Query 010448
Match_columns 510
No_of_seqs 253 out of 3666
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 00:39:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010448.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010448hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02939 transferase, transfer 100.0 1.2E-60 2.6E-65 504.6 47.5 444 4-488 502-970 (977)
2 PRK14098 glycogen synthase; Pr 100.0 1.3E-59 2.7E-64 487.6 50.1 446 5-487 27-488 (489)
3 PRK14099 glycogen synthase; Pr 100.0 1.7E-59 3.6E-64 486.2 48.0 443 5-488 25-482 (485)
4 TIGR02095 glgA glycogen/starch 100.0 7.3E-57 1.6E-61 470.0 48.3 439 4-485 21-473 (473)
5 PRK00654 glgA glycogen synthas 100.0 1.2E-56 2.6E-61 466.4 48.8 433 4-487 21-465 (466)
6 PLN02316 synthase/transferase 100.0 4E-55 8.7E-60 471.3 46.2 407 4-486 608-1035(1036)
7 cd03791 GT1_Glycogen_synthase_ 100.0 9.2E-54 2E-58 448.0 48.6 443 4-483 20-475 (476)
8 COG0297 GlgA Glycogen synthase 100.0 2.7E-49 5.8E-54 399.3 41.4 443 5-488 22-481 (487)
9 TIGR03449 mycothiol_MshA UDP-N 100.0 2.5E-40 5.5E-45 339.5 36.6 370 3-487 23-404 (405)
10 TIGR02472 sucr_P_syn_N sucrose 100.0 5.7E-40 1.2E-44 339.2 36.2 386 3-483 29-439 (439)
11 PRK10307 putative glycosyl tra 100.0 5.2E-39 1.1E-43 330.3 36.4 378 3-488 18-411 (412)
12 TIGR02468 sucrsPsyn_pln sucros 100.0 4.6E-39 1E-43 346.2 36.1 427 4-488 199-674 (1050)
13 cd03796 GT1_PIG-A_like This fa 100.0 1.8E-38 3.8E-43 324.7 34.4 348 3-488 17-371 (398)
14 PLN02871 UDP-sulfoquinovose:DA 100.0 2.2E-38 4.8E-43 329.9 33.8 287 126-488 144-438 (465)
15 TIGR02470 sucr_synth sucrose s 100.0 2.2E-37 4.7E-42 327.4 35.8 319 126-482 385-745 (784)
16 PRK15484 lipopolysaccharide 1, 100.0 1.8E-37 3.9E-42 314.5 33.7 346 3-486 24-379 (380)
17 PRK15427 colanic acid biosynth 100.0 2.9E-37 6.2E-42 315.0 34.1 275 126-485 118-406 (406)
18 TIGR02149 glgA_Coryne glycogen 100.0 5.5E-37 1.2E-41 312.9 35.2 291 126-486 83-388 (388)
19 cd04962 GT1_like_5 This family 100.0 8.8E-37 1.9E-41 309.3 34.5 282 126-485 84-371 (371)
20 PLN00142 sucrose synthase 100.0 1.5E-36 3.1E-41 321.0 34.8 322 126-482 408-768 (815)
21 cd03818 GT1_ExpC_like This fam 100.0 3.4E-36 7.4E-41 307.7 35.5 227 210-479 151-395 (396)
22 TIGR02094 more_P_ylases alpha- 100.0 1.2E-35 2.6E-40 310.6 37.4 421 39-483 87-599 (601)
23 TIGR03088 stp2 sugar transfera 100.0 7.2E-36 1.6E-40 303.2 32.2 231 212-486 133-374 (374)
24 cd03800 GT1_Sucrose_synthase T 100.0 2E-35 4.2E-40 302.1 34.8 363 3-479 24-397 (398)
25 cd03819 GT1_WavL_like This fam 100.0 2.9E-34 6.4E-39 288.8 30.7 268 126-474 78-355 (355)
26 cd05844 GT1_like_7 Glycosyltra 100.0 3.5E-34 7.6E-39 289.8 30.9 272 126-480 82-366 (367)
27 cd03805 GT1_ALG2_like This fam 100.0 2.3E-34 5E-39 293.9 29.8 229 208-478 147-392 (392)
28 KOG1111 N-acetylglucosaminyltr 100.0 2.1E-35 4.5E-40 275.2 19.5 351 3-490 18-372 (426)
29 cd03792 GT1_Trehalose_phosphor 100.0 7.5E-34 1.6E-38 288.1 32.5 275 126-485 85-372 (372)
30 cd03816 GT1_ALG1_like This fam 100.0 2.7E-33 5.8E-38 287.2 34.0 282 126-475 95-407 (415)
31 cd03813 GT1_like_3 This family 100.0 4.7E-34 1E-38 297.7 26.5 286 126-483 173-475 (475)
32 cd03802 GT1_AviGT4_like This f 100.0 4.7E-33 1E-37 277.7 32.5 245 126-483 87-335 (335)
33 cd04955 GT1_like_6 This family 100.0 7.6E-33 1.6E-37 279.3 33.8 221 209-483 137-363 (363)
34 cd04951 GT1_WbdM_like This fam 100.0 2.7E-33 5.9E-38 282.1 30.5 275 126-483 79-359 (360)
35 PRK15179 Vi polysaccharide bio 100.0 4E-33 8.8E-38 295.7 33.0 283 126-483 400-692 (694)
36 PRK15490 Vi polysaccharide bio 100.0 3.5E-33 7.6E-38 283.0 30.0 278 126-484 280-575 (578)
37 PRK10125 putative glycosyl tra 100.0 4.2E-33 9.1E-38 283.4 30.2 217 211-485 186-405 (405)
38 PLN02846 digalactosyldiacylgly 100.0 1.9E-33 4.1E-38 284.5 26.5 210 215-484 180-391 (462)
39 PRK09922 UDP-D-galactose:(gluc 100.0 4.8E-33 1E-37 280.7 27.7 268 126-487 84-358 (359)
40 cd03799 GT1_amsK_like This is 100.0 3.7E-32 8E-37 273.3 32.1 263 126-477 79-354 (355)
41 cd03814 GT1_like_2 This family 100.0 3.2E-32 6.9E-37 274.0 31.0 226 207-483 136-364 (364)
42 cd03807 GT1_WbnK_like This fam 100.0 3.9E-32 8.4E-37 272.6 31.1 343 3-483 15-365 (365)
43 cd04299 GT1_Glycogen_Phosphory 100.0 3.2E-31 6.9E-36 281.5 37.9 422 39-487 174-693 (778)
44 cd03812 GT1_CapH_like This fam 100.0 4.6E-32 9.9E-37 273.2 29.9 262 126-467 80-345 (358)
45 cd03825 GT1_wcfI_like This fam 100.0 6.8E-32 1.5E-36 272.4 30.3 223 214-485 134-365 (365)
46 cd03794 GT1_wbuB_like This fam 100.0 2.3E-31 5E-36 269.4 33.7 365 3-478 17-393 (394)
47 cd03795 GT1_like_4 This family 100.0 2.3E-31 5E-36 267.7 32.4 267 126-475 83-357 (357)
48 cd03821 GT1_Bme6_like This fam 100.0 2.3E-31 5E-36 268.0 31.0 224 210-479 144-374 (375)
49 cd03823 GT1_ExpE7_like This fa 100.0 4.8E-31 1E-35 264.7 31.5 213 217-483 145-358 (359)
50 cd03817 GT1_UGDG_like This fam 100.0 1.6E-30 3.4E-35 262.0 33.6 282 126-484 84-373 (374)
51 cd03798 GT1_wlbH_like This fam 100.0 2.5E-30 5.4E-35 260.0 32.4 280 126-485 93-377 (377)
52 cd03793 GT1_Glycogen_synthase_ 100.0 1.5E-30 3.3E-35 263.9 30.6 324 126-487 148-589 (590)
53 cd03822 GT1_ecORF704_like This 100.0 1.5E-30 3.3E-35 262.1 30.8 279 126-483 76-366 (366)
54 cd03801 GT1_YqgM_like This fam 100.0 4.4E-30 9.4E-35 257.4 33.9 283 126-483 85-374 (374)
55 cd03806 GT1_ALG11_like This fa 100.0 1.4E-30 2.9E-35 267.0 30.1 218 208-476 182-418 (419)
56 cd03808 GT1_cap1E_like This fa 100.0 1.4E-30 3.1E-35 260.4 29.4 339 3-479 13-358 (359)
57 PLN02949 transferase, transfer 100.0 1.3E-29 2.8E-34 260.5 35.4 229 210-489 215-461 (463)
58 PHA01630 putative group 1 glyc 100.0 1.2E-30 2.7E-35 257.5 25.0 230 207-484 85-330 (331)
59 TIGR02918 accessory Sec system 100.0 1.9E-30 4.2E-35 269.1 26.7 217 213-485 268-500 (500)
60 cd03809 GT1_mtfB_like This fam 100.0 2.8E-30 6.1E-35 260.1 27.2 275 126-479 85-364 (365)
61 cd03820 GT1_amsD_like This fam 100.0 7.6E-30 1.6E-34 254.0 29.4 212 209-479 129-347 (348)
62 PLN02275 transferase, transfer 100.0 9.6E-30 2.1E-34 257.3 30.1 244 126-449 100-371 (371)
63 cd04946 GT1_AmsK_like This fam 100.0 1.3E-29 2.8E-34 259.4 28.0 219 208-479 176-406 (407)
64 TIGR03087 stp1 sugar transfera 100.0 2.4E-30 5.1E-35 264.7 20.9 221 208-483 165-395 (397)
65 PHA01633 putative glycosyl tra 100.0 1.6E-28 3.5E-33 239.5 29.8 225 207-480 84-335 (335)
66 PLN02501 digalactosyldiacylgly 100.0 1.1E-28 2.4E-33 252.7 27.2 208 216-483 499-708 (794)
67 cd03804 GT1_wbaZ_like This fam 100.0 2.4E-28 5.2E-33 245.8 25.3 205 208-478 146-350 (351)
68 cd03811 GT1_WabH_like This fam 100.0 8.6E-28 1.9E-32 239.4 28.2 253 126-462 81-341 (353)
69 cd03788 GT1_TPS Trehalose-6-Ph 100.0 8.9E-28 1.9E-32 248.2 22.6 311 96-481 111-458 (460)
70 cd04949 GT1_gtfA_like This fam 100.0 1.1E-27 2.3E-32 243.0 22.8 213 211-478 153-372 (372)
71 TIGR02400 trehalose_OtsA alpha 100.0 1.1E-26 2.3E-31 238.2 27.4 312 96-482 107-454 (456)
72 PRK00726 murG undecaprenyldiph 99.9 1E-24 2.2E-29 219.9 29.6 322 7-483 19-356 (357)
73 cd03785 GT1_MurG MurG is an N- 99.9 4.1E-24 8.8E-29 215.0 28.8 246 126-475 89-348 (350)
74 PF08323 Glyco_transf_5: Starc 99.9 7.9E-26 1.7E-30 213.9 14.2 204 4-232 20-232 (245)
75 PLN03063 alpha,alpha-trehalose 99.9 3.9E-24 8.4E-29 232.4 27.3 319 96-488 127-481 (797)
76 TIGR01133 murG undecaprenyldip 99.9 2.3E-23 4.9E-28 209.4 28.0 231 126-464 90-332 (348)
77 cd04950 GT1_like_1 Glycosyltra 99.9 7.1E-23 1.5E-27 207.4 27.2 222 207-484 145-371 (373)
78 PRK14501 putative bifunctional 99.9 1.7E-23 3.7E-28 228.0 21.2 317 96-488 113-466 (726)
79 PRK05749 3-deoxy-D-manno-octul 99.9 7E-23 1.5E-27 211.4 24.2 232 207-488 170-423 (425)
80 PRK13609 diacylglycerol glucos 99.9 2.7E-21 5.8E-26 196.7 30.0 221 213-485 145-372 (380)
81 PF00534 Glycos_transf_1: Glyc 99.9 3.9E-22 8.4E-27 179.4 18.2 164 286-465 2-170 (172)
82 TIGR02398 gluc_glyc_Psyn gluco 99.9 3E-21 6.5E-26 196.8 26.7 313 96-482 112-480 (487)
83 PLN02605 monogalactosyldiacylg 99.9 3.6E-21 7.8E-26 195.6 27.3 216 213-481 148-378 (382)
84 KOG0853 Glycosyltransferase [C 99.9 1.3E-20 2.8E-25 188.1 24.0 241 212-487 206-470 (495)
85 PRK13608 diacylglycerol glucos 99.9 2.2E-19 4.7E-24 182.8 27.1 223 213-487 145-374 (391)
86 TIGR00236 wecB UDP-N-acetylglu 99.8 1.7E-18 3.8E-23 175.0 25.4 252 126-464 86-345 (365)
87 PLN03064 alpha,alpha-trehalose 99.8 3.5E-18 7.5E-23 185.0 26.2 298 126-486 230-563 (934)
88 PRK09814 beta-1,6-galactofuran 99.8 2.6E-18 5.7E-23 171.1 23.2 184 207-464 115-309 (333)
89 cd01635 Glycosyltransferase_GT 99.8 3.7E-18 8.1E-23 159.8 22.4 118 306-423 109-229 (229)
90 cd03786 GT1_UDP-GlcNAc_2-Epime 99.8 2.1E-17 4.7E-22 167.0 23.1 216 212-481 138-361 (363)
91 PRK00025 lpxB lipid-A-disaccha 99.8 4.5E-17 9.8E-22 165.7 23.9 220 210-486 129-375 (380)
92 PF05693 Glycogen_syn: Glycoge 99.8 4.8E-17 1E-21 164.7 23.0 319 127-488 143-585 (633)
93 COG0438 RfaG Glycosyltransfera 99.8 9.3E-17 2E-21 159.4 25.1 223 215-487 150-379 (381)
94 KOG2941 Beta-1,4-mannosyltrans 99.7 2E-15 4.4E-20 141.1 24.2 300 126-478 103-435 (444)
95 KOG1387 Glycosyltransferase [C 99.7 9.1E-15 2E-19 136.7 23.1 223 214-488 221-462 (465)
96 PF13692 Glyco_trans_1_4: Glyc 99.6 6.5E-16 1.4E-20 132.9 9.4 129 302-451 3-135 (135)
97 PRK10117 trehalose-6-phosphate 99.6 3.9E-14 8.5E-19 143.3 22.6 316 96-486 103-455 (474)
98 PF00982 Glyco_transf_20: Glyc 99.6 9.1E-14 2E-18 142.5 20.6 296 126-482 140-472 (474)
99 TIGR03713 acc_sec_asp1 accesso 99.6 1.1E-13 2.3E-18 144.1 20.1 162 302-482 320-519 (519)
100 TIGR00215 lpxB lipid-A-disacch 99.5 2.5E-12 5.4E-17 130.5 26.0 193 209-452 132-348 (385)
101 COG0380 OtsA Trehalose-6-phosp 99.5 4.8E-12 1E-16 127.6 26.4 316 95-483 126-478 (486)
102 PLN02205 alpha,alpha-trehalose 99.5 2E-12 4.4E-17 141.3 24.2 297 129-486 203-553 (854)
103 PF13579 Glyco_trans_4_4: Glyc 99.4 5.2E-13 1.1E-17 117.7 9.5 157 3-255 4-160 (160)
104 PF13439 Glyco_transf_4: Glyco 99.3 2.2E-11 4.7E-16 109.2 10.6 162 3-261 15-176 (177)
105 PRK12446 undecaprenyldiphospho 99.3 7.3E-09 1.6E-13 103.7 28.9 249 125-482 90-349 (352)
106 TIGR02919 accessory Sec system 99.2 2.4E-10 5.3E-15 116.4 16.7 172 214-452 238-412 (438)
107 COG0058 GlgP Glucan phosphoryl 99.2 4E-10 8.8E-15 118.3 18.4 366 41-424 184-629 (750)
108 PF13524 Glyco_trans_1_2: Glyc 99.2 4.8E-11 1E-15 95.1 7.6 89 378-480 1-92 (92)
109 COG0707 MurG UDP-N-acetylgluco 99.2 4.9E-08 1.1E-12 96.9 28.2 162 300-485 182-354 (357)
110 PRK14986 glycogen phosphorylas 99.0 9.2E-09 2E-13 109.6 16.9 293 127-424 314-694 (815)
111 PRK14985 maltodextrin phosphor 98.9 8.5E-09 1.9E-13 109.4 12.1 295 126-424 302-680 (798)
112 PF00343 Phosphorylase: Carboh 98.9 3.1E-07 6.8E-12 96.8 23.5 291 130-424 217-595 (713)
113 TIGR03568 NeuC_NnaA UDP-N-acet 98.9 7.5E-07 1.6E-11 89.7 25.2 214 214-481 143-364 (365)
114 KOG3742 Glycogen synthase [Car 98.9 1.7E-09 3.6E-14 104.8 5.6 319 127-486 174-614 (692)
115 cd04300 GT1_Glycogen_Phosphory 98.9 5.1E-08 1.1E-12 104.2 17.3 294 126-424 300-681 (797)
116 TIGR02093 P_ylase glycogen/sta 98.9 2.4E-08 5.2E-13 106.2 14.2 291 126-424 297-678 (794)
117 PF09314 DUF1972: Domain of un 98.8 2.4E-07 5.3E-12 82.4 14.7 160 3-257 20-185 (185)
118 PF02350 Epimerase_2: UDP-N-ac 98.6 6.4E-06 1.4E-10 82.2 22.2 287 96-482 49-345 (346)
119 PF13477 Glyco_trans_4_2: Glyc 98.6 5.3E-07 1.2E-11 77.6 12.0 129 3-223 10-139 (139)
120 TIGR03492 conserved hypothetic 98.6 2.2E-05 4.7E-10 80.0 25.3 190 212-461 157-372 (396)
121 TIGR03590 PseG pseudaminic aci 98.5 4.1E-05 9E-10 74.1 21.6 96 302-407 172-268 (279)
122 COG1519 KdtA 3-deoxy-D-manno-o 98.4 2.7E-05 5.8E-10 76.9 18.9 209 206-464 168-397 (419)
123 cd03784 GT1_Gtf_like This fami 98.4 7.5E-05 1.6E-09 76.5 22.7 124 300-451 239-372 (401)
124 PF04007 DUF354: Protein of un 98.4 7.6E-05 1.6E-09 73.5 20.8 173 213-450 123-309 (335)
125 PF13528 Glyco_trans_1_3: Glyc 98.3 4.8E-05 1E-09 75.3 18.6 119 300-448 192-317 (318)
126 PF13844 Glyco_transf_41: Glyc 98.3 4.7E-05 1E-09 77.5 17.4 176 290-485 276-467 (468)
127 COG0763 LpxB Lipid A disacchar 98.2 2.7E-05 5.9E-10 76.0 14.4 155 210-406 131-290 (381)
128 PF02684 LpxB: Lipid-A-disacch 98.2 0.00024 5.3E-09 70.9 20.8 197 209-452 127-341 (373)
129 PRK02797 4-alpha-L-fucosyltran 98.1 0.0017 3.6E-08 62.0 23.2 167 301-488 146-320 (322)
130 COG0381 WecB UDP-N-acetylgluco 98.1 0.0048 1E-07 60.8 27.0 272 126-486 92-372 (383)
131 PHA03392 egt ecdysteroid UDP-g 98.0 0.0016 3.5E-08 68.4 23.9 126 301-452 297-433 (507)
132 COG3914 Spy Predicted O-linked 97.9 0.00027 5.8E-09 72.0 15.4 180 290-488 421-617 (620)
133 PRK01021 lpxB lipid-A-disaccha 97.8 0.00091 2E-08 70.0 17.0 154 209-406 355-514 (608)
134 PF12000 Glyco_trans_4_3: Gkyc 97.7 0.00051 1.1E-08 60.5 12.0 41 210-261 130-170 (171)
135 PF07429 Glyco_transf_56: 4-al 97.7 0.0052 1.1E-07 59.5 19.5 165 301-485 185-356 (360)
136 COG1817 Uncharacterized protei 97.5 0.0078 1.7E-07 57.1 17.0 180 212-451 123-314 (346)
137 COG4641 Uncharacterized protei 97.5 0.012 2.6E-07 57.5 18.8 211 215-487 138-364 (373)
138 TIGR01426 MGT glycosyltransfer 97.5 0.0015 3.3E-08 66.7 13.0 158 301-481 226-389 (392)
139 KOG1050 Trehalose-6-phosphate 97.4 0.02 4.2E-07 62.1 20.1 263 127-452 141-441 (732)
140 PF04464 Glyphos_transf: CDP-G 96.9 0.0089 1.9E-07 60.5 12.0 199 209-451 128-336 (369)
141 COG1819 Glycosyl transferases, 96.7 0.025 5.4E-07 57.8 13.0 126 301-451 238-368 (406)
142 PF00862 Sucrose_synth: Sucros 96.6 0.0021 4.6E-08 64.9 4.3 81 126-228 401-481 (550)
143 COG3660 Predicted nucleoside-d 96.5 0.15 3.3E-06 47.3 15.2 105 300-409 161-275 (329)
144 PRK14089 ipid-A-disaccharide s 96.4 0.12 2.7E-06 51.4 15.3 91 302-406 169-261 (347)
145 PRK10017 colanic acid biosynth 96.3 0.91 2E-05 46.7 21.5 131 317-464 260-403 (426)
146 PF06258 Mito_fiss_Elm1: Mitoc 96.1 0.23 4.9E-06 48.8 15.5 105 301-409 147-259 (311)
147 PF08288 PIGA: PIGA (GPI ancho 96.0 0.048 1E-06 41.6 7.6 36 126-167 50-85 (90)
148 TIGR00661 MJ1255 conserved hyp 95.7 0.11 2.3E-06 51.5 11.2 120 301-451 189-314 (321)
149 PF04101 Glyco_tran_28_C: Glyc 95.1 0.00077 1.7E-08 59.9 -5.8 81 357-451 56-144 (167)
150 PLN02448 UDP-glycosyltransfera 94.7 0.72 1.6E-05 48.1 14.1 137 301-452 275-416 (459)
151 PF06925 MGDG_synth: Monogalac 94.5 0.19 4.1E-06 44.6 8.2 25 214-241 136-160 (169)
152 PLN02670 transferase, transfer 94.5 0.73 1.6E-05 48.0 13.6 119 358-485 341-466 (472)
153 TIGR02195 heptsyl_trn_II lipop 94.4 0.82 1.8E-05 45.5 13.4 116 287-410 162-281 (334)
154 PF10087 DUF2325: Uncharacteri 94.1 0.14 3E-06 40.8 5.8 79 333-412 2-88 (97)
155 PLN02562 UDP-glycosyltransfera 93.9 0.88 1.9E-05 47.2 12.7 130 301-451 274-413 (448)
156 PRK10422 lipopolysaccharide co 92.6 2.7 5.8E-05 42.1 13.7 106 300-410 183-292 (352)
157 PF01075 Glyco_transf_9: Glyco 92.3 1.3 2.9E-05 41.7 10.6 104 300-408 105-211 (247)
158 TIGR02201 heptsyl_trn_III lipo 92.3 3.1 6.7E-05 41.5 13.7 104 301-409 182-289 (344)
159 PLN02410 UDP-glucoronosyl/UDP- 92.2 2.6 5.6E-05 43.8 13.3 135 300-452 264-411 (451)
160 PLN03004 UDP-glycosyltransfera 92.2 1.6 3.4E-05 45.3 11.6 85 357-451 335-424 (451)
161 cd03789 GT1_LPS_heptosyltransf 92.2 1.4 3E-05 42.5 10.7 104 302-412 123-230 (279)
162 PF00201 UDPGT: UDP-glucoronos 92.0 0.41 8.8E-06 50.6 7.3 127 300-451 276-409 (500)
163 TIGR02193 heptsyl_trn_I lipopo 92.0 6.6 0.00014 38.6 15.6 103 300-409 179-283 (319)
164 PF11997 DUF3492: Domain of un 91.9 0.21 4.5E-06 47.9 4.5 87 126-230 172-260 (268)
165 PLN02210 UDP-glucosyl transfer 91.3 3.4 7.4E-05 43.0 12.9 139 301-451 270-415 (456)
166 PLN00164 glucosyltransferase; 91.0 4.9 0.00011 42.2 13.8 86 358-451 341-431 (480)
167 PLN02208 glycosyltransferase f 90.8 6.2 0.00014 40.9 14.2 140 300-452 251-402 (442)
168 PLN02173 UDP-glucosyl transfer 90.3 2.3 4.9E-05 44.1 10.5 139 300-451 264-408 (449)
169 PLN02863 UDP-glucoronosyl/UDP- 89.8 5.4 0.00012 41.8 12.9 137 301-450 284-432 (477)
170 COG0859 RfaF ADP-heptose:LPS h 89.8 3.6 7.9E-05 40.9 11.2 102 301-409 176-280 (334)
171 PLN02167 UDP-glycosyltransfera 89.7 5.6 0.00012 41.7 13.1 139 301-451 281-434 (475)
172 PLN03007 UDP-glucosyltransfera 89.4 6.9 0.00015 41.1 13.4 144 300-452 285-441 (482)
173 PRK10916 ADP-heptose:LPS hepto 89.3 6.8 0.00015 39.1 12.9 112 289-408 170-289 (348)
174 PLN02152 indole-3-acetate beta 88.9 8 0.00017 40.2 13.2 138 301-451 262-417 (455)
175 PLN02764 glycosyltransferase f 88.1 12 0.00026 38.8 13.9 139 300-451 257-407 (453)
176 PLN02555 limonoid glucosyltran 88.0 14 0.0003 38.8 14.4 140 301-451 278-429 (480)
177 PRK10964 ADP-heptose:LPS hepto 87.7 18 0.0004 35.5 14.7 104 301-411 179-284 (322)
178 KOG4626 O-linked N-acetylgluco 87.7 2.8 6.2E-05 44.0 8.7 185 290-493 750-949 (966)
179 COG3980 spsG Spore coat polysa 87.6 4 8.7E-05 38.8 9.0 90 303-404 161-251 (318)
180 TIGR03609 S_layer_CsaB polysac 87.6 21 0.00044 34.7 14.8 87 315-406 189-276 (298)
181 PF11440 AGT: DNA alpha-glucos 86.7 16 0.00034 34.8 12.2 138 305-451 187-353 (355)
182 PLN00414 glycosyltransferase f 85.9 28 0.00061 36.2 15.2 140 300-452 252-403 (446)
183 PLN02207 UDP-glycosyltransfera 85.5 20 0.00043 37.5 13.9 140 301-450 276-425 (468)
184 PLN02554 UDP-glycosyltransfera 85.3 19 0.0004 37.9 13.8 89 357-450 343-439 (481)
185 COG4671 Predicted glycosyl tra 84.4 45 0.00097 33.0 19.0 140 300-452 219-366 (400)
186 PLN02992 coniferyl-alcohol glu 83.9 21 0.00046 37.4 13.3 84 358-452 340-428 (481)
187 PF05159 Capsule_synth: Capsul 81.6 6.2 0.00013 37.8 7.9 100 300-408 116-227 (269)
188 PF01113 DapB_N: Dihydrodipico 80.2 3 6.5E-05 34.8 4.5 45 367-411 59-103 (124)
189 PF04413 Glycos_transf_N: 3-De 80.0 9.3 0.0002 34.4 7.9 39 207-254 141-179 (186)
190 PF03033 Glyco_transf_28: Glyc 79.0 1.5 3.3E-05 37.0 2.4 19 8-26 17-35 (139)
191 KOG2099 Glycogen phosphorylase 79.0 5.9 0.00013 41.1 6.8 137 288-424 550-714 (843)
192 PF15024 Glyco_transf_18: Glyc 75.4 24 0.00053 37.1 10.2 152 312-484 289-455 (559)
193 KOG1021 Acetylglucosaminyltran 71.2 29 0.00062 36.3 9.9 57 367-423 335-394 (464)
194 KOG0780 Signal recognition par 69.0 1.3E+02 0.0029 30.3 15.0 165 303-483 156-341 (483)
195 PF03808 Glyco_tran_WecB: Glyc 66.5 54 0.0012 29.0 9.4 104 312-415 30-141 (172)
196 PLN02534 UDP-glycosyltransfera 65.7 1.8E+02 0.004 30.6 15.3 89 357-450 345-443 (491)
197 PF12996 DUF3880: DUF based on 65.5 11 0.00025 28.4 4.2 44 211-265 14-57 (79)
198 PF00201 UDPGT: UDP-glucoronos 64.6 2.7 5.9E-05 44.3 0.8 24 4-27 14-37 (500)
199 cd06533 Glyco_transf_WecG_TagA 64.0 99 0.0021 27.3 10.5 102 311-415 27-139 (171)
200 PLN03015 UDP-glucosyl transfer 63.0 1.2E+02 0.0027 31.7 12.4 84 358-450 337-425 (470)
201 PF03016 Exostosin: Exostosin 59.7 29 0.00063 33.6 7.0 69 368-446 229-300 (302)
202 PF01975 SurE: Survival protei 58.1 9.8 0.00021 34.5 3.1 26 3-28 13-38 (196)
203 PF02951 GSH-S_N: Prokaryotic 57.7 33 0.00071 28.3 5.8 62 5-66 19-84 (119)
204 PF09949 DUF2183: Uncharacteri 57.0 27 0.00058 27.8 5.0 32 329-360 63-94 (100)
205 COG2327 WcaK Polysaccharide py 56.8 2.2E+02 0.0047 28.9 12.3 107 330-451 238-350 (385)
206 cd03146 GAT1_Peptidase_E Type 56.8 1.3E+02 0.0028 27.6 10.3 106 304-409 3-124 (212)
207 PRK10360 DNA-binding transcrip 56.4 1.1E+02 0.0024 26.8 9.9 67 375-451 47-118 (196)
208 KOG1192 UDP-glucuronosyl and U 54.9 1.7E+02 0.0036 30.6 12.3 131 301-451 278-422 (496)
209 PF04230 PS_pyruv_trans: Polys 53.5 1.7E+02 0.0036 27.2 11.2 90 313-407 189-284 (286)
210 PRK13398 3-deoxy-7-phosphohept 53.0 2.1E+02 0.0046 27.3 11.6 102 303-407 28-142 (266)
211 TIGR00696 wecB_tagA_cpsF bacte 50.1 86 0.0019 27.9 7.7 98 315-415 33-140 (177)
212 PRK00048 dihydrodipicolinate r 49.8 50 0.0011 31.4 6.6 42 369-410 54-95 (257)
213 TIGR01426 MGT glycosyltransfer 49.0 13 0.00028 37.8 2.6 20 7-26 13-32 (392)
214 COG4394 Uncharacterized protei 49.0 55 0.0012 31.3 6.4 111 286-406 164-283 (370)
215 cd00027 BRCT Breast Cancer Sup 48.5 73 0.0016 22.2 6.1 64 331-406 2-65 (72)
216 PRK03692 putative UDP-N-acetyl 48.2 2.3E+02 0.0051 26.7 10.6 98 315-415 90-197 (243)
217 PRK13396 3-deoxy-7-phosphohept 47.3 2.5E+02 0.0055 28.1 11.1 103 302-407 101-216 (352)
218 PF11071 DUF2872: Protein of u 46.9 53 0.0011 27.4 5.2 68 371-449 68-140 (141)
219 TIGR00670 asp_carb_tr aspartat 46.3 2.9E+02 0.0063 26.9 13.1 135 210-385 90-226 (301)
220 TIGR00661 MJ1255 conserved hyp 46.1 64 0.0014 31.6 7.0 19 7-26 18-36 (321)
221 TIGR03646 YtoQ_fam YtoQ family 44.1 65 0.0014 26.9 5.3 68 371-449 71-143 (144)
222 cd01425 RPS2 Ribosomal protein 43.0 1.1E+02 0.0024 27.6 7.5 32 374-406 126-157 (193)
223 PRK03094 hypothetical protein; 41.3 22 0.00047 27.0 2.1 22 3-24 7-28 (80)
224 PF08660 Alg14: Oligosaccharid 41.3 1.4E+02 0.003 26.4 7.6 70 126-231 92-162 (170)
225 PF02826 2-Hacid_dh_C: D-isome 40.3 1.6E+02 0.0035 26.0 8.1 78 330-409 36-130 (178)
226 PF10649 DUF2478: Protein of u 39.9 53 0.0012 28.6 4.6 37 371-407 89-131 (159)
227 PRK10840 transcriptional regul 39.7 2.9E+02 0.0062 24.9 11.5 110 330-451 3-126 (216)
228 TIGR00288 conserved hypothetic 38.8 1.1E+02 0.0023 26.8 6.2 65 315-383 90-156 (160)
229 cd01080 NAD_bind_m-THF_DH_Cycl 38.4 2E+02 0.0044 25.3 8.1 54 329-385 43-97 (168)
230 COG1830 FbaB DhnA-type fructos 37.9 1.6E+02 0.0035 27.9 7.7 123 303-451 116-259 (265)
231 TIGR03837 efp_adjacent_2 conse 37.6 2.5E+02 0.0054 28.2 9.2 112 286-405 167-286 (371)
232 TIGR00730 conserved hypothetic 37.5 3E+02 0.0064 24.5 11.4 40 371-412 92-139 (178)
233 PF06506 PrpR_N: Propionate ca 37.4 1.3E+02 0.0027 26.7 6.8 77 317-401 64-145 (176)
234 PF03698 UPF0180: Uncharacteri 36.7 28 0.00061 26.4 2.1 21 4-24 8-28 (80)
235 COG1887 TagB Putative glycosyl 36.5 4.7E+02 0.01 26.6 16.9 144 293-451 200-353 (388)
236 PF00070 Pyr_redox: Pyridine n 35.0 42 0.0009 25.1 2.9 23 4-26 9-31 (80)
237 PRK08410 2-hydroxyacid dehydro 35.0 1.4E+02 0.003 29.4 7.2 79 330-410 145-236 (311)
238 COG0111 SerA Phosphoglycerate 34.7 1.3E+02 0.0028 29.7 7.0 77 331-409 143-236 (324)
239 PRK06718 precorrin-2 dehydroge 34.4 3.6E+02 0.0077 24.5 11.7 86 322-415 25-110 (202)
240 PF12683 DUF3798: Protein of u 34.4 2.4E+02 0.0051 27.0 8.1 112 287-405 23-136 (275)
241 PF04392 ABC_sub_bind: ABC tra 34.3 1.9E+02 0.0041 27.9 8.2 92 314-406 115-218 (294)
242 PF10093 DUF2331: Uncharacteri 34.0 2.9E+02 0.0063 27.9 9.2 112 285-405 167-288 (374)
243 PRK06932 glycerate dehydrogena 32.8 1.5E+02 0.0032 29.2 7.1 79 330-410 147-237 (314)
244 COG2984 ABC-type uncharacteriz 32.0 2.3E+02 0.0049 27.8 7.8 93 316-409 145-249 (322)
245 PF00185 OTCace: Aspartate/orn 31.9 2.2E+02 0.0048 24.7 7.3 75 302-385 3-83 (158)
246 KOG1192 UDP-glucuronosyl and U 31.2 39 0.00085 35.4 3.0 24 5-28 21-44 (496)
247 cd05565 PTS_IIB_lactose PTS_II 30.6 2.5E+02 0.0054 22.3 6.7 72 333-406 4-79 (99)
248 PRK06732 phosphopantothenate-- 30.6 42 0.00091 31.3 2.7 19 7-25 30-48 (229)
249 TIGR01470 cysG_Nterm siroheme 30.5 4.2E+02 0.0091 24.1 12.4 85 322-415 24-110 (205)
250 PRK05583 ribosomal protein L7A 30.1 2.9E+02 0.0063 22.1 7.9 77 315-396 21-98 (104)
251 PRK13397 3-deoxy-7-phosphohept 30.0 4.8E+02 0.01 24.7 10.3 93 313-407 25-130 (250)
252 COG0214 SNZ1 Pyridoxine biosyn 29.8 2.1E+02 0.0046 26.6 6.8 72 387-463 194-272 (296)
253 PF00072 Response_reg: Respons 29.7 2.7E+02 0.0057 21.6 8.6 94 342-446 9-112 (112)
254 PF05014 Nuc_deoxyrib_tr: Nucl 29.6 65 0.0014 26.0 3.4 39 371-409 57-99 (113)
255 PF00533 BRCT: BRCA1 C Terminu 29.5 67 0.0015 23.4 3.3 66 329-406 7-72 (78)
256 PF01408 GFO_IDH_MocA: Oxidore 27.5 2.2E+02 0.0047 22.8 6.3 68 329-406 24-93 (120)
257 PRK06487 glycerate dehydrogena 27.4 1.7E+02 0.0038 28.7 6.5 80 330-411 148-238 (317)
258 TIGR00036 dapB dihydrodipicoli 27.3 1.9E+02 0.0041 27.6 6.6 37 373-409 66-102 (266)
259 cd01020 TroA_b Metal binding p 27.2 2.1E+02 0.0046 27.2 7.0 75 367-454 45-120 (264)
260 TIGR00658 orni_carb_tr ornithi 27.1 5.3E+02 0.012 25.2 9.8 85 286-383 136-224 (304)
261 PF00389 2-Hacid_dh: D-isomer 26.6 3.7E+02 0.008 22.2 9.0 80 357-445 20-101 (133)
262 PRK08366 vorA 2-ketoisovalerat 26.5 3E+02 0.0066 28.0 8.2 69 330-398 259-336 (390)
263 TIGR02853 spore_dpaA dipicolin 26.0 4.3E+02 0.0093 25.5 8.9 19 7-25 14-32 (287)
264 COG1692 Calcineurin-like phosp 25.9 3.7E+02 0.008 25.4 7.7 102 303-407 2-115 (266)
265 KOG0368 Acetyl-CoA carboxylase 25.9 1.4E+02 0.0031 35.4 6.0 92 313-423 123-214 (2196)
266 PF04127 DFP: DNA / pantothena 25.9 66 0.0014 28.9 3.0 20 7-26 33-52 (185)
267 PRK15424 propionate catabolism 25.6 3.6E+02 0.0078 28.8 8.8 101 318-451 95-195 (538)
268 PRK02255 putrescine carbamoylt 25.0 6E+02 0.013 25.3 9.8 88 287-384 140-231 (338)
269 PRK06719 precorrin-2 dehydroge 25.0 4.5E+02 0.0098 22.7 12.0 41 372-412 67-107 (157)
270 PRK05562 precorrin-2 dehydroge 24.6 5.7E+02 0.012 23.7 14.4 117 323-451 41-162 (223)
271 cd02071 MM_CoA_mut_B12_BD meth 24.5 3.9E+02 0.0085 21.8 7.9 39 303-341 53-92 (122)
272 KOG3349 Predicted glycosyltran 24.4 2.6E+02 0.0056 24.2 5.9 95 302-406 5-107 (170)
273 PRK02102 ornithine carbamoyltr 24.4 6.2E+02 0.014 25.1 9.7 131 210-383 96-232 (331)
274 COG3613 Nucleoside 2-deoxyribo 24.1 2.8E+02 0.006 24.5 6.3 37 371-407 64-106 (172)
275 smart00292 BRCT breast cancer 23.9 2.7E+02 0.0058 19.7 6.7 67 330-406 5-71 (80)
276 PRK05299 rpsB 30S ribosomal pr 23.8 4.3E+02 0.0093 25.2 8.2 38 375-413 157-195 (258)
277 COG1052 LdhA Lactate dehydroge 23.8 2.8E+02 0.0061 27.4 7.2 43 369-411 194-241 (324)
278 COG1570 XseA Exonuclease VII, 23.7 1.3E+02 0.0028 30.9 4.8 67 301-382 163-230 (440)
279 COG4109 Predicted transcriptio 23.6 3E+02 0.0065 27.4 7.0 101 330-447 114-218 (432)
280 PRK05395 3-dehydroquinate dehy 23.6 3.1E+02 0.0068 23.5 6.4 64 342-406 30-100 (146)
281 cd03129 GAT1_Peptidase_E_like 23.4 5.6E+02 0.012 23.2 11.7 98 313-410 12-125 (210)
282 TIGR01361 DAHP_synth_Bsub phos 23.4 5.5E+02 0.012 24.4 8.9 99 305-407 28-140 (260)
283 TIGR00853 pts-lac PTS system, 23.1 3.2E+02 0.007 21.4 6.1 74 333-408 7-84 (95)
284 COG1819 Glycosyl transferases, 23.0 63 0.0014 33.1 2.6 20 7-26 19-38 (406)
285 PRK15409 bifunctional glyoxyla 23.0 2.8E+02 0.006 27.4 7.0 42 369-410 194-240 (323)
286 cd01078 NAD_bind_H4MPT_DH NADP 22.8 5.4E+02 0.012 22.8 9.3 57 329-385 51-107 (194)
287 PF11238 DUF3039: Protein of u 22.7 61 0.0013 22.8 1.6 17 390-406 15-31 (58)
288 PRK09140 2-dehydro-3-deoxy-6-p 22.4 6E+02 0.013 23.2 10.1 106 303-424 63-179 (206)
289 PRK11891 aspartate carbamoyltr 22.3 8.8E+02 0.019 25.1 13.4 138 210-384 177-317 (429)
290 COG2102 Predicted ATPases of P 21.2 6.7E+02 0.014 23.2 9.7 92 289-389 54-149 (223)
291 PRK00124 hypothetical protein; 21.1 3E+02 0.0066 23.8 5.9 83 333-416 3-85 (151)
292 PRK08673 3-deoxy-7-phosphohept 20.9 8.3E+02 0.018 24.3 10.0 101 303-407 94-208 (335)
293 PF14359 DUF4406: Domain of un 20.9 1.5E+02 0.0032 23.2 3.7 33 371-403 55-90 (92)
294 PRK13243 glyoxylate reductase; 20.4 3.5E+02 0.0076 26.8 7.2 42 369-410 198-244 (333)
295 cd01452 VWA_26S_proteasome_sub 20.1 4.8E+02 0.01 23.4 7.3 51 302-353 109-160 (187)
296 COG4850 Uncharacterized conser 20.1 1.9E+02 0.004 28.5 4.8 46 312-360 262-307 (373)
No 1
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.2e-60 Score=504.62 Aligned_cols=444 Identities=32% Similarity=0.536 Sum_probs=360.7
Q ss_pred hhhhhHHHHHHHCCCcEEEEeeCCCCcccc-cCC----cEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCcc---ccccc
Q 010448 4 ASSTKLDSFIQANGHRVMTIAPRYDQYKDA-WDT----DVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPW---FLAKV 75 (510)
Q Consensus 4 ~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~---~~~~~ 75 (510)
-.++.|+++|+++||+|.||+|.|+..... ... .....+...+.....++++...+||++|+++.+. |+.
T Consensus 502 DVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~~fF~-- 579 (977)
T PLN02939 502 DVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPSKFFW-- 579 (977)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCchhccC--
Confidence 368899999999999999999999876522 111 1122222333344567888889999999998432 443
Q ss_pred cCCCCCcccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCC
Q 010448 76 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMY 155 (510)
Q Consensus 76 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~ 155 (510)
+..+|+ +.|+..||++|++++++++...++ +|| |||||||++++++.+++..+...+ +
T Consensus 580 ----R~~iYg------~~Dn~~RF~~FsrAaLe~~~~~~~----------~PD-IIH~HDW~TaLV~pll~~~y~~~~-~ 637 (977)
T PLN02939 580 ----RAQYYG------EHDDFKRFSYFSRAALELLYQSGK----------KPD-IIHCHDWQTAFVAPLYWDLYAPKG-F 637 (977)
T ss_pred ----CCCCCC------CccHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEECCccHHHHHHHHHHHHhhcc-C
Confidence 356786 689999999999999999987754 599 999999999998555554343222 3
Q ss_pred CCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCC
Q 010448 156 KSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED 235 (510)
Q Consensus 156 ~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~ 235 (510)
.++|+|+||||+.++|.++...+..++++...+... ++.... +...+++++.++..||.|+|||+.+++++.. .
T Consensus 638 ~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~---d~le~~-~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e 711 (977)
T PLN02939 638 NSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRP---DRMQDN-AHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--E 711 (977)
T ss_pred CCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccCh---hhhhhc-cCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--H
Confidence 678999999999999999877777777776543211 111101 2356899999999999999999999999885 2
Q ss_pred CCCchhhhh--hcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCC-CCCcEEEEecCccc
Q 010448 236 KGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD-RNIPVIGFIGRLEE 312 (510)
Q Consensus 236 ~g~~~~~~~--~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~i~~~Grl~~ 312 (510)
+|...+..+ ...++.+|+||||++.|.|..+.++..+|+.+++ ++|..++..+++++|++.+ ++.++|+|+||+.+
T Consensus 712 ~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl-~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~ 790 (977)
T PLN02939 712 GGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDL-QGKAANKAALRKQLGLSSADASQPLVGCITRLVP 790 (977)
T ss_pred hccchHHHhccccCCceEEecceehhhcCCccccccccccChhhh-hhhhhhhHHHHHHhCCCcccccceEEEEeecCCc
Confidence 444443333 2468999999999999999998889999999886 5888889999999999853 45689999999999
Q ss_pred ccChhhHHHHHHhhhhCCcEEEEEecCC-hhHHHHHHHHHHHCC--CceEEeccCCHHHHHHHHHhCcEEEeCCCCCCcc
Q 010448 313 QKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCG 389 (510)
Q Consensus 313 ~Kg~~~li~a~~~l~~~~~~l~i~G~g~-~~~~~~~~~l~~~~~--~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g 389 (510)
.||++.+++|+..+.+++++|+|+|+|+ ..+++.+++++.+++ ++|.+.+.+++...+.+|++||++++||++||||
T Consensus 791 QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfG 870 (977)
T PLN02939 791 QKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCG 870 (977)
T ss_pred ccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCc
Confidence 9999999999998877789999999996 456778888888764 3688989999888888999999999999999999
Q ss_pred HHHHHHHHhCCCcEEecCCCccceEEc---------CCceeEeccccccCCCCCccCHHHHHHHHHHHHHhh--CHHHHH
Q 010448 390 LIQLHAMRYGTVPIVASTGGLVDTVEE---------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALA 458 (510)
Q Consensus 390 ~~~~Eama~G~Pvv~s~~gg~~e~v~~---------~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~--~~~~~~ 458 (510)
++++|||+||+|+|++++||+.|+|.+ +.||++| ++.|+++|+++|.++++.. +++.+.
T Consensus 871 LvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf----------~~~D~eaLa~AL~rAL~~~~~dpe~~~ 940 (977)
T PLN02939 871 LTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF----------LTPDEQGLNSALERAFNYYKRKPEVWK 940 (977)
T ss_pred HHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe----------cCCCHHHHHHHHHHHHHHhccCHHHHH
Confidence 999999999999999999999999976 5799998 8999999999999988732 367888
Q ss_pred HHHHHHhhccCChHHHHHHHHHHHHHHHHc
Q 010448 459 EMMKNGMAQDLSWKGPAKKWEETLLNLEVA 488 (510)
Q Consensus 459 ~~~~~~~~~~fs~~~~~~~~~~~y~~l~~~ 488 (510)
+++++++.+.|||+.++++|.++|+.+++.
T Consensus 941 ~L~~~am~~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 941 QLVQKDMNIDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 888888888999999999999999999865
No 2
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=1.3e-59 Score=487.64 Aligned_cols=446 Identities=28% Similarity=0.542 Sum_probs=359.9
Q ss_pred hhhhHHHHHHHCCCcEEEEeeCCCCcccc---cCCc---EEEEEEeCCeEEEEEEEEEeeC--CceEEEEeCcccccccc
Q 010448 5 SSTKLDSFIQANGHRVMTIAPRYDQYKDA---WDTD---VVIELKVGDKIEKVRFFHCHKR--GVDRVFVDHPWFLAKVW 76 (510)
Q Consensus 5 ~~~~la~~l~~~Gh~V~vi~p~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~--gv~v~~~~~p~~~~~~~ 76 (510)
.++.|+++|+++||+|.|++|.|+.+... .... ..+.+.+..............+ ||++|++++|.|+.+
T Consensus 27 v~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r-- 104 (489)
T PRK14098 27 FMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKR-- 104 (489)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCC--
Confidence 57899999999999999999999987643 1111 1122233322222222222233 799999999998864
Q ss_pred CCCCCcccCCC-CCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCC
Q 010448 77 GKTQSKIYGPR-TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMY 155 (510)
Q Consensus 77 ~~~~~~~y~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~ 155 (510)
..+|+.. .|.+|.|+..||++|+++++++++..+. +|| |||+|+|+++++|.+++..+.....+
T Consensus 105 ----~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~----------~pD-iiH~hdw~t~l~~~~l~~~~~~~~~~ 169 (489)
T PRK14098 105 ----NGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGW----------KPD-IIHCHDWYAGLVPLLLKTVYADHEFF 169 (489)
T ss_pred ----CCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEecCcHHHHHHHHHHHHhhhcccc
Confidence 6789875 6778999999999999999999887653 599 99999999999999998765433334
Q ss_pred CCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCC
Q 010448 156 KSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED 235 (510)
Q Consensus 156 ~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~ 235 (510)
.++|+|+|+||+.++|.++...+..+ ++...... . ..+...+++++.++..||.|+|+|+.+++++.+...
T Consensus 170 ~~~~~V~TiHn~~~qg~~~~~~~~~~-~~~~~~~~------~--~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~ 240 (489)
T PRK14098 170 KDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSG------L--HREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGE 240 (489)
T ss_pred CCCCEEEEcCCCcccCCCCHHHHHHh-CCHHhhhh------h--hhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCC
Confidence 68999999999999988765443332 33222111 0 011245789999999999999999999999975212
Q ss_pred CCCchhhhhh--cCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccc
Q 010448 236 KGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQ 313 (510)
Q Consensus 236 ~g~~~~~~~~--~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~ 313 (510)
+|...+.++. ..++.+|+||||++.|.|..+..+..+|+.+++ +.|..++..+++++|++.+++.++|+++||+.+.
T Consensus 241 ~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~-~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~ 319 (489)
T PRK14098 241 EAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERL-DGKLENKKALLEEVGLPFDEETPLVGVIINFDDF 319 (489)
T ss_pred CCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchh-hhHHHHHHHHHHHhCCCCccCCCEEEEecccccc
Confidence 3333333332 358999999999999999877777788888765 5677788899999999877778999999999999
Q ss_pred cChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHH
Q 010448 314 KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQL 393 (510)
Q Consensus 314 Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~ 393 (510)
||++.+++|+.++.+++++|+|+|+|+..+++.+++++.+++++|.+.+.++.+++..+|++||++++||.+|+||++++
T Consensus 320 KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~l 399 (489)
T PRK14098 320 QGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQM 399 (489)
T ss_pred CcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHH
Confidence 99999999999998779999999999877788899999888888999999999998899999999999999999999999
Q ss_pred HHHHhCCCcEEecCCCccceEEc----CCceeEeccccccCCCCCccCHHHHHHHHHHHHHhh-CHHHHHHHHHHHhhcc
Q 010448 394 HAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQD 468 (510)
Q Consensus 394 Eama~G~Pvv~s~~gg~~e~v~~----~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~-~~~~~~~~~~~~~~~~ 468 (510)
|||+||+|+|++++||+.|.+.+ +.+|+++ ++.|+++|+++|.++++.. +++.+.+++++++.+.
T Consensus 400 EAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~----------~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~~~~~ 469 (489)
T PRK14098 400 FAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF----------HDYTPEALVAKLGEALALYHDEERWEELVLEAMERD 469 (489)
T ss_pred HHHhCCCCeEEecCCCCceeeecCCCCCCceeEe----------CCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhcCC
Confidence 99999999999999999999875 6799998 8999999999999877543 2677888888888899
Q ss_pred CChHHHHHHHHHHHHHHHH
Q 010448 469 LSWKGPAKKWEETLLNLEV 487 (510)
Q Consensus 469 fs~~~~~~~~~~~y~~l~~ 487 (510)
|||+.++++|.++|+++++
T Consensus 470 fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 470 FSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred CChHHHHHHHHHHHHHHhc
Confidence 9999999999999998864
No 3
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=1.7e-59 Score=486.24 Aligned_cols=443 Identities=36% Similarity=0.596 Sum_probs=354.3
Q ss_pred hhhhHHHHHHHCCCcEEEEeeCCCCcccccCCcE-EEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCCCcc
Q 010448 5 SSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTDV-VIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKI 83 (510)
Q Consensus 5 ~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~~~~ 83 (510)
.++.|+++|+++||+|.|++|.|+.+.+...... ...+..... ...++++...+||++|++++|.|+.+ ...+
T Consensus 25 v~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~f~r-----~~~~ 98 (485)
T PRK14099 25 VAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLFG-GPARLLAARAGGLDLFVLDAPHLYDR-----PGNP 98 (485)
T ss_pred HHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeCC-ceEEEEEEEeCCceEEEEeChHhhCC-----CCCC
Confidence 5789999999999999999999998754332221 112211110 13566777789999999999998864 1237
Q ss_pred cCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEE
Q 010448 84 YGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC 163 (510)
Q Consensus 84 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~t 163 (510)
|+...|.+|.|+..||++|+++++++++.... .++|| |||+|+|+++++|.+++.... .++|+|+|
T Consensus 99 y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~--------~~~pD-IiH~Hdw~~~l~~~~l~~~~~-----~~~~~V~T 164 (485)
T PRK14099 99 YVGPDGKDWPDNAQRFAALARAAAAIGQGLVP--------GFVPD-IVHAHDWQAGLAPAYLHYSGR-----PAPGTVFT 164 (485)
T ss_pred CCCccCCCCCcHHHHHHHHHHHHHHHHhhhcc--------CCCCC-EEEECCcHHHHHHHHHHhCCC-----CCCCEEEe
Confidence 88777788999999999999999998875421 13699 999999999999988864211 36899999
Q ss_pred ecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhh
Q 010448 164 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI 243 (510)
Q Consensus 164 iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~ 243 (510)
+||+.+++.++...+..++++...+.. ... .+...+++++.+++.||.|+|+|+.+++++.+. ..|...+..
T Consensus 165 iHn~~~qg~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~-~~g~gl~~~ 236 (485)
T PRK14099 165 IHNLAFQGQFPRELLGALGLPPSAFSL----DGV---EYYGGIGYLKAGLQLADRITTVSPTYALEIQGP-EAGMGLDGL 236 (485)
T ss_pred CCCCCCCCcCCHHHHHHcCCChHHcCc----hhh---hhCCCccHHHHHHHhcCeeeecChhHHHHHhcc-cCCcChHHH
Confidence 999999998887666666666544321 000 112445778999999999999999999999752 233333222
Q ss_pred h--hcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHH
Q 010448 244 I--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAA 321 (510)
Q Consensus 244 ~--~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~ 321 (510)
+ +..++.+|+||||++.|.|..+..+..+|+.+++ +.+..++..+++++|++.+++.++++++||+.++||++.+++
T Consensus 237 l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~ 315 (485)
T PRK14099 237 LRQRADRLSGILNGIDTAVWNPATDELIAATYDVETL-AARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLE 315 (485)
T ss_pred HHhhCCCeEEEecCCchhhccccccchhhhcCChhHH-HhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHH
Confidence 2 2358999999999999999887777788887764 567777889999999986556789999999999999999999
Q ss_pred HHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCC
Q 010448 322 AIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 401 (510)
Q Consensus 322 a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~P 401 (510)
|+..+.+.+++|+|+|+|++.+++.+++++.++++++..+.++.++....++++||++++||.+|+||++++|||+||+|
T Consensus 316 A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~p 395 (485)
T PRK14099 316 ALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAV 395 (485)
T ss_pred HHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCC
Confidence 99999877899999999987788889999888776675556676665554557899999999999999999999999999
Q ss_pred cEEecCCCccceEEcC---------CceeEeccccccCCCCCccCHHHHHHHHHH---HHHhhCHHHHHHHHHHHhhccC
Q 010448 402 PIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRR---ALATYGTQALAEMMKNGMAQDL 469 (510)
Q Consensus 402 vv~s~~gg~~e~v~~~---------~~G~l~~~~~~~~~~~~~~d~~~la~~i~~---ll~~~~~~~~~~~~~~~~~~~f 469 (510)
+|++++||++|+|.++ .+|+++ ++.|+++|+++|.+ ++++ ++.+.+++++++.++|
T Consensus 396 pVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~----------~~~d~~~La~ai~~a~~l~~d--~~~~~~l~~~~~~~~f 463 (485)
T PRK14099 396 PVVARVGGLADTVVDANEMAIATGVATGVQF----------SPVTADALAAALRKTAALFAD--PVAWRRLQRNGMTTDV 463 (485)
T ss_pred cEEeCCCCccceeecccccccccCCCceEEe----------CCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHhhhhcC
Confidence 9999999999999875 689998 99999999999997 5555 6788889988888899
Q ss_pred ChHHHHHHHHHHHHHHHHc
Q 010448 470 SWKGPAKKWEETLLNLEVA 488 (510)
Q Consensus 470 s~~~~~~~~~~~y~~l~~~ 488 (510)
||++++++|.++|+++++.
T Consensus 464 Sw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 464 SWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred ChHHHHHHHHHHHHHHHhh
Confidence 9999999999999998854
No 4
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=7.3e-57 Score=470.00 Aligned_cols=439 Identities=43% Similarity=0.729 Sum_probs=360.5
Q ss_pred hhhhhHHHHHHHCCCcEEEEeeCCCCcccccC----CcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCC
Q 010448 4 ASSTKLDSFIQANGHRVMTIAPRYDQYKDAWD----TDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 79 (510)
Q Consensus 4 ~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~ 79 (510)
..|..|+++|+++||+|+|++|.|+...+... ......+...+....+++++...+||++++++++.++.+
T Consensus 21 ~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~~~r----- 95 (473)
T TIGR02095 21 DVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLFDR----- 95 (473)
T ss_pred HHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEECCceEEEEECHHHcCC-----
Confidence 46789999999999999999999987655432 122334556666777888888999999999999886642
Q ss_pred CCcccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCc
Q 010448 80 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAK 159 (510)
Q Consensus 80 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~ 159 (510)
...+|+. +|.++..++..|+++++++++..+. +|| |||+|+|++++++.+++..+.. .++|
T Consensus 96 ~~~~y~~----~~~d~~~r~~~f~~a~~~~~~~~~~----------~~D-iiH~hdw~~~~~~~~l~~~~~~----~~~~ 156 (473)
T TIGR02095 96 PGGIYGD----DYPDNAERFAFFSRAAAELLSGLGW----------QPD-VVHAHDWHTALVPALLKAVYRP----NPIK 156 (473)
T ss_pred CCCCCCC----CCCCHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEECCcHHHHHHHHHHhhccC----CCCC
Confidence 1247764 5889999999999999998877543 599 9999999999999998876421 1489
Q ss_pred EEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCc
Q 010448 160 VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVE 239 (510)
Q Consensus 160 ~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~ 239 (510)
+|+|+|++.+++.++...+..++++...+.. ..+ .+...+++++.+++.||.|+++|+.+++++... .+|.+
T Consensus 157 ~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~-~~~~~ 228 (473)
T TIGR02095 157 TVFTIHNLAYQGVFPADDFSELGLPPEYFHM----EGL---EFYGRVNFLKGGIVYADRVTTVSPTYAREILTP-EFGYG 228 (473)
T ss_pred EEEEcCCCccCCcCCHHHHHHcCCChHHcCc----hhh---hcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC-cCCcc
Confidence 9999999998888876555555555433211 000 012356788999999999999999999998752 23433
Q ss_pred hhhhh--hcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChh
Q 010448 240 LDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSD 317 (510)
Q Consensus 240 ~~~~~--~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~ 317 (510)
.+.++ +..++.+|+||+|.+.|.|..+..+..+|+.+.+ ..+...+..+++++|++.+++.++|+|+||+.++||++
T Consensus 229 l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~ 307 (473)
T TIGR02095 229 LDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDL-AGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVD 307 (473)
T ss_pred chhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccch-hhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChH
Confidence 33222 2458999999999999999877777777877653 35666688899999998766779999999999999999
Q ss_pred hHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHH
Q 010448 318 ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 397 (510)
Q Consensus 318 ~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama 397 (510)
.+++|+.++.+.+++|+|+|+|++.+.+.+++++.+++.++.+.+.++.+++..+|++||++++||.+|+||++++|||+
T Consensus 308 ~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma 387 (473)
T TIGR02095 308 LLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMR 387 (473)
T ss_pred HHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHH
Confidence 99999999987789999999998778888999998888788888889999888999999999999999999999999999
Q ss_pred hCCCcEEecCCCccceEEcC------CceeEeccccccCCCCCccCHHHHHHHHHHHHHhh--CHHHHHHHHHHHhhccC
Q 010448 398 YGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDL 469 (510)
Q Consensus 398 ~G~Pvv~s~~gg~~e~v~~~------~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~--~~~~~~~~~~~~~~~~f 469 (510)
||+|||++++||+.|+|.++ .+|+++ ++.|+++++++|.++++.. +++.+.+++++++.++|
T Consensus 388 ~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~~~f 457 (473)
T TIGR02095 388 YGTVPIVRRTGGLADTVVDGDPEAESGTGFLF----------EEYDPGALLAALSRALRLYRQDPSLWEALQKNAMSQDF 457 (473)
T ss_pred CCCCeEEccCCCccceEecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCC
Confidence 99999999999999999998 899998 8999999999999998832 26778889998888899
Q ss_pred ChHHHHHHHHHHHHHH
Q 010448 470 SWKGPAKKWEETLLNL 485 (510)
Q Consensus 470 s~~~~~~~~~~~y~~l 485 (510)
||++++++|.++|+++
T Consensus 458 sw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 458 SWDKSAKQYVELYRSL 473 (473)
T ss_pred CcHHHHHHHHHHHHhC
Confidence 9999999999999864
No 5
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=1.2e-56 Score=466.40 Aligned_cols=433 Identities=38% Similarity=0.615 Sum_probs=346.0
Q ss_pred hhhhhHHHHHHHCCCcEEEEeeCCCCcccccCCc-EEEEEEeCCeEEEEEEEE--EeeCCceEEEEeCccccccccCCCC
Q 010448 4 ASSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTD-VVIELKVGDKIEKVRFFH--CHKRGVDRVFVDHPWFLAKVWGKTQ 80 (510)
Q Consensus 4 ~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~gv~v~~~~~p~~~~~~~~~~~ 80 (510)
..|..|+++|+++||+|+|++|.|+...+..... ....+ ...+++. ...+||+++++++|.+..+
T Consensus 21 ~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~gv~v~~v~~~~~~~~------ 88 (466)
T PRK00654 21 DVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRL------DLFTVLFGHLEGDGVPVYLIDAPHLFDR------ 88 (466)
T ss_pred HHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEe------eeEEEEEEeEEcCCceEEEEeCHHHcCC------
Confidence 4689999999999999999999998765332111 11111 1122332 2458999999999887753
Q ss_pred CcccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcE
Q 010448 81 SKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKV 160 (510)
Q Consensus 81 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~ 160 (510)
..+|+ |.++..||++|++++++.++.++. +|| |||+|+|++++++.+++..+ . ..+.++|+
T Consensus 89 ~~~y~------~~d~~~r~~~f~~~~~~~~~~~~~----------~pD-iiH~h~w~~~~~~~~l~~~~-~-~~~~~~~~ 149 (466)
T PRK00654 89 PSGYG------YPDNGERFAFFSWAAAEFAEGLDP----------RPD-IVHAHDWHTGLIPALLKEKY-W-RGYPDIKT 149 (466)
T ss_pred CCCCC------CcChHHHHHHHHHHHHHHHHhcCC----------CCc-eEEECCcHHHHHHHHHHHhh-h-ccCCCCCE
Confidence 45676 778999999999999998887653 499 99999999999999988654 1 11347999
Q ss_pred EEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCch
Q 010448 161 VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVEL 240 (510)
Q Consensus 161 V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~ 240 (510)
|+|+|++.+++.++...+..++++...+.. ... .+....++++.+++.||.|+|+|+.+++++... .+|...
T Consensus 150 v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~-~~~~gl 221 (466)
T PRK00654 150 VFTIHNLAYQGLFPAEILGELGLPAEAFHL----EGL---EFYGQISFLKAGLYYADRVTTVSPTYAREITTP-EFGYGL 221 (466)
T ss_pred EEEcCCCcCCCcCCHHHHHHcCCChHHcCc----hhh---hcCCcccHHHHHHHhcCcCeeeCHHHHHHhccc-cCCcCh
Confidence 999999999888776555555555433210 000 011346788999999999999999999998752 122222
Q ss_pred hhh--hhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhh
Q 010448 241 DNI--IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDI 318 (510)
Q Consensus 241 ~~~--~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~ 318 (510)
+.. .+..++.+||||||.+.|.|..+..+..+|+...+ +.+...+..+++++|++. ++.++|+|+||+.++||++.
T Consensus 222 ~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~-~~~~~i~~vGRl~~~KG~~~ 299 (466)
T PRK00654 222 EGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDL-EGKAENKRALQERFGLPD-DDAPLFAMVSRLTEQKGLDL 299 (466)
T ss_pred HHHHHhcccCceEecCCCCccccCCccCcccccccChhhh-hchHHHHHHHHHHhCCCC-CCCcEEEEeeccccccChHH
Confidence 111 12458999999999999999877666677776654 466777888999999973 35689999999999999999
Q ss_pred HHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHh
Q 010448 319 LAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY 398 (510)
Q Consensus 319 li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~ 398 (510)
+++|++++.+++++|+|+|+|++.+.+.+++++.+++.++.+..+++.++.+.+|++||++++||.+|+||++++|||+|
T Consensus 300 li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~ 379 (466)
T PRK00654 300 VLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY 379 (466)
T ss_pred HHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHC
Confidence 99999999877999999999987778889999988887777777788888888999999999999999999999999999
Q ss_pred CCCcEEecCCCccceEEcC------CceeEeccccccCCCCCccCHHHHHHHHHHHHHhh-CHHHHHHHHHHHhhccCCh
Q 010448 399 GTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSW 471 (510)
Q Consensus 399 G~Pvv~s~~gg~~e~v~~~------~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~-~~~~~~~~~~~~~~~~fs~ 471 (510)
|+|||++++||+.|++.++ .+|+++ ++.|+++|+++|.++++++ +++.+.+++++++.++|||
T Consensus 380 G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv----------~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~~fsw 449 (466)
T PRK00654 380 GTLPIVRRTGGLADTVIDYNPEDGEATGFVF----------DDFNAEDLLRALRRALELYRQPPLWRALQRQAMAQDFSW 449 (466)
T ss_pred CCCEEEeCCCCccceeecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCh
Confidence 9999999999999999988 899998 9999999999999998753 2566788888888889999
Q ss_pred HHHHHHHHHHHHHHHH
Q 010448 472 KGPAKKWEETLLNLEV 487 (510)
Q Consensus 472 ~~~~~~~~~~y~~l~~ 487 (510)
+.++++|.++|+++++
T Consensus 450 ~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 450 DKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999874
No 6
>PLN02316 synthase/transferase
Probab=100.00 E-value=4e-55 Score=471.34 Aligned_cols=407 Identities=32% Similarity=0.557 Sum_probs=330.6
Q ss_pred hhhhhHHHHHHHCCCcEEEEeeCCCCcccccCCcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCcc-ccccccCCCCCc
Q 010448 4 ASSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPW-FLAKVWGKTQSK 82 (510)
Q Consensus 4 ~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~-~~~~~~~~~~~~ 82 (510)
..|+.|+++|+++||+|.|++|.|+.+.............+.......+++....+||++++++.+. ++. +..
T Consensus 608 DVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~GV~vyfl~~~~~~F~------r~~ 681 (1036)
T PLN02316 608 DVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGKVEGLSVYFLEPQNGMFW------AGC 681 (1036)
T ss_pred HHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEEECCcEEEEEeccccccC------CCC
Confidence 4689999999999999999999998653322111111111111122456777888999999998763 442 244
Q ss_pred ccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEE
Q 010448 83 IYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 162 (510)
Q Consensus 83 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~ 162 (510)
+|+ +.|+..||.+|++++++++++.+. +|| |||+|+|++++++.+++..+...+ +.++|+|+
T Consensus 682 ~Yg------~~Dd~~RF~~F~~Aale~l~~~~~----------~PD-IIHaHDW~talva~llk~~~~~~~-~~~~p~V~ 743 (1036)
T PLN02316 682 VYG------CRNDGERFGFFCHAALEFLLQSGF----------HPD-IIHCHDWSSAPVAWLFKDHYAHYG-LSKARVVF 743 (1036)
T ss_pred CCC------chhHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEECCChHHHHHHHHHHhhhhhc-cCCCCEEE
Confidence 675 789999999999999999887653 599 999999999999999887553222 25799999
Q ss_pred EecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhh
Q 010448 163 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN 242 (510)
Q Consensus 163 tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~ 242 (510)
|+|++.++. +.++.++..||.|+|+|+.+++++... .++..
T Consensus 744 TiHnl~~~~-----------------------------------n~lk~~l~~AD~ViTVS~tya~EI~~~--~~l~~-- 784 (1036)
T PLN02316 744 TIHNLEFGA-----------------------------------NHIGKAMAYADKATTVSPTYSREVSGN--SAIAP-- 784 (1036)
T ss_pred EeCCcccch-----------------------------------hHHHHHHHHCCEEEeCCHHHHHHHHhc--cCccc--
Confidence 999765311 235678899999999999999998752 12221
Q ss_pred hhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHH
Q 010448 243 IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAA 322 (510)
Q Consensus 243 ~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a 322 (510)
...++.+|+||||++.|.|..+..++.+|+.+++.+.|...+..+++++|++. .+.++|+++||+.++||++.|++|
T Consensus 785 --~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~-~d~plVg~VGRL~~qKGvdlLi~A 861 (1036)
T PLN02316 785 --HLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQ-ADLPLVGIITRLTHQKGIHLIKHA 861 (1036)
T ss_pred --ccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCc-ccCeEEEEEeccccccCHHHHHHH
Confidence 12389999999999999998887888888887777778888889999999973 356899999999999999999999
Q ss_pred HHhhhhCCcEEEEEecCC-hhHHHHHHHHHHHC----CCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHH
Q 010448 323 IPHFIKENVQIIVLGTGK-KPMEKQLEQLEILY----PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 397 (510)
Q Consensus 323 ~~~l~~~~~~l~i~G~g~-~~~~~~~~~l~~~~----~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama 397 (510)
+.++.+.+++|+|+|+|+ ..+++.+++++.++ +++|.+.+.+++...+.+|++||++|+||++||||++++|||+
T Consensus 862 l~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa 941 (1036)
T PLN02316 862 IWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMR 941 (1036)
T ss_pred HHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHH
Confidence 999877789999999985 44567777887754 4578888888888777899999999999999999999999999
Q ss_pred hCCCcEEecCCCccceEEcC-------------CceeEeccccccCCCCCccCHHHHHHHHHHHHHhh-C-HHHHHHHHH
Q 010448 398 YGTVPIVASTGGLVDTVEEG-------------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-G-TQALAEMMK 462 (510)
Q Consensus 398 ~G~Pvv~s~~gg~~e~v~~~-------------~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~-~-~~~~~~~~~ 462 (510)
||+|+|++++||++|+|.++ .|||+| ++.|+++|+++|.++++++ + +..+.++++
T Consensus 942 ~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf----------~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r 1011 (1036)
T PLN02316 942 YGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSF----------DGADAAGVDYALNRAISAWYDGRDWFNSLCK 1011 (1036)
T ss_pred cCCCeEEEcCCCcHhhccccccccccccccccCCceEEe----------CCCCHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence 99999999999999999884 699998 9999999999999999874 2 355678888
Q ss_pred HHhhccCChHHHHHHHHHHHHHHH
Q 010448 463 NGMAQDLSWKGPAKKWEETLLNLE 486 (510)
Q Consensus 463 ~~~~~~fs~~~~~~~~~~~y~~l~ 486 (510)
+++.+.|||+.++++|+++|+.+.
T Consensus 1012 ~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 1012 RVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHh
Confidence 888899999999999999999875
No 7
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=9.2e-54 Score=448.05 Aligned_cols=443 Identities=41% Similarity=0.681 Sum_probs=355.2
Q ss_pred hhhhhHHHHHHHCCCcEEEEeeCCCCcccccCCcEE----EEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCC
Q 010448 4 ASSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTDVV----IELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 79 (510)
Q Consensus 4 ~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~ 79 (510)
..+..|+++|+++||+|+|++|.|+........... +.+........++.++...+||++++++.|.+..+
T Consensus 20 ~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~----- 94 (476)
T cd03791 20 DVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDR----- 94 (476)
T ss_pred HHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCCceEEEEcChHHcCC-----
Confidence 467899999999999999999999976654322211 12344455666778888889999999999887753
Q ss_pred CCcccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCc
Q 010448 80 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAK 159 (510)
Q Consensus 80 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~ 159 (510)
..+| ...+.+|.++..+|..|++++++++..++. +|| |||+|+|++++++.+++..+.. ..+.++|
T Consensus 95 -~~~~-~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~----------~pD-viH~hd~~t~~~~~~l~~~~~~-~~~~~~~ 160 (476)
T cd03791 95 -PGLY-DDSGYDYEDNAERFALFSRAALELLRRLGW----------KPD-IIHCHDWHTGLVPALLKEKYAD-PFFKNIK 160 (476)
T ss_pred -CCCC-CccCCCCccHHHHHHHHHHHHHHHHHhcCC----------CCc-EEEECchHHHHHHHHHHHhhcc-ccCCCCC
Confidence 3333 334556889999999999999998887643 599 9999999999999998876432 2235899
Q ss_pred EEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCc
Q 010448 160 VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVE 239 (510)
Q Consensus 160 ~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~ 239 (510)
+|+|+|++.+++.++...+...+...... .......+....++++.++..||.|+++|+.+++.+.+. .+|..
T Consensus 161 ~v~tiH~~~~~g~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~-~~~~g 233 (476)
T cd03791 161 TVFTIHNLAYQGVFPLEALEDLGLPWEEL------FHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTP-EFGEG 233 (476)
T ss_pred EEEEeCCCCCCCCCCHHHHHHcCCCccch------hhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCC-CCCcc
Confidence 99999999988877655444333221000 000011123456788999999999999999999998752 12333
Q ss_pred hhhhhh--cCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChh
Q 010448 240 LDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSD 317 (510)
Q Consensus 240 ~~~~~~--~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~ 317 (510)
.+..+. ..++.+|+||+|.+.|.|..+..+...|+.+ ..+.+...+..+++++|++.+++.++|+|+||+.++||++
T Consensus 234 l~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~-~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~ 312 (476)
T cd03791 234 LDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSAD-DLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGID 312 (476)
T ss_pred hHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCcc-ccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHH
Confidence 222222 3589999999999999988766666666543 3456777888999999997666789999999999999999
Q ss_pred hHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHH
Q 010448 318 ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 397 (510)
Q Consensus 318 ~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama 397 (510)
.+++++.++.+.+++|+++|+|++.+.+.+++++.++.+++.+..+++.++...+|+.||++++||.+|+||++++|||+
T Consensus 313 ~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma 392 (476)
T cd03791 313 LLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMR 392 (476)
T ss_pred HHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhh
Confidence 99999999987789999999998778888898888876778888888888888899999999999999999999999999
Q ss_pred hCCCcEEecCCCccceEEcCC------ceeEeccccccCCCCCccCHHHHHHHHHHHHHhhC-HHHHHHHHHHHhhccCC
Q 010448 398 YGTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLS 470 (510)
Q Consensus 398 ~G~Pvv~s~~gg~~e~v~~~~------~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~~fs 470 (510)
||+|||+++.||+.|++.++. +|+++ ++.|+++++++|.++++++. ++.+.+++++++...||
T Consensus 393 ~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~----------~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~fs 462 (476)
T cd03791 393 YGTVPIVRATGGLADTVIDYNEDTGEGTGFVF----------EGYNADALLAALRRALALYRDPEAWRKLQRNAMAQDFS 462 (476)
T ss_pred CCCCCEECcCCCccceEeCCcCCCCCCCeEEe----------CCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhccCCC
Confidence 999999999999999999987 99998 89999999999999998653 57888999999888999
Q ss_pred hHHHHHHHHHHHH
Q 010448 471 WKGPAKKWEETLL 483 (510)
Q Consensus 471 ~~~~~~~~~~~y~ 483 (510)
|+.++++|.++|+
T Consensus 463 w~~~a~~~~~~y~ 475 (476)
T cd03791 463 WDRSAKEYLELYR 475 (476)
T ss_pred hHHHHHHHHHHHh
Confidence 9999999999996
No 8
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-49 Score=399.33 Aligned_cols=443 Identities=37% Similarity=0.581 Sum_probs=364.8
Q ss_pred hhhhHHHHHHHCCCcEEEEeeCCCCcccccCCc--EEE--EEEeCCeEEEEEEEEEe-eCCceEEEEeCccccccccCCC
Q 010448 5 SSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTD--VVI--ELKVGDKIEKVRFFHCH-KRGVDRVFVDHPWFLAKVWGKT 79 (510)
Q Consensus 5 ~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~-~~gv~v~~~~~p~~~~~~~~~~ 79 (510)
.+..|+++|++.||+|+|+.|.|+......... ... .+............+.. ..|+++++++.|.++++
T Consensus 22 v~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r----- 96 (487)
T COG0297 22 VVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKR----- 96 (487)
T ss_pred HHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeecccCCCcEEEecChhhcCc-----
Confidence 467899999999999999999999666655442 112 22222222222223333 33499999998877753
Q ss_pred CCcccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCc
Q 010448 80 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAK 159 (510)
Q Consensus 80 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~ 159 (510)
. ...+..+.|+..||+.|++++++.+...... ++|| |||+|||+++++|.+++..+. ....+|
T Consensus 97 -~----~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~--------~~pD-IvH~hDWqt~L~~~~lk~~~~---~~~~i~ 159 (487)
T COG0297 97 -P----DSTLYGYYDNAERFAFFSLAAAELAPLGLIS--------WLPD-IVHAHDWQTGLLPAYLKQRYR---SGYIIP 159 (487)
T ss_pred -c----ccccCCCCcHHHHHHHHHHHHHHHhhhcCCC--------CCCC-EEEeecHHHHHHHHHHhhccc---ccccCC
Confidence 1 2233348999999999999999988664410 2599 999999999999999998641 015899
Q ss_pred EEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCc
Q 010448 160 VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVE 239 (510)
Q Consensus 160 ~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~ 239 (510)
.|+|+||+.++|.++......++++...+.... ... ...+++++..+..||.|.+||+.+++++.. ..+|..
T Consensus 160 tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~-l~~------~~~~~~lK~gi~~ad~vttVSptYa~Ei~t-~~~g~g 231 (487)
T COG0297 160 TVFTIHNLAYQGLFRLQYLEELGLPFEAYASFG-LEF------YGQISFLKGGLYYADAVTTVSPTYAGEIYT-PEYGEG 231 (487)
T ss_pred eEEEEeeceeecccchhhHHHhcCCHHHhhhce-eee------cCcchhhhhhheeccEEEEECHHHHHhhcc-cccccc
Confidence 999999999999998555577888865544111 111 144688999999999999999999999983 445555
Q ss_pred hhhhhh--cCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChh
Q 010448 240 LDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSD 317 (510)
Q Consensus 240 ~~~~~~--~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~ 317 (510)
.+.++. ..++..|.||+|.+.|+|..+..+..+|+.+.+. .+..++..+++++|++.+.+.+++.++||++.+||+|
T Consensus 232 l~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~-~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~d 310 (487)
T COG0297 232 LEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLP-AKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLD 310 (487)
T ss_pred chhhhhhccccEEEEEeeEEecccCcccccchhccCCccchh-hhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchh
Confidence 555443 3588999999999999999998888899888865 5888999999999999877889999999999999999
Q ss_pred hHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHH
Q 010448 318 ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 397 (510)
Q Consensus 318 ~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama 397 (510)
.+++++..+.+...++++.|.|+..+++.+..++..+++++....+++....+.+++.+|++++||++||||++.++||.
T Consensus 311 l~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amr 390 (487)
T COG0297 311 LLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMR 390 (487)
T ss_pred HHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHH
Confidence 99999999998889999999999899999999999999888888999999999999999999999999999999999999
Q ss_pred hCCCcEEecCCCccceEEc--------CCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhC-HHH-HHHHHHHHhhc
Q 010448 398 YGTVPIVASTGGLVDTVEE--------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQA-LAEMMKNGMAQ 467 (510)
Q Consensus 398 ~G~Pvv~s~~gg~~e~v~~--------~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~-~~~-~~~~~~~~~~~ 467 (510)
.|+++|+..+||+.|.|.+ .++|++| .+.|+++++.+|.+.+.-+. ++. ++.+..++...
T Consensus 391 yGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f----------~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~~ 460 (487)
T COG0297 391 YGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLF----------LQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMGA 460 (487)
T ss_pred cCCcceEcccCCccceecCccchhccCceeEEEE----------ecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhccc
Confidence 9999999999999999986 4799999 78899999999999888763 344 78888888889
Q ss_pred cCChHHHHHHHHHHHHHHHHc
Q 010448 468 DLSWKGPAKKWEETLLNLEVA 488 (510)
Q Consensus 468 ~fs~~~~~~~~~~~y~~l~~~ 488 (510)
.|+|+..+++|.++|+.+++.
T Consensus 461 d~sw~~sa~~y~~lY~~~~~~ 481 (487)
T COG0297 461 DFSWDLSAKEYVELYKPLLSK 481 (487)
T ss_pred ccCchhHHHHHHHHHHHHhcc
Confidence 999999999999999999865
No 9
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=2.5e-40 Score=339.49 Aligned_cols=370 Identities=19% Similarity=0.232 Sum_probs=265.6
Q ss_pred chhhhhHHHHHHHCCCcEEEEeeCCCCcccccCCcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCCCc
Q 010448 3 NASSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSK 82 (510)
Q Consensus 3 ~~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~~~ 82 (510)
+..+.+||++|+++||+|+|+|+..+.... ...+..+|+++++++.+.+...
T Consensus 23 e~~v~~la~~L~~~G~~V~v~~~~~~~~~~--------------------~~~~~~~~~~v~~~~~~~~~~~-------- 74 (405)
T TIGR03449 23 NVYILETATELARRGIEVDIFTRATRPSQP--------------------PVVEVAPGVRVRNVVAGPYEGL-------- 74 (405)
T ss_pred eehHHHHHHHHhhCCCEEEEEecccCCCCC--------------------CccccCCCcEEEEecCCCcccC--------
Confidence 567899999999999999999986431110 0112347889888754333210
Q ss_pred ccCCCCCCCCCChHHHHHHHHHHHH-HhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEE
Q 010448 83 IYGPRTGEDYQDNQLRFSLLCQAAL-EAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVV 161 (510)
Q Consensus 83 ~y~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V 161 (510)
. .......+..|....+ ..++... .+|| |||+|.+.+.+++.++++. .++|+|
T Consensus 75 --~------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iih~h~~~~~~~~~~~~~~-------~~~p~v 128 (405)
T TIGR03449 75 --D------KEDLPTQLCAFTGGVLRAEARHEP----------GYYD-LIHSHYWLSGQVGWLLRDR-------WGVPLV 128 (405)
T ss_pred --C------HHHHHHHHHHHHHHHHHHHhhccC----------CCCC-eEEechHHHHHHHHHHHHh-------cCCCEE
Confidence 0 0000011112222222 2222221 2599 9999998877777666654 489999
Q ss_pred EEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchh
Q 010448 162 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELD 241 (510)
Q Consensus 162 ~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~ 241 (510)
+|+|+...... . .+.....+. ......+.+..++.+|.++++|+...+.+.+. +|.+.+
T Consensus 129 ~t~h~~~~~~~--~-~~~~~~~~~----------------~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~--~~~~~~ 187 (405)
T TIGR03449 129 HTAHTLAAVKN--A-ALADGDTPE----------------PEARRIGEQQLVDNADRLIANTDEEARDLVRH--YDADPD 187 (405)
T ss_pred EeccchHHHHH--H-hccCCCCCc----------------hHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH--cCCChh
Confidence 99996431000 0 000000000 00011223567889999999999988887652 454433
Q ss_pred hhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHH
Q 010448 242 NIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAA 321 (510)
Q Consensus 242 ~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~ 321 (510)
++.+||||+|.+.|.+.. +...+.+++++. ++++|+|+||+.+.||++.+++
T Consensus 188 ------ki~vi~ngvd~~~~~~~~--------------------~~~~~~~~~~~~--~~~~i~~~G~l~~~K~~~~li~ 239 (405)
T TIGR03449 188 ------RIDVVAPGADLERFRPGD--------------------RATERARLGLPL--DTKVVAFVGRIQPLKAPDVLLR 239 (405)
T ss_pred ------hEEEECCCcCHHHcCCCc--------------------HHHHHHhcCCCC--CCcEEEEecCCCcccCHHHHHH
Confidence 899999999998886542 345567788763 4589999999999999999999
Q ss_pred HHHhhhh--CC--cEEEEEecCC--h-hHHHHHHHHHHHCC--CceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHH
Q 010448 322 AIPHFIK--EN--VQIIVLGTGK--K-PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQ 392 (510)
Q Consensus 322 a~~~l~~--~~--~~l~i~G~g~--~-~~~~~~~~l~~~~~--~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~ 392 (510)
+++++.+ ++ ++|+|+|.+. . ...+.++++..+.+ .+|.+.+..+.+++..+|+.||++++||..|+||+++
T Consensus 240 a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~ 319 (405)
T TIGR03449 240 AVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVA 319 (405)
T ss_pred HHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHH
Confidence 9999865 34 8999999632 1 24556777776654 4688888888888889999999999999999999999
Q ss_pred HHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHHh--hccCC
Q 010448 393 LHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLS 470 (510)
Q Consensus 393 ~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fs 470 (510)
+|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|.+++++ ++.+.+++.++. .++||
T Consensus 320 lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~la~~i~~~l~~--~~~~~~~~~~~~~~~~~fs 387 (405)
T TIGR03449 320 MEAQACGTPVVAARVGGLPVAVADGETGLLV----------DGHDPADWADALARLLDD--PRTRIRMGAAAVEHAAGFS 387 (405)
T ss_pred HHHHHcCCCEEEecCCCcHhhhccCCceEEC----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999998 889999999999999997 555555555542 46799
Q ss_pred hHHHHHHHHHHHHHHHH
Q 010448 471 WKGPAKKWEETLLNLEV 487 (510)
Q Consensus 471 ~~~~~~~~~~~y~~l~~ 487 (510)
|+.++++|.++|++++.
T Consensus 388 w~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 388 WAATADGLLSSYRDALA 404 (405)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998763
No 10
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=5.7e-40 Score=339.21 Aligned_cols=386 Identities=17% Similarity=0.161 Sum_probs=254.0
Q ss_pred chhhhhHHHHHHHCCC--cEEEEeeCCCCcc--cccCCcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCC
Q 010448 3 NASSTKLDSFIQANGH--RVMTIAPRYDQYK--DAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGK 78 (510)
Q Consensus 3 ~~~~~~la~~l~~~Gh--~V~vi~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~ 78 (510)
+..+.+||++|+++|| +|+|+|..++.-. ..+ ....++..+|+++++++.....
T Consensus 29 ~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~----------------~~~~~~~~~gv~v~r~~~~~~~------ 86 (439)
T TIGR02472 29 TKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDY----------------AQPIERIAPGARIVRLPFGPRR------ 86 (439)
T ss_pred chHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCcc----------------CCCeeEeCCCcEEEEecCCCCC------
Confidence 5678899999999998 9999997643210 110 0012344589999988542111
Q ss_pred CCCcccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCC
Q 010448 79 TQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSA 158 (510)
Q Consensus 79 ~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~ 158 (510)
+.. ..+....+..+...+.+.+++... +|| |||+|.+.+++++.++++. .++
T Consensus 87 -----~~~-----~~~~~~~~~~~~~~l~~~~~~~~~----------~~D-vIH~h~~~~~~~~~~~~~~-------~~~ 138 (439)
T TIGR02472 87 -----YLR-----KELLWPYLDELADNLLQHLRQQGH----------LPD-LIHAHYADAGYVGARLSRL-------LGV 138 (439)
T ss_pred -----CcC-----hhhhhhhHHHHHHHHHHHHHHcCC----------CCC-EEEEcchhHHHHHHHHHHH-------hCC
Confidence 110 000111123344455555544321 499 9999998888777776654 488
Q ss_pred cEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCC
Q 010448 159 KVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGV 238 (510)
Q Consensus 159 ~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~ 238 (510)
|+|+|.|+..... .. .+...+........ .+ .....+...+..++.+|.|+++|.......... ..++
T Consensus 139 p~V~t~H~~~~~~-~~--~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-~~~~ 206 (439)
T TIGR02472 139 PLIFTGHSLGREK-RR--RLLAAGLKPQQIEK-----QY---NISRRIEAEEETLAHASLVITSTHQEIEEQYAL-YDSY 206 (439)
T ss_pred CEEEecccccchh-hh--hcccCCCChhhhhh-----hc---chHHHHHHHHHHHHhCCEEEECCHHHHHHHHHh-ccCC
Confidence 9999999643210 00 00000000000000 00 000112345678999999999997654433211 1244
Q ss_pred chhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhh
Q 010448 239 ELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDI 318 (510)
Q Consensus 239 ~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~ 318 (510)
+++ ++.+||||+|.+.|.|.... ......+..+ ++++.+ ++.++|+|+||+.+.||++.
T Consensus 207 ~~~------ki~vIpnGvd~~~f~~~~~~------------~~~~~~~~~~-~~~~~~--~~~~~i~~vGrl~~~Kg~~~ 265 (439)
T TIGR02472 207 QPE------RMQVIPPGVDLSRFYPPQSS------------EETSEIDNLL-APFLKD--PEKPPILAISRPDRRKNIPS 265 (439)
T ss_pred Ccc------ceEEECCCcChhhcCCCCcc------------ccchhHHHHH-Hhhccc--cCCcEEEEEcCCcccCCHHH
Confidence 444 89999999999988764321 0001111222 333433 24579999999999999999
Q ss_pred HHHHHHhhhh--CCcEEE-EEecCCh--hH-------HHHHHHHHHH--CCCceEEeccCCHHHHHHHHHhC----cEEE
Q 010448 319 LAAAIPHFIK--ENVQII-VLGTGKK--PM-------EKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGA----DFIL 380 (510)
Q Consensus 319 li~a~~~l~~--~~~~l~-i~G~g~~--~~-------~~~~~~l~~~--~~~~v~~~~~~~~~~~~~~~~~a----dv~v 380 (510)
+++|+.++.. ++.+++ ++|+|+. .+ .+.+.+++.+ +.++|.+.+.++.+++..+|+.| |+++
T Consensus 266 li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v 345 (439)
T TIGR02472 266 LVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAARSRGIFV 345 (439)
T ss_pred HHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHhhcCCEEe
Confidence 9999986432 234443 5687652 11 1223334444 33568887777888888899877 9999
Q ss_pred eCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHH
Q 010448 381 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 460 (510)
Q Consensus 381 ~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~ 460 (510)
+||.+|+||++++||||||+|||+|+.||+.|++.++.+|+++ +++|+++|+++|.+++++ ++.+.++
T Consensus 346 ~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~~~~~~~ 413 (439)
T TIGR02472 346 NPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLV----------DVLDLEAIASALEDALSD--SSQWQLW 413 (439)
T ss_pred cccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHH
Confidence 9999999999999999999999999999999999999999998 999999999999999998 5555556
Q ss_pred HHHH---hhccCChHHHHHHHHHHHH
Q 010448 461 MKNG---MAQDLSWKGPAKKWEETLL 483 (510)
Q Consensus 461 ~~~~---~~~~fs~~~~~~~~~~~y~ 483 (510)
++++ +.++|||+.++++|.++++
T Consensus 414 ~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 414 SRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 6555 5689999999999998864
No 11
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=5.2e-39 Score=330.34 Aligned_cols=378 Identities=16% Similarity=0.184 Sum_probs=261.1
Q ss_pred chhhhhHHHHHHHCCCcEEEEeeC--CCCcccccCCcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCC
Q 010448 3 NASSTKLDSFIQANGHRVMTIAPR--YDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQ 80 (510)
Q Consensus 3 ~~~~~~la~~l~~~Gh~V~vi~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~ 80 (510)
+..+.+|+++|+++||+|+|+|+. |+..... .........++..+|+++++++......
T Consensus 18 ~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~~------------~~~~~~~~~~~~~~~i~v~r~~~~~~~~------- 78 (412)
T PRK10307 18 GKYTGEMAEWLAARGHEVRVITAPPYYPQWRVG------------EGYSAWRYRRESEGGVTVWRCPLYVPKQ------- 78 (412)
T ss_pred hhhHHHHHHHHHHCCCeEEEEecCCCCCCCCCC------------cccccccceeeecCCeEEEEccccCCCC-------
Confidence 456789999999999999999975 2221100 0000112233446899999885321100
Q ss_pred CcccCCCCCCCCCChHHHHHHHHHHHHHh-hhhcCcCCCCCCCCCCCCCeEEEeccchh--hhHHHHHHHhhcCCCCCCC
Q 010448 81 SKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHT--SLIPCYLKTMYKPKGMYKS 157 (510)
Q Consensus 81 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~pD~iih~h~~~~--~~~~~~l~~~~~~~~~~~~ 157 (510)
. .+ ......+..|....... .+... ++|| |||+|.+.. ..++.+++++ .+
T Consensus 79 ----~--~~---~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iv~~~~p~~~~~~~~~~~~~~-------~~ 131 (412)
T PRK10307 79 ----P--SG---LKRLLHLGSFALSSFFPLLAQRR----------WRPD-RVIGVVPTLFCAPGARLLARL-------SG 131 (412)
T ss_pred ----c--cH---HHHHHHHHHHHHHHHHHHhhccC----------CCCC-EEEEeCCcHHHHHHHHHHHHh-------hC
Confidence 0 00 00111112222222222 22221 2599 999997543 2333344443 47
Q ss_pred CcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCC
Q 010448 158 AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKG 237 (510)
Q Consensus 158 ~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g 237 (510)
+|+|+++|+..... ............. .....+++..++.+|.|+++|+.+++.+.+ .|
T Consensus 132 ~~~v~~~~d~~~~~-----~~~~~~~~~~~~~-------------~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~---~~ 190 (412)
T PRK10307 132 ARTWLHIQDYEVDA-----AFGLGLLKGGKVA-------------RLATAFERSLLRRFDNVSTISRSMMNKARE---KG 190 (412)
T ss_pred CCEEEEeccCCHHH-----HHHhCCccCcHHH-------------HHHHHHHHHHHhhCCEEEecCHHHHHHHHH---cC
Confidence 89999999644211 1000000000000 001134577889999999999999999886 45
Q ss_pred CchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChh
Q 010448 238 VELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSD 317 (510)
Q Consensus 238 ~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~ 317 (510)
.+.+ ++.+||||+|.+.|.+.... ....++++++++ ++.++++|+|++.+.||++
T Consensus 191 ~~~~------~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~--~~~~~i~~~G~l~~~kg~~ 245 (412)
T PRK10307 191 VAAE------KVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLP--DGKKIVLYSGNIGEKQGLE 245 (412)
T ss_pred CCcc------cEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCC--CCCEEEEEcCccccccCHH
Confidence 5433 89999999999888654320 133567778876 3458999999999999999
Q ss_pred hHHHHHHhhhh-CCcEEEEEecCChhHHHHHHHHHHHCC-CceEEeccCCHHHHHHHHHhCcEEEeCCCCCC----ccHH
Q 010448 318 ILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGADFILIPSRFEP----CGLI 391 (510)
Q Consensus 318 ~li~a~~~l~~-~~~~l~i~G~g~~~~~~~~~~l~~~~~-~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~----~g~~ 391 (510)
.|++|++++.+ ++++|+|+|+|+ ..+.+++++.+++ .+|.+.+..+.+++..+|++||++++||..|+ +|.+
T Consensus 246 ~li~a~~~l~~~~~~~l~ivG~g~--~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~k 323 (412)
T PRK10307 246 LVIDAARRLRDRPDLIFVICGQGG--GKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSK 323 (412)
T ss_pred HHHHHHHHhccCCCeEEEEECCCh--hHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHH
Confidence 99999998865 579999999998 5566777766543 26888888888899999999999999999988 5778
Q ss_pred HHHHHHhCCCcEEecCCC--ccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHH---hh
Q 010448 392 QLHAMRYGTVPIVASTGG--LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MA 466 (510)
Q Consensus 392 ~~Eama~G~Pvv~s~~gg--~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~ 466 (510)
++|||+||+|||+|+.+| +.+++. .+|+++ +++|+++++++|.+++++ ++.+.++++++ +.
