEEcCCCCCcch-HHHHHHHHcCcee
Confidence 566899988544 4578889888553
No 51
>cd04922 ACT_AKi-HSDH-ThrA_2 ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). This CD includes the second of two ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). The ACT domains are positioned between the N-terminal catalytic domain of AK and the C-terminal HSDH domain found in bacteria (Escherichia coli (EC) ThrA) and higher plants (Zea mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. HSDH is the first committed reaction in the branch of the pathway that leads to Thr and Met. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathwa
Probab=20.22 E-value=2.6e+02 Score=19.32 Aligned_cols=45 Identities=9% Similarity=-0.003 Sum_probs=32.0
Q ss_pred HHHHHHHHcCCeeeEee-cceeEEEEEeccCCChHHHHHHHHHhhh
Q 010447 139 RIVREVEAIGGNVQASA-SREQMGYSFDALKTYVPEMVELLIDCVR 183 (510)
Q Consensus 139 ~l~~~l~~~g~~~~~~~-~~~~~~~~~~~~~~~l~~~l~ll~~~~~ 183 (510)
++.+.+...|+++..-. +.....+++....++.+.+++.|++.+.
T Consensus 20 ~i~~~l~~~~I~v~~i~~~~s~~~is~~v~~~~~~~~~~~lh~~~~ 65 (66)
T cd04922 20 TFFSALAKANVNIRAIAQGSSERNISAVIDEDDATKALRAVHERFF 65 (66)
T ss_pred HHHHHHHHCCCCEEEEEecCcccEEEEEEeHHHHHHHHHHHHHHHh
Confidence 44555677777765443 2244788888888999999999988775
No 52
>PF09186 DUF1949: Domain of unknown function (DUF1949); InterPro: IPR015269 Members of this entry are a set of functionally uncharacterised hypothetical bacterial proteins. They adopt a ferredoxin-like fold, with a beta-alpha-beta-beta-alpha-beta arrangement []. This entry contains the protein Impact, which is a translational regulator that ensures constant high levels of translation under amino acid starvation. It acts by interacting with Gcn1/Gcn1L1, thereby preventing activation of Gcn2 protein kinases (EIF2AK1 to 4) and subsequent down-regulation of protein synthesis. It is evolutionary conserved from eukaryotes to archaea []. ; PDB: 2CVE_A 1VI7_A.
Probab=20.17 E-value=2.8e+02 Score=18.53 Aligned_cols=45 Identities=16% Similarity=0.142 Sum_probs=37.8
Q ss_pred HHHHHHHHHcCCeeeEeecceeEEEEEeccCCChHHHHHHHHHhh
Q 010447 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCV 182 (510)
Q Consensus 138 ~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~~ 182 (510)
..+.+.++..++.+.-....+...+.+..+.++.+.+.+.|.+..
T Consensus 9 ~~v~~~l~~~~~~i~~~~y~~~V~~~v~v~~~~~~~f~~~l~~~t 53 (56)
T PF09186_consen 9 GKVERLLEQNGIEIVDEDYTDDVTLTVAVPEEEVEEFKAQLTDLT 53 (56)
T ss_dssp HHHHHHHHHTTTEEEEEEECTTEEEEEEEECCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCEEEcceecceEEEEEEECHHHHHHHHHHHHHHc
Confidence 457788899999887777677799999999999999999888754
No 53
>PLN00222 tubulin gamma chain; Provisional
Probab=20.14 E-value=95 Score=32.26 Aligned_cols=24 Identities=33% Similarity=0.534 Sum_probs=20.9
Q ss_pred CCCCCCCCcccHHHHHHHhhcCCe
Q 010447 346 SAGGPGKGMYSRLYRRVLNEFPQV 369 (510)
Q Consensus 346 ~~~~pg~~~~s~L~~~lRe~~~~~ 369 (510)
-+||-|.|+.++|.+.||++++..
T Consensus 141 l~GGTGSGlgs~lle~L~d~y~~~ 164 (454)
T PLN00222 141 IAGGTGSGMGSYLLEALNDRYSKK 164 (454)
T ss_pred CCCCccchHHHHHHHHHHhhcCCc
Confidence 467899999999999999998743
No 54
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair]
Probab=20.09 E-value=9.4e+02 Score=24.58 Aligned_cols=118 Identities=8% Similarity=0.048 Sum_probs=64.4
Q ss_pred EEEEEEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCCHHHH--
Q 010447 385 FGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHF-- 462 (510)
Q Consensus 385 ~~i~~~~~p~~~~~~~~~~~~~l~~l~~~~~~t~~el~~ak~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-- 462 (510)
+++.+...|-..+..+..+.+.... .. -.++++-++-.-. .+..+..+.....+++.......+...+.+..
T Consensus 235 ~Gl~~~I~~Pd~e~r~aiL~kka~~-~~-~~i~~ev~~~la~----~~~~nvReLegaL~~l~~~a~~~~~~iTi~~v~e 308 (408)
T COG0593 235 WGLVVEIEPPDDETRLAILRKKAED-RG-IEIPDEVLEFLAK----RLDRNVRELEGALNRLDAFALFTKRAITIDLVKE 308 (408)
T ss_pred ceeEEeeCCCCHHHHHHHHHHHHHh-cC-CCCCHHHHHHHHH----HhhccHHHHHHHHHHHHHHHHhcCccCcHHHHHH
Confidence 4455554444445555555553333 22 2466665554433 34455555556666666555555555443222
Q ss_pred --HHHHhc---CCHHHHHHHHHHHhc-CCceEEEEcCCCCCCCHHHHHhHhh
Q 010447 463 --LKTVEG---VTAKDIASVAQKLLS-SPLTMASYGDVINVPSYDAVSSKFK 508 (510)
Q Consensus 463 --~~~i~~---vT~~di~~~a~~~l~-~~~~~~v~G~~~~~p~~~~i~~~~~ 508 (510)
.+.+.. +|+++|++...+|++ ..--+..-+-..++-.+.+|+-.+.
T Consensus 309 ~L~~~~~~~~~itie~I~~~Va~~y~v~~~dl~s~~R~~~i~~~RqiamyL~ 360 (408)
T COG0593 309 ILKDLLRAGEKITIEDIQKIVAEYYNVKVSDLLSKSRTRNIVRPRQIAMYLA 360 (408)
T ss_pred HHHHhhcccccCCHHHHHHHHHHHhCCCHHHhhccccccccchHHHHHHHHH
Confidence 111222 999999999999998 4444444444455666666665543
No 55
>PF14659 Phage_int_SAM_3: Phage integrase, N-terminal SAM-like domain; PDB: 2KD1_A 2KOB_A 2KHQ_A 3LYS_E 2KIW_A 2KKP_A.
Probab=20.07 E-value=86 Score=21.29 Aligned_cols=17 Identities=29% Similarity=0.620 Sum_probs=12.1
Q ss_pred HhcCCHHHHHHHHHHHh
Q 010447 466 VEGVTAKDIASVAQKLL 482 (510)
Q Consensus 466 i~~vT~~di~~~a~~~l 482 (510)
|.+||+.+|+++.++++
T Consensus 42 i~~It~~~i~~~~~~l~ 58 (58)
T PF14659_consen 42 IKDITPRDIQNFINELL 58 (58)
T ss_dssp GGG--HHHHHHHHHHH-
T ss_pred HHHCCHHHHHHHHHHcC
Confidence 78899999999988764
Done!