Query 010456
Match_columns 510
No_of_seqs 168 out of 782
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 07:12:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010456.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010456hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f9m_A Glucokinase; hexokinase 100.0 7E-130 2E-134 1039.1 42.2 442 38-504 16-466 (470)
2 3hm8_A Hexokinase-3; glucose, 100.0 6E-126 2E-130 1001.9 42.2 432 42-503 5-441 (445)
3 3o8m_A Hexokinase; rnaseh-like 100.0 8E-123 3E-127 990.9 44.5 446 34-503 18-474 (485)
4 1bdg_A Hexokinase; phosphotran 100.0 2E-109 8E-114 885.6 43.8 438 36-501 5-449 (451)
5 2yhx_A Hexokinase B; transfera 100.0 2E-105 7E-110 854.7 41.1 435 40-504 6-448 (457)
6 1cza_N Hexokinase type I; stru 100.0 1E-103 5E-108 903.9 44.4 439 41-504 468-913 (917)
7 1cza_N Hexokinase type I; stru 100.0 4.9E-88 1.7E-92 775.2 40.7 438 38-502 17-463 (917)
8 2qm1_A Glucokinase; alpha-beta 99.8 4.9E-18 1.7E-22 172.3 26.1 306 97-497 6-320 (326)
9 1z05_A Transcriptional regulat 99.8 1.5E-17 5E-22 176.1 29.0 342 46-497 59-414 (429)
10 1z6r_A MLC protein; transcript 99.8 1.8E-17 6.2E-22 173.9 26.6 346 45-496 35-391 (406)
11 2hoe_A N-acetylglucosamine kin 99.8 4.1E-17 1.4E-21 170.1 25.9 325 45-497 38-370 (380)
12 3vgl_A Glucokinase; ROK family 99.8 5.1E-17 1.7E-21 165.5 24.6 301 97-497 2-311 (321)
13 3r8e_A Hypothetical sugar kina 99.8 4E-17 1.4E-21 166.2 21.8 294 95-496 17-317 (321)
14 3vov_A Glucokinase, hexokinase 99.8 8.7E-17 3E-21 162.6 23.4 287 98-497 2-294 (302)
15 2ap1_A Putative regulator prot 99.7 1.2E-16 4.1E-21 162.7 21.2 290 97-496 24-324 (327)
16 4db3_A Glcnac kinase, N-acetyl 99.7 4.4E-16 1.5E-20 159.2 23.5 293 98-496 25-324 (327)
17 4htl_A Beta-glucoside kinase; 99.7 8.1E-16 2.8E-20 155.0 22.9 279 98-497 5-290 (297)
18 2yhw_A Bifunctional UDP-N-acet 99.7 1.9E-15 6.5E-20 154.9 25.8 304 96-498 29-338 (343)
19 2aa4_A Mannac kinase, putative 99.7 5.3E-16 1.8E-20 154.9 16.9 278 98-496 2-286 (289)
20 3mcp_A Glucokinase; structural 99.7 9.1E-15 3.1E-19 152.0 23.5 271 95-482 7-298 (366)
21 2ch5_A NAGK protein; transfera 99.6 2.6E-14 8.9E-19 146.2 24.2 302 98-498 7-324 (347)
22 2gup_A ROK family protein; sug 99.6 9.1E-15 3.1E-19 146.3 19.9 276 98-498 5-287 (292)
23 3htv_A D-allose kinase, alloki 99.6 2.7E-14 9.2E-19 145.0 19.8 285 95-497 5-298 (310)
24 2q2r_A Glucokinase 1, putative 99.6 2.3E-14 7.9E-19 148.8 16.3 294 97-497 29-370 (373)
25 3epq_A Putative fructokinase; 99.5 1.1E-13 3.9E-18 140.0 15.5 269 98-497 4-288 (302)
26 1sz2_A Glucokinase, glucose ki 99.5 1E-12 3.6E-17 134.2 21.1 290 96-497 13-325 (332)
27 1woq_A Inorganic polyphosphate 99.4 2E-12 6.7E-17 128.1 16.0 249 93-500 8-263 (267)
28 2e2o_A Hexokinase; acetate and 99.3 4E-11 1.4E-15 120.1 19.8 274 98-498 3-287 (299)
29 1zbs_A Hypothetical protein PG 99.3 3.3E-11 1.1E-15 120.8 16.7 125 99-263 2-126 (291)
30 1zxo_A Conserved hypothetical 99.2 3.5E-12 1.2E-16 127.9 5.0 120 99-263 2-124 (291)
31 1saz_A Probable butyrate kinas 99.2 7.9E-11 2.7E-15 122.8 14.2 289 98-496 3-346 (381)
32 1zc6_A Probable N-acetylglucos 99.2 2.6E-10 8.8E-15 114.9 16.3 126 98-263 12-139 (305)
33 3lm2_A Putative kinase; struct 99.0 7.6E-10 2.6E-14 107.5 8.3 126 95-264 4-130 (226)
34 3ifr_A Carbohydrate kinase, FG 96.2 0.018 6.1E-07 61.8 10.8 84 95-185 5-95 (508)
35 4e1j_A Glycerol kinase; struct 95.9 0.029 1E-06 60.3 10.3 79 98-183 27-112 (520)
36 2p3r_A Glycerol kinase; glycer 95.7 0.041 1.4E-06 59.0 10.5 64 95-161 1-67 (510)
37 2itm_A Xylulose kinase, xylulo 95.4 0.063 2.1E-06 57.0 10.7 78 99-185 2-86 (484)
38 3g25_A Glycerol kinase; IDP007 95.4 0.056 1.9E-06 57.7 10.3 61 98-161 7-70 (501)
39 2dpn_A Glycerol kinase; thermu 95.2 0.076 2.6E-06 56.5 10.5 80 98-184 3-89 (495)
40 2zf5_O Glycerol kinase; hypert 95.0 0.092 3.1E-06 56.0 10.5 61 98-161 4-67 (497)
41 3h3n_X Glycerol kinase; ATP-bi 94.9 0.11 3.8E-06 55.5 11.0 62 97-161 5-69 (506)
42 2w40_A Glycerol kinase, putati 94.9 0.1 3.5E-06 55.7 10.5 80 98-184 5-93 (503)
43 3ezw_A Glycerol kinase; glycer 94.9 0.051 1.7E-06 58.5 8.1 77 94-177 1-80 (526)
44 2d4w_A Glycerol kinase; alpha 94.4 0.092 3.1E-06 56.1 8.8 80 98-184 3-89 (504)
45 3hz6_A Xylulokinase; xylulose, 94.3 0.18 6.1E-06 54.0 10.6 57 98-157 6-65 (511)
46 3l0q_A Xylulose kinase; xlylul 94.1 0.079 2.7E-06 57.3 7.5 62 97-161 5-69 (554)
47 3ll3_A Gluconate kinase; xylul 94.0 0.11 3.9E-06 55.4 8.5 60 98-160 5-67 (504)
48 3jvp_A Ribulokinase; PSI-II, N 93.8 0.1 3.5E-06 56.7 7.8 61 98-161 6-81 (572)
49 2uyt_A Rhamnulokinase; rhamnos 93.0 0.48 1.6E-05 50.1 11.2 84 98-194 5-97 (489)
50 3h6e_A Carbohydrate kinase, FG 91.8 0.19 6.7E-06 53.4 6.2 57 98-157 7-65 (482)
51 3i8b_A Xylulose kinase; strain 90.5 0.9 3.1E-05 48.6 9.8 53 97-155 5-58 (515)
52 3bex_A Type III pantothenate k 88.4 0.62 2.1E-05 45.2 6.1 171 98-327 4-194 (249)
53 3h1q_A Ethanolamine utilizatio 84.5 21 0.00072 33.8 14.7 29 212-242 110-138 (272)
54 3djc_A Type III pantothenate k 82.6 1.6 5.3E-05 42.9 5.7 49 98-160 3-51 (266)
55 4ehu_A Activator of 2-hydroxyi 80.2 10 0.00035 36.3 10.6 47 446-501 210-257 (276)
56 4gni_A Putative heat shock pro 77.7 17 0.00056 36.9 11.9 33 209-243 165-197 (409)
57 3i33_A Heat shock-related 70 k 76.9 18 0.00061 36.5 11.8 32 209-242 173-204 (404)
58 3qfu_A 78 kDa glucose-regulate 76.0 15 0.00052 36.7 10.9 32 209-242 168-199 (394)
59 2h3g_X Biosynthetic protein; p 72.6 6.1 0.00021 38.6 6.6 44 99-151 2-45 (268)
60 3ezw_A Glycerol kinase; glycer 70.7 11 0.00038 40.1 8.7 48 445-501 405-452 (526)
61 4bc3_A Xylulose kinase; transf 65.8 10 0.00034 40.6 7.1 46 446-500 438-483 (538)
62 3ifr_A Carbohydrate kinase, FG 63.2 24 0.00083 37.2 9.5 48 445-501 403-450 (508)
63 3jvp_A Ribulokinase; PSI-II, N 62.0 15 0.00052 39.5 7.7 50 444-501 441-490 (572)
64 3g25_A Glycerol kinase; IDP007 61.0 23 0.0008 37.2 8.8 48 445-501 407-454 (501)
65 3i8b_A Xylulose kinase; strain 60.0 23 0.00077 37.6 8.5 48 445-501 427-474 (515)
66 2p3r_A Glycerol kinase; glycer 58.7 24 0.00082 37.3 8.4 48 445-501 404-451 (510)
67 3h3n_X Glycerol kinase; ATP-bi 57.2 28 0.00095 36.7 8.6 48 445-501 406-453 (506)
68 2d4w_A Glycerol kinase; alpha 56.6 29 0.00099 36.5 8.6 48 445-501 406-453 (504)
69 3l0q_A Xylulose kinase; xlylul 56.2 39 0.0013 36.1 9.6 48 445-501 445-492 (554)
70 3ll3_A Gluconate kinase; xylul 56.0 31 0.001 36.4 8.7 48 445-501 396-443 (504)
71 1hux_A Activator of (R)-2-hydr 55.7 11 0.00038 36.4 4.8 46 446-500 212-258 (270)
72 3mdq_A Exopolyphosphatase; str 53.7 41 0.0014 33.2 8.7 62 98-159 5-68 (315)