T Consensus 324 l~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~----------~~~d~~~la~~i~~l~~~--~~~~~~~~~~a~~~~~ 389 (412)
T PRK10307 324 LTNMLASGRNVVATAEPGTELGQLVE--GIGVCV----------EPESVEALVAAIAALARQ--ALLRPKLGTVAREYAE 389 (412)
T ss_pred HHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHH
Confidence 999999999999999876 457776 599998 899999999999999998 55555555554 56
Q ss_pred ccCChHHHHHHHHHHHHHHHHc
Q 010448 467 QDLSWKGPAKKWEETLLNLEVA 488 (510)
Q Consensus 467 ~~fs~~~~~~~~~~~y~~l~~~ 488 (510)
++|||+.++++|.++|++++.+
T Consensus 390 ~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 390 RTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred HHcCHHHHHHHHHHHHHHHhcC
Confidence 7899999999999999998854
No 12
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=4.6e-39 Score=346.16 Aligned_cols=427 Identities=15% Similarity=0.113 Sum_probs=269.1
Q ss_pred hhhhhHHHHHHHCC--CcEEEEeeCCCC--cccccCCcEEEEEEeCCe-EEEEEEEEEeeCCceEEEEeCccc---cccc
Q 010448 4 ASSTKLDSFIQANG--HRVMTIAPRYDQ--YKDAWDTDVVIELKVGDK-IEKVRFFHCHKRGVDRVFVDHPWF---LAKV 75 (510)
Q Consensus 4 ~~~~~la~~l~~~G--h~V~vi~p~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gv~v~~~~~p~~---~~~~ 75 (510)
..|.+||++|+++| |+|+|+|-.... ....+... . + .+.+. .+..........|+.+++++..+- .++
T Consensus 199 vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p-~-e-~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~~~l~K- 274 (1050)
T TIGR02468 199 KYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEP-T-E-MLTPRSSENDGDEMGESSGAYIIRIPFGPRDKYIPK- 274 (1050)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCc-c-c-cccccccccccccccCCCCeEEEEeccCCCCCCcCH-
Confidence 46889999999999 999999965321 10000000 0 0 00000 000001111245899998864321 211
Q ss_pred cCCCCCcccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCC--CCCCCeEEEeccchhhhHHHHHHHhhcCCC
Q 010448 76 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSG--PYGEDVVFVANDWHTSLIPCYLKTMYKPKG 153 (510)
Q Consensus 76 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~pD~iih~h~~~~~~~~~~l~~~~~~~~ 153 (510)
...+-.+..|...++..+.+.....-..+.+ ...|| |||+|.|.++.++..++..
T Consensus 275 -----------------e~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pD-vIHaHyw~sG~aa~~L~~~----- 331 (1050)
T TIGR02468 275 -----------------EELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPY-VIHGHYADAGDSAALLSGA----- 331 (1050)
T ss_pred -----------------HHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC-EEEECcchHHHHHHHHHHh-----
Confidence 1112233445555554433210000000000 01389 9999999999999998876
Q ss_pred CCCCCcEEEEecCCCcccccCccchhhcCC-C-hhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHh
Q 010448 154 MYKSAKVVFCIHNIAYQGRFAFEDFGLLNL-P-AQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELV 231 (510)
Q Consensus 154 ~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~ 231 (510)
.++|+|+|.|.+...... .....+. . ..+ ...| .....+..++.++..||.|||+|+...+++.
T Consensus 332 --lgVP~V~T~HSLgr~K~~---~ll~~g~~~~~~~------~~~y---~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~ 397 (1050)
T TIGR02468 332 --LNVPMVLTGHSLGRDKLE---QLLKQGRMSKEEI------NSTY---KIMRRIEAEELSLDASEIVITSTRQEIEEQW 397 (1050)
T ss_pred --hCCCEEEECccchhhhhh---hhccccccccccc------cccc---chHHHHHHHHHHHHhcCEEEEeCHHHHHHHH
Confidence 499999999976321100 0000000 0 000 0000 0113445568889999999999999998765
Q ss_pred cCCCCCCchh--hh----h---------hcCCceEecCCCCCCCCCCCCccccccCCCcC-ChhhchHHHHHHHHHHhCC
Q 010448 232 SGEDKGVELD--NI----I---------RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS-TVMDAKPLLKEALQAEVGL 295 (510)
Q Consensus 232 ~~~~~g~~~~--~~----~---------~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~ 295 (510)
..+ .+.++. .. + ...++.|||||||++.|.|.....-....... ......+.....+++.+.-
T Consensus 398 ~lY-~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 476 (1050)
T TIGR02468 398 GLY-DGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFTN 476 (1050)
T ss_pred HHh-ccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHhhccc
Confidence 431 111210 00 0 01289999999999999885321000000000 0000000012233443332
Q ss_pred CCCCCCcEEEEecCcccccChhhHHHHHHhhhh----CCcEEEEEecCCh---------hHHHHHHHHHHHCC--CceEE
Q 010448 296 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK----ENVQIIVLGTGKK---------PMEKQLEQLEILYP--EKARG 360 (510)
Q Consensus 296 ~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~----~~~~l~i~G~g~~---------~~~~~~~~l~~~~~--~~v~~ 360 (510)
+++++|+|+||+.+.||++.||+|+.++.+ +++. +|+|+|+. .....+.+++.+++ ++|.+
T Consensus 477 ---pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~F 552 (1050)
T TIGR02468 477 ---PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAY 552 (1050)
T ss_pred ---CCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEe
Confidence 366899999999999999999999999864 2555 46787642 12244566666544 46888
Q ss_pred eccCCHHHHHHHHHhC----cEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCcc
Q 010448 361 VAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 436 (510)
Q Consensus 361 ~~~~~~~~~~~~~~~a----dv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~ 436 (510)
.+..+.+++..+|+.| |+||+||.+|+||++++||||||+|||+|+.||+.|++.++.+|+++ +|.
T Consensus 553 lG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLV----------dP~ 622 (1050)
T TIGR02468 553 PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLV----------DPH 622 (1050)
T ss_pred cCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEE----------CCC
Confidence 8877888888899887 69999999999999999999999999999999999999999999998 999
Q ss_pred CHHHHHHHHHHHHHhhCHHHHHHHHHHHh--hccCChHHHHHHHHHHHHHHHHc
Q 010448 437 DVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVA 488 (510)
Q Consensus 437 d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~~~~~~~~y~~l~~~ 488 (510)
|+++|+++|.+++++ ++.+.++++++. ..+|||+.++++|.+.+..+..+
T Consensus 623 D~eaLA~AL~~LL~D--pelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~ 674 (1050)
T TIGR02468 623 DQQAIADALLKLVAD--KQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPR 674 (1050)
T ss_pred CHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhcc
Confidence 999999999999998 666666666652 35799999999999999988754
No 13
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=1.8e-38 Score=324.73 Aligned_cols=348 Identities=18% Similarity=0.219 Sum_probs=246.2
Q ss_pred chhhhhHHHHHHHCCCcEEEEeeCCCCcccccCCcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCCCc
Q 010448 3 NASSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSK 82 (510)
Q Consensus 3 ~~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~~~ 82 (510)
+..+..|+++|+++||+|+|+|+.++.... .+...+|++++.++....... .
T Consensus 17 e~~~~~la~~L~~~G~~V~v~~~~~~~~~~---------------------~~~~~~~i~v~~~p~~~~~~~-------~ 68 (398)
T cd03796 17 ETHIYQLSQCLIKRGHKVVVITHAYGNRVG---------------------IRYLTNGLKVYYLPFVVFYNQ-------S 68 (398)
T ss_pred HHHHHHHHHHHHHcCCeeEEEeccCCcCCC---------------------cccccCceeEEEecceeccCC-------c
Confidence 457889999999999999999987532210 011135777777643222110 0
Q ss_pred ccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHH--HHHHHhhcCCCCCCCCcE
Q 010448 83 IYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP--CYLKTMYKPKGMYKSAKV 160 (510)
Q Consensus 83 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~--~~l~~~~~~~~~~~~~~~ 160 (510)
.. . .+..+...+...+.+. +|| |||+|.+.+.+.. .++.+. .++|+
T Consensus 69 ~~--------~----~~~~~~~~l~~~~~~~------------~~D-iIh~~~~~~~~~~~~~~~~~~-------~~~~~ 116 (398)
T cd03796 69 TL--------P----TFFGTFPLLRNILIRE------------RIT-IVHGHQAFSALAHEALLHART-------MGLKT 116 (398)
T ss_pred cc--------c----chhhhHHHHHHHHHhc------------CCC-EEEECCCCchHHHHHHHHhhh-------cCCcE
Confidence 00 0 1111112222233222 599 9999986654332 222222 48999
Q ss_pred EEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCch
Q 010448 161 VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVEL 240 (510)
Q Consensus 161 V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~ 240 (510)
|+|.|+..... ... .. ....+.+..++.+|.++++|+...+.+... .+++.
T Consensus 117 v~t~h~~~~~~-----~~~-----~~-----------------~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--~~~~~ 167 (398)
T cd03796 117 VFTDHSLFGFA-----DAS-----SI-----------------HTNKLLRFSLADVDHVICVSHTSKENTVLR--ASLDP 167 (398)
T ss_pred EEEeccccccc-----chh-----hH-----------------HhhHHHHHhhccCCEEEEecHhHhhHHHHH--hCCCh
Confidence 99999642100 000 00 011234666889999999999998865321 34443
Q ss_pred hhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHH
Q 010448 241 DNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA 320 (510)
Q Consensus 241 ~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li 320 (510)
+ ++.+||||+|.+.|.+.... .++++++++|+||+.+.||++.++
T Consensus 168 ~------k~~vi~ngvd~~~f~~~~~~-----------------------------~~~~~~~i~~~grl~~~Kg~~~li 212 (398)
T cd03796 168 E------RVSVIPNAVDSSDFTPDPSK-----------------------------RDNDKITIVVISRLVYRKGIDLLV 212 (398)
T ss_pred h------hEEEEcCccCHHHcCCCccc-----------------------------CCCCceEEEEEeccchhcCHHHHH
Confidence 3 89999999998877654320 113568999999999999999999
Q ss_pred HHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCC--CceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHH
Q 010448 321 AAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAM 396 (510)
Q Consensus 321 ~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eam 396 (510)
+|+..+.+ ++++|+|+|+|+ ..+.++++..+.+ ++|.+.+..+.+++..+|+++|++++||..|+||++++|||
T Consensus 213 ~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAm 290 (398)
T cd03796 213 GIIPEICKKHPNVRFIIGGDGP--KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAA 290 (398)
T ss_pred HHHHHHHhhCCCEEEEEEeCCc--hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHH
Confidence 99998875 689999999987 4555666666543 46888888888888899999999999999999999999999
Q ss_pred HhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHH-HHHHHHHHHhhccCChHHHH
Q 010448 397 RYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPA 475 (510)
Q Consensus 397 a~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~-~~~~~~~~~~~~~fs~~~~~ 475 (510)
+||+|||+++.||..|++.++. +++ .+.|+++++++|.+++++.... ...+.+++.+.++|||+.++
T Consensus 291 a~G~PVI~s~~gg~~e~i~~~~-~~~-----------~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs~~~~~ 358 (398)
T cd03796 291 SCGLLVVSTRVGGIPEVLPPDM-ILL-----------AEPDVESIVRKLEEAISILRTGKHDPWSFHNRVKKMYSWEDVA 358 (398)
T ss_pred HcCCCEEECCCCCchhheeCCc-eee-----------cCCCHHHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCCHHHHH
Confidence 9999999999999999998764 433 3458999999999999873222 22344445578899999999
Q ss_pred HHHHHHHHHHHHc
Q 010448 476 KKWEETLLNLEVA 488 (510)
Q Consensus 476 ~~~~~~y~~l~~~ 488 (510)
++|.++|+.++..
T Consensus 359 ~~~~~~y~~l~~~ 371 (398)
T cd03796 359 KRTEKVYDRILQT 371 (398)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999865
No 14
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=2.2e-38 Score=329.91 Aligned_cols=287 Identities=20% Similarity=0.268 Sum_probs=220.2
Q ss_pred CCCeEEEeccchhh-hHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCC
Q 010448 126 GEDVVFVANDWHTS-LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 204 (510)
Q Consensus 126 ~pD~iih~h~~~~~-~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (510)
+|| |||+|..... +.+..+.+. .++|+|++.|+.... ..+. .... .+ ...
T Consensus 144 kpD-iIh~~~~~~~~~~~~~~ak~-------~~ip~V~~~h~~~~~-~~~~-----~~~~-~~--------------~~~ 194 (465)
T PLN02871 144 KPD-LIHASSPGIMVFGALFYAKL-------LCVPLVMSYHTHVPV-YIPR-----YTFS-WL--------------VKP 194 (465)
T ss_pred CCC-EEEECCCchhHHHHHHHHHH-------hCCCEEEEEecCchh-hhhc-----ccch-hh--------------HHH
Confidence 599 9999975432 233333332 489999999953210 0000 0000 00 001
Q ss_pred cchHHHHHHHhccceeecCHHHHHHHhcCCCCCC-chhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchH
Q 010448 205 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGV-ELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 283 (510)
Q Consensus 205 ~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~-~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (510)
...+++..++.+|.|+++|+.+.+.+.+ .|. +. .++.+||||+|.+.|.|...
T Consensus 195 ~~~~~r~~~~~ad~ii~~S~~~~~~l~~---~~~~~~------~kv~vi~nGvd~~~f~p~~~----------------- 248 (465)
T PLN02871 195 MWDIIRFLHRAADLTLVTSPALGKELEA---AGVTAA------NRIRVWNKGVDSESFHPRFR----------------- 248 (465)
T ss_pred HHHHHHHHHhhCCEEEECCHHHHHHHHH---cCCCCc------CeEEEeCCccCccccCCccc-----------------
Confidence 1233466788999999999999999986 332 22 28999999999998876532
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEecc
Q 010448 284 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 363 (510)
Q Consensus 284 ~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~ 363 (510)
....++++.... ++.++|+|+||+.+.||++.++++++++ ++++|+|+|+|+ ..+.+++++... +|.+.+.
T Consensus 249 --~~~~~~~~~~~~-~~~~~i~~vGrl~~~K~~~~li~a~~~~--~~~~l~ivG~G~--~~~~l~~~~~~~--~V~f~G~ 319 (465)
T PLN02871 249 --SEEMRARLSGGE-PEKPLIVYVGRLGAEKNLDFLKRVMERL--PGARLAFVGDGP--YREELEKMFAGT--PTVFTGM 319 (465)
T ss_pred --cHHHHHHhcCCC-CCCeEEEEeCCCchhhhHHHHHHHHHhC--CCcEEEEEeCCh--HHHHHHHHhccC--CeEEecc
Confidence 223444443221 2568999999999999999999999887 589999999988 566777776653 5888888
Q ss_pred CCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEc---CCceeEeccccccCCCCCccCHHH
Q 010448 364 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---GFTGFQMGSFSVDCEAVDPVDVAA 440 (510)
Q Consensus 364 ~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~---~~~G~l~~~~~~~~~~~~~~d~~~ 440 (510)
.+.+++..+|+.||++|+||..|++|++++|||+||+|||+++.||+.|++.+ +.+|+++ +++|+++
T Consensus 320 v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv----------~~~d~~~ 389 (465)
T PLN02871 320 LQGDELSQAYASGDVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLY----------TPGDVDD 389 (465)
T ss_pred CCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEe----------CCCCHHH
Confidence 88888889999999999999999999999999999999999999999999999 9999998 8999999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHH--hhccCChHHHHHHHHH-HHHHHHHc
Q 010448 441 VSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEE-TLLNLEVA 488 (510)
Q Consensus 441 la~~i~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~~~~~~~-~y~~l~~~ 488 (510)
++++|.+++++ ++.+.++++++ ..++|||+.+++++.+ .|++++..
T Consensus 390 la~~i~~ll~~--~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 390 CVEKLETLLAD--PELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHHHHHHhC--HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999998 56666666655 2468999999999998 79988764
No 15
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=2.2e-37 Score=327.40 Aligned_cols=319 Identities=16% Similarity=0.207 Sum_probs=219.0
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| +||+|.|.+++++..++.. .++|+|.|.|.+.... .............+. . ....
T Consensus 385 ~pD-lIHahy~d~glva~lla~~-------lgVP~v~t~HsL~~~K-~~~~g~~~~~~e~~~------------~-~~~r 442 (784)
T TIGR02470 385 KPD-LIIGNYSDGNLVASLLARK-------LGVTQCTIAHALEKTK-YPDSDIYWQEFEDKY------------H-FSCQ 442 (784)
T ss_pred CCC-EEEECCCchHHHHHHHHHh-------cCCCEEEECCcchhhc-ccccccccccchhHH------------H-hhhh
Confidence 499 9999999999999888876 4999999999775421 111000000000000 0 0001
Q ss_pred chHHHHHHHhccceeecCHHHHHH----HhcC---C------C----CCCchhhhhhcCCceEecCCCCCCCCCCCCccc
Q 010448 206 INWMKAGILESDMVLTVSPHYAQE----LVSG---E------D----KGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKY 268 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~----l~~~---~------~----~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~ 268 (510)
+.....+++.||.|||+|...... +.++ . . .|++ ....|+.+||+|+|...|.|.....
T Consensus 443 ~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid----~~~~Ki~VVpPGVD~~iF~P~~~~~ 518 (784)
T TIGR02470 443 FTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGID----VFDPKFNIVSPGADESIYFPYSDKE 518 (784)
T ss_pred hhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCcc----CCcCCeEEECCCcChhhcCCCCchh
Confidence 112346788899999999755332 2110 0 0 1221 1234899999999999887744210
Q ss_pred cccCCC-cCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCCh----
Q 010448 269 IGVKYD-ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK---- 341 (510)
Q Consensus 269 ~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~---- 341 (510)
.+.. ...-.+....++...++.+|+..++++++|+++||+++.||++.|++|+.++.. ++++|+|+|++..
T Consensus 519 --~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s 596 (784)
T TIGR02470 519 --KRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKES 596 (784)
T ss_pred --hhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccc
Confidence 0000 000000001123445677887656678999999999999999999999987643 4789999997642
Q ss_pred ---h---HHHHHHHHHHHCC--CceEEeccC-CHHHHHHHHH----hCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCC
Q 010448 342 ---P---MEKQLEQLEILYP--EKARGVAKF-NIPLAHMIIA----GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 408 (510)
Q Consensus 342 ---~---~~~~~~~l~~~~~--~~v~~~~~~-~~~~~~~~~~----~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~g 408 (510)
+ ..+.+.+++.+++ ++|.+.+.. +.....++|+ ++|++++||.+|+||++++||||||+|||+|+.|
T Consensus 597 ~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G 676 (784)
T TIGR02470 597 KDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG 676 (784)
T ss_pred cchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC
Confidence 1 2345666776654 578877754 3333333443 4589999999999999999999999999999999
Q ss_pred CccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHh--hCHHHHHHHHHHH---hhccCChHHHHHHHHHHH
Q 010448 409 GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNG---MAQDLSWKGPAKKWEETL 482 (510)
Q Consensus 409 g~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~--~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~~y 482 (510)
|+.|+|.++.+|+++ +|.|+++++++|.++++. .+++.+.++++++ +.++|||+.+++++.++.
T Consensus 677 G~~EiV~dg~tGfLV----------dp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 677 GPLEIIQDGVSGFHI----------DPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred CHHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999998 999999999999998741 1266777777665 468999999999998876
No 16
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=1.8e-37 Score=314.52 Aligned_cols=346 Identities=17% Similarity=0.263 Sum_probs=249.3
Q ss_pred chhhhhHHHHHHHCCCcEEEEeeCCCCcccccCCcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCCCc
Q 010448 3 NASSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSK 82 (510)
Q Consensus 3 ~~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~~~ 82 (510)
|.++.++++.|++ +|+|+|-..+.+++. +...+|+.+.++..+......+ .+
T Consensus 24 e~~~~~~~~~l~~---~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~----~~ 75 (380)
T PRK15484 24 ETWIYQVAKRTSI---PNRIACIKNPGYPEY---------------------TKVNDNCDIHYIGFSRIYKRLF----QK 75 (380)
T ss_pred HHHHHHhhhhccC---CeeEEEecCCCCCch---------------------hhccCCCceEEEEeccccchhh----hh
Confidence 4567788888854 999999876543322 1223678888775443332100 00
Q ss_pred ccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEE
Q 010448 83 IYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 162 (510)
Q Consensus 83 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~ 162 (510)
.+. +....+...++..+..... .++| |||+|+... +... ++... .+.|+|+
T Consensus 76 ~~~-----------~~~~~~~~~~~~~~~~~~~---------~~~~-vi~v~~~~~-~~~~-~~~~~------~~~~~v~ 126 (380)
T PRK15484 76 WTR-----------LDPLPYSQRILNIAHKFTI---------TKDS-VIVIHNSMK-LYRQ-IRERA------PQAKLVM 126 (380)
T ss_pred hhc-----------cCchhHHHHHHHHHHhcCC---------CCCc-EEEEeCcHH-hHHH-HHhhC------CCCCEEE
Confidence 000 0112233333333333211 1367 999997432 2222 22222 5789999
Q ss_pred EecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhh
Q 010448 163 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN 242 (510)
Q Consensus 163 tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~ 242 (510)
++|+... ...+..++.++++|+..++.+.+. .+
T Consensus 127 ~~h~~~~----------------------------------------~~~~~~~~~ii~~S~~~~~~~~~~----~~--- 159 (380)
T PRK15484 127 HMHNAFE----------------------------------------PELLDKNAKIIVPSQFLKKFYEER----LP--- 159 (380)
T ss_pred EEecccC----------------------------------------hhHhccCCEEEEcCHHHHHHHHhh----CC---
Confidence 9995311 112346799999999999988752 12
Q ss_pred hhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHH
Q 010448 243 IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAA 322 (510)
Q Consensus 243 ~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a 322 (510)
..++.+||||+|.+.|.+.. ...++++++++. +.++|+|+||+.+.||++.+++|
T Consensus 160 ---~~~i~vIpngvd~~~~~~~~--------------------~~~~~~~~~~~~--~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 160 ---NADISIVPNGFCLETYQSNP--------------------QPNLRQQLNISP--DETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ---CCCEEEecCCCCHHHcCCcc--------------------hHHHHHHhCCCC--CCeEEEEeccCccccCHHHHHHH
Confidence 22789999999988776532 345567788763 45799999999999999999999
Q ss_pred HHhhhh--CCcEEEEEecCC-------hhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCC-CCccHHH
Q 010448 323 IPHFIK--ENVQIIVLGTGK-------KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQ 392 (510)
Q Consensus 323 ~~~l~~--~~~~l~i~G~g~-------~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~-E~~g~~~ 392 (510)
+.++.+ ++++|+|+|+|. ..+.+.+++++.+++.++.+.+..+.+++..+|++||++++||.+ |+||+++
T Consensus 215 ~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~ 294 (380)
T PRK15484 215 FEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVA 294 (380)
T ss_pred HHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHH
Confidence 999875 689999999875 235566777777777788888888888888999999999999986 9999999
Q ss_pred HHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHHhhccCChH
Q 010448 393 LHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 472 (510)
Q Consensus 393 ~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fs~~ 472 (510)
+||||||+|||+|+.||++|++.++.+|+++ +++.|+++++++|.+++++++...+.+.+++.+.++|||+
T Consensus 295 lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l---------~~~~d~~~la~~I~~ll~d~~~~~~~~~ar~~~~~~fsw~ 365 (380)
T PRK15484 295 VEAMAAGKPVLASTKGGITEFVLEGITGYHL---------AEPMTSDSIISDINRTLADPELTQIAEQAKDFVFSKYSWE 365 (380)
T ss_pred HHHHHcCCCEEEeCCCCcHhhcccCCceEEE---------eCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHH
Confidence 9999999999999999999999999999943 2789999999999999998422233333333457899999
Q ss_pred HHHHHHHHHHHHHH
Q 010448 473 GPAKKWEETLLNLE 486 (510)
Q Consensus 473 ~~~~~~~~~y~~l~ 486 (510)
.++++|+++|+...
T Consensus 366 ~~a~~~~~~l~~~~ 379 (380)
T PRK15484 366 GVTQRFEEQIHNWF 379 (380)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998653
No 17
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=2.9e-37 Score=315.05 Aligned_cols=275 Identities=20% Similarity=0.225 Sum_probs=220.1
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| +||+|.++.+.....++.... .+.|+++|+|+.+..... . ....
T Consensus 118 ~~d-iihaH~~~~~~~~~~~~~~~~-----~~~~~~~t~Hg~d~~~~~-------------~--------------~~~~ 164 (406)
T PRK15427 118 VAD-VFIAHFGPAGVTAAKLRELGV-----LRGKIATIFHGIDISSRE-------------V--------------LNHY 164 (406)
T ss_pred CCC-EEEEcCChHHHHHHHHHHhCC-----CCCCeEEEEcccccccch-------------h--------------hhhh
Confidence 599 999998877666666554211 245778999965421100 0 0001
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
...++..++++|.++++|+..++.+.+ .|.+.+ ++.+||||+|.+.|.+....
T Consensus 165 ~~~~~~~~~~ad~vv~~S~~~~~~l~~---~g~~~~------ki~vi~nGvd~~~f~~~~~~------------------ 217 (406)
T PRK15427 165 TPEYQQLFRRGDLMLPISDLWAGRLQK---MGCPPE------KIAVSRMGVDMTRFSPRPVK------------------ 217 (406)
T ss_pred hHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCHH------HEEEcCCCCCHHHcCCCccc------------------
Confidence 124566788999999999999999986 566655 89999999999888653210
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCC--CceEEe
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGV 361 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v~~~ 361 (510)
...+.+.|+|+||+.+.||++.+++|++.+.+ ++++++|+|+|+ ..+.++++..+++ ++|.+.
T Consensus 218 -----------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~--~~~~l~~~~~~~~l~~~V~~~ 284 (406)
T PRK15427 218 -----------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGP--WERRLRTLIEQYQLEDVVEMP 284 (406)
T ss_pred -----------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECch--hHHHHHHHHHHcCCCCeEEEe
Confidence 01244789999999999999999999999976 589999999998 5667777777654 468888
Q ss_pred ccCCHHHHHHHHHhCcEEEeCCCC------CCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCc
Q 010448 362 AKFNIPLAHMIIAGADFILIPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 435 (510)
Q Consensus 362 ~~~~~~~~~~~~~~adv~v~ps~~------E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~ 435 (510)
+..+.+++..+|+.||++++||.. ||+|++++|||+||+|||+|+.||++|++.++.+|+++ ++
T Consensus 285 G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv----------~~ 354 (406)
T PRK15427 285 GFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV----------PE 354 (406)
T ss_pred CCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe----------CC
Confidence 888888888999999999999974 99999999999999999999999999999999999998 89
Q ss_pred cCHHHHHHHHHHHHH-hhCHHHHHHHHHHH---hhccCChHHHHHHHHHHHHHH
Q 010448 436 VDVAAVSTTVRRALA-TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 485 (510)
Q Consensus 436 ~d~~~la~~i~~ll~-~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~~y~~l 485 (510)
+|+++++++|.++++ + ++.+.++++++ +.++|+|+.+++++.++|+++
T Consensus 355 ~d~~~la~ai~~l~~~d--~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~~ 406 (406)
T PRK15427 355 NDAQALAQRLAAFSQLD--TDELAPVVKRAREKVETDFNQQVINRELASLLQAL 406 (406)
T ss_pred CCHHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 999999999999999 7 55555555554 678999999999999999763
No 18
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=5.5e-37 Score=312.90 Aligned_cols=291 Identities=24% Similarity=0.357 Sum_probs=224.1
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
++| |||+|.+.+.+.+.++++. .++|+|+|+|+......+.... ... ++ ...
T Consensus 83 ~~d-ivh~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~~~~~~~~---~~~------------~~-----~~~ 134 (388)
T TIGR02149 83 DAD-VVHSHTWYTFLAGHLAKKL-------YDKPLVVTAHSLEPLRPWKEEQ---LGG------------GY-----KLS 134 (388)
T ss_pred CCC-eEeecchhhhhHHHHHHHh-------cCCCEEEEeecccccccccccc---ccc------------ch-----hHH
Confidence 489 9999998877666655543 4899999999754322111000 000 00 001
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
..+.+..++.+|.|+++|+.+++.+.+.. .+++.+ ++.+||||+|.+.|.+..
T Consensus 135 ~~~~~~~~~~ad~vi~~S~~~~~~~~~~~-~~~~~~------~i~vi~ng~~~~~~~~~~-------------------- 187 (388)
T TIGR02149 135 SWAEKTAIEAADRVIAVSGGMREDILKYY-PDLDPE------KVHVIYNGIDTKEYKPDD-------------------- 187 (388)
T ss_pred HHHHHHHHhhCCEEEEccHHHHHHHHHHc-CCCCcc------eEEEecCCCChhhcCCCc--------------------
Confidence 12346788999999999999999887631 133332 799999999998886542
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCC--hhHHHHHHHHHHHCCC---ceEE
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPE---KARG 360 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~--~~~~~~~~~l~~~~~~---~v~~ 360 (510)
....+++++++ .++++|+|+||+.+.||++.++++++++. ++++++++|+|+ +.+.+.+++...+++. ++.+
T Consensus 188 ~~~~~~~~~~~--~~~~~i~~~Grl~~~Kg~~~li~a~~~l~-~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~ 264 (388)
T TIGR02149 188 GNVVLDRYGID--RSRPYILFVGRITRQKGVPHLLDAVHYIP-KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIW 264 (388)
T ss_pred hHHHHHHhCCC--CCceEEEEEcccccccCHHHHHHHHHHHh-hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEE
Confidence 44567788876 35589999999999999999999999985 478999988765 3455666666555432 3665
Q ss_pred ec-cCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCH-
Q 010448 361 VA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV- 438 (510)
Q Consensus 361 ~~-~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~- 438 (510)
.+ .++.+++..+|++||++++||.+|++|++++|||+||+|||+++.||..|+++++.+|+++ +++|+
T Consensus 265 ~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~ 334 (388)
T TIGR02149 265 INKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLV----------PPDNSD 334 (388)
T ss_pred ecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEc----------CCCCCc
Confidence 54 4688888899999999999999999999999999999999999999999999999999998 78888
Q ss_pred -----HHHHHHHHHHHHhhCHHHHHHHHHHH---hhccCChHHHHHHHHHHHHHHH
Q 010448 439 -----AAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 486 (510)
Q Consensus 439 -----~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~~y~~l~ 486 (510)
++++++|.+++++ ++.+.+++.++ +.++|||+.+++++.++|++++
T Consensus 335 ~~~~~~~l~~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 335 ADGFQAELAKAINILLAD--PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred ccchHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 9999999999998 55555665554 4678999999999999999763
No 19
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=8.8e-37 Score=309.30 Aligned_cols=282 Identities=22% Similarity=0.222 Sum_probs=215.1
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| |||+|.+.+...+.++...... ..++|+|+++|+...... +.. ...
T Consensus 84 ~~d-ivh~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~h~~~~~~~---------~~~------------------~~~ 132 (371)
T cd04962 84 KLD-LLHVHYAVPHAVAAYLAREILG---KKDLPVVTTLHGTDITLV---------GQD------------------PSF 132 (371)
T ss_pred Ccc-EEeecccCCccHHHHHHHHhcC---cCCCcEEEEEcCCccccc---------ccc------------------ccc
Confidence 599 9999976554333333322111 037999999996532110 000 011
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
..+.+..++.+|.|+++|+.+.+.+.+. +.. ..++.+||||+|...+.+..
T Consensus 133 ~~~~~~~~~~~d~ii~~s~~~~~~~~~~---~~~------~~~i~vi~n~~~~~~~~~~~-------------------- 183 (371)
T cd04962 133 QPATRFSIEKSDGVTAVSESLRQETYEL---FDI------TKEIEVIPNFVDEDRFRPKP-------------------- 183 (371)
T ss_pred hHHHHHHHhhCCEEEEcCHHHHHHHHHh---cCC------cCCEEEecCCcCHhhcCCCc--------------------
Confidence 2345778899999999999999988752 111 12799999999987765532
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh-CCcEEEEEecCChhHHHHHHHHHHHCC--CceEEec
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVA 362 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~-~~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v~~~~ 362 (510)
....+++++++. +.++++++||+.+.||++.+++++.++.+ .+++++++|+|+ ..+.++++..+.+ +++.+.+
T Consensus 184 ~~~~~~~~~~~~--~~~~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g 259 (371)
T cd04962 184 DEALKRRLGAPE--GEKVLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGP--ERSPAERLARELGLQDDVLFLG 259 (371)
T ss_pred hHHHHHhcCCCC--CCeEEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCc--CHHHHHHHHHHcCCCceEEEec
Confidence 233456677653 55899999999999999999999999876 478999999987 3445666655543 4577777
Q ss_pred cCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHH
Q 010448 363 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS 442 (510)
Q Consensus 363 ~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la 442 (510)
.. +++..+|+.||++++||..|++|++++|||++|+|||+++.||..|++.++.+|+++ +++|+++++
T Consensus 260 ~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~l~ 327 (371)
T cd04962 260 KQ--DHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLV----------DVGDVEAMA 327 (371)
T ss_pred Cc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEc----------CCCCHHHHH
Confidence 44 346689999999999999999999999999999999999999999999999999998 899999999
Q ss_pred HHHHHHHHhhCHHHHHHHHHHH---hhccCChHHHHHHHHHHHHHH
Q 010448 443 TTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 485 (510)
Q Consensus 443 ~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~~y~~l 485 (510)
++|.+++++ ++.+.++++++ +.++|||+.++++|.++|+++
T Consensus 328 ~~i~~l~~~--~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 328 EYALSLLED--DELWQEFSRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 999999997 55555555554 468899999999999999863
No 20
>PLN00142 sucrose synthase
Probab=100.00 E-value=1.5e-36 Score=321.04 Aligned_cols=322 Identities=17% Similarity=0.187 Sum_probs=218.6
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| |||+|.|.+++++..++.. .++|+|.|.|.+..... .......-..... | .+ ...
T Consensus 408 ~PD-lIHaHYwdsg~vA~~La~~-------lgVP~v~T~HsL~k~K~-~~~~~~~~~~e~~----------y--~~-~~r 465 (815)
T PLN00142 408 KPD-LIIGNYSDGNLVASLLAHK-------LGVTQCTIAHALEKTKY-PDSDIYWKKFDDK----------Y--HF-SCQ 465 (815)
T ss_pred CCC-EEEECCccHHHHHHHHHHH-------hCCCEEEEcccchhhhc-cccCCcccccchh----------h--hh-hhc
Confidence 499 9999999999999999887 49999999997753111 1100000000000 0 00 011
Q ss_pred chHHHHHHHhccceeecCHHHHHHH-------hcCCCCCCc-hhhhh-----hcCCceEecCCCCCCCCCCCCcc--ccc
Q 010448 206 INWMKAGILESDMVLTVSPHYAQEL-------VSGEDKGVE-LDNII-----RKTGIKGIVNGMDVQEWNPLTDK--YIG 270 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l-------~~~~~~g~~-~~~~~-----~~~ki~vIpngvd~~~~~~~~~~--~~~ 270 (510)
+.....++..||.||+.|......+ .++..++.| ...++ ...++.+||+|+|...|.|.... ...
T Consensus 466 ~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~ 545 (815)
T PLN00142 466 FTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLT 545 (815)
T ss_pred hHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHH
Confidence 2335668889999999998776432 121111111 00000 02388999999999988764321 000
Q ss_pred cCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCC-h----h-
Q 010448 271 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-K----P- 342 (510)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~-~----~- 342 (510)
.-++. .+....+....++.+|+..++++++|+++||+.+.||++.|++|+.++.+ ++++|+|+|+|. + .
T Consensus 546 ~l~n~---I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ 622 (815)
T PLN00142 546 SLHPS---IEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDR 622 (815)
T ss_pred hhccc---chhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccH
Confidence 00000 00111122334556787555667899999999999999999999998764 479999999872 1 1
Q ss_pred -H---HHHHHHHHHHCC--CceEEeccCC----HHHHHHHHH-hCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCcc
Q 010448 343 -M---EKQLEQLEILYP--EKARGVAKFN----IPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV 411 (510)
Q Consensus 343 -~---~~~~~~l~~~~~--~~v~~~~~~~----~~~~~~~~~-~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~ 411 (510)
. .+.+.+++.+++ ++|.+.+... .+++..+++ ++|++++||.+|+||++++||||||+|||+|+.||+.
T Consensus 623 ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~ 702 (815)
T PLN00142 623 EEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPA 702 (815)
T ss_pred HHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHH
Confidence 1 134566666654 4677665432 233434555 5799999999999999999999999999999999999
Q ss_pred ceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHh--hCHHHHHHHHHHH---hhccCChHHHHHHHHHHH
Q 010448 412 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNG---MAQDLSWKGPAKKWEETL 482 (510)
Q Consensus 412 e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~--~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~~y 482 (510)
|+|.++.+|+++ +|.|+++++++|.++++. .+++.+.++++++ +.++|||+.+++++.++.
T Consensus 703 EIV~dG~tG~LV----------~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 703 EIIVDGVSGFHI----------DPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999998 999999999999876631 1267777777766 457899999999998865
No 21
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=3.4e-36 Score=307.74 Aligned_cols=227 Identities=15% Similarity=0.173 Sum_probs=180.6
Q ss_pred HHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHH
Q 010448 210 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 289 (510)
Q Consensus 210 ~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (510)
...++.+|.+|++|+..++.+.+. + ..++.+||||+|.+.|.+.... ....
T Consensus 151 ~~~~~~ad~vi~~s~~~~~~~~~~--~---------~~ki~vI~ngvd~~~f~~~~~~------------------~~~~ 201 (396)
T cd03818 151 LLALAQADAGVSPTRWQRSTFPAE--L---------RSRISVIHDGIDTDRLRPDPQA------------------RLRL 201 (396)
T ss_pred HHHHHhCCEEECCCHHHHhhCcHh--h---------ccceEEeCCCccccccCCCchh------------------hhcc
Confidence 457889999999999999987642 1 1289999999999988764320 1111
Q ss_pred HHHhCCCCCCCCcEEEEecC-cccccChhhHHHHHHhhhh--CCcEEEEEecCCh-----------hHHHHHHHHHHHC-
Q 010448 290 QAEVGLPVDRNIPVIGFIGR-LEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-----------PMEKQLEQLEILY- 354 (510)
Q Consensus 290 ~~~~g~~~~~~~~~i~~~Gr-l~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~-----------~~~~~~~~l~~~~- 354 (510)
+...++. ++.++|+|+|| +.+.||++.+++|+.++.+ ++++|+|+|++.. ..+..++++....
T Consensus 202 ~~~~~~~--~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 279 (396)
T cd03818 202 PNGRVLT--PGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLD 279 (396)
T ss_pred cccccCC--CCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccC
Confidence 1112222 35579999998 9999999999999999875 6999999997421 1223344444321
Q ss_pred CCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCC
Q 010448 355 PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 434 (510)
Q Consensus 355 ~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~ 434 (510)
.++|.+.+..+.+++..+|+.||++++||..|++|++++||||||+|||+|+.||..|++.++.+|+++ +
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv----------~ 349 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLV----------D 349 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEc----------C
Confidence 246889998898888899999999999999999999999999999999999999999999999999998 8
Q ss_pred ccCHHHHHHHHHHHHHhhCHHHHHHHHHHH---hhccCChHHHHHHHH
Q 010448 435 PVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWE 479 (510)
Q Consensus 435 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~ 479 (510)
+.|+++++++|.+++++ ++.+.++++++ +.++|||+.++++|.
T Consensus 350 ~~d~~~la~~i~~ll~~--~~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 350 FFDPDALAAAVIELLDD--PARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 99999999999999998 44555555444 567899999999886
No 22
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=1.2e-35 Score=310.62 Aligned_cols=421 Identities=18% Similarity=0.229 Sum_probs=317.2
Q ss_pred EEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCCC-cccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCC
Q 010448 39 VIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQS-KIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNS 117 (510)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~~-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (510)
.+.+.+.++....+.++...+++++++++++......+.|... .+|+.. ...+..++.+|+.+.++.++.++.
T Consensus 87 ~~~v~i~g~~~~~rlw~~~~~~v~lylld~~~~~n~~~~R~it~~LY~~D----~~~R~~Qe~fl~~a~l~~l~~l~~-- 160 (601)
T TIGR02094 87 KISVRIRGRDVYAKVWRVQVGRVPLYLLDTNIPENSEDDRWITGRLYGGD----KEMRIAQEIVLGIGGVRALRALGI-- 160 (601)
T ss_pred EEEEecCCcEEEEEEEEEEeCCCCEEEecCCCcccchhhcCccCCCCCCC----HHHHHHHHHHHHHHHHHHHHHcCC--
Confidence 3567777777788888888899999999987522223333322 467521 233455559999999999988764
Q ss_pred CCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCC-------CCCCcEEEEecCCCcccc--cCccchh--------h
Q 010448 118 NKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM-------YKSAKVVFCIHNIAYQGR--FAFEDFG--------L 180 (510)
Q Consensus 118 ~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~-------~~~~~~V~tiH~~~~~~~--~~~~~~~--------~ 180 (510)
+|| |||+||||+++++..+.+.....+. ..+.++|||+|++.++|. ||...+. .
T Consensus 161 --------~pd-viH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~ 231 (601)
T TIGR02094 161 --------DPD-VYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAAN 231 (601)
T ss_pred --------Cce-EEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhH
Confidence 499 9999999999999886432110000 025789999999999997 8876663 2
Q ss_pred cCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhc---CCCCCCchhhhhhcCCceEecCCCC
Q 010448 181 LNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVS---GEDKGVELDNIIRKTGIKGIVNGMD 257 (510)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~---~~~~g~~~~~~~~~~ki~vIpngvd 257 (510)
++++...+...... .+-....+++++.++..||.|.+||+.+.+.... ....+.+. +..++.-|.||||
T Consensus 232 ~gl~~~~~~~~~~~----~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~~----~~~~i~gItNGId 303 (601)
T TIGR02094 232 LGLPREQLLALGRE----NPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGYEE----EEVPIGYVTNGVH 303 (601)
T ss_pred hCCCHHHHHhhhhh----ccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhccc----ccCCccceeCCcc
Confidence 46665544322211 0000145789999999999999999988883332 11011111 1236899999999
Q ss_pred CCCCCCCCccccccCCCcCC---------------------hhhchHHHHHHHHH---------------------HhCC
Q 010448 258 VQEWNPLTDKYIGVKYDAST---------------------VMDAKPLLKEALQA---------------------EVGL 295 (510)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~---------------------~~g~ 295 (510)
...|.|.....+..+|+.++ +++.|..+|..+.+ .+|+
T Consensus 304 ~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl 383 (601)
T TIGR02094 304 NPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDR 383 (601)
T ss_pred ccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhcc
Confidence 99999988888888887655 45778888877766 4666
Q ss_pred CCCCCCcEEEEecCcccccChhhHHHHHHhhhh------CCcEEEEEecCChh------HHHHHHHHHHH--CCCceEEe
Q 010448 296 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKP------MEKQLEQLEIL--YPEKARGV 361 (510)
Q Consensus 296 ~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~------~~~~l~i~G~g~~~------~~~~~~~l~~~--~~~~v~~~ 361 (510)
+.+++.+++++++|+.++||+++++.++.++.+ .+++|+++|+|.+. +.+.+.+++.+ ++++|.+.
T Consensus 384 ~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~ 463 (601)
T TIGR02094 384 FLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFL 463 (601)
T ss_pred ccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEE
Confidence 677888999999999999999999999888863 47999999999854 88889999887 77899999
Q ss_pred ccCCHHHHHHHHHhCcEEEe-CCC-CCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEecc--ccccCCCCCccC
Q 010448 362 AKFNIPLAHMIIAGADFILI-PSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS--FSVDCEAVDPVD 437 (510)
Q Consensus 362 ~~~~~~~~~~~~~~adv~v~-ps~-~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~--~~~~~~~~~~~d 437 (510)
..|+....+.++++||++++ ||+ +|+||++-+-||..|.+.+++..|...|.. +++|||.|+. -..+...-+..|
T Consensus 464 ~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~~~d~~d 542 (601)
T TIGR02094 464 ENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEEEQDRLD 542 (601)
T ss_pred cCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccccccccccCCC
Confidence 99999999999999999999 999 899999999999999999999988888876 6789999941 000111113589
Q ss_pred HHHHHHHHHHHH-Hhh-C------HHHHHHHHHHHhhc---cCChHHHHHHHHHHHH
Q 010448 438 VAAVSTTVRRAL-ATY-G------TQALAEMMKNGMAQ---DLSWKGPAKKWEETLL 483 (510)
Q Consensus 438 ~~~la~~i~~ll-~~~-~------~~~~~~~~~~~~~~---~fs~~~~~~~~~~~y~ 483 (510)
+++|.++|.+.+ ..+ + +..+.++.++++.. .|||++++++|.++|.
T Consensus 543 a~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy 599 (601)
T TIGR02094 543 AEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY 599 (601)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence 999999997766 332 1 34688999999876 7999999999999873
No 23
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=7.2e-36 Score=303.20 Aligned_cols=231 Identities=20% Similarity=0.221 Sum_probs=184.3
Q ss_pred HHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHH
Q 010448 212 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 291 (510)
Q Consensus 212 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (510)
..+.+|.++++|+...+.+.+. +|++.+ ++.+||||+|.+.|.+.... ....++
T Consensus 133 ~~~~~~~~i~vs~~~~~~~~~~--~~~~~~------~~~vi~ngvd~~~~~~~~~~------------------~~~~~~ 186 (374)
T TIGR03088 133 YRPLIHHYVAVSRDLEDWLRGP--VKVPPA------KIHQIYNGVDTERFHPSRGD------------------RSPILP 186 (374)
T ss_pred HHhcCCeEEEeCHHHHHHHHHh--cCCChh------hEEEeccCccccccCCCccc------------------hhhhhH
Confidence 4457899999999999988753 455543 89999999999888664310 112222
Q ss_pred HhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh------CCcEEEEEecCChhHHHHHHHHHHHCC--CceEEecc
Q 010448 292 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAK 363 (510)
Q Consensus 292 ~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~------~~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v~~~~~ 363 (510)
....+ +++++|+++||+.+.||++.+++|+.++.+ ++++|+++|+|+ ..+.++++..+.+ ..+.+.+
T Consensus 187 ~~~~~--~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g- 261 (374)
T TIGR03088 187 PDFFA--DESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGP--ARGACEQMVRAAGLAHLVWLPG- 261 (374)
T ss_pred hhcCC--CCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCc--hHHHHHHHHHHcCCcceEEEcC-
Confidence 22222 356899999999999999999999998864 268999999987 4456677666554 2354444
Q ss_pred CCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHH
Q 010448 364 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 443 (510)
Q Consensus 364 ~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~ 443 (510)
. .+++..+|++||++++||..|+||++++|||+||+|||+|+.||..|++.++.+|+++ +++|++++++
T Consensus 262 ~-~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~----------~~~d~~~la~ 330 (374)
T TIGR03088 262 E-RDDVPALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALV----------PPGDAVALAR 330 (374)
T ss_pred C-cCCHHHHHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEe----------CCCCHHHHHH
Confidence 3 3456689999999999999999999999999999999999999999999999999998 8999999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHH---hhccCChHHHHHHHHHHHHHHH
Q 010448 444 TVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 486 (510)
Q Consensus 444 ~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~~y~~l~ 486 (510)
+|.+++++ ++.+.++++++ +.++|||+.++++|.++|++++
T Consensus 331 ~i~~l~~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~ 374 (374)
T TIGR03088 331 ALQPYVSD--PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQLL 374 (374)
T ss_pred HHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Confidence 99999987 55555555444 5689999999999999998763
No 24
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=2e-35 Score=302.13 Aligned_cols=363 Identities=22% Similarity=0.280 Sum_probs=254.7
Q ss_pred chhhhhHHHHHHHCCCcEEEEeeCCCCcccccCCcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCCCc
Q 010448 3 NASSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSK 82 (510)
Q Consensus 3 ~~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~~~ 82 (510)
+.++..|+++|+++||+|+|++......... .....+|++++.++......
T Consensus 24 ~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~--------- 74 (398)
T cd03800 24 NVYVLELARALARLGHEVDIFTRRIDDALPP--------------------IVELAPGVRVVRVPAGPAEY--------- 74 (398)
T ss_pred eehHHHHHHHHhccCceEEEEEecCCcccCC--------------------ccccccceEEEecccccccC---------
Confidence 3467899999999999999999753321100 01223577777664322110
Q ss_pred ccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEE
Q 010448 83 IYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 162 (510)
Q Consensus 83 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~ 162 (510)
+. . ......+..+...+...++.... +|| +||+|.+....++..+++. .++|+|+
T Consensus 75 -~~---~---~~~~~~~~~~~~~~~~~~~~~~~----------~~D-iv~~~~~~~~~~~~~~~~~-------~~~~~i~ 129 (398)
T cd03800 75 -LP---K---EELWPYLDEFADDLLRFLRREGG----------RPD-LIHAHYWDSGLVALLLARR-------LGIPLVH 129 (398)
T ss_pred -CC---h---hhcchhHHHHHHHHHHHHHhcCC----------Ccc-EEEEecCccchHHHHHHhh-------cCCceEE
Confidence 00 0 00001112233344444443311 499 9999988777766666554 4899999
Q ss_pred EecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhh
Q 010448 163 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN 242 (510)
Q Consensus 163 tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~ 242 (510)
+.|+......... ..... ..........+..++.+|.++++|+...+.+.+. ++.+
T Consensus 130 ~~h~~~~~~~~~~------~~~~~-------------~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~--~~~~--- 185 (398)
T cd03800 130 TFHSLGAVKRRHL------GAADT-------------YEPARRIEAEERLLRAADRVIASTPQEAEELYSL--YGAY--- 185 (398)
T ss_pred EeecccccCCccc------ccccc-------------cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH--cccc---
Confidence 9996543111000 00000 0001112345678899999999999998888762 2222
Q ss_pred hhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHH
Q 010448 243 IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAA 322 (510)
Q Consensus 243 ~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a 322 (510)
..++.+||||+|.+.|.+... ....++.++.+ .++++|+|+||+.+.||++.++++
T Consensus 186 ---~~~~~vi~ng~~~~~~~~~~~-------------------~~~~~~~~~~~--~~~~~i~~~gr~~~~k~~~~ll~a 241 (398)
T cd03800 186 ---PRRIRVVPPGVDLERFTPYGR-------------------AEARRARLLRD--PDKPRILAVGRLDPRKGIDTLIRA 241 (398)
T ss_pred ---ccccEEECCCCCccceecccc-------------------hhhHHHhhccC--CCCcEEEEEcccccccCHHHHHHH
Confidence 226899999999888765432 11113444444 356899999999999999999999
Q ss_pred HHhhhh--CCcEEEEEecCChh----HHHHHHHHHHHCC--CceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHH
Q 010448 323 IPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLH 394 (510)
Q Consensus 323 ~~~l~~--~~~~l~i~G~g~~~----~~~~~~~l~~~~~--~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~E 394 (510)
+..+.+ ++++|+++|++... ....++.+....+ +++.+.+..+.+++..+++.||++++||..|++|++++|
T Consensus 242 ~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~E 321 (398)
T cd03800 242 YAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALE 321 (398)
T ss_pred HHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHHH
Confidence 999975 58999999987632 2233455555443 468888888888888999999999999999999999999
Q ss_pred HHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHH---hhccCCh
Q 010448 395 AMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSW 471 (510)
Q Consensus 395 ama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~ 471 (510)
||+||+|||+++.+|..|++.++.+|+++ ++.|+++++++|.+++++ ++.+.++++++ +.++|||
T Consensus 322 a~a~G~Pvi~s~~~~~~e~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~ 389 (398)
T cd03800 322 AMACGLPVVATAVGGPRDIVVDGVTGLLV----------DPRDPEALAAALRRLLTD--PALRRRLSRAGLRRARARYTW 389 (398)
T ss_pred HHhcCCCEEECCCCCHHHHccCCCCeEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhCCH
Confidence 99999999999999999999999999998 889999999999999998 66666666655 4589999
Q ss_pred HHHHHHHH
Q 010448 472 KGPAKKWE 479 (510)
Q Consensus 472 ~~~~~~~~ 479 (510)
+.++++|.
T Consensus 390 ~~~~~~~~ 397 (398)
T cd03800 390 ERVAARLL 397 (398)
T ss_pred HHHHHHHh
Confidence 99999886
No 25
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=2.9e-34 Score=288.83 Aligned_cols=268 Identities=23% Similarity=0.283 Sum_probs=205.1
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| +||+|.....+...++... .++|+|+++|+.....
T Consensus 78 ~~d-ii~~~~~~~~~~~~~~~~~-------~~~~~i~~~h~~~~~~---------------------------------- 115 (355)
T cd03819 78 KVD-IVHARSRAPAWSAYLAARR-------TRPPFVTTVHGFYSVN---------------------------------- 115 (355)
T ss_pred CCC-EEEECCCchhHHHHHHHHh-------cCCCEEEEeCCchhhH----------------------------------
Confidence 599 9999987666555554433 4899999999533200
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
.+.+..++.+|.++++|+...+.+.+. ++++.+ ++.+||||+|...|.+... ....
T Consensus 116 -~~~~~~~~~~~~vi~~s~~~~~~~~~~--~~~~~~------k~~~i~ngi~~~~~~~~~~---------------~~~~ 171 (355)
T cd03819 116 -FRYNAIMARGDRVIAVSNFIADHIREN--YGVDPD------RIRVIPRGVDLDRFDPGAV---------------PPER 171 (355)
T ss_pred -HHHHHHHHhcCEEEEeCHHHHHHHHHh--cCCChh------hEEEecCCccccccCcccc---------------chHH
Confidence 034556778999999999999998842 555544 8999999999988765431 0111
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCCh--hHHHHHHHHHHHCC--CceE
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYP--EKAR 359 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~--~~~~~~~~l~~~~~--~~v~ 359 (510)
...++++++.+ ++.++++|+||+.+.||++.+++++..+.+ ++++++++|.++. .+.+.+.+.+.+.+ ++|.
T Consensus 172 ~~~~~~~~~~~--~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~ 249 (355)
T cd03819 172 ILALAREWPLP--KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVT 249 (355)
T ss_pred HHHHHHHcCCC--CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEE
Confidence 22356677765 355899999999999999999999999987 6899999998863 34455555555543 4577
Q ss_pred EeccCCHHHHHHHHHhCcEEEeCC-CCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCH
Q 010448 360 GVAKFNIPLAHMIIAGADFILIPS-RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV 438 (510)
Q Consensus 360 ~~~~~~~~~~~~~~~~adv~v~ps-~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~ 438 (510)
+.+. .+++..+|++||++++|| ..|++|++++|||+||+|||+++.||..|++.++.+|+++ +++|+
T Consensus 250 ~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~ 317 (355)
T cd03819 250 FVGH--CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLV----------PPGDA 317 (355)
T ss_pred EcCC--cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEe----------CCCCH
Confidence 7665 445668999999999999 7899999999999999999999999999999999999998 89999
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHH---HhhccCChHHH
Q 010448 439 AAVSTTVRRALATYGTQALAEMMKN---GMAQDLSWKGP 474 (510)
Q Consensus 439 ~~la~~i~~ll~~~~~~~~~~~~~~---~~~~~fs~~~~ 474 (510)
++++++|..++... ++.+.+++++ .+.++|||+.+
T Consensus 318 ~~l~~~i~~~~~~~-~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 318 EALAQALDQILSLL-PEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred HHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHhhhhccC
Confidence 99999997666531 4455555544 46789999864
No 26
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=3.5e-34 Score=289.82 Aligned_cols=272 Identities=22% Similarity=0.278 Sum_probs=213.1
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| |||+|....+.....+.+. .++|+|++.|+......... .... . +...
T Consensus 82 ~~d-vvh~~~~~~~~~~~~~~~~-------~~~p~i~~~h~~~~~~~~~~---~~~~-~-----------------~~~~ 132 (367)
T cd05844 82 RPD-LVHAHFGFDGVYALPLARR-------LGVPLVVTFHGFDATTSLAL---LLRS-R-----------------WALY 132 (367)
T ss_pred CCC-EEEeccCchHHHHHHHHHH-------cCCCEEEEEeCccccccchh---hccc-c-----------------hhHH
Confidence 599 9999966554444444433 48999999996432111000 0000 0 0011
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
..+.+..++.+|.++++|+.+++.+.+ .|.+.+ ++.++|||+|.+.+.+...
T Consensus 133 ~~~~~~~~~~~d~ii~~s~~~~~~~~~---~~~~~~------~i~vi~~g~d~~~~~~~~~------------------- 184 (367)
T cd05844 133 ARRRRRLARRAALFIAVSQFIRDRLLA---LGFPPE------KVHVHPIGVDTAKFTPATP------------------- 184 (367)
T ss_pred HHHHHHHHHhcCEEEECCHHHHHHHHH---cCCCHH------HeEEecCCCCHHhcCCCCC-------------------
Confidence 233466788999999999999999986 466544 7999999999887765321
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHC--CCceEEe
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGV 361 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~--~~~v~~~ 361 (510)
..+.++++|+|++.+.||++.+++|+..+.+ ++++|+++|+|+ ..+.+++++.+. ..++.+.
T Consensus 185 ------------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~ 250 (367)
T cd05844 185 ------------ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGP--LLAALEALARALGLGGRVTFL 250 (367)
T ss_pred ------------CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCch--HHHHHHHHHHHcCCCCeEEEC
Confidence 1245799999999999999999999999975 589999999987 556677777763 4578888
Q ss_pred ccCCHHHHHHHHHhCcEEEeCCC------CCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCc
Q 010448 362 AKFNIPLAHMIIAGADFILIPSR------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 435 (510)
Q Consensus 362 ~~~~~~~~~~~~~~adv~v~ps~------~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~ 435 (510)
+..+.+++..+|+.||++++||. .|++|++++|||+||+|||+++.+|..|++.++.+|+++ ++
T Consensus 251 g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~----------~~ 320 (367)
T cd05844 251 GAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLV----------PE 320 (367)
T ss_pred CCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEE----------CC
Confidence 88888888899999999999997 499999999999999999999999999999999999998 88
Q ss_pred cCHHHHHHHHHHHHHhhCHHHHHHHHHHH---hhccCChHHHHHHHHH
Q 010448 436 VDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEE 480 (510)
Q Consensus 436 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~ 480 (510)
.|+++++++|.+++++ ++.+.+++.++ +.++|||+.+++++.+
T Consensus 321 ~d~~~l~~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 321 GDVAALAAALGRLLAD--PDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999998 55555555444 5689999999999875
No 27
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=2.3e-34 Score=293.94 Aligned_cols=229 Identities=16% Similarity=0.189 Sum_probs=181.8
Q ss_pred HHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHH
Q 010448 208 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 287 (510)
Q Consensus 208 ~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (510)
+.+..++.+|.|+++|+..++.+.+..+ ..+ ..++.+|+||+|.+.|.+.... .
T Consensus 147 ~e~~~~~~ad~ii~~s~~~~~~~~~~~~-~~~------~~~~~vi~n~vd~~~~~~~~~~-------------------~ 200 (392)
T cd03805 147 LEEFTTGMADKIVVNSNFTASVFKKTFP-SLA------KNPREVVYPCVDTDSFESTSED-------------------P 200 (392)
T ss_pred HHHHHhhCceEEEEcChhHHHHHHHHhc-ccc------cCCcceeCCCcCHHHcCccccc-------------------c
Confidence 3466788999999999999998875311 111 1134699999999888664320 0
Q ss_pred HHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh-----CCcEEEEEecCCh------hHHHHHHHHHHH-C-
Q 010448 288 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-----ENVQIIVLGTGKK------PMEKQLEQLEIL-Y- 354 (510)
Q Consensus 288 ~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~-----~~~~l~i~G~g~~------~~~~~~~~l~~~-~- 354 (510)
.++....+ .+.++++++||+.+.||++.+++++.++.+ ++++|+++|+|+. .+.+.+++++.+ .
T Consensus 201 -~~~~~~~~--~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~ 277 (392)
T cd03805 201 -DPGLLIPK--SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLL 277 (392)
T ss_pred -cccccccC--CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcC
Confidence 11112222 356899999999999999999999999975 3899999998763 234667777666 3
Q ss_pred -CCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCC
Q 010448 355 -PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 433 (510)
Q Consensus 355 -~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~ 433 (510)
.++|.+.+..+.+++..+|+.||++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++
T Consensus 278 l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~---------- 347 (392)
T cd03805 278 LEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLC---------- 347 (392)
T ss_pred CCceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEe----------
Confidence 357999999999988899999999999999999999999999999999999999999999999999987
Q ss_pred CccCHHHHHHHHHHHHHhhCHHHHHHHHHHH---hhccCChHHHHHHH
Q 010448 434 DPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKW 478 (510)
Q Consensus 434 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~ 478 (510)
++ |+++++++|.+++++ ++...++++++ +.++|||+.+++++
T Consensus 348 ~~-~~~~~a~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 348 EP-TPEEFAEAMLKLAND--PDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred CC-CHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 55 899999999999998 44555555554 57899999998763
No 28
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=2.1e-35 Score=275.24 Aligned_cols=351 Identities=19% Similarity=0.249 Sum_probs=253.7
Q ss_pred chhhhhHHHHHHHCCCcEEEEeeCCCCcccccCCcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCCCc
Q 010448 3 NASSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSK 82 (510)
Q Consensus 3 ~~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~~~ 82 (510)
+..+..|++.|-++||+|.|+|-.|++.. ++++. -+|++||+++....+.+
T Consensus 18 eshiy~lSq~li~lghkVvvithayg~r~------------------giryl---t~glkVyylp~~v~~n~-------- 68 (426)
T KOG1111|consen 18 ESHIYALSQCLIRLGHKVVVITHAYGNRV------------------GIRYL---TNGLKVYYLPAVVGYNQ-------- 68 (426)
T ss_pred hhhHHHhhcchhhcCCeEEEEeccccCcc------------------ceeee---cCCceEEEEeeeeeecc--------
Confidence 34567899999999999999999998553 22333 37899999965443321
Q ss_pred ccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEE
Q 010448 83 IYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 162 (510)
Q Consensus 83 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~ 162 (510)
.. +++-+..+..+-... +++ +.. |+|.|...+.++--.+..... .|.+.|+
T Consensus 69 ----tT---~ptv~~~~Pllr~i~---lrE-------------~I~-ivhghs~fS~lahe~l~hart-----MGlktVf 119 (426)
T KOG1111|consen 69 ----TT---FPTVFSDFPLLRPIL---LRE-------------RIE-IVHGHSPFSYLAHEALMHART-----MGLKTVF 119 (426)
T ss_pred ----cc---hhhhhccCcccchhh---hhh-------------ceE-EEecCChHHHHHHHHHHHHHh-----cCceEEE
Confidence 00 111111111111111 111 367 999997766666444443322 5899999
Q ss_pred EecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhh
Q 010448 163 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN 242 (510)
Q Consensus 163 tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~ 242 (510)
|-|++. ...++...-. ..++...+.+.|++||+|...++...=+ ..++++
T Consensus 120 TdHSlf-----Gfad~~si~~----------------------n~ll~~sL~~id~~IcVshtskentvlr--~~L~p~- 169 (426)
T KOG1111|consen 120 TDHSLF-----GFADIGSILT----------------------NKLLPLSLANIDRIICVSHTSKENTVLR--GALAPA- 169 (426)
T ss_pred eccccc-----cccchhhhhh----------------------cceeeeeecCCCcEEEEeecCCCceEEE--eccCHh-
Confidence 999643 1111111100 1234556778999999999888765421 334444
Q ss_pred hhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHH
Q 010448 243 IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAA 322 (510)
Q Consensus 243 ~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a 322 (510)
++.+|||.+++..|.|.... . ...+..+|+.++|+.++||+|.++++
T Consensus 170 -----kvsvIPnAv~~~~f~P~~~~---------------------------~-~S~~i~~ivv~sRLvyrKGiDll~~i 216 (426)
T KOG1111|consen 170 -----KVSVIPNAVVTHTFTPDAAD---------------------------K-PSADIITIVVASRLVYRKGIDLLLEI 216 (426)
T ss_pred -----HeeeccceeeccccccCccc---------------------------c-CCCCeeEEEEEeeeeeccchHHHHHH
Confidence 99999999999999985421 1 11234799999999999999999999
Q ss_pred HHhhhh--CCcEEEEEecCCh--hHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHh
Q 010448 323 IPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY 398 (510)
Q Consensus 323 ~~~l~~--~~~~l~i~G~g~~--~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~ 398 (510)
+.++.+ ++++|+|+|+|+. .+++.+++...+ +++.+.+.++.+...+.|.+.|+|+.||..|+|+++++|||+|
T Consensus 217 Ip~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l~--~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaSc 294 (426)
T KOG1111|consen 217 IPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFLQ--DRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASC 294 (426)
T ss_pred HHHHHhcCCCeeEEEecCCcccchHHHHHHHhhcc--CceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhC
Confidence 999987 7999999999983 456666665443 6799999999999999999999999999999999999999999
Q ss_pred CCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHHhhccCChHHHHHHH
Q 010448 399 GTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKW 478 (510)
Q Consensus 399 G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fs~~~~~~~~ 478 (510)
|.|||++++||++|++.++ . ... .+.+++++++++.+++..... .-....+.+.+.|+|+.++++.
T Consensus 295 GL~VVsTrVGGIpeVLP~d-~-i~~----------~~~~~~dl~~~v~~ai~~~~~--~p~~~h~~v~~~y~w~dVa~rT 360 (426)
T KOG1111|consen 295 GLPVVSTRVGGIPEVLPED-M-ITL----------GEPGPDDLVGAVEKAITKLRT--LPLEFHDRVKKMYSWKDVAERT 360 (426)
T ss_pred CCEEEEeecCCccccCCcc-c-eec----------cCCChHHHHHHHHHHHHHhcc--CchhHHHHHHHhccHHHHHHHH
Confidence 9999999999999999875 2 222 677899999999999886321 1122234566789999999999
Q ss_pred HHHHHHHHHcCC
Q 010448 479 EETLLNLEVAGS 490 (510)
Q Consensus 479 ~~~y~~l~~~~~ 490 (510)
+++|.++.....
T Consensus 361 ekvy~r~~~t~~ 372 (426)
T KOG1111|consen 361 EKVYDRAATTSI 372 (426)
T ss_pred HHHHHHHhhccC
Confidence 999999987643
No 29
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=7.5e-34 Score=288.12 Aligned_cols=275 Identities=18% Similarity=0.175 Sum_probs=202.4
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| |||+|++.+..++...+. .++|+|+++|+..... . ...
T Consensus 85 ~~D-vv~~h~~~~~~~~~~~~~--------~~~~~i~~~H~~~~~~--~----------------------------~~~ 125 (372)
T cd03792 85 DAD-VVVIHDPQPLALPLFKKK--------RGRPWIWRCHIDLSSP--N----------------------------RRV 125 (372)
T ss_pred CCC-EEEECCCCchhHHHhhhc--------CCCeEEEEeeeecCCC--c----------------------------HHH
Confidence 599 999998775333222211 3789999999532100 0 011
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCC-CCCCCccccccCCCcCChhhchHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQE-WNPLTDKYIGVKYDASTVMDAKPL 284 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 284 (510)
..+++..++.+|.+++.|.... . .+++. .++ +||||+|... +.... .+.
T Consensus 126 ~~~~~~~~~~~d~~i~~~~~~~----~---~~~~~------~~~-vipngvd~~~~~~~~~----------------~~~ 175 (372)
T cd03792 126 WDFLQPYIEDYDAAVFHLPEYV----P---PQVPP------RKV-IIPPSIDPLSGKNREL----------------SPA 175 (372)
T ss_pred HHHHHHHHHhCCEEeecHHHhc----C---CCCCC------ceE-EeCCCCCCCccccCCC----------------CHH
Confidence 2345677888999999884322 2 23322 144 9999999653 21111 112
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCCh---hHHHHHHHHHHH--CCCc
Q 010448 285 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEIL--YPEK 357 (510)
Q Consensus 285 ~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~---~~~~~~~~l~~~--~~~~ 357 (510)
.....++++|++. ++++|+++||+.+.||++.+++|+..+.+ ++++|+++|+|+. ...+.++++... ...+
T Consensus 176 ~~~~~~~~~~~~~--~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 176 DIEYILEKYGIDP--ERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPD 253 (372)
T ss_pred HHHHHHHHhCCCC--CCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCC
Confidence 2445677888763 56899999999999999999999998875 5899999999862 223334444422 2345
Q ss_pred eEEeccC--CHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCc
Q 010448 358 ARGVAKF--NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 435 (510)
Q Consensus 358 v~~~~~~--~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~ 435 (510)
+.+.+.. +.+++..+|++||++++||.+|+||++++|||+||+|||+|+.+|..+++.++.+|+++ +
T Consensus 254 v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~----------~- 322 (372)
T cd03792 254 IHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLV----------D- 322 (372)
T ss_pred eEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEe----------C-
Confidence 7776655 77888899999999999999999999999999999999999999999999999999986 3
Q ss_pred cCHHHHHHHHHHHHHhhCHHHHHHHHHHH---hhccCChHHHHHHHHHHHHHH
Q 010448 436 VDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 485 (510)
Q Consensus 436 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~~y~~l 485 (510)
+.++++++|.+++++ ++.+.++++++ +.++|||+.++++|.++|+.+
T Consensus 323 -~~~~~a~~i~~ll~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 323 -TVEEAAVRILYLLRD--PELRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred -CcHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 567889999999987 56666666655 467899999999999999863
No 30
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=2.7e-33 Score=287.20 Aligned_cols=282 Identities=14% Similarity=0.099 Sum_probs=195.5
Q ss_pred CCCeEEEeccchh---hhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCC
Q 010448 126 GEDVVFVANDWHT---SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR 202 (510)
Q Consensus 126 ~pD~iih~h~~~~---~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (510)
+|| +||+|.... ..++.++++. .++|+|+++|+..+. ... .. .+....+ .
T Consensus 95 ~~D-vi~~~~~~~~~~~~~a~~~~~~-------~~~~~V~~~h~~~~~-~~~---~~-~~~~~~~--------------~ 147 (415)
T cd03816 95 PAD-YILIQNPPSIPTLLIAWLYCLL-------RRTKLIIDWHNYGYT-ILA---LK-LGENHPL--------------V 147 (415)
T ss_pred CCC-EEEEeCCCCchHHHHHHHHHHH-------hCCeEEEEcCCchHH-HHh---cc-cCCCCHH--------------H
Confidence 599 999986443 2223333433 489999999964320 000 00 0000000 0
Q ss_pred CCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhch
Q 010448 203 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 282 (510)
Q Consensus 203 ~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (510)
.....+.+..++.||.|+++|+.+++.+.+ +|.+.+ ++.+||||. ...|.|....
T Consensus 148 ~~~~~~e~~~~~~ad~ii~vS~~~~~~l~~---~~~~~~------ki~vI~Ng~-~~~f~p~~~~--------------- 202 (415)
T cd03816 148 RLAKWYEKLFGRLADYNLCVTKAMKEDLQQ---FNNWKI------RATVLYDRP-PEQFRPLPLE--------------- 202 (415)
T ss_pred HHHHHHHHHHhhcCCEeeecCHHHHHHHHh---hhccCC------CeeecCCCC-HHHceeCcHH---------------
Confidence 011123466778899999999999999986 455544 899999995 4556554310
Q ss_pred HHHHHHHHH-------------HhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--------CCcEEEEEecCCh
Q 010448 283 PLLKEALQA-------------EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--------ENVQIIVLGTGKK 341 (510)
Q Consensus 283 ~~~~~~~~~-------------~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--------~~~~l~i~G~g~~ 341 (510)
.....+.+ ..++.. ++..+++++||+.+.||++.+++|+..+.+ ++++|+|+|+|+
T Consensus 203 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~- 279 (415)
T cd03816 203 -EKHELFLKLAKTFLTRELRIGAVQLSE-ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP- 279 (415)
T ss_pred -HHHHHHHhccccccccccccccceecC-CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc-
Confidence 00111110 112221 234678899999999999999999999864 479999999998
Q ss_pred hHHHHHHHHHHHCCC-ceEEec-cCCHHHHHHHHHhCcEEEeCCC---CCCccHHHHHHHHhCCCcEEecCCCccceEEc
Q 010448 342 PMEKQLEQLEILYPE-KARGVA-KFNIPLAHMIIAGADFILIPSR---FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 416 (510)
Q Consensus 342 ~~~~~~~~l~~~~~~-~v~~~~-~~~~~~~~~~~~~adv~v~ps~---~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~ 416 (510)
.++.+++++.+++. ++.++. .++.+++..+|++||++++|+. .|++|++++||||||+|||+++.||..|++++
T Consensus 280 -~~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~ 358 (415)
T cd03816 280 -LKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKH 358 (415)
T ss_pred -cHHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcC
Confidence 56667777766553 466654 4688888899999999997543 37899999999999999999999999999999
Q ss_pred CCceeEeccccccCCCCCccCHHHHHHHHHHHHHhh-CHHHHHHHHHHHh-hccCChHHHH
Q 010448 417 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGM-AQDLSWKGPA 475 (510)
Q Consensus 417 ~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~-~~~~~~~~~~~~~-~~~fs~~~~~ 475 (510)
+.+|+++ + |+++++++|.++++++ .++.+.+|++++. ..+++|+...
T Consensus 359 ~~~G~lv----------~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~~~~~~~ 407 (415)
T cd03816 359 GENGLVF----------G--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESELRWDENW 407 (415)
T ss_pred CCCEEEE----------C--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhcCHHHHH
Confidence 9999987 3 8999999999999972 1566777777764 2355665543
No 31
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=4.7e-34 Score=297.68 Aligned_cols=286 Identities=18% Similarity=0.208 Sum_probs=215.1
Q ss_pred CCCeEEEeccch-hhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCC
Q 010448 126 GEDVVFVANDWH-TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 204 (510)
Q Consensus 126 ~pD~iih~h~~~-~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (510)
++| |||+|... .++++.+++.. .++|+|+|.|+.....+... ..........+. ..+.+
T Consensus 173 ~~d-viH~~s~~~~g~~~~~~~~~-------~~~p~I~t~Hg~~~~e~~~~-~~~~~~~~~~~~-----------~~~~~ 232 (475)
T cd03813 173 KAD-VYHAVSTGYAGLLGALAKAR-------RGTPFLLTEHGIYTRERKIE-LLQADWEMSYFR-----------RLWIR 232 (475)
T ss_pred CCC-EEeccCcchHHHHHHHHHHH-------hCCCEEEecCCccHHHHHHH-HHhcccchHHHH-----------HHHHH
Confidence 589 99999643 34455555544 48999999996432111000 000000000000 00001
Q ss_pred -cchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchH
Q 010448 205 -KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 283 (510)
Q Consensus 205 -~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (510)
...+.+..++.||.|+++|+..++.+.+ .|.+.+ |+.+||||+|.+.|.+....
T Consensus 233 ~~~~l~~~~~~~ad~Ii~~s~~~~~~~~~---~g~~~~------ki~vIpNgid~~~f~~~~~~---------------- 287 (475)
T cd03813 233 FFESLGRLAYQAADRITTLYEGNRERQIE---DGADPE------KIRVIPNGIDPERFAPARRA---------------- 287 (475)
T ss_pred HHHHHHHHHHHhCCEEEecCHHHHHHHHH---cCCCHH------HeEEeCCCcCHHHcCCcccc----------------
Confidence 1123466788999999999999887765 566655 89999999999888664310
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCC--hhHHHHHHHHHHHCC--Cc
Q 010448 284 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK--KPMEKQLEQLEILYP--EK 357 (510)
Q Consensus 284 ~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~--~~~~~~~~~l~~~~~--~~ 357 (510)
.. .++.++|+|+||+.+.||++.+++|++.+.+ ++++++|+|+|+ +.+.+.+++++.+++ ++
T Consensus 288 ----------~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~ 355 (475)
T cd03813 288 ----------RP--EKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDN 355 (475)
T ss_pred ----------cc--CCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCe
Confidence 01 1356899999999999999999999999876 689999999984 456778888887654 46
Q ss_pred eEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEc------CCceeEeccccccCC
Q 010448 358 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCE 431 (510)
Q Consensus 358 v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~------~~~G~l~~~~~~~~~ 431 (510)
|.+.+ .+++..+|+.+|++++||..|++|++++||||||+|||+|+.||..|++.+ |.+|+++
T Consensus 356 V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv-------- 424 (475)
T cd03813 356 VKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVV-------- 424 (475)
T ss_pred EEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEE--------
Confidence 77777 344567999999999999999999999999999999999999999999998 5699998
Q ss_pred CCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHH---hhccCChHHHHHHHHHHHH
Q 010448 432 AVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 483 (510)
Q Consensus 432 ~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~~y~ 483 (510)
++.|+++++++|.+++++ ++.+.++++++ +.+.|+|+.++++|.++|+
T Consensus 425 --~~~d~~~la~ai~~ll~~--~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 425 --PPADPEALARAILRLLKD--PELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred --CCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999998 55555555554 6788999999999999984
No 32
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=4.7e-33 Score=277.73 Aligned_cols=245 Identities=17% Similarity=0.191 Sum_probs=192.0
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| |||+|.+..... +.+. .++|+|+++|+......
T Consensus 87 ~~D-ivh~~~~~~~~~---~~~~-------~~~~~v~~~h~~~~~~~--------------------------------- 122 (335)
T cd03802 87 DFD-IVHNHSLHLPLP---FARP-------LPVPVVTTLHGPPDPEL--------------------------------- 122 (335)
T ss_pred CCC-EEEecCcccchh---hhcc-------cCCCEEEEecCCCCccc---------------------------------
Confidence 599 999998776655 2221 58999999995442110
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
..........+.++++|+...+.+... .++.+||||+|.+.|.+..
T Consensus 123 -~~~~~~~~~~~~~~~~s~~~~~~~~~~-------------~~~~vi~ngvd~~~~~~~~-------------------- 168 (335)
T cd03802 123 -LKLYYAARPDVPFVSISDAQRRPWPPL-------------PWVATVHNGIDLDDYPFRG-------------------- 168 (335)
T ss_pred -chHHHhhCcCCeEEEecHHHHhhcccc-------------cccEEecCCcChhhCCCCC--------------------
Confidence 012334567889999999998876541 1799999999998886522
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHH---CCCceEEec
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEIL---YPEKARGVA 362 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~---~~~~v~~~~ 362 (510)
.++..++|+||+.+.||++.+++++++. +++|+++|.|+. ...+.....+ ..+++.+.+
T Consensus 169 -------------~~~~~i~~~Gr~~~~Kg~~~li~~~~~~---~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~G 230 (335)
T cd03802 169 -------------PKGDYLLFLGRISPEKGPHLAIRAARRA---GIPLKLAGPVSD--PDYFYREIAPELLDGPDIEYLG 230 (335)
T ss_pred -------------CCCCEEEEEEeeccccCHHHHHHHHHhc---CCeEEEEeCCCC--HHHHHHHHHHhcccCCcEEEeC
Confidence 1346899999999999999999998764 799999999862 1222222222 246799999
Q ss_pred cCCHHHHHHHHHhCcEEEeCCCC-CCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHH
Q 010448 363 KFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 441 (510)
Q Consensus 363 ~~~~~~~~~~~~~adv~v~ps~~-E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~l 441 (510)
..+.+++..+++.+|++++||.+ |+||++++||||||+|||+++.||..|++.++.+|+++ ++ ++++
T Consensus 231 ~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~----------~~--~~~l 298 (335)
T cd03802 231 EVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLV----------DS--VEEL 298 (335)
T ss_pred CCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEe----------CC--HHHH
Confidence 99888888899999999999985 99999999999999999999999999999999999997 44 9999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHhhccCChHHHHHHHHHHHH
Q 010448 442 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 483 (510)
Q Consensus 442 a~~i~~ll~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 483 (510)
+++|.++.+. . .+.+++.+.++|||+.++++|.++|+
T Consensus 299 ~~~l~~l~~~--~---~~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 299 AAAVARADRL--D---RAACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHhcc--H---HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999988764 2 12344556789999999999999984
No 33
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=7.6e-33 Score=279.32 Aligned_cols=221 Identities=16% Similarity=0.174 Sum_probs=175.0
Q ss_pred HHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHH
Q 010448 209 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 288 (510)
Q Consensus 209 ~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (510)
.+..++.+|.|+++|+..++.+.+. +|.+ . .+||||+|...+.+ ...
T Consensus 137 ~~~~~~~ad~ii~~s~~~~~~~~~~--~~~~--------~-~~i~ngv~~~~~~~----------------------~~~ 183 (363)
T cd04955 137 EKLAVKFADRLIADSPGIKEYLKEK--YGRD--------S-TYIPYGADHVVSSE----------------------EDE 183 (363)
T ss_pred HHHHHhhccEEEeCCHHHHHHHHHh--cCCC--------C-eeeCCCcChhhcch----------------------hhh
Confidence 3557789999999999999998642 3332 3 89999999876543 112
Q ss_pred HHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCC--hhHHHHHHHHHHHCCCceEEeccCCH
Q 010448 289 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNI 366 (510)
Q Consensus 289 ~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~--~~~~~~~~~l~~~~~~~v~~~~~~~~ 366 (510)
.++.++++ +...++|+||+.+.||++.+++|+.++.. +++|+++|+|+ ..+.+.+.+. ....++|.+.+..+.
T Consensus 184 ~~~~~~~~---~~~~i~~~G~~~~~Kg~~~li~a~~~l~~-~~~l~ivG~~~~~~~~~~~~~~~-~~~~~~V~~~g~~~~ 258 (363)
T cd04955 184 ILKKYGLE---PGRYYLLVGRIVPENNIDDLIEAFSKSNS-GKKLVIVGNADHNTPYGKLLKEK-AAADPRIIFVGPIYD 258 (363)
T ss_pred hHHhcCCC---CCcEEEEEecccccCCHHHHHHHHHhhcc-CceEEEEcCCCCcchHHHHHHHH-hCCCCcEEEccccCh
Confidence 23445554 23578899999999999999999999865 89999999984 2344444432 223357889888888
Q ss_pred HHHHHHHHhCcEEEeCCCC-CCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHH
Q 010448 367 PLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 445 (510)
Q Consensus 367 ~~~~~~~~~adv~v~ps~~-E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i 445 (510)
++...+++++|++++||.. |+||++++|||+||+|||+|+.|+..|++.+ +|+++ ++.|. ++++|
T Consensus 259 ~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~----------~~~~~--l~~~i 324 (363)
T cd04955 259 QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYF----------KVGDD--LASLL 324 (363)
T ss_pred HHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEe----------cCchH--HHHHH
Confidence 8888899999999999999 9999999999999999999999999999976 77876 66665 99999
Q ss_pred HHHHHhhCHHHHHHHHHHH---hhccCChHHHHHHHHHHHH
Q 010448 446 RRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 483 (510)
Q Consensus 446 ~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~~y~ 483 (510)
.+++++ ++.+.++++++ +.++|||+.++++|.++|+
T Consensus 325 ~~l~~~--~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 325 EELEAD--PEEVSAMAKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999998 45555555544 4678999999999999884
No 34
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=2.7e-33 Score=282.10 Aligned_cols=275 Identities=18% Similarity=0.272 Sum_probs=211.1
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| |||+|..++.++..+++... .++++|+|.|+....+.. .
T Consensus 79 ~pd-iv~~~~~~~~~~~~l~~~~~------~~~~~v~~~h~~~~~~~~-------------------------------~ 120 (360)
T cd04951 79 KPD-VVHAHMFHANIFARLLRLFL------PSPPLICTAHSKNEGGRL-------------------------------R 120 (360)
T ss_pred CCC-EEEEcccchHHHHHHHHhhC------CCCcEEEEeeccCchhHH-------------------------------H
Confidence 599 99999887776666665542 578999999965421110 0
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
....+.....++.++++|+...+.+.+. .+++.+ ++.+||||+|...|.+... .
T Consensus 121 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~--~~~~~~------~~~~i~ng~~~~~~~~~~~------------------~ 174 (360)
T cd04951 121 MLAYRLTDFLSDLTTNVSKEALDYFIAS--KAFNAN------KSFVVYNGIDTDRFRKDPA------------------R 174 (360)
T ss_pred HHHHHHHhhccCceEEEcHHHHHHHHhc--cCCCcc------cEEEEccccchhhcCcchH------------------H
Confidence 0122334456888999999999998863 223333 8999999999887755321 1
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCC--CceEEe
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGV 361 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v~~~ 361 (510)
...++++++++ +++++++|+|++.+.||++.+++++.++.+ ++++|+|+|+|+ ..+.+++...+.+ .++.+.
T Consensus 175 ~~~~~~~~~~~--~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~ 250 (360)
T cd04951 175 RLKIRNALGVK--NDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP--LRATLERLIKALGLSNRVKLL 250 (360)
T ss_pred HHHHHHHcCcC--CCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC--cHHHHHHHHHhcCCCCcEEEe
Confidence 34567777875 355899999999999999999999999876 489999999988 3455666555543 457776
Q ss_pred ccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHH
Q 010448 362 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 441 (510)
Q Consensus 362 ~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~l 441 (510)
+.. +++..+|+.||++++||..|++|++++|||++|+|||+++.|+..|++.+ +|+++ .++|++++
T Consensus 251 g~~--~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~----------~~~~~~~~ 316 (360)
T cd04951 251 GLR--DDIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIV----------PISDPEAL 316 (360)
T ss_pred ccc--ccHHHHHHhhceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEe----------CCCCHHHH
Confidence 643 34567999999999999999999999999999999999999999999987 78887 88999999
Q ss_pred HHHHHHHHHhhCHHHHHHHH--HHHhhccCChHHHHHHHHHHHH
Q 010448 442 STTVRRALATYGTQALAEMM--KNGMAQDLSWKGPAKKWEETLL 483 (510)
Q Consensus 442 a~~i~~ll~~~~~~~~~~~~--~~~~~~~fs~~~~~~~~~~~y~ 483 (510)
+++|.+++++. ++....++ ++.+.++|||+.++++|.++|+
T Consensus 317 ~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 317 ANKIDEILKMS-GEERDIIGARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHhCC-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 99999999652 33333333 3346789999999999999996
No 35
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=4e-33 Score=295.69 Aligned_cols=283 Identities=14% Similarity=0.122 Sum_probs=203.7
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEE-EecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCC
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF-CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 204 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~-tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (510)
+|| |||+|...+.+++.++.+. .++|+|+ +.|+... ...+ ..+ ..
T Consensus 400 kpD-IVH~h~~~a~~lg~lAa~~-------~gvPvIv~t~h~~~~-~~~~----------~~~---------------~~ 445 (694)
T PRK15179 400 VPS-VVHIWQDGSIFACALAALL-------AGVPRIVLSVRTMPP-VDRP----------DRY---------------RV 445 (694)
T ss_pred CCc-EEEEeCCcHHHHHHHHHHH-------cCCCEEEEEeCCCcc-ccch----------hHH---------------HH
Confidence 599 9999988877776666654 4788876 5674321 0000 000 00
Q ss_pred cchHHHHHHHh--ccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhch
Q 010448 205 KINWMKAGILE--SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 282 (510)
Q Consensus 205 ~~~~~~~~~~~--ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (510)
....+...+.. ++.+++.|+..++.+.+. +|++.+ ++.+||||||...|.+...
T Consensus 446 ~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~~--~g~~~~------kI~VI~NGVd~~~f~~~~~---------------- 501 (694)
T PRK15179 446 EYDIIYSELLKMRGVALSSNSQFAAHRYADW--LGVDER------RIPVVYNGLAPLKSVQDDA---------------- 501 (694)
T ss_pred HHHHHHHHHHhcCCeEEEeCcHHHHHHHHHH--cCCChh------HEEEECCCcCHHhcCCCch----------------
Confidence 00111112223 446667777777777642 466654 8999999999887764321
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCC--Cce
Q 010448 283 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKA 358 (510)
Q Consensus 283 ~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v 358 (510)
....+..+.....++.++|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+ ..+.+++++.+++ ++|
T Consensus 502 ---~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~--~~~~L~~l~~~lgL~~~V 576 (694)
T PRK15179 502 ---CTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGP--LLESVREFAQRLGMGERI 576 (694)
T ss_pred ---hhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCc--chHHHHHHHHHcCCCCcE
Confidence 1111122222112345799999999999999999999998865 689999999997 5667777777654 467
Q ss_pred EEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccC-
Q 010448 359 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD- 437 (510)
Q Consensus 359 ~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d- 437 (510)
.+.+.. . ++..+|+.+|++++||.+|+||++++|||+||+|||+|+.||..|+|.++.+|+++ +++|
T Consensus 577 ~flG~~-~-dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv----------~~~d~ 644 (694)
T PRK15179 577 LFTGLS-R-RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTL----------PADTV 644 (694)
T ss_pred EEcCCc-c-hHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEe----------CCCCC
Confidence 776654 3 45679999999999999999999999999999999999999999999999999998 7666
Q ss_pred -HHHHHHHHHHHHHhhC-HHHHHHHHHHHhhccCChHHHHHHHHHHHH
Q 010448 438 -VAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLL 483 (510)
Q Consensus 438 -~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 483 (510)
+++++++|.+++.+.. ...+.+.+++.+.++|||+.++++|.++|+
T Consensus 645 ~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 645 TAPDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred ChHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 4689999988887632 234444455556789999999999999995
No 36
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=3.5e-33 Score=283.01 Aligned_cols=278 Identities=11% Similarity=0.130 Sum_probs=204.0
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEE-EecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCC
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF-CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 204 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~-tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (510)
+|| |||+|...+.+.+.+.... .++|+++ +.|.. ++. . .. +
T Consensus 280 rpD-IVHt~~~~a~l~g~laA~l-------agvpviv~~~h~~-----~~~-~------~~------------------r 321 (578)
T PRK15490 280 KLD-YLSVWQDGACLMIALAALI-------AGVPRIQLGLRGL-----PPV-V------RK------------------R 321 (578)
T ss_pred CCC-EEEEcCcccHHHHHHHHHh-------cCCCEEEEeeccc-----CCc-c------hh------------------h
Confidence 599 9999987776666666654 4888865 46741 110 0 00 0
Q ss_pred cchHHHHH-------HHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCC
Q 010448 205 KINWMKAG-------ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 277 (510)
Q Consensus 205 ~~~~~~~~-------~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~ 277 (510)
........ +..+| +++.|....+.+.+. ++++++ ++.+||||+|++.|.+....
T Consensus 322 ~~~~e~~~~~~a~~i~~~sd-~v~~s~~v~~~l~~~--lgip~~------KI~VIyNGVD~~rf~p~~~~---------- 382 (578)
T PRK15490 322 LFKPEYEPLYQALAVVPGVD-FMSNNHCVTRHYADW--LKLEAK------HFQVVYNGVLPPSTEPSSEV---------- 382 (578)
T ss_pred HHHHHHHHhhhhceeEecch-hhhccHHHHHHHHHH--hCCCHH------HEEEEeCCcchhhcCccchh----------
Confidence 01111111 22344 678888888888753 466666 89999999999888764320
Q ss_pred hhhchHHHHHHHHHH--hCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHH
Q 010448 278 VMDAKPLLKEALQAE--VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL 353 (510)
Q Consensus 278 ~~~~~~~~~~~~~~~--~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~ 353 (510)
....++. .+++ ++.++|+++||+.+.||++.+++++.++.+ ++++|+|+|+|+ .++.+++++.+
T Consensus 383 --------~~~~r~~~~~~l~--~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~--~~eeLk~la~e 450 (578)
T PRK15490 383 --------PHKIWQQFTQKTQ--DADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGD--LRAEAQKRAEQ 450 (578)
T ss_pred --------hHHHHHHhhhccC--CCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCch--hHHHHHHHHHH
Confidence 1122332 2333 344799999999999999999999988765 689999999998 56677777776
Q ss_pred CC--CceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCC
Q 010448 354 YP--EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCE 431 (510)
Q Consensus 354 ~~--~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~ 431 (510)
++ ++|.+.+. .+++..+|+.+|++++||.+|+||++++|||+||+|||+|+.||..|+|.++.+|+++
T Consensus 451 lgL~d~V~FlG~--~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LV-------- 520 (578)
T PRK15490 451 LGILERILFVGA--SRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFIL-------- 520 (578)
T ss_pred cCCCCcEEECCC--hhhHHHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEE--------
Confidence 54 46777765 3456679999999999999999999999999999999999999999999999999998
Q ss_pred CCCccCHHHHHHHHH---HHHHhhC-HHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Q 010448 432 AVDPVDVAAVSTTVR---RALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLN 484 (510)
Q Consensus 432 ~~~~~d~~~la~~i~---~ll~~~~-~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~ 484 (510)
++.|++++++++. .+.++.. ...+.+.+++.+.++|||+.++++|.++|..
T Consensus 521 --p~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 521 --DDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred --CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 8899888888763 3333311 1223344455567899999999999999964
No 37
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=4.2e-33 Score=283.41 Aligned_cols=217 Identities=13% Similarity=0.103 Sum_probs=159.8
Q ss_pred HHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHH
Q 010448 211 AGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 290 (510)
Q Consensus 211 ~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (510)
...+.++.++++|++.++.+.+. ++. .++.+||||+|++.+.+... ....+
T Consensus 186 ~~~~~~~~iV~~S~~l~~~~~~~--~~~--------~~i~vI~NGid~~~~~~~~~-------------------~~~~~ 236 (405)
T PRK10125 186 EMLALGCQFISPSQHVADAFNSL--YGP--------GRCRIINNGIDMATEAILAE-------------------LPPVR 236 (405)
T ss_pred HHhhcCcEEEEcCHHHHHHHHHH--cCC--------CCEEEeCCCcCccccccccc-------------------ccccc
Confidence 33445789999999999987742 221 28999999999754322110 00000
Q ss_pred HHhCCCCCCCCcEEEEecCc--ccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccC-CHH
Q 010448 291 AEVGLPVDRNIPVIGFIGRL--EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIP 367 (510)
Q Consensus 291 ~~~g~~~~~~~~~i~~~Grl--~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~-~~~ 367 (510)
..+++++|+++|+. .+.||++.+++|+..+. ++++|+++|.|++.. ..++.+.+.. +.+
T Consensus 237 ------~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-~~~~L~ivG~g~~~~-----------~~~v~~~g~~~~~~ 298 (405)
T PRK10125 237 ------ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-DKIELHTFGKFSPFT-----------AGNVVNHGFETDKR 298 (405)
T ss_pred ------cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-CCeEEEEEcCCCccc-----------ccceEEecCcCCHH
Confidence 11355789999994 46899999999999874 589999999886321 1235555543 556
Q ss_pred HHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHH
Q 010448 368 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 447 (510)
Q Consensus 368 ~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ 447 (510)
++..+|+++|++|+||.+|+||++++||||||+|||+|++||++|++.++ +|+++ +++|+++|++++..
T Consensus 299 ~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv----------~~~d~~~La~~~~~ 367 (405)
T PRK10125 299 KLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTV----------SEEEVLQLAQLSKP 367 (405)
T ss_pred HHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEE----------CCCCHHHHHhccCH
Confidence 67789999999999999999999999999999999999999999999875 99998 99999999987543
Q ss_pred HHHhhCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHH
Q 010448 448 ALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 485 (510)
Q Consensus 448 ll~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l 485 (510)
.+.+.........+++.+.++|||+.++++|.++|+++
T Consensus 368 ~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 368 EIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred HHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 22220000011223444578899999999999999864
No 38
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=1.9e-33 Score=284.46 Aligned_cols=210 Identities=14% Similarity=0.103 Sum_probs=162.3
Q ss_pred hccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhC
Q 010448 215 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 294 (510)
Q Consensus 215 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 294 (510)
.+|.++++|..+.+ +.+ .+...++|||.+.|.+... ..++..+
T Consensus 180 ~~d~vi~pS~~~~~-l~~---------------~~i~~v~GVd~~~f~~~~~---------------------~~~~~~~ 222 (462)
T PLN02846 180 YCHKVIRLSAATQD-YPR---------------SIICNVHGVNPKFLEIGKL---------------------KLEQQKN 222 (462)
T ss_pred hcCEEEccCHHHHH-Hhh---------------CEEecCceechhhcCCCcc---------------------cHhhhcC
Confidence 48999999986655 443 2344568999998876532 1222222
Q ss_pred CCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHH
Q 010448 295 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 372 (510)
Q Consensus 295 ~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~ 372 (510)
+.+.-.++++|+||+.+.||++.|++++.++.+ ++++|+|+|+|+ .++.+++++.+++..+.++.++.... .+
T Consensus 223 -~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp--~~~~L~~~a~~l~l~~~vf~G~~~~~--~~ 297 (462)
T PLN02846 223 -GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGE--DSDEVKAAAEKLELDVRVYPGRDHAD--PL 297 (462)
T ss_pred -CCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCc--cHHHHHHHHHhcCCcEEEECCCCCHH--HH
Confidence 211112468999999999999999999999875 589999999998 56778888877664444445553332 58
Q ss_pred HHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhh
Q 010448 373 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 452 (510)
Q Consensus 373 ~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~ 452 (510)
++.+|+||+||.+|+||++++||||||+|||+++.++ .+++.++.||+++ +|.+++++++.+++++.
T Consensus 298 ~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~------------~~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 298 FHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTY------------DDGKGFVRATLKALAEE 364 (462)
T ss_pred HHhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEec------------CCHHHHHHHHHHHHccC
Confidence 9999999999999999999999999999999999998 5999999999975 68999999999999863
Q ss_pred CHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Q 010448 453 GTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 484 (510)
Q Consensus 453 ~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~ 484 (510)
++.. +.+ ..+.|||+..++++.++|+-
T Consensus 365 -~~~~---~~~-a~~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 365 -PAPL---TDA-QRHELSWEAATERFLRVADL 391 (462)
T ss_pred -chhH---HHH-HHHhCCHHHHHHHHHHHhcc
Confidence 2222 222 23589999999999999974
No 39
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=4.8e-33 Score=280.66 Aligned_cols=268 Identities=16% Similarity=0.141 Sum_probs=202.3
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| |||+|.....+++.++++... ...+++.+.|.... . ..
T Consensus 84 ~~D-ii~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~h~~~~-~--------------~~------------------ 124 (359)
T PRK09922 84 QPD-IVICIDVISCLYANKARKKSG-----KQFKIFSWPHFSLD-H--------------KK------------------ 124 (359)
T ss_pred CCC-EEEEcCHHHHHHHHHHHHHhC-----CCCeEEEEecCccc-c--------------cc------------------
Confidence 599 999997666555555554321 24566777773210 0 00
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
......+..+|.++++|+..++.+.+ +|++.+ ++.+||||+|.+.+.....
T Consensus 125 -~~~~~~~~~~d~~i~~S~~~~~~~~~---~~~~~~------ki~vi~N~id~~~~~~~~~------------------- 175 (359)
T PRK09922 125 -HAECKKITCADYHLAISSGIKEQMMA---RGISAQ------RISVIYNPVEIKTIIIPPP------------------- 175 (359)
T ss_pred -hhhhhhhhcCCEEEEcCHHHHHHHHH---cCCCHH------HEEEEcCCCCHHHccCCCc-------------------
Confidence 00011236899999999999999986 566544 7999999999654422110
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcc--cccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCC--CceEEe
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGV 361 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~--~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v~~~ 361 (510)
...++++++|+||+. +.||++.+++++.++.. +++|+|+|+|+ ..+.+++++.+.+ ++|.+.
T Consensus 176 -----------~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~-~~~l~ivG~g~--~~~~l~~~~~~~~l~~~v~f~ 241 (359)
T PRK09922 176 -----------ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTTG-EWQLHIIGDGS--DFEKCKAYSRELGIEQRIIWH 241 (359)
T ss_pred -----------ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhCC-CeEEEEEeCCc--cHHHHHHHHHHcCCCCeEEEe
Confidence 112457999999996 46999999999998854 89999999998 4566777776543 568888
Q ss_pred ccCC--HHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEec-CCCccceEEcCCceeEeccccccCCCCCccCH
Q 010448 362 AKFN--IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV 438 (510)
Q Consensus 362 ~~~~--~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~-~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~ 438 (510)
+..+ .+.+..+|+.+|++++||.+|+||++++||||||+|||+++ .||..|++.++.+|+++ +++|+
T Consensus 242 G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv----------~~~d~ 311 (359)
T PRK09922 242 GWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELY----------TPGNI 311 (359)
T ss_pred cccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEE----------CCCCH
Confidence 7653 36777899999999999999999999999999999999999 89999999999999998 89999
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHH
Q 010448 439 AAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 487 (510)
Q Consensus 439 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 487 (510)
++++++|.+++++++ .+..........+|+-+...+++.++|..++.
T Consensus 312 ~~la~~i~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 312 DEFVGKLNKVISGEV--KYQHDAIPNSIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred HHHHHHHHHHHhCcc--cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 999999999999853 21122222235679999999999999988764
No 40
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=3.7e-32 Score=273.33 Aligned_cols=263 Identities=22% Similarity=0.283 Sum_probs=206.9
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
++| +||+|..........+.... .++|+++++|+...... ..
T Consensus 79 ~~D-ii~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-------------------------------~~ 120 (355)
T cd03799 79 GID-HIHAHFGTTPATVAMLASRL------GGIPYSFTAHGKDIFRS-------------------------------PD 120 (355)
T ss_pred CCC-EEEECCCCchHHHHHHHHHh------cCCCEEEEEeccccccc-------------------------------Cc
Confidence 599 99999764433333333322 47999999995432110 00
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
..+++..++.+|.++++|+.+++.+.+. +|.+.. ++.++|||+|.+.+.+...
T Consensus 121 ~~~~~~~~~~~~~vi~~s~~~~~~l~~~--~~~~~~------~~~vi~~~~d~~~~~~~~~------------------- 173 (355)
T cd03799 121 AIDLDEKLARADFVVAISEYNRQQLIRL--LGCDPD------KIHVVHCGVDLERFPPRPP------------------- 173 (355)
T ss_pred hHHHHHHHhhCCEEEECCHHHHHHHHHh--cCCCcc------cEEEEeCCcCHHHcCCccc-------------------
Confidence 0356778899999999999999999873 244433 8999999999887755320
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHC--CCceEEe
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGV 361 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~--~~~v~~~ 361 (510)
. ...+.+.|+|+|++.+.||++.+++++.++.+ ++++++++|.|+ ..+.+++...+. +.++.+.
T Consensus 174 --------~--~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~ 241 (355)
T cd03799 174 --------P--PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGP--LRDELEALIAELGLEDRVTLL 241 (355)
T ss_pred --------c--ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCc--cHHHHHHHHHHcCCCCeEEEC
Confidence 0 11245789999999999999999999999876 589999999987 344555555543 3468888
Q ss_pred ccCCHHHHHHHHHhCcEEEeCCCC------CCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCc
Q 010448 362 AKFNIPLAHMIIAGADFILIPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 435 (510)
Q Consensus 362 ~~~~~~~~~~~~~~adv~v~ps~~------E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~ 435 (510)
+..+.+++..+|++||++++||.. |++|++++|||++|+|||+++.|+..+++.++.+|+++ ++
T Consensus 242 g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~----------~~ 311 (355)
T cd03799 242 GAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLV----------PP 311 (355)
T ss_pred CcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEe----------CC
Confidence 888888888999999999999999 99999999999999999999999999999999899998 88
Q ss_pred cCHHHHHHHHHHHHHhhCHHHHHHHHHHH---hhccCChHHHHHH
Q 010448 436 VDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKK 477 (510)
Q Consensus 436 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~~~ 477 (510)
+|+++++++|.+++++ ++.+.++++++ +.++|||+.++++
T Consensus 312 ~~~~~l~~~i~~~~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 312 GDPEALADAIERLLDD--PELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred CCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 8999999999999998 55555555554 5789999998865
No 41
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.2e-32 Score=273.96 Aligned_cols=226 Identities=27% Similarity=0.390 Sum_probs=186.6
Q ss_pred hHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHH
Q 010448 207 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 286 (510)
Q Consensus 207 ~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (510)
...+..++.+|.++++|+.+.+.+.. .+.. ++.+++||+|.+.|.+... .
T Consensus 136 ~~~~~~~~~~d~i~~~s~~~~~~~~~---~~~~--------~~~~~~~g~~~~~~~~~~~-------------------~ 185 (364)
T cd03814 136 AYLRWFHNRADRVLVPSPSLADELRA---RGFR--------RVRLWPRGVDTELFHPRRR-------------------D 185 (364)
T ss_pred HHHHHHHHhCCEEEeCCHHHHHHHhc---cCCC--------ceeecCCCccccccCcccc-------------------c
Confidence 44577788999999999999996664 2322 7899999999988766432 2
Q ss_pred HHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh-CCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCC
Q 010448 287 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 365 (510)
Q Consensus 287 ~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~-~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~ 365 (510)
...+.+++ + .++++++|+|++.+.||++.+++++.++.+ ++++|+++|.|+. ...++ ....++.+.+..+
T Consensus 186 ~~~~~~~~-~--~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~--~~~~~----~~~~~v~~~g~~~ 256 (364)
T cd03814 186 EALRARLG-P--PDRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPA--RARLE----ARYPNVHFLGFLD 256 (364)
T ss_pred HHHHHHhC-C--CCCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCch--HHHHh----ccCCcEEEEeccC
Confidence 22334444 2 345799999999999999999999999976 5899999999872 33333 3335688888888
Q ss_pred HHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHH
Q 010448 366 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 445 (510)
Q Consensus 366 ~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i 445 (510)
.+++..+|+.||++++||..|++|++++|||+||+|||+++.++..+++.++.+|+++ ++.|.++++++|
T Consensus 257 ~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i 326 (364)
T cd03814 257 GEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLV----------EPGDAEAFAAAL 326 (364)
T ss_pred HHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEc----------CCCCHHHHHHHH
Confidence 8888899999999999999999999999999999999999999999999999999998 899999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHh--hccCChHHHHHHHHHHHH
Q 010448 446 RRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 483 (510)
Q Consensus 446 ~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~~~~~~~~y~ 483 (510)
.+++++ ++.+.++++++. .++|+|+.+++++.++|+
T Consensus 327 ~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 327 AALLAD--PELRRRMAARARAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHcC--HHHHHHHHHHHHHHHhhcCHHHHHHHHHHhhC
Confidence 999998 566666666653 368999999999999874
No 42
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=3.9e-32 Score=272.62 Aligned_cols=343 Identities=18% Similarity=0.190 Sum_probs=243.4
Q ss_pred chhhhhHHHHHHHCCCcEEEEeeCCCCcccccCCcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCCCc
Q 010448 3 NASSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSK 82 (510)
Q Consensus 3 ~~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~~~ 82 (510)
+..+..|+++|.+.||+|.+++......... .....|++++.++.+....
T Consensus 15 ~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~---------------------~~~~~~i~v~~~~~~~~~~--------- 64 (365)
T cd03807 15 ERMLVRLLKGLDRDRFEHVVISLTDRGELGE---------------------ELEEAGVPVYCLGKRPGRP--------- 64 (365)
T ss_pred HHHHHHHHHHhhhccceEEEEecCcchhhhH---------------------HHHhcCCeEEEEecccccc---------
Confidence 3457789999999999999998652211000 0001477777664432100
Q ss_pred ccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEE
Q 010448 83 IYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 162 (510)
Q Consensus 83 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~ 162 (510)
.......+.+.+++. +|| +||+|.+.+.+......... .+.++++
T Consensus 65 ----------------~~~~~~~~~~~~~~~------------~~d-iv~~~~~~~~~~~~~~~~~~------~~~~~i~ 109 (365)
T cd03807 65 ----------------DPGALLRLYKLIRRL------------RPD-VVHTWMYHADLYGGLAARLA------GVPPVIW 109 (365)
T ss_pred ----------------cHHHHHHHHHHHHhh------------CCC-EEEeccccccHHHHHHHHhc------CCCcEEE
Confidence 011222233333333 499 99999877766655555432 4789999
Q ss_pred EecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhh
Q 010448 163 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN 242 (510)
Q Consensus 163 tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~ 242 (510)
++|+...... .... .....+.+...+.+|.++++|+...+.+.+ .|.+.+
T Consensus 110 ~~~~~~~~~~---------~~~~-----------------~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~---~~~~~~- 159 (365)
T cd03807 110 GIRHSDLDLG---------KKST-----------------RLVARLRRLLSSFIPLIVANSAAAAEYHQA---IGYPPK- 159 (365)
T ss_pred EecCCccccc---------chhH-----------------hHHHHHHHHhccccCeEEeccHHHHHHHHH---cCCChh-
Confidence 9996543210 0000 011122345566789999999999999886 355544
Q ss_pred hhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHH
Q 010448 243 IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAA 322 (510)
Q Consensus 243 ~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a 322 (510)
++.++|||+|...+.+.... ....+++++++ ++.++++|+|++.+.||++.++++
T Consensus 160 -----~~~vi~~~~~~~~~~~~~~~------------------~~~~~~~~~~~--~~~~~i~~~G~~~~~K~~~~li~a 214 (365)
T cd03807 160 -----KIVVIPNGVDTERFSPDLDA------------------RARLREELGLP--EDTFLIGIVARLHPQKDHATLLRA 214 (365)
T ss_pred -----heeEeCCCcCHHhcCCcccc------------------hHHHHHhcCCC--CCCeEEEEecccchhcCHHHHHHH
Confidence 88999999998877654321 34456677876 355899999999999999999999
Q ss_pred HHhhhh--CCcEEEEEecCChhHHHHHHHHHH-H--CCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHH
Q 010448 323 IPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI-L--YPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 397 (510)
Q Consensus 323 ~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~-~--~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama 397 (510)
+.++.+ ++++|+++|.++. ....+.... + ...++.+.+.. +++..+|+.||++++||..|++|++++|||+
T Consensus 215 ~~~l~~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a 290 (365)
T cd03807 215 AALLLKKFPNARLLLVGDGPD--RANLELLALKELGLEDKVILLGER--SDVPALLNALDVFVLSSLSEGFPNVLLEAMA 290 (365)
T ss_pred HHHHHHhCCCeEEEEecCCcc--hhHHHHHHHHhcCCCceEEEcccc--ccHHHHHHhCCEEEeCCccccCCcHHHHHHh
Confidence 999876 5899999999873 222333322 2 23356655533 4466899999999999999999999999999
Q ss_pred hCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHH---hhccCChHHH
Q 010448 398 YGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGP 474 (510)
Q Consensus 398 ~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~ 474 (510)
||+|||+++.|+..+++.+ +|+++ +++|+++++++|.+++++ ++.+.++++++ +.++|||+.+
T Consensus 291 ~g~PvI~~~~~~~~e~~~~--~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~~~~~~~~~~~~~~s~~~~ 356 (365)
T cd03807 291 CGLPVVATDVGDNAELVGD--TGFLV----------PPGDPEALAEAIEALLAD--PALRQALGEAARERIEENFSIEAM 356 (365)
T ss_pred cCCCEEEcCCCChHHHhhc--CCEEe----------CCCCHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999987 88988 889999999999999998 44444444444 5788999999
Q ss_pred HHHHHHHHH
Q 010448 475 AKKWEETLL 483 (510)
Q Consensus 475 ~~~~~~~y~ 483 (510)
+++|.++|+
T Consensus 357 ~~~~~~~y~ 365 (365)
T cd03807 357 VEAYEELYR 365 (365)
T ss_pred HHHHHHHhC
Confidence 999999884
No 43
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=3.2e-31 Score=281.55 Aligned_cols=422 Identities=19% Similarity=0.238 Sum_probs=305.5
Q ss_pred EEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCCC-cccCCCCCCCCCChHHH---HHHHHHHHHHhhhhcC
Q 010448 39 VIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQS-KIYGPRTGEDYQDNQLR---FSLLCQAALEAPRILN 114 (510)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~~-~~y~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 114 (510)
.+.+.+.++....+.++...++|++++++++.+....+.|... ++|+. ++..| +.+|+.+.++.++.++
T Consensus 174 ~v~v~l~g~~v~~rvw~~~vg~v~lylLDtd~~~n~~~~R~iT~~LYg~-------D~~~Rl~Qe~~Lg~agl~~Lr~lg 246 (778)
T cd04299 174 RVSVELPGRTVYARVWKAQVGRVPLYLLDTDIPENSPDDRGITDRLYGG-------DQETRIQQEILLGIGGVRALRALG 246 (778)
T ss_pred EEEEeeCCCceEEEEEEEEcCCCCEEEecCCccccchhhcccccCCCCC-------cHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5567777777788899988899999999998754444444432 46762 35566 5899999999988876
Q ss_pred cCCCCCCCCCCCCCeEEEeccchhhhHHH-----HHHHh-hcCCC--CCCCCcEEEEecCCCccc--ccCccchhh----
Q 010448 115 LNSNKYFSGPYGEDVVFVANDWHTSLIPC-----YLKTM-YKPKG--MYKSAKVVFCIHNIAYQG--RFAFEDFGL---- 180 (510)
Q Consensus 115 ~~~~~~~~~~~~pD~iih~h~~~~~~~~~-----~l~~~-~~~~~--~~~~~~~V~tiH~~~~~~--~~~~~~~~~---- 180 (510)
. +|| |||+|+||++++++ ++... +.... ...+..+|||+|++.++| .||...+..
T Consensus 247 ~----------~pd-ViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~ 315 (778)
T cd04299 247 I----------KPT-VYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGP 315 (778)
T ss_pred C----------CCe-EEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhH
Confidence 4 499 99999999999998 44321 10000 013578999999999999 898766632
Q ss_pred ----cCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHH---HHHHhcCCCCCCchhhhhhcCCceEec
Q 010448 181 ----LNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY---AQELVSGEDKGVELDNIIRKTGIKGIV 253 (510)
Q Consensus 181 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~---~~~l~~~~~~g~~~~~~~~~~ki~vIp 253 (510)
++++...+......... -....+++++.++..|+.|.+||+-+ .+.+.+....|.+.. ..++..|.
T Consensus 316 ~~~~lgl~~~~~~~lg~e~~~---~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~----~~~i~~IT 388 (778)
T cd04299 316 YARELGLSRDRFLALGRENPG---DDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPVE----EVPIGHVT 388 (778)
T ss_pred HHHHcCCCHHHHhhhcccccc---CccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcc----cCceecee
Confidence 45554433221111100 00135789999999999999999987 455543223455432 33799999
Q ss_pred CCCCCCCCC-CCCccccccCC---------------------CcCChhhchHHHHHHHHHHh------------------
Q 010448 254 NGMDVQEWN-PLTDKYIGVKY---------------------DASTVMDAKPLLKEALQAEV------------------ 293 (510)
Q Consensus 254 ngvd~~~~~-~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~------------------ 293 (510)
|||+...|. |..+..+ .++ ....+++.|..+|..+.+.+
T Consensus 389 NGVh~~~W~~P~~~~l~-~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~ 467 (778)
T cd04299 389 NGVHVPTWVAPEMRELY-DRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEI 467 (778)
T ss_pred CCcchhhhcCHHHHHHH-HHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhh
Confidence 999999998 5443333 222 12334556666666554432
Q ss_pred ---CCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh------CCcEEEEEecCC------hhHHHHHHHHHH--HCCC
Q 010448 294 ---GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK------KPMEKQLEQLEI--LYPE 356 (510)
Q Consensus 294 ---g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~------~~~~l~i~G~g~------~~~~~~~~~l~~--~~~~ 356 (510)
+.+.+++.++|+|++|+..+|+.++++..+.++.+ .+++|+++|++. ..+.+.+.+++. .+++
T Consensus 468 ~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~ 547 (778)
T cd04299 468 GEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRG 547 (778)
T ss_pred hhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCC
Confidence 45566788999999999999999999999888754 479999999987 345557777777 5667
Q ss_pred ceEEeccCCHHHHHHHHHhCcEEEeCCC--CCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccc--cccCCC
Q 010448 357 KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSF--SVDCEA 432 (510)
Q Consensus 357 ~v~~~~~~~~~~~~~~~~~adv~v~ps~--~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~--~~~~~~ 432 (510)
+|.+...|+....+.++++||+.++||+ +|+||++-+-||..|.+-+++--|...|.. ++.|||.++.- ..+...
T Consensus 548 kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~~~~~~ 626 (778)
T cd04299 548 RIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEYEDDEY 626 (778)
T ss_pred cEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCccccChhh
Confidence 8999999999999999999999999999 899999999999999999999999998887 78999999530 000111
Q ss_pred CCccCHHHHHHHHHHHHH-hh-C------HHHHHHHHHHHhhc---cCChHHHHHHHHH-HHHHHHH
Q 010448 433 VDPVDVAAVSTTVRRALA-TY-G------TQALAEMMKNGMAQ---DLSWKGPAKKWEE-TLLNLEV 487 (510)
Q Consensus 433 ~~~~d~~~la~~i~~ll~-~~-~------~~~~~~~~~~~~~~---~fs~~~~~~~~~~-~y~~l~~ 487 (510)
-+..|+++|.+.|.+.+- .+ + +..+.+++++++.+ .|||.+|+++|.+ +|.....
T Consensus 627 ~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~p~~~ 693 (778)
T cd04299 627 QDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYLPAAR 693 (778)
T ss_pred cchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHHHHHH
Confidence 123678888888865333 22 1 45788999999766 9999999999987 4544433
No 44
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=4.6e-32 Score=273.20 Aligned_cols=262 Identities=16% Similarity=0.129 Sum_probs=189.7
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| |||+|......++.++.+.. ....++++.|+......... . . ...
T Consensus 80 ~~D-vv~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~---------~-~---------------~~~ 127 (358)
T cd03812 80 KYD-IVHVHGSSASGFILLAAKKA------GVKVRIAHSHNTSDSHDKKK---------K-I---------------LKY 127 (358)
T ss_pred CCC-EEEEeCcchhHHHHHHHhhC------CCCeEEEEeccccccccccc---------h-h---------------hHH
Confidence 599 99999876554544444332 23345778886443211100 0 0 000
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
..+.+..++.+|.++++|+...+.+.+. .+ +.++.+||||+|.+.+.+....
T Consensus 128 ~~~~~~~~~~~~~~i~~s~~~~~~~~~~----~~------~~~~~vi~ngvd~~~~~~~~~~------------------ 179 (358)
T cd03812 128 KVLRKLINRLATDYLACSEEAGKWLFGK----VK------NKKFKVIPNGIDLEKFIFNEEI------------------ 179 (358)
T ss_pred HHHHHHHHhcCCEEEEcCHHHHHHHHhC----CC------cccEEEEeccCcHHHcCCCchh------------------
Confidence 1223556788999999999999988752 22 2389999999998877654320
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCC--CceEEe
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGV 361 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v~~~ 361 (510)
+.. ++..+.. +++++|+|+||+.+.||++.+++++..+.+ ++++++|+|+|+ ..+.+++...+.+ +++.+.
T Consensus 180 ~~~-~~~~~~~--~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~ 254 (358)
T cd03812 180 RKK-RRELGIL--EDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGE--LEEEIKKKVKELGLEDKVIFL 254 (358)
T ss_pred hhH-HHHcCCC--CCCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHhcCCCCcEEEe
Confidence 111 3444443 356899999999999999999999999976 589999999988 4455666655443 467776
Q ss_pred ccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHH
Q 010448 362 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 441 (510)
Q Consensus 362 ~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~l 441 (510)
+. .+++..+|+.||++|+||..|++|++++||||+|+|||+|+.||..+++.+ ..|++. .+++++++
T Consensus 255 g~--~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~----------~~~~~~~~ 321 (358)
T cd03812 255 GV--RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLS----------LDESPEIW 321 (358)
T ss_pred cc--cCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEe----------CCCCHHHH
Confidence 65 345667999999999999999999999999999999999999999999998 456665 67789999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHhhc
Q 010448 442 STTVRRALATYGTQALAEMMKNGMAQ 467 (510)
Q Consensus 442 a~~i~~ll~~~~~~~~~~~~~~~~~~ 467 (510)
+++|.+++++ ++...++..++..+
T Consensus 322 a~~i~~l~~~--~~~~~~~~~~~~~~ 345 (358)
T cd03812 322 AEEILKLKSE--DRRERSSESIKKKG 345 (358)
T ss_pred HHHHHHHHhC--cchhhhhhhhhhcc
Confidence 9999999998 44555555554433
No 45
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=6.8e-32 Score=272.44 Aligned_cols=223 Identities=22% Similarity=0.285 Sum_probs=181.8
Q ss_pred HhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHh
Q 010448 214 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 293 (510)
Q Consensus 214 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (510)
..++.++++|+...+.+.+. +.++ ..++.++|||+|.+.|.+.. +...++.+
T Consensus 134 ~~~~~~v~~s~~~~~~~~~~--~~~~------~~~~~vi~ngi~~~~~~~~~--------------------~~~~~~~~ 185 (365)
T cd03825 134 DLNLTIVAPSRWLADCARSS--SLFK------GIPIEVIPNGIDTTIFRPRD--------------------KREARKRL 185 (365)
T ss_pred cCCcEEEehhHHHHHHHHhc--cccC------CCceEEeCCCCcccccCCCc--------------------HHHHHHHh
Confidence 45788999999999988763 1232 23899999999998886543 34556777
Q ss_pred CCCCCCCCcEEEEecCccc--ccChhhHHHHHHhhhh---CCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCC-HH
Q 010448 294 GLPVDRNIPVIGFIGRLEE--QKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN-IP 367 (510)
Q Consensus 294 g~~~~~~~~~i~~~Grl~~--~Kg~~~li~a~~~l~~---~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~-~~ 367 (510)
+++. +..++++.|+... .||++.+++++..+.+ ++++++++|.++..... ....++.+.+.++ .+
T Consensus 186 ~~~~--~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~~~~~~ 256 (365)
T cd03825 186 GLPA--DKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-------DLPFPVHYLGSLNDDE 256 (365)
T ss_pred CCCC--CCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-------cCCCceEecCCcCCHH
Confidence 7763 4467777777765 8999999999999986 68999999998732211 2334688888887 77
Q ss_pred HHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHH
Q 010448 368 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 447 (510)
Q Consensus 368 ~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ 447 (510)
.+..+|+.||++++||..|++|++++|||+||+|||+++.||..|++.++.+|+++ ++.|+++++++|.+
T Consensus 257 ~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~l~~ 326 (365)
T cd03825 257 SLALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLA----------KPGDPEDLAEGIEW 326 (365)
T ss_pred HHHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEe----------CCCCHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999899998 88899999999999
Q ss_pred HHHhhCHHHHHHHHHH---HhhccCChHHHHHHHHHHHHHH
Q 010448 448 ALATYGTQALAEMMKN---GMAQDLSWKGPAKKWEETLLNL 485 (510)
Q Consensus 448 ll~~~~~~~~~~~~~~---~~~~~fs~~~~~~~~~~~y~~l 485 (510)
++++ ++.+.+++++ ...++|||+.++++|.++|+++
T Consensus 327 l~~~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 327 LLAD--PDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHhC--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9998 4444444444 4567899999999999999864
No 46
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=2.3e-31 Score=269.38 Aligned_cols=365 Identities=20% Similarity=0.210 Sum_probs=245.5
Q ss_pred chhhhhHHHHHHHCCCcEEEEeeCCCCcccccCCcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCCCc
Q 010448 3 NASSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSK 82 (510)
Q Consensus 3 ~~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~~~ 82 (510)
+..+..|+++|+++||+|+++++.......... ........+|++++.+........ .
T Consensus 17 ~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~-------~ 74 (394)
T cd03794 17 AFRTTELAEELVKRGHEVTVITGSPNYPSGKIY---------------KGYKREEVDGVRVHRVPLPPYKKN-------G 74 (394)
T ss_pred ceeHHHHHHHHHhCCceEEEEecCCCccccccc---------------ccceEEecCCeEEEEEecCCCCcc-------c
Confidence 456788999999999999999986432221100 001223456888887754322210 0
Q ss_pred ccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchh--hhHHHHHHHhhcCCCCCCCCcE
Q 010448 83 IYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT--SLIPCYLKTMYKPKGMYKSAKV 160 (510)
Q Consensus 83 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~--~~~~~~l~~~~~~~~~~~~~~~ 160 (510)
+......+..+.......+.... .+|| +||+|.+.. ......++.. .++|+
T Consensus 75 ---------~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-~v~~~~~~~~~~~~~~~~~~~-------~~~~~ 127 (394)
T cd03794 75 ---------LLKRLLNYLSFALSALLALLKRR----------RRPD-VIIATSPPLLIALAALLLARL-------KGAPF 127 (394)
T ss_pred ---------hHHHHHhhhHHHHHHHHHHHhcc----------cCCC-EEEEcCChHHHHHHHHHHHHh-------cCCCE
Confidence 11111222223333333222111 2599 999986322 2222223322 48999
Q ss_pred EEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCch
Q 010448 161 VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVEL 240 (510)
Q Consensus 161 V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~ 240 (510)
++++|+..... ........... ........+.+..++.+|.++++|+...+.+.. .+.+.
T Consensus 128 i~~~h~~~~~~-----~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~---~~~~~ 187 (394)
T cd03794 128 VLEVRDLWPES-----AVALGLLKNGS------------LLYRLLRKLERLIYRRADAIVVISPGMREYLVR---RGVPP 187 (394)
T ss_pred EEEehhhcchh-----HHHccCccccc------------hHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHh---cCCCc
Confidence 99999643211 11000000000 000011234567788999999999999999873 33332
Q ss_pred hhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHH
Q 010448 241 DNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA 320 (510)
Q Consensus 241 ~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li 320 (510)
.++.++|||+|...+.+... ... +...... .++++++|+|++.+.||++.++
T Consensus 188 ------~~~~~i~~~~~~~~~~~~~~-------------------~~~-~~~~~~~--~~~~~i~~~G~~~~~k~~~~l~ 239 (394)
T cd03794 188 ------EKISVIPNGVDLELFKPPPA-------------------DES-LRKELGL--DDKFVVLYAGNIGRAQGLDTLL 239 (394)
T ss_pred ------CceEEcCCCCCHHHcCCccc-------------------hhh-hhhccCC--CCcEEEEEecCcccccCHHHHH
Confidence 38999999999877655432 001 2222222 3568999999999999999999
Q ss_pred HHHHhhhhC-CcEEEEEecCChhHHHHHHHHHHHC-CCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCc-----cHHHH
Q 010448 321 AAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILY-PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPC-----GLIQL 393 (510)
Q Consensus 321 ~a~~~l~~~-~~~l~i~G~g~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~-----g~~~~ 393 (510)
+++.++.+. +++++++|+|+ ..+.++++.... ..++.+.+..+.+++..+|+.||++++||..|++ |++++
T Consensus 240 ~~~~~l~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~ 317 (394)
T cd03794 240 EAAALLKDRPDIRFLIVGDGP--EKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLF 317 (394)
T ss_pred HHHHHHhhcCCeEEEEeCCcc--cHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHH
Confidence 999999764 89999999987 344444443322 2368888888888888999999999999998865 88899
Q ss_pred HHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHH---hhccCC
Q 010448 394 HAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLS 470 (510)
Q Consensus 394 Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fs 470 (510)
|||++|+|||+++.++..+.+.++.+|+++ +++|+++++++|.+++++ ++.+.++++++ +.++||
T Consensus 318 Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~s 385 (394)
T cd03794 318 EYMAAGKPVLASVDGESAELVEEAGAGLVV----------PPGDPEALAAAILELLDD--PEERAEMGENGRRYVEEKFS 385 (394)
T ss_pred HHHHCCCcEEEecCCCchhhhccCCcceEe----------CCCCHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999998999998 888999999999999987 55555555554 567999
Q ss_pred hHHHHHHH
Q 010448 471 WKGPAKKW 478 (510)
Q Consensus 471 ~~~~~~~~ 478 (510)
|+.++++|
T Consensus 386 ~~~~~~~~ 393 (394)
T cd03794 386 REKLAERL 393 (394)
T ss_pred HHHHHHhc
Confidence 99999886
No 47
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.3e-31 Score=267.71 Aligned_cols=267 Identities=21% Similarity=0.263 Sum_probs=200.7
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| +||+|.............. .+.|++++.|+....... .....
T Consensus 83 ~~D-ii~~~~~~~~~~~~~~~~~-------~~~~~i~~~h~~~~~~~~---------------------------~~~~~ 127 (357)
T cd03795 83 KAD-VIHLHFPNPLADLALLLLP-------RKKPVVVHWHSDIVKQKL---------------------------LLKLY 127 (357)
T ss_pred CCC-EEEEecCcchHHHHHHHhc-------cCceEEEEEcChhhccch---------------------------hhhhh
Confidence 599 9999864433222222211 378999999953221100 00011
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
..+++..+++||.++++|+.+.+.+.... ..+ .++.+||||+|.+.+.+....
T Consensus 128 ~~~~~~~~~~~d~vi~~s~~~~~~~~~~~--~~~-------~~~~~i~~gi~~~~~~~~~~~------------------ 180 (357)
T cd03795 128 RPLQRRFLRRADAIVATSPNYAETSPVLR--RFR-------DKVRVIPLGLDPARYPRPDAL------------------ 180 (357)
T ss_pred hHHHHHHHHhcCEEEeCcHHHHHHHHHhc--CCc-------cceEEecCCCChhhcCCcchh------------------
Confidence 23456788999999999999999776521 111 279999999998877654310
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHC--CCceEEecc
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAK 363 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~--~~~v~~~~~ 363 (510)
.. .....+ .+.++|+|+||+.+.||++.++++++++. +++++|+|+|+ ....++++..+. ..+|.+.+.
T Consensus 181 ~~---~~~~~~--~~~~~i~~~G~~~~~K~~~~li~a~~~l~--~~~l~i~G~g~--~~~~~~~~~~~~~~~~~V~~~g~ 251 (357)
T cd03795 181 EE---AIWRRA--AGRPFFLFVGRLVYYKGLDVLLEAAAALP--DAPLVIVGEGP--LEAELEALAAALGLLDRVRFLGR 251 (357)
T ss_pred hh---HhhcCC--CCCcEEEEecccccccCHHHHHHHHHhcc--CcEEEEEeCCh--hHHHHHHHHHhcCCcceEEEcCC
Confidence 00 112222 35589999999999999999999999996 89999999987 455666666433 347999998
Q ss_pred CCHHHHHHHHHhCcEEEeCCC--CCCccHHHHHHHHhCCCcEEecCCCccceEEc-CCceeEeccccccCCCCCccCHHH
Q 010448 364 FNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAA 440 (510)
Q Consensus 364 ~~~~~~~~~~~~adv~v~ps~--~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~-~~~G~l~~~~~~~~~~~~~~d~~~ 440 (510)
++.+++..+++.||++++||. .|++|++++|||+||+|||+++.++..+.+.+ +.+|+++ +++|+++
T Consensus 252 v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~----------~~~d~~~ 321 (357)
T cd03795 252 LDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVV----------PPGDPAA 321 (357)
T ss_pred CCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEe----------CCCCHHH
Confidence 898888899999999999996 49999999999999999999999999998886 8999998 8999999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHH---hhccCChHHHH
Q 010448 441 VSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPA 475 (510)
Q Consensus 441 la~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~ 475 (510)
++++|.+++++ ++.+.++++++ +.++|||+.++
T Consensus 322 ~~~~i~~l~~~--~~~~~~~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 322 LAEAIRRLLED--PELRERLGEAARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHHHC--HHHHHHHHHHHHHHHHHhcchHhhC
Confidence 99999999998 55555555554 67899999864
No 48
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=2.3e-31 Score=268.04 Aligned_cols=224 Identities=22% Similarity=0.310 Sum_probs=180.8
Q ss_pred HHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHH
Q 010448 210 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 289 (510)
Q Consensus 210 ~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (510)
+..++.++.++++|.......... .. ..++.+||||+|.+.+.+... ...
T Consensus 144 ~~~~~~~~~i~~~s~~~~~~~~~~----~~------~~~~~vi~~~~~~~~~~~~~~-------------------~~~- 193 (375)
T cd03821 144 RRLLQAAAAVHATSEQEAAEIRRL----GL------KAPIAVIPNGVDIPPFAALPS-------------------RGR- 193 (375)
T ss_pred HHHHhcCCEEEECCHHHHHHHHhh----CC------cccEEEcCCCcChhccCcchh-------------------hhh-
Confidence 556778999999998777776641 11 237999999999988765431 111
Q ss_pred HHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHC--CCceEEeccCC
Q 010448 290 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFN 365 (510)
Q Consensus 290 ~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~--~~~v~~~~~~~ 365 (510)
++.++.+ .+.++++|+||+.+.||++.+++++.++.+ ++++|+++|.++......++.+..+. ..++.+.+..+
T Consensus 194 ~~~~~~~--~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 271 (375)
T cd03821 194 RRKFPIL--PDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLY 271 (375)
T ss_pred hhhccCC--CCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCC
Confidence 4555554 356899999999999999999999999987 68999999998765566666554433 34688888888
Q ss_pred HHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHH
Q 010448 366 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 445 (510)
Q Consensus 366 ~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i 445 (510)
.+++..+|+.||++++||..|+||++++|||+||+|||+++.+|..+++.+ .+|+++ +.+.++++++|
T Consensus 272 ~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~~i 339 (375)
T cd03821 272 GEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVV-----------DDDVDALAAAL 339 (375)
T ss_pred hHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEe-----------CCChHHHHHHH
Confidence 888889999999999999999999999999999999999999999999998 789885 45669999999
Q ss_pred HHHHHhhCHHHHHHHHHH---HhhccCChHHHHHHHH
Q 010448 446 RRALATYGTQALAEMMKN---GMAQDLSWKGPAKKWE 479 (510)
Q Consensus 446 ~~ll~~~~~~~~~~~~~~---~~~~~fs~~~~~~~~~ 479 (510)
.+++++ ++.+.+++++ .+.++|||+.+++++.
T Consensus 340 ~~l~~~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 340 RRALEL--PQRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHhC--HHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 999998 4444444444 4579999999999885
No 49
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=4.8e-31 Score=264.72 Aligned_cols=213 Identities=21% Similarity=0.304 Sum_probs=175.3
Q ss_pred cceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCC
Q 010448 217 DMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 296 (510)
Q Consensus 217 d~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 296 (510)
|.++++|+...+.+.+ .+.+. .++.+||||+|...+.+... +.
T Consensus 145 d~ii~~s~~~~~~~~~---~~~~~------~~~~vi~n~~~~~~~~~~~~---------------------------~~- 187 (359)
T cd03823 145 DAVIAPSRFLLDRYVA---NGLFA------EKISVIRNGIDLDRAKRPRR---------------------------AP- 187 (359)
T ss_pred CEEEEeCHHHHHHHHH---cCCCc------cceEEecCCcChhhcccccc---------------------------CC-
Confidence 9999999999999886 33322 28999999999887654320 11
Q ss_pred CCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhC
Q 010448 297 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 376 (510)
Q Consensus 297 ~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~a 376 (510)
..++++++|+|++.+.||++.+++++.++.+++++|+++|.+.......... ....++.+.+.++.+++..+|+.|
T Consensus 188 -~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~a 263 (359)
T cd03823 188 -PGGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYEL---EGDPRVEFLGAYPQEEIDDFYAEI 263 (359)
T ss_pred -CCCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhh---cCCCeEEEeCCCCHHHHHHHHHhC
Confidence 1356899999999999999999999999977789999999987432222111 333568888888888888999999
Q ss_pred cEEEeCCC-CCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHH
Q 010448 377 DFILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 455 (510)
Q Consensus 377 dv~v~ps~-~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~ 455 (510)
|++++||. .|++|++++|||+||+|||+++.++..|++.++.+|+++ ++.|+++++++|.+++++ ++
T Consensus 264 d~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~--~~ 331 (359)
T cd03823 264 DVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLF----------PPGDAEDLAAALERLIDD--PD 331 (359)
T ss_pred CEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEE----------CCCCHHHHHHHHHHHHhC--hH
Confidence 99999998 699999999999999999999999999999999999998 899999999999999997 66
Q ss_pred HHHHHHHHHhhccCChHHHHHHHHHHHH
Q 010448 456 ALAEMMKNGMAQDLSWKGPAKKWEETLL 483 (510)
Q Consensus 456 ~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 483 (510)
.+.++++++. +.++.+.++++|.++|+
T Consensus 332 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 358 (359)
T cd03823 332 LLERLRAGIE-PPRSIEDQAEEYLKLYR 358 (359)
T ss_pred HHHHHHHhHH-HhhhHHHHHHHHHHHhh
Confidence 6667666653 33445899999999886
No 50
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=1.6e-30 Score=262.05 Aligned_cols=282 Identities=24% Similarity=0.330 Sum_probs=207.4
Q ss_pred CCCeEEEeccchh-hhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCC
Q 010448 126 GEDVVFVANDWHT-SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 204 (510)
Q Consensus 126 ~pD~iih~h~~~~-~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (510)
+|| +||+|.... ......+++. .++|+|+++|+... .+ ........... ...
T Consensus 84 ~~D-iv~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~--~~----~~~~~~~~~~~-------------~~~ 136 (374)
T cd03817 84 GPD-IVHTHTPFSLGLLGLRVARK-------LGIPVVATYHTMYE--DY----THYVPLGRLLA-------------RAV 136 (374)
T ss_pred CCC-EEEECCchhhhhHHHHHHHH-------cCCCEEEEecCCHH--HH----HHHHhcccchh-------------HHH
Confidence 599 999986432 2233333332 48999999995432 00 00000000000 001
Q ss_pred cc-hHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchH
Q 010448 205 KI-NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 283 (510)
Q Consensus 205 ~~-~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (510)
.. .+.+..++.+|.++++|+.+++.+.+ ++.+ .++.++|||+|...+.+...
T Consensus 137 ~~~~~~~~~~~~~d~i~~~s~~~~~~~~~---~~~~-------~~~~vi~~~~~~~~~~~~~~----------------- 189 (374)
T cd03817 137 VRRKLSRRFYNRCDAVIAPSEKIADLLRE---YGVK-------RPIEVIPTGIDLDRFEPVDG----------------- 189 (374)
T ss_pred HHHHHHHHHhhhCCEEEeccHHHHHHHHh---cCCC-------CceEEcCCccchhccCccch-----------------
Confidence 11 35577888999999999999998876 3332 26899999999887765431
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCC--CceE
Q 010448 284 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKAR 359 (510)
Q Consensus 284 ~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v~ 359 (510)
...++.+++. .+.++|+|+|++.+.||++.+++++..+.+ ++++++++|.|+ ..+.++++..+.+ .++.
T Consensus 190 ---~~~~~~~~~~--~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~ 262 (374)
T cd03817 190 ---DDERRKLGIP--EDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP--EREELEELARELGLADRVI 262 (374)
T ss_pred ---hHHHHhcCCC--CCCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHHcCCCCcEE
Confidence 1224555554 345899999999999999999999999886 689999999987 4555666655433 4688
Q ss_pred EeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHH
Q 010448 360 GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 439 (510)
Q Consensus 360 ~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~ 439 (510)
+.+.++.+++..+|+.||++++||..|++|++++|||+||+|||+++.|+..+++.++.+|+++ ++.+.
T Consensus 263 ~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~- 331 (374)
T cd03817 263 FTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLF----------PPGDE- 331 (374)
T ss_pred EeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEe----------CCCCH-
Confidence 8888888888899999999999999999999999999999999999999999999999999998 77777
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHh--hccCChHHHHHHHHHHHHH
Q 010448 440 AVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLN 484 (510)
Q Consensus 440 ~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~~~~~~~~y~~ 484 (510)
+++++|.+++++ ++.+.++++++. .++++ .++++.++|++
T Consensus 332 ~~~~~i~~l~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 332 ALAEALLRLLQD--PELRRRLSKNAEESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHHhC--hHHHHHHHHHHHHHHHHHH---HHHHHHHHHhc
Confidence 999999999998 555556665553 23343 56777777764
No 51
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=2.5e-30 Score=259.98 Aligned_cols=280 Identities=25% Similarity=0.370 Sum_probs=214.6
Q ss_pred CCCeEEEeccchh-hhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCC
Q 010448 126 GEDVVFVANDWHT-SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 204 (510)
Q Consensus 126 ~pD~iih~h~~~~-~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (510)
+|| +||+|.... ..+...+... .++|+++++|+......... ..
T Consensus 93 ~~d-ii~~~~~~~~~~~~~~~~~~-------~~~~~i~~~h~~~~~~~~~~---------------------------~~ 137 (377)
T cd03798 93 RPD-LIHAHFAYPDGFAAALLKRK-------LGIPLVVTLHGSDVNLLPRK---------------------------RL 137 (377)
T ss_pred CCC-EEEEeccchHHHHHHHHHHh-------cCCCEEEEeecchhcccCch---------------------------hh
Confidence 599 999884333 3333333332 47899999996543221100 01
Q ss_pred cchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHH
Q 010448 205 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 284 (510)
Q Consensus 205 ~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (510)
....++..++.+|.++++|+..++.+.+. +.+ ..++.++|||+|...+.+...
T Consensus 138 ~~~~~~~~~~~~d~ii~~s~~~~~~~~~~---~~~------~~~~~~i~~~~~~~~~~~~~~------------------ 190 (377)
T cd03798 138 LRALLRRALRRADAVIAVSEALADELKAL---GID------PEKVTVIPNGVDTERFSPADR------------------ 190 (377)
T ss_pred HHHHHHHHHhcCCeEEeCCHHHHHHHHHh---cCC------CCceEEcCCCcCcccCCCcch------------------
Confidence 22455778899999999999999999862 222 238999999999888766432
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHC--CCceEE
Q 010448 285 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARG 360 (510)
Q Consensus 285 ~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~--~~~v~~ 360 (510)
... ...+.. .+.++++++|++.+.||++.++++++.+.+ ++++++++|.++ ..+.++++.... ..++.+
T Consensus 191 -~~~--~~~~~~--~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~--~~~~~~~~~~~~~~~~~v~~ 263 (377)
T cd03798 191 -AEA--RKLGLP--EDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGP--LREALEALAAELGLEDRVTF 263 (377)
T ss_pred -HHH--HhccCC--CCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCc--chHHHHHHHHhcCCcceEEE
Confidence 011 222332 356899999999999999999999999976 489999999887 334455554433 346888
Q ss_pred eccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHH
Q 010448 361 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 440 (510)
Q Consensus 361 ~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~ 440 (510)
.+..+.+++..+++.||++++||..|++|++++|||++|+|||+++.++..+++.++.+|+++ ++.|+++
T Consensus 264 ~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~ 333 (377)
T cd03798 264 LGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLV----------PPGDPEA 333 (377)
T ss_pred eCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEE----------CCCCHHH
Confidence 888898888899999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHH
Q 010448 441 VSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 485 (510)
Q Consensus 441 la~~i~~ll~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l 485 (510)
++++|.++++++.. .....+.....++|+|+.+++++.++|+++
T Consensus 334 l~~~i~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 334 LAEAILRLLADPWL-RLGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHhcCcHH-HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 99999999998432 233334444678999999999999998763
No 52
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=100.00 E-value=1.5e-30 Score=263.94 Aligned_cols=324 Identities=15% Similarity=0.179 Sum_probs=203.4
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCccccc-CccchhhcCCChhhhcccccccCCCCCCCCC
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 204 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (510)
++| |+|+|+|.++.++..+++.. .++|+|+|.|.+.. |+. .... ..+...+. .+.......+.-...
T Consensus 148 ~~d-ViH~HeWm~g~a~~~lK~~~------~~VptVfTtHAT~~-GR~l~~g~---~~~y~~l~-~~~~d~eA~~~~I~~ 215 (590)
T cd03793 148 PAV-VAHFHEWQAGVGLPLLRKRK------VDVSTIFTTHATLL-GRYLCAGN---VDFYNNLD-YFDVDKEAGKRGIYH 215 (590)
T ss_pred CCe-EEEEcchhHhHHHHHHHHhC------CCCCEEEEeccccc-ccccccCC---cccchhhh-hcchhhhhhcccchH
Confidence 488 99999999999999998643 58999999997665 542 1000 00000000 000000000000112
Q ss_pred cchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHH
Q 010448 205 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 284 (510)
Q Consensus 205 ~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (510)
...+++.+...||.++++|+.+++++... ++.+++ + |||||+|.+.|.+..+. .+.+..
T Consensus 216 r~~iE~~aa~~Ad~fttVS~it~~E~~~L--l~~~pd------~--ViPNGid~~~f~~~~e~-----------~~~~~~ 274 (590)
T cd03793 216 RYCIERAAAHCAHVFTTVSEITAYEAEHL--LKRKPD------V--VLPNGLNVKKFSALHEF-----------QNLHAQ 274 (590)
T ss_pred HHHHHHHHHhhCCEEEECChHHHHHHHHH--hCCCCC------E--EeCCCcchhhcccchhh-----------hhhhHH
Confidence 23456788999999999999999999863 576655 3 99999999998765421 111111
Q ss_pred --------HHHHHHHHhCCCCCCCCcEEEE-ecCccc-ccChhhHHHHHHhhhh------CC--c-EEEEEecC-C----
Q 010448 285 --------LKEALQAEVGLPVDRNIPVIGF-IGRLEE-QKGSDILAAAIPHFIK------EN--V-QIIVLGTG-K---- 340 (510)
Q Consensus 285 --------~~~~~~~~~g~~~~~~~~~i~~-~Grl~~-~Kg~~~li~a~~~l~~------~~--~-~l~i~G~g-~---- 340 (510)
.+..++.+++++ .++++++| +||++. .||+|.+|+|+.+|.. .+ + -|+++=.+ .
T Consensus 275 ~k~ki~~f~~~~~~~~~~~~--~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~ 352 (590)
T cd03793 275 SKEKINEFVRGHFYGHYDFD--LDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNV 352 (590)
T ss_pred hhhhhhHHHHHHHhhhcCCC--CCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCH
Confidence 123355667764 24466666 799998 9999999999999975 12 2 23333211 0
Q ss_pred ---------hhHHHHHHHHHHHC---------------------------------------------------------
Q 010448 341 ---------KPMEKQLEQLEILY--------------------------------------------------------- 354 (510)
Q Consensus 341 ---------~~~~~~~~~l~~~~--------------------------------------------------------- 354 (510)
..+++.+.++....
T Consensus 353 ~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il 432 (590)
T cd03793 353 ESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPIL 432 (590)
T ss_pred HhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHH
Confidence 01122222210000
Q ss_pred ------------CC--ceEEeccC-------CHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCc---
Q 010448 355 ------------PE--KARGVAKF-------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL--- 410 (510)
Q Consensus 355 ------------~~--~v~~~~~~-------~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~--- 410 (510)
.+ +|+|...| -+....++++.||++|+||.+||||++++||||||+|||+|+.+|+
T Consensus 433 ~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~ 512 (590)
T cd03793 433 NHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCF 512 (590)
T ss_pred HHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhh
Confidence 11 23333322 1223457999999999999999999999999999999999999998
Q ss_pred -cceEEcC-CceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHH-HHhhccCChHHHHHHHHHHHHHHHH
Q 010448 411 -VDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKWEETLLNLEV 487 (510)
Q Consensus 411 -~e~v~~~-~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~-~~~~~~fs~~~~~~~~~~~y~~l~~ 487 (510)
.|++.++ ..|+.+..-. ..-.+.++++|+++|.++++....+.+...+. +...+.|+|++.++.|.+.|+..+.
T Consensus 513 v~E~v~~~~~~gi~V~~r~---~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 513 MEEHIEDPESYGIYIVDRR---FKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred hHHHhccCCCceEEEecCC---ccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 5555544 3566651000 00015678899999998885421222322222 2356889999999999999998764
No 53
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=1.5e-30 Score=262.09 Aligned_cols=279 Identities=20% Similarity=0.249 Sum_probs=199.7
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| +||+|.|.+.+.+.......... ...++|+|+++|+...... ....
T Consensus 76 ~~d-ii~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~h~~~~~~~-----------------------------~~~~ 124 (366)
T cd03822 76 GPD-VVVIQHEYGIFGGEAGLYLLLLL-RGLGIPVVVTLHTVLLHEP-----------------------------RPGD 124 (366)
T ss_pred CCC-EEEEeeccccccchhhHHHHHHH-hhcCCCEEEEEecCCcccc-----------------------------chhh
Confidence 499 99998755433222211111000 0148999999996511000 0011
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
...++..++.+|.++++|....+.+... .+ ..++.+||||+|...+.+...
T Consensus 125 ~~~~~~~~~~~d~ii~~s~~~~~~~~~~--~~--------~~~~~~i~~~~~~~~~~~~~~------------------- 175 (366)
T cd03822 125 RALLRLLLRRADAVIVMSSELLRALLLR--AY--------PEKIAVIPHGVPDPPAEPPES------------------- 175 (366)
T ss_pred hHHHHHHHhcCCEEEEeeHHHHHHHHhh--cC--------CCcEEEeCCCCcCcccCCchh-------------------
Confidence 2345777889999999974444443321 11 128999999999776644211
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHH---HHHHH--CCCce
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLE---QLEIL--YPEKA 358 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~---~l~~~--~~~~v 358 (510)
. ++...+ .+.++++|+|++.+.||++.+++++.++.+ ++++|+++|++.+....... ++..+ ...+|
T Consensus 176 ---~-~~~~~~--~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v 249 (366)
T cd03822 176 ---L-KALGGL--DGRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRV 249 (366)
T ss_pred ---h-HhhcCC--CCCeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcE
Confidence 0 222222 356899999999999999999999999986 58999999988643322211 11222 33468
Q ss_pred EEecc-CCHHHHHHHHHhCcEEEeCCCCC--CccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCc
Q 010448 359 RGVAK-FNIPLAHMIIAGADFILIPSRFE--PCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 435 (510)
Q Consensus 359 ~~~~~-~~~~~~~~~~~~adv~v~ps~~E--~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~ 435 (510)
.+.++ .+.+++..+|+.||++++||..| ++|++++|||+||+|||+++.|+ .+.+.++.+|+++ ++
T Consensus 250 ~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~----------~~ 318 (366)
T cd03822 250 IFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLV----------PP 318 (366)
T ss_pred EEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEE----------cC
Confidence 88887 78888889999999999999999 99999999999999999999999 7778888899998 88
Q ss_pred cCHHHHHHHHHHHHHhhCHHHHHHHHHHH--hhccCChHHHHHHHHHHHH
Q 010448 436 VDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 483 (510)
Q Consensus 436 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~~~~~~~~y~ 483 (510)
+|+++++++|.+++++ ++.+.++++++ ..++|||+.++++|.++|+
T Consensus 319 ~d~~~~~~~l~~l~~~--~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 319 GDPAALAEAIRRLLAD--PELAQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred CCHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 9999999999999998 55556666555 2344999999999999873
No 54
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=4.4e-30 Score=257.38 Aligned_cols=283 Identities=26% Similarity=0.405 Sum_probs=216.6
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| +||+|.+............ .++|+++++|+......... ... .....
T Consensus 85 ~~D-ii~~~~~~~~~~~~~~~~~-------~~~~~i~~~h~~~~~~~~~~---------~~~-------------~~~~~ 134 (374)
T cd03801 85 RFD-VVHAHDWLALLAAALAARL-------LGIPLVLTVHGLEFGRPGNE---------LGL-------------LLKLA 134 (374)
T ss_pred CCc-EEEEechhHHHHHHHHHHh-------cCCcEEEEeccchhhccccc---------hhH-------------HHHHH
Confidence 499 9999987776555433322 58999999996554221110 000 00112
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
..+.+..++.+|.++++|+.+.+.+.+. ++.+. .++.++|||+|...+.+..
T Consensus 135 ~~~~~~~~~~~d~~i~~s~~~~~~~~~~--~~~~~------~~~~~i~~~~~~~~~~~~~-------------------- 186 (374)
T cd03801 135 RALERRALRRADRIIAVSEATREELREL--GGVPP------EKITVIPNGVDTERFRPAP-------------------- 186 (374)
T ss_pred HHHHHHHHHhCCEEEEecHHHHHHHHhc--CCCCC------CcEEEecCcccccccCccc--------------------
Confidence 2345678889999999999999999863 23221 2799999999988775421
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHH--CCCceEEe
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGV 361 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~--~~~~v~~~ 361 (510)
...+...... .+.++++|+|++.+.||++.+++++..+.+ ++++|+++|.++ ....++++..+ ...++.+.
T Consensus 187 -~~~~~~~~~~--~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~ 261 (374)
T cd03801 187 -RAARRRLGIP--EDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGP--LREELEALAAELGLGDRVTFL 261 (374)
T ss_pred -hHHHhhcCCc--CCCeEEEEecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcH--HHHHHHHHHHHhCCCcceEEE
Confidence 1112222222 355899999999999999999999999876 489999999776 45555555433 33468888
Q ss_pred ccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHH
Q 010448 362 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 441 (510)
Q Consensus 362 ~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~l 441 (510)
+..+.+++..+|+.||++++|+..|++|++++|||++|+|||+++.++..+++.++.+|+++ ++.|++++
T Consensus 262 g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l 331 (374)
T cd03801 262 GFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLV----------PPGDPEAL 331 (374)
T ss_pred eccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEe----------CCCCHHHH
Confidence 88888888899999999999999999999999999999999999999999999999999998 88899999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHH---hhccCChHHHHHHHHHHHH
Q 010448 442 STTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 483 (510)
Q Consensus 442 a~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~~y~ 483 (510)
+++|.+++++ ++.+.++++++ ..+.|+|+.+++++.++|+
T Consensus 332 ~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 332 AEAILRLLDD--PELRRRLGEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHcC--hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 9999999998 55555555554 5789999999999998873
No 55
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=1.4e-30 Score=267.04 Aligned_cols=218 Identities=17% Similarity=0.137 Sum_probs=173.5
Q ss_pred HHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHH
Q 010448 208 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 287 (510)
Q Consensus 208 ~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (510)
+++..++.||.++++|++..+.+.+.. +.+ .++.+|+||+|.+.|.+...
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~~--~~~-------~~~~vi~~gvd~~~~~~~~~--------------------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSLW--KRN-------TKPSIVYPPCDVEELLKLPL--------------------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHHh--CcC-------CCcEEEcCCCCHHHhccccc---------------------
Confidence 456778899999999999999988631 111 27899999999877654321
Q ss_pred HHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--C-----CcEEEEEecCC----hhHHHHHHHHHHHCC-
Q 010448 288 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-----NVQIIVLGTGK----KPMEKQLEQLEILYP- 355 (510)
Q Consensus 288 ~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~-----~~~l~i~G~g~----~~~~~~~~~l~~~~~- 355 (510)
. ...+.++|+|+||+.+.||++.+++|+.++.+ + +++++|+|++. ..+.+.+++++.+++
T Consensus 232 ------~--~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l 303 (419)
T cd03806 232 ------D--EKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGL 303 (419)
T ss_pred ------c--cccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCC
Confidence 0 01245799999999999999999999999976 2 59999999874 235677788877653
Q ss_pred -CceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCc-cceEE---cCCceeEeccccccC
Q 010448 356 -EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL-VDTVE---EGFTGFQMGSFSVDC 430 (510)
Q Consensus 356 -~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~-~e~v~---~~~~G~l~~~~~~~~ 430 (510)
++|.+.+..+.+++..+|+.||++++||..|+||++++||||||+|||+++.||. .|++. ++.+|+++
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~------- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA------- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe-------
Confidence 5799999889899999999999999999999999999999999999999999875 57888 88999986
Q ss_pred CCCCccCHHHHHHHHHHHHHhhCHHHHHHHH--HHHhhccCChHHHHH
Q 010448 431 EAVDPVDVAAVSTTVRRALATYGTQALAEMM--KNGMAQDLSWKGPAK 476 (510)
Q Consensus 431 ~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~--~~~~~~~fs~~~~~~ 476 (510)
.|+++++++|.++++++ ++....++ ++.+.++|||+.+.+
T Consensus 377 -----~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 377 -----STAEEYAEAIEKILSLS-EEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred -----CCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 49999999999999973 22222222 222568899998753
No 56
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=1.4e-30 Score=260.37 Aligned_cols=339 Identities=18% Similarity=0.184 Sum_probs=234.8
Q ss_pred chhhhhHHHHHHHCCCcEEEEeeCCCCcccccCCcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCCCc
Q 010448 3 NASSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSK 82 (510)
Q Consensus 3 ~~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~~~ 82 (510)
+..+..|+++|.++||+|+++++...... .....|++++.++......
T Consensus 13 ~~~~~~l~~~L~~~g~~v~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~--------- 60 (359)
T cd03808 13 YSFRLPLIKALRAAGYEVHVVAPPGDELE-----------------------ELEALGVKVIPIPLDRRGI--------- 60 (359)
T ss_pred HHHHHHHHHHHHhcCCeeEEEecCCCccc-----------------------ccccCCceEEecccccccc---------
Confidence 34567899999999999999997632111 1122466666553321000
Q ss_pred ccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEE
Q 010448 83 IYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 162 (510)
Q Consensus 83 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~ 162 (510)
.....+ .....+.+.++.. +|| +||+|...+.++..+.++.. ...++++
T Consensus 61 -----------~~~~~~-~~~~~~~~~~~~~------------~~d-vv~~~~~~~~~~~~~~~~~~------~~~~~i~ 109 (359)
T cd03808 61 -----------NPFKDL-KALLRLYRLLRKE------------RPD-IVHTHTPKPGILGRLAARLA------GVPKVIY 109 (359)
T ss_pred -----------ChHhHH-HHHHHHHHHHHhc------------CCC-EEEEccccchhHHHHHHHHc------CCCCEEE
Confidence 001111 1122223333332 599 99999776666665555422 4678899
Q ss_pred EecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhh
Q 010448 163 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN 242 (510)
Q Consensus 163 tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~ 242 (510)
++|+......... ... .....+.+..++.+|.++++|+...+.+.+. +...
T Consensus 110 ~~~~~~~~~~~~~-------~~~-----------------~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~---~~~~-- 160 (359)
T cd03808 110 TVHGLGFVFTSGG-------LKR-----------------RLYLLLERLALRFTDKVIFQNEDDRDLALKL---GIIK-- 160 (359)
T ss_pred EecCcchhhccch-------hHH-----------------HHHHHHHHHHHhhccEEEEcCHHHHHHHHHh---cCCC--
Confidence 9996543111100 000 0111234667888999999999999998863 2211
Q ss_pred hhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHH
Q 010448 243 IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAA 322 (510)
Q Consensus 243 ~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a 322 (510)
...++.+++||+|.+.+.+... . . ..+.++++|+|++.+.||++.++++
T Consensus 161 --~~~~~~~~~~~~~~~~~~~~~~-------------------~--------~--~~~~~~i~~~G~~~~~k~~~~li~~ 209 (359)
T cd03808 161 --KKKTVLIPGSGVDLDRFSPSPE-------------------P--------I--PEDDPVFLFVARLLKDKGIDELLEA 209 (359)
T ss_pred --cCceEEecCCCCChhhcCcccc-------------------c--------c--CCCCcEEEEEeccccccCHHHHHHH
Confidence 0126778899999877755321 0 0 1356899999999999999999999
Q ss_pred HHhhhh--CCcEEEEEecCChhHHHHHHHHHHH--CCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHh
Q 010448 323 IPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY 398 (510)
Q Consensus 323 ~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~--~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~ 398 (510)
+..+.+ ++++|+++|.++........ +... ...++.+.+. .+++..+|+.||++++||..|++|++++|||+|
T Consensus 210 ~~~l~~~~~~~~l~i~G~~~~~~~~~~~-~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~ 286 (359)
T cd03808 210 ARILKAKGPNVRLLLVGDGDEENPAAIL-EIEKLGLEGRVEFLGF--RDDVPELLAAADVFVLPSYREGLPRVLLEAMAM 286 (359)
T ss_pred HHHHHhcCCCeEEEEEcCCCcchhhHHH-HHHhcCCcceEEEeec--cccHHHHHHhccEEEecCcccCcchHHHHHHHc
Confidence 999975 68999999998743222211 1222 2245776665 345667999999999999999999999999999
Q ss_pred CCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHH---hhccCChHHHH
Q 010448 399 GTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPA 475 (510)
Q Consensus 399 G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~ 475 (510)
|+|||+++.++..+++.++.+|+++ +++|+++++++|.+++++ ++.+.++++++ +.++|||+.++
T Consensus 287 G~Pvi~s~~~~~~~~i~~~~~g~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~~~~~~~~~~~~~s~~~~~ 354 (359)
T cd03808 287 GRPVIATDVPGCREAVIDGVNGFLV----------PPGDAEALADAIERLIED--PELRARMGQAARKRAEEEFDEEIVV 354 (359)
T ss_pred CCCEEEecCCCchhhhhcCcceEEE----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 9999999999999999999999998 889999999999999988 55555555544 57899999999
Q ss_pred HHHH
Q 010448 476 KKWE 479 (510)
Q Consensus 476 ~~~~ 479 (510)
++|.
T Consensus 355 ~~~~ 358 (359)
T cd03808 355 KKLL 358 (359)
T ss_pred HHhh
Confidence 8875
No 57
>PLN02949 transferase, transferring glycosyl groups
Probab=99.98 E-value=1.3e-29 Score=260.47 Aligned_cols=229 Identities=14% Similarity=0.103 Sum_probs=181.4
Q ss_pred HHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHH
Q 010448 210 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 289 (510)
Q Consensus 210 ~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (510)
....+.||.|++.|++.++.+.+. .+.+ .++.+++||+|.+.+.....
T Consensus 215 ~~~~~~ad~ii~nS~~t~~~l~~~--~~~~-------~~i~vvyp~vd~~~~~~~~~----------------------- 262 (463)
T PLN02949 215 GLVGRCAHLAMVNSSWTKSHIEAL--WRIP-------ERIKRVYPPCDTSGLQALPL----------------------- 262 (463)
T ss_pred HHHcCCCCEEEECCHHHHHHHHHH--cCCC-------CCeEEEcCCCCHHHcccCCc-----------------------
Confidence 444578999999999999998763 1221 26889999999765532110
Q ss_pred HHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh------CCcEEEEEecCC----hhHHHHHHHHHHHCC--Cc
Q 010448 290 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILYP--EK 357 (510)
Q Consensus 290 ~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~------~~~~l~i~G~g~----~~~~~~~~~l~~~~~--~~ 357 (510)
....+..+++++||+.+.||++.+|+|+.++.+ ++++|+|+|++. .++.+++++++.+++ ++
T Consensus 263 ------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~ 336 (463)
T PLN02949 263 ------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGD 336 (463)
T ss_pred ------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCc
Confidence 001234689999999999999999999998753 479999999874 234567777777653 57
Q ss_pred eEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCcc-ceEEc---CCceeEeccccccCCCC
Q 010448 358 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-DTVEE---GFTGFQMGSFSVDCEAV 433 (510)
Q Consensus 358 v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~-e~v~~---~~~G~l~~~~~~~~~~~ 433 (510)
|.+.+..+.+++..+|+.||++++||..|+||++++|||++|+|||+++.||.. |++.+ +.+|+++
T Consensus 337 V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~---------- 406 (463)
T PLN02949 337 VEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLA---------- 406 (463)
T ss_pred EEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccC----------
Confidence 999998898999999999999999999999999999999999999999999975 77765 5689875
Q ss_pred CccCHHHHHHHHHHHHHhhCHHHHHHHHHHH--hhccCChHHHHHHHHHHHHHHHHcC
Q 010448 434 DPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVAG 489 (510)
Q Consensus 434 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~~~~~~~~y~~l~~~~ 489 (510)
+|+++++++|.+++++. ++.+.++++++ ..++|||+.+++++.+.|+++++..
T Consensus 407 --~~~~~la~ai~~ll~~~-~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~~~ 461 (463)
T PLN02949 407 --TTVEEYADAILEVLRMR-ETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILNSA 461 (463)
T ss_pred --CCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhh
Confidence 49999999999999852 44444555544 2367999999999999999988753
No 58
>PHA01630 putative group 1 glycosyl transferase
Probab=99.98 E-value=1.2e-30 Score=257.51 Aligned_cols=230 Identities=15% Similarity=0.142 Sum_probs=173.6
Q ss_pred hHHHHH-HHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 207 NWMKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 207 ~~~~~~-~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
.++... .+.+|.|+++|+..++.+.+ .|.+. ..++.+||||+|.+.|.+...
T Consensus 85 ~~~~~~~~~~ad~ii~~S~~~~~~l~~---~g~~~-----~~~i~vIpNGVd~~~f~~~~~------------------- 137 (331)
T PHA01630 85 TALYFFRNQPVDEIVVPSQWSKNAFYT---SGLKI-----PQPIYVIPHNLNPRMFEYKPK------------------- 137 (331)
T ss_pred HHHHHHhhccCCEEEECCHHHHHHHHH---cCCCC-----CCCEEEECCCCCHHHcCCCcc-------------------
Confidence 345555 67899999999999999976 34331 127999999999988865321
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCCCceEEecc
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 363 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~ 363 (510)
...+.+++++.|++.+.||++.|++|++++.+ ++++++++|++..+ ..+. ...+ ..+.
T Consensus 138 -----------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~--~~l~----~~~~---~~~~ 197 (331)
T PHA01630 138 -----------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLD--PRLF----GLNG---VKTP 197 (331)
T ss_pred -----------ccCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccc--hhhc----cccc---eecc
Confidence 00134678888899999999999999999976 58999999976522 1111 1111 1234
Q ss_pred CCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccc----------cccCCCC
Q 010448 364 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSF----------SVDCEAV 433 (510)
Q Consensus 364 ~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~----------~~~~~~~ 433 (510)
.+.+++..+|+.||++++||..|+||++++||||||+|||+|+.||+.|++.++.||+++..- ...+.++
T Consensus 198 v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v 277 (331)
T PHA01630 198 LPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFL 277 (331)
T ss_pred CCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccccc
Confidence 677888899999999999999999999999999999999999999999999999999887311 0112223
Q ss_pred CccCHHHHHHHHHHHHHhhCHHHHHHHHHH---HhhccCChHHHHHHHHHHHHH
Q 010448 434 DPVDVAAVSTTVRRALATYGTQALAEMMKN---GMAQDLSWKGPAKKWEETLLN 484 (510)
Q Consensus 434 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~---~~~~~fs~~~~~~~~~~~y~~ 484 (510)
+ .|.+++++++.+++.+++++.+.+++.+ ...++|||++++++|+++|++
T Consensus 278 ~-~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 278 D-PDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred C-CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 3 3788899999999987533333333332 257899999999999999974
No 59
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.97 E-value=1.9e-30 Score=269.07 Aligned_cols=217 Identities=17% Similarity=0.119 Sum_probs=172.5
Q ss_pred HHhccceeecCHHHHHHHhcCCC-CCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHH
Q 010448 213 ILESDMVLTVSPHYAQELVSGED-KGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 291 (510)
Q Consensus 213 ~~~ad~vi~vS~~~~~~l~~~~~-~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (510)
.+.+|.++++|+..++.+.+... ++... .++.+||||++...+.+..
T Consensus 268 ~~~~D~iI~~S~~~~~~l~~~~~~~~~~~------~ki~viP~g~~~~~~~~~~-------------------------- 315 (500)
T TIGR02918 268 ADYIDFFITATDIQNQILKNQFKKYYNIE------PRIYTIPVGSLDELQYPEQ-------------------------- 315 (500)
T ss_pred hhhCCEEEECCHHHHHHHHHHhhhhcCCC------CcEEEEcCCCcccccCccc--------------------------
Confidence 45689999999998888775321 22221 2799999998754433211
Q ss_pred HhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCC--CceEEeccCCHH
Q 010448 292 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIP 367 (510)
Q Consensus 292 ~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v~~~~~~~~~ 367 (510)
.....+|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+ ..+.+++++.+.+ +.|.+.+..
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~--~~~~l~~~i~~~~l~~~V~f~G~~--- 384 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGG--EKQKLQKIINENQAQDYIHLKGHR--- 384 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECch--hHHHHHHHHHHcCCCCeEEEcCCC---
Confidence 0134689999999999999999999999875 699999999998 4567777776653 457776643
Q ss_pred HHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCC-CccceEEcCCceeEeccccccCCCCCc----cC----H
Q 010448 368 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDP----VD----V 438 (510)
Q Consensus 368 ~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~g-g~~e~v~~~~~G~l~~~~~~~~~~~~~----~d----~ 438 (510)
.+..+++.||++++||..|+||++++||||||+|||+++.+ |.+|+|.++.||+++ ++ +| +
T Consensus 385 ~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv----------~~~~~~~d~~~~~ 454 (500)
T TIGR02918 385 NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLI----------PIDEEEDDEDQII 454 (500)
T ss_pred CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEE----------eCCccccchhHHH
Confidence 34578999999999999999999999999999999999986 899999999999998 42 23 8
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHH--hhccCChHHHHHHHHHHHHHH
Q 010448 439 AAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 485 (510)
Q Consensus 439 ~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~~~~~~~~y~~l 485 (510)
++||++|.+++++ +.+.++++++ ..++|||+.++++|.++++++
T Consensus 455 ~~la~~I~~ll~~---~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 455 TALAEKIVEYFNS---NDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred HHHHHHHHHHhCh---HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999999999943 3456666665 467899999999999998764
No 60
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.97 E-value=2.8e-30 Score=260.07 Aligned_cols=275 Identities=22% Similarity=0.304 Sum_probs=206.5
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| +||+|.+..... + ..++|+|+++|+..+... +. .. .... ....
T Consensus 85 ~~D-ii~~~~~~~~~~----~--------~~~~~~i~~~hd~~~~~~-~~----~~--~~~~--------------~~~~ 130 (365)
T cd03809 85 GLD-LLHSPHNTAPLL----R--------LRGVPVVVTIHDLIPLRF-PE----YF--SPGF--------------RRYF 130 (365)
T ss_pred CCC-eeeecccccCcc----c--------CCCCCEEEEeccchhhhC-cc----cC--CHHH--------------HHHH
Confidence 499 999997666544 1 158999999996543111 00 00 0000 0012
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
..+++..++.+|.++++|+.+++.+.+. ++.+.+ ++.++|||+|...+.+...
T Consensus 131 ~~~~~~~~~~~d~~i~~s~~~~~~~~~~--~~~~~~------~~~vi~~~~~~~~~~~~~~------------------- 183 (365)
T cd03809 131 RRLLRRALRRADAIITVSEATKRDLLRY--LGVPPD------KIVVIPLGVDPRFRPPPAE------------------- 183 (365)
T ss_pred HHHHHHHHHHcCEEEEccHHHHHHHHHH--hCcCHH------HEEeeccccCccccCCCch-------------------
Confidence 2445778899999999999999999863 333333 7999999999887765321
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhC--CcEEEEEecCChhHHHHHHHH-HHHCCCceEEec
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQL-EILYPEKARGVA 362 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~--~~~l~i~G~g~~~~~~~~~~l-~~~~~~~v~~~~ 362 (510)
. . +...... .+.++|+|+|++.+.||++.+++++..+.+. +++|+++|.+..........+ ......++.+.+
T Consensus 184 ~-~-~~~~~~~--~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g 259 (365)
T cd03809 184 A-E-VLRALYL--LPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLG 259 (365)
T ss_pred H-H-HHHHhcC--CCCCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECC
Confidence 1 1 2222222 3568999999999999999999999999874 589999998764333333322 122345788888
Q ss_pred cCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHH
Q 010448 363 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS 442 (510)
Q Consensus 363 ~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la 442 (510)
..+.+++..+++.||++++||.+|++|++++|||++|+|||+++.|+..|++.+ +|+++ +++|+++++
T Consensus 260 ~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~--~~~~~----------~~~~~~~~~ 327 (365)
T cd03809 260 YVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAGD--AALYF----------DPLDPEALA 327 (365)
T ss_pred CCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceecC--ceeee----------CCCCHHHHH
Confidence 888899999999999999999999999999999999999999999999999854 67777 889999999
Q ss_pred HHHHHHHHhhCHHHHHHHHHHH--hhccCChHHHHHHHH
Q 010448 443 TTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWE 479 (510)
Q Consensus 443 ~~i~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~~~~~~ 479 (510)
++|.+++++ ++.+.++++++ ..++|||+++++++.
T Consensus 328 ~~i~~l~~~--~~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 328 AAIERLLED--PALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHHHHhcC--HHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 999999988 66666666655 468899999999875
No 61
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.97 E-value=7.6e-30 Score=254.02 Aligned_cols=212 Identities=23% Similarity=0.265 Sum_probs=168.9
Q ss_pred HHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHH
Q 010448 209 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 288 (510)
Q Consensus 209 ~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (510)
.+..++.+|.++++|+....... +.+ ..++.++|||++...+.+..
T Consensus 129 ~~~~~~~~d~ii~~s~~~~~~~~-----~~~------~~~~~vi~~~~~~~~~~~~~----------------------- 174 (348)
T cd03820 129 RRLLYRRADAVVVLTEEDRALYY-----KKF------NKNVVVIPNPLPFPPEEPSS----------------------- 174 (348)
T ss_pred HHHHHhcCCEEEEeCHHHHHHhh-----ccC------CCCeEEecCCcChhhccccC-----------------------
Confidence 57788999999999999872222 112 23899999999977654320
Q ss_pred HHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCC--CceEEeccC
Q 010448 289 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKF 364 (510)
Q Consensus 289 ~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v~~~~~~ 364 (510)
..+.++++|+|++.+.||++.++++++++.+ ++++|+|+|.++ ....++++..+.+ .++.+.+.
T Consensus 175 ---------~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~- 242 (348)
T cd03820 175 ---------DLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGP--EREALEALIKELGLEDRVILLGF- 242 (348)
T ss_pred ---------CCCCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCC--CHHHHHHHHHHcCCCCeEEEcCC-
Confidence 1245799999999999999999999999974 689999999987 3444555555443 34555554
Q ss_pred CHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCC-CccceEEcCCceeEeccccccCCCCCccCHHHHHH
Q 010448 365 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 443 (510)
Q Consensus 365 ~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~g-g~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~ 443 (510)
.+++..+|+.||++++||.+|++|++++|||+||+|||+++.+ +..+++.++.+|+++ ++.|++++++
T Consensus 243 -~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~----------~~~~~~~~~~ 311 (348)
T cd03820 243 -TKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLV----------PNGDVEALAE 311 (348)
T ss_pred -cchHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEe----------CCCCHHHHHH
Confidence 4666789999999999999999999999999999999999965 556777777799998 8999999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHH--hhccCChHHHHHHHH
Q 010448 444 TVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWE 479 (510)
Q Consensus 444 ~i~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~~~~~~ 479 (510)
+|.+++++ ++.+.++++++ ..++|+|++++++|.
T Consensus 312 ~i~~ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 312 ALLRLMED--EELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHcC--HHHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 99999998 66666666554 468899999999885
No 62
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=9.6e-30 Score=257.31 Aligned_cols=244 Identities=14% Similarity=0.084 Sum_probs=175.3
Q ss_pred CCCeEEEeccchhh---hHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCC-ChhhhcccccccCCCCCC
Q 010448 126 GEDVVFVANDWHTS---LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNL-PAQFKSSFDFIDGYNKPV 201 (510)
Q Consensus 126 ~pD~iih~h~~~~~---~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 201 (510)
+|| |||+|..... +++.++.+. .++|+|+|+|+..+. .. . .+. .... .
T Consensus 100 ~~D-vV~~~~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~-~~-----~-~~~~~~~~-------------~ 151 (371)
T PLN02275 100 RPD-VFLVQNPPSVPTLAVVKLACWL-------RRAKFVIDWHNFGYT-LL-----A-LSLGRSHP-------------L 151 (371)
T ss_pred CCC-EEEEeCCCCcHHHHHHHHHHHH-------hCCCEEEEcCCccHH-HH-----h-cccCCCCH-------------H
Confidence 599 9999865442 233333332 478999999965310 00 0 000 0000 0
Q ss_pred CCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhc
Q 010448 202 RGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDA 281 (510)
Q Consensus 202 ~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~ 281 (510)
......+.+..++.+|.|+++|+.+.+.+.+. .|+ ++.+||||+ .+.|.|...
T Consensus 152 ~~~~~~~e~~~~~~ad~ii~~S~~~~~~l~~~--~g~---------~i~vi~n~~-~~~f~~~~~--------------- 204 (371)
T PLN02275 152 VRLYRWYERHYGKMADGHLCVTKAMQHELDQN--WGI---------RATVLYDQP-PEFFRPASL--------------- 204 (371)
T ss_pred HHHHHHHHHHHHhhCCEEEECCHHHHHHHHHh--cCC---------CeEEECCCC-HHHcCcCCc---------------
Confidence 00112335777889999999999999998752 232 378999995 455655321
Q ss_pred hHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhh-------------------hCCcEEEEEecCChh
Q 010448 282 KPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI-------------------KENVQIIVLGTGKKP 342 (510)
Q Consensus 282 ~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~-------------------~~~~~l~i~G~g~~~ 342 (510)
. . ++.. +...+++++||+.+.||++.+++|+..+. .++++|+|+|+|+
T Consensus 205 ----~----~--~~~~-~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~-- 271 (371)
T PLN02275 205 ----E----I--RLRP-NRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP-- 271 (371)
T ss_pred ----h----h--cccC-CCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC--
Confidence 0 0 0111 13357889999999999999999998873 2589999999998
Q ss_pred HHHHHHHHHHHCCC-ceEEecc-CCHHHHHHHHHhCcEEEeCC--C-CCCccHHHHHHHHhCCCcEEecCCCccceEEcC
Q 010448 343 MEKQLEQLEILYPE-KARGVAK-FNIPLAHMIIAGADFILIPS--R-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG 417 (510)
Q Consensus 343 ~~~~~~~l~~~~~~-~v~~~~~-~~~~~~~~~~~~adv~v~ps--~-~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~ 417 (510)
.++.+++++.+++. ++.+.++ .+.+++..+|++||++++|+ . .|++|++++||||||+|||+++.||..|++.++
T Consensus 272 ~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g 351 (371)
T PLN02275 272 QKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDG 351 (371)
T ss_pred CHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCC
Confidence 55677777776542 4777664 67888999999999999863 2 388999999999999999999999999999999
Q ss_pred CceeEeccccccCCCCCccCHHHHHHHHHHHH
Q 010448 418 FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 449 (510)
Q Consensus 418 ~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll 449 (510)
.+|+++ + |+++|+++|.+++
T Consensus 352 ~~G~lv----------~--~~~~la~~i~~l~ 371 (371)
T PLN02275 352 KNGLLF----------S--SSSELADQLLELL 371 (371)
T ss_pred CCeEEE----------C--CHHHHHHHHHHhC
Confidence 999997 4 6999999998764
No 63
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.97 E-value=1.3e-29 Score=259.35 Aligned_cols=219 Identities=15% Similarity=0.145 Sum_probs=179.5
Q ss_pred HHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHH
Q 010448 208 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 287 (510)
Q Consensus 208 ~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (510)
+.+..++.+|.|+++|+..++.+.+. ++...+ ++.+++||++...+.+..
T Consensus 176 ~~~~~~~~~d~ii~~S~~~~~~l~~~--~~~~~~------ki~vi~~gv~~~~~~~~~---------------------- 225 (407)
T cd04946 176 LRRYLLSSLDAVFPCSEQGRNYLQKR--YPAYKE------KIKVSYLGVSDPGIISKP---------------------- 225 (407)
T ss_pred HHHHHHhcCCEEEECCHHHHHHHHHH--CCCccc------cEEEEECCcccccccCCC----------------------
Confidence 44566889999999999999998863 343333 789999999976554321
Q ss_pred HHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhC----CcEEEEEecCChhHHHHHHHHHHHCC--CceEEe
Q 010448 288 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE----NVQIIVLGTGKKPMEKQLEQLEILYP--EKARGV 361 (510)
Q Consensus 288 ~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~----~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v~~~ 361 (510)
..++.++++++|++.+.||++.+++|+.++.+. +++++++|+|+ ..+.+++++.+.+ .+|.+.
T Consensus 226 ---------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~--~~~~l~~~~~~~~~~~~V~f~ 294 (407)
T cd04946 226 ---------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGP--LEDTLKELAESKPENISVNFT 294 (407)
T ss_pred ---------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCch--HHHHHHHHHHhcCCCceEEEe
Confidence 112458999999999999999999999999762 56788899887 5566777765433 468888
Q ss_pred ccCCHHHHHHHHHh--CcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCc-cCH
Q 010448 362 AKFNIPLAHMIIAG--ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP-VDV 438 (510)
Q Consensus 362 ~~~~~~~~~~~~~~--adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~-~d~ 438 (510)
+.++.+++..+|+. +|++++||..||+|++++|||+||+|||+|++||..|++.++.+|+++ ++ +|+
T Consensus 295 G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~----------~~~~~~ 364 (407)
T cd04946 295 GELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLL----------SKDPTP 364 (407)
T ss_pred cCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEe----------CCCCCH
Confidence 88888888888875 789999999999999999999999999999999999999999999998 55 589
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHH---hhccCChHHHHHHHH
Q 010448 439 AAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWE 479 (510)
Q Consensus 439 ~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~ 479 (510)
++++++|.+++++ ++.+.++++++ +.++|||+...++|.
T Consensus 365 ~~la~~I~~ll~~--~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFIDN--EEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999999999997 55666666555 578999999988875
No 64
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.97 E-value=2.4e-30 Score=264.66 Aligned_cols=221 Identities=16% Similarity=0.134 Sum_probs=168.6
Q ss_pred HHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHH
Q 010448 208 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 287 (510)
Q Consensus 208 ~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (510)
+++..++.+|.++++|+..++.+.+. .+... .++.+||||+|.+.|.+....
T Consensus 165 ~e~~~~~~ad~vi~~S~~~~~~l~~~--~~~~~------~~v~vipngvd~~~f~~~~~~-------------------- 216 (397)
T TIGR03087 165 YERAIAARFDAATFVSRAEAELFRRL--APEAA------GRITAFPNGVDADFFSPDRDY-------------------- 216 (397)
T ss_pred HHHHHHhhCCeEEEcCHHHHHHHHHh--CCCCC------CCeEEeecccchhhcCCCccc--------------------
Confidence 45778899999999999999998752 12222 279999999999988764320
Q ss_pred HHHHHhCCCCCCCCcEEEEecCcccccChhhHHH----HHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCCCceEEe
Q 010448 288 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAA----AIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 361 (510)
Q Consensus 288 ~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~----a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~ 361 (510)
...++ .++++|+|+|++.+.||++.+++ ++..+.+ ++++|+|+|+|+. +.++++... .+|.+.
T Consensus 217 ----~~~~~--~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~---~~~~~l~~~--~~V~~~ 285 (397)
T TIGR03087 217 ----PNPYP--PGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS---PAVRALAAL--PGVTVT 285 (397)
T ss_pred ----cCCCC--CCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh---HHHHHhccC--CCeEEe
Confidence 00011 24579999999999999999884 4444543 6899999999983 235555433 347777
Q ss_pred ccCCHHHHHHHHHhCcEEEeCCCC-CCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHH
Q 010448 362 AKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 440 (510)
Q Consensus 362 ~~~~~~~~~~~~~~adv~v~ps~~-E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~ 440 (510)
+..+ ++..+|+.||++|+||.. ||+|++++||||||+|||+|+.++. .+...+++|+++ . +|+++
T Consensus 286 G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv----------~-~~~~~ 351 (397)
T TIGR03087 286 GSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLV----------A-ADPAD 351 (397)
T ss_pred eecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEe----------C-CCHHH
Confidence 7766 345799999999999985 9999999999999999999997542 233445678886 5 89999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHH---hhccCChHHHHHHHHHHHH
Q 010448 441 VSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 483 (510)
Q Consensus 441 la~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~~y~ 483 (510)
++++|.+++++ ++.+.++++++ +.++|||+.+++++.++|.
T Consensus 352 la~ai~~ll~~--~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 352 FAAAILALLAN--PAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 99999999998 55555555554 5688999999999999875
No 65
>PHA01633 putative glycosyl transferase group 1
Probab=99.97 E-value=1.6e-28 Score=239.52 Aligned_cols=225 Identities=15% Similarity=0.202 Sum_probs=169.5
Q ss_pred hHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHH
Q 010448 207 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 286 (510)
Q Consensus 207 ~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (510)
++..+.+.+.+.+|++|+..++.+.+ .|++. . .+|+||+|.+.|.+.... .
T Consensus 84 ~~y~~~m~~~~~vIavS~~t~~~L~~---~G~~~-------~-i~I~~GVD~~~f~p~~~~------------------~ 134 (335)
T PHA01633 84 EIVNKYLLQDVKFIPNSKFSAENLQE---VGLQV-------D-LPVFHGINFKIVENAEKL------------------V 134 (335)
T ss_pred HHHHHHHhcCCEEEeCCHHHHHHHHH---hCCCC-------c-eeeeCCCChhhcCccchh------------------h
Confidence 34555666778999999999999986 46552 2 347899999988764310 3
Q ss_pred HHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--C----CcEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 010448 287 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGKKPMEKQLEQLEILYPEKARG 360 (510)
Q Consensus 287 ~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~----~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~ 360 (510)
..++++++.... +.++++++||+.++||++.+++|++++.+ + +++++++|.+ .++++ .++.++.+
T Consensus 135 ~~~r~~~~~~~~-~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~------~~~~l--~l~~~V~f 205 (335)
T PHA01633 135 PQLKQKLDKDFP-DTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK------QFTQL--EVPANVHF 205 (335)
T ss_pred HHHHHHhCcCCC-CCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH------HHHHc--CCCCcEEE
Confidence 456666664322 45799999999999999999999999975 2 3578888732 22322 24456877
Q ss_pred ec---cCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEc------------------CCc
Q 010448 361 VA---KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------------------GFT 419 (510)
Q Consensus 361 ~~---~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~------------------~~~ 419 (510)
.+ ..+.+++..+|++||++|+||.+|+||++++|||+||+|||+++.||++|++.+ .++
T Consensus 206 ~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~ 285 (335)
T PHA01633 206 VAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQ 285 (335)
T ss_pred EecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCc
Confidence 74 335777888999999999999999999999999999999999999999997553 223
Q ss_pred eeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHHhhccCChHHHHHHHHH
Q 010448 420 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 480 (510)
Q Consensus 420 G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ 480 (510)
||++ ++.|+++|+++|..+++..+++.+ .+......++|+|+++.++|++
T Consensus 286 g~~~----------~~~d~~~la~ai~~~~~~~~~~~~-~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 286 KWKI----------HKFQIEDMANAIILAFELQDREER-SMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred eeee----------cCCCHHHHHHHHHHHHhccChhhh-hHHHHHHHHhcCHHHHHHHhhC
Confidence 5554 788999999999999776434333 2222346789999999999863
No 66
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=1.1e-28 Score=252.65 Aligned_cols=208 Identities=16% Similarity=0.121 Sum_probs=159.5
Q ss_pred ccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCC
Q 010448 216 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 295 (510)
Q Consensus 216 ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 295 (510)
||.|+++|..+.+ +.. . .+. ..||||++.|.|... ...++.+|+
T Consensus 499 cD~VIaPS~atq~-L~~---~-----------vI~-nVnGVDte~F~P~~r--------------------~~~~r~lgi 542 (794)
T PLN02501 499 CHKVLRLSAATQD-LPK---S-----------VIC-NVHGVNPKFLKIGEK--------------------VAEERELGQ 542 (794)
T ss_pred CCEEEcCCHHHHH-hcc---c-----------cee-ecccccccccCCcch--------------------hHHHHhcCC
Confidence 8999999977763 321 1 122 227999999987542 122245665
Q ss_pred CCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHH
Q 010448 296 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 373 (510)
Q Consensus 296 ~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 373 (510)
+... ..++|+||+.+.||++.|++|+..+.+ ++++|+|+|+|+ ..+.+++++.+++.++.+.+..+ +...+|
T Consensus 543 ~~~~--kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP--~reeLe~la~eLgL~V~FLG~~d--d~~~ly 616 (794)
T PLN02501 543 QAFS--KGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGE--DAHEVQRAAKRLDLNLNFLKGRD--HADDSL 616 (794)
T ss_pred cccc--CceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCc--cHHHHHHHHHHcCCEEEecCCCC--CHHHHH
Confidence 4322 458999999999999999999998865 589999999998 56678887777665566665543 233699
Q ss_pred HhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhC
Q 010448 374 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 453 (510)
Q Consensus 374 ~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~ 453 (510)
+.+|+||+||.+|+||++++||||||+|||+++.+|. +++.++.+|++ .+|+++++++|.++++++
T Consensus 617 asaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll------------~~D~EafAeAI~~LLsd~- 682 (794)
T PLN02501 617 HGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLT------------YKTSEDFVAKVKEALANE- 682 (794)
T ss_pred HhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEe------------cCCHHHHHHHHHHHHhCc-
Confidence 9999999999999999999999999999999999985 55777888885 379999999999999984
Q ss_pred HHHHHHHHHHHhhccCChHHHHHHHHHHHH
Q 010448 454 TQALAEMMKNGMAQDLSWKGPAKKWEETLL 483 (510)
Q Consensus 454 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 483 (510)
.....+.. ...|||+.+++++++.-+
T Consensus 683 -~~rl~~~a---~~~~SWeAaadrLle~~~ 708 (794)
T PLN02501 683 -PQPLTPEQ---RYNLSWEAATQRFMEYSD 708 (794)
T ss_pred -hhhhHHHH---HhhCCHHHHHHHHHHhhc
Confidence 22222221 348999999999988653
No 67
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.96 E-value=2.4e-28 Score=245.84 Aligned_cols=205 Identities=20% Similarity=0.257 Sum_probs=169.9
Q ss_pred HHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHH
Q 010448 208 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 287 (510)
Q Consensus 208 ~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (510)
+.+..++.+|.++++|+.+++.+.+. ++ .+..+|+||+|.+.|.+...
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~~~~~--~~---------~~~~vi~~~~d~~~~~~~~~--------------------- 193 (351)
T cd03804 146 WDRRSAARVDYFIANSRFVARRIKKY--YG---------RDATVIYPPVDTDRFTPAEE--------------------- 193 (351)
T ss_pred HHHHHhcCCCEEEECCHHHHHHHHHH--hC---------CCcEEECCCCCHhhcCcCCC---------------------
Confidence 34666789999999999999999752 11 15688999999887765321
Q ss_pred HHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHH
Q 010448 288 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 367 (510)
Q Consensus 288 ~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~ 367 (510)
....++|+||+.+.||++.+++|++++ + ++|+|+|+|+ ..+.+++ ....+|.+.+..+.+
T Consensus 194 ------------~~~~il~~G~~~~~K~~~~li~a~~~~--~-~~l~ivG~g~--~~~~l~~---~~~~~V~~~g~~~~~ 253 (351)
T cd03804 194 ------------KEDYYLSVGRLVPYKRIDLAIEAFNKL--G-KRLVVIGDGP--ELDRLRA---KAGPNVTFLGRVSDE 253 (351)
T ss_pred ------------CCCEEEEEEcCccccChHHHHHHHHHC--C-CcEEEEECCh--hHHHHHh---hcCCCEEEecCCCHH
Confidence 235799999999999999999999987 2 8999999997 3444444 344579999999999
Q ss_pred HHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHH
Q 010448 368 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 447 (510)
Q Consensus 368 ~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ 447 (510)
++..+|++||++++||. |+||++++|||+||+|||+++.||..|++.++.+|+++ +++|+++++++|.+
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~----------~~~~~~~la~~i~~ 322 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILF----------EEQTVESLAAAVER 322 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEe----------CCCCHHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999999998 89999999999999
Q ss_pred HHHhhCHHHHHHHHHHHhhccCChHHHHHHH
Q 010448 448 ALATYGTQALAEMMKNGMAQDLSWKGPAKKW 478 (510)
Q Consensus 448 ll~~~~~~~~~~~~~~~~~~~fs~~~~~~~~ 478 (510)
++++++ ....++.++ .++|+|++..+++
T Consensus 323 l~~~~~-~~~~~~~~~--~~~~~~~~~~~~~ 350 (351)
T cd03804 323 FEKNED-FDPQAIRAH--AERFSESRFREKI 350 (351)
T ss_pred HHhCcc-cCHHHHHHH--HHhcCHHHHHHHh
Confidence 999842 233333333 2579999998765
No 68
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.96 E-value=8.6e-28 Score=239.45 Aligned_cols=253 Identities=23% Similarity=0.293 Sum_probs=184.3
Q ss_pred CCCeEEEeccc-hhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCC
Q 010448 126 GEDVVFVANDW-HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 204 (510)
Q Consensus 126 ~pD~iih~h~~-~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (510)
+|| +||+|.. .+.++..+... .++|+|+++|+......... ..