73 2v7y_A Chaperone protein DNAK; 51.6 82 0.0028 33.0 11.2 43 211-255 126-168 (509)
74 4b9q_A Chaperone protein DNAK; 51.6 20 0.00068 38.9 6.5 83 393-501 302-384 (605)
75 2dpn_A Glycerol kinase; thermu 50.3 31 0.0011 36.2 7.5 46 446-500 402-447 (495)
76 2kho_A Heat shock protein 70; 48.1 87 0.003 33.8 10.9 127 97-256 2-196 (605)
77 2w40_A Glycerol kinase, putati 47.6 43 0.0015 35.2 8.1 47 446-501 411-457 (503)
78 3hi0_A Putative exopolyphospha 45.8 41 0.0014 35.6 7.7 62 97-158 15-78 (508)
79 4e1j_A Glycerol kinase; struct 43.9 59 0.002 34.4 8.5 47 446-501 429-475 (520)
80 3nuw_A 2-OXO-3-deoxygalactonat 43.5 23 0.00077 35.1 4.8 25 98-126 7-31 (295)
81 2fsj_A Hypothetical protein TA 43.5 36 0.0012 33.9 6.5 52 95-155 188-239 (346)
82 1t6c_A Exopolyphosphatase; alp 43.4 52 0.0018 32.5 7.6 62 98-159 13-76 (315)
83 2itm_A Xylulose kinase, xylulo 41.3 56 0.0019 34.0 7.8 47 446-501 390-437 (484)
84 3h6e_A Carbohydrate kinase, FG 40.7 37 0.0013 35.7 6.3 47 445-500 390-437 (482)
85 2i7n_A Pantothenate kinase 1; 37.1 64 0.0022 32.8 7.1 79 393-496 279-358 (360)
86 1yuw_A Heat shock cognate 71 k 36.9 2.5E+02 0.0085 29.7 12.2 128 97-257 4-204 (554)
87 2zf5_O Glycerol kinase; hypert 36.2 65 0.0022 33.7 7.3 47 446-501 397-443 (497)
88 3t69_A Putative 2-dehydro-3-de 35.9 21 0.00073 35.9 3.3 53 98-157 8-60 (330)
89 2ych_A Competence protein PILM 35.6 58 0.002 32.3 6.5 32 207-240 150-181 (377)
90 4a2a_A Cell division protein F 34.5 3.7E+02 0.013 27.3 12.7 31 208-240 168-198 (419)
91 2uyt_A Rhamnulokinase; rhamnos 34.0 95 0.0032 32.2 8.1 46 445-500 396-441 (489)
92 1u6z_A Exopolyphosphatase; alp 33.5 95 0.0032 32.8 8.1 62 98-159 12-75 (513)
93 3hz6_A Xylulokinase; xylulose, 33.2 71 0.0024 33.6 7.0 48 445-501 405-453 (511)
94 4bc3_A Xylulose kinase; transf 32.4 66 0.0023 34.1 6.7 31 98-131 11-41 (538)
95 3cer_A Possible exopolyphospha 30.2 96 0.0033 31.0 7.1 63 98-160 17-82 (343)
96 3vth_A Hydrogenase maturation 29.5 1.3E+02 0.0046 33.5 8.7 51 444-500 695-749 (761)
97 1hjr_A Holliday junction resol 27.6 1.2E+02 0.0043 26.8 6.6 22 98-119 2-23 (158)
98 1hux_A Activator of (R)-2-hydr 26.7 1.2E+02 0.004 28.9 6.8 26 98-126 4-29 (270)
99 2ews_A Pantothenate kinase; PA 26.3 2.3E+02 0.008 27.5 8.9 53 394-469 211-263 (287)
100 3tai_A DNA double-strand break 24.7 68 0.0023 33.4 4.7 49 51-103 23-71 (471)
101 1mul_A NS2, HU-2, DNA binding 20.9 1.4E+02 0.0048 23.4 5.1 35 41-75 5-39 (90)
No 1
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=100.00 E-value=6.6e-130 Score=1039.10 Aligned_cols=442 Identities=34% Similarity=0.583 Sum_probs=405.3
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCCcceeecccccCCCCccceeEEEEEeCCceeEEEEEE
Q 010456 38 RVMGVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASEG--GSKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQ 115 (510)
Q Consensus 38 ~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~l~MlPs~v~~lPtG~E~G~~LalDlGGTN~RV~~V~ 115 (510)
...+-++++.++|.++.++|++|+++|.+||++||++++ +|+++||||||+++|+|+|+|+|||||||||||||++|+
T Consensus 16 ~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~~~MlPTyV~~lP~G~E~G~fLAlDlGGTNfRV~~V~ 95 (470)
T 3f9m_A 16 MKKEKVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVK 95 (470)
T ss_dssp HHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTCSSCCEEEEEESSCCCCCCEEEEEEEESSSEEEEEEEE
T ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhcccCCCCCCcccccCccccCCCCCcceEEEEEEecCceEEEEEEE
Confidence 345556667777789999999999999999999999764 488999999999999999999999999999999999999
Q ss_pred EcCCc--ceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceeeeecccccccCCceEEE
Q 010456 116 LGGQR--SSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILI 193 (510)
Q Consensus 116 l~g~~--~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFPv~q~si~~g~Li 193 (510)
|.|++ .+.++..+++|+||+++|.+++++||||||+||++|+++++.. .+++||||||||||+|+++++|+|+
T Consensus 96 L~g~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~~-----~~~lpLGfTFSFP~~Q~sl~~g~Li 170 (470)
T 3f9m_A 96 VGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMK-----HKKLPLGFTFSFPVRHEDIDKGILL 170 (470)
T ss_dssp EEC----CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTCS-----SSCCEEEEEECSCEEEEETTEEEEC
T ss_pred ECCCCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhcccc-----ccccceEEEEeccccccCCCceEEE
Confidence 98764 3356666778999999999999999999999999999987632 4689999999999999999999999
Q ss_pred ecccceecCCCCCchHHHHHHHHHHhcC-CCceEEEEEechHHHHhccccCCCCceEEEEeeCCcceeeEcccCcccccc
Q 010456 194 KWTKGFAIESMVGQEVTESLQRALDKRG-LDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGTNACYLERTDAIIKCQ 272 (510)
Q Consensus 194 ~wtKgF~~~~~~G~dv~~lL~~al~r~~-l~v~V~alvNDTVgTlla~ay~~~~~~iglIlGTGtNa~Y~e~~~~I~k~~ 272 (510)
+|||||++++++|+||+++|++|++|++ ++|+|+||+|||||||++++|.+++|.||+|+|||||+||+|++++|+|++
T Consensus 171 ~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~~~~iGlI~GTGtNa~Y~E~~~~I~k~~ 250 (470)
T 3f9m_A 171 NWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVE 250 (470)
T ss_dssp CCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSS
T ss_pred eccccccCCCcCCccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCCCceEEEEEecCCceEEeeecccccccc
Confidence 9999999999999999999999999998 799999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcEEEeeccCCcCCCC---CCCCccccccccCCCCCCccchhhhccccchHHHHHHHHHHhhhcCCCCC-CCch
Q 010456 273 GLLTTSGGMVVNMEWGNFWSSH---LPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFG-PASS 348 (510)
Q Consensus 273 ~~~~~~~~miIN~EwG~f~~~~---lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl~~l~~~~~lF~-~~p~ 348 (510)
+ ..++||||||||+||+++ +|+|+||+++|++|+|||+|+||||+||||||||+|+||++|++++.||+ ..|+
T Consensus 251 ~---~~~~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~ 327 (470)
T 3f9m_A 251 G---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASE 327 (470)
T ss_dssp C---CSSEEEEECCGGGTTTTSTTGGGCCHHHHHHHHHSSSTTSCHHHHTTCHHHHHHHHHHHHHHHHHTTCSGGGCCCT
T ss_pred C---CCCcEEEeechhhcCCCcccCCCCCcccHHHhhcCCCCCceeeccccchhhHHHHHHHHHHHHHHhCcCcCCCCcH
Confidence 7 567899999999999764 57999999999999999999999999999999999999999999999998 8899
Q ss_pred hhccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 010456 349 RLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAAGIVGILKKIGRDGSG 428 (510)
Q Consensus 349 ~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa~iaaIl~~~~~~~~~ 428 (510)
+|.+||+|+|++||.|++|++++ +.+..++++ |+++ ++.+|+++||+||++|++|||+|+||+|+||++++++....