T Consensus 81 ~~d-ii~~~~~~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~~~~---------------------------~~ 124 (353)
T cd03811 81 KPD-VVISHLTTTPNVLALLAAR--------LGTKLIVWEHNSLSLELKRK---------------------------LR 124 (353)
T ss_pred CCC-EEEEcCccchhHHHHHHhh--------cCCceEEEEcCcchhhhccc---------------------------hh
Confidence 499 9999876 33433333322 26899999996543211100 00
Q ss_pred cchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHH
Q 010448 205 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 284 (510)
Q Consensus 205 ~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (510)
.....+..++.+|.++++|+.+.+.+.+. ++.+. .++.+||||+|.+.+.+....
T Consensus 125 ~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--~~~~~------~~~~vi~~~~~~~~~~~~~~~----------------- 179 (353)
T cd03811 125 LLLLIRKLYRRADKIVAVSEGVKEDLLKL--LGIPP------DKIEVIYNPIDIEEIRALAEE----------------- 179 (353)
T ss_pred HHHHHHhhccccceEEEeccchhhhHHHh--hcCCc------cccEEecCCcChhhcCcccch-----------------
Confidence 00245677889999999999999999863 22222 389999999998877654320
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCC--CceEE
Q 010448 285 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARG 360 (510)
Q Consensus 285 ~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v~~ 360 (510)
.. ..+.. .++++++|+|++.+.||++.+++++..+.+ ++++|+++|.++ ....++++..+.+ .++.+
T Consensus 180 --~~---~~~~~--~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~ 250 (353)
T cd03811 180 --PL---ELGIP--PDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGP--LREELEALAKELGLADRVHF 250 (353)
T ss_pred --hh---hcCCC--CCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCc--cHHHHHHHHHhcCCCccEEE
Confidence 00 12222 356899999999999999999999999986 489999999887 3444445555443 35666
Q ss_pred eccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHH
Q 010448 361 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 440 (510)
Q Consensus 361 ~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~ 440 (510)
.+..+ ++..+++.||++++||..|++|++++|||++|+|||+++.||..|++.++.+|+++ +++|.++
T Consensus 251 ~g~~~--~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~~~ 318 (353)
T cd03811 251 LGFQS--NPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLV----------PVGDEAA 318 (353)
T ss_pred ecccC--CHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEE----------CCCCHHH
Confidence 66543 34579999999999999999999999999999999999999999999999999998 8899999
Q ss_pred HH---HHHHHHHHhhCHHHHHHHHH
Q 010448 441 VS---TTVRRALATYGTQALAEMMK 462 (510)
Q Consensus 441 la---~~i~~ll~~~~~~~~~~~~~ 462 (510)
++ +++..+.++ ++.+.+++.
T Consensus 319 ~~~~~~~i~~~~~~--~~~~~~~~~ 341 (353)
T cd03811 319 LAAAALALLDLLLD--PELRERLAA 341 (353)
T ss_pred HHHHHHHHHhccCC--hHHHHHHHH
Confidence 95 455555544 444455544
No 69
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.96 E-value=8.9e-28 Score=248.21 Aligned_cols=311 Identities=15% Similarity=0.181 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCc
Q 010448 96 QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAF 175 (510)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~ 175 (510)
+..|....+..++.+...- +++++||+||++..++|.+++... .+.|+++..|. .||.
T Consensus 111 w~~Y~~vN~~fa~~i~~~~-----------~~~d~iwihDyhl~llp~~lr~~~------~~~~i~~f~Hi-----pfP~ 168 (460)
T cd03788 111 WEAYVRVNRKFADAIAEVL-----------RPGDLVWVHDYHLLLLPQMLRERG------PDARIGFFLHI-----PFPS 168 (460)
T ss_pred HHHHHHHHHHHHHHHHHhc-----------CCCCEEEEeChhhhHHHHHHHhhC------CCCeEEEEEeC-----CCCC
Confidence 3444444555555444432 344499999999999999988754 57899999993 3443
Q ss_pred cch-hhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhh----hh----hc
Q 010448 176 EDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN----II----RK 246 (510)
Q Consensus 176 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~----~~----~~ 246 (510)
... ..+... ..+-..+..+|.|.+.+..+.+.+.+....-+.++. .+ ..
T Consensus 169 ~e~~~~lp~~----------------------~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~ 226 (460)
T cd03788 169 SEIFRCLPWR----------------------EELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRR 226 (460)
T ss_pred hHHHhhCCCh----------------------HHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEE
Confidence 222 111111 123344556888888887666555432110000000 00 12
Q ss_pred CCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhh
Q 010448 247 TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHF 326 (510)
Q Consensus 247 ~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l 326 (510)
.++.++|||||++.|.+... .+..+...++..+.. +++++|+++||+++.||++.+++|++++
T Consensus 227 ~~i~vip~GID~~~f~~~~~---------------~~~~~~~~~~~~~~~--~~~~~il~vgRl~~~Kgi~~ll~A~~~l 289 (460)
T cd03788 227 VRVGAFPIGIDPDAFRKLAA---------------SPEVQERAAELRERL--GGRKLIVGVDRLDYSKGIPERLLAFERL 289 (460)
T ss_pred EEEEEEeCeEcHHHHHHHhc---------------CchhHHHHHHHHHhc--CCCEEEEEecCccccCCHHHHHHHHHHH
Confidence 36899999999988865321 011122233333433 2568999999999999999999999988
Q ss_pred hh--CC----cEEEEEecCC-------hhHHHHHHHHHHHCC--------CceEEe-ccCCHHHHHHHHHhCcEEEeCCC
Q 010448 327 IK--EN----VQIIVLGTGK-------KPMEKQLEQLEILYP--------EKARGV-AKFNIPLAHMIIAGADFILIPSR 384 (510)
Q Consensus 327 ~~--~~----~~l~i~G~g~-------~~~~~~~~~l~~~~~--------~~v~~~-~~~~~~~~~~~~~~adv~v~ps~ 384 (510)
.+ ++ ++|+++|.+. ..+.+.+++++.+.+ ..+.++ +..+.+++..+|+.||++++||.
T Consensus 290 l~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~ 369 (460)
T cd03788 290 LERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPL 369 (460)
T ss_pred HHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCcc
Confidence 75 33 6788887532 235556666554321 124444 45588888899999999999999
Q ss_pred CCCccHHHHHHHHhCCC----cEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHH
Q 010448 385 FEPCGLIQLHAMRYGTV----PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 460 (510)
Q Consensus 385 ~E~~g~~~~Eama~G~P----vv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~ 460 (510)
.||||++++||||||+| ||+|+.+|..+. +.+|+++ +|.|+++++++|.++++++ .+.+.++
T Consensus 370 ~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv----------~p~d~~~la~ai~~~l~~~-~~e~~~~ 435 (460)
T cd03788 370 RDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLV----------NPYDIDEVADAIHRALTMP-LEERRER 435 (460)
T ss_pred ccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHH
Confidence 99999999999999999 999998888776 4689988 9999999999999999974 3444444
Q ss_pred HHHH--hhccCChHHHHHHHHHH
Q 010448 461 MKNG--MAQDLSWKGPAKKWEET 481 (510)
Q Consensus 461 ~~~~--~~~~fs~~~~~~~~~~~ 481 (510)
+++. ...+||++..++++.+-
T Consensus 436 ~~~~~~~v~~~~~~~w~~~~l~~ 458 (460)
T cd03788 436 HRKLREYVRTHDVQAWANSFLDD 458 (460)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHh
Confidence 4433 35789999999988753
No 70
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.96 E-value=1.1e-27 Score=243.04 Aligned_cols=213 Identities=21% Similarity=0.215 Sum_probs=171.5
Q ss_pred HHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHH
Q 010448 211 AGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 290 (510)
Q Consensus 211 ~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (510)
..++.+|.++++|+..++.+.+. ++.. .++.+||||++...+.+...
T Consensus 153 ~~~~~~d~ii~~s~~~~~~l~~~--~~~~-------~~v~~ip~g~~~~~~~~~~~------------------------ 199 (372)
T cd04949 153 ENLDKVDGVIVATEQQKQDLQKQ--FGNY-------NPIYTIPVGSIDPLKLPAQF------------------------ 199 (372)
T ss_pred hChhhCCEEEEccHHHHHHHHHH--hCCC-------CceEEEcccccChhhcccch------------------------
Confidence 34678999999999999988763 2211 15899999999876654210
Q ss_pred HHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCC--CceEEeccCCH
Q 010448 291 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNI 366 (510)
Q Consensus 291 ~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v~~~~~~~~ 366 (510)
.......++++||+.+.||++.+++++.++.+ ++++|+|+|.|+ ....++.+..+.+ +.+.+.+ +.
T Consensus 200 ------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g-~~- 269 (372)
T cd04949 200 ------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGD--EEEKLKELIEELGLEDYVFLKG-YT- 269 (372)
T ss_pred ------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCc--hHHHHHHHHHHcCCcceEEEcC-CC-
Confidence 01244789999999999999999999999976 689999999987 3444555544433 3566655 33
Q ss_pred HHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCC-CccceEEcCCceeEeccccccCCCCCccCHHHHHHHH
Q 010448 367 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 445 (510)
Q Consensus 367 ~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~g-g~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i 445 (510)
+++..+|+.||++++||..|+||++++|||++|+|||+++.+ |..+++.++.+|+++ +++|+++++++|
T Consensus 270 ~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv----------~~~d~~~la~~i 339 (372)
T cd04949 270 RDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLV----------PKGDIEALAEAI 339 (372)
T ss_pred CCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEe----------CCCcHHHHHHHH
Confidence 446679999999999999999999999999999999999987 899999999999998 899999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHh--hccCChHHHHHHH
Q 010448 446 RRALATYGTQALAEMMKNGM--AQDLSWKGPAKKW 478 (510)
Q Consensus 446 ~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~~~~~ 478 (510)
.+++++ ++.+.++++++. .++|||++++++|
T Consensus 340 ~~ll~~--~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 340 IELLND--PKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHcC--HHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 999998 666777776663 6789999998875
No 71
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.96 E-value=1.1e-26 Score=238.19 Aligned_cols=312 Identities=17% Similarity=0.179 Sum_probs=215.9
Q ss_pred HHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCc
Q 010448 96 QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAF 175 (510)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~ 175 (510)
+..|....+..++.+.+.- ++|++|++||+|..++|.+++... +..++.+..| -.||.
T Consensus 107 w~~Y~~vN~~fA~~i~~~~-----------~~~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlH-----ipfP~ 164 (456)
T TIGR02400 107 WEAYRRVNRLFAEALAPLL-----------QPGDIVWVHDYHLMLLPAMLRELG------VQNKIGFFLH-----IPFPS 164 (456)
T ss_pred HHHHHHHHHHHHHHHHHhC-----------CCCCEEEEecchhhHHHHHHHhhC------CCCeEEEEEe-----CCCCC
Confidence 4444444555555544432 355599999999999999999874 5789999999 34443
Q ss_pred cch-hhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCC--CCCchh--hh---hhcC
Q 010448 176 EDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--NI---IRKT 247 (510)
Q Consensus 176 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~--~~---~~~~ 247 (510)
..+ +.+.. ...+-.++..||.|.+.+..+.+.+.+... .|...+ .+ -...
T Consensus 165 ~e~f~~lp~----------------------r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~ 222 (456)
T TIGR02400 165 SEIYRTLPW----------------------RRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTV 222 (456)
T ss_pred hHHHhhCCc----------------------HHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEE
Confidence 221 22211 123455778899999999999988775321 121100 00 0124
Q ss_pred CceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhh
Q 010448 248 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI 327 (510)
Q Consensus 248 ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~ 327 (510)
++.++|||||++.|.+.... +........+|++++ ++++|+++||+++.||++.+++|++++.
T Consensus 223 ~v~viP~GID~~~f~~~~~~------------~~~~~~~~~lr~~~~-----~~~vIl~VgRLd~~KGi~~ll~A~~~ll 285 (456)
T TIGR02400 223 RVGAFPIGIDVDRFAEQAKK------------PSVQKRIAELRESLK-----GRKLIIGVDRLDYSKGLPERLLAFERFL 285 (456)
T ss_pred EEEEecCcCCHHHHHHHhcC------------hhHHHHHHHHHHHcC-----CCeEEEEccccccccCHHHHHHHHHHHH
Confidence 78899999999988654210 011112234566653 5579999999999999999999999986
Q ss_pred h--C----CcEEEEEec-----CC--hhHHHHHHHHHHHCCC--------ceEEe-ccCCHHHHHHHHHhCcEEEeCCCC
Q 010448 328 K--E----NVQIIVLGT-----GK--KPMEKQLEQLEILYPE--------KARGV-AKFNIPLAHMIIAGADFILIPSRF 385 (510)
Q Consensus 328 ~--~----~~~l~i~G~-----g~--~~~~~~~~~l~~~~~~--------~v~~~-~~~~~~~~~~~~~~adv~v~ps~~ 385 (510)
+ + ++.++++|. ++ ..+++.+++++...++ .+.+. +.++.+++..+|++||++++||..
T Consensus 286 ~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~ 365 (456)
T TIGR02400 286 EEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLR 365 (456)
T ss_pred HhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccc
Confidence 5 3 366777752 22 2345556555432111 13333 355788888999999999999999
Q ss_pred CCccHHHHHHHHhCCC----cEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHH
Q 010448 386 EPCGLIQLHAMRYGTV----PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 461 (510)
Q Consensus 386 E~~g~~~~Eama~G~P----vv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~ 461 (510)
||||++++||||||+| +|+|+.+|..+.+. +|+++ +|.|++++|++|.++++++ .+.+.+..
T Consensus 366 EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllV----------nP~d~~~lA~aI~~aL~~~-~~er~~r~ 431 (456)
T TIGR02400 366 DGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLV----------NPYDIDGMADAIARALTMP-LEEREERH 431 (456)
T ss_pred cccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHH
Confidence 9999999999999999 99999999888774 78988 9999999999999999974 33333333
Q ss_pred HHH--hhccCChHHHHHHHHHHH
Q 010448 462 KNG--MAQDLSWKGPAKKWEETL 482 (510)
Q Consensus 462 ~~~--~~~~fs~~~~~~~~~~~y 482 (510)
++. ...+||+...++++++-+
T Consensus 432 ~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 432 RAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred HHHHHHHhhCCHHHHHHHHHHHh
Confidence 222 245699999999987644
No 72
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.94 E-value=1e-24 Score=219.91 Aligned_cols=322 Identities=14% Similarity=0.021 Sum_probs=211.7
Q ss_pred hhHHHHHHHCCCcEEEEeeCCCCcccccCCcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCCCcccCC
Q 010448 7 TKLDSFIQANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGP 86 (510)
Q Consensus 7 ~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~~~~y~~ 86 (510)
-.|+++|+++||+|++++........ .. ...|++++.++.+..... .
T Consensus 19 ~~la~~L~~~g~ev~vv~~~~~~~~~--------------------~~--~~~g~~~~~~~~~~~~~~-------~---- 65 (357)
T PRK00726 19 LALAEELKKRGWEVLYLGTARGMEAR--------------------LV--PKAGIEFHFIPSGGLRRK-------G---- 65 (357)
T ss_pred HHHHHHHHhCCCEEEEEECCCchhhh--------------------cc--ccCCCcEEEEeccCcCCC-------C----
Confidence 47999999999999999976321110 00 114888888765332210 0
Q ss_pred CCCCCCCChHHHHHHHHH---HHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEE
Q 010448 87 RTGEDYQDNQLRFSLLCQ---AALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC 163 (510)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~t 163 (510)
..........+.+ .+.+.+++. +|| |||+|.+.+.+.+.++.+. .++|+|++
T Consensus 66 -----~~~~l~~~~~~~~~~~~~~~~ik~~------------~pD-vv~~~~~~~~~~~~~~~~~-------~~~p~v~~ 120 (357)
T PRK00726 66 -----SLANLKAPFKLLKGVLQARKILKRF------------KPD-VVVGFGGYVSGPGGLAARL-------LGIPLVIH 120 (357)
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHHHhc------------CCC-EEEECCCcchhHHHHHHHH-------cCCCEEEE
Confidence 0001111112222 233333332 599 9999987766665554443 48999998
Q ss_pred ecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhh
Q 010448 164 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI 243 (510)
Q Consensus 164 iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~ 243 (510)
.|+.. + . ...+..++.+|.+++.++..... .+
T Consensus 121 ~~~~~-----~-----------------------------~--~~~r~~~~~~d~ii~~~~~~~~~--------~~---- 152 (357)
T PRK00726 121 EQNAV-----P-----------------------------G--LANKLLARFAKKVATAFPGAFPE--------FF---- 152 (357)
T ss_pred cCCCC-----c-----------------------------c--HHHHHHHHHhchheECchhhhhc--------cC----
Confidence 77321 1 0 11244677899999998844211 12
Q ss_pred hhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHH-HH
Q 010448 244 IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA-AA 322 (510)
Q Consensus 244 ~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li-~a 322 (510)
..++.+++||+|.+.+.+.. .+++++++ ++.++|+++|+....|++..++ +|
T Consensus 153 --~~~i~vi~n~v~~~~~~~~~-----------------------~~~~~~~~--~~~~~i~~~gg~~~~~~~~~~l~~a 205 (357)
T PRK00726 153 --KPKAVVTGNPVREEILALAA-----------------------PPARLAGR--EGKPTLLVVGGSQGARVLNEAVPEA 205 (357)
T ss_pred --CCCEEEECCCCChHhhcccc-----------------------hhhhccCC--CCCeEEEEECCcHhHHHHHHHHHHH
Confidence 22899999999977654321 11234554 2457889999988888876555 89
Q ss_pred HHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCc
Q 010448 323 IPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVP 402 (510)
Q Consensus 323 ~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pv 402 (510)
+.++.+....++++|+|+ .++..+.+ . .+.++.+.+.. ++...+|+.||+++.++- +++++|||++|+|+
T Consensus 206 ~~~~~~~~~~~~~~G~g~--~~~~~~~~-~-~~~~v~~~g~~--~~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~Pv 275 (357)
T PRK00726 206 LALLPEALQVIHQTGKGD--LEEVRAAY-A-AGINAEVVPFI--DDMAAAYAAADLVICRAG----ASTVAELAAAGLPA 275 (357)
T ss_pred HHHhhhCcEEEEEcCCCc--HHHHHHHh-h-cCCcEEEeehH--hhHHHHHHhCCEEEECCC----HHHHHHHHHhCCCE
Confidence 888865335577889887 33333333 3 44345555543 456689999999998762 68999999999999
Q ss_pred EEecCCCc--------cceEEcCCceeEeccccccCCCCCccC--HHHHHHHHHHHHHhhCHHHHHHHHHHHh--hccCC
Q 010448 403 IVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALATYGTQALAEMMKNGM--AQDLS 470 (510)
Q Consensus 403 v~s~~gg~--------~e~v~~~~~G~l~~~~~~~~~~~~~~d--~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fs 470 (510)
|++..++. .+.+.+.++|+++ ++.| +++|+++|.+++++ ++.+.++++++. .+.++
T Consensus 276 v~~~~~~~~~~~~~~~~~~i~~~~~g~~~----------~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~~~ 343 (357)
T PRK00726 276 ILVPLPHAADDHQTANARALVDAGAALLI----------PQSDLTPEKLAEKLLELLSD--PERLEAMAEAARALGKPDA 343 (357)
T ss_pred EEecCCCCCcCcHHHHHHHHHHCCCEEEE----------EcccCCHHHHHHHHHHHHcC--HHHHHHHHHHHHhcCCcCH
Confidence 99876432 3567778899998 7777 99999999999998 666777777663 57788
Q ss_pred hHHHHHHHHHHHH
Q 010448 471 WKGPAKKWEETLL 483 (510)
Q Consensus 471 ~~~~~~~~~~~y~ 483 (510)
.+.+++.+.++..
T Consensus 344 ~~~~~~~~~~~~~ 356 (357)
T PRK00726 344 AERLADLIEELAR 356 (357)
T ss_pred HHHHHHHHHHHhh
Confidence 8888888877653
No 73
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.93 E-value=4.1e-24 Score=214.96 Aligned_cols=246 Identities=13% Similarity=0.038 Sum_probs=170.4
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| +||+|.....+...++.+. .++|++++.|+.. + .
T Consensus 89 ~pD-vI~~~~~~~~~~~~~~a~~-------~~~p~v~~~~~~~-----~-----------------------------~- 125 (350)
T cd03785 89 KPD-VVVGFGGYVSGPVGLAAKL-------LGIPLVIHEQNAV-----P-----------------------------G- 125 (350)
T ss_pred CCC-EEEECCCCcchHHHHHHHH-------hCCCEEEEcCCCC-----c-----------------------------c-
Confidence 599 9999876555444444433 4789998766321 1 0
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
...+..++.+|.|+++|+...+.+ + ..++.+|+||+|.+.+.+.
T Consensus 126 -~~~~~~~~~~~~vi~~s~~~~~~~--------~------~~~~~~i~n~v~~~~~~~~--------------------- 169 (350)
T cd03785 126 -LANRLLARFADRVALSFPETAKYF--------P------KDKAVVTGNPVREEILALD--------------------- 169 (350)
T ss_pred -HHHHHHHHhhCEEEEcchhhhhcC--------C------CCcEEEECCCCchHHhhhh---------------------
Confidence 112345667999999999887751 1 1279999999997765431
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChh-hHHHHHHhhhhCCcEE-EEEecCChhHHHHHHHHHHHCCCceEEecc
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSD-ILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAK 363 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~-~li~a~~~l~~~~~~l-~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~ 363 (510)
.. +++++++ ++.++++++|+....|+.+ .+++++..+.++++++ +++|+|. .+.+++...+++.++.+.+.
T Consensus 170 -~~-~~~~~~~--~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~---~~~l~~~~~~~~~~v~~~g~ 242 (350)
T cd03785 170 -RE-RARLGLR--PGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD---LEEVKKAYEELGVNYEVFPF 242 (350)
T ss_pred -hh-HHhcCCC--CCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc---HHHHHHHHhccCCCeEEeeh
Confidence 11 5666765 3457888888777777765 4568888886556664 4778774 24455555544456777665
Q ss_pred CCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC--------ccceEEcCCceeEeccccccCCCCCc
Q 010448 364 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDP 435 (510)
Q Consensus 364 ~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg--------~~e~v~~~~~G~l~~~~~~~~~~~~~ 435 (510)
. +++..+|+.||+++.+|- +++++|||++|+|||+++.++ ..+.+.++++|+++ ++
T Consensus 243 ~--~~~~~~l~~ad~~v~~sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v----------~~ 306 (350)
T cd03785 243 I--DDMAAAYAAADLVISRAG----ASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLI----------PQ 306 (350)
T ss_pred h--hhHHHHHHhcCEEEECCC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEE----------ec
Confidence 4 566689999999998762 689999999999999987654 23566677899998 66
Q ss_pred c--CHHHHHHHHHHHHHhhCHHHHHHHHHHHh--hccCChHHHH
Q 010448 436 V--DVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPA 475 (510)
Q Consensus 436 ~--d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~~ 475 (510)
. |+++++++|..++++ ++.+.++++++. .+.+.-++++
T Consensus 307 ~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~~~~~~i~ 348 (350)
T cd03785 307 EELTPERLAAALLELLSD--PERLKAMAEAARSLARPDAAERIA 348 (350)
T ss_pred CCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHhcCCCCHHHHHH
Confidence 6 899999999999987 677777777763 3455555554
No 74
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.93 E-value=7.9e-26 Score=213.89 Aligned_cols=204 Identities=36% Similarity=0.617 Sum_probs=149.7
Q ss_pred hhhhhHHHHHHHCCCcEEEEeeCCCCccccc-CCcEEEEE--------EeCCeEEEEEEEEEeeCCceEEEEeCcccccc
Q 010448 4 ASSTKLDSFIQANGHRVMTIAPRYDQYKDAW-DTDVVIEL--------KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAK 74 (510)
Q Consensus 4 ~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~ 74 (510)
..+..|+++|+++||+|+|++|.|+...... ......++ .+.. ....++++...+||++++++.+.+..+
T Consensus 20 dv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~v~~~~~~~v~v~~i~~~~~f~r 98 (245)
T PF08323_consen 20 DVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGV-WYEVRVYRYPVDGVPVYFIDNPEYFDR 98 (245)
T ss_dssp HHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE-----EEEEEEEETTEEEEEEESHHHHGS
T ss_pred HHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEecccccccccccc-ceEEEEEEEEcCCccEEEecChhhccc
Confidence 4678999999999999999999998665553 12222221 1111 145677888889999999999998863
Q ss_pred ccCCCCCcccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCC
Q 010448 75 VWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM 154 (510)
Q Consensus 75 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~ 154 (510)
..+|++. +.+|.++..||++|++++++.++.++. +|| |||+|||+++++|.+++..+.....
T Consensus 99 ------~~iY~~~-~~~~~d~~~rf~~fs~a~le~~~~l~~----------~pD-IIH~hDW~tal~p~~lk~~~~~~~~ 160 (245)
T PF08323_consen 99 ------PGIYGDN-GGDYPDNAERFAFFSRAALELLKKLGW----------KPD-IIHCHDWHTALAPLYLKERYQQDPF 160 (245)
T ss_dssp ------SSSSBST-SSBHTTHHHHHHHHHHHHHHHHCTCT-----------S-S-EEEEECGGGTTHHHHHHHCCSS---
T ss_pred ------cceeccC-CCcchhHHHHHHHHHHHHHHHHHhhCC----------CCC-EEEecCchHHHHHHHhccccccccc
Confidence 5699876 778999999999999999999998754 499 9999999999999999998765555
Q ss_pred CCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhc
Q 010448 155 YKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVS 232 (510)
Q Consensus 155 ~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~ 232 (510)
+.++|+|+|+||+.++|.++...+..++++...+.... ...+...+++++.++..||.|+|||+.+++++++
T Consensus 161 ~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~------~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 161 FANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLD------EYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp ---SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STT------TTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred cccceeEEEEcccccCCcCCHHHHHHcCCCHHHhcccc------ccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 67899999999999999998877777777754321111 1123457899999999999999999999999986
No 75
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.93 E-value=3.9e-24 Score=232.37 Aligned_cols=319 Identities=16% Similarity=0.205 Sum_probs=217.2
Q ss_pred HHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCc
Q 010448 96 QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAF 175 (510)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~ 175 (510)
|..|....+..++.+.+.- ++|++|..||+|..++|.+++.+. +++++.|..| -.||.
T Consensus 127 w~~Y~~vN~~FA~~i~~~~-----------~~~d~vWvhDYhL~llp~~lR~~~------~~~~igfFlH-----iPFPs 184 (797)
T PLN03063 127 YDAYKKANRMFLDVVKENY-----------EEGDVVWCHDYHLMFLPQYLKEYN------NKMKVGWFLH-----TPFPS 184 (797)
T ss_pred HHHHHHHHHHHHHHHHHhc-----------CCCCEEEEecchhhhHHHHHHHhC------CCCcEEEEec-----CCCCC
Confidence 4444444555555444432 355699999999999999999875 6899999999 44554
Q ss_pred cch-hhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCC--CCCch--hhhh---hcC
Q 010448 176 EDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNII---RKT 247 (510)
Q Consensus 176 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~--~~~~---~~~ 247 (510)
..+ +.+... .-+-.++..||.|-+.+..+.+.+.+... .|... ..+. ...
T Consensus 185 ~e~fr~lp~r----------------------~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~ 242 (797)
T PLN03063 185 SEIYKTLPSR----------------------SELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVT 242 (797)
T ss_pred HHHHhhCCCH----------------------HHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEE
Confidence 332 222211 22344567788888888888877664211 11110 0000 113
Q ss_pred CceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhh
Q 010448 248 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI 327 (510)
Q Consensus 248 ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~ 327 (510)
++.++|||||++.|.+.... +........+++.++ ++++|+++||+++.||++.+++|++++.
T Consensus 243 ~I~viP~GID~~~f~~~~~~------------~~~~~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Afe~lL 305 (797)
T PLN03063 243 RVAVFPIGIDPERFINTCEL------------PEVKQHMKELKRFFA-----GRKVILGVDRLDMIKGIPQKYLAFEKFL 305 (797)
T ss_pred EEEEEecccCHHHHHHHhcC------------hhHHHHHHHHHHhcC-----CCeEEEEecccccccCHHHHHHHHHHHH
Confidence 68899999998887643210 001111224444443 4579999999999999999999999987
Q ss_pred h--CC----cEEEEEec-----CC--hhHHHHHHHHHHHCCCc--------eEEe-ccCCHHHHHHHHHhCcEEEeCCCC
Q 010448 328 K--EN----VQIIVLGT-----GK--KPMEKQLEQLEILYPEK--------ARGV-AKFNIPLAHMIIAGADFILIPSRF 385 (510)
Q Consensus 328 ~--~~----~~l~i~G~-----g~--~~~~~~~~~l~~~~~~~--------v~~~-~~~~~~~~~~~~~~adv~v~ps~~ 385 (510)
+ |+ +.|++++. ++ ..+++.+.++....+++ +.+. ..++.+++..+|+.||++++||..
T Consensus 306 ~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlr 385 (797)
T PLN03063 306 EENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLR 385 (797)
T ss_pred HhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccc
Confidence 5 44 44554432 22 23445555554322111 2222 245778888999999999999999
Q ss_pred CCccHHHHHHHHhCCC----cEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHH
Q 010448 386 EPCGLIQLHAMRYGTV----PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 461 (510)
Q Consensus 386 E~~g~~~~Eama~G~P----vv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~ 461 (510)
||+|++++||||||+| +|+|..+|..+.+ +.+|+++ +|.|++++|++|.++++.+ ++++++..
T Consensus 386 EGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allV----------nP~D~~~lA~AI~~aL~m~-~~er~~r~ 452 (797)
T PLN03063 386 DGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLV----------NPWNITEVSSAIKEALNMS-DEERETRH 452 (797)
T ss_pred cccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHH
Confidence 9999999999999999 9999999998876 4578988 9999999999999999963 33333333
Q ss_pred HHH--hhccCChHHHHHHHHHHHHHHHHc
Q 010448 462 KNG--MAQDLSWKGPAKKWEETLLNLEVA 488 (510)
Q Consensus 462 ~~~--~~~~fs~~~~~~~~~~~y~~l~~~ 488 (510)
++. ...+++|...++.+++.+++....
T Consensus 453 ~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~ 481 (797)
T PLN03063 453 RHNFQYVKTHSAQKWADDFMSELNDIIVE 481 (797)
T ss_pred HHHHHhhhhCCHHHHHHHHHHHHHHHhhh
Confidence 322 467899999999999988877643
No 76
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=2.3e-23 Score=209.38 Aligned_cols=231 Identities=13% Similarity=0.044 Sum_probs=159.2
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| +||+|.+...+.+.++.+. .++|+|+..|+.. + .
T Consensus 90 ~pD-vVi~~~~~~~~~~~~~~~~-------~~~p~v~~~~~~~-----~-----------------------------~- 126 (348)
T TIGR01133 90 KPD-AVIGFGGYVSGPAGLAAKL-------LGIPLFHHEQNAV-----P-----------------------------G- 126 (348)
T ss_pred CCC-EEEEcCCcccHHHHHHHHH-------cCCCEEEECCCCC-----c-----------------------------c-
Confidence 599 9999976555554444433 4788886544211 0 0
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
...+..++.+|.++++|+.+.+.+ +..+|+||+|...+.+..
T Consensus 127 -~~~~~~~~~~d~ii~~~~~~~~~~-----------------~~~~i~n~v~~~~~~~~~-------------------- 168 (348)
T TIGR01133 127 -LTNKLLSRFAKKVLISFPGAKDHF-----------------EAVLVGNPVRQEIRSLPV-------------------- 168 (348)
T ss_pred -HHHHHHHHHhCeeEECchhHhhcC-----------------CceEEcCCcCHHHhcccc--------------------
Confidence 112456778999999999887654 247899999876554321
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhh-HHHHHHhhhhCCcEEEEE-ecCChhHHHHHHHHHHHCCC-ceEEec
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPE-KARGVA 362 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~-li~a~~~l~~~~~~l~i~-G~g~~~~~~~~~~l~~~~~~-~v~~~~ 362 (510)
.+++++++ ++.++|+++|+....|++.. +++++..+.+.+.+++++ |++. . +.+++...+++. ++..
T Consensus 169 ---~~~~~~~~--~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~~--~-~~l~~~~~~~~l~~~v~-- 238 (348)
T TIGR01133 169 ---PRERFGLR--EGKPTILVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKND--L-EKVKNVYQELGIEAIVT-- 238 (348)
T ss_pred ---hhhhcCCC--CCCeEEEEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcch--H-HHHHHHHhhCCceEEec--
Confidence 02245665 35578999998888888654 558888886656666544 4443 2 456666655542 2222
Q ss_pred cCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC-------ccceEEcCCceeEeccccccCCCCCc
Q 010448 363 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-------LVDTVEEGFTGFQMGSFSVDCEAVDP 435 (510)
Q Consensus 363 ~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg-------~~e~v~~~~~G~l~~~~~~~~~~~~~ 435 (510)
+...+...+|+.||++|.++ + +++++|||++|+|+|+++.++ ..+++.++++|+++ ++
T Consensus 239 -~~~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~----------~~ 303 (348)
T TIGR01133 239 -FIDENMAAAYAAADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVI----------RQ 303 (348)
T ss_pred -CcccCHHHHHHhCCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEE----------ec
Confidence 22225668999999999865 2 789999999999999998754 23567788899988 77
Q ss_pred cC--HHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 010448 436 VD--VAAVSTTVRRALATYGTQALAEMMKNG 464 (510)
Q Consensus 436 ~d--~~~la~~i~~ll~~~~~~~~~~~~~~~ 464 (510)
+| +++++++|.+++++ ++.+.++++++
T Consensus 304 ~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~ 332 (348)
T TIGR01133 304 KELLPEKLLEALLKLLLD--PANLEAMAEAA 332 (348)
T ss_pred ccCCHHHHHHHHHHHHcC--HHHHHHHHHHH
Confidence 65 99999999999987 67777777766
No 77
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.92 E-value=7.1e-23 Score=207.43 Aligned_cols=222 Identities=16% Similarity=0.164 Sum_probs=161.4
Q ss_pred hHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHH
Q 010448 207 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 286 (510)
Q Consensus 207 ~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (510)
..++..++.||.|+++|+.+.+.+.+ ++ + ++.+||||+|.+.|.+.... .
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~---~~-~--------~i~~i~ngvd~~~f~~~~~~------------------~ 194 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR---LN-P--------NVVLVPNGVDYEHFAAARDP------------------P 194 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh---CC-C--------CEEEcccccCHHHhhccccc------------------C
Confidence 45788899999999999999998876 33 2 79999999999888664321 0
Q ss_pred HHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCH
Q 010448 287 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 366 (510)
Q Consensus 287 ~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~ 366 (510)
...+...+ .+.++++|+|++.+.++++.+.++++.. ++++|+++|+++... ....+. . ..+|.+.+..+.
T Consensus 195 ~~~~~~~~----~~~~~i~y~G~l~~~~d~~ll~~la~~~--p~~~~vliG~~~~~~--~~~~~~-~-~~nV~~~G~~~~ 264 (373)
T cd04950 195 PPPADLAA----LPRPVIGYYGAIAEWLDLELLEALAKAR--PDWSFVLIGPVDVSI--DPSALL-R-LPNVHYLGPKPY 264 (373)
T ss_pred CChhHHhc----CCCCEEEEEeccccccCHHHHHHHHHHC--CCCEEEEECCCcCcc--ChhHhc-c-CCCEEEeCCCCH
Confidence 00001111 2558999999999988887776665543 789999999983111 111111 1 246999999998
Q ss_pred HHHHHHHHhCcEEEeCCCC-----CCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHH
Q 010448 367 PLAHMIIAGADFILIPSRF-----EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 441 (510)
Q Consensus 367 ~~~~~~~~~adv~v~ps~~-----E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~l 441 (510)
+++..+++.+|++++|+.. +++|++++||||||+|||+++.+++ +.....+++ .++|++++
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~-----------~~~d~~~~ 330 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVL-----------IADDPEEF 330 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEE-----------eCCCHHHH
Confidence 9999999999999999864 3689999999999999999986554 444443444 46799999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Q 010448 442 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 484 (510)
Q Consensus 442 a~~i~~ll~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~ 484 (510)
+++|.+++.+...+...+ ..+ +.+.|||+..++++.+.+++
T Consensus 331 ~~ai~~~l~~~~~~~~~~-~~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 331 VAAIEKALLEDGPARERR-RLR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHhcCCchHHHH-HHH-HHHHCCHHHHHHHHHHHHHh
Confidence 999999877643333222 222 67789999999999866554
No 78
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.91 E-value=1.7e-23 Score=227.98 Aligned_cols=317 Identities=16% Similarity=0.199 Sum_probs=214.5
Q ss_pred HHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCc
Q 010448 96 QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAF 175 (510)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~ 175 (510)
+..|....+..++.+...- ++|++|..||+|..++|.+++.+. +..++-|..| -.||.
T Consensus 113 w~~Y~~vN~~fA~~~~~~~-----------~~~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlH-----~pfP~ 170 (726)
T PRK14501 113 WESYERVNQRFAEAIAAIA-----------RPGDVVWVHDYQLMLLPAMLRERL------PDARIGFFLH-----IPFPS 170 (726)
T ss_pred HHHHHHHHHHHHHHHHHhc-----------CCCCEEEEeCchhhhHHHHHHhhC------CCCcEEEEee-----CCCCC
Confidence 3444444555555544432 355599999999999999998764 6789999999 34444
Q ss_pred cch-hhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCC--CCCchhh-hh----hcC
Q 010448 176 EDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-II----RKT 247 (510)
Q Consensus 176 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~-~~----~~~ 247 (510)
..+ +.+... .-+-..+..+|.|-..+..+.+.+.+... .|.+... .+ +..
T Consensus 171 ~~~f~~lp~~----------------------~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~ 228 (726)
T PRK14501 171 FEVFRLLPWR----------------------EEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIV 228 (726)
T ss_pred hHHHhhCCCh----------------------HHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEE
Confidence 332 222211 22344667788888888887776554211 1111000 00 113
Q ss_pred CceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhh
Q 010448 248 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI 327 (510)
Q Consensus 248 ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~ 327 (510)
++.++|||||++.|.+.... +........+++.++ ++++|+++||+++.||+..+++|++++.
T Consensus 229 ~v~v~p~GID~~~f~~~~~~------------~~~~~~~~~lr~~~~-----~~~~il~VgRl~~~Kgi~~~l~A~~~ll 291 (726)
T PRK14501 229 RVDAFPMGIDYDKFHNSAQD------------PEVQEEIRRLRQDLR-----GRKIILSIDRLDYTKGIPRRLLAFERFL 291 (726)
T ss_pred EEEEEECeEcHHHHHHHhcC------------chHHHHHHHHHHHcC-----CCEEEEEecCcccccCHHHHHHHHHHHH
Confidence 68999999999988654210 001111233444432 5579999999999999999999999986
Q ss_pred h--C----CcEEEEEecC-----C--hhHHHHHHHHHHHCC----C----ceE-EeccCCHHHHHHHHHhCcEEEeCCCC
Q 010448 328 K--E----NVQIIVLGTG-----K--KPMEKQLEQLEILYP----E----KAR-GVAKFNIPLAHMIIAGADFILIPSRF 385 (510)
Q Consensus 328 ~--~----~~~l~i~G~g-----~--~~~~~~~~~l~~~~~----~----~v~-~~~~~~~~~~~~~~~~adv~v~ps~~ 385 (510)
+ + +++|+++|.+ + .++++.+.+++.+.+ . .+. +.+.++.+++..+|+.||++++||..
T Consensus 292 ~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~ 371 (726)
T PRK14501 292 EKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLR 371 (726)
T ss_pred HhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccc
Confidence 5 3 4788888733 1 234555555544321 1 133 44567888888999999999999999
Q ss_pred CCccHHHHHHHHhC-----CCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHH-
Q 010448 386 EPCGLIQLHAMRYG-----TVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE- 459 (510)
Q Consensus 386 E~~g~~~~Eama~G-----~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~- 459 (510)
||||++++|||||| +||++...|+..+++ .|+++ +|.|+++++++|.++++++..+....
T Consensus 372 EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv----------~P~d~~~la~ai~~~l~~~~~e~~~r~ 437 (726)
T PRK14501 372 DGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLV----------NPNDIEGIAAAIKRALEMPEEEQRERM 437 (726)
T ss_pred cccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHH
Confidence 99999999999994 466666678777764 38888 99999999999999998742332222
Q ss_pred -HHHHHhhccCChHHHHHHHHHHHHHHHHc
Q 010448 460 -MMKNGMAQDLSWKGPAKKWEETLLNLEVA 488 (510)
Q Consensus 460 -~~~~~~~~~fs~~~~~~~~~~~y~~l~~~ 488 (510)
..++ ...+|||+..++++.+.|+++...
T Consensus 438 ~~~~~-~v~~~~~~~w~~~~l~~l~~~~~~ 466 (726)
T PRK14501 438 QAMQE-RLRRYDVHKWASDFLDELREAAEK 466 (726)
T ss_pred HHHHH-HHHhCCHHHHHHHHHHHHHHHHhh
Confidence 2222 246899999999999999988653
No 79
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.91 E-value=7e-23 Score=211.39 Aligned_cols=232 Identities=17% Similarity=0.161 Sum_probs=163.2
Q ss_pred hHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHH
Q 010448 207 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 286 (510)
Q Consensus 207 ~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (510)
.+.+..++.+|.|+++|+..++.+.+ .|++ .. +.+++|+ +.+.+.+.. .....
T Consensus 170 ~~~r~~~~~~d~ii~~S~~~~~~l~~---~g~~------~~-i~vi~n~-~~d~~~~~~----------------~~~~~ 222 (425)
T PRK05749 170 RFYRLLFKNIDLVLAQSEEDAERFLA---LGAK------NE-VTVTGNL-KFDIEVPPE----------------LAARA 222 (425)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCC------CC-cEecccc-cccCCCChh----------------hHHHH
Confidence 34577888999999999999999986 5654 22 7788884 333222111 11123
Q ss_pred HHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCCCc-eEE---
Q 010448 287 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEK-ARG--- 360 (510)
Q Consensus 287 ~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~~~-v~~--- 360 (510)
..+++.++ + +.++++++|+. .|+.+.+++|+.++.+ ++++|+|+|+|++. .+.++++..+.+.. +.+
T Consensus 223 ~~~r~~~~-~---~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r-~~~l~~~~~~~gl~~~~~~~~ 295 (425)
T PRK05749 223 ATLRRQLA-P---NRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPER-FKEVEELLKKAGLSYVRRSQG 295 (425)
T ss_pred HHHHHHhc-C---CCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChhh-HHHHHHHHHhCCCcEEEccCC
Confidence 45666676 3 44788888874 6789999999999865 78999999998732 24566666554421 111
Q ss_pred ----------eccCCHHHHHHHHHhCcEEEe-CCCCCCccHHHHHHHHhCCCcEEecC-CCccceEEcC-CceeEecccc
Q 010448 361 ----------VAKFNIPLAHMIIAGADFILI-PSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEG-FTGFQMGSFS 427 (510)
Q Consensus 361 ----------~~~~~~~~~~~~~~~adv~v~-ps~~E~~g~~~~Eama~G~Pvv~s~~-gg~~e~v~~~-~~G~l~~~~~ 427 (510)
.+. ...++..+|+.||++++ +|..|++|.+++|||+||+|||+++. ++..++++.. .+|+++
T Consensus 296 ~~~~~~~~v~l~~-~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~---- 370 (425)
T PRK05749 296 EPPSADTDVLLGD-TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAI---- 370 (425)
T ss_pred CCCCCCCcEEEEe-cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeE----
Confidence 111 23466689999999655 67779999999999999999999864 5566655542 467776
Q ss_pred ccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHHh---hccCChHHHHHHHHHHHHHHHHc
Q 010448 428 VDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKGPAKKWEETLLNLEVA 488 (510)
Q Consensus 428 ~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~---~~~fs~~~~~~~~~~~y~~l~~~ 488 (510)
.++|+++++++|.+++++ ++.+.++++++. .++ ....+++.+++++.+.+
T Consensus 371 ------~~~d~~~La~~l~~ll~~--~~~~~~m~~~a~~~~~~~---~~~~~~~~~~l~~~l~~ 423 (425)
T PRK05749 371 ------QVEDAEDLAKAVTYLLTD--PDARQAYGEAGVAFLKQN---QGALQRTLQLLEPYLPP 423 (425)
T ss_pred ------EECCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhC---ccHHHHHHHHHHHhccc
Confidence 789999999999999998 666667776653 232 46667777777766543
No 80
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.90 E-value=2.7e-21 Score=196.72 Aligned_cols=221 Identities=13% Similarity=0.091 Sum_probs=160.3
Q ss_pred HHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHH
Q 010448 213 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 292 (510)
Q Consensus 213 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (510)
++.+|.++++|+...+.+.+ .|++.+ ++.++.|.++.. |.+... ...++++
T Consensus 145 ~~~ad~i~~~s~~~~~~l~~---~gi~~~------ki~v~G~p~~~~-f~~~~~-------------------~~~~~~~ 195 (380)
T PRK13609 145 HREVDRYFVATDHVKKVLVD---IGVPPE------QVVETGIPIRSS-FELKIN-------------------PDIIYNK 195 (380)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCChh------HEEEECcccChH-HcCcCC-------------------HHHHHHH
Confidence 55799999999999999987 677655 777776655432 322111 3346788
Q ss_pred hCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHH
Q 010448 293 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 372 (510)
Q Consensus 293 ~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~ 372 (510)
+|++.+ ...++++.|++...|+++.+++++.+. ++++++++|.+++.+.+.++++....+.++.+.+..+ .+.++
T Consensus 196 ~~l~~~-~~~il~~~G~~~~~k~~~~li~~l~~~--~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~--~~~~l 270 (380)
T PRK13609 196 YQLCPN-KKILLIMAGAHGVLGNVKELCQSLMSV--PDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVE--NIDEL 270 (380)
T ss_pred cCCCCC-CcEEEEEcCCCCCCcCHHHHHHHHhhC--CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechh--hHHHH
Confidence 888743 234566778898899999999988654 6899888764444456777777766655687776543 35679
Q ss_pred HHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEec-CCCcc----ceEEcCCceeEeccccccCCCCCccCHHHHHHHHHH
Q 010448 373 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLV----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 447 (510)
Q Consensus 373 ~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~-~gg~~----e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ 447 (510)
|+.||+++. ++.|++++|||+||+|||+++ .+|.. +.+.+ +|+.+ ...|+++++++|.+
T Consensus 271 ~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~----------~~~~~~~l~~~i~~ 334 (380)
T PRK13609 271 FRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAV----------VIRDDEEVFAKTEA 334 (380)
T ss_pred HHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEE----------EECCHHHHHHHHHH
Confidence 999999884 567999999999999999986 55532 22322 34444 45899999999999
Q ss_pred HHHhhCHHHHHHHHHHH--hhccCChHHHHHHHHHHHHHH
Q 010448 448 ALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 485 (510)
Q Consensus 448 ll~~~~~~~~~~~~~~~--~~~~fs~~~~~~~~~~~y~~l 485 (510)
++++ ++.+.++++++ ....++++.+++.+.+++...
T Consensus 335 ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 335 LLQD--DMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred HHCC--HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 9998 66677777665 356689999999998877543
No 81
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.89 E-value=3.9e-22 Score=179.38 Aligned_cols=164 Identities=27% Similarity=0.444 Sum_probs=138.7
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhh---hCCcEEEEEecCChhHHHHHHHHHHHCC--CceEE
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI---KENVQIIVLGTGKKPMEKQLEQLEILYP--EKARG 360 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~---~~~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v~~ 360 (510)
++..+...+.+ .++++|+|+||+.+.||++.+++++..+. .++++++|+|.+. ....+.......+ .++.+
T Consensus 2 ~~~~~~~~~~~--~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 2 KDKLREKLKIP--DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE--YKKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp HHHHHHHTTT---TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC--HHHHHHHHHHHTTCGTTEEE
T ss_pred hHHHHHHcCCC--CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc--cccccccccccccccccccc
Confidence 45566666665 35689999999999999999999999997 4799999999777 5555666665543 47888
Q ss_pred eccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHH
Q 010448 361 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 440 (510)
Q Consensus 361 ~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~ 440 (510)
.+..+.+++..+|+.||++++||..|++|++++|||++|+|||+++.|+..|++.++.+|+++ ++.|+++
T Consensus 78 ~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~ 147 (172)
T PF00534_consen 78 LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLF----------DPNDIEE 147 (172)
T ss_dssp EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEE----------STTSHHH
T ss_pred cccccccccccccccceeccccccccccccccccccccccceeeccccCCceeeccccceEEe----------CCCCHHH
Confidence 888888888899999999999999999999999999999999999999999999999999999 8889999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHh
Q 010448 441 VSTTVRRALATYGTQALAEMMKNGM 465 (510)
Q Consensus 441 la~~i~~ll~~~~~~~~~~~~~~~~ 465 (510)
++++|.+++++ ++.+..+++++.
T Consensus 148 l~~~i~~~l~~--~~~~~~l~~~~~ 170 (172)
T PF00534_consen 148 LADAIEKLLND--PELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHCC--HHHHHHHHHHhc
Confidence 99999999999 577777777653
No 82
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.89 E-value=3e-21 Score=196.80 Aligned_cols=313 Identities=16% Similarity=0.150 Sum_probs=221.1
Q ss_pred HHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCc
Q 010448 96 QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAF 175 (510)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~ 175 (510)
+..+....+..++.+...- ++|++|..||+|..++|.+++.+. ++.++-|-.| -.||.
T Consensus 112 w~~Y~~vN~~FA~~i~~~~-----------~~~d~vWVhDYhL~llp~~LR~~~------~~~~IgfFlH-----iPFPs 169 (487)
T TIGR02398 112 WQVFLKVNRAFAEAACLEA-----------AEGATVWVHDYNLWLVPGYIRQLR------PDLKIAFFHH-----TPFPS 169 (487)
T ss_pred HHHHHHHHHHHHHHHHHhc-----------CCCCEEEEecchhhHHHHHHHHhC------CCCeEEEEee-----CCCCC
Confidence 4444444555555444432 356699999999999999999864 5789999999 34554
Q ss_pred cch-hhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCC--CCCchhhh---------
Q 010448 176 EDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDNI--------- 243 (510)
Q Consensus 176 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~~--------- 243 (510)
..+ +.+... .-+-.++..||.|-+.+..+.+.+.+... .|......
T Consensus 170 ~eifr~LP~r----------------------~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~ 227 (487)
T TIGR02398 170 ADVFNILPWR----------------------EQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFIT 227 (487)
T ss_pred hHHHhhCCch----------------------HHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCcccccccccccccc
Confidence 332 222211 23445677899999999998887765221 12111000
Q ss_pred -------------h----hcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEE
Q 010448 244 -------------I----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 306 (510)
Q Consensus 244 -------------~----~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~ 306 (510)
+ +..++.++|.|||++.|.+.... +........+|++++ ++.+|++
T Consensus 228 ~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~------------~~~~~~~~~lr~~~~-----~~kiIl~ 290 (487)
T TIGR02398 228 VGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAA------------ASIREMMERIRSELA-----GVKLILS 290 (487)
T ss_pred ccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcC------------chHHHHHHHHHHHcC-----CceEEEE
Confidence 0 11247899999999988553210 111223456788777 4579999
Q ss_pred ecCcccccChhhHHHHHHhhhh--C----CcEEEEEecCC-------hhHHHHHHHHHHHCCC---------ceEEeccC
Q 010448 307 IGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK-------KPMEKQLEQLEILYPE---------KARGVAKF 364 (510)
Q Consensus 307 ~Grl~~~Kg~~~li~a~~~l~~--~----~~~l~i~G~g~-------~~~~~~~~~l~~~~~~---------~v~~~~~~ 364 (510)
++|+++.||+...++|++++.+ | +++|+++|.+. .++++++++++.+.++ .+.+...+
T Consensus 291 VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v 370 (487)
T TIGR02398 291 AERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSL 370 (487)
T ss_pred ecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCC
Confidence 9999999999999999999865 3 57999998753 2456667776655321 13455666
Q ss_pred CHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCC----CcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHH
Q 010448 365 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 440 (510)
Q Consensus 365 ~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~----Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~ 440 (510)
+.+++..+|+.||++++||..||++++..|+++|+. |+|.|..+|..+.+. .++++ +|.|+++
T Consensus 371 ~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~l~---~AllV----------NP~d~~~ 437 (487)
T TIGR02398 371 PYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVELK---GALLT----------NPYDPVR 437 (487)
T ss_pred CHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccchhhcC---CCEEE----------CCCCHHH
Confidence 888888999999999999999999999999999988 999999999987763 46777 9999999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHH-hhccCChHHHHHHHHHHH
Q 010448 441 VSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETL 482 (510)
Q Consensus 441 la~~i~~ll~~~~~~~~~~~~~~~-~~~~fs~~~~~~~~~~~y 482 (510)
+|++|.++++.+..+...++.+.. ...+++....++.+.+-+
T Consensus 438 ~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l 480 (487)
T TIGR02398 438 MDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAV 480 (487)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 999999999996434433333222 356678777777776544
No 83
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.89 E-value=3.6e-21 Score=195.56 Aligned_cols=216 Identities=16% Similarity=0.131 Sum_probs=158.1
Q ss_pred HHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHH
Q 010448 213 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 292 (510)
Q Consensus 213 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (510)
.+.+|.++++|+..++.+.+ +|++.+ ++.+++++++.+.+.+... +..++++
T Consensus 148 ~~~~d~~~~~s~~~~~~l~~---~g~~~~------ki~v~g~~v~~~f~~~~~~-------------------~~~~r~~ 199 (382)
T PLN02605 148 HKGVTRCFCPSEEVAKRALK---RGLEPS------QIRVYGLPIRPSFARAVRP-------------------KDELRRE 199 (382)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECcccCHhhccCCCC-------------------HHHHHHH
Confidence 45799999999999999987 677765 8999999998765443222 5668899
Q ss_pred hCCCCCCCCcEEEEecCcccccChhhHHHHHHhhh------hCCcE-EEEEecCChhHHHHHHHHHHHCCCceEEeccCC
Q 010448 293 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI------KENVQ-IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 365 (510)
Q Consensus 293 ~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~------~~~~~-l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~ 365 (510)
+|++. ++++|+++|+....|++..+++++..+. .++.+ ++++|++. .+.+.+++... +.++.+.+..+
T Consensus 200 ~gl~~--~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~~--~~~v~~~G~~~ 274 (382)
T PLN02605 200 LGMDE--DLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRDW--KIPVKVRGFVT 274 (382)
T ss_pred cCCCC--CCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhcc--cCCeEEEeccc
Confidence 99973 5689999999999999999999998753 24565 56777663 34455555422 23466666553
Q ss_pred HHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecC------CCccceEEcCCceeEeccccccCCCCCccCHH
Q 010448 366 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST------GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 439 (510)
Q Consensus 366 ~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~------gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~ 439 (510)
++.++|++||++|.++ .|++++|||+||+|+|+++. |+. +.+.+++.|+. ..|++
T Consensus 275 --~~~~l~~aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g~g~~------------~~~~~ 335 (382)
T PLN02605 275 --NMEEWMGACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNGFGAF------------SESPK 335 (382)
T ss_pred --cHHHHHHhCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCCceee------------cCCHH
Confidence 4668999999999855 48899999999999999983 344 33445566764 38999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHh--hccCChHHHHHHHHHH
Q 010448 440 AVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEET 481 (510)
Q Consensus 440 ~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~~~~~~~~ 481 (510)
+++++|.+++++ +++.+++|++++. ....+.+.+++.+.++
T Consensus 336 ~la~~i~~ll~~-~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 336 EIARIVAEWFGD-KSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHHcC-CHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 999999999986 2456666666653 3456666666665543
No 84
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.87 E-value=1.3e-20 Score=188.08 Aligned_cols=241 Identities=17% Similarity=0.173 Sum_probs=175.0
Q ss_pred HHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHH
Q 010448 212 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 291 (510)
Q Consensus 212 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (510)
....+|.+++.|...+..+.... .+ +...++.+.+.++|.+.+.+... +.+...+...|.
T Consensus 206 ~~~~~~~~~~ns~~~~~~f~~~~---~~----L~~~d~~~~y~ei~~s~~~~~~~-------------~~~~~~~~~~r~ 265 (495)
T KOG0853|consen 206 TTGLAWKILVNSYFTKRQFKATF---VS----LSNSDITSTYPEIDGSWFTYGQY-------------ESHLELRLPVRL 265 (495)
T ss_pred hhhccceEecchhhhhhhhhhhh---hh----cCCCCcceeeccccchhcccccc-------------ccchhcccccce
Confidence 45578999999998888877521 11 12335888888898776654211 011111222233
Q ss_pred HhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh-------CCcEEEEEecC-C-------hhHHHHHHHHHHHCC-
Q 010448 292 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTG-K-------KPMEKQLEQLEILYP- 355 (510)
Q Consensus 292 ~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~-------~~~~l~i~G~g-~-------~~~~~~~~~l~~~~~- 355 (510)
+.+.. .....+..+.++.+.|+++.+++++..+.. .+.+++++|+. . -.+.+++.++.++++
T Consensus 266 ~~~v~--~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l 343 (495)
T KOG0853|consen 266 YRGVS--GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL 343 (495)
T ss_pred eeeec--ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc
Confidence 33443 224688899999999999999999999875 25688888842 1 245667777777763
Q ss_pred --CceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCC
Q 010448 356 --EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 433 (510)
Q Consensus 356 --~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~ 433 (510)
..+.+....+......+++.+.+.+.....|+||++.+|||+||+||||++.||..|+|.++.+|+++
T Consensus 344 ~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~---------- 413 (495)
T KOG0853|consen 344 LGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLI---------- 413 (495)
T ss_pred cCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceee----------
Confidence 33444455555555567777777776666699999999999999999999999999999999999998
Q ss_pred CccCHH---HHHHHHHHHHHhhCHHHHHHHHHHH---hhccCChHHHHHHHHHHHHHHHH
Q 010448 434 DPVDVA---AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEV 487 (510)
Q Consensus 434 ~~~d~~---~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~~y~~l~~ 487 (510)
+| +.+ .+++++.++..| ++.+.+++.++ +.+.|||..+.+++.++....+.
T Consensus 414 dp-~~e~~~~~a~~~~kl~~~--p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~~ 470 (495)
T KOG0853|consen 414 DP-GQEAVAELADALLKLRRD--PELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYLQ 470 (495)
T ss_pred CC-chHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcCC
Confidence 67 555 699999999999 66676666665 67889998888888888876553
No 85
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.86 E-value=2.2e-19 Score=182.85 Aligned_cols=223 Identities=13% Similarity=0.093 Sum_probs=158.3
Q ss_pred HHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHH
Q 010448 213 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 292 (510)
Q Consensus 213 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (510)
.+.+|.+++.|+.+++.+.+ .|++.+ ++.++.|+++.. |....+ +...+++
T Consensus 145 ~~~~d~~~v~s~~~~~~l~~---~gi~~~------ki~v~GiPv~~~-f~~~~~-------------------~~~~~~~ 195 (391)
T PRK13608 145 TPYSTRYYVATKETKQDFID---VGIDPS------TVKVTGIPIDNK-FETPID-------------------QKQWLID 195 (391)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECeecChH-hccccc-------------------HHHHHHH
Confidence 45699999999999999986 677755 788887777643 322111 3456778
Q ss_pred hCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHH
Q 010448 293 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 372 (510)
Q Consensus 293 ~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~ 372 (510)
+|++.+ ...++++.|++...||++.+++++.+. .+++++++++.+++.+.+.+++.... ..++.+.+.. +.+..+
T Consensus 196 ~~l~~~-~~~ilv~~G~lg~~k~~~~li~~~~~~-~~~~~~vvv~G~~~~l~~~l~~~~~~-~~~v~~~G~~--~~~~~~ 270 (391)
T PRK13608 196 NNLDPD-KQTILMSAGAFGVSKGFDTMITDILAK-SANAQVVMICGKSKELKRSLTAKFKS-NENVLILGYT--KHMNEW 270 (391)
T ss_pred cCCCCC-CCEEEEECCCcccchhHHHHHHHHHhc-CCCceEEEEcCCCHHHHHHHHHHhcc-CCCeEEEecc--chHHHH
Confidence 888643 234566899999899999999986432 25788876654443344444443322 2356665543 346789
Q ss_pred HHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEec-CCCc----cceEEcCCceeEeccccccCCCCCccCHHHHHHHHHH
Q 010448 373 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 447 (510)
Q Consensus 373 ~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~-~gg~----~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ 447 (510)
|++||++|. ++.|+++.|||++|+|+|+++ .+|. ...+.+.+.|+. ..|.++++++|.+
T Consensus 271 ~~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~------------~~~~~~l~~~i~~ 334 (391)
T PRK13608 271 MASSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI------------ADTPEEAIKIVAS 334 (391)
T ss_pred HHhhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE------------eCCHHHHHHHHHH
Confidence 999999995 457999999999999999996 3331 122334455553 4699999999999
Q ss_pred HHHhhCHHHHHHHHHHHh--hccCChHHHHHHHHHHHHHHHH
Q 010448 448 ALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 487 (510)
Q Consensus 448 ll~~~~~~~~~~~~~~~~--~~~fs~~~~~~~~~~~y~~l~~ 487 (510)
++++ ++.+.+|++++. ...++++.+++.+.+++..+.+
T Consensus 335 ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 335 LTNG--NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred HhcC--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhh
Confidence 9987 677777777763 5679999999999998876554
No 86
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.83 E-value=1.7e-18 Score=175.03 Aligned_cols=252 Identities=18% Similarity=0.138 Sum_probs=167.3
Q ss_pred CCCeEEEec-cchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCC
Q 010448 126 GEDVVFVAN-DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 204 (510)
Q Consensus 126 ~pD~iih~h-~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (510)
+|| +||+| ++...+++.++... .++|++.+.+.....+.+. + .
T Consensus 86 ~pD-iv~~~gd~~~~la~a~aa~~-------~~ipv~h~~~g~~s~~~~~-------------------------~---~ 129 (365)
T TIGR00236 86 KPD-IVLVQGDTTTTLAGALAAFY-------LQIPVGHVEAGLRTGDRYS-------------------------P---M 129 (365)
T ss_pred CCC-EEEEeCCchHHHHHHHHHHH-------hCCCEEEEeCCCCcCCCCC-------------------------C---C
Confidence 599 99999 46666666666554 4899876544221100000 0 0
Q ss_pred cchHHHHHH-HhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCC-CCCCCCCCCccccccCCCcCChhhch
Q 010448 205 KINWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAK 282 (510)
Q Consensus 205 ~~~~~~~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngv-d~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (510)
.....+..+ +.||.++++|+..++.+.+ .|++++ ++.+++|++ |...+....
T Consensus 130 ~~~~~r~~~~~~ad~~~~~s~~~~~~l~~---~G~~~~------~I~vign~~~d~~~~~~~~----------------- 183 (365)
T TIGR00236 130 PEEINRQLTGHIADLHFAPTEQAKDNLLR---ENVKAD------SIFVTGNTVIDALLTNVEI----------------- 183 (365)
T ss_pred ccHHHHHHHHHHHHhccCCCHHHHHHHHH---cCCCcc------cEEEeCChHHHHHHHHHhh-----------------
Confidence 001123333 3589999999999999987 577755 899999996 432111100
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEec-Cc-ccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCCCce
Q 010448 283 PLLKEALQAEVGLPVDRNIPVIGFIG-RL-EEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKA 358 (510)
Q Consensus 283 ~~~~~~~~~~~g~~~~~~~~~i~~~G-rl-~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v 358 (510)
.....++++++. +..++++.+ |. ...||++.+++++.++.+ ++++++++|.++....+.+.+.. ....++
T Consensus 184 -~~~~~~~~~~~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~v 257 (365)
T TIGR00236 184 -AYSSPVLSEFGE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHL-GDSKRV 257 (365)
T ss_pred -ccchhHHHhcCC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHh-CCCCCE
Confidence 002344555652 223555554 44 345899999999999864 57899888765433443333322 223468
Q ss_pred EEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEe-cCCCccceEEcCCceeEeccccccCCCCCccC
Q 010448 359 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 437 (510)
Q Consensus 359 ~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s-~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d 437 (510)
.+.+.........+++.+|+++.+| |..++|||+||+|||++ +.|+.++.+.++ +++++ +.|
T Consensus 258 ~~~~~~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-----------~~d 320 (365)
T TIGR00236 258 HLIEPLEYLDFLNLAANSHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-----------GTD 320 (365)
T ss_pred EEECCCChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-----------CCC
Confidence 8877777766778999999999887 56689999999999996 678888888755 55554 479
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 010448 438 VAAVSTTVRRALATYGTQALAEMMKNG 464 (510)
Q Consensus 438 ~~~la~~i~~ll~~~~~~~~~~~~~~~ 464 (510)
++++++++.+++++ ++.+.+++.+.
T Consensus 321 ~~~i~~ai~~ll~~--~~~~~~~~~~~ 345 (365)
T TIGR00236 321 KENITKAAKRLLTD--PDEYKKMSNAS 345 (365)
T ss_pred HHHHHHHHHHHHhC--hHHHHHhhhcC
Confidence 99999999999987 56666665443
No 87
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.82 E-value=3.5e-18 Score=184.99 Aligned_cols=298 Identities=16% Similarity=0.205 Sum_probs=204.8
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccch-hhcCCChhhhcccccccCCCCCCCCC
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGR 204 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (510)
++|++|.+||+|..++|.+++.+. ++.++-|..| -.||...+ +.+...
T Consensus 230 ~~gD~VWVHDYHL~LlP~~LR~~~------p~~~IGfFlH-----iPFPs~Eifr~LP~r-------------------- 278 (934)
T PLN03064 230 EEGDVVWCHDYHLMFLPKCLKEYN------SNMKVGWFLH-----TPFPSSEIHRTLPSR-------------------- 278 (934)
T ss_pred CCCCEEEEecchhhHHHHHHHHhC------CCCcEEEEec-----CCCCChHHHhhCCcH--------------------
Confidence 466699999999999999999875 6899999999 44554332 222211
Q ss_pred cchHHHHHHHhccceeecCHHHHHHHhcCCC--CCCch--hhhhh---cCCceEecCCCCCCCCCCCCccccccCCCcCC
Q 010448 205 KINWMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNIIR---KTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 277 (510)
Q Consensus 205 ~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~--~~~~~---~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~ 277 (510)
.-+-.++..||.|-+.+..+.+.+.+... .|... ..+.. ..++.++|-|||++.|......
T Consensus 279 --~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~---------- 346 (934)
T PLN03064 279 --SELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALET---------- 346 (934)
T ss_pred --HHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcC----------
Confidence 22345677899999999999888775221 12110 00000 1246788999998887543210
Q ss_pred hhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CC----cEEEEEe-----cCC--hhHH
Q 010448 278 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLG-----TGK--KPME 344 (510)
Q Consensus 278 ~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~----~~l~i~G-----~g~--~~~~ 344 (510)
+.-......++++++ ++.+|+.++|+++.||+...+.|++++.+ |+ +.|+-+. +++ ..++
T Consensus 347 --~~v~~~~~~lr~~~~-----g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~ 419 (934)
T PLN03064 347 --PQVQQHIKELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLT 419 (934)
T ss_pred --hhHHHHHHHHHHHhC-----CceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHH
Confidence 111222446677665 45799999999999999999999998765 33 3444333 222 2344
Q ss_pred HHHHHHHHHCC----C----ceEEe-ccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCC----CcEEecCCCcc
Q 010448 345 KQLEQLEILYP----E----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT----VPIVASTGGLV 411 (510)
Q Consensus 345 ~~~~~l~~~~~----~----~v~~~-~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~----Pvv~s~~gg~~ 411 (510)
.++.+++.+.+ . .|.+. -.++.+++..+|+.||++++||..||++++..|||+|+. ++|.|..+|..
T Consensus 420 ~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa 499 (934)
T PLN03064 420 SQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAA 499 (934)
T ss_pred HHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchH
Confidence 44555544322 1 13322 235778888899999999999999999999999999944 45559988888
Q ss_pred ceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHH--hhccCChHHHHHHHHHHHHHHH
Q 010448 412 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 486 (510)
Q Consensus 412 e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~~~~~~~~y~~l~ 486 (510)
+.+ +..+++| +|.|++++|++|.++++.+ ++.+.+..++. ....+|+...++.+.+-+....
T Consensus 500 ~~L--~~~AllV----------NP~D~~~vA~AI~~AL~M~-~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 500 QSL--GAGAILV----------NPWNITEVAASIAQALNMP-EEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTV 563 (934)
T ss_pred HHh--CCceEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHH
Confidence 877 3457887 9999999999999999953 34444433333 3577999999999887776654
No 88
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.81 E-value=2.6e-18 Score=171.12 Aligned_cols=184 Identities=16% Similarity=0.084 Sum_probs=134.3
Q ss_pred hHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHH
Q 010448 207 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 286 (510)
Q Consensus 207 ~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (510)
.+++..++.||.|+++|+.+++.+.+ .|++.+ ++.+++++.+.....+..
T Consensus 115 ~~~~~~~~~aD~iI~~S~~~~~~l~~---~g~~~~------~i~~~~~~~~~~~~~~~~--------------------- 164 (333)
T PRK09814 115 KEEIDMLNLADVLIVHSKKMKDRLVE---EGLTTD------KIIVQGIFDYLNDIELVK--------------------- 164 (333)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCCcC------ceEecccccccccccccc---------------------
Confidence 55688899999999999999999987 565433 676666655432111100
Q ss_pred HHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCH
Q 010448 287 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 366 (510)
Q Consensus 287 ~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~ 366 (510)
..+..++|+|+|++...+++. . ..++++|+|+|+|+.. + ....+|.+.+.++.
T Consensus 165 ----------~~~~~~~i~yaG~l~k~~~l~----~----~~~~~~l~i~G~g~~~--~-------~~~~~V~f~G~~~~ 217 (333)
T PRK09814 165 ----------TPSFQKKINFAGNLEKSPFLK----N----WSQGIKLTVFGPNPED--L-------ENSANISYKGWFDP 217 (333)
T ss_pred ----------cccCCceEEEecChhhchHHH----h----cCCCCeEEEECCCccc--c-------ccCCCeEEecCCCH
Confidence 012346899999999543221 1 1257999999999732 1 23346999999999
Q ss_pred HHHHHHHHhCcEEEeCCCC-----------CCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCc
Q 010448 367 PLAHMIIAGADFILIPSRF-----------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 435 (510)
Q Consensus 367 ~~~~~~~~~adv~v~ps~~-----------E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~ 435 (510)
+++..+|+. |+++++... -.+|.++.|+||||+|||+++.+++.++|+++.+|+++ +
T Consensus 218 eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v----------~- 285 (333)
T PRK09814 218 EELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLGFVV----------D- 285 (333)
T ss_pred HHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCceEEe----------C-
Confidence 999888888 766654321 35789999999999999999999999999999999997 4
Q ss_pred cCHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 010448 436 VDVAAVSTTVRRALATYGTQALAEMMKNG 464 (510)
Q Consensus 436 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~ 464 (510)
+.++++++|.++. ++.+.+|++++
T Consensus 286 -~~~el~~~l~~~~----~~~~~~m~~n~ 309 (333)
T PRK09814 286 -SLEELPEIIDNIT----EEEYQEMVENV 309 (333)
T ss_pred -CHHHHHHHHHhcC----HHHHHHHHHHH
Confidence 7889999998753 34556666665
No 89
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.81 E-value=3.7e-18 Score=159.76 Aligned_cols=118 Identities=28% Similarity=0.443 Sum_probs=96.6
Q ss_pred EecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccC-CHHHHHHHHHhCcEEEeC
Q 010448 306 FIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIAGADFILIP 382 (510)
Q Consensus 306 ~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~-~~~~~~~~~~~adv~v~p 382 (510)
|+|++.+.||++.+++++..+.+ ++++++++|.+.+...............++.+.+.+ +.+....+++.||++++|
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~ 188 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLP 188 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEec
Confidence 99999999999999999999986 489999999987422211111112233468877776 556666677779999999
Q ss_pred CCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEe
Q 010448 383 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQM 423 (510)
Q Consensus 383 s~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~ 423 (510)
|..|++|++++|||++|+|+|+|+.++..|++.++.+|+++
T Consensus 189 ~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 189 SLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred ccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 99999999999999999999999999999999999999874
No 90
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.78 E-value=2.1e-17 Score=166.98 Aligned_cols=216 Identities=17% Similarity=0.162 Sum_probs=145.0
Q ss_pred HHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCC-CCCCCCCCCccccccCCCcCChhhchHHHHHHHH
Q 010448 212 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 290 (510)
Q Consensus 212 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngv-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (510)
..+.+|.++++|+..++.+.+ .|++++ ++.+++|++ |...+.+... .....+
T Consensus 138 ~~~~ad~~~~~s~~~~~~l~~---~G~~~~------kI~vign~v~d~~~~~~~~~------------------~~~~~~ 190 (363)
T cd03786 138 IDKLSDLHFAPTEEARRNLLQ---EGEPPE------RIFVVGNTMIDALLRLLELA------------------KKELIL 190 (363)
T ss_pred HHHHhhhccCCCHHHHHHHHH---cCCCcc------cEEEECchHHHHHHHHHHhh------------------ccchhh
Confidence 456789999999999999987 677755 899999985 4322211100 011223
Q ss_pred HHhCCCCCCCCcEEEEecCccc---ccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHC---CCceEEeccC
Q 010448 291 AEVGLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY---PEKARGVAKF 364 (510)
Q Consensus 291 ~~~g~~~~~~~~~i~~~Grl~~---~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~---~~~v~~~~~~ 364 (510)
+.++++ ++.+++++.||... .||++.++++++++.+.++.+++.|.+. ..+.+++...++ ..++.+.+..
T Consensus 191 ~~~~~~--~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--~~~~l~~~~~~~~~~~~~v~~~~~~ 266 (363)
T cd03786 191 ELLGLL--PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--TRPRIREAGLEFLGHHPNVLLISPL 266 (363)
T ss_pred hhcccC--CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--hHHHHHHHHHhhccCCCCEEEECCc
Confidence 456665 23467778999875 7999999999999865456666666555 344555554443 2457776655
Q ss_pred CHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecC-CCccceEEcCCceeEeccccccCCCCCccCHHHHHH
Q 010448 365 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 443 (510)
Q Consensus 365 ~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~-gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~ 443 (510)
..+++..+|+.||++|.+|- | ...|||++|+|||+++. +...+.++.| .++. ...|++++++
T Consensus 267 ~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g-~~~~-----------~~~~~~~i~~ 329 (363)
T cd03786 267 GYLYFLLLLKNADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESG-TNVL-----------VGTDPEAILA 329 (363)
T ss_pred CHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee-eEEe-----------cCCCHHHHHH
Confidence 66777789999999999984 4 47899999999999974 4355555543 2332 2247999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHhhccCChHHHHHHHHHH
Q 010448 444 TVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 481 (510)
Q Consensus 444 ~i~~ll~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~ 481 (510)
+|.+++++ +.....+. ...|.-...+++..++
T Consensus 330 ~i~~ll~~--~~~~~~~~----~~~~~~~~a~~~I~~~ 361 (363)
T cd03786 330 AIEKLLSD--EFAYSLMS----INPYGDGNASERIVEI 361 (363)
T ss_pred HHHHHhcC--chhhhcCC----CCCCCCCHHHHHHHHH
Confidence 99999987 44443332 3445444445554443
No 91
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.77 E-value=4.5e-17 Score=165.71 Aligned_cols=220 Identities=17% Similarity=0.127 Sum_probs=142.6
Q ss_pred HHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHH
Q 010448 210 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 289 (510)
Q Consensus 210 ~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (510)
+...+.+|.++++|+...+.+.+ .|. ++.++.|.+.... .+... +...
T Consensus 129 ~~~~~~~d~i~~~~~~~~~~~~~---~g~---------~~~~~G~p~~~~~-~~~~~-------------------~~~~ 176 (380)
T PRK00025 129 FKIAKATDHVLALFPFEAAFYDK---LGV---------PVTFVGHPLADAI-PLLPD-------------------RAAA 176 (380)
T ss_pred HHHHHHHhhheeCCccCHHHHHh---cCC---------CeEEECcCHHHhc-ccccC-------------------hHHH
Confidence 33577899999999998888875 332 3445555443221 11011 4456
Q ss_pred HHHhCCCCCCCCcEE-EEec-Ccccc-cChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHC-CCceEEecc
Q 010448 290 QAEVGLPVDRNIPVI-GFIG-RLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY-PEKARGVAK 363 (510)
Q Consensus 290 ~~~~g~~~~~~~~~i-~~~G-rl~~~-Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~-~~~v~~~~~ 363 (510)
+++++++. +.+++ ++.| |..+. ++++.++++++.+.+ ++++++++|.++ ...+.+++...+. +..+...
T Consensus 177 ~~~l~~~~--~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~v~~~-- 251 (380)
T PRK00025 177 RARLGLDP--DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNP-KRREQIEEALAEYAGLEVTLL-- 251 (380)
T ss_pred HHHcCCCC--CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCh-hhHHHHHHHHhhcCCCCeEEE--
Confidence 77888863 33554 4555 44444 457899999998865 578999987532 2445566655554 3334332
Q ss_pred CCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEe-----------------cCCCccceEEcCC--ceeEec
Q 010448 364 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-----------------STGGLVDTVEEGF--TGFQMG 424 (510)
Q Consensus 364 ~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s-----------------~~gg~~e~v~~~~--~G~l~~ 424 (510)
. .++..+|+.||+++++| |.+.+|||++|+|+|++ +.+++++++.++. .+++.
T Consensus 252 -~-~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~- 323 (380)
T PRK00025 252 -D-GQKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQ- 323 (380)
T ss_pred -c-ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcC-
Confidence 2 34567999999999987 88888999999999987 4556667776653 44544
Q ss_pred cccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHH--hhccCChHHHHHHHHHHHHHHH
Q 010448 425 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 486 (510)
Q Consensus 425 ~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~~~~~~~~y~~l~ 486 (510)
+..|++++++++.++++| ++.+.+++++. ..+.. -...+++..+.+.+++
T Consensus 324 ---------~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~ 375 (380)
T PRK00025 324 ---------EEATPEKLARALLPLLAD--GARRQALLEGFTELHQQL-RCGADERAAQAVLELL 375 (380)
T ss_pred ---------CCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHh
Confidence 677999999999999998 66666666664 22222 2224455555554444
No 92
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.77 E-value=4.8e-17 Score=164.70 Aligned_cols=319 Identities=18% Similarity=0.204 Sum_probs=175.3
Q ss_pred CCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCccccc-C---ccchhhcC-CChhhhcccccccCCCCCC
Q 010448 127 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-A---FEDFGLLN-LPAQFKSSFDFIDGYNKPV 201 (510)
Q Consensus 127 pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~-~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 201 (510)
+.+|.|+|+|.++...+++++.. ..+..|+|.|.... |++ . ...+..+. ....-.. .+.-
T Consensus 143 ~~ViaHfHEWmaG~gll~lr~~~------~~VaTvFTTHAT~l-GR~l~~~~~~~Y~~L~~~~~d~eA--------~~~~ 207 (633)
T PF05693_consen 143 PKVIAHFHEWMAGVGLLYLRKRK------PDVATVFTTHATLL-GRYLAANNKDFYNNLDKFNGDQEA--------GERN 207 (633)
T ss_dssp EEEEEEEESGGGTTHHHHHHHTT-------SCEEEEEESS-HH-HHHHTTTSS-TTTSGTTS-HHHHH--------HHTT
T ss_pred CcEEEEechHhHhHHHHHHhccC------CCeeEEEEecccch-hhHhhcCCCcHHHHhhccCccccc--------cCcc
Confidence 67799999999998888888764 68999999996533 221 0 00000000 0000000 0000
Q ss_pred CCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhc
Q 010448 202 RGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDA 281 (510)
Q Consensus 202 ~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~ 281 (510)
......+++.+...||.+.|||+-.+.+.... .+ +..=.|+|||+|.+.|..... +++.
T Consensus 208 i~~k~~iEraaA~~AdvFTTVSeITa~Ea~~L--L~--------r~pDvV~pNGl~v~~~~~~~e-----------fqnl 266 (633)
T PF05693_consen 208 IYHKHSIERAAAHYADVFTTVSEITAKEAEHL--LK--------RKPDVVTPNGLNVDKFPALHE-----------FQNL 266 (633)
T ss_dssp -HHHHHHHHHHHHHSSEEEESSHHHHHHHHHH--HS--------S--SEE----B-GGGTSSTTH-----------HHHH
T ss_pred chHHHHHHHHHHHhcCeeeehhhhHHHHHHHH--hC--------CCCCEEcCCCccccccccchH-----------HHHH
Confidence 01234566888999999999999888876641 11 223467899999887765432 2223
Q ss_pred hHHHHHHH----HHHh-C-CCCC-CCCcEEEEecCcc-cccChhhHHHHHHhhhh------CC--c-EEEEEecCC----
Q 010448 282 KPLLKEAL----QAEV-G-LPVD-RNIPVIGFIGRLE-EQKGSDILAAAIPHFIK------EN--V-QIIVLGTGK---- 340 (510)
Q Consensus 282 ~~~~~~~~----~~~~-g-~~~~-~~~~~i~~~Grl~-~~Kg~~~li~a~~~l~~------~~--~-~l~i~G~g~---- 340 (510)
+...++.+ +..+ | ..-+ ++.++|..+||.+ ..||+|.+|+|+.+|.. .+ + -|+|+=...
T Consensus 267 ~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ 346 (633)
T PF05693_consen 267 HAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFN 346 (633)
T ss_dssp HHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-
T ss_pred HHHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcC
Confidence 33344433 3332 2 1112 3457888999997 79999999999999853 12 2 233332110
Q ss_pred -h---------hHHHH-----------------------------------HHHHH------------------------
Q 010448 341 -K---------PMEKQ-----------------------------------LEQLE------------------------ 351 (510)
Q Consensus 341 -~---------~~~~~-----------------------------------~~~l~------------------------ 351 (510)
+ .+++. +++..
T Consensus 347 ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpI 426 (633)
T PF05693_consen 347 VESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPI 426 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHH
Confidence 0 00000 00000
Q ss_pred --------H--HCCC--ceEEeccC-------CHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccc
Q 010448 352 --------I--LYPE--KARGVAKF-------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 412 (510)
Q Consensus 352 --------~--~~~~--~v~~~~~~-------~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e 412 (510)
. ...+ +|+|...+ -+-...+++..||+.|+||.+||+|.+.+|+.++|+|.|+|+..|+..
T Consensus 427 Ln~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~ 506 (633)
T PF05693_consen 427 LNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGC 506 (633)
T ss_dssp HHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHH
T ss_pred HHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHH
Confidence 0 0011 22333222 112233689999999999999999999999999999999999988775
Q ss_pred eEEc-----CCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhC---HHHHHHHHHHH--hhccCChHHHHHHHHHHH
Q 010448 413 TVEE-----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG---TQALAEMMKNG--MAQDLSWKGPAKKWEETL 482 (510)
Q Consensus 413 ~v~~-----~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~---~~~~~~~~~~~--~~~~fs~~~~~~~~~~~y 482 (510)
.+.+ ...|+.+- --...+.++.++.|...+.+.. ..++..+..++ ..+..+|+.+...|.+.|
T Consensus 507 ~~~~~~~~~~~~GV~Vv-------dR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay 579 (633)
T PF05693_consen 507 WMQEHIEDPEEYGVYVV-------DRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAY 579 (633)
T ss_dssp HHHTTS-HHGGGTEEEE--------SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHH
T ss_pred HHHHhhccCcCCcEEEE-------eCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 5543 23455440 1133456666666665555431 23333333332 578899999999999999
Q ss_pred HHHHHc
Q 010448 483 LNLEVA 488 (510)
Q Consensus 483 ~~l~~~ 488 (510)
+..+.+
T Consensus 580 ~~AL~~ 585 (633)
T PF05693_consen 580 DLALRR 585 (633)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988764
No 93
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.77 E-value=9.3e-17 Score=159.37 Aligned_cols=223 Identities=28% Similarity=0.441 Sum_probs=169.4
Q ss_pred hccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhC
Q 010448 215 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 294 (510)
Q Consensus 215 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 294 (510)
.++.+++.+....+.+... .. ..++.++||+++...+.+. ..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~---~~-------~~~~~~~~~~~~~~~~~~~---------------------------~~~ 192 (381)
T COG0438 150 LADRVIAVSPALKELLEAL---GV-------PNKIVVIPNGIDTEKFAPA---------------------------RIG 192 (381)
T ss_pred cccEEEECCHHHHHHHHHh---CC-------CCCceEecCCcCHHHcCcc---------------------------ccC
Confidence 3788888888876655542 11 1168899999998876541 011
Q ss_pred CCCCCCCcEEEEecCcccccChhhHHHHHHhhhhC--CcEEEEEecCChhHHHHHHHHHHHCC--CceEEeccCCHHHHH
Q 010448 295 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAH 370 (510)
Q Consensus 295 ~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~--~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v~~~~~~~~~~~~ 370 (510)
+..+.....++++||+.+.||++.+++++..+... ++.++++|.+... ...+..+..+.. ..+.+.+..+.++..
T Consensus 193 ~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 271 (381)
T COG0438 193 LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-REELEKLAKKLGLEDNVKFLGYVPDEELA 271 (381)
T ss_pred CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-HHHHHHHHHHhCCCCcEEEecccCHHHHH
Confidence 11111136999999999999999999999999763 3899999998742 233333444432 357777777756666
Q ss_pred HHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHH
Q 010448 371 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 450 (510)
Q Consensus 371 ~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~ 450 (510)
.+++.+|++++||..|++|++++|||++|+|||+++.++..+++.++.+|+++ .+.+.+++++++..+++
T Consensus 272 ~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~i~~~~~ 341 (381)
T COG0438 272 ELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLV----------PPGDVEELADALEQLLE 341 (381)
T ss_pred HHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEec----------CCCCHHHHHHHHHHHhc
Confidence 69999999999999999999999999999999999999999999988778865 66689999999999999
Q ss_pred hhCHHHHHHHHH---HHhhccCChHHHHHHHHHHHHHHHH
Q 010448 451 TYGTQALAEMMK---NGMAQDLSWKGPAKKWEETLLNLEV 487 (510)
Q Consensus 451 ~~~~~~~~~~~~---~~~~~~fs~~~~~~~~~~~y~~l~~ 487 (510)
+. +.+..++. +...+.|+|+..++++.+++.....
T Consensus 342 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 342 DP--ELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred CH--HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 83 33444433 2234789999999999999987764
No 94
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=2e-15 Score=141.12 Aligned_cols=300 Identities=16% Similarity=0.203 Sum_probs=184.9
Q ss_pred CCCeEEEeccchh--hhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCC
Q 010448 126 GEDVVFVANDWHT--SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 203 (510)
Q Consensus 126 ~pD~iih~h~~~~--~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (510)
.+| +|..++.++ .++.+.+... +.+++++++-||..+.-... ...+.. .++.
T Consensus 103 ~~~-~ilvQNPP~iPtliv~~~~~~------l~~~KfiIDWHNy~Ysl~l~----~~~g~~--------------h~lV- 156 (444)
T KOG2941|consen 103 PPD-IILVQNPPSIPTLIVCVLYSI------LTGAKFIIDWHNYGYSLQLK----LKLGFQ--------------HPLV- 156 (444)
T ss_pred CCc-EEEEeCCCCCchHHHHHHHHH------HhcceEEEEehhhHHHHHHH----hhcCCC--------------CchH-
Confidence 488 777766544 2222222212 26999999999877620000 001111 1111
Q ss_pred CcchHH-HHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCC-----CCC----CCCCCccccccCC
Q 010448 204 RKINWM-KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD-----VQE----WNPLTDKYIGVKY 273 (510)
Q Consensus 204 ~~~~~~-~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd-----~~~----~~~~~~~~~~~~~ 273 (510)
+...++ +..-+.||.-+||++.|++++.+. .|+. +..+++.-.. .+. |.+.....- .|
T Consensus 157 ~l~~~~E~~fgk~a~~nLcVT~AMr~dL~qn--Wgi~--------ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~--~f 224 (444)
T KOG2941|consen 157 RLVRWLEKYFGKLADYNLCVTKAMREDLIQN--WGIN--------RAKVLYDRPPSKPTPLDEQHELFMKLAGDHS--PF 224 (444)
T ss_pred HHHHHHHHHhhcccccchhhHHHHHHHHHHh--cCCc--------eeEEEecCCCCCCCchhHHHHHHhhhccccc--hh
Confidence 222333 445568999999999999998874 4443 3444442111 000 111110000 00
Q ss_pred CcCChhhchHHHHHHHHHHhC---CCC-CCCCcEEEEecCcccccChhhHHHHHHhhhh---------CCcEEEEEecCC
Q 010448 274 DASTVMDAKPLLKEALQAEVG---LPV-DRNIPVIGFIGRLEEQKGSDILAAAIPHFIK---------ENVQIIVLGTGK 340 (510)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~g---~~~-~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~---------~~~~l~i~G~g~ 340 (510)
- ....+.+..+...+-++.. ... .....+++..-.+++...+..|++|+....+ |.+-++|.|+|+
T Consensus 225 ~-ar~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP 303 (444)
T KOG2941|consen 225 R-AREPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP 303 (444)
T ss_pred h-hcccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc
Confidence 0 0112223333333433332 100 1123467777789999999999999984422 578889999999
Q ss_pred hhHHHHHHHHHHHCCC-ceEE-eccCCHHHHHHHHHhCcEEEeCCCC---CCccHHHHHHHHhCCCcEEecCCCccceEE
Q 010448 341 KPMEKQLEQLEILYPE-KARG-VAKFNIPLAHMIIAGADFILIPSRF---EPCGLIQLHAMRYGTVPIVASTGGLVDTVE 415 (510)
Q Consensus 341 ~~~~~~~~~l~~~~~~-~v~~-~~~~~~~~~~~~~~~adv~v~ps~~---E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~ 415 (510)
+++.+.+...+++- +|.+ ..+...|+.+.+++.||++|+-... =-.|+++++.+.||+||+|-+...+.|+|+
T Consensus 304 --lkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVk 381 (444)
T KOG2941|consen 304 --LKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVK 381 (444)
T ss_pred --hhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHh
Confidence 55555555554432 3433 3455788888999999999875433 237999999999999999999999999999
Q ss_pred cCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhC--HHHHHHHHHHHh-hccCChHHHHHHH
Q 010448 416 EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGM-AQDLSWKGPAKKW 478 (510)
Q Consensus 416 ~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~--~~~~~~~~~~~~-~~~fs~~~~~~~~ 478 (510)
|+.||++| +|.+++++.+..+.++.. ...+.+..++.. .+...|+..-++.
T Consensus 382 h~eNGlvF------------~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~e~RW~~~W~~~ 435 (444)
T KOG2941|consen 382 HGENGLVF------------EDSEELAEQLQMLFKNFPDNADELNQLKKNLREEQELRWDESWERT 435 (444)
T ss_pred cCCCceEe------------ccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHHhhhHHHHHHHh
Confidence 99999998 899999999999999642 355556555554 3556777654443
No 95
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.69 E-value=9.1e-15 Score=136.66 Aligned_cols=223 Identities=15% Similarity=0.155 Sum_probs=168.1
Q ss_pred HhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHh
Q 010448 214 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 293 (510)
Q Consensus 214 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (510)
..||.+++.|.+..+.+.+.+ ...+..+|+..++++.+ +...
T Consensus 221 ~~ad~vm~NssWT~nHI~qiW----------~~~~~~iVyPPC~~e~l----------------------------ks~~ 262 (465)
T KOG1387|consen 221 SKADIVMTNSSWTNNHIKQIW----------QSNTCSIVYPPCSTEDL----------------------------KSKF 262 (465)
T ss_pred ccceEEEecchhhHHHHHHHh----------hccceeEEcCCCCHHHH----------------------------HHHh
Confidence 479999999999998887522 22367778777775533 2222
Q ss_pred CCCCCCCCcEEEEecCcccccChh-hHHHHHHhhhh------CCcEEEEEecCC----hhHHHHHHHHHHHCC--CceEE
Q 010448 294 GLPVDRNIPVIGFIGRLEEQKGSD-ILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILYP--EKARG 360 (510)
Q Consensus 294 g~~~~~~~~~i~~~Grl~~~Kg~~-~li~a~~~l~~------~~~~l~i~G~g~----~~~~~~~~~l~~~~~--~~v~~ 360 (510)
+- ++...+.++++|.+.|.|++. +=++|+-..+. ++++|+++|+.. .+..+.++.++.++. .+|.+
T Consensus 263 ~t-e~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F 341 (465)
T KOG1387|consen 263 GT-EGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQF 341 (465)
T ss_pred cc-cCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEE
Confidence 22 223457999999999999999 33444444333 368999999853 234456677776653 47888
Q ss_pred eccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCcc-ceEEc---CCceeEeccccccCCCCCcc
Q 010448 361 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-DTVEE---GFTGFQMGSFSVDCEAVDPV 436 (510)
Q Consensus 361 ~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~-e~v~~---~~~G~l~~~~~~~~~~~~~~ 436 (510)
....+-+++-.++..|.+.+..-..|-||+.++|+||+|.-+|+.+.||.. |+|.+ ..+||+. .
T Consensus 342 ~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla------------~ 409 (465)
T KOG1387|consen 342 EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLA------------P 409 (465)
T ss_pred EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeec------------C
Confidence 888888888889999999999999999999999999999999999988865 77765 2478864 6
Q ss_pred CHHHHHHHHHHHHHhhCHHHHHHHHHHHh--hccCChHHHHHHHHHHHHHHHHc
Q 010448 437 DVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVA 488 (510)
Q Consensus 437 d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~~~~~~~~y~~l~~~ 488 (510)
+.++.++++.+++.. +.+.+..++++++ ..+|+-.+.-+.|...+..++.+
T Consensus 410 t~~EYaE~iLkIv~~-~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 410 TDEEYAEAILKIVKL-NYDERNMMRRNARKSLARFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred ChHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhcc
Confidence 889999999999987 2344555655553 57899999999999988888754
No 96
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.64 E-value=6.5e-16 Score=132.88 Aligned_cols=129 Identities=29% Similarity=0.377 Sum_probs=94.2
Q ss_pred cEEEEecCcccccChhhHHH-HHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcE
Q 010448 302 PVIGFIGRLEEQKGSDILAA-AIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 378 (510)
Q Consensus 302 ~~i~~~Grl~~~Kg~~~li~-a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv 378 (510)
++|+++|++.+.|+++.+++ +++++.+ ++++|+|+|.+++. ++++ .. .+|.+.+.+ ++...+++.||+
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~~----l~~~-~~--~~v~~~g~~--~e~~~~l~~~dv 73 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPDE----LKRL-RR--PNVRFHGFV--EELPEILAAADV 73 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-H----HCCH-HH--CTEEEE-S---HHHHHHHHC-SE
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHHH----HHHh-cC--CCEEEcCCH--HHHHHHHHhCCE
Confidence 68999999999999999999 9999976 68999999998752 4444 22 258888877 456789999999
Q ss_pred EEeCCC-CCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHh
Q 010448 379 ILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 451 (510)
Q Consensus 379 ~v~ps~-~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~ 451 (510)
++.|+. .++++.+++|||++|+|||+++. +..+++...+.|+++ ++|+++++++|.++++|
T Consensus 74 ~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-----------~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 74 GLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-----------ANDPEELAEAIERLLND 135 (135)
T ss_dssp EEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE------------TT-HHHHHHHHHHHHH-
T ss_pred EEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-----------CCCHHHHHHHHHHHhcC
Confidence 999996 58899999999999999999999 566666655677653 68999999999999875
No 97
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.63 E-value=3.9e-14 Score=143.27 Aligned_cols=316 Identities=14% Similarity=0.106 Sum_probs=214.1
Q ss_pred HHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCc
Q 010448 96 QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAF 175 (510)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~ 175 (510)
+..|....+..++.+.+.- +||++|..||+|..++|.+++.+. +..++-|-.| -.||.
T Consensus 103 w~~Y~~VN~~FA~~v~~~~-----------~~~D~VWVHDYhL~llp~~LR~~~------~~~~IgFFlH-----iPFPs 160 (474)
T PRK10117 103 WEGYLRVNALLADKLLPLL-----------KDDDIIWIHDYHLLPFASELRKRG------VNNRIGFFLH-----IPFPT 160 (474)
T ss_pred HHHHHHHHHHHHHHHHHhc-----------CCCCEEEEeccHhhHHHHHHHHhC------CCCcEEEEEe-----CCCCC
Confidence 4444444555555444432 355699999999999999999875 6789999999 34544
Q ss_pred cch-hhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCC--CCCchh--hhh----hc
Q 010448 176 EDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--NII----RK 246 (510)
Q Consensus 176 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~--~~~----~~ 246 (510)
..+ +.+... .-+-.++..+|.|-+.+..+.+.+.+... .|.... ..+ ..
T Consensus 161 ~eifr~LP~r----------------------~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~ 218 (474)
T PRK10117 161 PEIFNALPPH----------------------DELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKA 218 (474)
T ss_pred hHHHhhCCCh----------------------HHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeE
Confidence 321 222211 23445677899999999999887765211 121110 000 11
Q ss_pred CCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhh
Q 010448 247 TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHF 326 (510)
Q Consensus 247 ~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l 326 (510)
.++.+.|-|||++.|...... ........+++.++ ++.+|+-+.|++..||+..=++|++++
T Consensus 219 v~v~~~PigID~~~~~~~a~~-------------~~~~~~~~lr~~~~-----~~~lilgVDRLDytKGi~~rl~Afe~f 280 (474)
T PRK10117 219 FRTEVYPIGIEPDEIAKQAAG-------------PLPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEAL 280 (474)
T ss_pred EEEEEEECeEcHHHHHHHhhc-------------hHHHHHHHHHHHcC-----CCeEEEEecccccccCHHHHHHHHHHH
Confidence 257788889998777432210 11122345666655 457999999999999999999999998
Q ss_pred hh------CCcEEEEEecCC-------hhHHHHHHHHHHH----CCC----ceEEe-ccCCHHHHHHHHHhCcEEEeCCC
Q 010448 327 IK------ENVQIIVLGTGK-------KPMEKQLEQLEIL----YPE----KARGV-AKFNIPLAHMIIAGADFILIPSR 384 (510)
Q Consensus 327 ~~------~~~~l~i~G~g~-------~~~~~~~~~l~~~----~~~----~v~~~-~~~~~~~~~~~~~~adv~v~ps~ 384 (510)
.+ .++.|+-+.... .+++.++++++.+ ++. -|.+. -.++.+++-.+|+.||++++++.
T Consensus 281 L~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTpl 360 (474)
T PRK10117 281 LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL 360 (474)
T ss_pred HHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEeccc
Confidence 86 267788776532 2445555555543 331 13222 24577777789999999999999
Q ss_pred CCCccHHHHHHHHhCC-----CcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHH
Q 010448 385 FEPCGLIQLHAMRYGT-----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 459 (510)
Q Consensus 385 ~E~~g~~~~Eama~G~-----Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~ 459 (510)
.+|+.++..|+.||.. ++|.|...|..+.+. ..+++ +|.|.+++|++|.+.++.+..+...+
T Consensus 361 RDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~---~AllV----------NP~d~~~~A~Ai~~AL~Mp~~Er~~R 427 (474)
T PRK10117 361 RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIV----------NPYDRDEVAAALDRALTMPLAERISR 427 (474)
T ss_pred ccccccccchheeeecCCCCccEEEecccchHHHhC---CCeEE----------CCCCHHHHHHHHHHHHcCCHHHHHHH
Confidence 9999999999999965 378888888887774 25666 99999999999999999863344333
Q ss_pred HHHHH-hhccCChHHHHHHHHHHHHHHH
Q 010448 460 MMKNG-MAQDLSWKGPAKKWEETLLNLE 486 (510)
Q Consensus 460 ~~~~~-~~~~fs~~~~~~~~~~~y~~l~ 486 (510)
+.... ....++....++.+++-+..+.
T Consensus 428 ~~~l~~~v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 428 HAEMLDVIVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred HHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence 33222 3567888888888887777654
No 98
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.59 E-value=9.1e-14 Score=142.50 Aligned_cols=296 Identities=18% Similarity=0.225 Sum_probs=170.5
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccch-hhcCCChhhhcccccccCCCCCCCCC
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGR 204 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (510)
++|++|..||+|..++|.+++.+. ++.++.+..| -.||...+ +.+..
T Consensus 140 ~~~D~VWVhDYhL~llP~~LR~~~------~~~~IgfFlH-----iPFPs~e~fr~lP~--------------------- 187 (474)
T PF00982_consen 140 RPGDLVWVHDYHLMLLPQMLRERG------PDARIGFFLH-----IPFPSSEIFRCLPW--------------------- 187 (474)
T ss_dssp -TT-EEEEESGGGTTHHHHHHHTT--------SEEEEEE------S----HHHHTTSTT---------------------
T ss_pred cCCCEEEEeCCcHHHHHHHHHhhc------CCceEeeEEe-----cCCCCHHHHhhCCc---------------------
Confidence 356699999999999999999875 6899999999 44554322 22221
Q ss_pred cchHHHHHHHhccceeecCHHHHHHHhcCCC--CCCchhh---hh----hcCCceEecCCCCCCCCCCCCccccccCCCc
Q 010448 205 KINWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN---II----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 275 (510)
Q Consensus 205 ~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~---~~----~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~ 275 (510)
...+-.++..||.|-+.+..+.+.+.+... .|..... .+ +..++.+.|-|||++.+......
T Consensus 188 -r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~-------- 258 (474)
T PF00982_consen 188 -REEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARS-------- 258 (474)
T ss_dssp -HHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH---------
T ss_pred -HHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccC--------
Confidence 123455677899999999999888765311 2221110 00 01246777888887665321100
Q ss_pred CChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh------CCcEEEEEecCC----h---h
Q 010448 276 STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----K---P 342 (510)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~------~~~~l~i~G~g~----~---~ 342 (510)
+.-......++++++- +..+|+-+.|++..||+..=+.|++++.+ .++.|+-++... + +
T Consensus 259 ----~~v~~~~~~l~~~~~~----~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~ 330 (474)
T PF00982_consen 259 ----PEVQERAEELREKFKG----KRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQE 330 (474)
T ss_dssp ----S---HHHHHHHHHTTT-----SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHH
T ss_pred ----hHHHHHHHHHHHhcCC----CcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHH
Confidence 0111224556776651 24799999999999999999999999876 368888777522 2 3
Q ss_pred HHHHHHHHHH----HCCC----ceEEec-cCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCC----cEEecCCC
Q 010448 343 MEKQLEQLEI----LYPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGG 409 (510)
Q Consensus 343 ~~~~~~~l~~----~~~~----~v~~~~-~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~P----vv~s~~gg 409 (510)
+.+++.+++. +++. .|.+.. ..+.++.-.+|+.||+++++|..+|+.++..|+.+|... +|.|...|
T Consensus 331 ~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaG 410 (474)
T PF00982_consen 331 LRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAG 410 (474)
T ss_dssp HHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBG
T ss_pred HHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCC
Confidence 4444444443 3432 244333 467788888999999999999999999999999999765 77888888
Q ss_pred ccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHH-hhccCChHHHHHHHHHHH
Q 010448 410 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETL 482 (510)
Q Consensus 410 ~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fs~~~~~~~~~~~y 482 (510)
..+.+.++ .+++ +|.|++++|++|.++++.+..+....+.+.. ....++....++.+++-+
T Consensus 411 aa~~L~~~--al~V----------NP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 411 AAEQLSEA--ALLV----------NPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDL 472 (474)
T ss_dssp GGGT-TTS---EEE-----------TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred HHHHcCCc--cEEE----------CCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHh
Confidence 88877543 2666 9999999999999999985333333322221 346677777777666544
No 99
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.58 E-value=1.1e-13 Score=144.15 Aligned_cols=162 Identities=13% Similarity=0.079 Sum_probs=132.6
Q ss_pred cEEEEec--CcccccChhhHHHHHHhhhh--CCcEEEEEecCCh-hHHHHHHHHHHHC--C-------------------
Q 010448 302 PVIGFIG--RLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-PMEKQLEQLEILY--P------------------- 355 (510)
Q Consensus 302 ~~i~~~G--rl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~-~~~~~~~~l~~~~--~------------------- 355 (510)
..+++++ |+ +.|.++.+|+++.++.. |+++|.+.|.+.+ .+.+.++++..+. .
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPI 398 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhc
Confidence 4677888 99 99999999999999955 8999999998762 3334443332221 1
Q ss_pred ----------CceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEecc
Q 010448 356 ----------EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 425 (510)
Q Consensus 356 ----------~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~ 425 (510)
..|.+.+..++.++...|..+.++|.+|..|+++ +++||++.|+|+| .-|..++|.++.||+++
T Consensus 399 ~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~li-- 472 (519)
T TIGR03713 399 LQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYII-- 472 (519)
T ss_pred ccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEEe--
Confidence 3455555455556778999999999999999999 9999999999999 55678999999999997
Q ss_pred ccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHHh--hccCChHHHHHHHHHHH
Q 010448 426 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETL 482 (510)
Q Consensus 426 ~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~~~~~~~~y 482 (510)
+|.++|+++|..+|.+ ++.+.++...+. .++||-+++.++|.+++
T Consensus 473 ----------~d~~~l~~al~~~L~~--~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 473 ----------DDISELLKALDYYLDN--LKNWNYSLAYSIKLIDDYSSENIIERLNELI 519 (519)
T ss_pred ----------CCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhhHHHHHHHHHhhC
Confidence 8999999999999998 778888777774 58899999999998753
No 100
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.54 E-value=2.5e-12 Score=130.45 Aligned_cols=193 Identities=16% Similarity=0.097 Sum_probs=120.9
Q ss_pred HHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHH
Q 010448 209 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 288 (510)
Q Consensus 209 ~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (510)
.+...+.+|.|++.++...+.+.+ .|. +..++.|++-......... +..
T Consensus 132 ~r~l~~~~d~v~~~~~~e~~~~~~---~g~---------~~~~vGnPv~~~~~~~~~~-------------------~~~ 180 (385)
T TIGR00215 132 AKKIEKATDFLLAILPFEKAFYQK---KNV---------PCRFVGHPLLDAIPLYKPD-------------------RKS 180 (385)
T ss_pred HHHHHHHHhHhhccCCCcHHHHHh---cCC---------CEEEECCchhhhccccCCC-------------------HHH
Confidence 355677899999999998888774 232 4566777763221110011 445
Q ss_pred HHHHhCCCCCCCCcEEEEe-c-Cccc-ccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHC--CCceEEe
Q 010448 289 LQAEVGLPVDRNIPVIGFI-G-RLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGV 361 (510)
Q Consensus 289 ~~~~~g~~~~~~~~~i~~~-G-rl~~-~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~--~~~v~~~ 361 (510)
.++++|++. +.++|+++ | |..+ .|++..+++++..+.+ +++++++.+.+.. ..+.+++....+ +..+...
T Consensus 181 ~r~~lgl~~--~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-~~~~~~~~~~~~~~~~~v~~~ 257 (385)
T TIGR00215 181 AREKLGIDH--NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-RRLQFEQIKAEYGPDLQLHLI 257 (385)
T ss_pred HHHHcCCCC--CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-hHHHHHHHHHHhCCCCcEEEE
Confidence 677888863 44666554 3 7766 7899999999999875 5788876653321 233344444333 2234433
Q ss_pred ccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEec-CCCcc----------------ceEEcCCceeEec
Q 010448 362 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLV----------------DTVEEGFTGFQMG 424 (510)
Q Consensus 362 ~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~-~gg~~----------------e~v~~~~~G~l~~ 424 (510)
.. +...+|++||++|++| |.+.+|+|++|+|+|... ...++ .++.+....-
T Consensus 258 ~~----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~p--- 325 (385)
T TIGR00215 258 DG----DARKAMFAADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVP--- 325 (385)
T ss_pred Cc----hHHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccch---
Confidence 22 2346999999999999 778889999999999873 22221 1122111111
Q ss_pred cccccCCCCCccCHHHHHHHHHHHHHhh
Q 010448 425 SFSVDCEAVDPVDVAAVSTTVRRALATY 452 (510)
Q Consensus 425 ~~~~~~~~~~~~d~~~la~~i~~ll~~~ 452 (510)
.+.. ..-+++.+++.+.++++|+
T Consensus 326 el~q-----~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 326 ELLQ-----EECTPHPLAIALLLLLENG 348 (385)
T ss_pred hhcC-----CCCCHHHHHHHHHHHhcCC
Confidence 0111 3347899999999999883
No 101
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.53 E-value=4.8e-12 Score=127.55 Aligned_cols=316 Identities=16% Similarity=0.188 Sum_probs=208.8
Q ss_pred hHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccC
Q 010448 95 NQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFA 174 (510)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~ 174 (510)
.+..|....++.++.+...- +++++|..||+|..++|.+++.+. ...++.|..| -.||
T Consensus 126 ~w~~Y~~vN~~FAd~i~~~~-----------~~gDiIWVhDYhL~L~P~mlR~~~------~~~~IgfFlH-----iPfP 183 (486)
T COG0380 126 WWDAYVKVNRKFADKIVEIY-----------EPGDIIWVHDYHLLLVPQMLRERI------PDAKIGFFLH-----IPFP 183 (486)
T ss_pred HHHHHHHHHHHHHHHHHHhc-----------CCCCEEEEEechhhhhHHHHHHhC------CCceEEEEEe-----CCCC
Confidence 35555556666666555442 344599999999999999999875 6789999999 4455
Q ss_pred ccch-hhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCC--C------Cchhhh-h
Q 010448 175 FEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK--G------VELDNI-I 244 (510)
Q Consensus 175 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~--g------~~~~~~-~ 244 (510)
...+ +.+... .-+-.++..||.|-+.++.+++.+.+.... | +..... =
T Consensus 184 ssEvfr~lP~r----------------------~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~ 241 (486)
T COG0380 184 SSEVFRCLPWR----------------------EEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADG 241 (486)
T ss_pred CHHHHhhCchH----------------------HHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCC
Confidence 4332 222211 123446678999999999998876643211 1 100000 0
Q ss_pred hcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHH
Q 010448 245 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIP 324 (510)
Q Consensus 245 ~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~ 324 (510)
...++..+|-|+|+..|...... +.-.....++++.++- ++.+|+.+.|++..||+..=+.|++
T Consensus 242 ~~v~v~a~PIgID~~~~~~~~~~------------~~v~~~~~el~~~~~~----~~kiivgvDRlDy~kGi~~rl~Afe 305 (486)
T COG0380 242 RIVKVGAFPIGIDPEEFERALKS------------PSVQEKVLELKAELGR----NKKLIVGVDRLDYSKGIPQRLLAFE 305 (486)
T ss_pred ceEEEEEEeeecCHHHHHHhhcC------------CchhhHHHHHHHHhcC----CceEEEEehhcccccCcHHHHHHHH
Confidence 01257778999998877543210 0001123455566552 3679999999999999999999999
Q ss_pred hhhh------CCcEEEEEecCC----hh---HHHHHHHHHH----HCCC----ceEEec-cCCHHHHHHHHHhCcEEEeC
Q 010448 325 HFIK------ENVQIIVLGTGK----KP---MEKQLEQLEI----LYPE----KARGVA-KFNIPLAHMIIAGADFILIP 382 (510)
Q Consensus 325 ~l~~------~~~~l~i~G~g~----~~---~~~~~~~l~~----~~~~----~v~~~~-~~~~~~~~~~~~~adv~v~p 382 (510)
++.+ .++.++-++... +. +..++++++. +++. .|.++. ..+.++.-.++..||+++++
T Consensus 306 ~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVt 385 (486)
T COG0380 306 RLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVT 385 (486)
T ss_pred HHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeec
Confidence 9986 367888887643 22 3344444443 3432 233322 35777777899999999999
Q ss_pred CCCCCccHHHHHHHHhC----CCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHH
Q 010448 383 SRFEPCGLIQLHAMRYG----TVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 458 (510)
Q Consensus 383 s~~E~~g~~~~Eama~G----~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~ 458 (510)
+..+|+.++..|+.+|. -+.|-|...|....+.+ .+++ +|.|.++++++|.+.|+.+..+...
T Consensus 386 plrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliV----------NP~d~~~va~ai~~AL~m~~eEr~~ 452 (486)
T COG0380 386 PLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIV----------NPWDTKEVADAIKRALTMSLEERKE 452 (486)
T ss_pred cccccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeE----------CCCChHHHHHHHHHHhcCCHHHHHH
Confidence 99999999999999883 47888888887777765 4665 9999999999999999985323222
Q ss_pred HHHHHH-hhccCChHHHHHHHHHHHH
Q 010448 459 EMMKNG-MAQDLSWKGPAKKWEETLL 483 (510)
Q Consensus 459 ~~~~~~-~~~~fs~~~~~~~~~~~y~ 483 (510)
.+.... ....++....+..+++-+.
T Consensus 453 r~~~~~~~v~~~d~~~W~~~fl~~la 478 (486)
T COG0380 453 RHEKLLKQVLTHDVARWANSFLDDLA 478 (486)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 222111 2455677777666655444
No 102
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.52 E-value=2e-12 Score=141.28 Aligned_cols=297 Identities=14% Similarity=0.166 Sum_probs=200.7
Q ss_pred eEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccch-hhcCCChhhhcccccccCCCCCCCCCcch
Q 010448 129 VVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKIN 207 (510)
Q Consensus 129 ~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (510)
++|..||+|..++|.+++.+. ++.++-|..| -.||...+ +.+... .
T Consensus 203 d~VWVhDYhL~llP~~LR~~~------~~~~IgfFlH-----iPFPs~eifr~LP~r----------------------~ 249 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRF------NRVKLGFFLH-----SPFPSSEIYKTLPIR----------------------E 249 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhC------CCCcEEEEec-----CCCCChHHHhhCCcH----------------------H
Confidence 499999999999999998875 6899999999 44554332 222211 2
Q ss_pred HHHHHHHhccceeecCHHHHHHHhcCCC--CCCchhh-----hh----hcCCceEecCCCCCCCCCCCCccccccCCCcC
Q 010448 208 WMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-----II----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS 276 (510)
Q Consensus 208 ~~~~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~-----~~----~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~ 276 (510)
-+-.++..||.|-+.+..+++.+.+... .|.+.+. .+ +..++.+.|-|||++.|......
T Consensus 250 eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~--------- 320 (854)
T PLN02205 250 ELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL--------- 320 (854)
T ss_pred HHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC---------
Confidence 2445677899999999999988776321 1222110 00 12256778888888766432110
Q ss_pred ChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--C----CcEEEEEecCC-------hhH
Q 010448 277 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK-------KPM 343 (510)
Q Consensus 277 ~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~----~~~l~i~G~g~-------~~~ 343 (510)
+.......+++++++- .++.+|+-+.|++..||+..=+.|++++.+ | ++.|+-+.... .++
T Consensus 321 ---~~~~~~~~~l~~~~~~---~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~ 394 (854)
T PLN02205 321 ---PETEAKVKELIKQFCD---QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEV 394 (854)
T ss_pred ---hhHHHHHHHHHHHhcc---CCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHH
Confidence 1112224456666652 256799999999999999999999999976 2 56777776422 234
Q ss_pred HHHHHHHHH----HCCC----ceEEe-ccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCC--------------
Q 010448 344 EKQLEQLEI----LYPE----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-------------- 400 (510)
Q Consensus 344 ~~~~~~l~~----~~~~----~v~~~-~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~-------------- 400 (510)
+.++.+++. +++. .|.+. ..++.++.-++|+.||++++++..+|+.++..|+.+|..
T Consensus 395 ~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~ 474 (854)
T PLN02205 395 QAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPS 474 (854)
T ss_pred HHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccc
Confidence 444444444 4432 23433 345777777899999999999999999999999999854
Q ss_pred -----CcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHH-hhccCChHHH
Q 010448 401 -----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGP 474 (510)
Q Consensus 401 -----Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fs~~~~ 474 (510)
.+|.|...|....+. ..++| +|.|++++|++|.+.++.+..+...++.+.. ....++....
T Consensus 475 ~~~~gvLiLSEfaGaa~~L~---~Ai~V----------NP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W 541 (854)
T PLN02205 475 TPKKSMLVVSEFIGCSPSLS---GAIRV----------NPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYW 541 (854)
T ss_pred cCCCCceEeeeccchhHHhC---cCeEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHH
Confidence 256666666655553 24555 9999999999999999986444433333222 3466788887
Q ss_pred HHHHHHHHHHHH
Q 010448 475 AKKWEETLLNLE 486 (510)
Q Consensus 475 ~~~~~~~y~~l~ 486 (510)
++.+.+-++...
T Consensus 542 ~~~fl~~l~~~~ 553 (854)
T PLN02205 542 ARSFLQDLERTC 553 (854)
T ss_pred HHHHHHHHHHHH
Confidence 887777666653
No 103
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.43 E-value=5.2e-13 Score=117.66 Aligned_cols=157 Identities=19% Similarity=0.157 Sum_probs=84.9
Q ss_pred chhhhhHHHHHHHCCCcEEEEeeCCCCcccccCCcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCCCc
Q 010448 3 NASSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSK 82 (510)
Q Consensus 3 ~~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~~~ 82 (510)
+..+.+|+++|+++||+|+|+++.......+ ...+|+++..++.+.....
T Consensus 4 ~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~-------- 53 (160)
T PF13579_consen 4 ERYVRELARALAARGHEVTVVTPQPDPEDDE----------------------EEEDGVRVHRLPLPRRPWP-------- 53 (160)
T ss_dssp HHHHHHHHHHHHHTT-EEEEEEE---GGG-S----------------------EEETTEEEEEE--S-SSSG--------
T ss_pred HHHHHHHHHHHHHCCCEEEEEecCCCCcccc----------------------cccCCceEEeccCCccchh--------
Confidence 4678899999999999999999885533211 2246888888865433210
Q ss_pred ccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEE
Q 010448 83 IYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 162 (510)
Q Consensus 83 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~ 162 (510)
... . + +...+..++.... .+|| |||+|.+...+++.++++. .++|+|+
T Consensus 54 ~~~-------~----~---~~~~~~~~l~~~~----------~~~D-vv~~~~~~~~~~~~~~~~~-------~~~p~v~ 101 (160)
T PF13579_consen 54 LRL-------L----R---FLRRLRRLLAARR----------ERPD-VVHAHSPTAGLVAALARRR-------RGIPLVV 101 (160)
T ss_dssp GGH-------C----C---HHHHHHHHCHHCT-------------S-EEEEEHHHHHHHHHHHHHH-------HT--EEE
T ss_pred hhh-------H----H---HHHHHHHHHhhhc----------cCCe-EEEecccchhHHHHHHHHc-------cCCcEEE
Confidence 000 0 0 1122233331111 2599 9999997767676666633 3899999
Q ss_pred EecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhh
Q 010448 163 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN 242 (510)
Q Consensus 163 tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~ 242 (510)
++|+....... +.... ....+++..++.||.++++|+..++.+.+ +|++++
T Consensus 102 ~~h~~~~~~~~--------~~~~~-----------------~~~~~~~~~~~~ad~vi~~S~~~~~~l~~---~g~~~~- 152 (160)
T PF13579_consen 102 TVHGTLFRRGS--------RWKRR-----------------LYRWLERRLLRRADRVIVVSEAMRRYLRR---YGVPPD- 152 (160)
T ss_dssp E-SS-T--------------HHHH-----------------HHHHHHHHHHHH-SEEEESSHHHHHHHHH---H---GG-
T ss_pred EECCCchhhcc--------chhhH-----------------HHHHHHHHHHhcCCEEEECCHHHHHHHHH---hCCCCC-
Confidence 99964321100 00000 11234578899999999999999999997 677665
Q ss_pred hhhcCCceEecCC
Q 010448 243 IIRKTGIKGIVNG 255 (510)
Q Consensus 243 ~~~~~ki~vIpng 255 (510)
++.+||||
T Consensus 153 -----ri~vipnG 160 (160)
T PF13579_consen 153 -----RIHVIPNG 160 (160)
T ss_dssp -----GEEE----
T ss_pred -----cEEEeCcC
Confidence 89999998
No 104
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.28 E-value=2.2e-11 Score=109.18 Aligned_cols=162 Identities=15% Similarity=0.143 Sum_probs=84.5
Q ss_pred chhhhhHHHHHHHCCCcEEEEeeCCCCcccccCCcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCCCc
Q 010448 3 NASSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSK 82 (510)
Q Consensus 3 ~~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~~~ 82 (510)
+..+.+|+++|+++||+|+|+++........ . ...........
T Consensus 15 e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~--------------------------~-~~~~~~~~~~~---------- 57 (177)
T PF13439_consen 15 ERVVLNLARALAKRGHEVTVVSPGVKDPIEE--------------------------E-LVKIFVKIPYP---------- 57 (177)
T ss_dssp HHHHHHHHHHHHHTT-EEEEEESS-TTS-SS--------------------------T-EEEE---TT-S----------
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcCCCccchh--------------------------h-ccceeeeeecc----------
Confidence 4567899999999999999999875432211 0 00000000000
Q ss_pred ccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEE
Q 010448 83 IYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 162 (510)
Q Consensus 83 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~ 162 (510)
. .............+.+.+++. +|| |||+|.+........... ++|+|+
T Consensus 58 -~--------~~~~~~~~~~~~~~~~~i~~~------------~~D-iVh~~~~~~~~~~~~~~~---------~~~~v~ 106 (177)
T PF13439_consen 58 -I--------RKRFLRSFFFMRRLRRLIKKE------------KPD-IVHIHGPPAFWIALLACR---------KVPIVY 106 (177)
T ss_dssp -S--------TSS--HHHHHHHHHHHHHHHH------------T-S-EEECCTTHCCCHHHHHHH---------CSCEEE
T ss_pred -c--------ccccchhHHHHHHHHHHHHHc------------CCC-eEEecccchhHHHHHhcc---------CCCEEE
Confidence 0 001122223344555555554 399 999998776655444332 589999
Q ss_pred EecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhh
Q 010448 163 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN 242 (510)
Q Consensus 163 tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~ 242 (510)
++|+..... ........... ......++..++.+|.++|+|+..++.+.+ +|++.+
T Consensus 107 ~~H~~~~~~-------~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~---~~~~~~- 162 (177)
T PF13439_consen 107 TIHGPYFER-------RFLKSKLSPYS-------------YLNFRIERKLYKKADRIIAVSESTKDELIK---FGIPPE- 162 (177)
T ss_dssp EE-HHH--H-------HTTTTSCCCHH-------------HHHHCTTHHHHCCSSEEEESSHHHHHHHHH---HT--SS-
T ss_pred EeCCCcccc-------cccccccchhh-------------hhhhhhhhhHHhcCCEEEEECHHHHHHHHH---hCCccc-
Confidence 999644210 00000000000 001122355578899999999999999997 566544
Q ss_pred hhhcCCceEecCCCCCCCC
Q 010448 243 IIRKTGIKGIVNGMDVQEW 261 (510)
Q Consensus 243 ~~~~~ki~vIpngvd~~~~ 261 (510)
++.+||||||.+.|
T Consensus 163 -----ki~vI~ngid~~~F 176 (177)
T PF13439_consen 163 -----KIHVIYNGIDTDRF 176 (177)
T ss_dssp ------EEE----B-CCCH
T ss_pred -----CCEEEECCccHHHc
Confidence 89999999999877
No 105
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.26 E-value=7.3e-09 Score=103.72 Aligned_cols=249 Identities=14% Similarity=0.105 Sum_probs=136.9
Q ss_pred CCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCC
Q 010448 125 YGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 204 (510)
Q Consensus 125 ~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (510)
++|| +||++.....+.+.+..+. .++|+++...+... +
T Consensus 90 ~kPd-vvi~~Ggy~s~p~~~aa~~-------~~~p~~i~e~n~~~-g--------------------------------- 127 (352)
T PRK12446 90 LKPD-VIFSKGGFVSVPVVIGGWL-------NRVPVLLHESDMTP-G--------------------------------- 127 (352)
T ss_pred cCCC-EEEecCchhhHHHHHHHHH-------cCCCEEEECCCCCc-c---------------------------------
Confidence 4699 9999754544444444443 58999886664211 1
Q ss_pred cchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHH
Q 010448 205 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 284 (510)
Q Consensus 205 ~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (510)
..-+...+.+|.|.+.-+...+.+. +.++.++-|.|..+.....
T Consensus 128 --~~nr~~~~~a~~v~~~f~~~~~~~~--------------~~k~~~tG~Pvr~~~~~~~-------------------- 171 (352)
T PRK12446 128 --LANKIALRFASKIFVTFEEAAKHLP--------------KEKVIYTGSPVREEVLKGN-------------------- 171 (352)
T ss_pred --HHHHHHHHhhCEEEEEccchhhhCC--------------CCCeEEECCcCCccccccc--------------------
Confidence 1124456778888765433322221 1266666666654432211
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEecCcccccChhh-HHHHHHhhhhCCcEEEE-EecCChhHHHHHHHHHHHCCCceEEec
Q 010448 285 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVA 362 (510)
Q Consensus 285 ~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~-li~a~~~l~~~~~~l~i-~G~g~~~~~~~~~~l~~~~~~~v~~~~ 362 (510)
+...++.+++.. ++++|+.+|.=.-.+.+.. +.+++..+.+ ++++++ +|... +++..... . .+.. .
T Consensus 172 -~~~~~~~~~l~~--~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~--~~~~~~~~----~-~~~~-~ 239 (352)
T PRK12446 172 -REKGLAFLGFSR--KKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGN--LDDSLQNK----E-GYRQ-F 239 (352)
T ss_pred -chHHHHhcCCCC--CCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCch--HHHHHhhc----C-CcEE-e
Confidence 234455677653 4567776666333444533 3344554432 466544 45432 33333221 1 1222 2
Q ss_pred cCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC---------ccceEEcCCceeEeccccccCCCC
Q 010448 363 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG---------LVDTVEEGFTGFQMGSFSVDCEAV 433 (510)
Q Consensus 363 ~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg---------~~e~v~~~~~G~l~~~~~~~~~~~ 433 (510)
.|..+++..+|+.||++|.- +-++++.|++++|+|.|...... ..+.+.+.+.+..+. -
T Consensus 240 ~f~~~~m~~~~~~adlvIsr----~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~--------~ 307 (352)
T PRK12446 240 EYVHGELPDILAITDFVISR----AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLY--------E 307 (352)
T ss_pred cchhhhHHHHHHhCCEEEEC----CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcc--------h
Confidence 34335566899999999943 46889999999999999885421 112333445555541 0
Q ss_pred CccCHHHHHHHHHHHHHhhCHHHHHHHHHHHhhccCChHHHHHHHHHHH
Q 010448 434 DPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETL 482 (510)
Q Consensus 434 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 482 (510)
..-+++.+.+++.++++| ++.+.+.. .++.....+++..+++
T Consensus 308 ~~~~~~~l~~~l~~ll~~--~~~~~~~~-----~~~~~~~aa~~i~~~i 349 (352)
T PRK12446 308 EDVTVNSLIKHVEELSHN--NEKYKTAL-----KKYNGKEAIQTIIDHI 349 (352)
T ss_pred hcCCHHHHHHHHHHHHcC--HHHHHHHH-----HHcCCCCHHHHHHHHH
Confidence 233689999999999887 44443322 2244444455544443
No 106
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.23 E-value=2.4e-10 Score=116.36 Aligned_cols=172 Identities=8% Similarity=-0.001 Sum_probs=129.9
Q ss_pred HhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHh
Q 010448 214 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 293 (510)
Q Consensus 214 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (510)
...|.||+.++...+.+.+..+. ..++.++|-|+=.. ....
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~---------~~~~~~ip~g~i~~---~~~~--------------------------- 278 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDN---------EYQEQISQLGYLYP---FKKD--------------------------- 278 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCc---------ccCceEEEEEEEEe---eccc---------------------------
Confidence 57899999998877777753221 12677777775422 1110
Q ss_pred CCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHH
Q 010448 294 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 371 (510)
Q Consensus 294 g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~ 371 (510)
+..+.-+++++. +..|+++++|.+ |+++|.| |.+.+ +...+.++ .+++ +++.+.++....+.+
T Consensus 279 ----~r~~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te-~s~kL~~L-~~y~-nvvly~~~~~~~l~~ 343 (438)
T TIGR02919 279 ----NKYRKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE-MSSKLMSL-DKYD-NVKLYPNITTQKIQE 343 (438)
T ss_pred ----cCCcccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc-ccHHHHHH-HhcC-CcEEECCcChHHHHH
Confidence 012234555552 899999999976 8999999 76653 35677777 6664 577777887767778
Q ss_pred HHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCC-CccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHH
Q 010448 372 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 450 (510)
Q Consensus 372 ~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~g-g~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~ 450 (510)
++..||+++..|..|++++++.||+..|+|+++.+.. |..+++.+ |.++ +.+++++|+++|.++++
T Consensus 344 ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~----------~~~~~~~m~~~i~~lL~ 410 (438)
T TIGR02919 344 LYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIF----------EHNEVDQLISKLKDLLN 410 (438)
T ss_pred HHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Ccee----------cCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999854 55566665 7777 89999999999999999
Q ss_pred hh
Q 010448 451 TY 452 (510)
Q Consensus 451 ~~ 452 (510)
++
T Consensus 411 d~ 412 (438)
T TIGR02919 411 DP 412 (438)
T ss_pred CH
Confidence 83
No 107
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=99.23 E-value=4e-10 Score=118.26 Aligned_cols=366 Identities=19% Similarity=0.203 Sum_probs=217.0
Q ss_pred EEEeCC-eEEEEEEEEEeeCCceEEEEeCccccccccCCC-CCcccCCCCCCCCCChHHHH---HHHHHHHHHhhhhcC-
Q 010448 41 ELKVGD-KIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT-QSKIYGPRTGEDYQDNQLRF---SLLCQAALEAPRILN- 114 (510)
Q Consensus 41 ~~~~~~-~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~- 114 (510)
.|...+ +....+.+......+++++.+...-....+.+. -..+|+..+ .-.|+ .++..+.++.+....
T Consensus 184 ~V~g~~~~~~~lrlW~a~~~~~~~~l~~~n~~e~~~~~~~iT~~LYp~Ds------~elRl~Qeyfl~~agvq~I~~~~~ 257 (750)
T COG0058 184 PVPGYDNRVVTLRLWQAQVGRVPLYLLDFNVGENKNDARNITRVLYPGDS------KELRLKQEYFLGSAGVQDILARGH 257 (750)
T ss_pred eEEeccCcEEEEEEEEEecCccceEeecCCCcccchhhhhHHhhcCCCCc------HHHHHhhhheeeeHHHHHHHHHhh
Confidence 334444 556667777777777888775422110111111 234565322 23333 344444455444331
Q ss_pred cCCCCCCCCCCCCCeEEEeccchhhhHHHHHHH-hhcCCCC-------CCCCcEEEEecCCCccc--ccCccchhhc-C-
Q 010448 115 LNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLL-N- 182 (510)
Q Consensus 115 ~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~-~~~~~~~-------~~~~~~V~tiH~~~~~~--~~~~~~~~~~-~- 182 (510)
.. ...+++- +.|.|+.|++++..-+-+ +.-..+. ....-++||.|+.-+.+ .||...+..+ +
T Consensus 258 ~~-----~~~~~~~-~~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~lpr 331 (750)
T COG0058 258 LE-----HHDLDVL-ADHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLLPR 331 (750)
T ss_pred hc-----cccccch-hhhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHhhh
Confidence 00 0012244 779999998776654433 2221111 13457899999886655 4666554321 1
Q ss_pred -------CChhhhccccc--ccCCCCCCCC-CcchHHHHHHHhccceeecCHHHHHHHhcCC---CCCCchhhhhhcCCc
Q 010448 183 -------LPAQFKSSFDF--IDGYNKPVRG-RKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGI 249 (510)
Q Consensus 183 -------~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~ki 249 (510)
+...+...... .......... ..+++-..++..|..|..||.-+.+.+++.. .+++.+ .++
T Consensus 332 ~~~ii~~in~~~l~~~~~~~~~~~~~~~~~i~~v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~p------~~i 405 (750)
T COG0058 332 HLQIIYEINARFLPEVRLLYLGDLIRRGSPIEEVNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLYP------EKI 405 (750)
T ss_pred hhhhHHHHHhhhhHHHHhhccccccccCCcccceehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccCc------ccc
Confidence 11111111000 0000000000 0044556678889999999998887775421 123333 389
Q ss_pred eEecCCCCCCCCCCCCccccccCCCcC--------------------------ChhhchHHHHHHH----HHHhCCCCCC
Q 010448 250 KGIVNGMDVQEWNPLTDKYIGVKYDAS--------------------------TVMDAKPLLKEAL----QAEVGLPVDR 299 (510)
Q Consensus 250 ~vIpngvd~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~----~~~~g~~~~~ 299 (510)
.-+.|||....|-......+...++.. .+...|..++..+ ..+.|+..++
T Consensus 406 ~nvTNGIt~rrWl~~~n~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p 485 (750)
T COG0058 406 NNVTNGITPRRWLAPANPGLADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDP 485 (750)
T ss_pred ccccCCcCCchhhhhhhHHHHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCC
Confidence 999999999888554433332222211 1122233333322 3356777778
Q ss_pred CCcEEEEecCcccccChhhHHHHHHhhhh-------CCcEEEEEecCCh------hHHHHHHHHHHHCC--CceEEeccC
Q 010448 300 NIPVIGFIGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTGKK------PMEKQLEQLEILYP--EKARGVAKF 364 (510)
Q Consensus 300 ~~~~i~~~Grl~~~Kg~~~li~a~~~l~~-------~~~~l~i~G~g~~------~~~~~~~~l~~~~~--~~v~~~~~~ 364 (510)
+.++++++-|+.++|...+.+.-+..+.. +.+++++.|+..+ .+-+.+...+...+ .+|.|...+
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nY 565 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNY 565 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCC
Confidence 89999999999999987766544444432 4577788887542 23333444444422 368999999
Q ss_pred CHHHHHHHHHhCcEEEeCCCC--CCccHHHHHHHHhCCCcEEecCCCccceEE--cCCceeEec
Q 010448 365 NIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMG 424 (510)
Q Consensus 365 ~~~~~~~~~~~adv~v~ps~~--E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~--~~~~G~l~~ 424 (510)
+-.....++.+|||-...|.. |.+|++-|-+|..|.+.|+|--|...|+.+ .+.|||+||
T Consensus 566 dvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 566 DVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred ChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 999999999999999998875 999999999999999999999999999996 789999996
No 108
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.20 E-value=4.8e-11 Score=95.12 Aligned_cols=89 Identities=22% Similarity=0.303 Sum_probs=77.2
Q ss_pred EEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHH
Q 010448 378 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 457 (510)
Q Consensus 378 v~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~ 457 (510)
+++.|+..++++..++|+||||+|||+++.+++.+++.++.+++.+ + |++++.+++..++++ ++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~----------~--~~~el~~~i~~ll~~--~~~~ 66 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITY----------N--DPEELAEKIEYLLEN--PEER 66 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEE----------C--CHHHHHHHHHHHHCC--HHHH
Confidence 4677888899999999999999999999999999999999888887 3 999999999999998 5555
Q ss_pred HHHHHHH---hhccCChHHHHHHHHH
Q 010448 458 AEMMKNG---MAQDLSWKGPAKKWEE 480 (510)
Q Consensus 458 ~~~~~~~---~~~~fs~~~~~~~~~~ 480 (510)
.++++++ +.++|||+..++++.+
T Consensus 67 ~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 67 RRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 5555554 6789999999998763
No 109
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.15 E-value=4.9e-08 Score=96.91 Aligned_cols=162 Identities=17% Similarity=0.180 Sum_probs=95.7
Q ss_pred CCcEEEEecCcccccChhhHH-HHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcE
Q 010448 300 NIPVIGFIGRLEEQKGSDILA-AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 378 (510)
Q Consensus 300 ~~~~i~~~Grl~~~Kg~~~li-~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv 378 (510)
++++|+.+|.=.-.+.+..++ ++...+.+ +++++....... +++ +.+.....+. .....|. +++..+|++||+
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~-~~~-~~~~~~~~~~--~~v~~f~-~dm~~~~~~ADL 255 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND-LEE-LKSAYNELGV--VRVLPFI-DDMAALLAAADL 255 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch-HHH-HHHHHhhcCc--EEEeeHH-hhHHHHHHhccE
Confidence 456777777633333343333 33344432 566555543331 333 3333333332 2223343 446679999999
Q ss_pred EEeCCCCCCccHHHHHHHHhCCCcEEecCCCc--------cceEEcCCceeEeccccccCCCCCcc--CHHHHHHHHHHH
Q 010448 379 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRA 448 (510)
Q Consensus 379 ~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~--------~e~v~~~~~G~l~~~~~~~~~~~~~~--d~~~la~~i~~l 448 (510)
+|. -+-++++.|..++|+|+|--..+.- ...+++.+.|.++ +.. +++.+.+.|.++
T Consensus 256 vIs----RaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i----------~~~~lt~~~l~~~i~~l 321 (357)
T COG0707 256 VIS----RAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVI----------RQSELTPEKLAELILRL 321 (357)
T ss_pred EEe----CCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEe----------ccccCCHHHHHHHHHHH
Confidence 993 3467999999999999997764433 2344455666666 333 589999999999
Q ss_pred HHhhCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHH
Q 010448 449 LATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 485 (510)
Q Consensus 449 l~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l 485 (510)
+++ ++.+.+|..++. ...-...++++.++...+
T Consensus 322 ~~~--~~~l~~m~~~a~--~~~~p~aa~~i~~~~~~~ 354 (357)
T COG0707 322 LSN--PEKLKAMAENAK--KLGKPDAAERIADLLLAL 354 (357)
T ss_pred hcC--HHHHHHHHHHHH--hcCCCCHHHHHHHHHHHH
Confidence 998 777777776653 233334445555544443
No 110
>PRK14986 glycogen phosphorylase; Provisional
Probab=99.01 E-value=9.2e-09 Score=109.58 Aligned_cols=293 Identities=18% Similarity=0.192 Sum_probs=187.2
Q ss_pred CCeEEEeccchhhhHHHHHHH-hhcCCCC-------CCCCcEEEEecCCCccc--ccCccchhhc-C--------CChhh
Q 010448 127 EDVVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLL-N--------LPAQF 187 (510)
Q Consensus 127 pD~iih~h~~~~~~~~~~l~~-~~~~~~~-------~~~~~~V~tiH~~~~~~--~~~~~~~~~~-~--------~~~~~ 187 (510)
+- +||.|+.|++++..-+.+ +....+. .....++||-|+..+.+ .||...+..+ + +...+
T Consensus 314 ~v-~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~~f 392 (815)
T PRK14986 314 KI-AIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYF 392 (815)
T ss_pred cc-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHccHhhhHHHHHHHHH
Confidence 44 999999998776544332 2211010 14567999999886655 4666555322 1 11112
Q ss_pred hccc-----------ccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCC
Q 010448 188 KSSF-----------DFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 256 (510)
Q Consensus 188 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngv 256 (510)
...+ ....-... -....+++-..++..|..|..||.-..+.+.+..... ... +-+.++.-+.|||
T Consensus 393 l~~~~~~~~~~~~~~~~~sii~~-~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~d--f~~-l~P~kf~niTNGV 468 (815)
T PRK14986 393 LKTLQEQYPNDTDLLGRASIIDE-SNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFAD--FAK-IFPGRFCNVTNGV 468 (815)
T ss_pred HHHHHHhCCCcHHHHhhhhcccc-CCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHH--HHh-hCCCcccccCCCC
Confidence 1111 00000000 0012456667788889999999997777653211000 000 1123677799999
Q ss_pred CCCCCCCCCcc--------ccccCCC----------------c--CChhhchHHHHHHH----HHHhCCCCCCCCcEEEE
Q 010448 257 DVQEWNPLTDK--------YIGVKYD----------------A--STVMDAKPLLKEAL----QAEVGLPVDRNIPVIGF 306 (510)
Q Consensus 257 d~~~~~~~~~~--------~~~~~~~----------------~--~~~~~~~~~~~~~~----~~~~g~~~~~~~~~i~~ 306 (510)
....|-...++ .+...+. . +.+.+.|..+|..+ +++.|+..+++.+.+++
T Consensus 469 ~~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~q 548 (815)
T PRK14986 469 TPRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQ 548 (815)
T ss_pred ChhhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccceeee
Confidence 99888631111 1111110 1 22334444444443 55678888888999999
Q ss_pred ecCcccccChhh-HHHHHHhh---hh-C-----CcEEEEEecCCh------hHHHHHHHHHH------HCCC--ceEEec
Q 010448 307 IGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGKK------PMEKQLEQLEI------LYPE--KARGVA 362 (510)
Q Consensus 307 ~Grl~~~Kg~~~-li~a~~~l---~~-~-----~~~l~i~G~g~~------~~~~~~~~l~~------~~~~--~v~~~~ 362 (510)
+-|+.++|...+ ++..+.++ ++ + +.++++.|+..+ .+-+.+.+++. ...+ +|.|..
T Consensus 549 akR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFle 628 (815)
T PRK14986 549 IKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIP 628 (815)
T ss_pred ehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEEeC
Confidence 999999999888 66664444 43 2 578999997542 23334444444 3333 689999
Q ss_pred cCCHHHHHHHHHhCcEEEeCCCC--CCccHHHHHHHHhCCCcEEecCCCccceEEc--CCceeEec
Q 010448 363 KFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 424 (510)
Q Consensus 363 ~~~~~~~~~~~~~adv~v~ps~~--E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~--~~~G~l~~ 424 (510)
.++-.....++.+||+-...|.. |.+|.+-+-+|..|.+.+++--|...|+.++ +.|||+||
T Consensus 629 nY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 629 NYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred CCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeC
Confidence 99999999999999999998875 9999999999999999999999999999886 78999985
No 111
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=98.91 E-value=8.5e-09 Score=109.37 Aligned_cols=295 Identities=14% Similarity=0.167 Sum_probs=184.6
Q ss_pred CCCeEEEeccchhhhHHHHHH-HhhcCCCC-------CCCCcEEEEecCCCccc--ccCccchhhc-C--------CChh
Q 010448 126 GEDVVFVANDWHTSLIPCYLK-TMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLL-N--------LPAQ 186 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~-~~~~~~~~-------~~~~~~V~tiH~~~~~~--~~~~~~~~~~-~--------~~~~ 186 (510)
.+. +||.|+.|++++..-+. .+....+. .....++||.|+..+.+ .||...+..+ + +..+
T Consensus 302 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~Lpr~~~ii~~in~~ 380 (798)
T PRK14985 302 DYE-VIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLLPRHMQIIKEINTR 380 (798)
T ss_pred CCc-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHHhHHHHHHHHHHHHH
Confidence 467 99999999876654433 22211111 13567999999876655 4666554322 1 1111
Q ss_pred hhcccc--cccCC-----CCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCC
Q 010448 187 FKSSFD--FIDGY-----NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ 259 (510)
Q Consensus 187 ~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~ 259 (510)
+..... +.... ........+++-..++..|..|..||.-..+.+.+.....+. . +-+.++.-+.|||...
T Consensus 381 fl~~~~~~~~~d~~~~~~~sii~~~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~--~-l~p~kf~nvTNGVt~r 457 (798)
T PRK14985 381 FKTLVEKTWPGDKKVWAKLAVVHDKQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYH--Q-LWPNKFHNVTNGITPR 457 (798)
T ss_pred HHHHHHHhCCCcHHHhhhhhhccCCeeehHHHHHHhcchhHhhHHHHhchhHHhhhhhhH--h-hCCCccCCcCCCcCcc
Confidence 111000 00000 000001235555667778888888888776654431100000 0 0123778899999998
Q ss_pred CCCCCCcc--------cccc-------------CCCc-CC----hhhchHHHHHH----HHHHhCCCCCCCCcEEEEecC
Q 010448 260 EWNPLTDK--------YIGV-------------KYDA-ST----VMDAKPLLKEA----LQAEVGLPVDRNIPVIGFIGR 309 (510)
Q Consensus 260 ~~~~~~~~--------~~~~-------------~~~~-~~----~~~~~~~~~~~----~~~~~g~~~~~~~~~i~~~Gr 309 (510)
.|-...++ .+.. ++.. .. +.+.|..+|.. ++++.|+..+++.+.++++-|
T Consensus 458 rWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~kR 537 (798)
T PRK14985 458 RWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDVQIKR 537 (798)
T ss_pred hhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchhhHhh
Confidence 88521111 1111 1111 12 23444444443 356678888888899999999
Q ss_pred cccccChhh-HHHHHHhhhh----C-----CcEEEEEecCCh------hHHHHHHHHHHHC------CC--ceEEeccCC
Q 010448 310 LEEQKGSDI-LAAAIPHFIK----E-----NVQIIVLGTGKK------PMEKQLEQLEILY------PE--KARGVAKFN 365 (510)
Q Consensus 310 l~~~Kg~~~-li~a~~~l~~----~-----~~~l~i~G~g~~------~~~~~~~~l~~~~------~~--~v~~~~~~~ 365 (510)
+.++|...+ ++..+.++.+ + +.++++.|+..+ .+-+.+.+++... ++ +|.|...++
T Consensus 538 ~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~ 617 (798)
T PRK14985 538 LHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFLPDYC 617 (798)
T ss_pred hhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEeCCCC
Confidence 999999888 6665544433 2 478999997542 2223444444322 23 689999999
Q ss_pred HHHHHHHHHhCcEEEeCCCC--CCccHHHHHHHHhCCCcEEecCCCccceEEc--CCceeEec
Q 010448 366 IPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 424 (510)
Q Consensus 366 ~~~~~~~~~~adv~v~ps~~--E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~--~~~G~l~~ 424 (510)
-.....++.+||+-...|.. |.+|++-+-+|..|.+.+++--|...|+.++ +.|||+||
T Consensus 618 VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 618 VSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFG 680 (798)
T ss_pred hHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeC
Confidence 99999999999999998874 9999999999999999999999999988875 78999984
No 112
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=98.91 E-value=3.1e-07 Score=96.77 Aligned_cols=291 Identities=17% Similarity=0.213 Sum_probs=164.7
Q ss_pred EEEeccchhhhHHHHH-HHhhcCCCC-------CCCCcEEEEecCCCccc--ccCccchhhc-C--------CChhhhcc
Q 010448 130 VFVANDWHTSLIPCYL-KTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLL-N--------LPAQFKSS 190 (510)
Q Consensus 130 iih~h~~~~~~~~~~l-~~~~~~~~~-------~~~~~~V~tiH~~~~~~--~~~~~~~~~~-~--------~~~~~~~~ 190 (510)
+||.|+.|++++..-+ +.+....++ ....-++||.|+.-+.+ .||...+... + +..++...
T Consensus 217 ~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~Lpr~~~ii~ein~~f~~~ 296 (713)
T PF00343_consen 217 VIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERYLPRHLEIIYEINRRFLDE 296 (713)
T ss_dssp EEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred EEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHHChHHHHHHHHHhHHHHHH
Confidence 9999999987765443 333322221 12446899999876655 4665554321 0 11111111
Q ss_pred cc-----------cccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCC
Q 010448 191 FD-----------FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ 259 (510)
Q Consensus 191 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~ 259 (510)
+. .+.-. ..-....+++-..++..|..|..||.-..+.+++....... . +.+.++.-|.|||...
T Consensus 297 ~~~~~~~d~~~~~~l~ii-~~~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~~f~--~-l~P~kf~nvTNGVh~r 372 (713)
T PF00343_consen 297 LRRKYPGDEDQIRRLSII-EEGNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFKDFY--E-LWPEKFGNVTNGVHPR 372 (713)
T ss_dssp HHHHSTT-HHHHHHHSSE-ETSSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTHHHH--H-HSGGGEEE----B-TC
T ss_pred HHHHhcCcchhhhhcccc-cccchhhcchhHHHHHhcccccchHHHHHHHHHHHHhhhhh--h-cCCceeeccccCccCc
Confidence 00 00000 00012356777888999999999999888877652111110 1 1234799999999999
Q ss_pred CCCCCCcc--------ccccCC-------------CcCC-----hhhchHHHH----HHHHHHhCCCCCCCCcEEEEecC
Q 010448 260 EWNPLTDK--------YIGVKY-------------DAST-----VMDAKPLLK----EALQAEVGLPVDRNIPVIGFIGR 309 (510)
Q Consensus 260 ~~~~~~~~--------~~~~~~-------------~~~~-----~~~~~~~~~----~~~~~~~g~~~~~~~~~i~~~Gr 309 (510)
.|-....+ ++...+ ..+. +.+.|..++ +.++++.|+..+++...++++-|
T Consensus 373 rWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR 452 (713)
T PF00343_consen 373 RWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARR 452 (713)
T ss_dssp CCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-
T ss_pred ccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhh
Confidence 98543211 111111 1111 111222222 23455678777778889999999
Q ss_pred cccccChhh-H---HHHHHhhhh------CCcEEEEEecCCh------hHHHHHHHHHH------HCCC--ceEEeccCC
Q 010448 310 LEEQKGSDI-L---AAAIPHFIK------ENVQIIVLGTGKK------PMEKQLEQLEI------LYPE--KARGVAKFN 365 (510)
Q Consensus 310 l~~~Kg~~~-l---i~a~~~l~~------~~~~l~i~G~g~~------~~~~~~~~l~~------~~~~--~v~~~~~~~ 365 (510)
+.++|...+ + ++.+.++++ .++++++.|+..+ .+-+.+.+++. ..++ +|.|...|+
T Consensus 453 ~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYd 532 (713)
T PF00343_consen 453 FHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYD 532 (713)
T ss_dssp SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-S
T ss_pred cccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCc
Confidence 999999877 3 344555554 2578999998543 22223333332 1223 689999999
Q ss_pred HHHHHHHHHhCcEEEeCCCC--CCccHHHHHHHHhCCCcEEecCCCccceEEc--CCceeEec
Q 010448 366 IPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 424 (510)
Q Consensus 366 ~~~~~~~~~~adv~v~ps~~--E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~--~~~G~l~~ 424 (510)
-.....++.++||.+..|+. |++|++-+-+|..|.+.+++-.|...|+.+. ..|.|+||
T Consensus 533 vslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG 595 (713)
T PF00343_consen 533 VSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFG 595 (713)
T ss_dssp HHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES
T ss_pred HHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcC
Confidence 99999999999999999875 9999999999999999999999999998764 46889984
No 113
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.90 E-value=7.5e-07 Score=89.72 Aligned_cols=214 Identities=14% Similarity=0.141 Sum_probs=128.4
Q ss_pred HhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecC-CCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHH
Q 010448 214 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN-GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 292 (510)
Q Consensus 214 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpn-gvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (510)
+-||..++.++...+.+.+ .|.+++ ++.++-| ++|.-.+.... .+..+.++
T Consensus 143 ~la~l~f~~t~~~~~~L~~---eg~~~~------~i~~tG~~~iD~l~~~~~~-------------------~~~~~~~~ 194 (365)
T TIGR03568 143 KLSHLHFVATEEYRQRVIQ---MGEDPD------RVFNVGSPGLDNILSLDLL-------------------SKEELEEK 194 (365)
T ss_pred HHHhhccCCCHHHHHHHHH---cCCCCC------cEEEECCcHHHHHHhhhcc-------------------CHHHHHHH
Confidence 4578899999999998886 566544 6776655 45532111100 14566778
Q ss_pred hCCCCCCCCcEEEEecCcc--c---ccChhhHHHHHHhhhhCCcEEEEE-e-cCChhHHHHHHHHHHHCCCceEEeccCC
Q 010448 293 VGLPVDRNIPVIGFIGRLE--E---QKGSDILAAAIPHFIKENVQIIVL-G-TGKKPMEKQLEQLEILYPEKARGVAKFN 365 (510)
Q Consensus 293 ~g~~~~~~~~~i~~~Grl~--~---~Kg~~~li~a~~~l~~~~~~l~i~-G-~g~~~~~~~~~~l~~~~~~~v~~~~~~~ 365 (510)
+|++.+ ..++++.+-+-+ . .+.+..+++++.++. .++.++.- + .+.....+.++++... ..++.+....+
T Consensus 195 lgl~~~-~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~-~~~~vi~P~~~p~~~~i~~~i~~~~~~-~~~v~l~~~l~ 271 (365)
T TIGR03568 195 LGIDLD-KPYALVTFHPVTLEKESAEEQIKELLKALDELN-KNYIFTYPNADAGSRIINEAIEEYVNE-HPNFRLFKSLG 271 (365)
T ss_pred hCCCCC-CCEEEEEeCCCcccccCchHHHHHHHHHHHHhc-cCCEEEEeCCCCCchHHHHHHHHHhcC-CCCEEEECCCC
Confidence 887532 234333333322 2 234555555555441 24433221 2 2233445556665332 23588888888
Q ss_pred HHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHH
Q 010448 366 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 445 (510)
Q Consensus 366 ~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i 445 (510)
-.+...+++.|+++|--| .|.. .||.++|+|||+- +.-+|.+..|.|++++ ..|++++.+++
T Consensus 272 ~~~~l~Ll~~a~~vitdS----Sggi-~EA~~lg~Pvv~l--~~R~e~~~~g~nvl~v-----------g~~~~~I~~a~ 333 (365)
T TIGR03568 272 QERYLSLLKNADAVIGNS----SSGI-IEAPSFGVPTINI--GTRQKGRLRADSVIDV-----------DPDKEEIVKAI 333 (365)
T ss_pred hHHHHHHHHhCCEEEEcC----hhHH-HhhhhcCCCEEee--cCCchhhhhcCeEEEe-----------CCCHHHHHHHH
Confidence 888888999999999333 2333 8999999999954 5677888778788765 46899999999
Q ss_pred HHHHHhhCHHHHHHHHHHHhhccCChHHHHHHHHHH
Q 010448 446 RRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 481 (510)
Q Consensus 446 ~~ll~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~ 481 (510)
.++++ +..+..+ ......|.....+++..++
T Consensus 334 ~~~~~---~~~~~~~--~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 334 EKLLD---PAFKKSL--KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred HHHhC---hHHHHHH--hhCCCCCCCChHHHHHHHh
Confidence 98543 2222222 1123457666666666553
No 114
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.90 E-value=1.7e-09 Score=104.82 Aligned_cols=319 Identities=15% Similarity=0.227 Sum_probs=172.4
Q ss_pred CCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCccccc-CccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 127 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 127 pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+-+|-|.|.|..+....+++.+. ..+-.|||-|..-. |++ .....+...-..++ +......+.-....
T Consensus 174 ~~vVahFHEW~AGVgL~l~R~rr------l~iaTifTTHATLL-GRyLCA~~~DfYNnLd~f----~vD~EAGkr~IYHr 242 (692)
T KOG3742|consen 174 TAVVAHFHEWQAGVGLILCRARR------LDIATIFTTHATLL-GRYLCAGNVDFYNNLDSF----DVDKEAGKRQIYHR 242 (692)
T ss_pred hHHHHHHHHHHhccchheehhcc------cceEEEeehhHHHH-HHHHhcccchhhhchhhc----ccchhhccchhHHH
Confidence 35577999999876655555432 37788999995432 222 10011110000000 00000011111123
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
..+++.+...|+...+||+-..-+-. .++++++=.+.|||.+...|..... +++.+...
T Consensus 243 YC~ERaa~h~AhVFTTVSeITa~EAe----------HlLkRKPD~itPNGLNV~KFsA~HE-----------FQNLHA~~ 301 (692)
T KOG3742|consen 243 YCLERAAAHTAHVFTTVSEITALEAE----------HLLKRKPDVITPNGLNVKKFSAVHE-----------FQNLHAQK 301 (692)
T ss_pred HHHHHHhhhhhhhhhhHHHHHHHHHH----------HHHhcCCCeeCCCCcceeehhHHHH-----------HHHHHHHH
Confidence 45567788889999999985433222 1122224456799999988765432 22233333
Q ss_pred HHHH----HHHh----CCCCCCCCcEEEEecCcc-cccChhhHHHHHHhhhh------CC---cEEEEEec-CC----h-
Q 010448 286 KEAL----QAEV----GLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK------EN---VQIIVLGT-GK----K- 341 (510)
Q Consensus 286 ~~~~----~~~~----g~~~~~~~~~i~~~Grl~-~~Kg~~~li~a~~~l~~------~~---~~l~i~G~-g~----~- 341 (510)
++.+ |..+ .... ++...+..+||.. ..||-|.+|+++++|.- .+ +-|+|+-. .+ +
T Consensus 302 KekIndFVRGHF~GhlDFdL-dkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVes 380 (692)
T KOG3742|consen 302 KEKINDFVRGHFHGHLDFDL-DKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVES 380 (692)
T ss_pred HHHHHHHhhhhccccccccc-cceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhh
Confidence 3333 3322 2222 2456788889986 69999999999999853 11 22333321 10 0
Q ss_pred --------h---------------------------HHH--------HHHHHHH-----HCC------------------
Q 010448 342 --------P---------------------------MEK--------QLEQLEI-----LYP------------------ 355 (510)
Q Consensus 342 --------~---------------------------~~~--------~~~~l~~-----~~~------------------ 355 (510)
. +.+ .+++... .++
T Consensus 381 LkgqAv~kqL~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~ 460 (692)
T KOG3742|consen 381 LKGQAVRKQLWDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSS 460 (692)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHH
Confidence 0 000 0011000 000
Q ss_pred -----------C--ceEEeccC-------CHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCcc----
Q 010448 356 -----------E--KARGVAKF-------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV---- 411 (510)
Q Consensus 356 -----------~--~v~~~~~~-------~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~---- 411 (510)
+ ++++...+ -+-+..++.+.|++.|+||.+||+|.+..|+--+|+|-|+|+..|+.
T Consensus 461 iRr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMe 540 (692)
T KOG3742|consen 461 IRRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFME 540 (692)
T ss_pred hHhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHH
Confidence 1 11222111 01123358899999999999999999999999999999999987754
Q ss_pred ceEEcC-Ccee-Eec-cccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHH----HhhccCChHHHHHHHHHHHHH
Q 010448 412 DTVEEG-FTGF-QMG-SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN----GMAQDLSWKGPAKKWEETLLN 484 (510)
Q Consensus 412 e~v~~~-~~G~-l~~-~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~----~~~~~fs~~~~~~~~~~~y~~ 484 (510)
|.|++. ..|+ +++ .|-. +.++.++|++-+.+.... ..++++.++ ....-.+|+.+...|.+.=..
T Consensus 541 ehi~d~~ayGIYIvDRRfks-----~deSv~qL~~~m~~F~~q---sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~l 612 (692)
T KOG3742|consen 541 EHIEDPQAYGIYIVDRRFKS-----PDESVQQLASFMYEFCKQ---SRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHL 612 (692)
T ss_pred HHhcCchhceEEEEecccCC-----hhhHHHHHHHHHHHHHHH---HHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHH
Confidence 444432 2343 333 2222 345667777777666653 222222222 245668899988877765444
Q ss_pred HH
Q 010448 485 LE 486 (510)
Q Consensus 485 l~ 486 (510)
.+
T Consensus 613 aL 614 (692)
T KOG3742|consen 613 AL 614 (692)
T ss_pred HH
Confidence 43
No 115
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.90 E-value=5.1e-08 Score=104.19 Aligned_cols=294 Identities=19% Similarity=0.202 Sum_probs=189.2
Q ss_pred CCCeEEEeccchhhhHHHHHH-HhhcCCCC-------CCCCcEEEEecCCCccc--ccCccchhhcC---------CChh
Q 010448 126 GEDVVFVANDWHTSLIPCYLK-TMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLN---------LPAQ 186 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~-~~~~~~~~-------~~~~~~V~tiH~~~~~~--~~~~~~~~~~~---------~~~~ 186 (510)
++. +||.|+.|++++..-+. .+....+. .....++||.|+..+.+ .||...+..+- +..+
T Consensus 300 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~lpr~~~II~~In~~ 378 (797)
T cd04300 300 DKV-AIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLLPRHLEIIYEINRR 378 (797)
T ss_pred Cce-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHHChHHHHHHHHHHHH
Confidence 367 99999999876654433 22211111 13567999999876544 46665543221 1111
Q ss_pred hhc----cc-------ccccCCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCC
Q 010448 187 FKS----SF-------DFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 255 (510)
Q Consensus 187 ~~~----~~-------~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpng 255 (510)
+.. .+ ..+.-... -....+++-..++..|..|..||.-..+.+++.....+ .. +-+.++.-+.||
T Consensus 379 ~~~~~~~~~~~~~~~~~~l~ii~~-~~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~~df--~~-l~P~kf~n~TNG 454 (797)
T cd04300 379 FLEEVRAKYPGDEDRIRRMSIIEE-GGEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDF--YE-LYPEKFNNKTNG 454 (797)
T ss_pred HHHHHHHhcCCCHHHHHhhccccc-CCCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhHHHH--Hh-hCCCccCCcCCC
Confidence 110 00 00000000 00124566677888999999999988877765200000 00 112377889999
Q ss_pred CCCCCCCCCCccc--------cccC-------------CC-c----CChhhchHHHHHHH----HHHhCCCCCCCCcEEE
Q 010448 256 MDVQEWNPLTDKY--------IGVK-------------YD-A----STVMDAKPLLKEAL----QAEVGLPVDRNIPVIG 305 (510)
Q Consensus 256 vd~~~~~~~~~~~--------~~~~-------------~~-~----~~~~~~~~~~~~~~----~~~~g~~~~~~~~~i~ 305 (510)
|....|-...++. +... +- . +.+.+.|..+|..+ +++.|+..+++.+.++
T Consensus 455 Vt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdv 534 (797)
T cd04300 455 ITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDV 534 (797)
T ss_pred CCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEEE
Confidence 9998885222111 1111 11 1 22345555555543 5577888888999999
Q ss_pred EecCcccccChhh-HHHHH---Hhhhh-C-----CcEEEEEecCCh------hHHHHHHHHHHH------CCC--ceEEe
Q 010448 306 FIGRLEEQKGSDI-LAAAI---PHFIK-E-----NVQIIVLGTGKK------PMEKQLEQLEIL------YPE--KARGV 361 (510)
Q Consensus 306 ~~Grl~~~Kg~~~-li~a~---~~l~~-~-----~~~l~i~G~g~~------~~~~~~~~l~~~------~~~--~v~~~ 361 (510)
++-|+.++|...+ ++..+ .++++ + +.++++.|+..+ .+-+.+.+++.. ..+ +|.|.
T Consensus 535 q~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFl 614 (797)
T cd04300 535 QVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFL 614 (797)
T ss_pred EeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceEEEEe
Confidence 9999999999888 55554 44443 2 378999997542 233344444442 233 68999
Q ss_pred ccCCHHHHHHHHHhCcEEEeCCCC--CCccHHHHHHHHhCCCcEEecCCCccceEEc--CCceeEec
Q 010448 362 AKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 424 (510)
Q Consensus 362 ~~~~~~~~~~~~~~adv~v~ps~~--E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~--~~~G~l~~ 424 (510)
..++-.....++.+||+-...|.. |.+|++-+-+|..|.+.++|--|...|+.++ +.|+|+||
T Consensus 615 enY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 615 PNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFG 681 (797)
T ss_pred CCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeC
Confidence 999999999999999999998874 9999999999999999999999999998887 78999995
No 116
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=98.88 E-value=2.4e-08 Score=106.16 Aligned_cols=291 Identities=20% Similarity=0.218 Sum_probs=189.4
Q ss_pred CCCeEEEeccchhhhHHHHHHH-hhcCCCC-------CCCCcEEEEecCCCccc--ccCccchhh-c--------CCChh
Q 010448 126 GEDVVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGL-L--------NLPAQ 186 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~-~~~~~~~-------~~~~~~V~tiH~~~~~~--~~~~~~~~~-~--------~~~~~ 186 (510)
.+. +||.|+.|++++..-+.+ +....+. .....++||.|+..+.+ .||...+.. + .+..+
T Consensus 297 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~ 375 (794)
T TIGR02093 297 KKV-AIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRR 375 (794)
T ss_pred cce-EEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHH
Confidence 366 999999998766544332 2211110 13567899999876655 466655432 1 22222
Q ss_pred hhcccc--ccc---------CCCCCCCCCcchHHHHHHHhccceeecCHHHHHHHhcCC---CCCCchhhhhhcCCceEe
Q 010448 187 FKSSFD--FID---------GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGI 252 (510)
Q Consensus 187 ~~~~~~--~~~---------~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~ki~vI 252 (510)
+..... +.. -... -....+++-..++..|..|..||.-..+.+++.. .+.+= +.++.-+
T Consensus 376 fl~~~~~~~p~d~~~~~~~sii~~-~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l~------P~kf~n~ 448 (794)
T TIGR02093 376 FLAELAAKGPGDEAKIRRMSIIEE-GQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELY------PEKFNNK 448 (794)
T ss_pred HHHHHHHhCCCcHHHHhheeeeec-CCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhC------CCccCCc
Confidence 222111 000 0000 0012466667788899999999998887776410 01111 2377889
Q ss_pred cCCCCCCCCCCCCccc--------cccC-------------CCc-----CChhhchHHHHHHH----HHHhCCCCCCCCc
Q 010448 253 VNGMDVQEWNPLTDKY--------IGVK-------------YDA-----STVMDAKPLLKEAL----QAEVGLPVDRNIP 302 (510)
Q Consensus 253 pngvd~~~~~~~~~~~--------~~~~-------------~~~-----~~~~~~~~~~~~~~----~~~~g~~~~~~~~ 302 (510)
.|||.+..|-...++. +... +.. +.+.+.|..+|..+ +++.|+..+++.+
T Consensus 449 TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~sl 528 (794)
T TIGR02093 449 TNGITPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSI 528 (794)
T ss_pred CCCCCccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCcccc
Confidence 9999998886222211 1111 111 23344455555443 5577888888889
Q ss_pred EEEEecCcccccChhh-HHHHHHh---hhh-C-----CcEEEEEecCCh------hHHHHHHHHHHH------CCC--ce
Q 010448 303 VIGFIGRLEEQKGSDI-LAAAIPH---FIK-E-----NVQIIVLGTGKK------PMEKQLEQLEIL------YPE--KA 358 (510)
Q Consensus 303 ~i~~~Grl~~~Kg~~~-li~a~~~---l~~-~-----~~~l~i~G~g~~------~~~~~~~~l~~~------~~~--~v 358 (510)
..+++-|+.++|...+ ++..+.+ +++ + +.++++.|+..+ .+-+.+.+.+.. ..+ +|
T Consensus 529 fdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkV 608 (794)
T TIGR02093 529 FDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKV 608 (794)
T ss_pred chhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeE
Confidence 9999999999999888 5555444 443 2 568999997542 233334444432 223 68
Q ss_pred EEeccCCHHHHHHHHHhCcEEEeCCCC--CCccHHHHHHHHhCCCcEEecCCCccceEEc--CCceeEec
Q 010448 359 RGVAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 424 (510)
Q Consensus 359 ~~~~~~~~~~~~~~~~~adv~v~ps~~--E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~--~~~G~l~~ 424 (510)
.|...++-.....++.+||+-...|.. |.+|.+-+-+|..|.+.++|--|...|+.++ +.|+|+||
T Consensus 609 VFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG 678 (794)
T TIGR02093 609 VFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFG 678 (794)
T ss_pred EEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcC
Confidence 999999999999999999999998874 9999999999999999999999999998887 78999984
No 117
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.77 E-value=2.4e-07 Score=82.41 Aligned_cols=160 Identities=16% Similarity=0.131 Sum_probs=98.1
Q ss_pred chhhhhHHHHHHHCCCcEEEEeeCCCCcccccCCcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCCCc
Q 010448 3 NASSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSK 82 (510)
Q Consensus 3 ~~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~~~ 82 (510)
+..+++|+..|+++||+|+|.|.....-. .....+|++++.++.|..-+
T Consensus 20 ET~ve~L~~~l~~~g~~v~Vyc~~~~~~~----------------------~~~~y~gv~l~~i~~~~~g~--------- 68 (185)
T PF09314_consen 20 ETFVEELAPRLVSKGIDVTVYCRSDYYPY----------------------KEFEYNGVRLVYIPAPKNGS--------- 68 (185)
T ss_pred HHHHHHHHHHHhcCCceEEEEEccCCCCC----------------------CCcccCCeEEEEeCCCCCCc---------
Confidence 46789999999999999999997532111 01234799999886653211
Q ss_pred ccCCCCCCCCCChHHHHHHHHHHHHHhh---hhcCcCCCCCCCCCCCCCeEEEeccch-hhhHHHHHHHhhcCCCCCCCC
Q 010448 83 IYGPRTGEDYQDNQLRFSLLCQAALEAP---RILNLNSNKYFSGPYGEDVVFVANDWH-TSLIPCYLKTMYKPKGMYKSA 158 (510)
Q Consensus 83 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~pD~iih~h~~~-~~~~~~~l~~~~~~~~~~~~~ 158 (510)
...+.....++...+ +.-+ .+.| |+|++... +.++..+++.... .|.
T Consensus 69 -------------~~si~yd~~sl~~al~~~~~~~----------~~~~-ii~ilg~~~g~~~~~~~r~~~~-----~g~ 119 (185)
T PF09314_consen 69 -------------AESIIYDFLSLLHALRFIKQDK----------IKYD-IILILGYGIGPFFLPFLRKLRK-----KGG 119 (185)
T ss_pred -------------hHHHHHHHHHHHHHHHHHhhcc----------ccCC-EEEEEcCCccHHHHHHHHhhhh-----cCC
Confidence 112222222222222 2221 2378 88988765 4444444444321 378
Q ss_pred cEEEEecCCCccc-ccCccchhhcCCChhhhcccccccCCCCCCCCCcc-hHHHHHHHhccceeecCHHHHHHHhcCCCC
Q 010448 159 KVVFCIHNIAYQG-RFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVLTVSPHYAQELVSGEDK 236 (510)
Q Consensus 159 ~~V~tiH~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~ 236 (510)
|+++++|++++.. .|.. ..+ ..+ ..++.+.+.||.+|+.|+.+.+.+.+. +
T Consensus 120 ~v~vN~DGlEWkR~KW~~--------~~k-----------------~~lk~~E~~avk~ad~lIaDs~~I~~y~~~~--y 172 (185)
T PF09314_consen 120 KVVVNMDGLEWKRAKWGR--------PAK-----------------KYLKFSEKLAVKYADRLIADSKGIQDYIKER--Y 172 (185)
T ss_pred cEEECCCcchhhhhhcCH--------HHH-----------------HHHHHHHHHHHHhCCEEEEcCHHHHHHHHHH--c
Confidence 9999999887632 1110 000 111 123667899999999999999999864 4
Q ss_pred CCchhhhhhcCCceEecCCCC
Q 010448 237 GVELDNIIRKTGIKGIVNGMD 257 (510)
Q Consensus 237 g~~~~~~~~~~ki~vIpngvd 257 (510)
+- .+..+|++|.|
T Consensus 173 ~~--------~~s~~IaYGad 185 (185)
T PF09314_consen 173 GR--------KKSTFIAYGAD 185 (185)
T ss_pred CC--------CCcEEecCCCC
Confidence 41 26889999976
No 118
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.64 E-value=6.4e-06 Score=82.18 Aligned_cols=287 Identities=13% Similarity=0.096 Sum_probs=153.4
Q ss_pred HHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCc
Q 010448 96 QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAF 175 (510)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~ 175 (510)
....+.....+...+.+. +||+|+..-|-...+++.+.... .++| |.++|.--..+...
T Consensus 49 ~~~~~~~~~~~~~~~~~~------------~Pd~Vlv~GD~~~~la~alaA~~-------~~ip-v~HieaGlRs~d~~- 107 (346)
T PF02350_consen 49 AKSTGLAIIELADVLERE------------KPDAVLVLGDRNEALAAALAAFY-------LNIP-VAHIEAGLRSGDRT- 107 (346)
T ss_dssp HHHHHHHHHHHHHHHHHH------------T-SEEEEETTSHHHHHHHHHHHH-------TT-E-EEEES-----S-TT-
T ss_pred HHHHHHHHHHHHHHHHhc------------CCCEEEEEcCCchHHHHHHHHHH-------hCCC-EEEecCCCCccccC-
Confidence 344444445555555554 49965555577777777776665 4899 56666320000000
Q ss_pred cchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHH-HhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecC
Q 010448 176 EDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 254 (510)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpn 254 (510)
.+.+ -+..|.++ +-||..++.++..++.+.+ .|.+++ +|.++=|
T Consensus 108 -----~g~~---------------------de~~R~~i~~la~lhf~~t~~~~~~L~~---~G~~~~------rI~~vG~ 152 (346)
T PF02350_consen 108 -----EGMP---------------------DEINRHAIDKLAHLHFAPTEEARERLLQ---EGEPPE------RIFVVGN 152 (346)
T ss_dssp -----SSTT---------------------HHHHHHHHHHH-SEEEESSHHHHHHHHH---TT--GG------GEEE---
T ss_pred -----CCCc---------------------hhhhhhhhhhhhhhhccCCHHHHHHHHh---cCCCCC------eEEEECh
Confidence 0111 12334333 4699999999999999998 788766 7777754
Q ss_pred C-CCCCCCCCCCccccccCCCcCChhhchHHHHHHH-HHHh-CCCCCCCCcEEEEecCccc---ccChhhHHHHHHhhhh
Q 010448 255 G-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL-QAEV-GLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIK 328 (510)
Q Consensus 255 g-vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-g~~~~~~~~~i~~~Grl~~---~Kg~~~li~a~~~l~~ 328 (510)
- +|.-... +......+ ...+ +.. .+.++++..=+.+. ......+.++++.+.+
T Consensus 153 ~~~D~l~~~-------------------~~~~~~~~~~~~i~~~~--~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~ 211 (346)
T PF02350_consen 153 PGIDALLQN-------------------KEEIEEKYKNSGILQDA--PKPYILVTLHPVTNEDNPERLEQILEALKALAE 211 (346)
T ss_dssp HHHHHHHHH-------------------HHTTCC-HHHHHHHHCT--TSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHH
T ss_pred HHHHHHHHh-------------------HHHHhhhhhhHHHHhcc--CCCEEEEEeCcchhcCChHHHHHHHHHHHHHHh
Confidence 2 3311000 00000000 1111 011 23344444434332 3446677777777776
Q ss_pred -CCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHH-HHHHhCCCcEEec
Q 010448 329 -ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQL-HAMRYGTVPIVAS 406 (510)
Q Consensus 329 -~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~-Eama~G~Pvv~s~ 406 (510)
+++.+++.....+.....+.+...++ .++.........+.-.+++.|+++|-- +| .+. ||..+|+|||.-+
T Consensus 212 ~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~~l~ll~~a~~vvgd-----Ss-GI~eEa~~lg~P~v~iR 284 (346)
T PF02350_consen 212 RQNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEEYLSLLKNADLVVGD-----SS-GIQEEAPSLGKPVVNIR 284 (346)
T ss_dssp HTTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHHHHHHHHHESEEEES-----SH-HHHHHGGGGT--EEECS
T ss_pred cCCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHHHHHHHhcceEEEEc-----Cc-cHHHHHHHhCCeEEEec
Confidence 48999998886666666776666666 378888888888888899999999833 35 566 9999999999995
Q ss_pred C-CCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHHhhccCChHHHHHHHHHHH
Q 010448 407 T-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETL 482 (510)
Q Consensus 407 ~-gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 482 (510)
. |.-.+.+..+.+-+ + ..|.+++.+++.+++++ ...+.++.. ....|.-...+++..+++
T Consensus 285 ~~geRqe~r~~~~nvl-v-----------~~~~~~I~~ai~~~l~~--~~~~~~~~~--~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 285 DSGERQEGRERGSNVL-V-----------GTDPEAIIQAIEKALSD--KDFYRKLKN--RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp SS-S-HHHHHTTSEEE-E-----------TSSHHHHHHHHHHHHH---HHHHHHHHC--S--TT-SS-HHHHHHHHH
T ss_pred CCCCCHHHHhhcceEE-e-----------CCCHHHHHHHHHHHHhC--hHHHHhhcc--CCCCCCCCcHHHHHHHhh
Confidence 4 44455555554444 5 48999999999999986 334333321 234566666666666655
No 119
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.62 E-value=5.3e-07 Score=77.58 Aligned_cols=129 Identities=18% Similarity=0.212 Sum_probs=76.7
Q ss_pred chhhhhHHHHHHHCCCcEEEEeeCCCCcccccCCcEEEEEEeCCeEEEEEEEEEeeCCceEEEEeCccccccccCCCCCc
Q 010448 3 NASSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSK 82 (510)
Q Consensus 3 ~~~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~p~~~~~~~~~~~~~ 82 (510)
...+..++++|+++||+|+|+++..+. ... ...+|++++.++.+ . + .
T Consensus 10 ~~~~~~~~~~L~~~g~~V~ii~~~~~~-~~~----------------------~~~~~i~~~~~~~~--~-k-------~ 56 (139)
T PF13477_consen 10 STFIYNLAKELKKRGYDVHIITPRNDY-EKY----------------------EIIEGIKVIRLPSP--R-K-------S 56 (139)
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcCCCc-hhh----------------------hHhCCeEEEEecCC--C-C-------c
Confidence 345678999999999999999996332 110 11357777777432 0 0 0
Q ss_pred ccCCCCCCCCCChHHHHHHHHHHHHHhhhhcCcCCCCCCCCCCCCCeEEEeccchh-hhHHHHHHHhhcCCCCCCCCcEE
Q 010448 83 IYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-SLIPCYLKTMYKPKGMYKSAKVV 161 (510)
Q Consensus 83 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~iih~h~~~~-~~~~~~l~~~~~~~~~~~~~~~V 161 (510)
...+... ..+...+++. +|| |||+|...+ ++++.++++.. ..+|+|
T Consensus 57 -------------~~~~~~~-~~l~k~ik~~------------~~D-vIh~h~~~~~~~~~~l~~~~~------~~~~~i 103 (139)
T PF13477_consen 57 -------------PLNYIKY-FRLRKIIKKE------------KPD-VIHCHTPSPYGLFAMLAKKLL------KNKKVI 103 (139)
T ss_pred -------------cHHHHHH-HHHHHHhccC------------CCC-EEEEecCChHHHHHHHHHHHc------CCCCEE
Confidence 0111111 1333444443 599 999998776 66666665542 238999
Q ss_pred EEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCcchHHHHHHHhccceeecC
Q 010448 162 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 223 (510)
Q Consensus 162 ~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS 223 (510)
++.|+...... + ....+ ...+++.+++.+|.|++.|
T Consensus 104 ~~~hg~~~~~~-~--------~~~~~-----------------~~~~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 104 YTVHGSDFYNS-S--------KKKKL-----------------KKFIIKFAFKRADKIIVQS 139 (139)
T ss_pred EEecCCeeecC-C--------chHHH-----------------HHHHHHHHHHhCCEEEEcC
Confidence 99996532000 0 00000 1235578899999999876
No 120
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.61 E-value=2.2e-05 Score=79.99 Aligned_cols=190 Identities=15% Similarity=0.055 Sum_probs=110.8
Q ss_pred HHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHH
Q 010448 212 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 291 (510)
Q Consensus 212 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (510)
.-+.||.|.+..+...+.+.+ .|+ ++.++=|.+-.. +.... + .
T Consensus 157 ~~~~a~~v~~~~~~t~~~l~~---~g~---------k~~~vGnPv~d~-l~~~~--------------------~----~ 199 (396)
T TIGR03492 157 RSRRCLAVFVRDRLTARDLRR---QGV---------RASYLGNPMMDG-LEPPE--------------------R----K 199 (396)
T ss_pred hchhhCEEeCCCHHHHHHHHH---CCC---------eEEEeCcCHHhc-Ccccc--------------------c----c
Confidence 446799999999988888875 332 456666554221 11100 0 0
Q ss_pred HhCCCCCCCCcEEEEecCc--ccccChhhHHHHHHhhhh-CCcEEEEEecCChhHHHHHHHHHHHCCC------------
Q 010448 292 EVGLPVDRNIPVIGFIGRL--EEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPE------------ 356 (510)
Q Consensus 292 ~~g~~~~~~~~~i~~~Grl--~~~Kg~~~li~a~~~l~~-~~~~l~i~G~g~~~~~~~~~~l~~~~~~------------ 356 (510)
+++.+ ...+++..|.- ...+++..+++++..+.+ +++++++.-.+.... +.+++...+.+.
T Consensus 200 --~l~~~-~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 200 --PLLTG-RFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSL-EKLQAILEDLGWQLEGSSEDQTSL 275 (396)
T ss_pred --ccCCC-CCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCH-HHHHHHHHhcCceecCCccccchh
Confidence 33221 22344455544 234567899999999864 477776654222112 223333332211
Q ss_pred ----ceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCcc---ceEEcC----CceeEecc
Q 010448 357 ----KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV---DTVEEG----FTGFQMGS 425 (510)
Q Consensus 357 ----~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~---e~v~~~----~~G~l~~~ 425 (510)
.+.... + ..++..+|++||++|..| |.+..|++++|+|+|.....+.. .+.+.. +.++.+
T Consensus 276 ~~~~~~~v~~-~-~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l-- 346 (396)
T TIGR03492 276 FQKGTLEVLL-G-RGAFAEILHWADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFL-- 346 (396)
T ss_pred hccCceEEEe-c-hHhHHHHHHhCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEec--
Confidence 122222 2 234567999999999875 66669999999999998743321 111210 122322
Q ss_pred ccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHH
Q 010448 426 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 461 (510)
Q Consensus 426 ~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~ 461 (510)
...+++.+++++..+++| ++.+.++.
T Consensus 347 --------~~~~~~~l~~~l~~ll~d--~~~~~~~~ 372 (396)
T TIGR03492 347 --------ASKNPEQAAQVVRQLLAD--PELLERCR 372 (396)
T ss_pred --------CCCCHHHHHHHHHHHHcC--HHHHHHHH
Confidence 456789999999999997 55555554
No 121
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.45 E-value=4.1e-05 Score=74.15 Aligned_cols=96 Identities=15% Similarity=0.137 Sum_probs=68.9
Q ss_pred cEEEEecCcccccChhhHHHHHHhhhhCCcE-EEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEE
Q 010448 302 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQ-IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 380 (510)
Q Consensus 302 ~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~-l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v 380 (510)
.+++..|..++.+....+++++.++. .+.+ .+++|.+.+. .+.+++.....+ ++... .+ .+++.++|+.||++|
T Consensus 172 ~iLi~~GG~d~~~~~~~~l~~l~~~~-~~~~i~vv~G~~~~~-~~~l~~~~~~~~-~i~~~-~~-~~~m~~lm~~aDl~I 246 (279)
T TIGR03590 172 RVLVSFGGADPDNLTLKLLSALAESQ-INISITLVTGSSNPN-LDELKKFAKEYP-NIILF-ID-VENMAELMNEADLAI 246 (279)
T ss_pred eEEEEeCCcCCcCHHHHHHHHHhccc-cCceEEEEECCCCcC-HHHHHHHHHhCC-CEEEE-eC-HHHHHHHHHHCCEEE
Confidence 57889998888777788888887763 2333 3477876543 345666655544 45533 23 355667999999999
Q ss_pred eCCCCCCccHHHHHHHHhCCCcEEecC
Q 010448 381 IPSRFEPCGLIQLHAMRYGTVPIVAST 407 (510)
Q Consensus 381 ~ps~~E~~g~~~~Eama~G~Pvv~s~~ 407 (510)
.+ .|.++.|++++|+|+|+...
T Consensus 247 s~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 247 GA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred EC-----CchHHHHHHHcCCCEEEEEe
Confidence 74 57999999999999998765
No 122
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.41 E-value=2.7e-05 Score=76.91 Aligned_cols=209 Identities=18% Similarity=0.103 Sum_probs=133.5
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 285 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (510)
-.+.+..+++.|.|++.|+..++.+.+ .|.+ ++.+.-| ........ ..-...
T Consensus 168 ~~~~~~~~~~i~li~aQse~D~~Rf~~---LGa~--------~v~v~GN---lKfd~~~~--------------~~~~~~ 219 (419)
T COG1519 168 KFLARLLFKNIDLILAQSEEDAQRFRS---LGAK--------PVVVTGN---LKFDIEPP--------------PQLAAE 219 (419)
T ss_pred HHHHHHHHHhcceeeecCHHHHHHHHh---cCCc--------ceEEecc---eeecCCCC--------------hhhHHH
Confidence 355678899999999999999999998 6765 4444433 22111110 011223
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCCCceEEecc
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 363 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~ 363 (510)
...+|.+++.+ +++++..+.... --+.+++++..+++ +|..++++=.-++ --+.+++++.+.+-.+..+-.
T Consensus 220 ~~~~r~~l~~~----r~v~iaaSTH~G--Eeei~l~~~~~l~~~~~~~llIlVPRHpE-Rf~~v~~l~~~~gl~~~~rS~ 292 (419)
T COG1519 220 LAALRRQLGGH----RPVWVAASTHEG--EEEIILDAHQALKKQFPNLLLILVPRHPE-RFKAVENLLKRKGLSVTRRSQ 292 (419)
T ss_pred HHHHHHhcCCC----CceEEEecCCCc--hHHHHHHHHHHHHhhCCCceEEEecCChh-hHHHHHHHHHHcCCeEEeecC
Confidence 45667777753 468888888322 23568899999887 5777777655443 345566666655432222211
Q ss_pred --------------CCHHHHHHHHHhCcEEEeC-CCCCCccHHHHHHHHhCCCcEEec----CCCccceEEcCCceeEec
Q 010448 364 --------------FNIPLAHMIIAGADFILIP-SRFEPCGLIQLHAMRYGTVPIVAS----TGGLVDTVEEGFTGFQMG 424 (510)
Q Consensus 364 --------------~~~~~~~~~~~~adv~v~p-s~~E~~g~~~~Eama~G~Pvv~s~----~gg~~e~v~~~~~G~l~~ 424 (510)
--++ +..+|..+|+.++- |..+--|--++|+.++|+|||.-. ...+.+.+...+.|+.+
T Consensus 293 ~~~~~~~tdV~l~DtmGE-L~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v- 370 (419)
T COG1519 293 GDPPFSDTDVLLGDTMGE-LGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQV- 370 (419)
T ss_pred CCCCCCCCcEEEEecHhH-HHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEE-
Confidence 1123 44699999998775 555555667999999999999764 23333344445567765
Q ss_pred cccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 010448 425 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG 464 (510)
Q Consensus 425 ~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~ 464 (510)
+|.+.+++++..++++ ++.+.++++++
T Consensus 371 -----------~~~~~l~~~v~~l~~~--~~~r~~~~~~~ 397 (419)
T COG1519 371 -----------EDADLLAKAVELLLAD--EDKREAYGRAG 397 (419)
T ss_pred -----------CCHHHHHHHHHHhcCC--HHHHHHHHHHH
Confidence 5688888888888887 66666666665
No 123
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.38 E-value=7.5e-05 Score=76.55 Aligned_cols=124 Identities=19% Similarity=0.185 Sum_probs=82.0
Q ss_pred CCcEEEEecCccc---ccChhhHHHHHHhhhhCCcEEE-EEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHh
Q 010448 300 NIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 375 (510)
Q Consensus 300 ~~~~i~~~Grl~~---~Kg~~~li~a~~~l~~~~~~l~-i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 375 (510)
...+++..|.... .+....+++++..+ +.+++ .+|..... . ...+.++.....++.. .++..
T Consensus 239 ~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---~~~~i~~~g~~~~~--~------~~~~~~v~~~~~~p~~---~ll~~ 304 (401)
T cd03784 239 RPPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLG--A------EDLPDNVRVVDFVPHD---WLLPR 304 (401)
T ss_pred CCcEEEeCCCCcccCHHHHHHHHHHHHHHc---CCeEEEEccCcccc--c------cCCCCceEEeCCCCHH---HHhhh
Confidence 3467778888753 34455666666654 55544 45544311 1 2234467666655533 47999
Q ss_pred CcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC----ccceEEcCCceeEeccccccCCCCCcc--CHHHHHHHHHHHH
Q 010448 376 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 449 (510)
Q Consensus 376 adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e~v~~~~~G~l~~~~~~~~~~~~~~--d~~~la~~i~~ll 449 (510)
||++| .-+-..++.||+++|+|+|+....+ ..+.+...+.|..+ ... +.+++.+++.+++
T Consensus 305 ~d~~I----~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l----------~~~~~~~~~l~~al~~~l 370 (401)
T cd03784 305 CAAVV----HHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPAL----------DPRELTAERLAAALRRLL 370 (401)
T ss_pred hheee----ecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCC----------CcccCCHHHHHHHHHHHh
Confidence 99999 3344689999999999999997654 23344555677765 333 7899999999999
Q ss_pred Hh
Q 010448 450 AT 451 (510)
Q Consensus 450 ~~ 451 (510)
++
T Consensus 371 ~~ 372 (401)
T cd03784 371 DP 372 (401)
T ss_pred CH
Confidence 85
No 124
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.36 E-value=7.6e-05 Score=73.47 Aligned_cols=173 Identities=20% Similarity=0.195 Sum_probs=95.8
Q ss_pred HHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEe-cCCCCCCC----CCCCCccccccCCCcCChhhchHHHHH
Q 010448 213 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI-VNGMDVQE----WNPLTDKYIGVKYDASTVMDAKPLLKE 287 (510)
Q Consensus 213 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vI-pngvd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (510)
+-.||.|++++-.-...+.+ +|.. -.+. +||++.-. |.| ..
T Consensus 123 ~Pla~~i~~P~~~~~~~~~~---~G~~---------~~i~~y~G~~E~ayl~~F~P----------------------d~ 168 (335)
T PF04007_consen 123 LPLADVIITPEAIPKEFLKR---FGAK---------NQIRTYNGYKELAYLHPFKP----------------------DP 168 (335)
T ss_pred hhcCCeeECCcccCHHHHHh---cCCc---------CCEEEECCeeeEEeecCCCC----------------------Ch
Confidence 34589999887655555544 3422 1344 77877433 333 34
Q ss_pred HHHHHhCCCCCCCCcEEEEecCccccc-----Ch-hhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEe
Q 010448 288 ALQAEVGLPVDRNIPVIGFIGRLEEQK-----GS-DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 361 (510)
Q Consensus 288 ~~~~~~g~~~~~~~~~i~~~Grl~~~K-----g~-~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~ 361 (510)
.+.+++|+. ++ ++|+. |..+.+ |- ..+-+++++|.+..-.++++-...+ .. ++..+++ +..
T Consensus 169 ~vl~~lg~~--~~-~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~-~~----~~~~~~~--~~i- 235 (335)
T PF04007_consen 169 EVLKELGLD--DE-PYIVV--RPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED-QR----ELFEKYG--VII- 235 (335)
T ss_pred hHHHHcCCC--CC-CEEEE--EeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc-hh----hHHhccC--ccc-
Confidence 667888865 23 33332 433322 22 3344666666553322555553331 11 1222322 211
Q ss_pred ccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC---ccceEEcCCceeEeccccccCCCCCccCH
Q 010448 362 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDV 438 (510)
Q Consensus 362 ~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg---~~e~v~~~~~G~l~~~~~~~~~~~~~~d~ 438 (510)
..-+ -+...++.-||++|- +.|....||...|+|+|.+..|- .-+.+. ..|+++ ...|+
T Consensus 236 ~~~~-vd~~~Ll~~a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~----------~~~~~ 297 (335)
T PF04007_consen 236 PPEP-VDGLDLLYYADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLY----------HSTDP 297 (335)
T ss_pred cCCC-CCHHHHHHhcCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeE----------ecCCH
Confidence 1111 122368999999993 34677899999999999876543 223332 357777 77899
Q ss_pred HHHHHHHHHHHH
Q 010448 439 AAVSTTVRRALA 450 (510)
Q Consensus 439 ~~la~~i~~ll~ 450 (510)
+++.+.+.+.+.