T Consensus 328 ~L~~~~~l~T~~ls~ie~d~~~~-~~~~~il~~-l~~~-~~~~d~~~vr~i~~~V~~RaA~L~Aa~iaail~k~~~~~~~ 404 (470)
T 3f9m_A 328 QLRTRGAFETRFVSQVESDTGDR-KQIYNILST-LGLR-PSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRSE 404 (470)
T ss_dssp TTTSTTCSCHHHHHHHHTCCSSC-HHHHHHHHH-TTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred HhcCCCCcCchHHhhhccCCCch-HHHHHHHHh-cCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999999999999999999998 888889876 8996 66799999999999999999999999999999999864321
Q ss_pred CCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhccccc
Q 010456 429 GISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSSYSV 504 (510)
Q Consensus 429 ~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~~~~ 504 (510)
...+++||+|||+|+|||.|+++++++++++++ .++|+|.+++||||+|||++||++++...
T Consensus 405 -----------~~~~~~VgvDGsv~~~yp~f~~~~~~~l~~l~~---~~~v~l~~a~DGSg~GAAliAa~a~~~~~ 466 (470)
T 3f9m_A 405 -----------DVMRITVGVDGSVYKLHPSFKERFHASVRRLTP---SCEITFIESEEGSGRGAALVSAVACKKAC 466 (470)
T ss_dssp -----------SSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCT---TEEEEEEECSSHHHHHHHHHHHHHTC---
T ss_pred -----------cccceEEEEeccHHHhCchHHHHHHHHHHHHcC---CCeEEEEEcCCCcHHHHHHHHHHHHHHHH
Confidence 246799999999999999999999999999985 47899999999999999999999998543
No 2
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.6e-126 Score=1001.93 Aligned_cols=432 Identities=37% Similarity=0.607 Sum_probs=398.9
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCccceeEEEEEeCCceeEEEEEEEcCCcc
Q 010456 42 VLRELEEGCETTVSRLRQVVDAMAVEMHAGLASEGGSKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQLGGQRS 121 (510)
Q Consensus 42 ~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~lPtG~E~G~~LalDlGGTN~RV~~V~l~g~~~ 121 (510)
.++++.++|.++.++|++|+++|..||++||++++ |+++||||||+++|+|+|+|+|||||||||||||++|+|.|.
T Consensus 5 ~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~-s~~~MlPtyv~~~P~G~E~G~~LAlDlGGTn~RV~~V~l~g~-- 81 (445)
T 3hm8_A 5 LLEETLAPFRLNHDQLAAVQAQMRKAMAKGLRGEA-SSLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVRVTTG-- 81 (445)
T ss_dssp HHHHHHGGGSCCHHHHHHHHHHHHHHHHHHHHTSC-CSSCCEECCCCSSCCSCCCEEEEEEEESSSSEEEEEEEESSS--
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCccCCCCCCCCCCCceeeEEEEEEecCCeEEEEEEEECCc--
Confidence 34556666679999999999999999999999865 889999999999999999999999999999999999999764
Q ss_pred eeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceeeeecccccccCCceEEEecccceec
Q 010456 122 SILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILIKWTKGFAI 201 (510)
Q Consensus 122 ~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFPv~q~si~~g~Li~wtKgF~~ 201 (510)
++..+++|+||+++|.+++++||||||+||++|+++++.. ++++|||||||||++|+++++|+|++|||||++
T Consensus 82 --~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~~-----~~~lplGftFSFP~~Q~sl~~g~Li~wtKGF~~ 154 (445)
T 3hm8_A 82 --VQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLS-----GQSLPLGFTFSFPCRQLGLDQGILLNWTKGFKA 154 (445)
T ss_dssp --EEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCT-----TCCCCEEEEECSCEECSSTTCCEECCCCTTCCC
T ss_pred --eEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCcc-----cccCcceEEEeeeeEeccCCceEEEEeeccccC
Confidence 3344567999999999999999999999999999987532 467999999999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHHHhc-CCCceEEEEEechHHHHhccccCCCCceEEEEeeCCcceeeEcccCccccccCCCCCCCc
Q 010456 202 ESMVGQEVTESLQRALDKR-GLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGTNACYLERTDAIIKCQGLLTTSGG 280 (510)
Q Consensus 202 ~~~~G~dv~~lL~~al~r~-~l~v~V~alvNDTVgTlla~ay~~~~~~iglIlGTGtNa~Y~e~~~~I~k~~~~~~~~~~ 280 (510)
++++|+||+++|++|++|+ +++|+|+||+|||||||++++|.+++|.||+|+|||||+||+|++++|+|+++ ..++
T Consensus 155 ~~~~G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~~~~iglIlGTGtNa~y~e~~~~i~k~~~---~~~~ 231 (445)
T 3hm8_A 155 SDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPG---DSGR 231 (445)
T ss_dssp BTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSCC---CSSE
T ss_pred CCCCCCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCCCceEEEEEeCCceEEEEEecccccccCC---CCCc
Confidence 9999999999999999998 58999999999999999999999999999999999999999999999999976 4578
Q ss_pred EEEeeccCCcCCCCC---CCCccccccccCCCCCCccchhhhccccchHHHHHHHHHHhhhcCCCCC-CCchhhccCCCC
Q 010456 281 MVVNMEWGNFWSSHL---PRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFG-PASSRLSMAFIL 356 (510)
Q Consensus 281 miIN~EwG~f~~~~l---p~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl~~l~~~~~lF~-~~p~~l~~~~~l 356 (510)
||||||||+||++++ |+|+||+++|++|.|||+|+||||+||||||||+|++|++|++++.||+ .+|++|.+||+|
T Consensus 232 miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~~PG~q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~~L~~~~~l 311 (445)
T 3hm8_A 232 MCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFRGQQIQRLQTRDIF 311 (445)
T ss_dssp EEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTGGGTSHHHHHHHHHHHHHHHHHHTSSGGGCCCGGGGSTTCS
T ss_pred EEEEcchhhcCCCCCCcCCCCccchHHhcCCCCCCceEeeeecchhhHHHHHHHHHHHHHHcCCCCCCCCcHHHcCCCCC
Confidence 999999999998764 8999999999999999999999999999999999999999999999998 899999999999
Q ss_pred ChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCc
Q 010456 357 RTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAAGIVGILKKIGRDGSGGISSGRSR 436 (510)
Q Consensus 357 ~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa~iaaIl~~~~~~~~~~~~~~~~~ 436 (510)
+|++||.|++|++ ++..+..+|++ |++ .++.+|+++||+||++|++|||+|+||+|+||++|+++....
T Consensus 312 ~T~~ls~ie~D~~-~~~~~~~~l~~-l~~-~~t~~d~~~vr~i~~~V~~RaA~L~Aa~iaai~~k~~~~~~~-------- 380 (445)
T 3hm8_A 312 KTKFLSEIESDSL-ALRQVRAILED-LGL-PLTSDDALMVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRGL-------- 380 (445)
T ss_dssp CHHHHHHHTCTTC-CHHHHHHHHHT-TTC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------
T ss_pred CcHHHHHHhcCCc-hHHHHHHHHHH-hCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--------
Confidence 9999999999865 58888889976 999 589999999999999999999999999999999999764321
Q ss_pred cccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhcccc
Q 010456 437 SDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSSYS 503 (510)
Q Consensus 437 ~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~~~ 503 (510)
...+++||+|||+|++||.|++++++++++++++ ++|+|.+++||||+|||++||++++..