T Consensus 298 ~ei~~~v~~~~~ 309 (335)
T PF04007_consen 298 DEIVEYVRKNLG 309 (335)
T ss_pred HHHHHHHHHhhh
Confidence 998886655443
No 125
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.31 E-value=4.8e-05 Score=75.33 Aligned_cols=119 Identities=18% Similarity=0.255 Sum_probs=80.2
Q ss_pred CCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEE
Q 010448 300 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 379 (510)
Q Consensus 300 ~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~ 379 (510)
...+++++|..... .++++++.+ ++..++++|.+..+ ....++.. ..+......++|++||++
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~--~~~~~~v~g~~~~~----------~~~~ni~~-~~~~~~~~~~~m~~ad~v 254 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKAL--PDYQFIVFGPNAAD----------PRPGNIHV-RPFSTPDFAELMAAADLV 254 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhC--CCCeEEEEcCCccc----------ccCCCEEE-eecChHHHHHHHHhCCEE
Confidence 44689999998766 667777776 46888888766311 01334654 445556667899999999
Q ss_pred EeCCCCCCccH-HHHHHHHhCCCcEEecCCCccc------eEEcCCceeEeccccccCCCCCccCHHHHHHHHHHH
Q 010448 380 LIPSRFEPCGL-IQLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 448 (510)
Q Consensus 380 v~ps~~E~~g~-~~~Eama~G~Pvv~s~~gg~~e------~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~l 448 (510)
|... |. ++.|++++|+|+|+-...+..| .+++.+.|..+. ...-+++.|.++|.++
T Consensus 255 Is~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~--------~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 255 ISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLS--------QEDLTPERLAEFLERL 317 (318)
T ss_pred EECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcc--------cccCCHHHHHHHHhcC
Confidence 9543 44 4999999999999998766444 333445555540 1234678888887653
No 126
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.26 E-value=4.7e-05 Score=77.54 Aligned_cols=176 Identities=16% Similarity=0.077 Sum_probs=102.8
Q ss_pred HHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCC---CceEEeccC
Q 010448 290 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAKF 364 (510)
Q Consensus 290 ~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~---~~v~~~~~~ 364 (510)
|+.+|+|. +.++++...++ .|=-+..++++.++.+ |+.+|++...+. ..++.+++...+.+ +++.+....
T Consensus 276 R~~~gLp~--d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~-~~~~~l~~~~~~~Gv~~~Ri~f~~~~ 350 (468)
T PF13844_consen 276 RAQYGLPE--DAVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPA-SGEARLRRRFAAHGVDPDRIIFSPVA 350 (468)
T ss_dssp TGGGT--S--SSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETST-THHHHHHHHHHHTTS-GGGEEEEE--
T ss_pred HHHcCCCC--CceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCH-HHHHHHHHHHHHcCCChhhEEEcCCC
Confidence 67889984 45777777775 4555566666666655 899998876543 23455666555554 378877766
Q ss_pred CHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEE-----c-CCceeEeccccccCCCCCccCH
Q 010448 365 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-----E-GFTGFQMGSFSVDCEAVDPVDV 438 (510)
Q Consensus 365 ~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~-----~-~~~G~l~~~~~~~~~~~~~~d~ 438 (510)
+.++.-..++.+|+++=|..+ +-+.+.+||+.+|+|||+-....+..-+. . |-.-+ -..|.
T Consensus 351 ~~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~El------------IA~s~ 417 (468)
T PF13844_consen 351 PREEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPEL------------IADSE 417 (468)
T ss_dssp -HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGG------------B-SSH
T ss_pred CHHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchh------------cCCCH
Confidence 666555688999999987433 55789999999999999887544332111 1 11222 24688
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHH---Hh--hccCChHHHHHHHHHHHHHH
Q 010448 439 AAVSTTVRRALATYGTQALAEMMKN---GM--AQDLSWKGPAKKWEETLLNL 485 (510)
Q Consensus 439 ~~la~~i~~ll~~~~~~~~~~~~~~---~~--~~~fs~~~~~~~~~~~y~~l 485 (510)
+++.+.-.++-+| ++.+.++.++ .+ ..-|+-...++++++.|+.+
T Consensus 418 ~eYv~~Av~La~D--~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 418 EEYVEIAVRLATD--PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC--HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 9999988888888 4443333322 22 35689999999999999875
No 127
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=98.24 E-value=2.7e-05 Score=76.03 Aligned_cols=155 Identities=17% Similarity=0.094 Sum_probs=98.9
Q ss_pred HHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCC-CCCCCCCCCccccccCCCcCChhhchHHHHHH
Q 010448 210 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 288 (510)
Q Consensus 210 ~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngv-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (510)
....+.+|++++.=++-.+.+.+ .|.+ .++|-|.. |.-.+.+ +++.
T Consensus 131 ~~i~~~~D~lLailPFE~~~y~k---~g~~---------~~yVGHpl~d~i~~~~---------------------~r~~ 177 (381)
T COG0763 131 VKIAKYVDHLLAILPFEPAFYDK---FGLP---------CTYVGHPLADEIPLLP---------------------DREA 177 (381)
T ss_pred HHHHHHhhHeeeecCCCHHHHHh---cCCC---------eEEeCChhhhhccccc---------------------cHHH
Confidence 44567899999999999999887 4433 34444432 2111221 1566
Q ss_pred HHHHhCCCCCCCCcEEEEecC-ccc-ccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccC
Q 010448 289 LQAEVGLPVDRNIPVIGFIGR-LEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 364 (510)
Q Consensus 289 ~~~~~g~~~~~~~~~i~~~Gr-l~~-~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~ 364 (510)
.|+++|++.+. +.+.+..|. -++ .+-...+++++.++++ ++.+|++--... ..+.++....+... .......
T Consensus 178 ar~~l~~~~~~-~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~--~~~~~~~~~~~~~~-~~~~~~~ 253 (381)
T COG0763 178 AREKLGIDADE-KTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNA--KYRRIIEEALKWEV-AGLSLIL 253 (381)
T ss_pred HHHHhCCCCCC-CeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcH--HHHHHHHHHhhccc-cCceEEe
Confidence 89999998654 345555554 343 4457788899988885 689998877554 22223333322211 0111222
Q ss_pred CHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEec
Q 010448 365 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 406 (510)
Q Consensus 365 ~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~ 406 (510)
.+......+.+||+.+..| |++.+|++.+|+|.|++.
T Consensus 254 ~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~Y 290 (381)
T COG0763 254 IDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVAY 290 (381)
T ss_pred cCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEEE
Confidence 3344456899999988765 999999999999999874
No 128
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.20 E-value=0.00024 Score=70.91 Aligned_cols=197 Identities=18% Similarity=0.150 Sum_probs=117.3
Q ss_pred HHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHH
Q 010448 209 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 288 (510)
Q Consensus 209 ~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (510)
.+..-+.+|.++|.=++-.+.+.+ .|+ ++.++-|..= +...+... ...
T Consensus 127 ~~~i~~~~D~ll~ifPFE~~~y~~---~g~---------~~~~VGHPl~-d~~~~~~~-------------------~~~ 174 (373)
T PF02684_consen 127 AKKIKKYVDHLLVIFPFEPEFYKK---HGV---------PVTYVGHPLL-DEVKPEPD-------------------RAE 174 (373)
T ss_pred HHHHHHHHhheeECCcccHHHHhc---cCC---------CeEEECCcch-hhhccCCC-------------------HHH
Confidence 355567799999999999999887 453 3555655421 11111111 344
Q ss_pred HHHHhCCCCCCCCcEEEEecC-cccc-cChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccC
Q 010448 289 LQAEVGLPVDRNIPVIGFIGR-LEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 364 (510)
Q Consensus 289 ~~~~~g~~~~~~~~~i~~~Gr-l~~~-Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~ 364 (510)
.++.+ ++.+ +..+.+..|. -.+. +.+..++++++++.+ +++++++..... ...+.+++.....+..+.... .
T Consensus 175 ~~~~~-l~~~-~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~-~~~~~i~~~~~~~~~~~~~~~-~ 250 (373)
T PF02684_consen 175 AREKL-LDPD-KPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPE-VHEELIEEILAEYPPDVSIVI-I 250 (373)
T ss_pred HHHhc-CCCC-CcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCH-HHHHHHHHHHHhhCCCCeEEE-c
Confidence 45555 5533 2335555554 3343 446888999999887 688988776543 334445555444333232222 1
Q ss_pred CHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEec-CCCccceEEc-----CC--------ceeEeccccccC
Q 010448 365 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEE-----GF--------TGFQMGSFSVDC 430 (510)
Q Consensus 365 ~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~-~gg~~e~v~~-----~~--------~G~l~~~~~~~~ 430 (510)
. ....+.|++||+.+..| |++.+|++.+|+|.|+.. .+.+.-.+.. .- +--++..+..
T Consensus 251 ~-~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ-- 322 (373)
T PF02684_consen 251 E-GESYDAMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQ-- 322 (373)
T ss_pred C-CchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhc--
Confidence 2 23345899999999776 999999999999998764 3322111110 00 0011111222
Q ss_pred CCCCccCHHHHHHHHHHHHHhh
Q 010448 431 EAVDPVDVAAVSTTVRRALATY 452 (510)
Q Consensus 431 ~~~~~~d~~~la~~i~~ll~~~ 452 (510)
+.-+++.+++++..+++|.
T Consensus 323 ---~~~~~~~i~~~~~~ll~~~ 341 (373)
T PF02684_consen 323 ---EDATPENIAAELLELLENP 341 (373)
T ss_pred ---ccCCHHHHHHHHHHHhcCH
Confidence 3458899999999999983
No 129
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=98.11 E-value=0.0017 Score=62.01 Aligned_cols=167 Identities=17% Similarity=0.117 Sum_probs=109.6
Q ss_pred CcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEE-ec--CChhHHHHHHHHHHHC-C-CceEEecc-CCHHHHHHHHH
Q 010448 301 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GT--GKKPMEKQLEQLEILY-P-EKARGVAK-FNIPLAHMIIA 374 (510)
Q Consensus 301 ~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~-G~--g~~~~~~~~~~l~~~~-~-~~v~~~~~-~~~~~~~~~~~ 374 (510)
+.+|+.--.-++..++..+++++.+....++++++- |- |++.|.+.+.+.+.++ + +++..... .+-++...+++
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~ 225 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLR 225 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHH
Confidence 344444444568888999999998887778887665 44 6778888888888764 3 35654443 36677778999
Q ss_pred hCcEEEeCCCC-CCccHHHHHHHHhCCCcEEec-CCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhh
Q 010448 375 GADFILIPSRF-EPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 452 (510)
Q Consensus 375 ~adv~v~ps~~-E~~g~~~~Eama~G~Pvv~s~-~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~ 452 (510)
.||+.++.-.. ++.|+.++ .+.+|+||+.+. ++-..++.+.+ .-++++ . +.-|...+.++=+
T Consensus 226 ~~Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~g-v~Vlf~---~-----d~L~~~~v~e~~r------ 289 (322)
T PRK02797 226 QCDLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQG-LPVLFT---G-----DDLDEDIVREAQR------ 289 (322)
T ss_pred hCCEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCC-CeEEec---C-----CcccHHHHHHHHH------
Confidence 99999998754 89998877 699999999986 45555555443 344331 0 2223333322211
Q ss_pred CHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHc
Q 010448 453 GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 488 (510)
Q Consensus 453 ~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~~ 488 (510)
++...-++.+. |+-++.++.|.+++....++
T Consensus 290 ---ql~~~dk~~I~--Ff~pn~~~~W~~~l~~~~g~ 320 (322)
T PRK02797 290 ---QLASVDKNIIA--FFSPNYLQGWRNALAIAAGE 320 (322)
T ss_pred ---HHHhhCcceee--ecCHhHHHHHHHHHHHhhCC
Confidence 11111122222 99999999999999876543
No 130
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.11 E-value=0.0048 Score=60.80 Aligned_cols=272 Identities=15% Similarity=0.090 Sum_probs=163.0
Q ss_pred CCCeEEEec-cchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCccccc-CccchhhcCCChhhhcccccccCCCCCCCC
Q 010448 126 GEDVVFVAN-DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 203 (510)
Q Consensus 126 ~pD~iih~h-~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (510)
+|| +|-.| |..+.+++.+.... .++|+..-.-++-..+.+ |+
T Consensus 92 kPD-~VlVhGDT~t~lA~alaa~~-------~~IpV~HvEAGlRt~~~~~PE---------------------------- 135 (383)
T COG0381 92 KPD-LVLVHGDTNTTLAGALAAFY-------LKIPVGHVEAGLRTGDLYFPE---------------------------- 135 (383)
T ss_pred CCC-EEEEeCCcchHHHHHHHHHH-------hCCceEEEecccccCCCCCcH----------------------------
Confidence 699 66666 56667665554443 478887665533221211 21
Q ss_pred CcchHHHHHH-HhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCC-CCCCCCCCCccccccCCCcCChhhc
Q 010448 204 RKINWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDA 281 (510)
Q Consensus 204 ~~~~~~~~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngv-d~~~~~~~~~~~~~~~~~~~~~~~~ 281 (510)
...+... .-||.-++.++..++.|.+ -|.+.+ +|.++-|-+ |.-.+...
T Consensus 136 ---E~NR~l~~~~S~~hfapte~ar~nLl~---EG~~~~------~IfvtGnt~iDal~~~~~----------------- 186 (383)
T COG0381 136 ---EINRRLTSHLSDLHFAPTEIARKNLLR---EGVPEK------RIFVTGNTVIDALLNTRD----------------- 186 (383)
T ss_pred ---HHHHHHHHHhhhhhcCChHHHHHHHHH---cCCCcc------ceEEeCChHHHHHHHHHh-----------------
Confidence 1122223 3588999999999999987 677755 688877653 21111100
Q ss_pred hHHHHHHHHHH-hCCCCCCCCcEEEEecCcc-cccChhhHHHHHHhhhh--CCcEEEEEecCChhHHHHHHHHHHHCCCc
Q 010448 282 KPLLKEALQAE-VGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEK 357 (510)
Q Consensus 282 ~~~~~~~~~~~-~g~~~~~~~~~i~~~Grl~-~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~~~~~~~~~~l~~~~~~~ 357 (510)
+.......... ++.+ ..+.+++..=|-+ ..+++..+++++.++.+ +++.++.--...+..++.. ........+
T Consensus 187 ~~~~~~~~~~~~~~~~--~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~-~~~L~~~~~ 263 (383)
T COG0381 187 RVLEDSKILAKGLDDK--DKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELV-LKRLKNVER 263 (383)
T ss_pred hhccchhhHHhhhccc--cCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHH-HHHhCCCCc
Confidence 00001111111 3322 2234455544443 34889999999988876 3666655544333333322 111122235
Q ss_pred eEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecC-CCccceEEcCCceeEeccccccCCCCCcc
Q 010448 358 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPV 436 (510)
Q Consensus 358 v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~-gg~~e~v~~~~~G~l~~~~~~~~~~~~~~ 436 (510)
+..+.++.-.....++..|-+.+-- +|...=||-..|+||++-+. ..-+|.++.| +-.++ ..
T Consensus 264 v~li~pl~~~~f~~L~~~a~~iltD-----SGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lv-----------g~ 326 (383)
T COG0381 264 VKLIDPLGYLDFHNLMKNAFLILTD-----SGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILV-----------GT 326 (383)
T ss_pred EEEeCCcchHHHHHHHHhceEEEec-----CCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEe-----------Cc
Confidence 8888888888888889998766632 47788899999999999874 4556666544 44554 46
Q ss_pred CHHHHHHHHHHHHHhhCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Q 010448 437 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 486 (510)
Q Consensus 437 d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~ 486 (510)
+.+.+.+++..++++ ++.+++|+.. ...|.--+..++..++++...
T Consensus 327 ~~~~i~~~~~~ll~~--~~~~~~m~~~--~npYgdg~as~rIv~~l~~~~ 372 (383)
T COG0381 327 DEENILDAATELLED--EEFYERMSNA--KNPYGDGNASERIVEILLNYF 372 (383)
T ss_pred cHHHHHHHHHHHhhC--hHHHHHHhcc--cCCCcCcchHHHHHHHHHHHh
Confidence 779999999999998 6666655443 345665666666666665543
No 131
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.03 E-value=0.0016 Score=68.41 Aligned_cols=126 Identities=11% Similarity=-0.005 Sum_probs=83.2
Q ss_pred CcEEEEecCccc-----ccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHH--
Q 010448 301 IPVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII-- 373 (510)
Q Consensus 301 ~~~i~~~Grl~~-----~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~-- 373 (510)
..+++..|.... .+-...+++|++.+ +.++++...+.. .. ...+.++....+.+..+ ++
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---~~~viw~~~~~~--~~------~~~p~Nv~i~~w~Pq~~---lL~h 362 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---PYNVLWKYDGEV--EA------INLPANVLTQKWFPQRA---VLKH 362 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC---CCeEEEEECCCc--Cc------ccCCCceEEecCCCHHH---HhcC
Confidence 367788888753 23356666776665 457766655431 11 12455677777777653 67
Q ss_pred HhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC----ccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHH
Q 010448 374 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 449 (510)
Q Consensus 374 ~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll 449 (510)
..++++| .-|-..++.||+.+|+|+|+-...+ ....+...+.|..++. ..-+.+++.++|.+++
T Consensus 363 p~v~~fI----tHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~--------~~~t~~~l~~ai~~vl 430 (507)
T PHA03392 363 KNVKAFV----TQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDT--------VTVSAAQLVLAIVDVI 430 (507)
T ss_pred CCCCEEE----ecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEecc--------CCcCHHHHHHHHHHHh
Confidence 4588888 4456778999999999999986433 3334445677877621 2237799999999999
Q ss_pred Hhh
Q 010448 450 ATY 452 (510)
Q Consensus 450 ~~~ 452 (510)
+++
T Consensus 431 ~~~ 433 (507)
T PHA03392 431 ENP 433 (507)
T ss_pred CCH
Confidence 873
No 132
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.95 E-value=0.00027 Score=72.05 Aligned_cols=180 Identities=13% Similarity=0.052 Sum_probs=115.0
Q ss_pred HHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh--CCcEEEEEecCC-hhHHHHHHHHHHHCCC---ceEEecc
Q 010448 290 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYPE---KARGVAK 363 (510)
Q Consensus 290 ~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~--~~~~l~i~G~g~-~~~~~~~~~l~~~~~~---~v~~~~~ 363 (510)
|.++|+|+ +.+++++.++ ..|-...+++...++.+ |+..|++.|.|+ ++....+++++++.+. ++++...
T Consensus 421 R~~lglp~--~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 421 RAQLGLPE--DAVVFCCFNN--YFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred hhhcCCCC--CeEEEEecCC--cccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC
Confidence 67789984 4456666655 44544455555544444 789999998765 5778889999998763 7888888
Q ss_pred CCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCcc-----ceEEc-CCceeEeccccccCCCCCccC
Q 010448 364 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-----DTVEE-GFTGFQMGSFSVDCEAVDPVD 437 (510)
Q Consensus 364 ~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~-----e~v~~-~~~G~l~~~~~~~~~~~~~~d 437 (510)
.+.+...+.|.-+|+++=+.-+ +-..+..||+.+|+|||+--..-+. .++.. |..-++ ..+
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~v------------A~s 563 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPELV------------ADS 563 (620)
T ss_pred CCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchhh------------cCC
Confidence 8888888899999999966544 5577899999999999975321111 11111 111111 234
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHH---HHHhh--ccCChHHHHHHHHHHHHHHHHc
Q 010448 438 VAAVSTTVRRALATYGTQALAEMM---KNGMA--QDLSWKGPAKKWEETLLNLEVA 488 (510)
Q Consensus 438 ~~~la~~i~~ll~~~~~~~~~~~~---~~~~~--~~fs~~~~~~~~~~~y~~l~~~ 488 (510)
.++..+.-..+=.+ .....+.. +..+. .-|+.+..++++..+|.+..++
T Consensus 564 ~~dYV~~av~~g~d--ral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~~ 617 (620)
T COG3914 564 RADYVEKAVAFGSD--RALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWSE 617 (620)
T ss_pred HHHHHHHHHHhccc--HHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHHh
Confidence 44444443333333 21121111 11122 3689999999999999998765
No 133
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.81 E-value=0.00091 Score=70.00 Aligned_cols=154 Identities=14% Similarity=0.119 Sum_probs=97.3
Q ss_pred HHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCC-CCCCCCCCCccccccCCCcCChhhchHHHHH
Q 010448 209 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 287 (510)
Q Consensus 209 ~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngv-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (510)
.+..-+.+|.++|.=+...+.+.+ .|+ ++..+=|.. |. .....+ +.
T Consensus 355 ikki~k~vD~ll~IfPFE~~~y~~---~gv---------~v~yVGHPL~d~--i~~~~~-------------------~~ 401 (608)
T PRK01021 355 KTILEKYLDLLLLILPFEQNLFKD---SPL---------RTVYLGHPLVET--ISSFSP-------------------NL 401 (608)
T ss_pred HHHHHHHhhhheecCccCHHHHHh---cCC---------CeEEECCcHHhh--cccCCC-------------------HH
Confidence 355567899999999999999886 454 355555543 32 111111 45
Q ss_pred HHHHHhCCCCCCCCcEEEEecC-ccc-ccChhhHHHHHH--hhhhCCcEEEEEecCChhHHHHHHHHHHHCCC-ceEEec
Q 010448 288 ALQAEVGLPVDRNIPVIGFIGR-LEE-QKGSDILAAAIP--HFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGVA 362 (510)
Q Consensus 288 ~~~~~~g~~~~~~~~~i~~~Gr-l~~-~Kg~~~li~a~~--~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~-~v~~~~ 362 (510)
+.++++|++.+ ...+.+..|. -.+ .+.+..++++++ ++. ++.++++... ++...+.+++.....+. .+....
T Consensus 402 ~~r~~lgl~~~-~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~-~~l~fvvp~a-~~~~~~~i~~~~~~~~~~~~~ii~ 478 (608)
T PRK01021 402 SWKEQLHLPSD-KPIVAAFPGSRRGDILRNLTIQVQAFLASSLA-STHQLLVSSA-NPKYDHLILEVLQQEGCLHSHIVP 478 (608)
T ss_pred HHHHHcCCCCC-CCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc-cCeEEEEecC-chhhHHHHHHHHhhcCCCCeEEec
Confidence 66888898533 2345556665 334 445788888887 554 3688877543 32334555555543221 122221
Q ss_pred cCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEec
Q 010448 363 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 406 (510)
Q Consensus 363 ~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~ 406 (510)
+....+++++||+.+..| |++.+|++.+|+|.|+..
T Consensus 479 ---~~~~~~~m~aaD~aLaaS-----GTaTLEaAL~g~PmVV~Y 514 (608)
T PRK01021 479 ---SQFRYELMRECDCALAKC-----GTIVLETALNQTPTIVTC 514 (608)
T ss_pred ---CcchHHHHHhcCeeeecC-----CHHHHHHHHhCCCEEEEE
Confidence 112247999999999876 999999999999999754
No 134
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=97.75 E-value=0.00051 Score=60.53 Aligned_cols=41 Identities=12% Similarity=0.253 Sum_probs=31.5
Q ss_pred HHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCC
Q 010448 210 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW 261 (510)
Q Consensus 210 ~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~ 261 (510)
...+..||..++.|.+.++.+-.. + ..||.||+-|||++.+
T Consensus 130 l~~l~~~D~~isPT~wQ~~~fP~~----------~-r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 130 LLALEQADAGISPTRWQRSQFPAE----------F-RSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHHhCCcCcCCCHHHHHhCCHH----------H-HcCcEEeecccchhhc
Confidence 446678999999999988865431 1 2399999999998765
No 135
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=97.73 E-value=0.0052 Score=59.53 Aligned_cols=165 Identities=15% Similarity=0.073 Sum_probs=106.9
Q ss_pred CcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEE-ecC--ChhHHHHHHHHHHHC-C-CceEEe-ccCCHHHHHHHHH
Q 010448 301 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTG--KKPMEKQLEQLEILY-P-EKARGV-AKFNIPLAHMIIA 374 (510)
Q Consensus 301 ~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~-G~g--~~~~~~~~~~l~~~~-~-~~v~~~-~~~~~~~~~~~~~ 374 (510)
+.+|+.--.-++..++..+++++.+....++++++- |-| ++.|.+++.+.+.++ + .++... ...+-++.-++++
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~ 264 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLS 264 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHH
Confidence 344444444567888888888888765567876664 434 467888888888874 4 256543 3457788888999
Q ss_pred hCcEEEeCCCC-CCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhC
Q 010448 375 GADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 453 (510)
Q Consensus 375 ~adv~v~ps~~-E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~ 453 (510)
.||++++.... .+.|+.++ .+.+|+||+.+....+...+.+.+--+++ . -+.-|.+.+.++=+++..-
T Consensus 265 ~cDl~if~~~RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~~~ipVlf---~-----~d~L~~~~v~ea~rql~~~-- 333 (360)
T PF07429_consen 265 RCDLGIFNHNRQQGIGNICL-LLQLGKKVFLSRDNPFWQDLKEQGIPVLF---Y-----GDELDEALVREAQRQLANV-- 333 (360)
T ss_pred hCCEEEEeechhhhHhHHHH-HHHcCCeEEEecCChHHHHHHhCCCeEEe---c-----cccCCHHHHHHHHHHHhhC--
Confidence 99999999865 89998877 69999999999866655555544334444 1 1344555555554433332
Q ss_pred HHHHHHHHHHHhhccCChHHHHHHHHHHHHHH
Q 010448 454 TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 485 (510)
Q Consensus 454 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l 485 (510)
-++ .-.|.-....+.|.+.+...
T Consensus 334 -------dk~--~iaFf~pny~~~w~~~l~~~ 356 (360)
T PF07429_consen 334 -------DKQ--QIAFFAPNYLQGWRQALRLA 356 (360)
T ss_pred -------ccc--ceeeeCCchHHHHHHHHHHH
Confidence 111 12255566667777766543
No 136
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.52 E-value=0.0078 Score=57.15 Aligned_cols=180 Identities=18% Similarity=0.200 Sum_probs=102.1
Q ss_pred HHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCC----CCCCCCCCccccccCCCcCChhhchHHHHH
Q 010448 212 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD----VQEWNPLTDKYIGVKYDASTVMDAKPLLKE 287 (510)
Q Consensus 212 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (510)
.+..||.+++++......+.. .|-.+.+ .+-+||+- ...|.| ..
T Consensus 123 ~~Pla~~ii~P~~~~~~~~~~---~G~~p~~-------i~~~~giae~~~v~~f~p----------------------d~ 170 (346)
T COG1817 123 TLPLADVIITPEAIDEEELLD---FGADPNK-------ISGYNGIAELANVYGFVP----------------------DP 170 (346)
T ss_pred chhhhhheecccccchHHHHH---hCCCccc-------eecccceeEEeecccCCC----------------------CH
Confidence 355689999999888877776 5655432 22234432 223554 34
Q ss_pred HHHHHhCCCCCCCCcEEEEecC-----cccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEec
Q 010448 288 ALQAEVGLPVDRNIPVIGFIGR-----LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 362 (510)
Q Consensus 288 ~~~~~~g~~~~~~~~~i~~~Gr-----l~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~ 362 (510)
++.+++|+..+ +..+++=.-. ....++++.+.++++.+.+.. .+++-. +....+.+ +.+.+.+. .
T Consensus 171 evlkeLgl~~~-~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g--iV~ipr-~~~~~eif----e~~~n~i~--p 240 (346)
T COG1817 171 EVLKELGLEEG-ETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG--IVLIPR-EKEQAEIF----EGYRNIII--P 240 (346)
T ss_pred HHHHHcCCCCC-CceEEEeeccccceeeccccchhhHHHHHHHHHhCc--EEEecC-chhHHHHH----hhhccccC--C
Confidence 66788999754 3344442211 245677888889998886644 333332 21122222 23221111 1
Q ss_pred cCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCC---CccceEEcCCceeEeccccccCCCCCccCHH
Q 010448 363 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 439 (510)
Q Consensus 363 ~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~g---g~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~ 439 (510)
.-..+.+ .++--|++++ -+.|.-.-||.+.|+|.|...-| +..+... ..|.++ ...|+.
T Consensus 241 k~~vD~l-~Llyya~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~----------~s~~~~ 302 (346)
T COG1817 241 KKAVDTL-SLLYYATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLY----------HSTDEI 302 (346)
T ss_pred cccccHH-HHHhhhheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCcee----------ecCCHH
Confidence 1111112 3677778777 23566789999999999999844 2333333 367777 566777
Q ss_pred HHHHHHHHHHHh
Q 010448 440 AVSTTVRRALAT 451 (510)
Q Consensus 440 ~la~~i~~ll~~ 451 (510)
+..+...+++.+
T Consensus 303 ~~~~~a~~~l~~ 314 (346)
T COG1817 303 AIVEYAVRNLKY 314 (346)
T ss_pred HHHHHHHHHhhc
Confidence 666666655554
No 137
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.51 E-value=0.012 Score=57.52 Aligned_cols=211 Identities=13% Similarity=0.081 Sum_probs=133.4
Q ss_pred hccceeecCHHH-HHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHHHHHHh
Q 010448 215 ESDMVLTVSPHY-AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 293 (510)
Q Consensus 215 ~ad~vi~vS~~~-~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (510)
..|.|++.++.. ++.+.+. .|. .+...+++++|.+.|.|.....
T Consensus 138 ~fd~v~~~g~~l~~~~yyq~--~~~--------~~~~~~~~a~d~~~~~~i~~da------------------------- 182 (373)
T COG4641 138 IFDNVLSFGGGLVANKYYQE--GGA--------RNCYYLPWAVDDSLFHPIPPDA------------------------- 182 (373)
T ss_pred hhhhhhhccchHHHHHHHHh--hcc--------cceeccCccCCchhcccCCccc-------------------------
Confidence 356677777776 4444421 111 1678899999999988765210
Q ss_pred CCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh-C------CcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCH
Q 010448 294 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-E------NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 366 (510)
Q Consensus 294 g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~-~------~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~ 366 (510)
.-.--+.++|...+. ..+.++++.- + +-++...|...+ ....... ...++...+.++.
T Consensus 183 -----~~~~dL~~ign~~pD-----r~e~~ke~~~~ps~kl~v~rr~~~~g~~y~--~~~~~~~---~~~~~~yIg~~~~ 247 (373)
T COG4641 183 -----SYDVDLNLIGNPYPD-----RVEEIKEFFVEPSFKLMVDRRFYVLGPRYP--DDIWGRT---WEPNVQYIGYYNP 247 (373)
T ss_pred -----cceeeeEEecCCCcc-----HHHHHHHHhhccchhhhccceeeecCCccc--hhhhccc---ccchhhhhhccCc
Confidence 001247778876554 3444444332 1 346666776521 0111110 0012333344433
Q ss_pred -HHHHHHHHhCcEEEeCCCC---CC---ccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHH
Q 010448 367 -PLAHMIIAGADFILIPSRF---EP---CGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 439 (510)
Q Consensus 367 -~~~~~~~~~adv~v~ps~~---E~---~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~ 439 (510)
...+..++..|+.+.-++. ++ +.+.+.|+++||.|.+++...++...+.+|..-++ ..|..
T Consensus 248 ~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv------------~~d~k 315 (373)
T COG4641 248 KDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIV------------YQDSK 315 (373)
T ss_pred cchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEE------------ecCHH
Confidence 5555678888888766543 33 37889999999999999999998888888775554 48999
Q ss_pred HHHHHHHHHHHhhC-HHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHH
Q 010448 440 AVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 487 (510)
Q Consensus 440 ~la~~i~~ll~~~~-~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 487 (510)
++.+++..++..++ +..+.+.+.+.+...|+.+.-+..+.+....+..
T Consensus 316 dl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI~~ 364 (373)
T COG4641 316 DLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIASINI 364 (373)
T ss_pred HHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 99999999999843 2445555555567779999988888887776543
No 138
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=97.47 E-value=0.0015 Score=66.70 Aligned_cols=158 Identities=14% Similarity=0.119 Sum_probs=87.7
Q ss_pred CcEEEEecCcccccChhhHHHHHHhhhhCCcEEE-EEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEE
Q 010448 301 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 379 (510)
Q Consensus 301 ~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~-i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~ 379 (510)
..+++..|.+...+. +.+-.+++.+.+.+.+++ .+|.+.+ ...+. ..+.++......+.. .++..||++
T Consensus 226 ~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~g~~~~--~~~~~----~~~~~v~~~~~~p~~---~ll~~~~~~ 295 (392)
T TIGR01426 226 PVVLISLGTVFNNQP-SFYRTCVEAFRDLDWHVVLSVGRGVD--PADLG----ELPPNVEVRQWVPQL---EILKKADAF 295 (392)
T ss_pred CEEEEecCccCCCCH-HHHHHHHHHHhcCCCeEEEEECCCCC--hhHhc----cCCCCeEEeCCCCHH---HHHhhCCEE
Confidence 356778888644332 222223333333355544 4555431 11122 234456666655543 579999999
Q ss_pred EeCCCCCCccHHHHHHHHhCCCcEEecCCC----ccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCH-
Q 010448 380 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT- 454 (510)
Q Consensus 380 v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~- 454 (510)
|..+ -..+++||+++|+|+|+....+ +.+.+.+.+.|..+. -..-+.++++++|.+++++++.
T Consensus 296 I~hg----G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~--------~~~~~~~~l~~ai~~~l~~~~~~ 363 (392)
T TIGR01426 296 ITHG----GMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP--------PEEVTAEKLREAVLAVLSDPRYA 363 (392)
T ss_pred EECC----CchHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec--------cccCCHHHHHHHHHHHhcCHHHH
Confidence 9654 2357899999999999976443 223344556776651 0233689999999999987321
Q ss_pred HHHHHHHHHHhhccCChHHHHHHHHHH
Q 010448 455 QALAEMMKNGMAQDLSWKGPAKKWEET 481 (510)
Q Consensus 455 ~~~~~~~~~~~~~~fs~~~~~~~~~~~ 481 (510)
+...++.+. +...-..+..++...++
T Consensus 364 ~~~~~l~~~-~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 364 ERLRKMRAE-IREAGGARRAADEIEGF 389 (392)
T ss_pred HHHHHHHHH-HHHcCCHHHHHHHHHHh
Confidence 122222222 23333455555554443
No 139
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=97.37 E-value=0.02 Score=62.05 Aligned_cols=263 Identities=19% Similarity=0.260 Sum_probs=161.1
Q ss_pred CCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccch-hhcCCChhhhcccccccCCCCCCCCCc
Q 010448 127 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 127 pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
-| +|..|+.+..++|-+++... .++++-+-.| ..+|.... ..+.....+
T Consensus 141 ~d-~vwihdyhlmllp~~lr~~~------~~~~ig~flh-----spfpssEi~r~lp~r~eI------------------ 190 (732)
T KOG1050|consen 141 GD-IVWIHDYHLMLLPQMLRERF------NSAKIGFFLH-----SPFPSSEIYRCLPVRKEI------------------ 190 (732)
T ss_pred CC-cEEEEcchhhccchhhhccc------ccceEEEecc-----CCCChHHHHHhcccHHHH------------------
Confidence 46 99999999999998888754 4677778888 44443221 222222222
Q ss_pred chHHHHHHHhccceeecCHHHHHHHhcCCC--CCCchh-----hhh----hcCCceEecCCCCCCCCCCCCccccccCCC
Q 010448 206 INWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD-----NII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 274 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~-----~~~----~~~ki~vIpngvd~~~~~~~~~~~~~~~~~ 274 (510)
-.++.++|.+-..+..++..+..... .|.... ..+ +...+..+|-|+|...|......
T Consensus 191 ----l~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~------- 259 (732)
T KOG1050|consen 191 ----LRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLEL------- 259 (732)
T ss_pred ----HHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccc-------
Confidence 22344555555555544444332110 000000 000 01246677888887766443210
Q ss_pred cCChhhchHHHHHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh------CCcEEEEEecCC----h---
Q 010448 275 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----K--- 341 (510)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~------~~~~l~i~G~g~----~--- 341 (510)
........+++..+ .++.+++-+-|++..||+..=+.++.++.+ +.+.++.+..+. +
T Consensus 260 -----~~~~~~~~ei~~~~-----~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~ 329 (732)
T KOG1050|consen 260 -----PYVGSKGMEIKEPF-----KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVE 329 (732)
T ss_pred -----hhHHHHHHHHhhhc-----cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHH
Confidence 00111123444443 256799999999999999888888888876 256666665432 1
Q ss_pred hHHHHHHHHH----HHCCC----ceE-EeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhC----CCcEEecCC
Q 010448 342 PMEKQLEQLE----ILYPE----KAR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG----TVPIVASTG 408 (510)
Q Consensus 342 ~~~~~~~~l~----~~~~~----~v~-~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G----~Pvv~s~~g 408 (510)
+++..+.... .+++. .|. ....++...+-+++..+|+.+..+..+|..++.+|+.+|. .+.|.+..-
T Consensus 330 ~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~ 409 (732)
T KOG1050|consen 330 ELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFI 409 (732)
T ss_pred HHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeec
Confidence 2233333222 22221 122 3335577777789999999999999999999999999884 567777776
Q ss_pred CccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhh
Q 010448 409 GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 452 (510)
Q Consensus 409 g~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~ 452 (510)
|-.+..+++. .++ .|.|.++++.+|..+++.+
T Consensus 410 G~~~tl~d~a--ivv----------npw~~~~~~~~i~~al~~s 441 (732)
T KOG1050|consen 410 GDDTTLEDAA--IVV----------NPWDGDEFAILISKALTMS 441 (732)
T ss_pred cccccccccC--EEE----------CCcchHHHHHHHHHHhhcC
Confidence 7666665543 333 8999999999999999984
No 140
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=96.94 E-value=0.0089 Score=60.49 Aligned_cols=199 Identities=13% Similarity=0.139 Sum_probs=96.4
Q ss_pred HHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHHH
Q 010448 209 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 288 (510)
Q Consensus 209 ~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (510)
........|.+++.|+...+.+.+. +|.+.+ .++..|.. .++. +..........
T Consensus 128 ~~~~~~~~d~~~~~s~~~~~~~~~~--f~~~~~--------~i~~~G~P--R~D~--------------l~~~~~~~~~~ 181 (369)
T PF04464_consen 128 YKRNYRNYDYFIVSSEFEKEIFKKA--FGYPED--------KILVTGYP--RNDY--------------LFNKSKENRNR 181 (369)
T ss_dssp HHHHHTT-SEEEESSHHHHHHHHHH--TT--GG--------GEEES--G--GGHH--------------HHHSTT-HHHH
T ss_pred hhhhccCCcEEEECCHHHHHHHHHH--hccCcc--------eEEEeCCC--eEhH--------------HhccCHHHHHH
Confidence 4556778999999999999988863 455432 34555642 1110 11111122567
Q ss_pred HHHHhCCCCCCCCcEEEEecCcccccCh--------hhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 010448 289 LQAEVGLPVDRNIPVIGFIGRLEEQKGS--------DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 360 (510)
Q Consensus 289 ~~~~~g~~~~~~~~~i~~~Grl~~~Kg~--------~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~ 360 (510)
+++.++++. ++.+|+|+-.+...... ..-++.+..+.+.+..+++-.-.. ........ .....++..
T Consensus 182 i~~~~~~~~--~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~Hp~--~~~~~~~~-~~~~~~i~~ 256 (369)
T PF04464_consen 182 IKKKLGIDK--DKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPHPN--MKKKFKDF-KEDNSNIIF 256 (369)
T ss_dssp HHHHTT--S--S-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--SHH--HHTT-----TT-TTTEEE
T ss_pred HHHHhccCC--CCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeCch--hhhchhhh-hccCCcEEE
Confidence 788888863 45799999766443322 122333334444677776655322 22222222 222334554
Q ss_pred eccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEe--cCCCccceEEcCCceeEeccccccCCCCCccCH
Q 010448 361 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA--STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV 438 (510)
Q Consensus 361 ~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s--~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~ 438 (510)
.... +.+.+++..||++|- -++.+++|++.+++|||-. |.....+ ..|+.++ +...+-.....+.
T Consensus 257 ~~~~--~~~~~ll~~aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~-----~rg~~~~-~~~~~pg~~~~~~ 323 (369)
T PF04464_consen 257 VSDN--EDIYDLLAAADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEK-----ERGFYFD-YEEDLPGPIVYNF 323 (369)
T ss_dssp -TT---S-HHHHHHT-SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTT-----TSSBSS--TTTSSSS-EESSH
T ss_pred CCCC--CCHHHHHHhcCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhh-----ccCCCCc-hHhhCCCceeCCH
Confidence 3322 356679999999992 1466899999999999954 3321110 1222221 0000000023789
Q ss_pred HHHHHHHHHHHHh
Q 010448 439 AAVSTTVRRALAT 451 (510)
Q Consensus 439 ~~la~~i~~ll~~ 451 (510)
++|.++|..++++
T Consensus 324 ~eL~~~i~~~~~~ 336 (369)
T PF04464_consen 324 EELIEAIENIIEN 336 (369)
T ss_dssp HHHHHHHTTHHHH
T ss_pred HHHHHHHHhhhhC
Confidence 9999999999887
No 141
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=96.70 E-value=0.025 Score=57.84 Aligned_cols=126 Identities=17% Similarity=0.140 Sum_probs=83.1
Q ss_pred CcEEEEecCcccccChhhHHHHH-HhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEE
Q 010448 301 IPVIGFIGRLEEQKGSDILAAAI-PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 379 (510)
Q Consensus 301 ~~~i~~~Grl~~~Kg~~~li~a~-~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~ 379 (510)
.++.+..|..... ..+++.+ +.+.+-+.++++...+.+ . .....+.++.....++.. +++..||++
T Consensus 238 ~~vyvslGt~~~~---~~l~~~~~~a~~~l~~~vi~~~~~~~-~------~~~~~p~n~~v~~~~p~~---~~l~~ad~v 304 (406)
T COG1819 238 PIVYVSLGTVGNA---VELLAIVLEALADLDVRVIVSLGGAR-D------TLVNVPDNVIVADYVPQL---ELLPRADAV 304 (406)
T ss_pred CeEEEEcCCcccH---HHHHHHHHHHHhcCCcEEEEeccccc-c------ccccCCCceEEecCCCHH---HHhhhcCEE
Confidence 3456666666544 3333333 333334888888774421 0 112344456666666655 379999999
Q ss_pred EeCCCCCCccHHHHHHHHhCCCcEEecCC----CccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHh
Q 010448 380 LIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 451 (510)
Q Consensus 380 v~ps~~E~~g~~~~Eama~G~Pvv~s~~g----g~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~ 451 (510)
|... --.++.||+.+|+|+|+-..+ ...+.+++-++|... -.+..+.+.++++|.+++++
T Consensus 305 I~hG----G~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l--------~~~~l~~~~l~~av~~vL~~ 368 (406)
T COG1819 305 IHHG----GAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL--------PFEELTEERLRAAVNEVLAD 368 (406)
T ss_pred EecC----CcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec--------CcccCCHHHHHHHHHHHhcC
Confidence 9554 456789999999999988654 244556667888776 12468999999999999997
No 142
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=96.60 E-value=0.0021 Score=64.94 Aligned_cols=81 Identities=12% Similarity=0.212 Sum_probs=47.1
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| +||.|...+++++.++..+. ++|.++|-|.++. ..++.+.+.+-.+..++ .+ ...
T Consensus 401 ~Pd-lI~GnYsDgnlvA~LLs~~l-------gv~~~~iaHsLek-~Ky~~s~~~w~e~e~~Y----hf---------s~q 458 (550)
T PF00862_consen 401 KPD-LIIGNYSDGNLVASLLSRKL-------GVTQCFIAHSLEK-TKYEDSDLYWKEIEEKY----HF---------SCQ 458 (550)
T ss_dssp --S-EEEEEHHHHHHHHHHHHHHH-------T-EEEEE-SS-HH-HHHHTTTTTSHHHHHHH-----H---------HHH
T ss_pred CCc-EEEeccCcchHHHHHHHhhc-------CCceehhhhcccc-ccccccCCCHHHHHhhc----cc---------hhh
Confidence 499 99999999999998888774 9999999998754 22222111111111110 00 012
Q ss_pred chHHHHHHHhccceeecCHHHHH
Q 010448 206 INWMKAGILESDMVLTVSPHYAQ 228 (510)
Q Consensus 206 ~~~~~~~~~~ad~vi~vS~~~~~ 228 (510)
+.....+++.||.|||.+..-..
T Consensus 459 ftAd~iamn~adfIItST~QEI~ 481 (550)
T PF00862_consen 459 FTADLIAMNAADFIITSTYQEIA 481 (550)
T ss_dssp HHHHHHHHHHSSEEEESSHHHHH
T ss_pred hhHHHHHhhcCCEEEEcchHhhc
Confidence 22335578899999998876554
No 143
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.51 E-value=0.15 Score=47.34 Aligned_cols=105 Identities=10% Similarity=0.016 Sum_probs=57.4
Q ss_pred CCcEEEEecCcccccCh-----hhHHHHHHhhhh-CCcEEEEEecC--ChhHHHHHHHHHHHCCCceEEeccC--CHHHH
Q 010448 300 NIPVIGFIGRLEEQKGS-----DILAAAIPHFIK-ENVQIIVLGTG--KKPMEKQLEQLEILYPEKARGVAKF--NIPLA 369 (510)
Q Consensus 300 ~~~~i~~~Grl~~~Kg~-----~~li~a~~~l~~-~~~~l~i~G~g--~~~~~~~~~~l~~~~~~~v~~~~~~--~~~~~ 369 (510)
..++-+++|.-.+.-.. .++..++.+..+ ....|++--+- ++..+..++......+ ..+...- ...-.
T Consensus 161 rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~--~i~w~~~d~g~NPY 238 (329)
T COG3660 161 RQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPDTVKSILKNNLNSSP--GIVWNNEDTGYNPY 238 (329)
T ss_pred CceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcHHHHHHHHhccccCc--eeEeCCCCCCCCch
Confidence 45788999986554332 233333333332 46677766653 3333444433221222 2221111 11122
Q ss_pred HHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC
Q 010448 370 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 409 (510)
Q Consensus 370 ~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg 409 (510)
..+|++||.++.+... =.-+.||.+.|+||.+..-.+
T Consensus 239 ~~~La~Adyii~TaDS---inM~sEAasTgkPv~~~~~~~ 275 (329)
T COG3660 239 IDMLAAADYIISTADS---INMCSEAASTGKPVFILEPPN 275 (329)
T ss_pred HHHHhhcceEEEecch---hhhhHHHhccCCCeEEEecCC
Confidence 3689999999987542 334679999999998775443
No 144
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=96.39 E-value=0.12 Score=51.42 Aligned_cols=91 Identities=20% Similarity=0.119 Sum_probs=59.7
Q ss_pred cEEEEecCcc-c-ccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEE
Q 010448 302 PVIGFIGRLE-E-QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 379 (510)
Q Consensus 302 ~~i~~~Grl~-~-~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~ 379 (510)
.+.++.|.-. + .+-+..+++++.++.+...++++.|... . +.+++...+.. .+.+. . ...++|+.||+.
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~--~-~~i~~~~~~~~-~~~~~---~--~~~~~m~~aDla 239 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK--G-KDLKEIYGDIS-EFEIS---Y--DTHKALLEAEFA 239 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc--H-HHHHHHHhcCC-CcEEe---c--cHHHHHHhhhHH
Confidence 4555666532 2 3446667789888876557788887654 2 34444433322 23222 1 234689999999
Q ss_pred EeCCCCCCccHHHHHHHHhCCCcEEec
Q 010448 380 LIPSRFEPCGLIQLHAMRYGTVPIVAS 406 (510)
Q Consensus 380 v~ps~~E~~g~~~~Eama~G~Pvv~s~ 406 (510)
+..| |.+.+|++.+|+|.|...
T Consensus 240 l~~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 240 FICS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred HhcC-----cHHHHHHHHhCCCEEEEE
Confidence 9766 888889999999999865
No 145
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.31 E-value=0.91 Score=46.67 Aligned_cols=131 Identities=16% Similarity=0.217 Sum_probs=72.6
Q ss_pred hhHHHHHHhhhhCCcEEEEEec--C----ChhHHHHHHHHHHHCCC--ceE-EeccCCHHHHHHHHHhCcEEEeCCCCCC
Q 010448 317 DILAAAIPHFIKENVQIIVLGT--G----KKPMEKQLEQLEILYPE--KAR-GVAKFNIPLAHMIIAGADFILIPSRFEP 387 (510)
Q Consensus 317 ~~li~a~~~l~~~~~~l~i~G~--g----~~~~~~~~~~l~~~~~~--~v~-~~~~~~~~~~~~~~~~adv~v~ps~~E~ 387 (510)
..+.+++..+.+.+.+++++-. + .++.....+++....+. ++. ....++..++..+++.||++|-.-..
T Consensus 260 ~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~RlH-- 337 (426)
T PRK10017 260 KAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRLH-- 337 (426)
T ss_pred HHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcccccceeEecCCCChHHHHHHHhhCCEEEEecch--
Confidence 4455666666655655555542 1 11122333444444322 222 22335556666899999999943321
Q ss_pred ccHHHHHHHHhCCCcEEecC----CCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhCHHHHHHHHHH
Q 010448 388 CGLIQLHAMRYGTVPIVAST----GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN 463 (510)
Q Consensus 388 ~g~~~~Eama~G~Pvv~s~~----gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~ 463 (510)
+++-|+++|+|+|+-.- -|+-+.+.- ..+++ .+..-+.+++.+.+.+++++ .+.+++..++
T Consensus 338 ---a~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~--~~~~~--------~~~~l~~~~Li~~v~~~~~~--r~~~~~~l~~ 402 (426)
T PRK10017 338 ---SAIISMNFGTPAIAINYEHKSAGIMQQLGL--PEMAI--------DIRHLLDGSLQAMVADTLGQ--LPALNARLAE 402 (426)
T ss_pred ---HHHHHHHcCCCEEEeeehHHHHHHHHHcCC--ccEEe--------chhhCCHHHHHHHHHHHHhC--HHHHHHHHHH
Confidence 46668999999998753 222222221 12322 11444678899999999998 5444443333
Q ss_pred H
Q 010448 464 G 464 (510)
Q Consensus 464 ~ 464 (510)
+
T Consensus 403 ~ 403 (426)
T PRK10017 403 A 403 (426)
T ss_pred H
Confidence 3
No 146
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=96.15 E-value=0.23 Score=48.76 Aligned_cols=105 Identities=16% Similarity=0.051 Sum_probs=67.6
Q ss_pred CcEEEEecCccccc--Chh---hHHHHHHhhhh-CCcEEEEEecC--ChhHHHHHHHHHHHCCCceEEeccCCHHHHHHH
Q 010448 301 IPVIGFIGRLEEQK--GSD---ILAAAIPHFIK-ENVQIIVLGTG--KKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 372 (510)
Q Consensus 301 ~~~i~~~Grl~~~K--g~~---~li~a~~~l~~-~~~~l~i~G~g--~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~ 372 (510)
..+.+.+|.-+..- +.+ .+++.+..+.+ ....+.|..+. +++..+.++++....+ .+.++..-...-+..+
T Consensus 147 p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~-~~~~~~~~~~nPy~~~ 225 (311)
T PF06258_consen 147 PRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNP-GVYIWDGTGENPYLGF 225 (311)
T ss_pred CeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCC-ceEEecCCCCCcHHHH
Confidence 35677778644322 223 45555555554 46788888874 3556666777665433 3433333333334469
Q ss_pred HHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC
Q 010448 373 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 409 (510)
Q Consensus 373 ~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg 409 (510)
|+.||.++++.. +-.-+.||.+.|+||.+....+
T Consensus 226 La~ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 226 LAAADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred HHhCCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 999999998865 3445789999999999998776
No 147
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=95.98 E-value=0.048 Score=41.63 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=25.4
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCC
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNI 167 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~ 167 (510)
+.| |||.|...+.+..-.+..... .|.+.|+|-|++
T Consensus 50 ~I~-IVHgH~a~S~l~hE~i~hA~~-----mGlktVfTDHSL 85 (90)
T PF08288_consen 50 RID-IVHGHQAFSTLCHEAILHART-----MGLKTVFTDHSL 85 (90)
T ss_pred Cee-EEEeehhhhHHHHHHHHHHHh-----CCCcEEeecccc
Confidence 478 999998766665544333222 599999999964
No 148
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=95.67 E-value=0.11 Score=51.53 Aligned_cols=120 Identities=13% Similarity=0.114 Sum_probs=72.1
Q ss_pred CcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEE
Q 010448 301 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 380 (510)
Q Consensus 301 ~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v 380 (510)
..+++|.|. .+...+++++.++ +++.+++ |..+. ... .++.++.... +..+++..+|+.||++|
T Consensus 189 ~~iLv~~g~----~~~~~l~~~l~~~--~~~~~i~-~~~~~-~~~-------~~~~~v~~~~-~~~~~~~~~l~~ad~vI 252 (321)
T TIGR00661 189 DYILVYIGF----EYRYKILELLGKI--ANVKFVC-YSYEV-AKN-------SYNENVEIRR-ITTDNFKELIKNAELVI 252 (321)
T ss_pred CcEEEECCc----CCHHHHHHHHHhC--CCeEEEE-eCCCC-Ccc-------ccCCCEEEEE-CChHHHHHHHHhCCEEE
Confidence 345566544 3445667777655 3555543 43221 111 1234566554 44355667999999999
Q ss_pred eCCCCCCccHHHHHHHHhCCCcEEecCCCccc------eEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHh
Q 010448 381 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 451 (510)
Q Consensus 381 ~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e------~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~ 451 (510)
.-+ -..++.||+++|+|++.....+..| .+.+.+.|..+ +..+. ++.+++.+.+++
T Consensus 253 ~~~----G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l----------~~~~~-~~~~~~~~~~~~ 314 (321)
T TIGR00661 253 THG----GFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL----------EYKEL-RLLEAILDIRNM 314 (321)
T ss_pred ECC----ChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc----------ChhhH-HHHHHHHhcccc
Confidence 765 2347999999999999988766444 34455677765 55565 444555444444
No 149
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=95.05 E-value=0.00077 Score=59.87 Aligned_cols=81 Identities=11% Similarity=0.153 Sum_probs=49.1
Q ss_pred ceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCc--------cceEEcCCceeEeccccc
Q 010448 357 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSV 428 (510)
Q Consensus 357 ~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~--------~e~v~~~~~G~l~~~~~~ 428 (510)
++......+ .+..+|+.||++|.- +-+.++.|++++|+|.|.-...+. ...+.+.+.|..+.
T Consensus 56 ~v~~~~~~~--~m~~~m~~aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~---- 125 (167)
T PF04101_consen 56 NVKVFGFVD--NMAELMAAADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLD---- 125 (167)
T ss_dssp CCEEECSSS--SHHHHHHHHSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSE----
T ss_pred cEEEEechh--hHHHHHHHcCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccC----
Confidence 455544433 355799999999932 346899999999999987765552 22233334444331
Q ss_pred cCCCCCccCHHHHHHHHHHHHHh
Q 010448 429 DCEAVDPVDVAAVSTTVRRALAT 451 (510)
Q Consensus 429 ~~~~~~~~d~~~la~~i~~ll~~ 451 (510)
-...+++.|.++|..++++
T Consensus 126 ----~~~~~~~~L~~~i~~l~~~ 144 (167)
T PF04101_consen 126 ----ESELNPEELAEAIEELLSD 144 (167)
T ss_dssp ----CCC-SCCCHHHHHHCHCCC
T ss_pred ----cccCCHHHHHHHHHHHHcC
Confidence 1233478899999999887
No 150
>PLN02448 UDP-glycosyltransferase family protein
Probab=94.66 E-value=0.72 Score=48.12 Aligned_cols=137 Identities=10% Similarity=0.004 Sum_probs=76.4
Q ss_pred CcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEE
Q 010448 301 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 380 (510)
Q Consensus 301 ~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v 380 (510)
..+++..|..... ..+.+-+.+.-|...+..|+++..++. ..+.+. .++++....+.+... +++..++..
T Consensus 275 ~vvyvsfGs~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~---~~~~~~---~~~~~~v~~w~pQ~~---iL~h~~v~~ 344 (459)
T PLN02448 275 SVLYVSLGSFLSV-SSAQMDEIAAGLRDSGVRFLWVARGEA---SRLKEI---CGDMGLVVPWCDQLK---VLCHSSVGG 344 (459)
T ss_pred ceEEEeecccccC-CHHHHHHHHHHHHhCCCCEEEEEcCch---hhHhHh---ccCCEEEeccCCHHH---HhccCccce
Confidence 4677777876431 223333444444344778887665431 112221 122344445556553 688887744
Q ss_pred eCCCCCCccHHHHHHHHhCCCcEEecCCC----ccceEEcC-CceeEeccccccCCCCCccCHHHHHHHHHHHHHhh
Q 010448 381 IPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 452 (510)
Q Consensus 381 ~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e~v~~~-~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~ 452 (510)
+-+. +-..+++||+.+|+|+|+-...+ ....+.+. +.|+-+..-.. .-...+.+++++++++++.++
T Consensus 345 fvtH--gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~---~~~~~~~~~l~~av~~vl~~~ 416 (459)
T PLN02448 345 FWTH--CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVG---EETLVGREEIAELVKRFMDLE 416 (459)
T ss_pred EEec--CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccc---cCCcCcHHHHHHHHHHHhcCC
Confidence 4343 44568999999999999876543 22333332 45655410000 001247899999999999763
No 151
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=94.53 E-value=0.19 Score=44.62 Aligned_cols=25 Identities=20% Similarity=0.340 Sum_probs=22.2
Q ss_pred HhccceeecCHHHHHHHhcCCCCCCchh
Q 010448 214 LESDMVLTVSPHYAQELVSGEDKGVELD 241 (510)
Q Consensus 214 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~ 241 (510)
..+|..++.|+.+++.+.+ +|++++
T Consensus 136 ~~~D~y~Vase~~~~~l~~---~Gi~~~ 160 (169)
T PF06925_consen 136 PGVDRYFVASEEVKEELIE---RGIPPE 160 (169)
T ss_pred CCCCEEEECCHHHHHHHHH---cCCChh
Confidence 3589999999999999998 798876
No 152
>PLN02670 transferase, transferring glycosyl groups
Probab=94.52 E-value=0.73 Score=48.01 Aligned_cols=119 Identities=11% Similarity=-0.025 Sum_probs=68.9
Q ss_pred eEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCC----CccceEEcCCceeEeccccccCCCC
Q 010448 358 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAV 433 (510)
Q Consensus 358 v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~g----g~~e~v~~~~~G~l~~~~~~~~~~~ 433 (510)
+....+.++.+ +++...+..+-+. +--++++||+++|+|+|+-... .....+.+-+.|+.+.....+
T Consensus 341 ~vv~~W~PQ~~---IL~H~~v~~FvtH--cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~---- 411 (472)
T PLN02670 341 MIHVGWVPQVK---ILSHESVGGFLTH--CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD---- 411 (472)
T ss_pred eEEeCcCCHHH---HhcCcccceeeec--CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC----
Confidence 44445666553 6877777554454 3456899999999999997633 233344445678766200000
Q ss_pred CccCHHHHHHHHHHHHHhhCHHHHHHHHHHH---hhccCChHHHHHHHHHHHHHH
Q 010448 434 DPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 485 (510)
Q Consensus 434 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~~y~~l 485 (510)
..-+.+++.++|++++.+..-+.+++..++- +..+=+.+.+++.+++.+.+.
T Consensus 412 ~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 412 GSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred CcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 0136899999999999763212333332221 234444455555555555443
No 153
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=94.38 E-value=0.82 Score=45.46 Aligned_cols=116 Identities=18% Similarity=0.190 Sum_probs=72.2
Q ss_pred HHHHHHhCCCCCCCCcEEEEecC-cccccC--hhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceE-Eec
Q 010448 287 EALQAEVGLPVDRNIPVIGFIGR-LEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR-GVA 362 (510)
Q Consensus 287 ~~~~~~~g~~~~~~~~~i~~~Gr-l~~~Kg--~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~-~~~ 362 (510)
..+...+++..+ ...+++..|. ..+.|. .+...+.++.+.+.+.++++.|...+ .+..+++....+..+. ..+
T Consensus 162 ~~~~~~~~~~~~-~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e--~~~~~~i~~~~~~~~~~l~g 238 (334)
T TIGR02195 162 AAALAKFGLDTE-RPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKD--HPAGNEIEALLPGELRNLAG 238 (334)
T ss_pred HHHHHHcCCCCC-CCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhh--HHHHHHHHHhCCcccccCCC
Confidence 344556665421 2356667666 346675 44777888777666788999987652 3344555444443332 334
Q ss_pred cCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCc
Q 010448 363 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL 410 (510)
Q Consensus 363 ~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~ 410 (510)
..+=.+...+++.||++|..- .| .+-=|.|.|+|+|+--.+..
T Consensus 239 ~~sL~el~ali~~a~l~I~~D----SG-p~HlAaA~~~P~i~lfG~t~ 281 (334)
T TIGR02195 239 ETSLDEAVDLIALAKAVVTND----SG-LMHVAAALNRPLVALYGSTS 281 (334)
T ss_pred CCCHHHHHHHHHhCCEEEeeC----CH-HHHHHHHcCCCEEEEECCCC
Confidence 445566778999999999543 12 33347899999998654433
No 154
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=94.13 E-value=0.14 Score=40.79 Aligned_cols=79 Identities=15% Similarity=0.236 Sum_probs=55.1
Q ss_pred EEEEecCChhHHHHHHHHHHHCCCceEEe---ccCCHHH--HHHHHHhCcEEEeCCCC---CCccHHHHHHHHhCCCcEE
Q 010448 333 IIVLGTGKKPMEKQLEQLEILYPEKARGV---AKFNIPL--AHMIIAGADFILIPSRF---EPCGLIQLHAMRYGTVPIV 404 (510)
Q Consensus 333 l~i~G~g~~~~~~~~~~l~~~~~~~v~~~---~~~~~~~--~~~~~~~adv~v~ps~~---E~~g~~~~Eama~G~Pvv~ 404 (510)
++|+|. .+.....+++...+++..+..+ .+..... ++..+..+|++|++..+ ..+-.+--+|-..|+|++.
T Consensus 2 vliVGG-~~~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGG-REDRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcC-CcccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 567774 1225677788888888766666 4444443 66789999999999876 3345556677888999999
Q ss_pred ecCCCccc
Q 010448 405 ASTGGLVD 412 (510)
Q Consensus 405 s~~gg~~e 412 (510)
++..|...
T Consensus 81 ~~~~~~~~ 88 (97)
T PF10087_consen 81 SRSRGVSS 88 (97)
T ss_pred ECCCCHHH
Confidence 98666543
No 155
>PLN02562 UDP-glycosyltransferase
Probab=93.89 E-value=0.88 Score=47.25 Aligned_cols=130 Identities=8% Similarity=-0.021 Sum_probs=76.4
Q ss_pred CcEEEEecCcc---cccChhhHHHHHHhhhhCCcEEEE-EecCCh-hHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHh
Q 010448 301 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIV-LGTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 375 (510)
Q Consensus 301 ~~~i~~~Grl~---~~Kg~~~li~a~~~l~~~~~~l~i-~G~g~~-~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 375 (510)
..+++..|.+. +.+-+..++.+++.. ..+|++ +..+.. .+.+.+.+. .++++....+.+... +++.
T Consensus 274 svvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~fiW~~~~~~~~~l~~~~~~~---~~~~~~v~~w~PQ~~---iL~h 344 (448)
T PLN02562 274 SVIYISFGSWVSPIGESNVRTLALALEAS---GRPFIWVLNPVWREGLPPGYVER---VSKQGKVVSWAPQLE---VLKH 344 (448)
T ss_pred ceEEEEecccccCCCHHHHHHHHHHHHHC---CCCEEEEEcCCchhhCCHHHHHH---hccCEEEEecCCHHH---HhCC
Confidence 35777888764 333455555555554 345554 333211 111112221 223454455666553 6888
Q ss_pred CcEEEeCCCCCCccHHHHHHHHhCCCcEEecCC----CccceEEc-CCceeEeccccccCCCCCccCHHHHHHHHHHHHH
Q 010448 376 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 450 (510)
Q Consensus 376 adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~g----g~~e~v~~-~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~ 450 (510)
.++..+-+. +--.+.+||+.+|+|+|+.... .....+.+ -+.|+-+ ...+.++++++|++++.
T Consensus 345 ~~v~~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~----------~~~~~~~l~~~v~~~l~ 412 (448)
T PLN02562 345 QAVGCYLTH--CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRI----------SGFGQKEVEEGLRKVME 412 (448)
T ss_pred CccceEEec--CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEe----------CCCCHHHHHHHHHHHhC
Confidence 776554444 3456899999999999987543 33334433 2556654 44578999999999997
Q ss_pred h
Q 010448 451 T 451 (510)
Q Consensus 451 ~ 451 (510)
+
T Consensus 413 ~ 413 (448)
T PLN02562 413 D 413 (448)
T ss_pred C
Confidence 6
No 156
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=92.59 E-value=2.7 Score=42.13 Aligned_cols=106 Identities=12% Similarity=-0.025 Sum_probs=67.7
Q ss_pred CCcEEEEecCcccccC--hhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCC-Cce-EEeccCCHHHHHHHHHh
Q 010448 300 NIPVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKA-RGVAKFNIPLAHMIIAG 375 (510)
Q Consensus 300 ~~~~i~~~Grl~~~Kg--~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~-~~v-~~~~~~~~~~~~~~~~~ 375 (510)
+..+++..|.-.+.|. .+.+.+.++.|.+.+.+++++|...+...+..+++..... ..+ ...+..+=.+...+++.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~ 262 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDH 262 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHh
Confidence 3467788887667776 4477777777766678898887644222333444444322 123 33444566667789999
Q ss_pred CcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCc
Q 010448 376 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL 410 (510)
Q Consensus 376 adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~ 410 (510)
||++|..- .|. +-=|.|.|+|+|+--.+..
T Consensus 263 a~l~v~nD----SGp-~HlAaA~g~P~v~lfGpt~ 292 (352)
T PRK10422 263 AQLFIGVD----SAP-AHIAAAVNTPLICLFGATD 292 (352)
T ss_pred CCEEEecC----CHH-HHHHHHcCCCEEEEECCCC
Confidence 99999543 233 3347899999998764443
No 157
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=92.33 E-value=1.3 Score=41.73 Aligned_cols=104 Identities=14% Similarity=0.086 Sum_probs=63.2
Q ss_pred CCcEEEEecCcccccC--hhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCC-ceEEeccCCHHHHHHHHHhC
Q 010448 300 NIPVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGVAKFNIPLAHMIIAGA 376 (510)
Q Consensus 300 ~~~~i~~~Grl~~~Kg--~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~-~v~~~~~~~~~~~~~~~~~a 376 (510)
...+++..|.-.+.|. .+...+.+..+.+....++++|.+.+...+..+++....+. .+...+..+-.+...+++.|
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a 184 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRA 184 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTS
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcC
Confidence 3467777777777776 44578888888765678899997764334455555544332 34455555667777899999
Q ss_pred cEEEeCCCCCCccHHHHHHHHhCCCcEEecCC
Q 010448 377 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 408 (510)
Q Consensus 377 dv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~g 408 (510)
|++|.+- .|. +-=|.|.|+|+|+--..
T Consensus 185 ~~~I~~D----tg~-~HlA~a~~~p~v~lfg~ 211 (247)
T PF01075_consen 185 DLVIGND----TGP-MHLAAALGTPTVALFGP 211 (247)
T ss_dssp SEEEEES----SHH-HHHHHHTT--EEEEESS
T ss_pred CEEEecC----ChH-HHHHHHHhCCEEEEecC
Confidence 9999654 233 34479999999987533
No 158
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=92.29 E-value=3.1 Score=41.53 Aligned_cols=104 Identities=12% Similarity=0.004 Sum_probs=65.8
Q ss_pred CcEEEEecCcccccC--hhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCC-ceE-EeccCCHHHHHHHHHhC
Q 010448 301 IPVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KAR-GVAKFNIPLAHMIIAGA 376 (510)
Q Consensus 301 ~~~i~~~Grl~~~Kg--~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~-~v~-~~~~~~~~~~~~~~~~a 376 (510)
..+++..|.-.+.|. .+...+.++.+.+.+.+++++|...+...+..+++....+. ++. ..+..+-.++..+++.|
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a 261 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHA 261 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhC
Confidence 456777776556665 55677777777666788999986542222334444433322 233 34445666777899999
Q ss_pred cEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC
Q 010448 377 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 409 (510)
Q Consensus 377 dv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg 409 (510)
|++|..- .| .+-=|.|.|+|+|+--.+.
T Consensus 262 ~l~Vs~D----SG-p~HlAaA~g~p~v~Lfgpt 289 (344)
T TIGR02201 262 RLFIGVD----SV-PMHMAAALGTPLVALFGPS 289 (344)
T ss_pred CEEEecC----CH-HHHHHHHcCCCEEEEECCC
Confidence 9999553 23 3334789999999875443
No 159
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=92.25 E-value=2.6 Score=43.79 Aligned_cols=135 Identities=15% Similarity=0.057 Sum_probs=75.7
Q ss_pred CCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEE-ecC----Chh---HHHHHHHHHHHCCCceEEeccCCHHHHHH
Q 010448 300 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTG----KKP---MEKQLEQLEILYPEKARGVAKFNIPLAHM 371 (510)
Q Consensus 300 ~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~-G~g----~~~---~~~~~~~l~~~~~~~v~~~~~~~~~~~~~ 371 (510)
+..+++..|.+.. -..+.+.+.+.-|......|+++ ..+ .+. +.+.+.+ +.+++.....+.+..+
T Consensus 264 ~sVvyvsfGS~~~-~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~e---r~~~~g~v~~w~PQ~~--- 336 (451)
T PLN02410 264 NSVIFVSLGSLAL-MEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSK---IISGRGYIVKWAPQKE--- 336 (451)
T ss_pred CcEEEEEcccccc-CCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHH---hccCCeEEEccCCHHH---
Confidence 3467778887752 23345555554444433344443 322 111 1112222 2223444445666654
Q ss_pred HHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCC----CccceEEcC-CceeEeccccccCCCCCccCHHHHHHHHH
Q 010448 372 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVR 446 (510)
Q Consensus 372 ~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~g----g~~e~v~~~-~~G~l~~~~~~~~~~~~~~d~~~la~~i~ 446 (510)
+++..++..+-+. +--++++||+++|+|+|+-... .....+.+. +.|+-+. ..-+.++++++|+
T Consensus 337 iL~h~~v~~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~---------~~~~~~~v~~av~ 405 (451)
T PLN02410 337 VLSHPAVGGFWSH--CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE---------GDLDRGAVERAVK 405 (451)
T ss_pred HhCCCccCeeeec--CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC---------CcccHHHHHHHHH
Confidence 6777666443343 3445899999999999987543 233333333 5676551 2347899999999
Q ss_pred HHHHhh
Q 010448 447 RALATY 452 (510)
Q Consensus 447 ~ll~~~ 452 (510)
+++.++
T Consensus 406 ~lm~~~ 411 (451)
T PLN02410 406 RLMVEE 411 (451)
T ss_pred HHHcCC
Confidence 999764
No 160
>PLN03004 UDP-glycosyltransferase
Probab=92.22 E-value=1.6 Score=45.30 Aligned_cols=85 Identities=8% Similarity=-0.151 Sum_probs=56.3
Q ss_pred ceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecC----CCccceEEc-CCceeEeccccccCC
Q 010448 357 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST----GGLVDTVEE-GFTGFQMGSFSVDCE 431 (510)
Q Consensus 357 ~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~----gg~~e~v~~-~~~G~l~~~~~~~~~ 431 (510)
++....+.++.+ +++.+++..+-+. +--++++||+++|+|+|+... ......+.+ -+.|+.++...
T Consensus 335 g~~v~~W~PQ~~---iL~H~~v~~FvTH--~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~---- 405 (451)
T PLN03004 335 GMVVKSWAPQVP---VLNHKAVGGFVTH--CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESE---- 405 (451)
T ss_pred cEEEEeeCCHHH---HhCCCccceEecc--CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCc----
Confidence 455556677664 7999998555554 345689999999999998764 333334433 35777652000
Q ss_pred CCCccCHHHHHHHHHHHHHh
Q 010448 432 AVDPVDVAAVSTTVRRALAT 451 (510)
Q Consensus 432 ~~~~~d~~~la~~i~~ll~~ 451 (510)
-..-+.+++++++++++.+
T Consensus 406 -~~~~~~e~l~~av~~vm~~ 424 (451)
T PLN03004 406 -TGFVSSTEVEKRVQEIIGE 424 (451)
T ss_pred -CCccCHHHHHHHHHHHhcC
Confidence 0023789999999999975
No 161
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=92.20 E-value=1.4 Score=42.51 Aligned_cols=104 Identities=15% Similarity=0.162 Sum_probs=67.2
Q ss_pred cEEEEecCcccccC--hhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHC-CCce-EEeccCCHHHHHHHHHhCc
Q 010448 302 PVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY-PEKA-RGVAKFNIPLAHMIIAGAD 377 (510)
Q Consensus 302 ~~i~~~Grl~~~Kg--~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~-~~~v-~~~~~~~~~~~~~~~~~ad 377 (510)
.+++..|.-.+.|. .+.+.++++.+.+.+.+++++|..+ ..+..+++.... ..++ ...+..+-.+...+++.||
T Consensus 123 ~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~--e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~ 200 (279)
T cd03789 123 VVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA--ERELAEEIAAALGGPRVVNLAGKTSLRELAALLARAD 200 (279)
T ss_pred EEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh--hHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCC
Confidence 46666666566665 5688888888876688999998655 233444444433 1222 2333445566678999999
Q ss_pred EEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccc
Q 010448 378 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 412 (510)
Q Consensus 378 v~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e 412 (510)
++|.+- .|..=+ |.+.|+|+|+--.+..++
T Consensus 201 l~I~~D----sg~~Hl-A~a~~~p~i~l~g~~~~~ 230 (279)
T cd03789 201 LVVTND----SGPMHL-AAALGTPTVALFGPTDPA 230 (279)
T ss_pred EEEeeC----CHHHHH-HHHcCCCEEEEECCCCcc
Confidence 999664 244444 579999999876544443
No 162
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=92.05 E-value=0.41 Score=50.60 Aligned_cols=127 Identities=16% Similarity=0.091 Sum_probs=73.0
Q ss_pred CCcEEEEecCccc---ccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhC
Q 010448 300 NIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 376 (510)
Q Consensus 300 ~~~~i~~~Grl~~---~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~a 376 (510)
+..+++..|.+.. .+-...++++++++ ++ ++++.-.+.. ...+ +.++....+.|+. ++++..
T Consensus 276 ~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~--~~-~~iW~~~~~~-----~~~l----~~n~~~~~W~PQ~---~lL~hp 340 (500)
T PF00201_consen 276 KGVVYVSFGSIVSSMPEEKLKEIAEAFENL--PQ-RFIWKYEGEP-----PENL----PKNVLIVKWLPQN---DLLAHP 340 (500)
T ss_dssp TEEEEEE-TSSSTT-HHHHHHHHHHHHHCS--TT-EEEEEETCSH-----GCHH----HTTEEEESS--HH---HHHTST
T ss_pred CCEEEEecCcccchhHHHHHHHHHHHHhhC--CC-cccccccccc-----cccc----cceEEEeccccch---hhhhcc
Confidence 3467788888753 11244566666655 33 7777665531 1111 1346666666755 467766
Q ss_pred cEEEeCCCCCCccHHHHHHHHhCCCcEEecCC----CccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHh
Q 010448 377 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 451 (510)
Q Consensus 377 dv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~g----g~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~ 451 (510)
.+-++-+. |--.+++||+.+|+|+|+-..- .....+.+.+.|..++. ..-+.+++.++|.++++|
T Consensus 341 ~v~~fitH--gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~--------~~~~~~~l~~ai~~vl~~ 409 (500)
T PF00201_consen 341 RVKLFITH--GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDK--------NDLTEEELRAAIREVLEN 409 (500)
T ss_dssp TEEEEEES----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGG--------GC-SHHHHHHHHHHHHHS
T ss_pred cceeeeec--cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEe--------cCCcHHHHHHHHHHHHhh
Confidence 55444443 4566899999999999998643 23344555667776621 223679999999999998
No 163
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=92.04 E-value=6.6 Score=38.60 Aligned_cols=103 Identities=13% Similarity=0.122 Sum_probs=65.9
Q ss_pred CCcEEEEecCcccccCh--hhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCc
Q 010448 300 NIPVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 377 (510)
Q Consensus 300 ~~~~i~~~Grl~~~Kg~--~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ad 377 (510)
.+.+++..|.=.+.|.. +.+.+.++.+.+.+.+++++|.++. ..+..+++....+. ....+..+=.+...+++.||
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~-e~~~~~~i~~~~~~-~~l~g~~sL~el~ali~~a~ 256 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA-EKQRAERIAEALPG-AVVLPKMSLAEVAALLAGAD 256 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHhhCCC-CeecCCCCHHHHHHHHHcCC
Confidence 34577777765567764 5777777777656788888864442 23334555544443 23345556566668999999
Q ss_pred EEEeCCCCCCccHHHHHHHHhCCCcEEecCCC
Q 010448 378 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 409 (510)
Q Consensus 378 v~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg 409 (510)
++|..-. | .+-=|.|.|+|+|+--.+.
T Consensus 257 l~I~~DS----g-p~HlAaa~g~P~i~lfg~t 283 (319)
T TIGR02193 257 AVVGVDT----G-LTHLAAALDKPTVTLYGAT 283 (319)
T ss_pred EEEeCCC----h-HHHHHHHcCCCEEEEECCC
Confidence 9995541 2 3334789999999875433
No 164
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=91.92 E-value=0.21 Score=47.90 Aligned_cols=87 Identities=13% Similarity=0.078 Sum_probs=46.1
Q ss_pred CCCeEEEeccc-hhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCC
Q 010448 126 GEDVVFVANDW-HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 204 (510)
Q Consensus 126 ~pD~iih~h~~-~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (510)
+.| |+|+... ..++++++++.. .|+|+++|-|+.....+. .....-.. . ....+.+..|.+
T Consensus 172 ~ad-vyHsvstGyAgl~g~~~k~~-------~g~P~lLTEHGIY~RER~----~ei~~a~w-~-----~~~~~~r~~wi~ 233 (268)
T PF11997_consen 172 KAD-VYHSVSTGYAGLLGALAKYR-------YGRPFLLTEHGIYTRERE----IEILQADW-I-----WESPYVRDLWIR 233 (268)
T ss_pred CCC-EEecCCccHHHHHHHHHHHH-------hCCCEEEecCCccHHHHH----HHHHhccc-c-----cchHHHHHHHHH
Confidence 468 9999743 235555666654 599999999955432221 11110000 0 000001111111
Q ss_pred cchHH-HHHHHhccceeecCHHHHHHH
Q 010448 205 KINWM-KAGILESDMVLTVSPHYAQEL 230 (510)
Q Consensus 205 ~~~~~-~~~~~~ad~vi~vS~~~~~~l 230 (510)
....+ +.+++.||.|+++++...+.=
T Consensus 234 ~f~~l~~~~Y~~Ad~I~~l~~~n~~~q 260 (268)
T PF11997_consen 234 FFESLSRLAYRAADRITPLYEYNREWQ 260 (268)
T ss_pred HHHHHHHHHHHhhCeecccchhhHHHH
Confidence 22222 667899999999999655443
No 165
>PLN02210 UDP-glucosyl transferase
Probab=91.28 E-value=3.4 Score=43.01 Aligned_cols=139 Identities=9% Similarity=-0.001 Sum_probs=76.2
Q ss_pred CcEEEEecCcccccChhhHHHHHHhhhhCCcEEEE-EecCC-hhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcE
Q 010448 301 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV-LGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 378 (510)
Q Consensus 301 ~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i-~G~g~-~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv 378 (510)
..+++..|..... ..+.+-+.+.-|...+.+|++ ++... ......+.+... +++.....+.+.. .+++.+.+
T Consensus 270 svvyvsfGS~~~~-~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~--~~~g~v~~w~PQ~---~iL~h~~v 343 (456)
T PLN02210 270 SVVYISFGSMLES-LENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVK--EGQGVVLEWSPQE---KILSHMAI 343 (456)
T ss_pred ceEEEEecccccC-CHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhcc--CCCeEEEecCCHH---HHhcCcCc
Confidence 4677788886532 334444555555444556555 34321 111122222221 1223333455655 37888885
Q ss_pred EEeCCCCCCccHHHHHHHHhCCCcEEecCCC----ccceEEc-CCceeEeccccccCCCCCccCHHHHHHHHHHHHHh
Q 010448 379 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 451 (510)
Q Consensus 379 ~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e~v~~-~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~ 451 (510)
..+-+. +--++++||+.+|+|+|+-...+ ....+.+ -+.|..+.....+ ..-+.+++++++++++.+
T Consensus 344 g~FitH--~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~----~~~~~~~l~~av~~~m~~ 415 (456)
T PLN02210 344 SCFVTH--CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVD----GELKVEEVERCIEAVTEG 415 (456)
T ss_pred CeEEee--CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccC----CcCCHHHHHHHHHHHhcC
Confidence 544443 33458999999999999876433 2333443 4677665100000 124779999999999976
No 166
>PLN00164 glucosyltransferase; Provisional
Probab=91.00 E-value=4.9 Score=42.19 Aligned_cols=86 Identities=12% Similarity=-0.162 Sum_probs=52.3
Q ss_pred eEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCC----CccceE-EcCCceeEeccccccCCC
Q 010448 358 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTV-EEGFTGFQMGSFSVDCEA 432 (510)
Q Consensus 358 v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~g----g~~e~v-~~~~~G~l~~~~~~~~~~ 432 (510)
+....+.+... +++..++..+-+. +--++++||+.+|+|+|+-..- .....+ +.-+.|+.+..... -
T Consensus 341 ~~v~~w~PQ~~---iL~h~~vg~fvtH--~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~---~ 412 (480)
T PLN00164 341 LVWPTWAPQKE---ILAHAAVGGFVTH--CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRK---R 412 (480)
T ss_pred eEEeecCCHHH---HhcCcccCeEEee--cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccc---c
Confidence 44445566553 6888886554444 3345899999999999987532 233233 33356765410000 0
Q ss_pred CCccCHHHHHHHHHHHHHh
Q 010448 433 VDPVDVAAVSTTVRRALAT 451 (510)
Q Consensus 433 ~~~~d~~~la~~i~~ll~~ 451 (510)
-..-+.++++++|.+++.+
T Consensus 413 ~~~~~~e~l~~av~~vm~~ 431 (480)
T PLN00164 413 DNFVEAAELERAVRSLMGG 431 (480)
T ss_pred CCcCcHHHHHHHHHHHhcC
Confidence 0013679999999999976
No 167
>PLN02208 glycosyltransferase family protein
Probab=90.76 E-value=6.2 Score=40.87 Aligned_cols=140 Identities=8% Similarity=-0.025 Sum_probs=76.3
Q ss_pred CCcEEEEecCcccccChhhHHHHHHhhhhCCcE-EEEEec--C--C--hhHHHHHHHHHHHCCCceEEeccCCHHHHHHH
Q 010448 300 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQ-IIVLGT--G--K--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 372 (510)
Q Consensus 300 ~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~-l~i~G~--g--~--~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~ 372 (510)
+..+++..|.+.. -..+.+.+.+..+...+.. ++++-. + . +.+.+.+.+.... .++....+.++.+ +
T Consensus 251 ~sVvyvSfGS~~~-l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~--~g~~v~~W~PQ~~---i 324 (442)
T PLN02208 251 KSVVFCSLGSQII-LEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKG--RGVVWGGWVQQPL---I 324 (442)
T ss_pred CcEEEEecccccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhc--CCcEeeccCCHHH---H
Confidence 3467777888752 2345566655554222222 233322 1 1 1111222222222 2354445666654 6
Q ss_pred HHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC----ccceEEc-CCceeEeccccccCCCCCccCHHHHHHHHHH
Q 010448 373 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 447 (510)
Q Consensus 373 ~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e~v~~-~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ 447 (510)
++...+..+-+. +--++++||+++|+|+|+-..-+ ....+.+ -+.|..++.-. + ..-+.++++++|.+
T Consensus 325 L~H~~v~~FvtH--cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~-~----~~~~~~~l~~ai~~ 397 (442)
T PLN02208 325 LDHPSIGCFVNH--CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK-T----GWFSKESLSNAIKS 397 (442)
T ss_pred hcCCccCeEEcc--CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc-C----CcCcHHHHHHHHHH
Confidence 888887665554 34568999999999999876432 2233222 35666551000 0 01377999999999
Q ss_pred HHHhh
Q 010448 448 ALATY 452 (510)
Q Consensus 448 ll~~~ 452 (510)
++++.
T Consensus 398 ~m~~~ 402 (442)
T PLN02208 398 VMDKD 402 (442)
T ss_pred HhcCC
Confidence 99763
No 168
>PLN02173 UDP-glucosyl transferase family protein
Probab=90.34 E-value=2.3 Score=44.12 Aligned_cols=139 Identities=5% Similarity=-0.004 Sum_probs=75.7
Q ss_pred CCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCC-hhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcE
Q 010448 300 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 378 (510)
Q Consensus 300 ~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~-~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv 378 (510)
+..+.+..|.+.. -..+.+.+++.-|...++ ++++-.+. ..+.+.+.+.. .+.++....+.++. ++++...+
T Consensus 264 ~svvyvsfGS~~~-~~~~~~~ela~gLs~~~f-lWvvr~~~~~~lp~~~~~~~--~~~~~~i~~W~PQ~---~iL~H~~v 336 (449)
T PLN02173 264 GSVVYIAFGSMAK-LSSEQMEEIASAISNFSY-LWVVRASEESKLPPGFLETV--DKDKSLVLKWSPQL---QVLSNKAI 336 (449)
T ss_pred CceEEEEeccccc-CCHHHHHHHHHHhcCCCE-EEEEeccchhcccchHHHhh--cCCceEEeCCCCHH---HHhCCCcc
Confidence 3467777887653 233455555555532232 22232111 11111121111 12345555666755 37888886
Q ss_pred EEeCCCCCCccHHHHHHHHhCCCcEEecCCC----ccceEEcC-CceeEeccccccCCCCCccCHHHHHHHHHHHHHh
Q 010448 379 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 451 (510)
Q Consensus 379 ~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e~v~~~-~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~ 451 (510)
..+-+. +-.++++||+++|+|+|+-...+ ....+.+. +.|+-+..-..+ ..-+.+++++++++++.+
T Consensus 337 ~~FvtH--cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~----~~~~~e~v~~av~~vm~~ 408 (449)
T PLN02173 337 GCFMTH--CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKES----GIAKREEIEFSIKEVMEG 408 (449)
T ss_pred ceEEec--CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccC----CcccHHHHHHHHHHHhcC
Confidence 665554 44578999999999999876432 33344332 456654100000 012789999999999976
No 169
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=89.80 E-value=5.4 Score=41.77 Aligned_cols=137 Identities=9% Similarity=-0.097 Sum_probs=70.1
Q ss_pred CcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCCh-------hHHHHHHHHHHHCCCceEEeccCCHHHHHHHH
Q 010448 301 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK-------PMEKQLEQLEILYPEKARGVAKFNIPLAHMII 373 (510)
Q Consensus 301 ~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~-------~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 373 (510)
..+++..|.+..... +.+-+.+.-|...+..|+++-..+. .+...+.+... +..+....+.+.. .++
T Consensus 284 svVyvsfGS~~~~~~-~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~--~~g~~v~~w~PQ~---~vL 357 (477)
T PLN02863 284 KVVYVCFGSQVVLTK-EQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRVA--GRGLVIRGWAPQV---AIL 357 (477)
T ss_pred ceEEEEeeceecCCH-HHHHHHHHHHHhCCCcEEEEECCCcccccchhhCCHHHHHHhc--cCCEEecCCCCHH---HHh
Confidence 457777787653221 3344444444443556555543210 01111222211 1235545566654 367
Q ss_pred HhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCC----CccceEE-cCCceeEeccccccCCCCCccCHHHHHHHHHHH
Q 010448 374 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 448 (510)
Q Consensus 374 ~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~g----g~~e~v~-~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~l 448 (510)
+...+.++-+. +-.++++||+++|+|+|+-... .....+. .-+.|.-+.. .. ....+.+++++++.++
T Consensus 358 ~h~~v~~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~--~~---~~~~~~~~v~~~v~~~ 430 (477)
T PLN02863 358 SHRAVGAFLTH--CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE--GA---DTVPDSDELARVFMES 430 (477)
T ss_pred cCCCcCeEEec--CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc--CC---CCCcCHHHHHHHHHHH
Confidence 76443333333 4456899999999999987643 2333332 2256665410 00 0113678999999888
Q ss_pred HH
Q 010448 449 LA 450 (510)
Q Consensus 449 l~ 450 (510)
+.
T Consensus 431 m~ 432 (477)
T PLN02863 431 VS 432 (477)
T ss_pred hh
Confidence 74
No 170
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=89.78 E-value=3.6 Score=40.89 Aligned_cols=102 Identities=21% Similarity=0.213 Sum_probs=72.4
Q ss_pred CcEEEEec-CcccccC--hhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCc
Q 010448 301 IPVIGFIG-RLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 377 (510)
Q Consensus 301 ~~~i~~~G-rl~~~Kg--~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ad 377 (510)
+.+++..| .-...|. .+...+.++.+.+...++++.|++. ..+..+++....++.+...+.-+=.+...+++.||
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~--e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~ 253 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPD--EEERAEEIAKGLPNAVILAGKTSLEELAALIAGAD 253 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChH--HHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCC
Confidence 35777777 5557776 4577788888877678999999773 56677777777664333445556667778999999
Q ss_pred EEEeCCCCCCccHHHHHHHHhCCCcEEecCCC
Q 010448 378 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 409 (510)
Q Consensus 378 v~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg 409 (510)
++|.+. .|..=+ |.|.|+|+|+--...
T Consensus 254 l~I~~D----Sg~~Hl-AaA~~~P~I~iyg~t 280 (334)
T COG0859 254 LVIGND----SGPMHL-AAALGTPTIALYGPT 280 (334)
T ss_pred EEEccC----ChHHHH-HHHcCCCEEEEECCC
Confidence 999654 244433 799999999886443
No 171
>PLN02167 UDP-glycosyltransferase family protein
Probab=89.75 E-value=5.6 Score=41.68 Aligned_cols=139 Identities=13% Similarity=-0.020 Sum_probs=70.3
Q ss_pred CcEEEEecCccc--ccChhhHHHHHHhhhhCCcEEEEE-ecCCh-------hHHHHHHHHHHHCCCceEEeccCCHHHHH
Q 010448 301 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVL-GTGKK-------PMEKQLEQLEILYPEKARGVAKFNIPLAH 370 (510)
Q Consensus 301 ~~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~~l~i~-G~g~~-------~~~~~~~~l~~~~~~~v~~~~~~~~~~~~ 370 (510)
..+++..|.+.. .+.+..++.+++.. +.+|+++ +.... .+.+.+.+ +..++.....+.+...
T Consensus 281 svvyvsfGS~~~~~~~~~~ela~~l~~~---~~~flw~~~~~~~~~~~~~~~lp~~~~e---r~~~rg~v~~w~PQ~~-- 352 (475)
T PLN02167 281 SVVFLCFGSLGSLPAPQIKEIAQALELV---GCRFLWSIRTNPAEYASPYEPLPEGFMD---RVMGRGLVCGWAPQVE-- 352 (475)
T ss_pred ceEEEeecccccCCHHHHHHHHHHHHhC---CCcEEEEEecCcccccchhhhCChHHHH---HhccCeeeeccCCHHH--
Confidence 356677787632 33355555555444 5565544 32110 01111111 1122333345555553
Q ss_pred HHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC----ccc-eEEcCCceeEeccccccCCCCCccCHHHHHHHH
Q 010448 371 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVD-TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 445 (510)
Q Consensus 371 ~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e-~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i 445 (510)
+++...+..+-+. +--++++||+++|+|+|+-...+ ... +++.-+.|+.+...... ..-..-+.++++++|
T Consensus 353 -iL~h~~vg~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~-~~~~~~~~~~l~~av 428 (475)
T PLN02167 353 -ILAHKAIGGFVSH--CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVS-AYGEIVKADEIAGAV 428 (475)
T ss_pred -HhcCcccCeEEee--CCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccc-ccCCcccHHHHHHHH
Confidence 6766554333232 33458999999999999876432 221 23334566655100000 000123689999999
Q ss_pred HHHHHh
Q 010448 446 RRALAT 451 (510)
Q Consensus 446 ~~ll~~ 451 (510)
++++.+
T Consensus 429 ~~~m~~ 434 (475)
T PLN02167 429 RSLMDG 434 (475)
T ss_pred HHHhcC
Confidence 999975
No 172
>PLN03007 UDP-glucosyltransferase family protein
Probab=89.35 E-value=6.9 Score=41.10 Aligned_cols=144 Identities=12% Similarity=-0.010 Sum_probs=73.9
Q ss_pred CCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEE-EecCC---h---hHHHHHHHHHHHCCCceEEeccCCHHHHHHH
Q 010448 300 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV-LGTGK---K---PMEKQLEQLEILYPEKARGVAKFNIPLAHMI 372 (510)
Q Consensus 300 ~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i-~G~g~---~---~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~ 372 (510)
...+++..|..... ..+.+.+++..|...+..|++ ++... + .+.+.+.+... +.++....+.+.. .+
T Consensus 285 ~svvyvsfGS~~~~-~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~--~~g~~v~~w~PQ~---~i 358 (482)
T PLN03007 285 DSVIYLSFGSVASF-KNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTK--GKGLIIRGWAPQV---LI 358 (482)
T ss_pred CceEEEeecCCcCC-CHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhc--cCCEEEecCCCHH---HH
Confidence 34677788887432 123444444444333445444 44321 0 01112222221 2346655667765 47
Q ss_pred HHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC----ccceEEc-CCceeEeccc-cccCCCCCccCHHHHHHHHH
Q 010448 373 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSF-SVDCEAVDPVDVAAVSTTVR 446 (510)
Q Consensus 373 ~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e~v~~-~~~G~l~~~~-~~~~~~~~~~d~~~la~~i~ 446 (510)
++.+++..+-+. +--++++||+.+|+|+|+-...+ ....+.+ -+.|+-++.- ... .....-+.++++++++
T Consensus 359 L~h~~v~~fvtH--~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~-~~~~~~~~~~l~~av~ 435 (482)
T PLN03007 359 LDHQATGGFVTH--CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVK-VKGDFISREKVEKAVR 435 (482)
T ss_pred hccCccceeeec--CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccc-cccCcccHHHHHHHHH
Confidence 888887544443 34568999999999999986432 2221111 1233322100 000 0002247899999999
Q ss_pred HHHHhh
Q 010448 447 RALATY 452 (510)
Q Consensus 447 ~ll~~~ 452 (510)
+++.+.
T Consensus 436 ~~m~~~ 441 (482)
T PLN03007 436 EVIVGE 441 (482)
T ss_pred HHhcCc
Confidence 999763
No 173
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=89.28 E-value=6.8 Score=39.14 Aligned_cols=112 Identities=16% Similarity=0.103 Sum_probs=65.9
Q ss_pred HHHHhCCCCCCCCcEEEEecCc-ccccC--hhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCC----ceE-E
Q 010448 289 LQAEVGLPVDRNIPVIGFIGRL-EEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE----KAR-G 360 (510)
Q Consensus 289 ~~~~~g~~~~~~~~~i~~~Grl-~~~Kg--~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~----~v~-~ 360 (510)
+.+.+++.. +...+++..|.- .+.|. .+.+.+.++.+.+.+.+++++|...+ .+..+++....+. ++. .