T Consensus 381 ---~~~~~~VgvDGsvy~~~P~f~~~l~~~l~~l~~~---~~v~~~~s~DGSg~GAAl~AA~a~~~~ 441 (445)
T 3hm8_A 381 ---EELAVSVGVDGTLYKLHPRFSSLVAATVRELAPR---CVVTFLQSEDGSGKGAALVTAVACRLA 441 (445)
T ss_dssp ---SSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCTT---EEEEEEECSSCHHHHHHHHHHHHHHHH
T ss_pred ---cccCcEEEEeceehccChhHHHHHHHHHHHhCCC---CcEEEEECCCCchHHHHHHHHHHHHHH
Confidence 2357999999999999999999999999999874 689999999999999999999998743
No 3
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=100.00 E-value=8.2e-123 Score=990.92 Aligned_cols=446 Identities=37% Similarity=0.614 Sum_probs=415.0
Q ss_pred hhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCccceeEEEEEeCCceeEEEE
Q 010456 34 RKWKRVMGVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASEGGSKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLR 113 (510)
Q Consensus 34 ~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~lPtG~E~G~~LalDlGGTN~RV~~ 113 (510)
+.+.++++.+++++++|.++.++|++|+++|..||++||++++ ++++||||||+++|+|+|+|.|||||||||||||++
T Consensus 18 ~~~~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~-~~~~MlPt~V~~lP~G~E~G~~LalDlGGTn~Rv~~ 96 (485)
T 3o8m_A 18 DVPANLMEQIHGLETLFTVSSEKMRSIVKHFISELDKGLSKKG-GNIPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVL 96 (485)
T ss_dssp TSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHSSSC-CSSCCEECCCCSCCCSCCEEEEEEEEESSSEEEEEE
T ss_pred cCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCcccCCCCCCCCCCCcceEEEEEEecCCeEEEEE
Confidence 3556788899999999999999999999999999999999764 689999999999999999999999999999999999
Q ss_pred EEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceeeeecccccccCCceEEE
Q 010456 114 VQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILI 193 (510)
Q Consensus 114 V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFPv~q~si~~g~Li 193 (510)
|++.|++. .+...++|+||++++.+++++||||||+||.+|++++..+. ..+.++||||||||++|+++++|+|+
T Consensus 97 V~l~g~~~--~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~---~~~~l~lGftfSfP~~q~~i~~g~li 171 (485)
T 3o8m_A 97 VKLGGNHD--FDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDG---VSEPLPLGFTFSYPASQKKINSGVLQ 171 (485)
T ss_dssp EEEESSSC--EEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTC---CSSCEEEEEEECSCEECSBTTCCEEC
T ss_pred EEECCCCc--eEEEEEEEecCchhccCCHHHHHHHHHHHHHHHHHHhcccc---cccccceEEEEeeeEEEcccCCEEEe
Confidence 99987643 23334579999999999999999999999999999876432 24579999999999999999999999
Q ss_pred ecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhccccCCCCceEEEEeeCCcceeeEcccCccccccC
Q 010456 194 KWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGTNACYLERTDAIIKCQG 273 (510)
Q Consensus 194 ~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~~~~~~iglIlGTGtNa~Y~e~~~~I~k~~~ 273 (510)
+|||||++++++|+||+++|+++++|+|+||+|+||+||||||||+++|.++++.||+|+|||||+||+|+.++|+|+++
T Consensus 172 ~wtKGF~i~~~~G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~~~~~iglIlGTG~N~~y~e~~~~i~k~~~ 251 (485)
T 3o8m_A 172 RWTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEG 251 (485)
T ss_dssp CCCTTCCCBTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCGGGTT
T ss_pred eccccccCCCcCCccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCCCCcEEEEEEecCcceEEEeeccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred ----CCCCCCcEEEeeccCCcCCC--CCCCCccccccccCCCCCCccchhhhccccchHHHHHHHHHHhhhcCCCCC-CC
Q 010456 274 ----LLTTSGGMVVNMEWGNFWSS--HLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFG-PA 346 (510)
Q Consensus 274 ----~~~~~~~miIN~EwG~f~~~--~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl~~l~~~~~lF~-~~ 346 (510)
..+.+++||||||||+||+. .+|+|+||+++|++|.|||+|+||||+||||||||+|+||++|++++.||+ ..
T Consensus 252 ~~~~~~~~~~~miINtEwG~F~~~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlil~~l~~~~~lF~~~~ 331 (485)
T 3o8m_A 252 LLPEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQD 331 (485)
T ss_dssp TCCTTSCTTCEEEEECCGGGTTTTCSSSCCCHHHHHHHHHSSSTTSCHHHHHHSTTTHHHHHHHHHHHHHHTTSSSTTSC
T ss_pred cccccCCCCCcEEEEcccccCCCCcccCCCCchhhHHhhcCCCCCceeeccccccchHHHHHHHHHHHHHHcCcccCCCC
Confidence 33456789999999999876 489999999999999999999999999999999999999999999999998 88
Q ss_pred chhhccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 010456 347 SSRLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAAGIVGILKKIGRDG 426 (510)
Q Consensus 347 p~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa~iaaIl~~~~~~~ 426 (510)
|++|.+||+|+|++||.|++|++++++.+..+|++.|+++ ++.+|+++||+||++|++|||+|+||+|+||++++++
T Consensus 332 ~~~L~~~~~l~T~~ls~i~~d~~~~l~~~~~~l~~~l~~~-~t~~d~~~vr~i~~~V~~RAA~L~Aa~iaail~~~~~-- 408 (485)
T 3o8m_A 332 ISKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNIE-TTVVERKLIRKLAELVGTRAARLTVCGVSAICDKRGY-- 408 (485)
T ss_dssp CGGGGSTTCSCTHHHHHHHHCCCTTCHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred cHHhcCCCCcCcHHHHHHHcCCcchHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--
Confidence 9999999999999999999999999999999999999996 8999999999999999999999999999999999986
Q ss_pred CCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCC----cccEEEEEcCCcchHHHHHHHHHhccc
Q 010456 427 SGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDI----AQHVILKVTEDGSGIGAALLAASHSSY 502 (510)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~----~~~v~l~~s~DgSgiGAAl~Aa~~~~~ 502 (510)
.+++||+|||+|+|||.|+++++++++++++... .++|+|.+++||||+|||++||++++.
T Consensus 409 ---------------~~~~VgvdGSv~~~~P~f~~~~~~~l~~ll~~~~~~~~~~~v~l~~a~DGSg~GAAliAa~a~~~ 473 (485)
T 3o8m_A 409 ---------------KTAHIAADGSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPIQLVAAEDGSGVGAAIIACLTQKR 473 (485)
T ss_dssp ---------------SSEEEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSEEEEECCCTTTHHHHHHHHHHHHH
T ss_pred ---------------CceEEEEecChhccCccHHHHHHHHHHHHhccccccCCCceEEEEEcCCChHHHHHHHHHHHHHH
Confidence 4599999999999999999999999999997433 578999999999999999999999875
Q ss_pred c
Q 010456 503 S 503 (510)
Q Consensus 503 ~ 503 (510)
.
T Consensus 474 ~ 474 (485)
T 3o8m_A 474 L 474 (485)
T ss_dssp H
T ss_pred H
Confidence 3
No 4
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=100.00 E-value=2.2e-109 Score=885.56 Aligned_cols=438 Identities=36% Similarity=0.600 Sum_probs=406.3
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcC--CCCCCcceeecccccCCCCccceeEEEEEeCCceeEEEE
Q 010456 36 WKRVMGVLRELEEGCETTVSRLRQVVDAMAVEMHAGLAS--EGGSKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLR 113 (510)
Q Consensus 36 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~--~~~s~l~MlPs~v~~lPtG~E~G~~LalDlGGTN~RV~~ 113 (510)
++.+.+.+++|.++|.++.++|++|+++|..||++||++ +.+|+++||||||+++|+|+|+|.|||||||||||||++
T Consensus 5 ~~~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~ 84 (451)
T 1bdg_A 5 DQQLFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLS 84 (451)
T ss_dssp HHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEE
T ss_pred hHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcccCCCCCcccccccccCCCCCCCccceEEEEEeCCCeEEEEE
Confidence 445667889999999999999999999999999999984 335889999999999999999999999999999999999
Q ss_pred EEEcC-CcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceeeeecccccccCCceEE
Q 010456 114 VQLGG-QRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGIL 192 (510)
Q Consensus 114 V~l~g-~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFPv~q~si~~g~L 192 (510)
|++.| ++. .+...++|+||++++.+++++||||||+||.+|+++++.. .+.++||||||||++|+++++|+|
T Consensus 85 V~l~G~~~~--~~i~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~~~lG~tfsfPv~q~~~~~G~l 157 (451)
T 1bdg_A 85 VTLEGKGKS--PRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMK-----DKKFDLGFTFSFPCVQKGLTHATL 157 (451)
T ss_dssp EEECC-CCC--CEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCC-----SSCEEEEEEECSCEEEETTTEEEE
T ss_pred EecCCCCcc--eEEEEEEEecCCcccCCCHHHHHHHHHHHHHHHHHhcCCC-----ccccceEEEEeeEeccccCCCeEE
Confidence 99987 432 2223457999999999999999999999999999986532 346999999999999999999999
Q ss_pred EecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhccccCCCCceEEEEeeCCcceeeEcccCcccccc
Q 010456 193 IKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGTNACYLERTDAIIKCQ 272 (510)
Q Consensus 193 i~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~~~~~~iglIlGTGtNa~Y~e~~~~I~k~~ 272 (510)
++|||||++++++|+||+++|+++++|+++||+|+||+|||||||++++|.++++.||+|+|||+|+||+|+.+.|+|++
T Consensus 158 ~~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~~~~~iglIlGTG~na~yve~~~~i~~~~ 237 (451)
T 1bdg_A 158 VRWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMD 237 (451)
T ss_dssp CCCCTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCGGGC
T ss_pred eccccccCCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccCCCcEEEEEEeCCcceEEEEcCccccCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcEEEeeccCCcCCCC---CCCCccccccccCCCCCCccchhhhccccchHHHHHHHHHHhhhcCCCCC-CCch
Q 010456 273 GLLTTSGGMVVNMEWGNFWSSH---LPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFG-PASS 348 (510)
Q Consensus 273 ~~~~~~~~miIN~EwG~f~~~~---lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl~~l~~~~~lF~-~~p~ 348 (510)
+. +.++|+||+|||.||+++ +|+|+||..+|..|.|||+|+||||+||+||||++|++|+++.+++.+|. ..|+
T Consensus 238 g~--~~g~m~In~EwG~f~~~~~~~~p~t~~D~~lD~~s~~pg~q~~Ek~~SG~yLgel~R~~l~~~~~~~~lf~~~~~~ 315 (451)
T 1bdg_A 238 GV--KEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPE 315 (451)
T ss_dssp SC--SSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCS
T ss_pred CC--ccCcEEEecCcccCCCcccccCCCCcchhhhhhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccchH
Confidence 74 567899999999999876 89999999999999999999999999999999999999999999999998 8899
Q ss_pred hhccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 010456 349 RLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAAGIVGILKKIGRDGSG 428 (510)
Q Consensus 349 ~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa~iaaIl~~~~~~~~~ 428 (510)
+|.++|.|+|++||.|++|++++++.+..+++..++++.++.+|++++|++|++|++|||+++|++|++|++++++
T Consensus 316 ~l~~~~~l~t~~ls~i~~d~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~va~~V~~RaA~lla~~ia~i~~~~~~---- 391 (451)
T 1bdg_A 316 RLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACEMVVKRAAYLAGAGIACILRRINR---- 391 (451)
T ss_dssp GGGSTTCSCTTHHHHHTTCCTTCCHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred hhcCCCccchHHHhhhhccCccchHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----
Confidence 9999999999999999999999999999999887888766899999999999999999999999999999999976
Q ss_pred CCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhcc
Q 010456 429 GISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 429 ~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~ 501 (510)
.+++|++|||+|++||.|++++++++++++++ ..+|++.+++|||++|||++|+++++
T Consensus 392 -------------~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~--~~~i~~~l~~dgs~iGAAllA~~~~~ 449 (451)
T 1bdg_A 392 -------------SEVTVGVDGSLYKFHPKFCERMTDMVDKLKPK--NTRFCLRLSEDGSGKGAAAIAASCTR 449 (451)
T ss_dssp -------------SEEEEEEESHHHHHCTTHHHHHHHHHHHHSCT--TCEEEEEECTTHHHHHHHHHHTTC--
T ss_pred -------------CceEEEEeCchhcCchhHHHHHHHHHHHHhCC--CCcEEEEECCCccHHHHHHHHHHHhh
Confidence 46899999999999999999999999999876 56899999999999999999998876
No 5
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=100.00 E-value=2.2e-105 Score=854.72 Aligned_cols=435 Identities=19% Similarity=0.257 Sum_probs=399.5
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCccceeEEEEEeCCceeEEEEEEEcCC
Q 010456 40 MGVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASEGGSKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQLGGQ 119 (510)
Q Consensus 40 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~lPtG~E~G~~LalDlGGTN~RV~~V~l~g~ 119 (510)
++.+++|.++|.+|.++|++|+++|..||+ ||++++ |+++||||||+++|+|+|+|.|||||||||||||++|++.|+
T Consensus 6 ~~~~~~~~~~f~~~~~~L~~i~~~~~~em~-gL~~~~-~~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lV~~~G~ 83 (457)
T 2yhx_A 6 XSLVEVHXXVFIVPPXILQAVVSILTTRXD-DXDSSA-ASIPMVPGWVLKQVSGAQAGSFLAIVMGGGDLEVILISLAGR 83 (457)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-HHHSSS-CSSCCEECCCCCCCCSCCCEEEEEEEECSSEEEEEEEEEETT
T ss_pred HHHHHHHHhhhcCCHHHHHHHHHHHHHHhc-CCCCCC-CCCccCccccCCCCCCCccceEEEEEeCCCeEEEEEEEeCCC
Confidence 356777888888999999999999999999 998754 779999999999999999999999999999999999999875
Q ss_pred cceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceeeeecccccccCCceEEEecccce
Q 010456 120 RSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILIKWTKGF 199 (510)
Q Consensus 120 ~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFPv~q~si~~g~Li~wtKgF 199 (510)
.. .+...+++++|++++.+++++||||||++|.+|++++... ..+.+++|||||||++|+++++|+|++|||||
T Consensus 84 ~~--~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~----~~~~~~lGi~fs~P~~q~~~~~g~l~~wtKgf 157 (457)
T 2yhx_A 84 QE--SSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSS----XAGSVPLGFTFXEAGAKEXVIKGQITXQAXAF 157 (457)
T ss_dssp EE--EEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSS----CSSCEEEEEECCSCCCCSBTTCCBCSSCCTTC
T ss_pred ee--EEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHhhcccc----cccccceeeEEEEEEEEeecCceEEEeeccCC
Confidence 32 3334457999999899999999999999999999876422 13468999999999999999999999999999
Q ss_pred ecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhccccCCCCceEEEEeeCCcceeeEcccCccccccCCC-C-C
Q 010456 200 AIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGTNACYLERTDAIIKCQGLL-T-T 277 (510)
Q Consensus 200 ~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~~~~~~iglIlGTGtNa~Y~e~~~~I~k~~~~~-~-~ 277 (510)
++++++ ||+++|+++++|+++|++|++|+|||++|+++++|+++++.||+|+|||+|+||+++.++|+|+++.. + .
T Consensus 158 ~i~~~~--~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~~~~~iglilGTGvgg~~i~~~~~i~kl~~~~~~~~ 235 (457)
T 2yhx_A 158 SLAXLX--KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXGG 235 (457)
T ss_dssp CCSSCS--SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEECGGGSSCTTSCSSSCS
T ss_pred CcchhH--HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcCCccEEEEEECcEEEEEEEECCCccccccccccccc
Confidence 999998 99999999999999999999999999999999999999999999999999999999999999996531 3 4
Q ss_pred CCcEEEeeccCCcCCC--CCCCCccccccccCCCCCCccchhhhccccchHHHHHHHHHHhhhcCCCCCCCchhhccCCC
Q 010456 278 SGGMVVNMEWGNFWSS--HLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFGPASSRLSMAFI 355 (510)
Q Consensus 278 ~~~miIN~EwG~f~~~--~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl~~l~~~~~lF~~~p~~l~~~~~ 355 (510)
.+.|+||||||+|+++ .+|+|+||++||..|.||| |+||||+||||||||+|++|+++.+++.+|...|++|.+||+
T Consensus 236 ~g~~~in~EwG~f~~~~~~lp~t~~D~~lD~~s~~pG-q~fEkm~SG~yLGel~R~il~~~~~~~~lf~~~~~~l~~~~~ 314 (457)
T 2yhx_A 236 AGXMXICCDQSSFRKAFPSLPQIXYLXTLNXXSPXAX-KTFXKNSXAKNXGQSLRDVLMXFKXXGQXHXXXAXSFXAANV 314 (457)
T ss_dssp SCCEEEECCCTTTTTTCSSSCCCHHHHHHHHHSSCSC-CHHHHHHCGGGHHHHHHHHHHHHHHTTSSSSSCCCSCCSTTC
T ss_pred CCceEEEEEcccCCCCCCcCCccccccccccccCchH-HHHHHHhhhcCcHHHHHHHHHHHhcccccccccchhcccccC
Confidence 6889999999999975 4899999999999999999 999999999999999999999999998889768899999999
Q ss_pred CChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 010456 356 LRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAAGIVGILKKIGRDGSGGISSGRS 435 (510)
Q Consensus 356 l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa~iaaIl~~~~~~~~~~~~~~~~ 435 (510)
|+|++||.|++|++++++.+..++.+.++++ ++.+|+++||+||++|++|||+|+|++|++|++++++
T Consensus 315 ~~t~~ls~i~~d~~~~l~~~~~il~~~~~~~-~t~~D~~~v~~ia~~V~~RaA~l~A~~iaai~~~~~~----------- 382 (457)
T 2yhx_A 315 ENTSYPAKIQKLPHFDLRXXXDLFXGDQGIA-XKTXMKXVVRRXLFLIAAYAFRLVVCXIXAICQKKGY----------- 382 (457)
T ss_dssp SCTHHHHHHHHCCSSSCHHHHHHHHHHHTCC-CCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTC-----------
T ss_pred cChHHHHHHhcCCchhhhHHHHHHHHHhCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-----------
Confidence 9999999999999999999999998889986 6999999999999999999999999999999999976
Q ss_pred ccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCC----cccEEEEEcCCcchHHHHHHHHHhccccc
Q 010456 436 RSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDI----AQHVILKVTEDGSGIGAALLAASHSSYSV 504 (510)
Q Consensus 436 ~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~----~~~v~l~~s~DgSgiGAAl~Aa~~~~~~~ 504 (510)
++++|++|||+ ++||.|+++++++++++++++. .++|+|++++||||+|||++||+++++.+
T Consensus 383 ------~~~~V~vdGsv-~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~dgsg~GAAl~aa~~~~~~~ 448 (457)
T 2yhx_A 383 ------SSGHIAAXGSX-RSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAIDGXGAASXVIXSIASAXXS 448 (457)
T ss_dssp ------SSEEEEEESTT-TTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCCTTTHHHHHHHHHHHHHHH
T ss_pred ------CcEEEEEECCc-ccCchHHHHHHHHHHHhhCcccccccCcceEEEECCCchhhhHHHHHHHHhhhhh
Confidence 35899999999 9999999999999999997643 56899999999999999999999998744
No 6
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=1.4e-103 Score=903.92 Aligned_cols=439 Identities=37% Similarity=0.599 Sum_probs=399.0
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCC--CCCCcceeecccccCCCCccceeEEEEEeCCceeEEEEEEEcC
Q 010456 41 GVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASE--GGSKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQLGG 118 (510)
Q Consensus 41 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~--~~s~l~MlPs~v~~lPtG~E~G~~LalDlGGTN~RV~~V~l~g 118 (510)
+.++++.++|.++.++|++|+++|.+||++||+++ ..|+++||||||+++|+|+|+|.|||||||||||||++|++.+