T Consensus 170 ~~~~~~~~~-~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e--~~~~~~i~~~~~~~~~~~~~~l 246 (348)
T PRK10916 170 TCAAFSLSS-ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKD--HEAGNEILAALNTEQQAWCRNL 246 (348)
T ss_pred HHHHcCCCC-CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHh--HHHHHHHHHhcccccccceeec
Confidence 344455421 233566677663 46675 44667777777656788899986542 3333443333221 122 3
Q ss_pred eccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCC
Q 010448 361 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 408 (510)
Q Consensus 361 ~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~g 408 (510)
.+..+=.+...+++.||++|..- .|. +-=|.|.|+|+|+--.+
T Consensus 247 ~g~~sL~el~ali~~a~l~I~nD----TGp-~HlAaA~g~P~valfGp 289 (348)
T PRK10916 247 AGETQLEQAVILIAACKAIVTND----SGL-MHVAAALNRPLVALYGP 289 (348)
T ss_pred cCCCCHHHHHHHHHhCCEEEecC----ChH-HHHHHHhCCCEEEEECC
Confidence 33445556667999999999543 232 33478999999976543
No 174
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=88.88 E-value=8 Score=40.20 Aligned_cols=138 Identities=11% Similarity=0.011 Sum_probs=75.1
Q ss_pred CcEEEEecCcc--cccChhhHHHHHHhhhhCCcEEEE-EecCC-------hhHH---HHHHHHHHHCCCceEEeccCCHH
Q 010448 301 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIV-LGTGK-------KPME---KQLEQLEILYPEKARGVAKFNIP 367 (510)
Q Consensus 301 ~~~i~~~Grl~--~~Kg~~~li~a~~~l~~~~~~l~i-~G~g~-------~~~~---~~~~~l~~~~~~~v~~~~~~~~~ 367 (510)
..+++..|.+. +.+-++.+..+++.. ...|++ +.+.. .... ...+...++.+++.....+.++.
T Consensus 262 sVvyvsfGS~~~l~~~q~~ela~gL~~s---~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~ 338 (455)
T PLN02152 262 SVIYVSFGTMVELSKKQIEELARALIEG---KRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQI 338 (455)
T ss_pred ceEEEEecccccCCHHHHHHHHHHHHHc---CCCeEEEEecCcccccccccccccccccchhHHHhccCCeEEEeeCCHH
Confidence 46777788765 334455555666555 224444 44210 0000 00122222333444444556654
Q ss_pred HHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC----ccceEEcC-CceeEeccccccCCCCCccCHHHHH
Q 010448 368 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVS 442 (510)
Q Consensus 368 ~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e~v~~~-~~G~l~~~~~~~~~~~~~~d~~~la 442 (510)
++++...+..+-+. +-.++++||+.+|+|+|+-...+ ....+.+. +.|+-+... .-...+.++++
T Consensus 339 ---~iL~h~~vg~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~-----~~~~~~~e~l~ 408 (455)
T PLN02152 339 ---EVLRHRAVGCFVTH--CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVREN-----SEGLVERGEIR 408 (455)
T ss_pred ---HHhCCcccceEEee--CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecC-----cCCcCcHHHHH
Confidence 37888887665554 34568999999999999876432 22233221 244433100 00123789999
Q ss_pred HHHHHHHHh
Q 010448 443 TTVRRALAT 451 (510)
Q Consensus 443 ~~i~~ll~~ 451 (510)
+++.+++++
T Consensus 409 ~av~~vm~~ 417 (455)
T PLN02152 409 RCLEAVMEE 417 (455)
T ss_pred HHHHHHHhh
Confidence 999999976
No 175
>PLN02764 glycosyltransferase family protein
Probab=88.09 E-value=12 Score=38.81 Aligned_cols=139 Identities=8% Similarity=-0.033 Sum_probs=74.5
Q ss_pred CCcEEEEecCcccccChhhHHHHHHhhhhCCcEE-EEEec--CCh----hHHHHHHHHHHHCCCceEEeccCCHHHHHHH
Q 010448 300 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQI-IVLGT--GKK----PMEKQLEQLEILYPEKARGVAKFNIPLAHMI 372 (510)
Q Consensus 300 ~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l-~i~G~--g~~----~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~ 372 (510)
+..+.+..|.+.. -..+.+-+.+..|...+..| +++-. +.+ .+.+.+++..... .+....+.++.+ +
T Consensus 257 ~sVvyvsfGS~~~-~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~gr--G~v~~~W~PQ~~---v 330 (453)
T PLN02764 257 DSVVFCALGSQVI-LEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGR--GVVWGGWVQQPL---I 330 (453)
T ss_pred CceEEEeeccccc-CCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccC--CcEEeCCCCHHH---H
Confidence 4467778888743 23355666666554433333 33332 111 1111122222111 244445666664 6
Q ss_pred HHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC----ccceEE-cCCceeEeccccccCCCCCccCHHHHHHHHHH
Q 010448 373 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 447 (510)
Q Consensus 373 ~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e~v~-~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ 447 (510)
++...+..+-+. +-.++.+||+.+|+|+|+-...+ ....+. .-+.|+.+..-. ...-+.+++.+++++
T Consensus 331 L~h~~v~~FvtH--~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~-----~~~~~~e~i~~av~~ 403 (453)
T PLN02764 331 LSHPSVGCFVSH--CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREE-----TGWFSKESLRDAINS 403 (453)
T ss_pred hcCcccCeEEec--CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEecccc-----CCccCHHHHHHHHHH
Confidence 777655443343 45678999999999999986433 233442 234565431000 001378999999999
Q ss_pred HHHh
Q 010448 448 ALAT 451 (510)
Q Consensus 448 ll~~ 451 (510)
++.+
T Consensus 404 vm~~ 407 (453)
T PLN02764 404 VMKR 407 (453)
T ss_pred HhcC
Confidence 9976
No 176
>PLN02555 limonoid glucosyltransferase
Probab=88.03 E-value=14 Score=38.79 Aligned_cols=140 Identities=11% Similarity=0.015 Sum_probs=71.7
Q ss_pred CcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEE-ecC--ChhHH-HHH-HHHHHHCCCceEEeccCCHHHHHHHHHh
Q 010448 301 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTG--KKPME-KQL-EQLEILYPEKARGVAKFNIPLAHMIIAG 375 (510)
Q Consensus 301 ~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~-G~g--~~~~~-~~~-~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 375 (510)
..+++..|.+.. -..+.+.+++..+...+.+|+++ ... ..... ..+ +....+.++++....+.+... +++.
T Consensus 278 sVvyvsfGS~~~-~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~---iL~H 353 (480)
T PLN02555 278 SVVYISFGTVVY-LKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEK---VLAH 353 (480)
T ss_pred ceeEEEeccccC-CCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCChhhhhhcCCceEEEecCCHHH---HhCC
Confidence 356777787642 23334444444444445576655 311 00000 000 111122233444445566543 5644
Q ss_pred --CcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC----ccceEEcC-CceeEeccccccCCCCCccCHHHHHHHHHHH
Q 010448 376 --ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 448 (510)
Q Consensus 376 --adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e~v~~~-~~G~l~~~~~~~~~~~~~~d~~~la~~i~~l 448 (510)
+.+|| +. +--++++||+.+|+|+|+...-+ ....+.+. +.|+-+..... .-..-+.+++.++|+++
T Consensus 354 ~~v~~Fv--tH--~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~---~~~~v~~~~v~~~v~~v 426 (480)
T PLN02555 354 PSVACFV--TH--CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEA---ENKLITREEVAECLLEA 426 (480)
T ss_pred CccCeEE--ec--CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCcc---ccCcCcHHHHHHHHHHH
Confidence 45555 32 34568999999999999886432 22333333 56665410000 00113678999999999
Q ss_pred HHh
Q 010448 449 LAT 451 (510)
Q Consensus 449 l~~ 451 (510)
+.+
T Consensus 427 m~~ 429 (480)
T PLN02555 427 TVG 429 (480)
T ss_pred hcC
Confidence 975
No 177
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=87.73 E-value=18 Score=35.53 Aligned_cols=104 Identities=12% Similarity=0.083 Sum_probs=63.7
Q ss_pred CcEEEEecCcccccC--hhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcE
Q 010448 301 IPVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 378 (510)
Q Consensus 301 ~~~i~~~Grl~~~Kg--~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv 378 (510)
+.+++..|.-...|. .+...+.+..+.+.+.++++.|.++. ..+..+++....+ .+...+..+-.+...+++.||+
T Consensus 179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~-e~~~~~~i~~~~~-~~~l~g~~sL~elaali~~a~l 256 (322)
T PRK10964 179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH-EEQRAKRLAEGFP-YVEVLPKLSLEQVARVLAGAKA 256 (322)
T ss_pred CeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHccCC-cceecCCCCHHHHHHHHHhCCE
Confidence 345445555445565 44677777777666778888633332 2333444444332 2444455566677789999999
Q ss_pred EEeCCCCCCccHHHHHHHHhCCCcEEecCCCcc
Q 010448 379 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV 411 (510)
Q Consensus 379 ~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~ 411 (510)
+|..- .| .+-=|.|+|+|+|+--.+..+
T Consensus 257 ~I~nD----SG-p~HlA~A~g~p~valfGpt~p 284 (322)
T PRK10964 257 VVSVD----TG-LSHLTAALDRPNITLYGPTDP 284 (322)
T ss_pred EEecC----Cc-HHHHHHHhCCCEEEEECCCCc
Confidence 99543 23 334489999999987655443
No 178
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=87.71 E-value=2.8 Score=43.96 Aligned_cols=185 Identities=14% Similarity=0.045 Sum_probs=108.2
Q ss_pred HHHhCCCCCCCCcEEEEecCcccc--cChhhHHHHHHhhhhCCcEEEEEec---CChhHHHHHHHHHHHCCCceEEeccC
Q 010448 290 QAEVGLPVDRNIPVIGFIGRLEEQ--KGSDILAAAIPHFIKENVQIIVLGT---GKKPMEKQLEQLEILYPEKARGVAKF 364 (510)
Q Consensus 290 ~~~~g~~~~~~~~~i~~~Grl~~~--Kg~~~li~a~~~l~~~~~~l~i~G~---g~~~~~~~~~~l~~~~~~~v~~~~~~ 364 (510)
|..+|+|+ +.+++.....+-+. +-++.-.++++.+ |+..+++.-- |+..+...+++++.+ +++|.+..-.
T Consensus 750 r~~y~Lp~--d~vvf~~FNqLyKidP~~l~~W~~ILk~V--PnS~LwllrfPa~ge~rf~ty~~~~Gl~-p~riifs~va 824 (966)
T KOG4626|consen 750 RSQYGLPE--DAVVFCNFNQLYKIDPSTLQMWANILKRV--PNSVLWLLRFPAVGEQRFRTYAEQLGLE-PDRIIFSPVA 824 (966)
T ss_pred CCCCCCCC--CeEEEeechhhhcCCHHHHHHHHHHHHhC--CcceeEEEeccccchHHHHHHHHHhCCC-ccceeecccc
Confidence 44567763 44666666555322 2233334444443 7777777653 333455555555433 3467665544
Q ss_pred CHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccc-----eEEcCCceeEeccccccCCCCCccCHH
Q 010448 365 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD-----TVEEGFTGFQMGSFSVDCEAVDPVDVA 439 (510)
Q Consensus 365 ~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e-----~v~~~~~G~l~~~~~~~~~~~~~~d~~ 439 (510)
..++--.-.+-+||.+-+...-| -.+-+|.+.+|+|+|+-...-+.. .+..-++|-++ ..+-+
T Consensus 825 ~k~eHvrr~~LaDv~LDTplcnG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hli-----------ak~~e 892 (966)
T KOG4626|consen 825 AKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLI-----------AKNRE 892 (966)
T ss_pred chHHHHHhhhhhhhcccCcCcCC-cccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHH-----------hhhHH
Confidence 44444457888999887766533 234578889999999765322221 22223444443 46667
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHH---h--hccCChHHHHHHHHHHHHHHHHcCCCCC
Q 010448 440 AVSTTVRRALATYGTQALAEMMKNG---M--AQDLSWKGPAKKWEETLLNLEVAGSEPG 493 (510)
Q Consensus 440 ~la~~i~~ll~~~~~~~~~~~~~~~---~--~~~fs~~~~~~~~~~~y~~l~~~~~~~~ 493 (510)
+..+.-.++-.| .+.++++..+- + ..-|+-.+.+..++++|.+..+.....+
T Consensus 893 EY~~iaV~Latd--~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~y~~G~ 949 (966)
T KOG4626|consen 893 EYVQIAVRLATD--KEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKKYCSGE 949 (966)
T ss_pred HHHHHHHHhhcC--HHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHHhccCC
Confidence 777666666665 44444443332 2 4569999999999999999988754433
No 179
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=87.62 E-value=4 Score=38.76 Aligned_cols=90 Identities=18% Similarity=0.316 Sum_probs=58.0
Q ss_pred EEEEecCcccccChhhHHHHHHhhhhCCcEE-EEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEe
Q 010448 303 VIGFIGRLEEQKGSDILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 381 (510)
Q Consensus 303 ~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l-~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ 381 (510)
+++..|.-++ |+ +.++.+..|.+.++.+ +++|++++.+.+ +++.+..+++ +..+ .+.+++..+|..||+.+.
T Consensus 161 ilI~lGGsDp-k~--lt~kvl~~L~~~~~nl~iV~gs~~p~l~~-l~k~~~~~~~-i~~~--~~~~dma~LMke~d~aI~ 233 (318)
T COG3980 161 ILITLGGSDP-KN--LTLKVLAELEQKNVNLHIVVGSSNPTLKN-LRKRAEKYPN-INLY--IDTNDMAELMKEADLAIS 233 (318)
T ss_pred EEEEccCCCh-hh--hHHHHHHHhhccCeeEEEEecCCCcchhH-HHHHHhhCCC-eeeE--ecchhHHHHHHhcchhee
Confidence 5666666554 33 4556666665545443 345666555544 4555555553 4433 345667789999999985
Q ss_pred CCCCCCccHHHHHHHHhCCCcEE
Q 010448 382 PSRFEPCGLIQLHAMRYGTVPIV 404 (510)
Q Consensus 382 ps~~E~~g~~~~Eama~G~Pvv~ 404 (510)
. -|.++.||...|+|.++
T Consensus 234 A-----aGstlyEa~~lgvP~l~ 251 (318)
T COG3980 234 A-----AGSTLYEALLLGVPSLV 251 (318)
T ss_pred c-----cchHHHHHHHhcCCceE
Confidence 4 48999999999999544
No 180
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=87.60 E-value=21 Score=34.75 Aligned_cols=87 Identities=11% Similarity=-0.010 Sum_probs=52.5
Q ss_pred ChhhHHHHHHhhhhC-CcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHH
Q 010448 315 GSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQL 393 (510)
Q Consensus 315 g~~~li~a~~~l~~~-~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~ 393 (510)
.++.+.+++..+.+. +.+++++.-....-.+..+++....+.........+.++...++++||++|-.... .++
T Consensus 189 ~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~~vI~~RlH-----~~I 263 (298)
T TIGR03609 189 RLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASARLVIGMRLH-----ALI 263 (298)
T ss_pred HHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCCEEEEechH-----HHH
Confidence 355777777777653 66665555322112344555555543222222444566666799999988844432 456
Q ss_pred HHHHhCCCcEEec
Q 010448 394 HAMRYGTVPIVAS 406 (510)
Q Consensus 394 Eama~G~Pvv~s~ 406 (510)
-|+.+|+|+++-.
T Consensus 264 ~A~~~gvP~i~i~ 276 (298)
T TIGR03609 264 LAAAAGVPFVALS 276 (298)
T ss_pred HHHHcCCCEEEee
Confidence 6899999999663
No 181
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=86.73 E-value=16 Score=34.77 Aligned_cols=138 Identities=14% Similarity=0.088 Sum_probs=74.6
Q ss_pred EEecCcccccChhhHHHHHHhhhh-CCcEEEEEecCC-hhHHHHHH--------------HHHHHCCCceEEeccCCHHH
Q 010448 305 GFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGK-KPMEKQLE--------------QLEILYPEKARGVAKFNIPL 368 (510)
Q Consensus 305 ~~~Grl~~~Kg~~~li~a~~~l~~-~~~~l~i~G~g~-~~~~~~~~--------------~l~~~~~~~v~~~~~~~~~~ 368 (510)
.|+||.+..||+..+++..++..+ ++.+-++-|-.. +..-...+ +....-+.-+...+.+-.++
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~~~~~t~~~GierS~A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E 266 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKPAGFKTIMEGIERSPAKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSE 266 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTTTT-EEEEE---SSTHHHHHHHTT--EEEE-CTGGGG---SSS--EEEESS--HHH
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCCcchhHHhhhhhcCCceeeeecCCcccccCccccccCcccCCCCcceecchhhhHH
Confidence 799999999999999999888766 477777877422 11111111 11111112356667776676
Q ss_pred HHHHHHhCcEEEeCCCC------CCccHHHHHHHHhCCCcEEe-cCCCccceE------EcCCceeEeccccccCCCCCc
Q 010448 369 AHMIIAGADFILIPSRF------EPCGLIQLHAMRYGTVPIVA-STGGLVDTV------EEGFTGFQMGSFSVDCEAVDP 435 (510)
Q Consensus 369 ~~~~~~~adv~v~ps~~------E~~g~~~~Eama~G~Pvv~s-~~gg~~e~v------~~~~~G~l~~~~~~~~~~~~~ 435 (510)
.-+.|+.+-+++.-+.. +.+-.+.+|..|||.-.|-- ..|....+- .+...|.+ |++.
T Consensus 267 ~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~I---------~~De 337 (355)
T PF11440_consen 267 GLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSAI---------YFDE 337 (355)
T ss_dssp HHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-E---------EE-T
T ss_pred HHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCccee---------Eecc
Confidence 66789998888776642 45778999999999865544 333322211 11223433 3488
Q ss_pred cCHHHHHHHHHHHHHh
Q 010448 436 VDVAAVSTTVRRALAT 451 (510)
Q Consensus 436 ~d~~~la~~i~~ll~~ 451 (510)
.|.++-.+.|.++.++
T Consensus 338 ~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 338 NDLESTVEKLIEVANN 353 (355)
T ss_dssp TSHHHHHHHHHHHHT-
T ss_pred chHHHHHHHHHHHhcc
Confidence 8999998888887765
No 182
>PLN00414 glycosyltransferase family protein
Probab=85.93 E-value=28 Score=36.15 Aligned_cols=140 Identities=9% Similarity=-0.050 Sum_probs=77.0
Q ss_pred CCcEEEEecCcccccChhhHHHHHHhhhhCCcEE-EEEec--C--C--hhHHHHHHHHHHHCCCceEEeccCCHHHHHHH
Q 010448 300 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQI-IVLGT--G--K--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 372 (510)
Q Consensus 300 ~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l-~i~G~--g--~--~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~ 372 (510)
...+.+..|.+.... .+++.+.+.-|...+..| .++-. + . +.+.+.+.+.....+ .+...+.++.. +
T Consensus 252 ~sVvyvsfGS~~~~~-~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g--~vv~~w~PQ~~---v 325 (446)
T PLN00414 252 GSVVFCAFGTQFFFE-KDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRG--IVWEGWVEQPL---I 325 (446)
T ss_pred CceEEEeecccccCC-HHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCC--eEEeccCCHHH---H
Confidence 446777788865332 346666666555444454 33322 1 1 112222333322222 33345566553 6
Q ss_pred HHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC----ccceE-EcCCceeEeccccccCCCCCccCHHHHHHHHHH
Q 010448 373 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 447 (510)
Q Consensus 373 ~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e~v-~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ 447 (510)
++...+..+-+. +-.++++||+.+|+|+|+-...+ ....+ +.-+.|..+..- .+ ..-+.+++++++++
T Consensus 326 L~h~~v~~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~-~~----~~~~~~~i~~~v~~ 398 (446)
T PLN00414 326 LSHPSVGCFVNH--CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRE-DS----GWFSKESLRDTVKS 398 (446)
T ss_pred hcCCccceEEec--CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccc-cC----CccCHHHHHHHHHH
Confidence 877755333333 44568999999999999876432 33344 234667655100 00 02478999999999
Q ss_pred HHHhh
Q 010448 448 ALATY 452 (510)
Q Consensus 448 ll~~~ 452 (510)
++.+.
T Consensus 399 ~m~~~ 403 (446)
T PLN00414 399 VMDKD 403 (446)
T ss_pred HhcCC
Confidence 99763
No 183
>PLN02207 UDP-glycosyltransferase
Probab=85.53 E-value=20 Score=37.46 Aligned_cols=140 Identities=10% Similarity=-0.029 Sum_probs=71.4
Q ss_pred CcEEEEecCccc--ccChhhHHHHHHhhhhCCcEEEEE-ecCChhHHHHH-HHHHHHCCCceEEeccCCHHHHHHHHHhC
Q 010448 301 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQL-EQLEILYPEKARGVAKFNIPLAHMIIAGA 376 (510)
Q Consensus 301 ~~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~~l~i~-G~g~~~~~~~~-~~l~~~~~~~v~~~~~~~~~~~~~~~~~a 376 (510)
..+.+..|.... .+-+..+..+++.. +..|+++ .+......+.+ +....+.+++.....+.++.+ +++..
T Consensus 276 sVVyvSfGS~~~~~~~q~~ela~~l~~~---~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~---IL~H~ 349 (468)
T PLN02207 276 SVVFLCFGSMGRLRGPLVKEIAHGLELC---QYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQVE---ILAHK 349 (468)
T ss_pred cEEEEEeccCcCCCHHHHHHHHHHHHHC---CCcEEEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHHH---Hhccc
Confidence 467777787642 22345555555544 3354443 32110000000 111112233444445566553 67777
Q ss_pred cEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC----ccceEEc-CCceeEecc-ccccCCCCCccCHHHHHHHHHHHHH
Q 010448 377 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALA 450 (510)
Q Consensus 377 dv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e~v~~-~~~G~l~~~-~~~~~~~~~~~d~~~la~~i~~ll~ 450 (510)
.+..+-+. +--++++||+.+|+|+|+-...+ ....+.+ -+.|+-++. ...+ .-..-+.+++.++|++++.
T Consensus 350 ~vg~FvTH--~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~--~~~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 350 AVGGFVSH--CGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVH--SDEIVNANEIETAIRCVMN 425 (468)
T ss_pred ccceeeec--CccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccc--cCCcccHHHHHHHHHHHHh
Confidence 67554444 33457899999999999876433 2222222 345553310 0000 0012377899999999996
No 184
>PLN02554 UDP-glycosyltransferase family protein
Probab=85.29 E-value=19 Score=37.88 Aligned_cols=89 Identities=10% Similarity=0.010 Sum_probs=50.2
Q ss_pred ceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC----cc-ceEEcCCceeEeccc-cccC
Q 010448 357 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LV-DTVEEGFTGFQMGSF-SVDC 430 (510)
Q Consensus 357 ~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~-e~v~~~~~G~l~~~~-~~~~ 430 (510)
++....+.+... +++...+..+-+. +--++++||+.+|+|+|+-...+ .. ..++.-+.|..++.. ....
T Consensus 343 ~g~v~~W~PQ~~---iL~H~~v~~FvtH--~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~ 417 (481)
T PLN02554 343 IGKVIGWAPQVA---VLAKPAIGGFVTH--CGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDL 417 (481)
T ss_pred CceEEeeCCHHH---HhCCcccCccccc--CccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccc
Confidence 344445566553 6754444333333 34568999999999999876432 22 234444567665200 0000
Q ss_pred C--CCCccCHHHHHHHHHHHHH
Q 010448 431 E--AVDPVDVAAVSTTVRRALA 450 (510)
Q Consensus 431 ~--~~~~~d~~~la~~i~~ll~ 450 (510)
. .-..-+.++++++|++++.
T Consensus 418 ~~~~~~~~~~e~l~~av~~vm~ 439 (481)
T PLN02554 418 LAGEMETVTAEEIERGIRCLME 439 (481)
T ss_pred cccccCeEcHHHHHHHHHHHhc
Confidence 0 0012378999999999996
No 185
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=84.45 E-value=45 Score=33.03 Aligned_cols=140 Identities=13% Similarity=0.099 Sum_probs=77.0
Q ss_pred CCcEEEEecCcc-cccChhhHHHHHHhhhhCC-cEEEEEecCC-hhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhC
Q 010448 300 NIPVIGFIGRLE-EQKGSDILAAAIPHFIKEN-VQIIVLGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 376 (510)
Q Consensus 300 ~~~~i~~~Grl~-~~Kg~~~li~a~~~l~~~~-~~l~i~G~g~-~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~a 376 (510)
...+++.+|.-. -..=++..+.|...+..-+ .-++|.|+-- ....+.+...+.+.+ .+.. ..|..+ ...+++.|
T Consensus 219 ~~~Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p-~i~I-~~f~~~-~~~ll~gA 295 (400)
T COG4671 219 GFDILVSVGGGADGAELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRP-HISI-FEFRND-FESLLAGA 295 (400)
T ss_pred cceEEEecCCChhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCC-CeEE-EEhhhh-HHHHHHhh
Confidence 346777887632 2222444444444442212 2366777653 334455555555444 3443 334434 34699999
Q ss_pred cEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccc-e-EEc---CCceeEeccccccCCCCCccCHHHHHHHHHHHHHh
Q 010448 377 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD-T-VEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 451 (510)
Q Consensus 377 dv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e-~-v~~---~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~ 451 (510)
+..|.-.- =+++.|-+++|||.+.-....-.+ . +.. ..-|+.- ...-+.-+++.|+++|..+++.
T Consensus 296 ~~vVSm~G----YNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~d------vL~pe~lt~~~La~al~~~l~~ 365 (400)
T COG4671 296 RLVVSMGG----YNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVD------VLLPENLTPQNLADALKAALAR 365 (400)
T ss_pred heeeeccc----chhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcce------eeCcccCChHHHHHHHHhcccC
Confidence 99995442 257889999999998776443322 1 111 1222210 0011233589999999988885
Q ss_pred h
Q 010448 452 Y 452 (510)
Q Consensus 452 ~ 452 (510)
|
T Consensus 366 P 366 (400)
T COG4671 366 P 366 (400)
T ss_pred C
Confidence 3
No 186
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=83.88 E-value=21 Score=37.39 Aligned_cols=84 Identities=10% Similarity=-0.104 Sum_probs=54.3
Q ss_pred eEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC----ccceE-EcCCceeEeccccccCCC
Q 010448 358 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEA 432 (510)
Q Consensus 358 v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e~v-~~~~~G~l~~~~~~~~~~ 432 (510)
+....+.++.+ +++...+..+-+. +-.++.+||+.+|+|+|+-...+ ....+ +.-+.|..++...
T Consensus 340 ~vv~~W~PQ~~---iL~h~~vg~FitH--~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~----- 409 (481)
T PLN02992 340 FVVPSWAPQAE---ILAHQAVGGFLTH--CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK----- 409 (481)
T ss_pred EEEeecCCHHH---HhCCcccCeeEec--CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCC-----
Confidence 55556666553 6888777444443 44568999999999999986433 33344 2445666551000
Q ss_pred CCccCHHHHHHHHHHHHHhh
Q 010448 433 VDPVDVAAVSTTVRRALATY 452 (510)
Q Consensus 433 ~~~~d~~~la~~i~~ll~~~ 452 (510)
..-+.++++++|.+++.+.
T Consensus 410 -~~~~~~~l~~av~~vm~~~ 428 (481)
T PLN02992 410 -EVISRSKIEALVRKVMVEE 428 (481)
T ss_pred -CcccHHHHHHHHHHHhcCC
Confidence 1247899999999999763
No 187
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=81.61 E-value=6.2 Score=37.81 Aligned_cols=100 Identities=15% Similarity=0.132 Sum_probs=57.3
Q ss_pred CCcEEEEecCcccc-------cChhhHHHHHHhhhh--CCcEEEEEecCCh---hHHHHHHHHHHHCCCceEEeccCCHH
Q 010448 300 NIPVIGFIGRLEEQ-------KGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEILYPEKARGVAKFNIP 367 (510)
Q Consensus 300 ~~~~i~~~Grl~~~-------Kg~~~li~a~~~l~~--~~~~l~i~G~g~~---~~~~~~~~l~~~~~~~v~~~~~~~~~ 367 (510)
++.+|+++...... .....+++.+..+.+ |+.+++|==.... .-...+.++.. ..+ +.... +.-
T Consensus 116 ~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~-~~~-~~~~~--~~~ 191 (269)
T PF05159_consen 116 NKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPN-LPN-VVIID--DDV 191 (269)
T ss_pred CCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhc-CCC-eEEEC--CCC
Confidence 45678888877554 133445555555544 4677765543210 01122333322 222 32221 222
Q ss_pred HHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCC
Q 010448 368 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 408 (510)
Q Consensus 368 ~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~g 408 (510)
....++..||.++.-+ +.+-+||+..|+||++.-..
T Consensus 192 ~~~~Ll~~s~~Vvtin-----StvGlEAll~gkpVi~~G~~ 227 (269)
T PF05159_consen 192 NLYELLEQSDAVVTIN-----STVGLEALLHGKPVIVFGRA 227 (269)
T ss_pred CHHHHHHhCCEEEEEC-----CHHHHHHHHcCCceEEecCc
Confidence 3346899999988443 67899999999999997543
No 188
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=80.19 E-value=3 Score=34.77 Aligned_cols=45 Identities=13% Similarity=0.015 Sum_probs=29.4
Q ss_pred HHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCcc
Q 010448 367 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV 411 (510)
Q Consensus 367 ~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~ 411 (510)
+.+..++..+|++|--|..+..--.+-.++.+|+|+|.--+|...
T Consensus 59 ~~l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGTTG~~~ 103 (124)
T PF01113_consen 59 DDLEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGTTGFSD 103 (124)
T ss_dssp S-HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-SSSHH
T ss_pred hhHHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEECCCCCH
Confidence 345568888999998876555555566678889999988777644
No 189
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=80.01 E-value=9.3 Score=34.38 Aligned_cols=39 Identities=15% Similarity=0.091 Sum_probs=27.9
Q ss_pred hHHHHHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecC
Q 010448 207 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 254 (510)
Q Consensus 207 ~~~~~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpn 254 (510)
.+.+..++..|.|.+.|+..++.+.+ .|.+++ ++.+.-|
T Consensus 141 ~~~r~~l~~f~~i~aqs~~da~r~~~---lG~~~~------~v~v~Gn 179 (186)
T PF04413_consen 141 FLFRPLLSRFDRILAQSEADAERFRK---LGAPPE------RVHVTGN 179 (186)
T ss_dssp HHHHHHGGG-SEEEESSHHHHHHHHT---TT-S--------SEEE---
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCCcc------eEEEeCc
Confidence 46688899999999999999999998 787765 6777665
No 190
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=79.00 E-value=1.5 Score=37.02 Aligned_cols=19 Identities=26% Similarity=0.434 Sum_probs=16.2
Q ss_pred hHHHHHHHCCCcEEEEeeC
Q 010448 8 KLDSFIQANGHRVMTIAPR 26 (510)
Q Consensus 8 ~la~~l~~~Gh~V~vi~p~ 26 (510)
.|+++|+++||+|++.++.
T Consensus 17 ala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 17 ALARALRRRGHEVRLATPP 35 (139)
T ss_dssp HHHHHHHHTT-EEEEEETG
T ss_pred HHHHHHhccCCeEEEeecc
Confidence 6899999999999988865
No 191
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=78.99 E-value=5.9 Score=41.13 Aligned_cols=137 Identities=20% Similarity=0.213 Sum_probs=88.8
Q ss_pred HHHHHhCCCCCCCCcEEEEecCcccccC----hhhHHHHHHhhhhC-----CcEEEEEecCC-h--hHHHHHHHH----H
Q 010448 288 ALQAEVGLPVDRNIPVIGFIGRLEEQKG----SDILAAAIPHFIKE-----NVQIIVLGTGK-K--PMEKQLEQL----E 351 (510)
Q Consensus 288 ~~~~~~g~~~~~~~~~i~~~Grl~~~Kg----~~~li~a~~~l~~~-----~~~l~i~G~g~-~--~~~~~~~~l----~ 351 (510)
.+.+.+|...+++...=+-+-|+.++|. +.-++-...+++++ --+.+++|... + .+.+.+.++ +
T Consensus 550 ~le~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~riK~e~~k~fvprtvm~GGKaapgY~mAK~Iiklit~V~ 629 (843)
T KOG2099|consen 550 YLEKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKEEPAKAFVPRTVMIGGKAAPGYHMAKLIIKLITAVA 629 (843)
T ss_pred HHHHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCceEEEEcCccCchhHHHHHHHHHHHHHH
Confidence 3455677766655555567889999985 33345555566542 13566666422 1 122333333 2
Q ss_pred HH------CC--CceEEeccCCHHHHHHHHHhCcEE--EeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcC--Cc
Q 010448 352 IL------YP--EKARGVAKFNIPLAHMIIAGADFI--LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG--FT 419 (510)
Q Consensus 352 ~~------~~--~~v~~~~~~~~~~~~~~~~~adv~--v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~--~~ 419 (510)
.. .+ -+|+|...+.......++.++|+- +.+.-.|.+|..-+.-|..|+-+|.|-.|...|+.++- .|
T Consensus 630 dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANVEm~eE~GeeN 709 (843)
T KOG2099|consen 630 DVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEMAEEAGEEN 709 (843)
T ss_pred HHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccchHHHHHcCccc
Confidence 21 11 257777777777776788888885 44445699999999999999999999999888776652 46
Q ss_pred eeEec
Q 010448 420 GFQMG 424 (510)
Q Consensus 420 G~l~~ 424 (510)
-|+||
T Consensus 710 ~FiFG 714 (843)
T KOG2099|consen 710 FFIFG 714 (843)
T ss_pred EEEec
Confidence 67776
No 192
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=75.37 E-value=24 Score=37.10 Aligned_cols=152 Identities=14% Similarity=0.068 Sum_probs=88.2
Q ss_pred cccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCC-CCccH
Q 010448 312 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF-EPCGL 390 (510)
Q Consensus 312 ~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~-E~~g~ 390 (510)
-.||-+..++++.+. -.++-.|.+... .... .+..|.-++..+.++...+++.+.++|=.-.- | |-
T Consensus 289 ~w~~k~~~l~~l~~~--~eih~tV~~~~~--~~~~-------~P~~V~NHG~l~~~ef~~lL~~akvfiGlGfP~E--gP 355 (559)
T PF15024_consen 289 MWKGKEKYLDVLHKY--MEIHGTVYDEPQ--RPPN-------VPSFVKNHGILSGDEFQQLLRKAKVFIGLGFPYE--GP 355 (559)
T ss_pred hhcCcHHHHHHHHhh--cEEEEEeccCCC--CCcc-------cchhhhhcCcCCHHHHHHHHHhhhEeeecCCCCC--CC
Confidence 355666666666554 234444433221 0011 11223445566788888999999999954332 3 55
Q ss_pred HHHHHHHhCCCcEEecCCCcc-----ceEEcCCceeEeccc---------cccCCCCCccCHHHHHHHHHHHHHhhCHHH
Q 010448 391 IQLHAMRYGTVPIVASTGGLV-----DTVEEGFTGFQMGSF---------SVDCEAVDPVDVAAVSTTVRRALATYGTQA 456 (510)
Q Consensus 391 ~~~Eama~G~Pvv~s~~gg~~-----e~v~~~~~G~l~~~~---------~~~~~~~~~~d~~~la~~i~~ll~~~~~~~ 456 (510)
+.+||+|+|+|.|-....... +...+.-+---+.+. -.....|+.+|.+++-+||++++.++-
T Consensus 356 aPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhVytVd~~n~~~v~~Avk~il~~~v--- 432 (559)
T PF15024_consen 356 APLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHVYTVDINNSTEVEAAVKAILATPV--- 432 (559)
T ss_pred ChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeEEEEcCCCHHHHHHHHHHHHhcCC---
Confidence 689999999999987643221 122211000000000 001123388999999999999998731
Q ss_pred HHHHHHHHhhccCChHHHHHHHHHHHHH
Q 010448 457 LAEMMKNGMAQDLSWKGPAKKWEETLLN 484 (510)
Q Consensus 457 ~~~~~~~~~~~~fs~~~~~~~~~~~y~~ 484 (510)
...+--.||-+.+.++...+++.
T Consensus 433 -----~Py~P~efT~egmLeRv~~~ie~ 455 (559)
T PF15024_consen 433 -----EPYLPYEFTCEGMLERVNALIEK 455 (559)
T ss_pred -----CCcCCcccCHHHHHHHHHHHHHh
Confidence 12344678888888888766653
No 193
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=71.23 E-value=29 Score=36.27 Aligned_cols=57 Identities=14% Similarity=0.029 Sum_probs=41.2
Q ss_pred HHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCC-CcEEecC--CCccceEEcCCceeEe
Q 010448 367 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-VPIVAST--GGLVDTVEEGFTGFQM 423 (510)
Q Consensus 367 ~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~-Pvv~s~~--gg~~e~v~~~~~G~l~ 423 (510)
....+.++.|...+.|.-.++..-.++||+..|| |||.++. ....+.++-..-++.+
T Consensus 335 ~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v 394 (464)
T KOG1021|consen 335 LNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFV 394 (464)
T ss_pred chHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEE
Confidence 4455789999999999999988889999999987 6667763 3444444443334433
No 194
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=68.98 E-value=1.3e+02 Score=30.27 Aligned_cols=165 Identities=15% Similarity=0.159 Sum_probs=104.2
Q ss_pred EEEEecCcccccChhhHHHHHHhhhhCCcEEEEEec-CC----hhHHHHHHHHHHHC-CCceEEeccC-----CHHHHHH
Q 010448 303 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT-GK----KPMEKQLEQLEILY-PEKARGVAKF-----NIPLAHM 371 (510)
Q Consensus 303 ~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~-g~----~~~~~~~~~l~~~~-~~~v~~~~~~-----~~~~~~~ 371 (510)
-|=|.|.-++.+-.....+.+.+.+++++.++|+-. |. .++.+++.+..... |+.+.+...- ..++...
T Consensus 156 ~iP~ygsyte~dpv~ia~egv~~fKke~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~a 235 (483)
T KOG0780|consen 156 RVPFYGSYTEADPVKIASEGVDRFKKENFDVIIVDTSGRHKQEASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARA 235 (483)
T ss_pred CCeeEecccccchHHHHHHHHHHHHhcCCcEEEEeCCCchhhhHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHH
Confidence 344777888888888999999999999999999975 32 34555555555543 4566654433 2344445
Q ss_pred HHHhCcEE--EeCCCC----CCccHHHHHHHHhCCCcEEecCCCccceEEcCC----ceeEeccccccCCCCCccCHHHH
Q 010448 372 IIAGADFI--LIPSRF----EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF----TGFQMGSFSVDCEAVDPVDVAAV 441 (510)
Q Consensus 372 ~~~~adv~--v~ps~~----E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~----~G~l~~~~~~~~~~~~~~d~~~l 441 (510)
+-...|+. +++-.- -|..++.. .+.++||+---+|..-|-++.-. .+-++ --+|.+.|
T Consensus 236 Fk~~vdvg~vIlTKlDGhakGGgAlSaV--aaTksPIiFIGtGEhmdDlE~F~pk~FvsrlL----------GmGDi~gl 303 (483)
T KOG0780|consen 236 FKETVDVGAVILTKLDGHAKGGGALSAV--AATKSPIIFIGTGEHMDDLEPFDPKPFVSRLL----------GMGDIEGL 303 (483)
T ss_pred HHHhhccceEEEEecccCCCCCceeeeh--hhhCCCEEEEecCccccccCCCChHHHHHHHh----------ccccHHHH
Confidence 66666664 333221 23445555 46789998887776555444311 11111 34889999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHhhccCChHHHHHHHHHHHH
Q 010448 442 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 483 (510)
Q Consensus 442 a~~i~~ll~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 483 (510)
.+.+.++..+..++.. ++-.+-+|+...+.+++..+..
T Consensus 304 vek~~ev~~~d~~el~----~kl~~gkFtlrd~y~Qfq~imk 341 (483)
T KOG0780|consen 304 VEKVQEVGKDDAKELV----EKLKQGKFTLRDFYDQFQNIMK 341 (483)
T ss_pred HHHHHHHhhhhHHHHH----HHHHhCCccHHHHHHHHHHHHh
Confidence 9999988843122332 3334568999999999988775
No 195
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=66.47 E-value=54 Score=28.96 Aligned_cols=104 Identities=19% Similarity=0.286 Sum_probs=61.4
Q ss_pred cccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCC-ceEEe--ccCCHHHHHHHH-----HhCcEEEeCC
Q 010448 312 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGV--AKFNIPLAHMII-----AGADFILIPS 383 (510)
Q Consensus 312 ~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~-~v~~~--~~~~~~~~~~~~-----~~adv~v~ps 383 (510)
..-|.|.+.+.+....+++.++.++|..++...+..+.+...+++ ++... +.+++++...+. +..|++++-.
T Consensus 30 rv~g~dl~~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~~pdiv~vgl 109 (172)
T PF03808_consen 30 RVTGSDLFPDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINASGPDIVFVGL 109 (172)
T ss_pred ccCHHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEEC
Confidence 355778888888877767889999998887777777888888875 44322 223433333332 4567777643
Q ss_pred CCCCccHHHHHHHHhCCCcEEecCCCccceEE
Q 010448 384 RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 415 (510)
Q Consensus 384 ~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~ 415 (510)
-.--.-.-+.+-....-+.+.-.+||.-++..
T Consensus 110 G~PkQE~~~~~~~~~l~~~v~i~vG~~~d~~a 141 (172)
T PF03808_consen 110 GAPKQERWIARHRQRLPAGVIIGVGGAFDFLA 141 (172)
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECchhhhhc
Confidence 22111112233233333336666777666654
No 196
>PLN02534 UDP-glycosyltransferase
Probab=65.75 E-value=1.8e+02 Score=30.60 Aligned_cols=89 Identities=11% Similarity=-0.047 Sum_probs=50.1
Q ss_pred ceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC----ccceE-EcCCceeEecc-ccccC
Q 010448 357 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGS-FSVDC 430 (510)
Q Consensus 357 ~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e~v-~~~~~G~l~~~-~~~~~ 430 (510)
.+...++.+.. .+++..++..+-+. +-.++++||+.+|+|+|+-...+ ....+ +.-+.|+-++. ...+.
T Consensus 345 g~~v~~w~pq~---~iL~h~~v~~fvtH--~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~ 419 (491)
T PLN02534 345 GLLIKGWAPQV---LILSHPAIGGFLTH--CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRW 419 (491)
T ss_pred CeeccCCCCHH---HHhcCCccceEEec--CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccc
Confidence 35444566654 37888888544443 45678999999999999886532 11111 11123333210 00000
Q ss_pred CCCC----ccCHHHHHHHHHHHHH
Q 010448 431 EAVD----PVDVAAVSTTVRRALA 450 (510)
Q Consensus 431 ~~~~----~~d~~~la~~i~~ll~ 450 (510)
..-. -.+.+++++++++++.
T Consensus 420 ~~~~~~~~~v~~eev~~~v~~~m~ 443 (491)
T PLN02534 420 GDEERVGVLVKKDEVEKAVKTLMD 443 (491)
T ss_pred cccccccCccCHHHHHHHHHHHhc
Confidence 0000 1367899999999996
No 197
>PF12996 DUF3880: DUF based on E. rectale Gene description (DUF3880); InterPro: IPR024542 This entry represents proteins of unknown function. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].
Probab=65.52 E-value=11 Score=28.43 Aligned_cols=44 Identities=14% Similarity=0.238 Sum_probs=37.9
Q ss_pred HHHHhccceeecCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCC
Q 010448 211 AGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLT 265 (510)
Q Consensus 211 ~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~ 265 (510)
.....+|.|++.-+...+.+++ .|.. ++..+|-++|+..|.|..
T Consensus 14 ~i~~~~~~iFt~D~~~~~~~~~---~G~~--------~V~yLPLAa~~~~~~p~~ 57 (79)
T PF12996_consen 14 SIANSYDYIFTFDRSFVEEYRN---LGAE--------NVFYLPLAANPERFRPIP 57 (79)
T ss_pred hhCCCCCEEEEECHHHHHHHHH---cCCC--------CEEEccccCCHHHhCccc
Confidence 4466799999999999999997 6655 899999999999998864
No 198
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=64.62 E-value=2.7 Score=44.32 Aligned_cols=24 Identities=21% Similarity=0.286 Sum_probs=20.1
Q ss_pred hhhhhHHHHHHHCCCcEEEEeeCC
Q 010448 4 ASSTKLDSFIQANGHRVMTIAPRY 27 (510)
Q Consensus 4 ~~~~~la~~l~~~Gh~V~vi~p~~ 27 (510)
..+..++++|+++||+||+++|..
T Consensus 14 ~~~~~l~~~L~~rGH~VTvl~~~~ 37 (500)
T PF00201_consen 14 IFMRPLAEELAERGHNVTVLTPSP 37 (500)
T ss_dssp HHHHHHHHHHHHH-TTSEEEHHHH
T ss_pred HHHHHHHHHHHhcCCceEEEEeec
Confidence 356889999999999999999874
No 199
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=63.96 E-value=99 Score=27.27 Aligned_cols=102 Identities=23% Similarity=0.312 Sum_probs=61.8
Q ss_pred ccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCC-ceEE--eccCCHHHHH---HH--HHhCcEEEeC
Q 010448 311 EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARG--VAKFNIPLAH---MI--IAGADFILIP 382 (510)
Q Consensus 311 ~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~-~v~~--~~~~~~~~~~---~~--~~~adv~v~p 382 (510)
...-|.|.+.+.++...+.+.++.++|..++...+..+.+...+++ ++.. .+.+..++.. .. -...|++++.
T Consensus 27 ~r~~g~dl~~~ll~~~~~~~~~v~llG~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~~~~~~i~~~I~~~~pdiv~vg 106 (171)
T cd06533 27 ERVTGSDLMPALLELAAQKGLRVFLLGAKPEVLEKAAERLRARYPGLKIVGYHHGYFGPEEEEEIIERINASGADILFVG 106 (171)
T ss_pred cccCcHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCcEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEE
Confidence 3456889999999888777899999998887777777778888876 4443 2233322221 22 2356877764
Q ss_pred C---CCCCccHHHHHHHHhCCCcEEecCCCccceEE
Q 010448 383 S---RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 415 (510)
Q Consensus 383 s---~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~ 415 (510)
- ..|-|.....+.+ ..++ .-.+||.-++..
T Consensus 107 lG~PkQE~~~~~~~~~l--~~~v-~~~vG~~~d~~a 139 (171)
T cd06533 107 LGAPKQELWIARHKDRL--PVPV-AIGVGGSFDFLA 139 (171)
T ss_pred CCCCHHHHHHHHHHHHC--CCCE-EEEeceeeEecc
Confidence 3 2354444444333 2333 334666555553
No 200
>PLN03015 UDP-glucosyl transferase
Probab=63.04 E-value=1.2e+02 Score=31.67 Aligned_cols=84 Identities=12% Similarity=-0.059 Sum_probs=48.8
Q ss_pred eEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC----ccceE-EcCCceeEeccccccCCC
Q 010448 358 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEA 432 (510)
Q Consensus 358 v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg----~~e~v-~~~~~G~l~~~~~~~~~~ 432 (510)
+....+.++.+ +++...+..+-+. +--++.+||+.+|+|+|+-...+ ....+ +.-+.|+-+..-..
T Consensus 337 l~v~~W~PQ~~---vL~h~~vg~fvtH--~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~---- 407 (470)
T PLN03015 337 LVVTQWAPQVE---ILSHRSIGGFLSH--CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS---- 407 (470)
T ss_pred eEEEecCCHHH---HhccCccCeEEec--CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc----
Confidence 33345556553 5777666554443 33458999999999999876432 12222 22345554310000
Q ss_pred CCccCHHHHHHHHHHHHH
Q 010448 433 VDPVDVAAVSTTVRRALA 450 (510)
Q Consensus 433 ~~~~d~~~la~~i~~ll~ 450 (510)
...-+.++++++|++++.
T Consensus 408 ~~~v~~e~i~~~v~~lm~ 425 (470)
T PLN03015 408 EKVIGREEVASLVRKIVA 425 (470)
T ss_pred CCccCHHHHHHHHHHHHc
Confidence 012467899999999995
No 201
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=59.69 E-value=29 Score=33.55 Aligned_cols=69 Identities=14% Similarity=0.234 Sum_probs=46.0
Q ss_pred HHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcE-EecC--CCccceEEcCCceeEeccccccCCCCCccCHHHHHHH
Q 010448 368 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPI-VAST--GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 444 (510)
Q Consensus 368 ~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv-~s~~--gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~ 444 (510)
...+.|+.|...++|.-..++..-++|||++||..| .++. -.+.+++.=....+.+ +..+..+|-+.
T Consensus 229 ~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v----------~~~~~~~l~~i 298 (302)
T PF03016_consen 229 EYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRV----------PEADLPELPEI 298 (302)
T ss_pred HHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEE----------CHHHHHHHHHH
Confidence 355689999999998877778899999999997555 4442 2344555333444444 66666555554
Q ss_pred HH
Q 010448 445 VR 446 (510)
Q Consensus 445 i~ 446 (510)
|+
T Consensus 299 L~ 300 (302)
T PF03016_consen 299 LR 300 (302)
T ss_pred Hh
Confidence 43
No 202
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=58.07 E-value=9.8 Score=34.55 Aligned_cols=26 Identities=27% Similarity=0.422 Sum_probs=22.1
Q ss_pred chhhhhHHHHHHHCCCcEEEEeeCCC
Q 010448 3 NASSTKLDSFIQANGHRVMTIAPRYD 28 (510)
Q Consensus 3 ~~~~~~la~~l~~~Gh~V~vi~p~~~ 28 (510)
..-+..|+++|++.||+|.|++|...
T Consensus 13 a~Gi~aL~~~L~~~g~~V~VvAP~~~ 38 (196)
T PF01975_consen 13 APGIRALAKALSALGHDVVVVAPDSE 38 (196)
T ss_dssp SHHHHHHHHHHTTTSSEEEEEEESSS
T ss_pred CHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 45578899999888999999999854
No 203
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=57.73 E-value=33 Score=28.34 Aligned_cols=62 Identities=18% Similarity=0.056 Sum_probs=32.9
Q ss_pred hhhhHHHHHHHCCCcEEEEeeCCCCcccccCCcEEEEEEeCCe---E-EEEEEEEEeeCCceEEEE
Q 010448 5 SSTKLDSFIQANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDK---I-EKVRFFHCHKRGVDRVFV 66 (510)
Q Consensus 5 ~~~~la~~l~~~Gh~V~vi~p~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~gv~v~~~ 66 (510)
|+-.|+.+.+++||+|.++++..=.+..+-.......+.+.+. + ..........+.++++++
T Consensus 19 TT~alm~eAq~RGhev~~~~~~dL~~~~g~~~a~~~~v~~~~~~~~~~~~~~~~~~~L~~~Dvvlm 84 (119)
T PF02951_consen 19 TTFALMLEAQRRGHEVFYYEPGDLSLRDGRVWARARPVEVKDDPKDWYKLGEEEEIPLDDFDVVLM 84 (119)
T ss_dssp HHHHHHHHHHHTT-EEEEE-GGGEEEETTEEEEEEEEEEE-S-SS--EEEEEEEEEEGGGSSEEEE
T ss_pred hHHHHHHHHHHCCCEEEEEEcCcEEEECCEEEEEEEEEEEecCCCCcEecCCcEEcccccCCEEEE
Confidence 6677999999999999999886433332222222223333221 1 112223344567777777
No 204
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=56.97 E-value=27 Score=27.85 Aligned_cols=32 Identities=9% Similarity=0.248 Sum_probs=24.6
Q ss_pred CCcEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 010448 329 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 360 (510)
Q Consensus 329 ~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~ 360 (510)
|+.+|+++|+..+.-.+...+++.+++++|..
T Consensus 63 P~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~a 94 (100)
T PF09949_consen 63 PERKFILIGDSGQHDPEIYAEIARRFPGRILA 94 (100)
T ss_pred CCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEE
Confidence 78899999985433366778888899887753
No 205
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=56.79 E-value=2.2e+02 Score=28.86 Aligned_cols=107 Identities=19% Similarity=0.235 Sum_probs=57.9
Q ss_pred CcEEEEEecCChhHHHHHHHHHHHCC--CceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecC
Q 010448 330 NVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 407 (510)
Q Consensus 330 ~~~l~i~G~g~~~~~~~~~~l~~~~~--~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~ 407 (510)
..++...-.+..+.....+.++.... .++.....-..+++...++++|++|-.-. - +++=|++.|+|+|+-.-
T Consensus 238 ~~~i~~~~~~~s~d~~va~~ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R~----H-saI~al~~g~p~i~i~Y 312 (385)
T COG2327 238 LWRITLIDYGASDDLAVADAIAQLVLDSAEILVSSDEYAEELGGILAACDLIVGMRL----H-SAIMALAFGVPAIAIAY 312 (385)
T ss_pred ceEEEeeeccccchhHHHHHHHhhcCCccceEeecchHHHHHHHHhccCceEEeehh----H-HHHHHHhcCCCeEEEee
Confidence 34433333333333444555555444 23333221112455568999999993222 2 35558999999998753
Q ss_pred C----CccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHh
Q 010448 408 G----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 451 (510)
Q Consensus 408 g----g~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~ 451 (510)
. ++.+.+. --++.. -..+.+.+.+.+...+.+..
T Consensus 313 ~~K~~~l~~~~g--l~~~~~--------~i~~~~~~~l~~~~~e~~~~ 350 (385)
T COG2327 313 DPKVRGLMQDLG--LPGFAI--------DIDPLDAEILSAVVLERLTK 350 (385)
T ss_pred cHHHHHHHHHcC--CCcccc--------cCCCCchHHHHHHHHHHHhc
Confidence 2 3322222 223332 12667888888888777765
No 206
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=56.76 E-value=1.3e+02 Score=27.62 Aligned_cols=106 Identities=13% Similarity=0.059 Sum_probs=61.7
Q ss_pred EEEecCccc--ccChhhHHHHHHhhhhCCcEEEEEecCC---hhHHHHHHHHHHHC-CCceEEeccCCHHHHHHHHHhCc
Q 010448 304 IGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGK---KPMEKQLEQLEILY-PEKARGVAKFNIPLAHMIIAGAD 377 (510)
Q Consensus 304 i~~~Grl~~--~Kg~~~li~a~~~l~~~~~~l~i~G~g~---~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~ad 377 (510)
++.-|.... ..+.+.+.+.+..+...+.++.++.... +++...+.+.-..+ +..+......+.++..+.+..+|
T Consensus 3 ~~igg~~~~~~~~~~~~l~~~l~~~~~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~~l~~ad 82 (212)
T cd03146 3 LLTSGGGLGYLAHALPAIDDLLLSLTKARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFDTEDPLDALLEAD 82 (212)
T ss_pred EEEeCCcccccccchHHHHHHHHHhccCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccCcccHHHHHhcCC
Confidence 444444443 3456666666666644578899998754 23444444444455 44344333333344456889999
Q ss_pred EEEeCCC--------CC--CccHHHHHHHHhCCCcEEecCCC
Q 010448 378 FILIPSR--------FE--PCGLIQLHAMRYGTVPIVASTGG 409 (510)
Q Consensus 378 v~v~ps~--------~E--~~g~~~~Eama~G~Pvv~s~~gg 409 (510)
++++|-= +. ++--.+-++...|+|++.+..|.
T Consensus 83 ~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa 124 (212)
T cd03146 83 VIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGS 124 (212)
T ss_pred EEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhH
Confidence 9999851 11 22233455666799988887664
No 207
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=56.42 E-value=1.1e+02 Score=26.75 Aligned_cols=67 Identities=16% Similarity=0.226 Sum_probs=47.0
Q ss_pred hCcEEEeCCCC-CCccHHHHHHHHhCCCcEEecCCCcc----ceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHH
Q 010448 375 GADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLV----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 449 (510)
Q Consensus 375 ~adv~v~ps~~-E~~g~~~~Eama~G~Pvv~s~~gg~~----e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll 449 (510)
..|++++-... +.-|..+++.+....|+|+....... +.+..|..|++. .|.+.+++.++|..++
T Consensus 47 ~~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~~~~~~~~~~~~~~ga~~~i~----------kp~~~~~l~~~i~~~~ 116 (196)
T PRK10360 47 GVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLS----------KRCSPDELIAAVHTVA 116 (196)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHccCCCEEEEECCCCHHHHHHHHHcCCcEEEE----------CCCCHHHHHHHHHHHH
Confidence 46888876544 45677788877777888765432222 234457788887 8899999999999887
Q ss_pred Hh
Q 010448 450 AT 451 (510)
Q Consensus 450 ~~ 451 (510)
..
T Consensus 117 ~~ 118 (196)
T PRK10360 117 TG 118 (196)
T ss_pred cC
Confidence 53
No 208
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=54.88 E-value=1.7e+02 Score=30.61 Aligned_cols=131 Identities=11% Similarity=-0.023 Sum_probs=68.6
Q ss_pred CcEEEEecCcc-----cccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHC----CCceEEeccCCHHHHHH
Q 010448 301 IPVIGFIGRLE-----EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY----PEKARGVAKFNIPLAHM 371 (510)
Q Consensus 301 ~~~i~~~Grl~-----~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~----~~~v~~~~~~~~~~~~~ 371 (510)
..+++..|.+. +.+-...+..+++.+ +++.|++.=.+.+... ..... .++|....+.++.++-
T Consensus 278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~--~~~~FiW~~~~~~~~~-----~~~~~~~~~~~nV~~~~W~PQ~~ll- 349 (496)
T KOG1192|consen 278 SVVYISFGSMVNSADLPEEQKKELAKALESL--QGVTFLWKYRPDDSIY-----FPEGLPNRGRGNVVLSKWAPQNDLL- 349 (496)
T ss_pred CeEEEECCcccccccCCHHHHHHHHHHHHhC--CCceEEEEecCCcchh-----hhhcCCCCCcCceEEecCCCcHHHh-
Confidence 35666677765 344456666777666 4777666554431111 22222 2357666677766531
Q ss_pred HHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEec-CC---CccceEE-cCCceeEeccccccCCCCCccCHHHHHHHHH
Q 010448 372 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TG---GLVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 446 (510)
Q Consensus 372 ~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~-~g---g~~e~v~-~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~ 446 (510)
+....+..+-+. -|++ +++|++.+|+|+|+.. .| -....+. ++..+.+.. .+..+.. +.+++.
T Consensus 350 -l~H~~v~~FvTH-gG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~--------~~~~~~~-~~~~~~ 417 (496)
T KOG1192|consen 350 -LDHPAVGGFVTH-GGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDK--------RDLVSEE-LLEAIK 417 (496)
T ss_pred -cCCCcCcEEEEC-Cccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEeh--------hhcCcHH-HHHHHH
Confidence 222223332232 1233 4599999999999543 22 2233333 344444431 1223334 788888
Q ss_pred HHHHh
Q 010448 447 RALAT 451 (510)
Q Consensus 447 ~ll~~ 451 (510)
.++++
T Consensus 418 ~il~~ 422 (496)
T KOG1192|consen 418 EILEN 422 (496)
T ss_pred HHHcC
Confidence 88876
No 209
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=53.53 E-value=1.7e+02 Score=27.19 Aligned_cols=90 Identities=10% Similarity=0.105 Sum_probs=49.1
Q ss_pred ccChhhHHHHHHhhhhC--CcEEEEEecCC-hhHHHHHHHH---HHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCC
Q 010448 313 QKGSDILAAAIPHFIKE--NVQIIVLGTGK-KPMEKQLEQL---EILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFE 386 (510)
Q Consensus 313 ~Kg~~~li~a~~~l~~~--~~~l~i~G~g~-~~~~~~~~~l---~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E 386 (510)
..-.+.+.+.+..+.+. .+.++.....+ .......... ..............+..+...+++.+|++|.....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Is~RlH- 267 (286)
T PF04230_consen 189 EEYIEEIAELIQRLLDKGYKIVLLPFSPSDDDEDDDDFNEIDIKAEKFFNVIIIDYSLSPDELLELISQADLVISMRLH- 267 (286)
T ss_pred hhHHHHHHHHHHHhhcccceeEEEEeeeccchhhHHHHHhhhhhcccccceeEecCCCCHHHHHHHHhcCCEEEecCCH-
Confidence 33455666666666553 33333333322 1122222221 11111222333344667777899999999965543
Q ss_pred CccHHHHHHHHhCCCcEEecC
Q 010448 387 PCGLIQLHAMRYGTVPIVAST 407 (510)
Q Consensus 387 ~~g~~~~Eama~G~Pvv~s~~ 407 (510)
..+-|+++|+|+|+-..
T Consensus 268 ----~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 268 ----GAILALSLGVPVIAISY 284 (286)
T ss_pred ----HHHHHHHcCCCEEEEec
Confidence 34558999999998653
No 210
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=53.05 E-value=2.1e+02 Score=27.32 Aligned_cols=102 Identities=13% Similarity=0.067 Sum_probs=65.0
Q ss_pred EEEEecCcccccChhhHHHHHHhhhhCCcEEEEEec-----------CC-hhHHHHHHHHHHHCCCceEEeccCCHHHHH
Q 010448 303 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT-----------GK-KPMEKQLEQLEILYPEKARGVAKFNIPLAH 370 (510)
Q Consensus 303 ~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~-----------g~-~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~ 370 (510)
.++.+|- ......+.+++.+++|++-..+++..|. |. ++-.+.+++...+.+..+. ...++...+.
T Consensus 28 ~~~iaGP-Csie~~~~~~~~A~~lk~~g~~~~r~~~~kpRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~-te~~d~~~~~ 105 (266)
T PRK13398 28 KIIIAGP-CAVESEEQMVKVAEKLKELGVHMLRGGAFKPRTSPYSFQGLGEEGLKILKEVGDKYNLPVV-TEVMDTRDVE 105 (266)
T ss_pred EEEEEeC-CcCCCHHHHHHHHHHHHHcCCCEEEEeeecCCCCCCccCCcHHHHHHHHHHHHHHcCCCEE-EeeCChhhHH
Confidence 4444444 3445678899999999887778888882 11 2233456666667664333 2345556665
Q ss_pred HHHHhCcEEEeCCCC-CCccHHHHHHHHhCCCcEEecC
Q 010448 371 MIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVAST 407 (510)
Q Consensus 371 ~~~~~adv~v~ps~~-E~~g~~~~Eama~G~Pvv~s~~ 407 (510)
.+...+|++-.+|+. +.++ -+-++-..|+||+.++.
T Consensus 106 ~l~~~vd~~kIga~~~~n~~-LL~~~a~~gkPV~lk~G 142 (266)
T PRK13398 106 EVADYADMLQIGSRNMQNFE-LLKEVGKTKKPILLKRG 142 (266)
T ss_pred HHHHhCCEEEECcccccCHH-HHHHHhcCCCcEEEeCC
Confidence 566669999999986 4433 23344567999998874
No 211
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=50.08 E-value=86 Score=27.91 Aligned_cols=98 Identities=17% Similarity=0.212 Sum_probs=59.3
Q ss_pred ChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCC-ceEEe-ccCCHHHHHHH-----HHhCcEEEeCC---C
Q 010448 315 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGV-AKFNIPLAHMI-----IAGADFILIPS---R 384 (510)
Q Consensus 315 g~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~-~v~~~-~~~~~~~~~~~-----~~~adv~v~ps---~ 384 (510)
|.|++.+.++...+.+.++.++|..++..++..+.+..++++ ++... +.+.+++..++ -+.+|++++.- +
T Consensus 33 G~dl~~~l~~~~~~~~~~vfllG~~~~v~~~~~~~l~~~yP~l~i~g~~g~f~~~~~~~i~~~I~~s~~dil~VglG~Pk 112 (177)
T TIGR00696 33 GPDLMEELCQRAGKEKLPIFLYGGKPDVLQQLKVKLIKEYPKLKIVGAFGPLEPEERKAALAKIARSGAGIVFVGLGCPK 112 (177)
T ss_pred hHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHHcCCCEEEEEcCCcH
Confidence 888888888887667889999999888788888888888876 44443 34443322222 23567777643 2
Q ss_pred CCCccHHHHHHHHhCCCcEEecCCCccceEE
Q 010448 385 FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 415 (510)
Q Consensus 385 ~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~ 415 (510)
.|-|-.... .....+ +.-.+||.-++..
T Consensus 113 QE~~~~~~~--~~~~~~-v~~gvGg~fd~~a 140 (177)
T TIGR00696 113 QEIWMRNHR--HLKPDA-VMIGVGGSFDVFS 140 (177)
T ss_pred hHHHHHHhH--HhCCCc-EEEEeceeeeecc
Confidence 233322211 112333 3334777666654
No 212
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=49.76 E-value=50 Score=31.36 Aligned_cols=42 Identities=19% Similarity=0.124 Sum_probs=30.2
Q ss_pred HHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCc
Q 010448 369 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL 410 (510)
Q Consensus 369 ~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~ 410 (510)
+.+++..+|+++.-+..+...-.+..|+..|+|+|+..+|..
T Consensus 54 l~~ll~~~DvVid~t~p~~~~~~~~~al~~G~~vvigttG~s 95 (257)
T PRK00048 54 LEAVLADADVLIDFTTPEATLENLEFALEHGKPLVIGTTGFT 95 (257)
T ss_pred HHHhccCCCEEEECCCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 344667899999777555555567789999999998755443
No 213
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=49.05 E-value=13 Score=37.75 Aligned_cols=20 Identities=25% Similarity=0.257 Sum_probs=18.0
Q ss_pred hhHHHHHHHCCCcEEEEeeC
Q 010448 7 TKLDSFIQANGHRVMTIAPR 26 (510)
Q Consensus 7 ~~la~~l~~~Gh~V~vi~p~ 26 (510)
-.||++|+++||+|+++++.
T Consensus 13 l~lA~~L~~~Gh~V~~~~~~ 32 (392)
T TIGR01426 13 LGVVEELVARGHRVTYATTE 32 (392)
T ss_pred HHHHHHHHhCCCeEEEEeCH
Confidence 36899999999999999975
No 214
>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=48.99 E-value=55 Score=31.32 Aligned_cols=111 Identities=9% Similarity=0.004 Sum_probs=67.1
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCccccc-ChhhHHHHHHhhhhCCcEEEEEecCC-hhHHHHHHHHHHH-------CCC
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQK-GSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEIL-------YPE 356 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~K-g~~~li~a~~~l~~~~~~l~i~G~g~-~~~~~~~~~l~~~-------~~~ 356 (510)
.+.+++++|+++.-+. . ++-+...+ .+...|+.+++..+ .+-+++.+.-. ..+.+.+..-... .+.
T Consensus 164 ~~~l~~rlgv~ek~~~-~---~slFaY~npa~~s~ieq~r~a~~-p~llL~~e~~~~~~~~~~~~~~~~a~Gdv~~~~~l 238 (370)
T COG4394 164 AEYLLERLGVNEKYDL-I---ASLFAYENPALPSWIEQLRKADK-PILLLIPEGKTQANFAKYFDNNNNADGDVFQTAKL 238 (370)
T ss_pred HHHHHHHcCCchhhch-h---hhhhccCCcchHHHHHHHHhcCC-CEEEEcccchHHHHHHHHcCCCcccccchhcccce
Confidence 4578999999754332 2 34444444 67777877777643 45555554322 1122211111111 123
Q ss_pred ceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEec
Q 010448 357 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 406 (510)
Q Consensus 357 ~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~ 406 (510)
++.....++.++..+++..||+-++-- -=+.+-|..+|+|.+=.-
T Consensus 239 rvvklPFvpqddyd~LL~lcD~n~VRG-----EDSFVRAq~agkPflWHI 283 (370)
T COG4394 239 RVVKLPFVPQDDYDELLWLCDFNLVRG-----EDSFVRAQLAGKPFLWHI 283 (370)
T ss_pred EEEEecCCcHhHHHHHHHhcccceeec-----chHHHHHHHcCCCcEEEe
Confidence 455666678899999999999987532 235788999999998654
No 215
>cd00027 BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/hetero BRCT multimers, BRCT-non-BRCT interactions, and interactions within DNA strand breaks.
Probab=48.49 E-value=73 Score=22.19 Aligned_cols=64 Identities=14% Similarity=0.198 Sum_probs=41.5
Q ss_pred cEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEec
Q 010448 331 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 406 (510)
Q Consensus 331 ~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~ 406 (510)
..|.+.|.-+......++++...+++.+.... + ..++.+|.+...... ....|...|+|+|...
T Consensus 2 ~~~~i~g~~~~~~~~~l~~~i~~~Gg~v~~~~--~--------~~~thvI~~~~~~~~--~~~~~~~~~~~iV~~~ 65 (72)
T cd00027 2 LTFVITGDLPSEERDELKELIEKLGGKVTSSV--S--------KKTTHVIVGSDAGPK--KLLKAIKLGIPIVTPE 65 (72)
T ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCEEeccc--c--------CCceEEEECCCCCch--HHHHHHHcCCeEecHH
Confidence 56788886423356778888888887554322 1 466777776544222 2778888999888654
No 216
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=48.24 E-value=2.3e+02 Score=26.65 Aligned_cols=98 Identities=16% Similarity=0.186 Sum_probs=58.1
Q ss_pred ChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEE--eccCCHHHHHH---H--HHhCcEEEeCC---C
Q 010448 315 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG--VAKFNIPLAHM---I--IAGADFILIPS---R 384 (510)
Q Consensus 315 g~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~--~~~~~~~~~~~---~--~~~adv~v~ps---~ 384 (510)
|.|++.+.++...+.+.++.++|..++..++..+.+..+++.++.. .+.+..++... - -+.+|++++.- +
T Consensus 90 G~dl~~~ll~~~~~~~~~v~llG~~~~v~~~a~~~l~~~y~l~i~g~~~Gyf~~~e~~~i~~~I~~s~~dil~VglG~Pk 169 (243)
T PRK03692 90 GADLWEALMARAGKEGTPVFLVGGKPEVLAQTEAKLRTQWNVNIVGSQDGYFTPEQRQALFERIHASGAKIVTVAMGSPK 169 (243)
T ss_pred hHHHHHHHHHHHHhcCCeEEEECCCHHHHHHHHHHHHHHhCCEEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEECCCcH
Confidence 8899888888776667899999988876777777777776444432 34443333222 2 34568877643 2
Q ss_pred CCCccHHHHHHHHhCCCcEEecCCCccceEE
Q 010448 385 FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 415 (510)
Q Consensus 385 ~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~ 415 (510)
.|-|-....+- .+.++ .-.+||.-|++.
T Consensus 170 QE~~~~~~~~~--~~~~v-~~gvGg~fD~~a 197 (243)
T PRK03692 170 QEIFMRDCRLV--YPDAL-YMGVGGTYDVFT 197 (243)
T ss_pred HHHHHHHHHHh--CCCCE-EEEeCeEEEEec
Confidence 35443333222 23444 345777666554
No 217
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=47.25 E-value=2.5e+02 Score=28.06 Aligned_cols=103 Identities=12% Similarity=0.046 Sum_probs=67.4
Q ss_pred cEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCC------------hhHHHHHHHHHHHCCCceEEeccCCHHHH
Q 010448 302 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK------------KPMEKQLEQLEILYPEKARGVAKFNIPLA 369 (510)
Q Consensus 302 ~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~------------~~~~~~~~~l~~~~~~~v~~~~~~~~~~~ 369 (510)
+.++.+| -.....-+.+++.++.+++-.++++-.|.-. ++-.+.+.+...+.+..+. ...++.+.+
T Consensus 101 ~l~vIAG-PCsIEs~eq~l~~A~~lk~~g~~~~r~g~~kpRtsp~sf~G~g~~gl~~L~~~~~e~Gl~~~-tev~d~~~v 178 (352)
T PRK13396 101 PVVVVAG-PCSVENEEMIVETAKRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAAREATGLGII-TEVMDAADL 178 (352)
T ss_pred eEEEEEe-CCcccCHHHHHHHHHHHHHcCCCEEEeeeecCCCCCcccCCchHHHHHHHHHHHHHcCCcEE-EeeCCHHHH
Confidence 4556666 3445566788999988887677777765311 2334556666667764343 344566666
Q ss_pred HHHHHhCcEEEeCCCC-CCccHHHHHHHHhCCCcEEecC
Q 010448 370 HMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVAST 407 (510)
Q Consensus 370 ~~~~~~adv~v~ps~~-E~~g~~~~Eama~G~Pvv~s~~ 407 (510)
..+...+|++-.+|+. ..+.+ +-++-..|+||+.+..
T Consensus 179 ~~~~~~~d~lqIga~~~~n~~L-L~~va~t~kPVllk~G 216 (352)
T PRK13396 179 EKIAEVADVIQVGARNMQNFSL-LKKVGAQDKPVLLKRG 216 (352)
T ss_pred HHHHhhCCeEEECcccccCHHH-HHHHHccCCeEEEeCC
Confidence 6666779999999976 55554 3344467999998874
No 218
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=46.90 E-value=53 Score=27.39 Aligned_cols=68 Identities=18% Similarity=0.043 Sum_probs=40.9
Q ss_pred HHHHhCcEEEeCCCCCC--ccHH---HHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHH
Q 010448 371 MIIAGADFILIPSRFEP--CGLI---QLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 445 (510)
Q Consensus 371 ~~~~~adv~v~ps~~E~--~g~~---~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i 445 (510)
.++..||++|.--- |- .-++ .--|.|.|+|.|.-....+..-+++-...-++ -..+++...+.|
T Consensus 68 ~li~~aDvVVvrFG-ekYKQWNaAfDAg~a~AlgKplI~lh~~~~~HpLKEvda~A~a----------~~et~~Qvv~iL 136 (141)
T PF11071_consen 68 TLIEKADVVVVRFG-EKYKQWNAAFDAGYAAALGKPLITLHPEELHHPLKEVDAAALA----------VAETPEQVVEIL 136 (141)
T ss_pred HHHhhCCEEEEEec-hHHHHHHHHhhHHHHHHcCCCeEEecchhccccHHHHhHhhHh----------hhCCHHHHHHHH
Confidence 48999999986321 11 1122 23467899999998866655555442222222 346777777777
Q ss_pred HHHH
Q 010448 446 RRAL 449 (510)
Q Consensus 446 ~~ll 449 (510)
..++
T Consensus 137 ~Yv~ 140 (141)
T PF11071_consen 137 RYVL 140 (141)
T ss_pred HHHh
Confidence 6654
No 219
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=46.31 E-value=2.9e+02 Score=26.95 Aligned_cols=135 Identities=19% Similarity=0.133 Sum_probs=77.6
Q ss_pred HHHHHhccceeec--CHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHH
Q 010448 210 KAGILESDMVLTV--SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 287 (510)
Q Consensus 210 ~~~~~~ad~vi~v--S~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (510)
+-.-+.+|.|+.= ++...+.+.+. ..+-|| |+-+-....|... -.+--
T Consensus 90 ~vls~y~D~iviR~~~~~~~~~~a~~-------------s~vPVI-Na~~g~~~HPtQ~----------------LaDl~ 139 (301)
T TIGR00670 90 KTLSGYSDAIVIRHPLEGAARLAAEV-------------SEVPVI-NAGDGSNQHPTQT----------------LLDLY 139 (301)
T ss_pred HHHHHhCCEEEEECCchhHHHHHHhh-------------CCCCEE-eCCCCCCCCcHHH----------------HHHHH
Confidence 4445568887763 34445555431 134444 6665444566321 12233
Q ss_pred HHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHH
Q 010448 288 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 367 (510)
Q Consensus 288 ~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~ 367 (510)
.+++++|-- +...|.|+|-+...+=...++.++..+ ++.+.++++..-+..+.+.+.+.+.+..+... +
T Consensus 140 Ti~e~~g~l---~g~~va~vGD~~~~~v~~Sl~~~~a~~---g~~v~~~~P~~~~~~~~~~~~~~~~G~~v~~~-----~ 208 (301)
T TIGR00670 140 TIYEEFGRL---DGLKIALVGDLKYGRTVHSLAEALTRF---GVEVYLISPEELRMPKEILEELKAKGIKVRET-----E 208 (301)
T ss_pred HHHHHhCCC---CCCEEEEEccCCCCcHHHHHHHHHHHc---CCEEEEECCccccCCHHHHHHHHHcCCEEEEE-----C
Confidence 456667732 337999999765556577778888776 78999999643112223333444444334322 2
Q ss_pred HHHHHHHhCcEEEeCCCC
Q 010448 368 LAHMIIAGADFILIPSRF 385 (510)
Q Consensus 368 ~~~~~~~~adv~v~ps~~ 385 (510)
++.+.++.+|++...+..
T Consensus 209 d~~~a~~~aDvvyt~~~~ 226 (301)
T TIGR00670 209 SLEEVIDEADVLYVTRIQ 226 (301)
T ss_pred CHHHHhCCCCEEEECCcc
Confidence 334578999999887643
No 220
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=46.14 E-value=64 Score=31.64 Aligned_cols=19 Identities=16% Similarity=0.153 Sum_probs=15.5
Q ss_pred hhHHHHHHHCCCcEEEEeeC
Q 010448 7 TKLDSFIQANGHRVMTIAPR 26 (510)
Q Consensus 7 ~~la~~l~~~Gh~V~vi~p~ 26 (510)
-.++++|++ ||+|.+++..
T Consensus 18 ~ala~~L~~-g~ev~~~~~~ 36 (321)
T TIGR00661 18 VAIGEALKN-DYEVSYIASG 36 (321)
T ss_pred HHHHHHHhC-CCeEEEEEcC
Confidence 457889999 9999999743
No 221
>TIGR03646 YtoQ_fam YtoQ family protein. Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=44.15 E-value=65 Score=26.91 Aligned_cols=68 Identities=18% Similarity=0.041 Sum_probs=37.7
Q ss_pred HHHHhCcEEEeCCCCCC--ccHH---HHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHH
Q 010448 371 MIIAGADFILIPSRFEP--CGLI---QLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 445 (510)
Q Consensus 371 ~~~~~adv~v~ps~~E~--~g~~---~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i 445 (510)
.++..||++|.--- |- .-++ .--|.|.|+|.|.-....+..-+++-...-+. -.++++...+.|
T Consensus 71 ~li~~aDvvVvrFG-ekYKQWNaAfDAg~aaAlgKplI~lh~~~~~HpLKEvdaaA~a----------vaetp~Qvv~iL 139 (144)
T TIGR03646 71 KLIEKADVVIALFG-EKYKQWNAAFDAGYAAALGKPLIILRPEELIHPLKEVDNKAQA----------VVETPEQAIETL 139 (144)
T ss_pred HHHhhCCEEEEEec-hHHHHHHHHhhHHHHHHcCCCeEEecchhccccHHHHhHHHHH----------HhcCHHHHHHHH
Confidence 48999999986321 11 1122 23367899999988765554444432211111 235666666665
Q ss_pred HHHH
Q 010448 446 RRAL 449 (510)
Q Consensus 446 ~~ll 449 (510)
..++
T Consensus 140 ~Yv~ 143 (144)
T TIGR03646 140 KYIL 143 (144)
T ss_pred HHhh
Confidence 5543
No 222
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=42.97 E-value=1.1e+02 Score=27.58 Aligned_cols=32 Identities=13% Similarity=0.027 Sum_probs=23.3
Q ss_pred HhCcEEEeCCCCCCccHHHHHHHHhCCCcEEec
Q 010448 374 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 406 (510)
Q Consensus 374 ~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~ 406 (510)
..=|++++..-. .-..++.||..+|+|+|+--
T Consensus 126 ~~Pdlviv~~~~-~~~~ai~Ea~~l~IP~I~i~ 157 (193)
T cd01425 126 RLPDLVIVLDPR-KEHQAIREASKLGIPVIAIV 157 (193)
T ss_pred cCCCEEEEeCCc-cchHHHHHHHHcCCCEEEEe
Confidence 345666665433 23778999999999999874
No 223
>PRK03094 hypothetical protein; Provisional
Probab=41.30 E-value=22 Score=26.95 Aligned_cols=22 Identities=18% Similarity=0.324 Sum_probs=18.5
Q ss_pred chhhhhHHHHHHHCCCcEEEEe
Q 010448 3 NASSTKLDSFIQANGHRVMTIA 24 (510)
Q Consensus 3 ~~~~~~la~~l~~~Gh~V~vi~ 24 (510)
+.+.+.+.++|+++||+|.=+.
T Consensus 7 E~~Ls~i~~~L~~~GYeVv~l~ 28 (80)
T PRK03094 7 EQSLTDVQQALKQKGYEVVQLR 28 (80)
T ss_pred ecCcHHHHHHHHHCCCEEEecC
Confidence 3467889999999999998664
No 224
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=41.25 E-value=1.4e+02 Score=26.41 Aligned_cols=70 Identities=16% Similarity=0.206 Sum_probs=41.9
Q ss_pred CCCeEEEeccchhhhHHHHHHHhhcCCCCCCCCcEEEEecCCCcccccCccchhhcCCChhhhcccccccCCCCCCCCCc
Q 010448 126 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 205 (510)
Q Consensus 126 ~pD~iih~h~~~~~~~~~~l~~~~~~~~~~~~~~~V~tiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (510)
+|| +|.++...+.+...++.+..+..+. .++|+||..-- .+...
T Consensus 92 rPd-vii~nGpg~~vp~~~~~~l~~~~~~-~~~kiIyIES~----aRv~~------------------------------ 135 (170)
T PF08660_consen 92 RPD-VIISNGPGTCVPVCLAAKLLRLLGL-RGSKIIYIESF----ARVKT------------------------------ 135 (170)
T ss_pred CCC-EEEEcCCceeeHHHHHHHHHHHhhc-cCCcEEEEEee----eecCC------------------------------
Confidence 599 8888877766655555554322222 38888886431 11100
Q ss_pred chHH-HHHHHhccceeecCHHHHHHHh
Q 010448 206 INWM-KAGILESDMVLTVSPHYAQELV 231 (510)
Q Consensus 206 ~~~~-~~~~~~ad~vi~vS~~~~~~l~ 231 (510)
..+. +.++.-||.+++.-+.+++...
T Consensus 136 lSlTGklly~~aD~f~VQW~~l~~~yp 162 (170)
T PF08660_consen 136 LSLTGKLLYPFADRFIVQWEELAEKYP 162 (170)
T ss_pred CchHHHHHHHhCCEEEEcCHHHHhHCC
Confidence 0111 3445679999999998888653
No 225
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=40.27 E-value=1.6e+02 Score=25.96 Aligned_cols=78 Identities=17% Similarity=0.233 Sum_probs=41.1
Q ss_pred CcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHH------------HHHHHHHhCcEEEeC--CCCCC---ccHHH
Q 010448 330 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP------------LAHMIIAGADFILIP--SRFEP---CGLIQ 392 (510)
Q Consensus 330 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~------------~~~~~~~~adv~v~p--s~~E~---~g~~~ 392 (510)
+-++-|+|-|. +-+.+.++...++-+|..+-..... .+.++++.||++++. ...++ ++-..
T Consensus 36 g~tvgIiG~G~--IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~li~~~~ 113 (178)
T PF02826_consen 36 GKTVGIIGYGR--IGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRGLINAEF 113 (178)
T ss_dssp TSEEEEESTSH--HHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTTSBSHHH
T ss_pred CCEEEEEEEcC--CcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccceeeeeee
Confidence 34455555554 4444444444444444443333322 233689999998864 33344 56678
Q ss_pred HHHHHhCCCcEEecCCC
Q 010448 393 LHAMRYGTVPIVASTGG 409 (510)
Q Consensus 393 ~Eama~G~Pvv~s~~gg 409 (510)
++.|--|.-+|-+.-|+
T Consensus 114 l~~mk~ga~lvN~aRG~ 130 (178)
T PF02826_consen 114 LAKMKPGAVLVNVARGE 130 (178)
T ss_dssp HHTSTTTEEEEESSSGG
T ss_pred eeccccceEEEeccchh
Confidence 88887777555555444
No 226
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=39.87 E-value=53 Score=28.63 Aligned_cols=37 Identities=24% Similarity=0.266 Sum_probs=27.4
Q ss_pred HHHHhCcEEEeCCCC----CCccH--HHHHHHHhCCCcEEecC
Q 010448 371 MIIAGADFILIPSRF----EPCGL--IQLHAMRYGTVPIVAST 407 (510)
Q Consensus 371 ~~~~~adv~v~ps~~----E~~g~--~~~Eama~G~Pvv~s~~ 407 (510)
.+-..+|++|+.-+- |+-|+ .+.+|++.|+||++.-.
T Consensus 89 al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~ 131 (159)
T PF10649_consen 89 ALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVP 131 (159)
T ss_pred HHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEEC
Confidence 355568999987642 45555 58999999999998743
No 227
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=39.65 E-value=2.9e+02 Score=24.93 Aligned_cols=110 Identities=7% Similarity=0.010 Sum_probs=62.3
Q ss_pred CcEEEEEecCChhHHHHHHHHHHHCCC-ceEEeccCCHHHHHHHHH--hCcEEEeCCCCCC----ccHHHHHHHH---hC
Q 010448 330 NVQIIVLGTGKKPMEKQLEQLEILYPE-KARGVAKFNIPLAHMIIA--GADFILIPSRFEP----CGLIQLHAMR---YG 399 (510)
Q Consensus 330 ~~~l~i~G~g~~~~~~~~~~l~~~~~~-~v~~~~~~~~~~~~~~~~--~adv~v~ps~~E~----~g~~~~Eama---~G 399 (510)
+++++|+.+.+ .....++......+. .+... .-+.++....+. ..|++++-....+ .|..+++.+. .+
T Consensus 3 ~~~Ilivdd~~-~~~~~l~~~L~~~~~~~~v~~-~~~~~~~~~~~~~~~~DlvllD~~l~~~~~~~g~~~~~~l~~~~~~ 80 (216)
T PRK10840 3 NMNVIIADDHP-IVLFGIRKSLEQIEWVNVVGE-FEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPS 80 (216)
T ss_pred ceEEEEECCcH-HHHHHHHHHHhcCCCCEEEEE-ECCHHHHHHHHHhCCCCEEEEeCcCCCCCCCCHHHHHHHHHHHCCC
Confidence 35666776654 233444444443332 12221 123333333333 4688888654432 5777777664 34
Q ss_pred CCcEEecCCCc----cceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHh
Q 010448 400 TVPIVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 451 (510)
Q Consensus 400 ~Pvv~s~~gg~----~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~ 451 (510)
+|+|+-....- .+.+..|..||+. .+.+++++.++|..+++.
T Consensus 81 ~~iIvls~~~~~~~~~~a~~~Ga~~yl~----------K~~~~~~l~~ai~~v~~g 126 (216)
T PRK10840 81 LSIIVLTMNNNPAILSAVLDLDIEGIVL----------KQGAPTDLPKALAALQKG 126 (216)
T ss_pred CcEEEEEecCCHHHHHHHHHCCCeEEEE----------CCCCHHHHHHHHHHHHCC
Confidence 56665432222 2345668899988 888999999999988764
No 228
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=38.76 E-value=1.1e+02 Score=26.81 Aligned_cols=65 Identities=8% Similarity=0.071 Sum_probs=42.0
Q ss_pred ChhhHHHHHHhhhhC--CcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCC
Q 010448 315 GSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPS 383 (510)
Q Consensus 315 g~~~li~a~~~l~~~--~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps 383 (510)
.+.+.++|++.+..+ |.-+++-|+++ +...++.+.+. +.+|...+ ........+.++||-|+.-.
T Consensus 90 Dv~laIDame~~~~~~iD~~vLvSgD~D--F~~Lv~~lre~-G~~V~v~g-~~~~ts~~L~~acd~FI~L~ 156 (160)
T TIGR00288 90 DVRMAVEAMELIYNPNIDAVALVTRDAD--FLPVINKAKEN-GKETIVIG-AEPGFSTALQNSADIAIILG 156 (160)
T ss_pred cHHHHHHHHHHhccCCCCEEEEEeccHh--HHHHHHHHHHC-CCEEEEEe-CCCCChHHHHHhcCeEEeCC
Confidence 377888998887555 44455555555 77777666554 55676665 33334446899999888543
No 229
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=38.41 E-value=2e+02 Score=25.30 Aligned_cols=54 Identities=13% Similarity=0.131 Sum_probs=33.5
Q ss_pred CCcEEEEEecCChhH-HHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCC
Q 010448 329 ENVQIIVLGTGKKPM-EKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF 385 (510)
Q Consensus 329 ~~~~l~i~G~g~~~~-~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~ 385 (510)
.+-+++|+|.|. + ...+.....+.+.++....... +++...+..+|+++...-.
T Consensus 43 ~gk~vlViG~G~--~~G~~~a~~L~~~g~~V~v~~r~~-~~l~~~l~~aDiVIsat~~ 97 (168)
T cd01080 43 AGKKVVVVGRSN--IVGKPLAALLLNRNATVTVCHSKT-KNLKEHTKQADIVIVAVGK 97 (168)
T ss_pred CCCEEEEECCcH--HHHHHHHHHHhhCCCEEEEEECCc-hhHHHHHhhCCEEEEcCCC
Confidence 467899999986 3 2323333333333454444433 4455799999999988754
No 230
>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
Probab=37.88 E-value=1.6e+02 Score=27.94 Aligned_cols=123 Identities=11% Similarity=0.124 Sum_probs=65.5
Q ss_pred EEEEecCcccccChhhHHHHHHhhhhCC--cEEEEEecCCh---------hHHHHHHHHHHHCCCceEEeccCCHHHHHH
Q 010448 303 VIGFIGRLEEQKGSDILAAAIPHFIKEN--VQIIVLGTGKK---------PMEKQLEQLEILYPEKARGVAKFNIPLAHM 371 (510)
Q Consensus 303 ~i~~~Grl~~~Kg~~~li~a~~~l~~~~--~~l~i~G~g~~---------~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~ 371 (510)
+-+|+|.-.+.+-+..+.+++....+-. +-+.+...|+. +.-....+++.+++-.++.. .+++
T Consensus 116 ~~Vy~Gse~e~~~i~~~~~v~~~a~~~Gmp~v~~~YpRg~~~~~~~~~d~~~v~~aaRlaaelGADIiK~-~ytg----- 189 (265)
T COG1830 116 ATVYVGSETEREMIENISQVVEDAHELGMPLVAWAYPRGPAIKDEYHRDADLVGYAARLAAELGADIIKT-KYTG----- 189 (265)
T ss_pred EEEecCCcchHHHHHHHHHHHHHHHHcCCceEEEEeccCCcccccccccHHHHHHHHHHHHHhcCCeEee-cCCC-----
Confidence 6778999888888888888888776633 33333443331 12233344444544333221 1221
Q ss_pred HHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCc----------cceEEcCCceeEeccccccCCCCCccCHHHH
Q 010448 372 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----------VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 441 (510)
Q Consensus 372 ~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~----------~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~l 441 (510)
..|.|-.++ -+||+|||.+-.+-. .+.++.|..|..+|. ..+..++++.|
T Consensus 190 ------------~~e~F~~vv---~~~~vpVviaGG~k~~~~~~~l~~~~~ai~aGa~G~~~GR-----NifQ~~~p~~m 249 (265)
T COG1830 190 ------------DPESFRRVV---AACGVPVVIAGGPKTETEREFLEMVTAAIEAGAMGVAVGR-----NIFQHEDPEAM 249 (265)
T ss_pred ------------ChHHHHHHH---HhCCCCEEEeCCCCCCChHHHHHHHHHHHHccCcchhhhh-----hhhccCChHHH
Confidence 113333332 256777777642221 112334555655541 01256778888
Q ss_pred HHHHHHHHHh
Q 010448 442 STTVRRALAT 451 (510)
Q Consensus 442 a~~i~~ll~~ 451 (510)
..+|..+..+
T Consensus 250 ~~Ai~~Ivhe 259 (265)
T COG1830 250 VKAIQAIVHE 259 (265)
T ss_pred HHHHHHHhcC
Confidence 8888877765
No 231
>TIGR03837 efp_adjacent_2 conserved hypothetical protein, PP_1857 family. This model describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=37.64 E-value=2.5e+02 Score=28.20 Aligned_cols=112 Identities=13% Similarity=0.054 Sum_probs=66.7
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCC-hhHHHHHHH--H----HHHCCC-c
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQ--L----EILYPE-K 357 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~-~~~~~~~~~--l----~~~~~~-~ 357 (510)
+..+.+++|++..++..+|...+- +.-.+..+++++.... ..++++|..+-. ......+.. + ....+. .
T Consensus 167 ~~~~~~~lg~~~~~~~~~vSLF~Y--e~~al~~ll~~~~~~~-~pv~lLvp~Gr~~~~v~~~l~~~~~~~g~~~~~g~L~ 243 (371)
T TIGR03837 167 QRALLRRLGVGPEPDALLVSLFCY--ENAALPALLDALAQSG-SPVHLLVPEGRALAAVAAWLGDALLAAGDVHRRGALT 243 (371)
T ss_pred HHHHHHHcCCCCCCCCeEEEEEec--CChhHHHHHHHHHhCC-CCeEEEecCCccHHHHHHHhCccccCCccccccCceE
Confidence 455777889863344455544433 3345888888887643 356665554322 222222210 0 011222 4
Q ss_pred eEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEe
Q 010448 358 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 405 (510)
Q Consensus 358 v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s 405 (510)
+......+.+....++-.||+-++=- | =+++-|.-+|+|.|=.
T Consensus 244 ~~~LPf~~Q~~yD~LLW~cD~NfVRG--E---DSFVRAqWAgkPfvWh 286 (371)
T TIGR03837 244 VAVLPFVPQDDYDRLLWACDLNFVRG--E---DSFVRAQWAGKPFVWH 286 (371)
T ss_pred EEEcCCCChhhHHHHHHhChhcEeec--h---hHHHHHHHcCCCceee
Confidence 55555668888889999999987432 1 2678899999998854
No 232
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=37.52 E-value=3e+02 Score=24.51 Aligned_cols=40 Identities=18% Similarity=0.190 Sum_probs=28.3
Q ss_pred HHHHhCcEEEeCCCCCCccHH--HHHHHH------hCCCcEEecCCCccc
Q 010448 371 MIIAGADFILIPSRFEPCGLI--QLHAMR------YGTVPIVASTGGLVD 412 (510)
Q Consensus 371 ~~~~~adv~v~ps~~E~~g~~--~~Eama------~G~Pvv~s~~gg~~e 412 (510)
.++..||++|.-. -++|.- ++|++. ..+||+..+..|..+
T Consensus 92 ~m~~~sda~I~lP--GG~GTL~El~e~~~~~qlg~~~kPiil~n~~g~~~ 139 (178)
T TIGR00730 92 MMAELADAFIAMP--GGFGTLEELFEVLTWAQLGIHQKPIILFNVNGHFD 139 (178)
T ss_pred HHHHhCCEEEEcC--CCcchHHHHHHHHHHHHcCCCCCCEEEECCcchHH
Confidence 4788899988544 356664 777775 499999998655443
No 233
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=37.38 E-value=1.3e+02 Score=26.67 Aligned_cols=77 Identities=21% Similarity=0.115 Sum_probs=34.8
Q ss_pred hhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHH-----HhCcEEEeCCCCCCccHH
Q 010448 317 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII-----AGADFILIPSRFEPCGLI 391 (510)
Q Consensus 317 ~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~-----~~adv~v~ps~~E~~g~~ 391 (510)
..+++++.+++...-++-++|..+. ...+..+..-++..+..+...+.+++...+ ..+|+++ |-+.+
T Consensus 64 ~Dil~al~~a~~~~~~Iavv~~~~~--~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~~~~~G~~viV------Gg~~~ 135 (176)
T PF06506_consen 64 FDILRALAKAKKYGPKIAVVGYPNI--IPGLESIEELLGVDIKIYPYDSEEEIEAAIKQAKAEGVDVIV------GGGVV 135 (176)
T ss_dssp HHHHHHHHHCCCCTSEEEEEEESS---SCCHHHHHHHHT-EEEEEEESSHHHHHHHHHHHHHTT--EEE------ESHHH
T ss_pred hHHHHHHHHHHhcCCcEEEEecccc--cHHHHHHHHHhCCceEEEEECCHHHHHHHHHHHHHcCCcEEE------CCHHH
Confidence 3566677776655566777775441 111222222233334444444444444322 2356666 44444
Q ss_pred HHHHHHhCCC
Q 010448 392 QLHAMRYGTV 401 (510)
Q Consensus 392 ~~Eama~G~P 401 (510)
.--|-.+|.|
T Consensus 136 ~~~A~~~gl~ 145 (176)
T PF06506_consen 136 CRLARKLGLP 145 (176)
T ss_dssp HHHHHHTTSE
T ss_pred HHHHHHcCCc
Confidence 4444444544
No 234
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=36.72 E-value=28 Score=26.42 Aligned_cols=21 Identities=10% Similarity=0.295 Sum_probs=18.1
Q ss_pred hhhhhHHHHHHHCCCcEEEEe
Q 010448 4 ASSTKLDSFIQANGHRVMTIA 24 (510)
Q Consensus 4 ~~~~~la~~l~~~Gh~V~vi~ 24 (510)
-+.+.+.++|.++||+|.-+.