T Consensus 468 ~~i~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~~~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V~l~~ 547 (917)
T 1cza_N 468 RQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRS 547 (917)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSSCCEECSCCSCCCSCCCEEEEEEEESSSSEEEEEEEEEC
T ss_pred hhHHHHHhhhcCCHHHHHHHHHHHHHHHHHHhcccCCCCCCCceECCCCCCCCCCCcceEEEEEEECCCcEEEEEEEeCC
Confidence 44567777778999999999999999999999854 3588999999999999999999999999999999999999964
Q ss_pred CcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceeeeecccccccCCceEEEecccc
Q 010456 119 QRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILIKWTKG 198 (510)
Q Consensus 119 ~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFPv~q~si~~g~Li~wtKg 198 (510)
.+.++++...++|+||++++.+++++||||||+||.+|+++++.. .+.++||||||||++|+++++|+|++||||
T Consensus 548 g~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~l~lG~tfsfPv~q~~i~~~~L~~WtKg 622 (917)
T 1cza_N 548 GKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIK-----GPRMPLGFTFSFPCQQTSLDAGILITWTKG 622 (917)
T ss_dssp STTCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCC-----SSCCEEEEEECSCEEEEETTEEEECCCCTT
T ss_pred CcceeEEeeeeEEecCcccccCCHHHHHHHHHHHHHHHHHHcCCC-----ccceeEEEEeeccccccccCccEECceecc
Confidence 333356556678999999999999999999999999999976532 346899999999999999999999999999
Q ss_pred eecCCCCCchHHHHHHHHHHhc-CCCceEEEEEechHHHHhccccCCCCceEEEEeeCCcceeeEcccCccccccCCCCC
Q 010456 199 FAIESMVGQEVTESLQRALDKR-GLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGTNACYLERTDAIIKCQGLLTT 277 (510)
Q Consensus 199 F~~~~~~G~dv~~lL~~al~r~-~l~v~V~alvNDTVgTlla~ay~~~~~~iglIlGTGtNa~Y~e~~~~I~k~~~~~~~ 277 (510)
|++++++|+||+++|+++++|+ +++|+|+||+|||||||++++|.++++.||+|+|||||+||+|+.++|+++.+ +
T Consensus 623 f~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~~~~iglIlGTG~na~y~e~~~~i~~~~g---~ 699 (917)
T 1cza_N 623 FKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---D 699 (917)
T ss_dssp CCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCTTSSC---C
T ss_pred cccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCCCcEEEEEEeCCeeEEEEEcCccccCcCC---C
Confidence 9999999999999999999987 79999999999999999999999999999999999999999999999999875 4
Q ss_pred CCcEEEeeccCCcCCCC---CCCCccccccccCCCCCCccchhhhccccchHHHHHHHHHHhhhcCCCCC-CCchhhccC
Q 010456 278 SGGMVVNMEWGNFWSSH---LPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFG-PASSRLSMA 353 (510)
Q Consensus 278 ~~~miIN~EwG~f~~~~---lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl~~l~~~~~lF~-~~p~~l~~~ 353 (510)
.++|+||+|||+||+++ +|+|+||+++|++|.|||+|+||||+||+||||++|++|+++.+++.+|. ..|++|.++
T Consensus 700 ~g~m~In~EwG~fg~~~~l~~~~T~~D~~~d~~s~~pG~q~~Ek~~SG~yLgel~R~il~~~~~~~~lf~~~~~~~l~~~ 779 (917)
T 1cza_N 700 QGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTR 779 (917)
T ss_dssp SSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTSTTTHHHHHHHHHHHHHHTTSSGGGCCCTTTTST
T ss_pred cCcEEEecccccCCCcccccCCCCchhhhhhhcCCCCCCCchHHhhhHhHHHHHHHHHHHHhcccccccccccchhhccC
Confidence 67899999999999875 58999999999999999999999999999999999999999999999998 788999999
Q ss_pred CCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCC
Q 010456 354 FILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAAGIVGILKKIGRDGSGGISSG 433 (510)
Q Consensus 354 ~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa~iaaIl~~~~~~~~~~~~~~ 433 (510)
+.|+|++||.|++|++ ++..+..+++. ++++ ++.+|++++|++|++|++|||+|+|++|++|+.++++...+
T Consensus 780 ~~~~t~~ls~ie~d~~-~~~~~~~i~~~-~~~~-~~~~D~~~~~~ia~~v~~RaA~l~a~~iaai~~~~~~~~~~----- 851 (917)
T 1cza_N 780 GIFETKFLSQIESDRL-ALLQVRAILQQ-LGLN-STCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGL----- 851 (917)
T ss_dssp TCSCHHHHHHHTCSSC-CHHHHHHHHHH-HTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----
T ss_pred CccchHHhhhhhcCcc-hhhHHHHHHHH-hCCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccc-----
Confidence 9999999999999987 46677788875 8884 79999999999999999999999999999999999763221
Q ss_pred CCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhccccc
Q 010456 434 RSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSSYSV 504 (510)
Q Consensus 434 ~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~~~~ 504 (510)
...+++|++|||+|++||.|+++++++++++.+ .++|.|.+++||||+|||++||++.+..+
T Consensus 852 ------~~~~~~V~vdGsv~~~~p~f~~~~~~~l~~l~~---~~~v~~~~~~dgsg~GAAl~aa~~~~~~~ 913 (917)
T 1cza_N 852 ------DRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSP---KCNVSFLLSEDGSGKGAALITAVGVRLRT 913 (917)
T ss_dssp ------SSEEEEEEEECHHHHHCTTHHHHHHHHHHHHST---TEEEEEEECSSCSHHHHHHHHHHHHHHHC
T ss_pred ------CccceEEEECCHHHHcCcHHHHHHHHHHHHhCC---CCceEEEEecCChHHHHHHHHHHHHHHHh
Confidence 234589999999999999999999999999975 35799999999999999999999987543
No 7
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=4.9e-88 Score=775.17 Aligned_cols=438 Identities=34% Similarity=0.568 Sum_probs=395.5
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCCcceeecccccCCCCccceeEEEEEeCCceeEEEEEE
Q 010456 38 RVMGVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASEG--GSKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQ 115 (510)
Q Consensus 38 ~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~l~MlPs~v~~lPtG~E~G~~LalDlGGTN~RV~~V~ 115 (510)
.+.+.+++|.++|.++.++|++|+++|..||++||+++. .|+++||||||+++|+|+|+|.|||||||||||||++|+
T Consensus 17 ~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lv~ 96 (917)
T 1cza_N 17 DQVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQ 96 (917)
T ss_dssp HHHHHHHHHTGGGSCCHHHHHHHHHHHHHHHHHHHCTTTGGGCSSCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCCCCCCcccccccccCCCCCCCCcceEEEEEeCCCeEEEEEEE
Confidence 344557889999999999999999999999999998754 478999999999999999999999999999999999999
Q ss_pred EcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceeeeecccccccCCceEEEec
Q 010456 116 LGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILIKW 195 (510)
Q Consensus 116 l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFPv~q~si~~g~Li~w 195 (510)
+.|++...++...+++++|++++.+++++||||||++|.+|+++++.. .+.+++|||||||++|+++++|+|++|
T Consensus 97 ~~G~~~~~i~~~~~~~~ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~-----~~~~~lGi~fs~P~~q~~~~~G~l~~w 171 (917)
T 1cza_N 97 VNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGFTFSFPCQQSKIDEAILITW 171 (917)
T ss_dssp EEEETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT-----TSCCCEEEEECSCEECSSTTCCEECCC
T ss_pred ecCCCcceEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHhcCCC-----CCcccEEEEEccccccCcCCceEEEec
Confidence 977533334334457999998888889999999999999999876432 235799999999999999999999999
Q ss_pred ccceecCCCCCchHHHHHHHHHHhcC-CCceEEEEEechHHHHhccccCCCCceEEEEeeCCcceeeEcccCccccccCC
Q 010456 196 TKGFAIESMVGQEVTESLQRALDKRG-LDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGTNACYLERTDAIIKCQGL 274 (510)
Q Consensus 196 tKgF~~~~~~G~dv~~lL~~al~r~~-l~v~V~alvNDTVgTlla~ay~~~~~~iglIlGTGtNa~Y~e~~~~I~k~~~~ 274 (510)
||||++++++|+||+++|++++.|++ +|+++++|+|||+||+++++|.++++.||+|+|||+|+||+++.++|+++.+.
T Consensus 172 tkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~~~~~iglilGTGvngg~i~~g~~i~~~~G~ 251 (917)
T 1cza_N 172 TKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGD 251 (917)
T ss_dssp CTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCTTSSCC
T ss_pred ccCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccCCCcEEEEEEECCcceEEEecCcccccccCC
Confidence 99999999999999999999999987 89999999999999999999999999999999999999999999999998763
Q ss_pred CCCCCcEEEeeccCCcCCCC---CCCCccccccccCCCCCCccchhhhccccchHHHHHHHHHHhhhcCCCCC-CCchhh
Q 010456 275 LTTSGGMVVNMEWGNFWSSH---LPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFG-PASSRL 350 (510)
Q Consensus 275 ~~~~~~miIN~EwG~f~~~~---lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl~~l~~~~~lF~-~~p~~l 350 (510)
.++|+||+|||.|++++ +|+|+||..+|..+.|||+|.||||+||+||||++|+++.++++++.+|. ..|+.|
T Consensus 252 ---~g~~~in~E~G~f~~~~~l~~~~t~~D~~~dc~~g~pg~g~~Ek~~SG~yLgel~r~~l~~~~~~~~~~~~~~~~~l 328 (917)
T 1cza_N 252 ---EGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPEL 328 (917)
T ss_dssp ---SSEEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCTTT
T ss_pred ---CCceEEeccccccCCccccccCCCccccccccCCcCCCccHhHHHhhhhhHHHHHHHHHHHhhccccccccccchhh
Confidence 56799999999998775 46999999999999999999999999999999999999999998888887 678899
Q ss_pred ccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCC
Q 010456 351 SMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAAGIVGILKKI--GRDGSG 428 (510)
Q Consensus 351 ~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa~iaaIl~~~--~~~~~~ 428 (510)
.+++.|+|+++|.++ |+++++..+..+++. +++. ++..|++.++.+|..|.+|+|+++|++|++|+.++ ++..
T Consensus 329 ~~~~~l~t~~vs~~~-~~~~~~~~~~~i~~~-~~~~-~~~~D~~~~~~~a~~v~~raa~llA~gia~ii~~l~~dp~~-- 403 (917)
T 1cza_N 329 LTRGKFNTSDVSAIE-KNKEGLHNAKEILTR-LGVE-PSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGT-- 403 (917)
T ss_dssp TSTTSSCHHHHHHHT-CTTTHHHHHHHHHHH-TTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred ccccccChHHHHHHh-cccccHHHHHHHHHH-hCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc--
Confidence 999999999999999 567889888888876 7885 79999999999999999999999999999999999 4421
Q ss_pred CCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhccc
Q 010456 429 GISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSSY 502 (510)
Q Consensus 429 ~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~~ 502 (510)
..++.+|++|||+|++||.|+++++++++++++. .+++|.+++|||++|||++||++++.
T Consensus 404 -----------~~~~~~IvigGgV~~~~~~~~~~l~~~l~~~~~~---~~~~i~~a~dgs~~GAA~laa~~~~l 463 (917)
T 1cza_N 404 -----------PRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPD---SDVRFLLSESGSGKGAAMVTAVAYRL 463 (917)
T ss_dssp -----------SSEEEEEEEECHHHHHCSSHHHHHHHHHHHHCTT---EEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred -----------cCcceEEEECCchhhccHHHHHHHHHHHHHhcCC---CceEEEEeccchHHHHHHHHHhHhhh
Confidence 1245899999999999999999999999999843 57999999999999999999998874
No 8
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=99.81 E-value=4.9e-18 Score=172.32 Aligned_cols=306 Identities=16% Similarity=0.186 Sum_probs=202.5
Q ss_pred eeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCcccccee
Q 010456 97 GIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGF 176 (510)
Q Consensus 97 G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGf 176 (510)
+.+|+||+|||++|++++++.|+ ++.+. .++.|.. .+.+++++.+++.|.+++++.+.. ..+...+|+
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~~igi 73 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGV---VQQKW--SIETNIL---EDGKHIVPSIIESIRHRIDLYNMK----KEDFVGIGM 73 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCCT---TTTTTHHHHHHHHHHHHHHHTTCC----GGGEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEEE--EEcCCCC---CCHHHHHHHHHHHHHHHHHHcCCC----ccceeEEEE
Confidence 57899999999999999998763 44332 2444432 246889999999999999875421 123567888
Q ss_pred eeecccccccCCceEEEecccceecCCCCCc-hHHHHHHHHHHhcCCCceEEEEEechHHHHhcccc----CCCCceEEE
Q 010456 177 TFSFPVKQTSVSSGILIKWTKGFAIESMVGQ-EVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY----HDEDTVAAV 251 (510)
Q Consensus 177 TFSFPv~q~si~~g~Li~wtKgF~~~~~~G~-dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay----~~~~~~igl 251 (510)
+++.|++. ++|+++. +.. + ++.+. ++.+.|++.+ ++|+ .|.||+.+..++..+ .+.+..+.+
T Consensus 74 ~~pG~vd~---~~g~v~~-~~~--l-~w~~~~~l~~~l~~~~---~~pv---~v~ND~~aaa~~e~~~g~~~~~~~~~~l 140 (326)
T 2qm1_A 74 GTPGSVDI---EKGTVVG-AYN--L-NWTTVQPVKEQIESAL---GIPF---ALDNDANVAALGERWKGAGENNPDVIFI 140 (326)
T ss_dssp EESSEEET---TTTEEEC-BGG--G-TBCSCBCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHSTTTTCSCEEEE
T ss_pred ecccceeC---CCCEEEe-cCC--C-CccCCchHHHHHHHHh---CCCE---EEecHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 88888873 4577664 322 2 46778 9999999988 7776 789999999998764 356789999
Q ss_pred EeeCCcceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCccccccccCCCCCCccchhhhccccchHHHHHH
Q 010456 252 IIGTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRR 331 (510)
Q Consensus 252 IlGTGtNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~ 331 (510)
++|||.+++++.+...+...++...+-++|.++.. | . . -.-.+. ..+|.++|+.+|-+.++.
T Consensus 141 ~~GtGiG~giv~~G~l~~G~~g~aGE~Gh~~~~~~-g-~------~--------c~cG~~--gcle~~~s~~~l~~~~~~ 202 (326)
T 2qm1_A 141 TLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPN-G-F------D--------CTCGKR--GCLETVSSATGVVRVARH 202 (326)
T ss_dssp EESSSEEEEEEETTEECCCSSSCTTCGGGSBSCTT-S-C------B--------CTTSSB--CBTHHHHSHHHHHHHHHH
T ss_pred EECCceEEEEEECCEEeecCCCcccccCcEEECCC-C-C------c--------CCCCCc--cchHhhhCHHHHHHHHHH
Confidence 99999999999876544444443333344443321 0 0 0 001122 389999999998776654
Q ss_pred HHHHhhhcCCCCCCCchhhccCCCCChhhhhhhcc-CCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010456 332 VILRMSEESDIFGPASSRLSMAFILRTPLMAAMHE-DDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARL 410 (510)
Q Consensus 332 vl~~l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~~-d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L 410 (510)
.+. .. ..++. +..+.. ....+.+.+.+..++ .+ ..|..+.+++++.
T Consensus 203 ~~~----~~----~~~~~-----------~~~~~~~~~~~~~~~v~~~a~~------gd--------~~a~~i~~~~~~~ 249 (326)
T 2qm1_A 203 LSE----EF----AGDSE-----------LKQAIDDGQDVSSKDVFEFAEK------GD--------HFALMVVDRVCFY 249 (326)
T ss_dssp HTT----TC----CSCCH-----------HHHHHHHTCCCCHHHHHHHHHT------TC--------HHHHHHHHHHHHH
T ss_pred Hhh----cc----cccch-----------hhhccccccCCCHHHHHHHHHc------CC--------HHHHHHHHHHHHH
Confidence 321 00 00000 000000 001122222222222 23 6788899999999
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEE---cCCc
Q 010456 411 AAAGIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKV---TEDG 487 (510)
Q Consensus 411 ~Aa~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~---s~Dg 487 (510)
.|.+|+.++..+++ -.|.+.|++....+.|.+.+++.+++...+.....+.+.. .+|.
T Consensus 250 L~~~i~~l~~~l~p-------------------~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a 310 (326)
T 2qm1_A 250 LGLATGNLGNTLNP-------------------DSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEA 310 (326)
T ss_dssp HHHHHHHHHHHHCC-------------------SEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGH
T ss_pred HHHHHHHHHHhcCC-------------------CEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchH
Confidence 99999999999975 2577999999989999999999998764321111345554 5567
Q ss_pred chHHHHHHHH
Q 010456 488 SGIGAALLAA 497 (510)
Q Consensus 488 SgiGAAl~Aa 497 (510)
+.+|||.++.