T Consensus 8 ~~Ls~v~~~L~~~GyeVv~l~ 28 (80)
T PF03698_consen 8 EGLSNVKEALREKGYEVVDLE 28 (80)
T ss_pred CCchHHHHHHHHCCCEEEecC
Confidence 456789999999999998775
No 235
>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]
Probab=36.54 E-value=4.7e+02 Score=26.56 Aligned_cols=144 Identities=12% Similarity=0.120 Sum_probs=74.6
Q ss_pred hCCCCCCCCcEEEEecCccccc---C-----hhhHHHHHHhhhh-CCcEEEEEecCChhHHHHHHHHHHHCCCceEEecc
Q 010448 293 VGLPVDRNIPVIGFIGRLEEQK---G-----SDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 363 (510)
Q Consensus 293 ~g~~~~~~~~~i~~~Grl~~~K---g-----~~~li~a~~~l~~-~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~ 363 (510)
.+++.+.++.+|+|+-.+.... | .+.-++.+.+... .+..+++-=. + .......... .+.+.+.. ..
T Consensus 200 ~~~~~~~~k~vIlyaPTfr~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ii~k~H-p-~is~~~~~~~-~~~~~~~~-vs 275 (388)
T COG1887 200 LALPLPQDKKVILYAPTFRDNDVLIGTQFFNLDIDIEKLKEKLGENEYVIIVKPH-P-LISDKIDKRY-ALDDFVLD-VS 275 (388)
T ss_pred hhcCCcccCceEEecCCccCCccccchhhhhhhhhHHHHHHhhccCCeEEEEecC-h-hhhhhhhhhh-hccceeEe-cc
Confidence 3344445678999999987765 2 2222333333322 3444433322 2 1222211111 22221222 21
Q ss_pred CCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEec-cccccCCCCCccCHHHHH
Q 010448 364 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMG-SFSVDCEAVDPVDVAAVS 442 (510)
Q Consensus 364 ~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~-~~~~~~~~~~~~d~~~la 442 (510)
- ..++..++..+|++|- -++.+..|+|..-+||+-..-.+ .+. ...-|+..+ .+.+-+. -..+..++.
T Consensus 276 ~-~~di~dll~~sDiLIT-----DySSv~fdf~~l~KPiify~~D~-~~y--~~~rg~~~d~~~~~Pg~--~~~~~~~li 344 (388)
T COG1887 276 D-NADINDLLLVSDILIT-----DYSSVIFDFMLLDKPIIFYTYDL-EQY--DELRGFYLDYKFEAPGE--VVETQEELI 344 (388)
T ss_pred c-chhHHHHHhhhCEEEe-----echHHHHHHHHhcCcEEEEecCh-HHH--HhhhhhhhhHHhcCCcc--ccccHHHHH
Confidence 2 4677789999999992 26889999999999999763221 111 112233321 0111000 125678888
Q ss_pred HHHHHHHHh
Q 010448 443 TTVRRALAT 451 (510)
Q Consensus 443 ~~i~~ll~~ 451 (510)
++|.....+
T Consensus 345 ~ai~~~~~~ 353 (388)
T COG1887 345 DAIKPYDED 353 (388)
T ss_pred HHHHhhhcc
Confidence 888877775
No 236
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=35.00 E-value=42 Score=25.10 Aligned_cols=23 Identities=17% Similarity=0.148 Sum_probs=19.6
Q ss_pred hhhhhHHHHHHHCCCcEEEEeeC
Q 010448 4 ASSTKLDSFIQANGHRVMTIAPR 26 (510)
Q Consensus 4 ~~~~~la~~l~~~Gh~V~vi~p~ 26 (510)
..--++|..|++.|.+|+++...
T Consensus 9 ~ig~E~A~~l~~~g~~vtli~~~ 31 (80)
T PF00070_consen 9 FIGIELAEALAELGKEVTLIERS 31 (80)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESS
T ss_pred HHHHHHHHHHHHhCcEEEEEecc
Confidence 34458999999999999999876
No 237
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=34.99 E-value=1.4e+02 Score=29.37 Aligned_cols=79 Identities=16% Similarity=0.265 Sum_probs=44.0
Q ss_pred CcEEEEEecCChhHHHHHHHHHHHCCCceEEeccC--------CHHHHHHHHHhCcEEEe--CCCCCC---ccHHHHHHH
Q 010448 330 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--------NIPLAHMIIAGADFILI--PSRFEP---CGLIQLHAM 396 (510)
Q Consensus 330 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~--------~~~~~~~~~~~adv~v~--ps~~E~---~g~~~~Eam 396 (510)
+-.+-|+|-|. +-+.+.+++..++-+|..+-.. ....+.++++.||++++ |...|+ ++-..++.|
T Consensus 145 gktvGIiG~G~--IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~~~~~~M 222 (311)
T PRK08410 145 GKKWGIIGLGT--IGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAYKELKLL 222 (311)
T ss_pred CCEEEEECCCH--HHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCchhhcccCHHHHHhC
Confidence 34555666555 4444445444444444433221 11235578999999876 333355 555677777
Q ss_pred HhCCCcEEecCCCc
Q 010448 397 RYGTVPIVASTGGL 410 (510)
Q Consensus 397 a~G~Pvv~s~~gg~ 410 (510)
--|.-+|-+.-|++
T Consensus 223 k~~a~lIN~aRG~v 236 (311)
T PRK08410 223 KDGAILINVGRGGI 236 (311)
T ss_pred CCCeEEEECCCccc
Confidence 77766665555543
No 238
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=34.70 E-value=1.3e+02 Score=29.72 Aligned_cols=77 Identities=25% Similarity=0.405 Sum_probs=44.9
Q ss_pred cEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCH------------HHHHHHHHhCcEEEe--CCCCCCccHH---HH
Q 010448 331 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI------------PLAHMIIAGADFILI--PSRFEPCGLI---QL 393 (510)
Q Consensus 331 ~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~------------~~~~~~~~~adv~v~--ps~~E~~g~~---~~ 393 (510)
-.+-|+|-|. +-+.+.+.+..++-+|..+-.+.. ..+.++++.||++++ |..-|+-|+. .+
T Consensus 143 kTvGIiG~G~--IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~i~~~~~ 220 (324)
T COG0111 143 KTVGIIGLGR--IGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGLINAEEL 220 (324)
T ss_pred CEEEEECCCH--HHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchhcccCHHHH
Confidence 3566666666 666666666666555555554322 235679999999876 4455776554 55
Q ss_pred HHHHhCCCcEEecCCC
Q 010448 394 HAMRYGTVPIVASTGG 409 (510)
Q Consensus 394 Eama~G~Pvv~s~~gg 409 (510)
..|--|.-.|-+.-|+
T Consensus 221 a~MK~gailIN~aRG~ 236 (324)
T COG0111 221 AKMKPGAILINAARGG 236 (324)
T ss_pred hhCCCCeEEEECCCcc
Confidence 5555555333333333
No 239
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=34.38 E-value=3.6e+02 Score=24.49 Aligned_cols=86 Identities=14% Similarity=0.037 Sum_probs=48.9
Q ss_pred HHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCC
Q 010448 322 AIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 401 (510)
Q Consensus 322 a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~P 401 (510)
.++.|.+...+++++... ..+.+.+++.. ..+...... .....+..+|+++..+..+.....+.+....+++
T Consensus 25 ka~~Ll~~ga~V~VIs~~---~~~~l~~l~~~--~~i~~~~~~---~~~~~l~~adlViaaT~d~elN~~i~~~a~~~~l 96 (202)
T PRK06718 25 RAITLLKYGAHIVVISPE---LTENLVKLVEE--GKIRWKQKE---FEPSDIVDAFLVIAATNDPRVNEQVKEDLPENAL 96 (202)
T ss_pred HHHHHHHCCCeEEEEcCC---CCHHHHHHHhC--CCEEEEecC---CChhhcCCceEEEEcCCCHHHHHHHHHHHHhCCc
Confidence 344444446677777643 23344555443 224332211 1123578899988887665555555555577888
Q ss_pred cEEecCCCccceEE
Q 010448 402 PIVASTGGLVDTVE 415 (510)
Q Consensus 402 vv~s~~gg~~e~v~ 415 (510)
|-+.+.+...+++-
T Consensus 97 vn~~d~~~~~~f~~ 110 (202)
T PRK06718 97 FNVITDAESGNVVF 110 (202)
T ss_pred EEECCCCccCeEEE
Confidence 88888766555444
No 240
>PF12683 DUF3798: Protein of unknown function (DUF3798); InterPro: IPR024258 This entry represents functionally uncharacterised proteins that are found in bacteria. They are typically between 247 and 417 amino acids in length. Most of the proteins in this entry have an N-terminal lipoprotein attachment site. These proteins have distant similarity to periplasmic ligand binding families suggesting that this family has a similar role.; PDB: 3QI7_A.
Probab=34.36 E-value=2.4e+02 Score=26.97 Aligned_cols=112 Identities=15% Similarity=0.181 Sum_probs=63.8
Q ss_pred HHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhh-CCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCC
Q 010448 287 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 365 (510)
Q Consensus 287 ~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~-~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~ 365 (510)
+++-++||-. .-..+.|.-++.. ..+..+.-+..|.. |+++.+|+-.+.+...+.+++.-++.++ +.++...+
T Consensus 23 e~l~~~Yg~~---~I~h~tyPdnf~~--e~EttIskI~~lAdDp~mKaIVv~q~vpGt~~af~kIkekRpD-Il~ia~~~ 96 (275)
T PF12683_consen 23 EELIKKYGDV---MIKHVTYPDNFMS--EQETTISKIVSLADDPDMKAIVVSQAVPGTAEAFRKIKEKRPD-ILLIAGEP 96 (275)
T ss_dssp HHHHHHHHHH---EEEEEE--TTGGG--CHHHHHHHHHGGGG-TTEEEEEEE-SS---HHHHHHHHHH-TT-SEEEESS-
T ss_pred HHHHHHhCcc---eEEEEeCCCcccc--hHHHHHHHHHHhccCCCccEEEEeCCCcchHHHHHHHHhcCCC-eEEEcCCC
Confidence 4455566631 1123445555433 36777777777665 7999999988777677788888877776 55666677
Q ss_pred HHHHHHHHHhCcEEEeCCCCCCccHHHHH-HHHhCCCcEEe
Q 010448 366 IPLAHMIIAGADFILIPSRFEPCGLIQLH-AMRYGTVPIVA 405 (510)
Q Consensus 366 ~~~~~~~~~~adv~v~ps~~E~~g~~~~E-ama~G~Pvv~s 405 (510)
.++...+-..+|+.+.+.. ...|..+.+ |-.+|.-..++
T Consensus 97 ~EDp~~i~~~aDi~~~~D~-~~~G~~i~~~Ak~mGAktFVh 136 (275)
T PF12683_consen 97 HEDPEVISSAADIVVNPDE-ISRGYTIVWAAKKMGAKTFVH 136 (275)
T ss_dssp -S-HHHHHHHSSEEEE--H-HHHHHHHHHHHHHTT-S-EEE
T ss_pred cCCHHHHhhccCeEeccch-hhccHHHHHHHHHcCCceEEE
Confidence 7777778899999997543 334554433 44566655554
No 241
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=34.32 E-value=1.9e+02 Score=27.88 Aligned_cols=92 Identities=9% Similarity=-0.030 Sum_probs=44.1
Q ss_pred cChhhHHHHHHhhhhCCc-EE-EEEecCCh---hHHHHHHHHHHHCCCceEEeccCCHHHH----HHHHHhCcEEEeCCC
Q 010448 314 KGSDILAAAIPHFIKENV-QI-IVLGTGKK---PMEKQLEQLEILYPEKARGVAKFNIPLA----HMIIAGADFILIPSR 384 (510)
Q Consensus 314 Kg~~~li~a~~~l~~~~~-~l-~i~G~g~~---~~~~~~~~l~~~~~~~v~~~~~~~~~~~----~~~~~~adv~v~ps~ 384 (510)
.-+..-++.+.++. |++ ++ ++..+... ...+.+++.+.+++..+....--+.++. ..+-...|+++++..
T Consensus 115 ~~~~~~l~l~~~l~-P~~k~igvl~~~~~~~~~~~~~~~~~~a~~~g~~l~~~~v~~~~~~~~~~~~l~~~~da~~~~~~ 193 (294)
T PF04392_consen 115 PPIEKQLELIKKLF-PDAKRIGVLYDPSEPNSVAQIEQLRKAAKKLGIELVEIPVPSSEDLEQALEALAEKVDALYLLPD 193 (294)
T ss_dssp --HHHHHHHHHHHS-TT--EEEEEEETT-HHHHHHHHHHHHHHHHTT-EEEEEEESSGGGHHHHHHHHCTT-SEEEE-S-
T ss_pred cCHHHHHHHHHHhC-CCCCEEEEEecCCCccHHHHHHHHHHHHHHcCCEEEEEecCcHhHHHHHHHHhhccCCEEEEECC
Confidence 34445555555553 333 34 34444432 3455667777777654443322222222 234557788887754
Q ss_pred C---CCccHHHHHHHHhCCCcEEec
Q 010448 385 F---EPCGLIQLHAMRYGTVPIVAS 406 (510)
Q Consensus 385 ~---E~~g~~~~Eama~G~Pvv~s~ 406 (510)
. ..+...+..+..+++||+++.
T Consensus 194 ~~~~~~~~~i~~~~~~~~iPv~~~~ 218 (294)
T PF04392_consen 194 NLVDSNFEAILQLANEAKIPVFGSS 218 (294)
T ss_dssp HHHHHTHHHHHHHCCCTT--EEESS
T ss_pred cchHhHHHHHHHHHHhcCCCEEECC
Confidence 2 334444556677899999986
No 242
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=34.02 E-value=2.9e+02 Score=27.88 Aligned_cols=112 Identities=13% Similarity=0.085 Sum_probs=68.5
Q ss_pred HHHHHHHHhCCCC-CCCCcEEEEecCcccccC-hhhHHHHHHhhhhCCcEEEEEecCC-hhHHHHHHH--HH----HHCC
Q 010448 285 LKEALQAEVGLPV-DRNIPVIGFIGRLEEQKG-SDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQ--LE----ILYP 355 (510)
Q Consensus 285 ~~~~~~~~~g~~~-~~~~~~i~~~Grl~~~Kg-~~~li~a~~~l~~~~~~l~i~G~g~-~~~~~~~~~--l~----~~~~ 355 (510)
.+..+.+++|++. .++.+.|...+- .+. +..+++++..-. ..+.++|.++-. ......+.. +. ...+
T Consensus 167 ~~~~~~~~lg~~~~~~~~~~vslF~Y---e~~~l~~ll~~~~~~~-~pv~llvp~g~~~~~~~~~~~~~~~~~g~~~~~g 242 (374)
T PF10093_consen 167 ARAAFLRRLGLPEPEPGALRVSLFCY---ENAALASLLDAWAASP-KPVHLLVPEGRALNSLAAWLGDALLQAGDSWQRG 242 (374)
T ss_pred HHHHHHHHcCCCCCCCCCeEEEEEeC---CchHHHHHHHHHhcCC-CCeEEEecCCccHHHHHHHhccccccCccccccC
Confidence 3667888899863 334455544443 343 778888877542 367777776433 223222220 00 0112
Q ss_pred C-ceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEe
Q 010448 356 E-KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 405 (510)
Q Consensus 356 ~-~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s 405 (510)
. .+.....++.++...++..||+.++=- | =+++-|+-+|+|.|=.
T Consensus 243 ~l~l~~lPF~~Q~~yD~LLw~cD~NfVRG--E---DSfVRAqwAgkPFvWh 288 (374)
T PF10093_consen 243 NLTLHVLPFVPQDDYDRLLWACDFNFVRG--E---DSFVRAQWAGKPFVWH 288 (374)
T ss_pred CeEEEECCCCCHHHHHHHHHhCccceEec--c---hHHHHHHHhCCCceEe
Confidence 2 455556668999999999999987422 2 2578899999998854
No 243
>PRK06932 glycerate dehydrogenase; Provisional
Probab=32.81 E-value=1.5e+02 Score=29.18 Aligned_cols=79 Identities=15% Similarity=0.109 Sum_probs=44.3
Q ss_pred CcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCC-------HHHHHHHHHhCcEEEeC--CCCCC---ccHHHHHHHH
Q 010448 330 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN-------IPLAHMIIAGADFILIP--SRFEP---CGLIQLHAMR 397 (510)
Q Consensus 330 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~-------~~~~~~~~~~adv~v~p--s~~E~---~g~~~~Eama 397 (510)
.-++-|+|-|. +-+.+.++...++-+|..+-... ...+.++++.||++++. ...|+ ++-..++.|-
T Consensus 147 gktvgIiG~G~--IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~~~l~~mk 224 (314)
T PRK06932 147 GSTLGVFGKGC--LGTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTETTQNLINAETLALMK 224 (314)
T ss_pred CCEEEEECCCH--HHHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChHHhcccCHHHHHhCC
Confidence 34555555555 44444444444443343322111 11345799999998863 33344 5666788887
Q ss_pred hCCCcEEecCCCc
Q 010448 398 YGTVPIVASTGGL 410 (510)
Q Consensus 398 ~G~Pvv~s~~gg~ 410 (510)
-|.-+|-+.-|++
T Consensus 225 ~ga~lIN~aRG~~ 237 (314)
T PRK06932 225 PTAFLINTGRGPL 237 (314)
T ss_pred CCeEEEECCCccc
Confidence 7776666665554
No 244
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=31.98 E-value=2.3e+02 Score=27.82 Aligned_cols=93 Identities=14% Similarity=0.132 Sum_probs=59.9
Q ss_pred hhhHHHHHHhhhhCCcE-E-EEEecCC---hhHHHHHHHHHHHCCCceEEeccCCHH----HHHHHHHhCcEEEeCCCC-
Q 010448 316 SDILAAAIPHFIKENVQ-I-IVLGTGK---KPMEKQLEQLEILYPEKARGVAKFNIP----LAHMIIAGADFILIPSRF- 385 (510)
Q Consensus 316 ~~~li~a~~~l~~~~~~-l-~i~G~g~---~~~~~~~~~l~~~~~~~v~~~~~~~~~----~~~~~~~~adv~v~ps~~- 385 (510)
++.-+++++++. |+++ + ++..++. ....++++..+...+..+....--... ....+....|++..|...
T Consensus 145 v~q~i~lik~~~-Pnak~Igv~Y~p~E~ns~~l~eelk~~A~~~Gl~vve~~v~~~ndi~~a~~~l~g~~d~i~~p~dn~ 223 (322)
T COG2984 145 VAQQIELIKALL-PNAKSIGVLYNPGEANSVSLVEELKKEARKAGLEVVEAAVTSVNDIPRAVQALLGKVDVIYIPTDNL 223 (322)
T ss_pred HHHHHHHHHHhC-CCCeeEEEEeCCCCcccHHHHHHHHHHHHHCCCEEEEEecCcccccHHHHHHhcCCCcEEEEecchH
Confidence 445555555553 5665 3 5666665 356677888888877655443322222 222456788999998754
Q ss_pred C--CccHHHHHHHHhCCCcEEecCCC
Q 010448 386 E--PCGLIQLHAMRYGTVPIVASTGG 409 (510)
Q Consensus 386 E--~~g~~~~Eama~G~Pvv~s~~gg 409 (510)
. ++...+.+|....+|+++++.+-
T Consensus 224 i~s~~~~l~~~a~~~kiPli~sd~~~ 249 (322)
T COG2984 224 IVSAIESLLQVANKAKIPLIASDTSS 249 (322)
T ss_pred HHHHHHHHHHHHHHhCCCeecCCHHH
Confidence 3 35556889999999999998644
No 245
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=31.88 E-value=2.2e+02 Score=24.66 Aligned_cols=75 Identities=11% Similarity=0.156 Sum_probs=47.9
Q ss_pred cEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCC----h--hHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHh
Q 010448 302 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----K--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 375 (510)
Q Consensus 302 ~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~----~--~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 375 (510)
..|.|+|. ....=...++.++.++ +..+.++++.. + +..+..++.+.+.+..+... +...+.+..
T Consensus 3 l~i~~vGD-~~~rv~~Sl~~~~~~~---g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~g~~i~~~-----~~~~e~l~~ 73 (158)
T PF00185_consen 3 LKIAYVGD-GHNRVAHSLIELLAKF---GMEVVLIAPEGLRYPPDPEVLEKAKKNAKKNGGKITIT-----DDIEEALKG 73 (158)
T ss_dssp EEEEEESS-TTSHHHHHHHHHHHHT---TSEEEEESSGGGGGSHHHHHHHHHHHHHHHHTTEEEEE-----SSHHHHHTT
T ss_pred CEEEEECC-CCChHHHHHHHHHHHc---CCEEEEECCCcccCCCCHHHHHHHHHHHHHhCCCeEEE-----eCHHHhcCC
Confidence 57999996 3344466777777776 67799999744 1 23444555555555555544 223357999
Q ss_pred CcEEEeCCCC
Q 010448 376 ADFILIPSRF 385 (510)
Q Consensus 376 adv~v~ps~~ 385 (510)
+|++......
T Consensus 74 aDvvy~~~~~ 83 (158)
T PF00185_consen 74 ADVVYTDRWQ 83 (158)
T ss_dssp -SEEEEESSS
T ss_pred CCEEEEcCcc
Confidence 9998877654
No 246
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=31.22 E-value=39 Score=35.40 Aligned_cols=24 Identities=21% Similarity=0.512 Sum_probs=21.1
Q ss_pred hhhhHHHHHHHCCCcEEEEeeCCC
Q 010448 5 SSTKLDSFIQANGHRVMTIAPRYD 28 (510)
Q Consensus 5 ~~~~la~~l~~~Gh~V~vi~p~~~ 28 (510)
.+..+|+.|+++||+||++++...
T Consensus 21 ~~~~la~~L~~~gh~vt~~~~~~~ 44 (496)
T KOG1192|consen 21 PMLQLAKRLAERGHNVTVVTPSFN 44 (496)
T ss_pred HHHHHHHHHHHcCCceEEEEeech
Confidence 467899999999999999998754
No 247
>cd05565 PTS_IIB_lactose PTS_IIB_lactose: subunit IIB of enzyme II (EII) of the lactose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) found in Firmicutes as well as Actinobacteria. In this system, EII is a lactose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. The IIC and IIB domains are expressed as a single protein from the lac operon. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include lactose, chitobiose/lichenan, ascorbate, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.
Probab=30.64 E-value=2.5e+02 Score=22.29 Aligned_cols=72 Identities=11% Similarity=0.097 Sum_probs=43.7
Q ss_pred EEEEecCC--hhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHH--HHHhCCCcEEec
Q 010448 333 IIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLH--AMRYGTVPIVAS 406 (510)
Q Consensus 333 l~i~G~g~--~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~E--ama~G~Pvv~s~ 406 (510)
++++|.|- .-+.+.+++.+.+.+..+.. ...+..+....+..+|+++..... .+-..-++ +-..|+||...+
T Consensus 4 ll~C~~GaSSs~la~km~~~a~~~gi~~~i-~a~~~~e~~~~~~~~Dvill~PQv-~~~~~~i~~~~~~~~ipv~~I~ 79 (99)
T cd05565 4 LVLCAGGGTSGLLANALNKGAKERGVPLEA-AAGAYGSHYDMIPDYDLVILAPQM-ASYYDELKKDTDRLGIKLVTTT 79 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCcEEE-EEeeHHHHHHhccCCCEEEEcChH-HHHHHHHHHHhhhcCCCEEEeC
Confidence 45566664 34667788888887654442 345556666788999998876542 12222222 334578887765
No 248
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=30.62 E-value=42 Score=31.31 Aligned_cols=19 Identities=21% Similarity=0.322 Sum_probs=16.0
Q ss_pred hhHHHHHHHCCCcEEEEee
Q 010448 7 TKLDSFIQANGHRVMTIAP 25 (510)
Q Consensus 7 ~~la~~l~~~Gh~V~vi~p 25 (510)
..||++|.++||+|++++.
T Consensus 30 ~aLA~~L~~~G~~V~li~r 48 (229)
T PRK06732 30 KIIAETFLAAGHEVTLVTT 48 (229)
T ss_pred HHHHHHHHhCCCEEEEEEC
Confidence 4678888899999999874
No 249
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=30.46 E-value=4.2e+02 Score=24.11 Aligned_cols=85 Identities=19% Similarity=0.115 Sum_probs=50.5
Q ss_pred HHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEec-cCCHHHHHHHHHhCcEEEeCCCC-CCccHHHHHHHHhC
Q 010448 322 AIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA-KFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYG 399 (510)
Q Consensus 322 a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~-~~~~~~~~~~~~~adv~v~ps~~-E~~g~~~~Eama~G 399 (510)
.++.|.+.+.+++++.+.. .+.+++++... ++.... .+.. ..+..+++++..+.. |..-...-+|-..|
T Consensus 24 k~~~Ll~~ga~VtVvsp~~---~~~l~~l~~~~--~i~~~~~~~~~----~dl~~~~lVi~at~d~~ln~~i~~~a~~~~ 94 (205)
T TIGR01470 24 KARLLLKAGAQLRVIAEEL---ESELTLLAEQG--GITWLARCFDA----DILEGAFLVIAATDDEELNRRVAHAARARG 94 (205)
T ss_pred HHHHHHHCCCEEEEEcCCC---CHHHHHHHHcC--CEEEEeCCCCH----HHhCCcEEEEECCCCHHHHHHHHHHHHHcC
Confidence 3444444577777877543 24455555442 354332 3332 246788887776654 34445566777889
Q ss_pred CCcEEecCCCccceEE
Q 010448 400 TVPIVASTGGLVDTVE 415 (510)
Q Consensus 400 ~Pvv~s~~gg~~e~v~ 415 (510)
+||-+.+.....+++-
T Consensus 95 ilvn~~d~~e~~~f~~ 110 (205)
T TIGR01470 95 VPVNVVDDPELCSFIF 110 (205)
T ss_pred CEEEECCCcccCeEEE
Confidence 9998887766555444
No 250
>PRK05583 ribosomal protein L7Ae family protein; Provisional
Probab=30.09 E-value=2.9e+02 Score=22.12 Aligned_cols=77 Identities=10% Similarity=0.071 Sum_probs=49.2
Q ss_pred ChhhHHHHHHhhhhCCcEEEEEe-cCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHH
Q 010448 315 GSDILAAAIPHFIKENVQIIVLG-TGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQL 393 (510)
Q Consensus 315 g~~~li~a~~~l~~~~~~l~i~G-~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~ 393 (510)
|.+..+++++. ..+.++|+- +..++..+.+..++..++..+. ..++.+++...+-...+.++.-.-+++.-.++
T Consensus 21 G~~~v~~aik~---gk~~lVI~A~D~s~~~kkki~~~~~~~~vp~~--~~~t~~eLg~a~Gk~~~~~iai~d~g~a~~l~ 95 (104)
T PRK05583 21 GYNKCEEAIKK---KKVYLIIISNDISENSKNKFKNYCNKYNIPYI--EGYSKEELGNAIGRDEIKILGVKDKNMAKKLL 95 (104)
T ss_pred cHHHHHHHHHc---CCceEEEEeCCCCHhHHHHHHHHHHHcCCCEE--EecCHHHHHHHhCCCCeEEEEEeChHHHHHHH
Confidence 55666666654 467777666 4567778888888777654343 33677777766666555555555566776666
Q ss_pred HHH
Q 010448 394 HAM 396 (510)
Q Consensus 394 Eam 396 (510)
+.+
T Consensus 96 ~~~ 98 (104)
T PRK05583 96 KLW 98 (104)
T ss_pred HHH
Confidence 654
No 251
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=29.99 E-value=4.8e+02 Score=24.68 Aligned_cols=93 Identities=11% Similarity=-0.059 Sum_probs=61.5
Q ss_pred ccChhhHHHHHHhhhhCCcEEEEEecCC------------hhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEE
Q 010448 313 QKGSDILAAAIPHFIKENVQIIVLGTGK------------KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 380 (510)
Q Consensus 313 ~Kg~~~li~a~~~l~~~~~~l~i~G~g~------------~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v 380 (510)
...-+.+++.++.+++..+.++..|.-. .+-.+.+.+...+++..+. ...++.+.+..+...+|++-
T Consensus 25 vEs~e~~~~~a~~~~~~g~~~~r~g~~kpRts~~sf~G~G~~gl~~L~~~~~~~Gl~~~-Tev~d~~~v~~~~e~vdilq 103 (250)
T PRK13397 25 IESYDHIRLAASSAKKLGYNYFRGGAYKPRTSAASFQGLGLQGIRYLHEVCQEFGLLSV-SEIMSERQLEEAYDYLDVIQ 103 (250)
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEecccCCCCCCcccCCCCHHHHHHHHHHHHHcCCCEE-EeeCCHHHHHHHHhcCCEEE
Confidence 3344677777777776678888777411 1344566777777775343 34456677766777899999
Q ss_pred eCCCCCCccHHHHHHH-HhCCCcEEecC
Q 010448 381 IPSRFEPCGLIQLHAM-RYGTVPIVAST 407 (510)
Q Consensus 381 ~ps~~E~~g~~~~Eam-a~G~Pvv~s~~ 407 (510)
.||+. -.-..+++++ ..|+||+.+..
T Consensus 104 Igs~~-~~n~~LL~~va~tgkPVilk~G 130 (250)
T PRK13397 104 VGARN-MQNFEFLKTLSHIDKPILFKRG 130 (250)
T ss_pred ECccc-ccCHHHHHHHHccCCeEEEeCC
Confidence 99975 2224456655 56999998864
No 252
>COG0214 SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism]
Probab=29.77 E-value=2.1e+02 Score=26.59 Aligned_cols=72 Identities=19% Similarity=0.256 Sum_probs=48.9
Q ss_pred CccHHHHHHHHhCCCcEEecCCCccceE------EcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHhhC-HHHHHH
Q 010448 387 PCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAE 459 (510)
Q Consensus 387 ~~g~~~~Eama~G~Pvv~s~~gg~~e~v------~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~~~-~~~~~~ 459 (510)
++-++..-+-.-.+|||....||+..-. .-|..|..+++ -++...|++.++.+|-+...+++ ++...+
T Consensus 194 p~elv~~~~~~grLPVvnFAAGGvATPADAALMM~LGadGVFVGS-----GIFKS~~P~~~A~AIV~A~~~yddp~~lae 268 (296)
T COG0214 194 PYELVKEVAKLGRLPVVNFAAGGVATPADAALMMQLGADGVFVGS-----GIFKSSNPEKRAKAIVEATTHYDDPEVLAE 268 (296)
T ss_pred hHHHHHHHHHhCCCCeEeecccCcCChhHHHHHHHhCCCeEEecc-----cccCCCCHHHHHHHHHHHHHccCCHHHHHH
Confidence 4455555555667889888899876422 23667777763 12378999999999999988874 455555
Q ss_pred HHHH
Q 010448 460 MMKN 463 (510)
Q Consensus 460 ~~~~ 463 (510)
.++.
T Consensus 269 vs~~ 272 (296)
T COG0214 269 VSEG 272 (296)
T ss_pred HHHH
Confidence 5444
No 253
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Bipartite response regulator proteins are involved in a two-component signal transduction system in bacteria, and certain eukaryotes like protozoa, that functions to detect and respond to environmental changes []. These systems have been detected during host invasion, drug resistance, motility, phosphate uptake, osmoregulation, and nitrogen fixation, amongst others []. The two-component system consists of a histidine protein kinase environmental sensor that phosphorylates the receiver domain of a response regulator protein; phosphorylation induces a conformational change in the response regulator, which activates the effector domain, triggering the cellular response []. The domains of the two-component proteins are highly modular, but the core structures and activities are maintained. The response regulators act as phosphorylation-activated switches to affect a cellular response, usually by transcriptional regulation. Most of these proteins consist of two domains, an N-terminal response regulator receiver domain, and a variable C-terminal effector domain with DNA-binding activity. This entry represents the response regulator receiver domain, which belongs to the CheY family, and receives the signal from the sensor partner in the two-component system.; GO: 0000156 two-component response regulator activity, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2QR3_A 2QXY_A 1I3C_A 1JLK_A 2PKX_A 2PL1_A 3H1F_A 3H1E_A 3GWG_A 3H1G_A ....
Probab=29.72 E-value=2.7e+02 Score=21.57 Aligned_cols=94 Identities=16% Similarity=0.190 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHHCCCceEEeccCCHHHHHHHHH--hCcEEEeCCCC-CCccHHHHHHHHh---CCCcEEec-CCC---cc
Q 010448 342 PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY---GTVPIVAS-TGG---LV 411 (510)
Q Consensus 342 ~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~--~adv~v~ps~~-E~~g~~~~Eama~---G~Pvv~s~-~gg---~~ 411 (510)
...+.++.+....+-. .....-+.+.....+. ..|++++-... ..-|..+++.+.. ++|+|+-- ... ..
T Consensus 9 ~~~~~l~~~l~~~~~~-~v~~~~~~~~~~~~~~~~~~d~iiid~~~~~~~~~~~~~~i~~~~~~~~ii~~t~~~~~~~~~ 87 (112)
T PF00072_consen 9 EIRELLEKLLERAGYE-EVTTASSGEEALELLKKHPPDLIIIDLELPDGDGLELLEQIRQINPSIPIIVVTDEDDSDEVQ 87 (112)
T ss_dssp HHHHHHHHHHHHTTEE-EEEEESSHHHHHHHHHHSTESEEEEESSSSSSBHHHHHHHHHHHTTTSEEEEEESSTSHHHHH
T ss_pred HHHHHHHHHHHhCCCC-EEEEECCHHHHHHHhcccCceEEEEEeeeccccccccccccccccccccEEEecCCCCHHHHH
Confidence 3455555555544420 2222233333333333 34777776554 3466666665543 66766433 222 23
Q ss_pred ceEEcCCceeEeccccccCCCCCccCHHHHHHHHH
Q 010448 412 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 446 (510)
Q Consensus 412 e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~ 446 (510)
+.+..|.+|++. .|-+.+++.++|+
T Consensus 88 ~~~~~g~~~~l~----------kp~~~~~l~~~i~ 112 (112)
T PF00072_consen 88 EALRAGADDYLS----------KPFSPEELRAAIN 112 (112)
T ss_dssp HHHHTTESEEEE----------SSSSHHHHHHHHH
T ss_pred HHHHCCCCEEEE----------CCCCHHHHHHhhC
Confidence 445568899998 8999999998874
No 254
>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2.4.2.6 from EC) catalyses the cleavage of the glycosidic bonds of 2-deoxyribonucleosides. Nucleoside 2-deoxyribosyltransferases can be divided into two groups based on their substrate specificity: class I enzymes are specific for the transfer of deoxyribose between two purines, while class II enzymes will transfer the deoxyribose between either purines or pyrimidines. The structure of the class I [] and class II [] enzymes are very similar. In class I enzymes, the purine base shields the active site from solvent, which the smaller pyrimidine base cannot do, while in class II enzymes the active site is shielded by a loop (residues 48-62). Both classes of enzymes are found in various Lactobacillus species and participate in nucleoside recycling in these microorganisms. This entry represents both classes of enzymes.; GO: 0050144 nucleoside deoxyribosyltransferase activity, 0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity, 0009159 deoxyribonucleoside monophosphate catabolic process; PDB: 1S2L_A 1S2D_C 1S2I_A 1S3F_B 1S2G_C 2A0K_A 2F67_A 2F64_B 2F62_A 2F2T_A ....
Probab=29.60 E-value=65 Score=26.04 Aligned_cols=39 Identities=15% Similarity=0.106 Sum_probs=27.1
Q ss_pred HHHHhCcEEEeCCCC-CCccHHHHH---HHHhCCCcEEecCCC
Q 010448 371 MIIAGADFILIPSRF-EPCGLIQLH---AMRYGTVPIVASTGG 409 (510)
Q Consensus 371 ~~~~~adv~v~ps~~-E~~g~~~~E---ama~G~Pvv~s~~gg 409 (510)
..+..||++|..... ..-.-+.+| |.+.|+||++-....
T Consensus 57 ~~i~~~D~via~l~~~~~d~Gt~~ElG~A~algkpv~~~~~d~ 99 (113)
T PF05014_consen 57 EGIRECDIVIANLDGFRPDSGTAFELGYAYALGKPVILLTEDD 99 (113)
T ss_dssp HHHHHSSEEEEEECSSS--HHHHHHHHHHHHTTSEEEEEECCC
T ss_pred HHHHHCCEEEEECCCCCCCCcHHHHHHHHHHCCCEEEEEEcCC
Confidence 479999999976543 234445555 778999999876544
No 255
>PF00533 BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IPR001357 The BRCT domain (after the C_terminal domain of a breast cancer susceptibility protein) is found predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage [], for example as found in the breast cancer DNA-repair protein BRCA1. The domain is an approximately 100 amino acid tandem repeat, which appears to act as a phospho-protein binding domain []. A chitin biosynthesis protein from yeast also seems to belong to this group. ; GO: 0005622 intracellular; PDB: 3L46_A 3AL3_A 3AL2_A 1WF6_A 3II6_X 2NTE_B 3FA2_A 2R1Z_A 2COK_A 2K7F_A ....
Probab=29.53 E-value=67 Score=23.37 Aligned_cols=66 Identities=11% Similarity=0.026 Sum_probs=44.9
Q ss_pred CCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEec
Q 010448 329 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 406 (510)
Q Consensus 329 ~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~ 406 (510)
.+..|.+ +..+..-.+.++++...+++.+. . .+-...+.+|.... .........+.+.|+|+|..+
T Consensus 7 ~g~~f~i-~~~~~~~~~~l~~~i~~~GG~v~--~--------~~~~~~thvI~~~~-~~~~~k~~~~~~~~i~iV~~~ 72 (78)
T PF00533_consen 7 EGCTFCI-SGFDSDEREELEQLIKKHGGTVS--N--------SFSKKTTHVIVGNP-NKRTKKYKAAIANGIPIVSPD 72 (78)
T ss_dssp TTEEEEE-SSTSSSHHHHHHHHHHHTTEEEE--S--------SSSTTSSEEEESSS-HCCCHHHHHHHHTTSEEEETH
T ss_pred CCEEEEE-ccCCCCCHHHHHHHHHHcCCEEE--e--------ecccCcEEEEeCCC-CCccHHHHHHHHCCCeEecHH
Confidence 3677777 44444467778999999886552 1 24556777776654 235666889999999999764
No 256
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=27.51 E-value=2.2e+02 Score=22.81 Aligned_cols=68 Identities=13% Similarity=0.179 Sum_probs=41.3
Q ss_pred CCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHH--hCcEEEeCCCCCCccHHHHHHHHhCCCcEEec
Q 010448 329 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 406 (510)
Q Consensus 329 ~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~--~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~ 406 (510)
++++++-+=+.. .+..++.+.+++. ..+.. ..++++ ..|+++..+....-.-.+.+++..|++|++-.
T Consensus 24 ~~~~v~~v~d~~---~~~~~~~~~~~~~--~~~~~-----~~~ll~~~~~D~V~I~tp~~~h~~~~~~~l~~g~~v~~EK 93 (120)
T PF01408_consen 24 PDFEVVAVCDPD---PERAEAFAEKYGI--PVYTD-----LEELLADEDVDAVIIATPPSSHAEIAKKALEAGKHVLVEK 93 (120)
T ss_dssp TTEEEEEEECSS---HHHHHHHHHHTTS--EEESS-----HHHHHHHTTESEEEEESSGGGHHHHHHHHHHTTSEEEEES
T ss_pred CCcEEEEEEeCC---HHHHHHHHHHhcc--cchhH-----HHHHHHhhcCCEEEEecCCcchHHHHHHHHHcCCEEEEEc
Confidence 456655333333 2234444566553 22221 224565 68999888877666667888999999887764
No 257
>PRK06487 glycerate dehydrogenase; Provisional
Probab=27.37 E-value=1.7e+02 Score=28.72 Aligned_cols=80 Identities=18% Similarity=0.196 Sum_probs=46.9
Q ss_pred CcEEEEEecCChhHHHHHHHHHHHCCCceEEeccC------CHHHHHHHHHhCcEEEeC--CCCCC---ccHHHHHHHHh
Q 010448 330 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF------NIPLAHMIIAGADFILIP--SRFEP---CGLIQLHAMRY 398 (510)
Q Consensus 330 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~------~~~~~~~~~~~adv~v~p--s~~E~---~g~~~~Eama~ 398 (510)
+-++-|+|-|. +-+.+.++...++-+|..+-.. ....+.++++.||++++. ...|+ ++-..+..|--
T Consensus 148 gktvgIiG~G~--IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~~~~~~mk~ 225 (317)
T PRK06487 148 GKTLGLLGHGE--LGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGARELALMKP 225 (317)
T ss_pred CCEEEEECCCH--HHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChHHhcCcCHHHHhcCCC
Confidence 44566666666 5555555555555444433221 112345799999998864 33344 56667888877
Q ss_pred CCCcEEecCCCcc
Q 010448 399 GTVPIVASTGGLV 411 (510)
Q Consensus 399 G~Pvv~s~~gg~~ 411 (510)
|.-+|-+.-|++.
T Consensus 226 ga~lIN~aRG~vV 238 (317)
T PRK06487 226 GALLINTARGGLV 238 (317)
T ss_pred CeEEEECCCcccc
Confidence 7766666655543
No 258
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=27.33 E-value=1.9e+02 Score=27.63 Aligned_cols=37 Identities=19% Similarity=0.050 Sum_probs=29.0
Q ss_pred HHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCC
Q 010448 373 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 409 (510)
Q Consensus 373 ~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg 409 (510)
...+|+++-.|..+..--.+..|+..|+|+|+...|.
T Consensus 66 ~~~~DvVIdfT~p~~~~~~~~~al~~g~~vVigttg~ 102 (266)
T TIGR00036 66 ETDPDVLIDFTTPEGVLNHLKFALEHGVRLVVGTTGF 102 (266)
T ss_pred cCCCCEEEECCChHHHHHHHHHHHHCCCCEEEECCCC
Confidence 3468999988866666667888999999999866654
No 259
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=27.25 E-value=2.1e+02 Score=27.15 Aligned_cols=75 Identities=19% Similarity=0.145 Sum_probs=45.8
Q ss_pred HHHHHHHHhCcEEEeCCC-CCCccHHHHHHHHhCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHH
Q 010448 367 PLAHMIIAGADFILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 445 (510)
Q Consensus 367 ~~~~~~~~~adv~v~ps~-~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i 445 (510)
.++ .-++.||++|.--. .|++=-.+++.+ .+.+++....++..+ ++. . .-+.|.+|.+...+++.|
T Consensus 45 ~d~-~~l~~ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~---~~~-------~-dPH~Wldp~n~~~~a~~I 111 (264)
T cd01020 45 TDA-AKVSTADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDD---KEG-------D-NPHLWYDPETMSKVANAL 111 (264)
T ss_pred HHH-HHHhhCCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccC---CCC-------C-CCceecCHhHHHHHHHHH
Confidence 344 36899999998763 476666666655 455555544333210 110 0 112355999999999999
Q ss_pred HHHHHhhCH
Q 010448 446 RRALATYGT 454 (510)
Q Consensus 446 ~~ll~~~~~ 454 (510)
.+.|..-++
T Consensus 112 ~~~L~~~dP 120 (264)
T cd01020 112 ADALVKADP 120 (264)
T ss_pred HHHHHHhCc
Confidence 998875433
No 260
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=27.08 E-value=5.3e+02 Score=25.16 Aligned_cols=85 Identities=12% Similarity=0.071 Sum_probs=51.9
Q ss_pred HHHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCC----hhHHHHHHHHHHHCCCceEEe
Q 010448 286 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGV 361 (510)
Q Consensus 286 ~~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~----~~~~~~~~~l~~~~~~~v~~~ 361 (510)
--.+++++|-- +...|.|+|.+. .=..-++.++..+ ++.+.++++.. +...+.+++.+.+.+..+...
T Consensus 136 l~Ti~e~~g~l---~g~~v~~vGd~~--~v~~Sl~~~l~~~---g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~ 207 (304)
T TIGR00658 136 LLTIIEHFGKL---KGVKVVYVGDGN--NVCNSLMLAGAKL---GMDVVVATPEGYEPDADIVKKAQEIAKENGGSVELT 207 (304)
T ss_pred HHHHHHHhCCC---CCcEEEEEeCCC--chHHHHHHHHHHc---CCEEEEECCchhcCCHHHHHHHHHHHHHcCCeEEEE
Confidence 33456666632 337899999872 3455566666655 78999999643 233344444455555444322
Q ss_pred ccCCHHHHHHHHHhCcEEEeCC
Q 010448 362 AKFNIPLAHMIIAGADFILIPS 383 (510)
Q Consensus 362 ~~~~~~~~~~~~~~adv~v~ps 383 (510)
.++.+.+..+|++....
T Consensus 208 -----~d~~~a~~~aDvvy~~~ 224 (304)
T TIGR00658 208 -----HDPVEAVKGADVIYTDV 224 (304)
T ss_pred -----cCHHHHhCCCCEEEEcC
Confidence 22335799999999864
No 261
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=26.57 E-value=3.7e+02 Score=22.18 Aligned_cols=80 Identities=18% Similarity=0.064 Sum_probs=53.6
Q ss_pred ceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccceEEc--CCceeEeccccccCCCCC
Q 010448 357 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVDCEAVD 434 (510)
Q Consensus 357 ~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e~v~~--~~~G~l~~~~~~~~~~~~ 434 (510)
.+.+....+.++....+..+|+++..+.. ++.-.+++++ -++-.|++...|.-.+--+ ...|+.+.+ ++
T Consensus 20 ~v~~~~~~~~~~~~~~l~~~d~ii~~~~~-~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n-------~~ 90 (133)
T PF00389_consen 20 EVEFCDSPSEEELAERLKDADAIIVGSGT-PLTAEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTN-------VP 90 (133)
T ss_dssp EEEEESSSSHHHHHHHHTTESEEEESTTS-TBSHHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE--------T
T ss_pred eEEEeCCCCHHHHHHHhCCCeEEEEcCCC-CcCHHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEE-------eC
Confidence 47777777888888899999999976544 5778888877 8888999988887543111 245665521 13
Q ss_pred ccCHHHHHHHH
Q 010448 435 PVDVAAVSTTV 445 (510)
Q Consensus 435 ~~d~~~la~~i 445 (510)
..+.++.|+..
T Consensus 91 g~~~~aVAE~a 101 (133)
T PF00389_consen 91 GYNAEAVAEHA 101 (133)
T ss_dssp TTTHHHHHHHH
T ss_pred CcCCcchhccc
Confidence 34555666555
No 262
>PRK08366 vorA 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha; Reviewed
Probab=26.49 E-value=3e+02 Score=27.98 Aligned_cols=69 Identities=16% Similarity=0.126 Sum_probs=41.8
Q ss_pred CcEEEEEecCC--hhHHHHHHHHHHH---CCC-ceEEeccCCHHHHHHHHHhCcEEEeCCCCCC---ccHHHHHHHHh
Q 010448 330 NVQIIVLGTGK--KPMEKQLEQLEIL---YPE-KARGVAKFNIPLAHMIIAGADFILIPSRFEP---CGLIQLHAMRY 398 (510)
Q Consensus 330 ~~~l~i~G~g~--~~~~~~~~~l~~~---~~~-~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~---~g~~~~Eama~ 398 (510)
|..++|++.|. ...++.++.+..+ .+. ++..+.++|.+.+..++..++.+++.-...+ +|.-+.|-.++
T Consensus 259 dAe~~iV~~Gs~~~~~~eav~~lr~~G~kvg~l~i~~~~PfP~~~i~~~l~~~k~ViVvE~n~~~Gq~g~l~~ev~~~ 336 (390)
T PRK08366 259 DADFVFMGMGSLMGTVKEAVDLLRKEGYKVGYAKVRWFRPFPKEELYEIAESVKGIAVLDRNFSFGQEGILFTEAKGA 336 (390)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHhcCCceeeEEEeeecCCCHHHHHHHHhcCCEEEEEeCCCCCCcccHHHHHHHHH
Confidence 45566666554 3344555555322 221 4556778899888899999998887766544 34345554443
No 263
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=26.02 E-value=4.3e+02 Score=25.54 Aligned_cols=19 Identities=11% Similarity=0.024 Sum_probs=16.6
Q ss_pred hhHHHHHHHCCCcEEEEee
Q 010448 7 TKLDSFIQANGHRVMTIAP 25 (510)
Q Consensus 7 ~~la~~l~~~Gh~V~vi~p 25 (510)
-.|++.|+++|++|.++..
T Consensus 14 ~~~~~~l~~~g~~v~~~g~ 32 (287)
T TIGR02853 14 LELIRKLEELDAKISLIGF 32 (287)
T ss_pred HHHHHHHHHCCCEEEEEec
Confidence 4689999999999999864
No 264
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=25.94 E-value=3.7e+02 Score=25.37 Aligned_cols=102 Identities=18% Similarity=0.255 Sum_probs=66.4
Q ss_pred EEEEecCcccccChhhHHHHHHhhhhC-CcEEEEEecCC----hhH-HHHHHHHHHHCCCceEEec--cCCHHHHHHHHH
Q 010448 303 VIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGK----KPM-EKQLEQLEILYPEKARGVA--KFNIPLAHMIIA 374 (510)
Q Consensus 303 ~i~~~Grl~~~Kg~~~li~a~~~l~~~-~~~l~i~G~g~----~~~-~~~~~~l~~~~~~~v~~~~--~~~~~~~~~~~~ 374 (510)
.++|+|-+.-.-|...+-+-+..++.+ ++.|+|+...+ -.+ ++..+++ .+.+..+...+ .++..+..+++.
T Consensus 2 riLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l-~~~G~dviT~GNH~wd~~ei~~~i~ 80 (266)
T COG1692 2 RILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKEL-LEAGADVITLGNHTWDQKEILDFID 80 (266)
T ss_pred eEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHH-HHhCCCEEecccccccchHHHHHhh
Confidence 588999999999999999999999874 78899997522 112 2222222 23343455444 346666678999
Q ss_pred hCcEEEeCCCC-C---CccHHHHHHHHhCCCcEEecC
Q 010448 375 GADFILIPSRF-E---PCGLIQLHAMRYGTVPIVAST 407 (510)
Q Consensus 375 ~adv~v~ps~~-E---~~g~~~~Eama~G~Pvv~s~~ 407 (510)
..+.++=|..+ + |.|..+++ ..|.-+.+++.
T Consensus 81 ~~~~ilRP~N~p~~~~G~G~~~f~--~ng~ki~V~Nl 115 (266)
T COG1692 81 NADRILRPANYPDGTPGKGSRIFK--INGKKLAVINL 115 (266)
T ss_pred cccceeccCCCCCCCCcceEEEEE--eCCcEEEEEEe
Confidence 99999999876 3 34444554 44555555543
No 265
>KOG0368 consensus Acetyl-CoA carboxylase [Lipid transport and metabolism]
Probab=25.93 E-value=1.4e+02 Score=35.45 Aligned_cols=92 Identities=14% Similarity=0.011 Sum_probs=54.6
Q ss_pred ccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHH
Q 010448 313 QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQ 392 (510)
Q Consensus 313 ~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~ 392 (510)
+-|+|++++.+.+. ++.-+.+|.|.......+-++-...+ +.|.++- .. .+.+..| -.+.++
T Consensus 123 yANVdlIvdiAe~~---~VdAVWaGWGHASENP~LPe~L~~~~--IiFiGPP-~~---aM~sLGD---------KI~STI 184 (2196)
T KOG0368|consen 123 YANVDLIVDIAERT---DVDAVWAGWGHASENPELPERLSANG--IIFIGPP-AS---AMRALGD---------KIASTI 184 (2196)
T ss_pred cccHHHHHHHHHhc---ccceEeecccccccCcchHHHHHhcC--cEEECCc-hH---HHHHhcc---------hHHHHH
Confidence 45789999998876 89999999986322223333333322 6665532 22 2233333 223333
Q ss_pred HHHHHhCCCcEEecCCCccceEEcCCceeEe
Q 010448 393 LHAMRYGTVPIVASTGGLVDTVEEGFTGFQM 423 (510)
Q Consensus 393 ~Eama~G~Pvv~s~~gg~~e~v~~~~~G~l~ 423 (510)
=|.++|+|++.-...|+.-.=.+..++++.
T Consensus 185 -vAQsa~vPtlpWSGS~v~~~~~~~~~~~v~ 214 (2196)
T KOG0368|consen 185 -IAQSAGVPTLPWSGSGVKVEHIEDKTNLVS 214 (2196)
T ss_pred -HHHhcCCCcccccCCcceeeeecccCCeEe
Confidence 389999999988777765333334556553
No 266
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=25.87 E-value=66 Score=28.87 Aligned_cols=20 Identities=20% Similarity=0.124 Sum_probs=14.6
Q ss_pred hhHHHHHHHCCCcEEEEeeC
Q 010448 7 TKLDSFIQANGHRVMTIAPR 26 (510)
Q Consensus 7 ~~la~~l~~~Gh~V~vi~p~ 26 (510)
..||+++..+|++|++++..
T Consensus 33 ~~lA~~~~~~Ga~V~li~g~ 52 (185)
T PF04127_consen 33 AALAEEAARRGAEVTLIHGP 52 (185)
T ss_dssp HHHHHHHHHTT-EEEEEE-T
T ss_pred HHHHHHHHHCCCEEEEEecC
Confidence 35677778899999999865
No 267
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=25.59 E-value=3.6e+02 Score=28.82 Aligned_cols=101 Identities=16% Similarity=0.026 Sum_probs=61.4
Q ss_pred hHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHH
Q 010448 318 ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 397 (510)
Q Consensus 318 ~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama 397 (510)
++++++...++..-++-++|-.. ....++.+..-++..+......+.++... .+.++-+
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~--~~~~~~~~~~~l~~~i~~~~~~~~~e~~~-------------------~v~~lk~ 153 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQE--TIPALVAFQKTFNLRIEQRSYVTEEDARG-------------------QINELKA 153 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCc--ccHHHHHHHHHhCCceEEEEecCHHHHHH-------------------HHHHHHH
Confidence 47778877766566888888765 33445555555554555555555555432 3345556
Q ss_pred hCCCcEEecCCCccceEEcCCceeEeccccccCCCCCccCHHHHHHHHHHHHHh
Q 010448 398 YGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 451 (510)
Q Consensus 398 ~G~Pvv~s~~gg~~e~v~~~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~ 451 (510)
.|+-+|.-+.-....-.+.+.+|.+. .+.+++.+++.++++.
T Consensus 154 ~G~~~vvG~~~~~~~A~~~g~~g~~~------------~s~e~i~~a~~~A~~~ 195 (538)
T PRK15424 154 NGIEAVVGAGLITDLAEEAGMTGIFI------------YSAATVRQAFEDALDM 195 (538)
T ss_pred CCCCEEEcCchHHHHHHHhCCceEEe------------cCHHHHHHHHHHHHHH
Confidence 66666665543333333445677765 2458888888888764
No 268
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=24.99 E-value=6e+02 Score=25.26 Aligned_cols=88 Identities=9% Similarity=-0.015 Sum_probs=51.8
Q ss_pred HHHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCC----hhHHHHHHHHHHHCCCceEEec
Q 010448 287 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVA 362 (510)
Q Consensus 287 ~~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~----~~~~~~~~~l~~~~~~~v~~~~ 362 (510)
-.+++++|...+-+...|.|+|.+. .=...++.++..+ ++.+.++++.. +++.+.+++.+...+..+...
T Consensus 140 ~Ti~e~~g~g~~l~glkv~~vGD~~--~v~~Sl~~~~~~~---g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~- 213 (338)
T PRK02255 140 FTMIEHLPEGKKLEDCKVVFVGDAT--QVCVSLMFIATKM---GMDFVHFGPKGYQLPEEHLAIAEENCEVSGGSVLVT- 213 (338)
T ss_pred HHHHHHhCCCCCCCCCEEEEECCCc--hHHHHHHHHHHhC---CCEEEEECCCccccCHHHHHHHHHHHHhcCCeEEEE-
Confidence 3455666421011237999999862 2345555666554 78999999743 234445555555555444332
Q ss_pred cCCHHHHHHHHHhCcEEEeCCC
Q 010448 363 KFNIPLAHMIIAGADFILIPSR 384 (510)
Q Consensus 363 ~~~~~~~~~~~~~adv~v~ps~ 384 (510)
.++.+.+..+|++.....
T Consensus 214 ----~d~~eav~~aDvvy~~~w 231 (338)
T PRK02255 214 ----DDVDEAVKDADFVYTDVW 231 (338)
T ss_pred ----cCHHHHhCCCCEEEEccc
Confidence 223457999999998553
No 269
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=24.99 E-value=4.5e+02 Score=22.69 Aligned_cols=41 Identities=17% Similarity=0.054 Sum_probs=24.5
Q ss_pred HHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccc
Q 010448 372 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 412 (510)
Q Consensus 372 ~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e 412 (510)
-+..+|+++..+..+.....+.+....+.+|-..+.....+
T Consensus 67 dl~~a~lViaaT~d~e~N~~i~~~a~~~~~vn~~d~~~~~~ 107 (157)
T PRK06719 67 DIKDAHLIYAATNQHAVNMMVKQAAHDFQWVNVVSDGTESS 107 (157)
T ss_pred cCCCceEEEECCCCHHHHHHHHHHHHHCCcEEECCCCCcCc
Confidence 46788999888766444444444434456666655544333
No 270
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=24.57 E-value=5.7e+02 Score=23.71 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=63.1
Q ss_pred HHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEec-cCCHHHHHHHHHhCcEEEeCCCCCCc-cHHHHHHHHhCC
Q 010448 323 IPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA-KFNIPLAHMIIAGADFILIPSRFEPC-GLIQLHAMRYGT 400 (510)
Q Consensus 323 ~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~-~~~~~~~~~~~~~adv~v~ps~~E~~-g~~~~Eama~G~ 400 (510)
+..|.+.+.++.++.+.- .+.+++++.. +++...- .+... .+..+++++..+..+.. -...-+|-+.|+
T Consensus 41 ~~~Ll~~gA~VtVVap~i---~~el~~l~~~--~~i~~~~r~~~~~----dl~g~~LViaATdD~~vN~~I~~~a~~~~~ 111 (223)
T PRK05562 41 GKTFLKKGCYVYILSKKF---SKEFLDLKKY--GNLKLIKGNYDKE----FIKDKHLIVIATDDEKLNNKIRKHCDRLYK 111 (223)
T ss_pred HHHHHhCCCEEEEEcCCC---CHHHHHHHhC--CCEEEEeCCCChH----HhCCCcEEEECCCCHHHHHHHHHHHHHcCC
Confidence 344444477888888543 2334445443 2343332 23332 45778888877665443 344555667799
Q ss_pred CcEEecCCCccceEEcC---CceeEeccccccCCCCCccCHHHHHHHHHHHHHh
Q 010448 401 VPIVASTGGLVDTVEEG---FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 451 (510)
Q Consensus 401 Pvv~s~~gg~~e~v~~~---~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ll~~ 451 (510)
+|.+.+.....+++... ..++.+...+. --.|.-...+.+.|.+++.+
T Consensus 112 lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~---G~sP~lar~lR~~ie~~l~~ 162 (223)
T PRK05562 112 LYIDCSDYKKGLCIIPYQRSTKNFVFALNTK---GGSPKTSVFIGEKVKNFLKK 162 (223)
T ss_pred eEEEcCCcccCeEEeeeEEecCCEEEEEECC---CcCcHHHHHHHHHHHHHHHH
Confidence 99988876655554432 11233321111 01455556777777777754
No 271
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=24.48 E-value=3.9e+02 Score=21.79 Aligned_cols=39 Identities=10% Similarity=-0.003 Sum_probs=18.2
Q ss_pred EEEEecCcc-cccChhhHHHHHHhhhhCCcEEEEEecCCh
Q 010448 303 VIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIVLGTGKK 341 (510)
Q Consensus 303 ~i~~~Grl~-~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~ 341 (510)
+|+..+... .......+++.+++...+++.+++.|..++
T Consensus 53 ~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~ 92 (122)
T cd02071 53 VIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPP 92 (122)
T ss_pred EEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCH
Confidence 444444443 233344444444443113667666666553
No 272
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=24.39 E-value=2.6e+02 Score=24.24 Aligned_cols=95 Identities=20% Similarity=0.209 Sum_probs=51.0
Q ss_pred cEEEEecCcccccChhhHHHHH------HhhhhCCc-E-EEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHH
Q 010448 302 PVIGFIGRLEEQKGSDILAAAI------PHFIKENV-Q-IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 373 (510)
Q Consensus 302 ~~i~~~Grl~~~Kg~~~li~a~------~~l~~~~~-~-l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~ 373 (510)
-+++.+|.-. .|.||.++ .+|.+..+ + ++-+|.|..-............+-.+ ....|..+. .+.+
T Consensus 5 ~vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~i-d~y~f~psl-~e~I 78 (170)
T KOG3349|consen 5 TVFVTVGTTS----FDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTI-DGYDFSPSL-TEDI 78 (170)
T ss_pred EEEEEecccc----HHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEE-EEEecCccH-HHHH
Confidence 3677777643 56666544 33333332 3 33457663211122222222222122 223344443 3688
Q ss_pred HhCcEEEeCCCCCCccHHHHHHHHhCCCcEEec
Q 010448 374 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 406 (510)
Q Consensus 374 ~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~ 406 (510)
+.||+++.- +-.-+++|.+..|+|.|+--
T Consensus 79 ~~AdlVIsH----AGaGS~letL~l~KPlivVv 107 (170)
T KOG3349|consen 79 RSADLVISH----AGAGSCLETLRLGKPLIVVV 107 (170)
T ss_pred hhccEEEec----CCcchHHHHHHcCCCEEEEe
Confidence 899999932 34557899999999988753
No 273
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=24.36 E-value=6.2e+02 Score=25.08 Aligned_cols=131 Identities=13% Similarity=0.127 Sum_probs=73.8
Q ss_pred HHHHHhccceee--cCHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHH
Q 010448 210 KAGILESDMVLT--VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 287 (510)
Q Consensus 210 ~~~~~~ad~vi~--vS~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (510)
+-.-..+|.|+. .++...+.+.+. ..+-|| |+-+ +...|.. .-.+--
T Consensus 96 rvls~y~D~iviR~~~~~~~~~~a~~-------------~~vPVI-Na~~-~~~HPtQ----------------aLaDl~ 144 (331)
T PRK02102 96 RVLGRMYDGIEYRGFKQEIVEELAKY-------------SGVPVW-NGLT-DEWHPTQ----------------MLADFM 144 (331)
T ss_pred HHHhhcCCEEEEECCchHHHHHHHHh-------------CCCCEE-ECCC-CCCChHH----------------HHHHHH
Confidence 334456887775 344555555542 134444 6655 3456632 112233
Q ss_pred HHHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCC----hhHHHHHHHHHHHCCCceEEecc
Q 010448 288 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVAK 363 (510)
Q Consensus 288 ~~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~----~~~~~~~~~l~~~~~~~v~~~~~ 363 (510)
.+++++|-- +...|.|+|-+.. .=..-++.++..+ ++.+.++++.. +++.+..++.+...+..+...
T Consensus 145 Ti~e~~g~l---~g~~va~vGd~~~-~v~~Sl~~~~~~~---g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~-- 215 (331)
T PRK02102 145 TMKEHFGPL---KGLKLAYVGDGRN-NMANSLMVGGAKL---GMDVRICAPKELWPEEELVALAREIAKETGAKITIT-- 215 (331)
T ss_pred HHHHHhCCC---CCCEEEEECCCcc-cHHHHHHHHHHHc---CCEEEEECCcccccCHHHHHHHHHHHHHcCCeEEEE--
Confidence 456666632 3378999998742 2355556666555 78999999743 233344455555555444321
Q ss_pred CCHHHHHHHHHhCcEEEeCC
Q 010448 364 FNIPLAHMIIAGADFILIPS 383 (510)
Q Consensus 364 ~~~~~~~~~~~~adv~v~ps 383 (510)
.++.+.+..+|++..-.
T Consensus 216 ---~d~~ea~~~aDvvyt~~ 232 (331)
T PRK02102 216 ---EDPEEAVKGADVIYTDV 232 (331)
T ss_pred ---cCHHHHhCCCCEEEEcC
Confidence 22335799999998853
No 274
>COG3613 Nucleoside 2-deoxyribosyltransferase [Nucleotide transport and metabolism]
Probab=24.13 E-value=2.8e+02 Score=24.52 Aligned_cols=37 Identities=22% Similarity=0.232 Sum_probs=26.2
Q ss_pred HHHHhCcEEEeCC---CCCCccHHHHH---HHHhCCCcEEecC
Q 010448 371 MIIAGADFILIPS---RFEPCGLIQLH---AMRYGTVPIVAST 407 (510)
Q Consensus 371 ~~~~~adv~v~ps---~~E~~g~~~~E---ama~G~Pvv~s~~ 407 (510)
..+.+||++|.-- +.|+=+-+..| |.|.|+||++...
T Consensus 64 ~~i~~aD~vla~ld~fr~~~DsGTa~E~GYa~AlgKPv~~~~~ 106 (172)
T COG3613 64 KLIDQADIVLANLDPFRPDPDSGTAFELGYAIALGKPVYAYRK 106 (172)
T ss_pred HHHhhcCEEEEecCCCCCCCCCcchHHHHHHHHcCCceEEEee
Confidence 3788999998743 33443445555 7899999999864
No 275
>smart00292 BRCT breast cancer carboxy-terminal domain.
Probab=23.95 E-value=2.7e+02 Score=19.65 Aligned_cols=67 Identities=15% Similarity=0.102 Sum_probs=39.8
Q ss_pred CcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEec
Q 010448 330 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 406 (510)
Q Consensus 330 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~ 406 (510)
+..+.+.|+......+.+.++...+++.+....... .+..+|..... ........+...++|+|...
T Consensus 5 g~~~~~~g~~~~~~~~~l~~~i~~~Gg~~~~~~~~~---------~~thvi~~~~~-~~~~~~~~~~~~~~~iV~~~ 71 (80)
T smart00292 5 GKVFVITGKFDKNERDELKELIEALGGKVTSSLSSK---------TTTHVIVGSPE-GGKLELLLAIALGIPIVTED 71 (80)
T ss_pred CeEEEEeCCCCCccHHHHHHHHHHcCCEEecccCcc---------ceeEEEEcCCC-CccHHHHHHHHcCCCCccHH
Confidence 578888884333456778888888876554322111 45555555432 22222677888888887653
No 276
>PRK05299 rpsB 30S ribosomal protein S2; Provisional
Probab=23.84 E-value=4.3e+02 Score=25.16 Aligned_cols=38 Identities=13% Similarity=0.037 Sum_probs=25.1
Q ss_pred hCcEEEeCCCCCCccHHHHHHHHhCCCcEEe-cCCCccce
Q 010448 375 GADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDT 413 (510)
Q Consensus 375 ~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s-~~gg~~e~ 413 (510)
.-|++++..-.. -..++.||..+|+|+|+- |+...++.
T Consensus 157 ~Pd~iii~d~~~-~~~ai~Ea~kl~IPiIaivDTn~dp~~ 195 (258)
T PRK05299 157 LPDALFVVDPNK-EHIAVKEARKLGIPVVAIVDTNCDPDG 195 (258)
T ss_pred CCCEEEEeCCCc-cHHHHHHHHHhCCCEEEEeeCCCCCcc
Confidence 356666655432 237899999999999986 34444433
No 277
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=23.80 E-value=2.8e+02 Score=27.37 Aligned_cols=43 Identities=28% Similarity=0.426 Sum_probs=30.2
Q ss_pred HHHHHHhCcEEEe--CCCCCCc---cHHHHHHHHhCCCcEEecCCCcc
Q 010448 369 AHMIIAGADFILI--PSRFEPC---GLIQLHAMRYGTVPIVASTGGLV 411 (510)
Q Consensus 369 ~~~~~~~adv~v~--ps~~E~~---g~~~~Eama~G~Pvv~s~~gg~~ 411 (510)
..++++.||++++ |...|+. +-..++.|--|.-+|-+.-|++.
T Consensus 194 l~ell~~sDii~l~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG~~V 241 (324)
T COG1052 194 LDELLAESDIISLHCPLTPETRHLINAEELAKMKPGAILVNTARGGLV 241 (324)
T ss_pred HHHHHHhCCEEEEeCCCChHHhhhcCHHHHHhCCCCeEEEECCCcccc
Confidence 4579999999875 5555664 55578888888766666666543
No 278
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=23.70 E-value=1.3e+02 Score=30.91 Aligned_cols=67 Identities=16% Similarity=0.287 Sum_probs=47.0
Q ss_pred CcEEEEecCcccccChhhHHHHHHhhhh-CCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEE
Q 010448 301 IPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 379 (510)
Q Consensus 301 ~~~i~~~Grl~~~Kg~~~li~a~~~l~~-~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~ 379 (510)
..+++|.-...-..-...+++|++.+.+ .++.++|+|.|...+ ...+.|++|.+...+.+|.+-
T Consensus 163 ~~viv~pt~VQG~~A~~eIv~aI~~an~~~~~DvlIVaRGGGSi---------------EDLW~FNdE~vaRAi~~s~iP 227 (440)
T COG1570 163 VEVIVYPTLVQGEGAAEEIVEAIERANQRGDVDVLIVARGGGSI---------------EDLWAFNDEIVARAIAASRIP 227 (440)
T ss_pred CeEEEEeccccCCCcHHHHHHHHHHhhccCCCCEEEEecCcchH---------------HHHhccChHHHHHHHHhCCCC
Confidence 4689999998888889999999998876 468888998776333 334567766655444444444
Q ss_pred EeC
Q 010448 380 LIP 382 (510)
Q Consensus 380 v~p 382 (510)
|+.
T Consensus 228 vIS 230 (440)
T COG1570 228 VIS 230 (440)
T ss_pred eEe
Confidence 443
No 279
>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]
Probab=23.61 E-value=3e+02 Score=27.45 Aligned_cols=101 Identities=9% Similarity=0.133 Sum_probs=66.1
Q ss_pred CcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCH-HHHHHHHHhCcEEEeCCCCCCccHHHH--HHHHhCCCcEEec
Q 010448 330 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI-PLAHMIIAGADFILIPSRFEPCGLIQL--HAMRYGTVPIVAS 406 (510)
Q Consensus 330 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~-~~~~~~~~~adv~v~ps~~E~~g~~~~--Eama~G~Pvv~s~ 406 (510)
+--|+|+|+ ++.++.++.+.+..|...++|+. ++...+-..-++=++.|.+++|-.+-+ -|++.- .|-.+
T Consensus 114 ~g~LlIVGn-----R~~iq~lAL~~~~AVLvTGGF~~s~evi~lAne~~lPvlstsYDTFTVAtmIN~Al~n~--lIKkd 186 (432)
T COG4109 114 PGGLLIVGN-----REDIQLLALENGNAVLVTGGFDVSDEVIKLANEKGLPVLSTSYDTFTVATMINKALSNQ--LIKKD 186 (432)
T ss_pred CCceEEEec-----HHHHHHHHHhcCCeEEEeCCCCccHHHHHhhcccCCceEEecccceeHHHHHHHHHHHh--hhhhh
Confidence 457889995 45788888888877888898853 344457778888888888999877633 333332 23333
Q ss_pred CCCccceEEc-CCceeEeccccccCCCCCccCHHHHHHHHHH
Q 010448 407 TGGLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 447 (510)
Q Consensus 407 ~gg~~e~v~~-~~~G~l~~~~~~~~~~~~~~d~~~la~~i~~ 447 (510)
.--..++..+ ...+++. +.+..+++-+...+
T Consensus 187 I~~Vedi~~P~~~~~yL~----------~~d~v~d~~~l~~k 218 (432)
T COG4109 187 IITVEDIMTPLEDTSYLR----------ETDTVEDWLDLVEK 218 (432)
T ss_pred eeeHHHhccccccceecc----------ccccHHHHHHHHHH
Confidence 3333344442 3567776 66777777766655
No 280
>PRK05395 3-dehydroquinate dehydratase; Provisional
Probab=23.58 E-value=3.1e+02 Score=23.50 Aligned_cols=64 Identities=17% Similarity=0.091 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHHCCCceEEeccC-CHHHHHHHHHh----Cc-EEEeCCCCCCccHHHHHHHH-hCCCcEEec
Q 010448 342 PMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIAG----AD-FILIPSRFEPCGLIQLHAMR-YGTVPIVAS 406 (510)
Q Consensus 342 ~~~~~~~~l~~~~~~~v~~~~~~-~~~~~~~~~~~----ad-v~v~ps~~E~~g~~~~Eama-~G~Pvv~s~ 406 (510)
++.+.+++.+.+.+..+.++-.- .++.+. .+.. +| +++-|--+--.+..+.+|++ .++|+|=-.
T Consensus 30 ~i~~~~~~~a~~~g~~v~~~QSN~EGelId-~I~~a~~~~dgiiINpga~THtSiAl~DAl~~~~~P~VEVH 100 (146)
T PRK05395 30 DIEALLEEEAAELGVELEFFQSNHEGELID-RIHEARDGADGIIINPGAYTHTSVALRDALAAVSIPVIEVH 100 (146)
T ss_pred HHHHHHHHHHHHcCCEEEEEeeCcHHHHHH-HHHhcccCCcEEEECchHHHHHHHHHHHHHHcCCCCEEEEe
Confidence 45556666666655444443322 233333 3332 23 44445555557888888874 588988443
No 281
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=23.43 E-value=5.6e+02 Score=23.18 Aligned_cols=98 Identities=14% Similarity=0.042 Sum_probs=56.8
Q ss_pred ccChhhHHHHHHhhhhCCcEEEEEecCC---hhHHHHHHHHHHHCCCceEEeccC---CHHHHHHHHHhCcEEEeCC---
Q 010448 313 QKGSDILAAAIPHFIKENVQIIVLGTGK---KPMEKQLEQLEILYPEKARGVAKF---NIPLAHMIIAGADFILIPS--- 383 (510)
Q Consensus 313 ~Kg~~~li~a~~~l~~~~~~l~i~G~g~---~~~~~~~~~l~~~~~~~v~~~~~~---~~~~~~~~~~~adv~v~ps--- 383 (510)
....+.+-+.+.+....+.+++++.... +.+.+.+.+...+.+..+...... +.+...+.+..+|+++++-
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~ 91 (210)
T cd03129 12 AHARPILQDFLARAGGAGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQ 91 (210)
T ss_pred cChHHHHHHHHHHcCCCCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcH
Confidence 3344444444444432467888887643 234444555555555444433333 2355557899999999874
Q ss_pred -----CC-CC-ccHHHHHHHHhCCCcEEecCCCc
Q 010448 384 -----RF-EP-CGLIQLHAMRYGTVPIVASTGGL 410 (510)
Q Consensus 384 -----~~-E~-~g~~~~Eama~G~Pvv~s~~gg~ 410 (510)
.+ +. .--.+.+....|+|++.+..|.+
T Consensus 92 ~~~~~~l~~t~~~~~i~~~~~~G~v~~G~SAGA~ 125 (210)
T cd03129 92 LRLLSVLRETPLLDAILKRVARGVVIGGTSAGAA 125 (210)
T ss_pred HHHHHHHHhCChHHHHHHHHHcCCeEEEcCHHHH
Confidence 12 22 33357888888998888776543
No 282
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=23.36 E-value=5.5e+02 Score=24.43 Aligned_cols=99 Identities=12% Similarity=0.055 Sum_probs=59.1
Q ss_pred EEecCcccccChhhHHHHHHhhhhCCcEEEEE-------------ecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHH
Q 010448 305 GFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-------------GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 371 (510)
Q Consensus 305 ~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~-------------G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~ 371 (510)
+.+| .......+.+++.++++++-..++... |.|. +-.+.+++...+.+..+. ...++...+..
T Consensus 28 ~IAG-pc~ie~~~~~~~~A~~lk~~~~k~~r~~~~KpRtsp~s~~g~g~-~gl~~l~~~~~~~Gl~~~-t~~~d~~~~~~ 104 (260)
T TIGR01361 28 VIAG-PCSVESEEQIMETARFVKEAGAKILRGGAFKPRTSPYSFQGLGE-EGLKLLRRAADEHGLPVV-TEVMDPRDVEI 104 (260)
T ss_pred EEEe-CCccCCHHHHHHHHHHHHHHHHHhccCceecCCCCCccccccHH-HHHHHHHHHHHHhCCCEE-EeeCChhhHHH
Confidence 3444 444556778888888887532232221 2222 233456677777764333 33456666666
Q ss_pred HHHhCcEEEeCCCCCCccHHHHHHH-HhCCCcEEecC
Q 010448 372 IIAGADFILIPSRFEPCGLIQLHAM-RYGTVPIVAST 407 (510)
Q Consensus 372 ~~~~adv~v~ps~~E~~g~~~~Eam-a~G~Pvv~s~~ 407 (510)
+...+|++-.+|.. -....++++. ..|+||+.+..
T Consensus 105 l~~~~d~lkI~s~~-~~n~~LL~~~a~~gkPVilk~G 140 (260)
T TIGR01361 105 VAEYADILQIGARN-MQNFELLKEVGKQGKPVLLKRG 140 (260)
T ss_pred HHhhCCEEEECccc-ccCHHHHHHHhcCCCcEEEeCC
Confidence 66779999999975 2223355544 56999998874
No 283
>TIGR00853 pts-lac PTS system, lactose/cellobiose family IIB component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Lac family includes several sequenced lactose (b-galactoside) permeases of Gram-positive bacteria as well as those in E. coli. While the Lac family usually consists of two polypeptide components IIA and IICB, the Chb permease of E. coli consists of three IIA, IIB and IIC. This family is specific for the IIB subunit of the Lac PTS family.
Probab=23.10 E-value=3.2e+02 Score=21.35 Aligned_cols=74 Identities=15% Similarity=0.126 Sum_probs=43.2
Q ss_pred EEEEecCC--hhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHH--hCCCcEEecCC
Q 010448 333 IIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR--YGTVPIVASTG 408 (510)
Q Consensus 333 l~i~G~g~--~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama--~G~Pvv~s~~g 408 (510)
++++|.|- .-+.+.+++.+.+.+..+.. ...+...........|+++...... +-..-++..+ .|+||...+..
T Consensus 7 Ll~C~~G~sSS~l~~k~~~~~~~~gi~~~v-~a~~~~~~~~~~~~~Dvill~pqi~-~~~~~i~~~~~~~~ipv~~I~~~ 84 (95)
T TIGR00853 7 LLLCAAGMSTSLLVNKMNKAAEEYGVPVKI-AAGSYGAAGEKLDDADVVLLAPQVA-YMLPDLKKETDKKGIPVEVINGA 84 (95)
T ss_pred EEECCCchhHHHHHHHHHHHHHHCCCcEEE-EEecHHHHHhhcCCCCEEEECchHH-HHHHHHHHHhhhcCCCEEEeChh
Confidence 56667764 33456677777776644432 2344445555678899998776432 2233344333 47799887643
No 284
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=23.01 E-value=63 Score=33.11 Aligned_cols=20 Identities=20% Similarity=0.298 Sum_probs=17.5
Q ss_pred hhHHHHHHHCCCcEEEEeeC
Q 010448 7 TKLDSFIQANGHRVMTIAPR 26 (510)
Q Consensus 7 ~~la~~l~~~Gh~V~vi~p~ 26 (510)
-.|+++|+++||+|+.+|..
T Consensus 19 ~aL~~eL~~~gheV~~~~~~ 38 (406)
T COG1819 19 LALGKELRRRGHEVVFASTG 38 (406)
T ss_pred HHHHHHHHhcCCeEEEEeCH
Confidence 36899999999999999854
No 285
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=22.99 E-value=2.8e+02 Score=27.39 Aligned_cols=42 Identities=26% Similarity=0.383 Sum_probs=28.7
Q ss_pred HHHHHHhCcEEEe--CCCCCC---ccHHHHHHHHhCCCcEEecCCCc
Q 010448 369 AHMIIAGADFILI--PSRFEP---CGLIQLHAMRYGTVPIVASTGGL 410 (510)
Q Consensus 369 ~~~~~~~adv~v~--ps~~E~---~g~~~~Eama~G~Pvv~s~~gg~ 410 (510)
+.++++.||++++ |...|+ ++-..++.|--|.-+|-+.-|++
T Consensus 194 l~ell~~sDvv~lh~plt~~T~~li~~~~l~~mk~ga~lIN~aRG~v 240 (323)
T PRK15409 194 LDTLLQESDFVCIILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPV 240 (323)
T ss_pred HHHHHHhCCEEEEeCCCChHHhhccCHHHHhcCCCCeEEEECCCccc
Confidence 3568999999876 333344 55568888877776666665554
No 286
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=22.79 E-value=5.4e+02 Score=22.81 Aligned_cols=57 Identities=18% Similarity=0.280 Sum_probs=32.1
Q ss_pred CCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCC
Q 010448 329 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF 385 (510)
Q Consensus 329 ~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~ 385 (510)
...++++++...+...+..+++....+..+......+.+.....++.+|+++..+-.
T Consensus 51 ~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~~ 107 (194)
T cd01078 51 EGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGAA 107 (194)
T ss_pred CCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCCC
Confidence 355777777654333333333332333334433334556666788999998887644
No 287
>PF11238 DUF3039: Protein of unknown function (DUF3039); InterPro: IPR021400 This family of proteins with unknown function appears to be restricted to Actinobacteria.
Probab=22.67 E-value=61 Score=22.79 Aligned_cols=17 Identities=12% Similarity=-0.056 Sum_probs=14.3
Q ss_pred HHHHHHHHhCCCcEEec
Q 010448 390 LIQLHAMRYGTVPIVAS 406 (510)
Q Consensus 390 ~~~~Eama~G~Pvv~s~ 406 (510)
-.+.|++.+|.||+|--
T Consensus 15 ~kI~esav~G~pVvALC 31 (58)
T PF11238_consen 15 DKIAESAVMGTPVVALC 31 (58)
T ss_pred hHHHHHHhcCceeEeee
Confidence 35899999999999863
No 288
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=22.40 E-value=6e+02 Score=23.15 Aligned_cols=106 Identities=21% Similarity=0.234 Sum_probs=61.3
Q ss_pred EEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHH-HHHHHhCcEE-E
Q 010448 303 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA-HMIIAGADFI-L 380 (510)
Q Consensus 303 ~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~-~~~~~~adv~-v 380 (510)
+++=+|.+......+..+++ ..+|++.+.-+.+..+. ....+. ....+-.+.++. ...-..+|.+ +
T Consensus 63 ~~iGaGTV~~~~~~~~a~~a-------GA~fivsp~~~~~v~~~----~~~~~~-~~~~G~~t~~E~~~A~~~Gad~vk~ 130 (206)
T PRK09140 63 ALIGAGTVLSPEQVDRLADA-------GGRLIVTPNTDPEVIRR----AVALGM-VVMPGVATPTEAFAALRAGAQALKL 130 (206)
T ss_pred cEEeEEecCCHHHHHHHHHc-------CCCEEECCCCCHHHHHH----HHHCCC-cEEcccCCHHHHHHHHHcCCCEEEE
Confidence 56667776665544444433 78899888766433333 233332 333344444443 3344567777 4
Q ss_pred eCCCCCCccHHHHHHHHhC----CCcEEecCCCc-----cceEEcCCceeEec
Q 010448 381 IPSRFEPCGLIQLHAMRYG----TVPIVASTGGL-----VDTVEEGFTGFQMG 424 (510)
Q Consensus 381 ~ps~~E~~g~~~~Eama~G----~Pvv~s~~gg~-----~e~v~~~~~G~l~~ 424 (510)
+|+ +..|...+..+... +|++++ ||+ .+++..|..|+.++
T Consensus 131 Fpa--~~~G~~~l~~l~~~~~~~ipvvai--GGI~~~n~~~~~~aGa~~vav~ 179 (206)
T PRK09140 131 FPA--SQLGPAGIKALRAVLPPDVPVFAV--GGVTPENLAPYLAAGAAGFGLG 179 (206)
T ss_pred CCC--CCCCHHHHHHHHhhcCCCCeEEEE--CCCCHHHHHHHHHCCCeEEEEe
Confidence 564 45788777776643 556655 454 56666777777764
No 289
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=22.33 E-value=8.8e+02 Score=25.07 Aligned_cols=138 Identities=14% Similarity=0.059 Sum_probs=75.1
Q ss_pred HHHHHhccceeec--CHHHHHHHhcCCCCCCchhhhhhcCCceEecCCCCCCCCCCCCccccccCCCcCChhhchHHHHH
Q 010448 210 KAGILESDMVLTV--SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 287 (510)
Q Consensus 210 ~~~~~~ad~vi~v--S~~~~~~l~~~~~~g~~~~~~~~~~ki~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (510)
+-.-+++|.|+.= ++...+.+.+. ..+-|| |+-|.+..+|... -.+--
T Consensus 177 rvLs~y~D~IviR~~~~~~~~e~A~~-------------s~vPVI-NAgdg~~~HPtQa----------------LaDl~ 226 (429)
T PRK11891 177 RVMSGYVDALVIRHPEQGSVAEFARA-------------TNLPVI-NGGDGPGEHPSQA----------------LLDLY 226 (429)
T ss_pred HHHHHhCCEEEEeCCchhHHHHHHHh-------------CCCCEE-ECCCCCCCCcHHH----------------HHHHH
Confidence 4445568877764 34455555542 134444 7776556666421 12233
Q ss_pred HHHHHhCC-CCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEEeccCCH
Q 010448 288 ALQAEVGL-PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 366 (510)
Q Consensus 288 ~~~~~~g~-~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~ 366 (510)
.+++++|- ...-+...|.|+|-+...+=...++.++..+ ..+.+.++++..-...+.+.+.+.+.+..+...
T Consensus 227 Ti~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~--~G~~v~l~~P~~~~~~~~~~~~~~~~G~~v~~~----- 299 (429)
T PRK11891 227 TIQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALY--RGLKFTLVSPPTLEMPAYIVEQISRNGHVIEQT----- 299 (429)
T ss_pred HHHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHh--cCCEEEEECCCccccCHHHHHHHHhcCCeEEEE-----
Confidence 45566652 1001237899999874445466666665443 368899999743112223333333444444332
Q ss_pred HHHHHHHHhCcEEEeCCC
Q 010448 367 PLAHMIIAGADFILIPSR 384 (510)
Q Consensus 367 ~~~~~~~~~adv~v~ps~ 384 (510)
+++.+.+..+|++...+.
T Consensus 300 ~d~~eav~~ADVVYt~~~ 317 (429)
T PRK11891 300 DDLAAGLRGADVVYATRI 317 (429)
T ss_pred cCHHHHhCCCCEEEEcCc
Confidence 233357999999988664
No 290
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=21.18 E-value=6.7e+02 Score=23.25 Aligned_cols=92 Identities=18% Similarity=0.195 Sum_probs=60.4
Q ss_pred HHHHhCCCCCCCCcEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCC-hhHHHHHHHHHHHCCCce-EEeccCCH
Q 010448 289 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYPEKA-RGVAKFNI 366 (510)
Q Consensus 289 ~~~~~g~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~-~~~~~~~~~l~~~~~~~v-~~~~~~~~ 366 (510)
+-+.+|+| ++....+-...+.++.|.+++..+ ++.-++.|.-. ...++.+++++.+++..+ ...++.++
T Consensus 54 ~Ae~~gi~------l~~~~~~g~~e~eve~L~~~l~~l---~~d~iv~GaI~s~yqk~rve~lc~~lGl~~~~PLWg~d~ 124 (223)
T COG2102 54 QAEAMGIP------LVTFDTSGEEEREVEELKEALRRL---KVDGIVAGAIASEYQKERVERLCEELGLKVYAPLWGRDP 124 (223)
T ss_pred HHHhcCCc------eEEEecCccchhhHHHHHHHHHhC---cccEEEEchhhhHHHHHHHHHHHHHhCCEEeecccCCCH
Confidence 34456664 444555557888999999999998 48888889754 445677888888887533 34445554
Q ss_pred -HHHHHHHHh-CcEEEeCCCCCCcc
Q 010448 367 -PLAHMIIAG-ADFILIPSRFEPCG 389 (510)
Q Consensus 367 -~~~~~~~~~-adv~v~ps~~E~~g 389 (510)
+.+.++... .++.|.....++++
T Consensus 125 ~ell~e~~~~Gf~~~Iv~Vsa~gL~ 149 (223)
T COG2102 125 EELLEEMVEAGFEAIIVAVSAEGLD 149 (223)
T ss_pred HHHHHHHHHcCCeEEEEEEeccCCC
Confidence 444455555 67777655444443
No 291
>PRK00124 hypothetical protein; Validated
Probab=21.10 E-value=3e+02 Score=23.78 Aligned_cols=83 Identities=14% Similarity=0.043 Sum_probs=46.2
Q ss_pred EEEEecCChhHHHHHHHHHHHCCCceEEeccCCHHHHHHHHHhCcEEEeCCCCCCccHHHHHHHHhCCCcEEecCCCccc
Q 010448 333 IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 412 (510)
Q Consensus 333 l~i~G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~adv~v~ps~~E~~g~~~~Eama~G~Pvv~s~~gg~~e 412 (510)
++|=|+.=+ .++.+.+.+.+++..+.+.-.++.......-......++++-.+.--..++|-..-|=-||+.|.|=...
T Consensus 3 I~VDADACP-Vk~~i~r~a~r~~i~v~~Vas~n~~~~~~~~~~v~~v~V~~g~D~AD~~Iv~~~~~gDiVIT~Di~LAa~ 81 (151)
T PRK00124 3 IYVDADACP-VKDIIIRVAERHGIPVTLVASFNHFLRVPYSPFIRTVYVDAGFDAADNEIVQLAEKGDIVITQDYGLAAL 81 (151)
T ss_pred EEEECCCCc-HHHHHHHHHHHHCCeEEEEEeCCcccCCCCCCceEEEEeCCCCChHHHHHHHhCCCCCEEEeCCHHHHHH
Confidence 334444322 6777777777777656554433322211011112345666666666677888888887777777665444
Q ss_pred eEEc
Q 010448 413 TVEE 416 (510)
Q Consensus 413 ~v~~ 416 (510)
.+..
T Consensus 82 ~l~K 85 (151)
T PRK00124 82 ALEK 85 (151)
T ss_pred HHHC
Confidence 4443
No 292
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=20.95 E-value=8.3e+02 Score=24.27 Aligned_cols=101 Identities=11% Similarity=0.022 Sum_probs=62.1
Q ss_pred EEEEecCcccccChhhHHHHHHhhhhCCcEEEEE-------------ecCChhHHHHHHHHHHHCCCceEEeccCCHHHH
Q 010448 303 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-------------GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 369 (510)
Q Consensus 303 ~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~-------------G~g~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~ 369 (510)
.++.+| ......-+.+++.++.+++-..++... |-|. +-.+.+.+...+.+..+. ...++.+.+
T Consensus 94 ~~~IAG-PCsiEs~e~~~~~A~~lk~~ga~~~r~~~fKpRTsp~sf~G~g~-~gL~~L~~~~~~~Gl~v~-tev~d~~~~ 170 (335)
T PRK08673 94 PVVIAG-PCSVESEEQILEIARAVKEAGAQILRGGAFKPRTSPYSFQGLGE-EGLKLLAEAREETGLPIV-TEVMDPRDV 170 (335)
T ss_pred eEEEEe-cCccCCHHHHHHHHHHHHHhchhhccCcEecCCCCCcccccccH-HHHHHHHHHHHHcCCcEE-EeeCCHHHH
Confidence 334455 334456778888888887644443332 2222 233456666677764343 334566666
Q ss_pred HHHHHhCcEEEeCCCC-CCccHHHHHHHHhCCCcEEecC
Q 010448 370 HMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVAST 407 (510)
Q Consensus 370 ~~~~~~adv~v~ps~~-E~~g~~~~Eama~G~Pvv~s~~ 407 (510)
..+...+|++-.+|+. ..+.+ +-++-..|+||+.+..
T Consensus 171 ~~l~~~vd~lqIgAr~~~N~~L-L~~va~~~kPViLk~G 208 (335)
T PRK08673 171 ELVAEYVDILQIGARNMQNFDL-LKEVGKTNKPVLLKRG 208 (335)
T ss_pred HHHHHhCCeEEECcccccCHHH-HHHHHcCCCcEEEeCC
Confidence 6666779999999986 44442 4445677999998874
No 293
>PF14359 DUF4406: Domain of unknown function (DUF4406)
Probab=20.91 E-value=1.5e+02 Score=23.18 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=25.4
Q ss_pred HHHHhCcEEEeCCCCCCccHHHHH---HHHhCCCcE
Q 010448 371 MIIAGADFILIPSRFEPCGLIQLH---AMRYGTVPI 403 (510)
Q Consensus 371 ~~~~~adv~v~ps~~E~~g~~~~E---ama~G~Pvv 403 (510)
.++..||.+++..-||.+.-+-+| |...|++|+
T Consensus 55 ~~L~~cD~i~~l~gWe~S~GA~~E~~~A~~lGl~V~ 90 (92)
T PF14359_consen 55 AMLSDCDAIYMLPGWENSRGARLEHELAKKLGLPVI 90 (92)
T ss_pred HHHHhCCEEEEcCCcccCcchHHHHHHHHHCCCeEe
Confidence 367899999998888776666555 667788876
No 294
>PRK13243 glyoxylate reductase; Reviewed
Probab=20.40 E-value=3.5e+02 Score=26.79 Aligned_cols=42 Identities=14% Similarity=0.224 Sum_probs=27.1
Q ss_pred HHHHHHhCcEEEeCCC--CCC---ccHHHHHHHHhCCCcEEecCCCc
Q 010448 369 AHMIIAGADFILIPSR--FEP---CGLIQLHAMRYGTVPIVASTGGL 410 (510)
Q Consensus 369 ~~~~~~~adv~v~ps~--~E~---~g~~~~Eama~G~Pvv~s~~gg~ 410 (510)
..++++.||++++..- .|+ ++-..+++|--|.-+|-+..|++
T Consensus 198 l~ell~~aDiV~l~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~~ 244 (333)
T PRK13243 198 LEELLRESDFVSLHVPLTKETYHMINEERLKLMKPTAILVNTARGKV 244 (333)
T ss_pred HHHHHhhCCEEEEeCCCChHHhhccCHHHHhcCCCCeEEEECcCchh
Confidence 4468999999877532 233 44457777777776666555554
No 295
>cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1, 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association.
Probab=20.15 E-value=4.8e+02 Score=23.43 Aligned_cols=51 Identities=18% Similarity=0.260 Sum_probs=31.8
Q ss_pred cEEEEecCcccccChhhHHHHHHhhhhCCcEEEEEecCCh-hHHHHHHHHHHH
Q 010448 302 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK-PMEKQLEQLEIL 353 (510)
Q Consensus 302 ~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~-~~~~~~~~l~~~ 353 (510)
-+++++|..... ....+.++++++++.++++.++|=|.. .-.+.++.+...
T Consensus 109 rivi~v~S~~~~-d~~~i~~~~~~lkk~~I~v~vI~~G~~~~~~~~l~~~~~~ 160 (187)
T cd01452 109 RIVAFVGSPIEE-DEKDLVKLAKRLKKNNVSVDIINFGEIDDNTEKLTAFIDA 160 (187)
T ss_pred eEEEEEecCCcC-CHHHHHHHHHHHHHcCCeEEEEEeCCCCCCHHHHHHHHHH
Confidence 467777777332 122466888888888999888887642 223445555444
No 296
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=20.12 E-value=1.9e+02 Score=28.45 Aligned_cols=46 Identities=13% Similarity=0.356 Sum_probs=32.0
Q ss_pred cccChhhHHHHHHhhhhCCcEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 010448 312 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 360 (510)
Q Consensus 312 ~~Kg~~~li~a~~~l~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~v~~ 360 (510)
.+||. .+..++.+. ++.+|+++|+..+.-.+.+.+.+.+++++|..
T Consensus 262 ~rK~~-~l~nil~~~--p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~ 307 (373)
T COG4850 262 ARKGQ-SLRNILRRY--PDRKFVLVGDSGEHDPEIYAEMVRCFPNRILG 307 (373)
T ss_pred hhccc-HHHHHHHhC--CCceEEEecCCCCcCHHHHHHHHHhCccceee
Confidence 35553 444466665 79999999986544556678888888887753
Done!