T Consensus 311 ~~~GAa~l~~ 320 (326)
T 2qm1_A 311 GVIGAASLAL 320 (326)
T ss_dssp HHHHHHHHGG
T ss_pred HHHHHHHHHH
Confidence 8899988764
No 9
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=99.80 E-value=1.5e-17 Score=176.13 Aligned_cols=342 Identities=15% Similarity=0.178 Sum_probs=223.9
Q ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHhhcCCCC-------CCcceeecccccCCCCccceeEEEEEeCCceeEEEEEEEcC
Q 010456 46 LEEGCETTVSRLRQVVDAMAVEMHAGLASEGG-------SKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQLGG 118 (510)
Q Consensus 46 ~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~-------s~l~MlPs~v~~lPtG~E~G~~LalDlGGTN~RV~~V~l~g 118 (510)
+.+.+.++...+..++++|.+ +||-.+.+ ..-+.+.++. | +.+.+++||+|||++|++++++.|
T Consensus 59 la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~s~~GR~~~~l~~~---~---~~~~~lGIDiGgt~i~~~l~d~~G 129 (429)
T 1z05_A 59 LSKESELAPASITKITRELID---AHLIHETTVQEAISRGRPAVGLQTN---N---LGWQFLSMRLGRGYLTIALHELGG 129 (429)
T ss_dssp HHHHHTCCHHHHHHHHHHHHH---TTSEEEECHHHHHHHTSCCEEEEEC---C---TTEEEEEEEEETTEEEEEEEETTS
T ss_pred HHHHHCCCHHHHHHHHHHHHH---CCCEEeccccCCCCCCCCCeEEEEC---C---CCCEEEEEEECCCEEEEEEECCCC
Confidence 444566788888888888776 56632211 0112333332 2 457899999999999999999976
Q ss_pred CcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceeeeecccccccCCceEEEecccc
Q 010456 119 QRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILIKWTKG 198 (510)
Q Consensus 119 ~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFPv~q~si~~g~Li~wtKg 198 (510)
. ++.+. .++.|. .+.+++++.|++.|.+++++.+.. ..+...+|+.++.|++. ++|+++..+
T Consensus 130 ~---il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~~~~-- 191 (429)
T 1z05_A 130 E---VLIDT--KIDIHE----IDQDDVLARLLFEIEEFFQTYAAQ----LDRVTSIAITLPGLVNS---EQGIVLQMP-- 191 (429)
T ss_dssp C---EEEEE--EEECCC----CBHHHHHHHHHHHHHHHHHHTTTT----CCEEEEEEEEESSEEET---TTTEEEECS--
T ss_pred C---EEEEE--EEcCCC----CCHHHHHHHHHHHHHHHHHhcCCC----cCceEEEEEeccCcEeC---CCCeEeecC--
Confidence 3 44432 244443 147899999999999999875421 23456788888999884 457776433
Q ss_pred eecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhcccc----CCCCceEEEEeeCCcceeeEcccCccccccCC
Q 010456 199 FAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY----HDEDTVAAVIIGTGTNACYLERTDAIIKCQGL 274 (510)
Q Consensus 199 F~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay----~~~~~~iglIlGTGtNa~Y~e~~~~I~k~~~~ 274 (510)
+++ |.+.++.+.|++.+ ++|| .|.||+.+..++..+ .+.+..+.+++|||..++++.+..-+....+.
T Consensus 192 -~l~-w~~~~l~~~L~~~~---~~pV---~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~ 263 (429)
T 1z05_A 192 -HYN-VKNLALGPEIYKAT---GLPV---FVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGN 263 (429)
T ss_dssp -SSB-CSSBCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEECCTTTTC
T ss_pred -CCC-CCCCCHHHHHHHHh---CCCE---EEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEEEEEEECCEEeeCCCCc
Confidence 232 77889999999988 7886 889999999999864 35678999999999999999875444444433
Q ss_pred CCCCCcEEEeeccCCcCCCCCCCCccccccccCCCCCCccchhhhccccchHHHHHHHHHHhhhcCCCCCCCchhhccCC
Q 010456 275 LTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFGPASSRLSMAF 354 (510)
Q Consensus 275 ~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl~~l~~~~~lF~~~p~~l~~~~ 354 (510)
..+-+.|.++.. + +. -.-.+.| .+|..+|+..|-+.++..+. .+. ++.|.
T Consensus 264 AGEiGH~~v~~~-------g-~~--------c~cG~~g--clE~~~S~~al~~~~~~~~~----~~~-----~~~l~--- 313 (429)
T 1z05_A 264 IGELGHIQIDPQ-------G-KR--------CHCGNYG--CLETVASSQAIRDQVTARIQ----AGE-----PSCLA--- 313 (429)
T ss_dssp TTBCTTSBCCTT-------C-CB--------CTTSCBS--BTHHHHSHHHHHHHHHHHHH----TTC-----CCTTT---
T ss_pred ccccCceEEcCC-------C-CC--------CCCCCCc--chHHHhCHHHHHHHHHHHhh----ccc-----ccccc---
Confidence 333334433320 0 00 0112344 79999999887665554321 110 00010
Q ss_pred CCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 010456 355 ILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAAGIVGILKKIGRDGSGGISSGR 434 (510)
Q Consensus 355 ~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa~iaaIl~~~~~~~~~~~~~~~ 434 (510)
..+..+.+.+.+..++ .+ ..|..+.+++++..|.+|+.++..+++
T Consensus 314 -----------~~~~~~~~~i~~~a~~------gD--------~~a~~il~~~~~~L~~~i~~l~~~ldP---------- 358 (429)
T 1z05_A 314 -----------TVEEISIEDICAAAAD------GD--------PLAVDVIQQLGRYLGAAIAIVINLFNP---------- 358 (429)
T ss_dssp -----------TCSSCCHHHHHHHHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHHCC----------
T ss_pred -----------cccCCCHHHHHHHHHc------CC--------HHHHHHHHHHHHHHHHHHHHHHHhcCC----------
Confidence 0001123333333332 33 567789999999999999999999876
Q ss_pred CccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEE---cCCcchHHHHHHHH
Q 010456 435 SRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKV---TEDGSGIGAALLAA 497 (510)
Q Consensus 435 ~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~---s~DgSgiGAAl~Aa 497 (510)
-.|.+.|++....+.|.+.+++.+++...+.....+.+.. .+| +.+|||.++.
T Consensus 359 ---------~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~~ 414 (429)
T 1z05_A 359 ---------EKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALIK 414 (429)
T ss_dssp ---------SEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHHH
T ss_pred ---------CEEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHHH
Confidence 2477899999988999999999998763211111344554 467 8999998764
No 10
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=99.79 E-value=1.8e-17 Score=173.88 Aligned_cols=346 Identities=14% Similarity=0.121 Sum_probs=222.4
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHhhcCCCC----CCcceeecccccCCCCccceeEEEEEeCCceeEEEEEEEcCCc
Q 010456 45 ELEEGCETTVSRLRQVVDAMAVEMHAGLASEGG----SKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQLGGQR 120 (510)
Q Consensus 45 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~----s~l~MlPs~v~~lPtG~E~G~~LalDlGGTN~RV~~V~l~g~~ 120 (510)
++.+...++...+..++++|.+ .||-.+.+ ++----|+.+.--| +.+.+++||+|||++|++++++.|+
T Consensus 35 ~la~~~~ls~~tv~~~v~~L~~---~g~i~~~~~~~~~~~GR~~~~l~~~~---~~~~~lgiDiG~t~i~~~l~d~~G~- 107 (406)
T 1z6r_A 35 DLSRLAQLAPASITKIVHEMLE---AHLVQELEIKEAGNRGRPAVGLVVET---EAWHYLSLRISRGEIFLALRDLSSK- 107 (406)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH---HTSEEEC-------------CEEECC---TTCEEEEEEEETTEEEEEEEETTCC-
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCcEEeecccCCCCCCCCCeEEEEcC---CccEEEEEEEcCCEEEEEEEcCCCC-
Confidence 4555667888888888888876 57732211 11111122221112 3568999999999999999999763
Q ss_pred ceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceeeeecccccccCCceEEEeccccee
Q 010456 121 SSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILIKWTKGFA 200 (510)
Q Consensus 121 ~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFPv~q~si~~g~Li~wtKgF~ 200 (510)
++.+. .++.|. .+.+++++.+++.|.+++++.+.. ..+...+|+.++.|++. ++|++...+ +
T Consensus 108 --il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~~~~---~ 169 (406)
T 1z6r_A 108 --LVVEE--SQELAL----KDDLPLLDRIISHIDQFFIRHQKK----LERLTSIAITLPGIIDT---ENGIVHRMP---F 169 (406)
T ss_dssp --EEEEE--EEECCS----SCSSCHHHHHHHHHHHHHHHTGGG----CCCEEEEEEEESSEEET---TTTEEEECT---T
T ss_pred --EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHHhcCCC----cCceeEEEEEeecCEeC---CCCEEecCC---C
Confidence 44332 234432 246789999999999999875321 12356788888899884 467777333 3
Q ss_pred cCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhcccc----CCCCceEEEEeeCCcceeeEcccCccccccCCCC
Q 010456 201 IESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY----HDEDTVAAVIIGTGTNACYLERTDAIIKCQGLLT 276 (510)
Q Consensus 201 ~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay----~~~~~~iglIlGTGtNa~Y~e~~~~I~k~~~~~~ 276 (510)
.++|.+.++.+.|++.+ ++|| .|.||+.+..++..+ .+.+..+.+++|||..++++.+..-+...++...
T Consensus 170 l~~w~~~~l~~~l~~~~---~~pv---~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~AG 243 (406)
T 1z6r_A 170 YEDVKEMPLGEALEQHT---GVPV---YIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLV 243 (406)
T ss_dssp CTTCSSBCHHHHHHHHH---SSCE---EEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEETTTTSSCCB
T ss_pred CCCccCCCHHHHHHHHH---CCCE---EEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEEEEEEECCEEeecCCCcCc
Confidence 45678899999999988 7886 889999999998864 2557899999999999999986544444333322
Q ss_pred CCCcEEEeeccCCcCCCCCCCCccccccccCCCCCCccchhhhccccchHHHHHHHHHHhhhcCCCCCCCchhhccCCCC
Q 010456 277 TSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFGPASSRLSMAFIL 356 (510)
Q Consensus 277 ~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl~~l~~~~~lF~~~p~~l~~~~~l 356 (510)
+-++|.++- |-.. -.-.+.| .+|..+|+..|-+.++..+.. .+. ..+
T Consensus 244 EiGh~~v~~---------------~g~~-c~cG~~g--clE~~~S~~al~~~~~~~~~~------~~~---~~~------ 290 (406)
T 1z6r_A 244 EIGHTQVDP---------------YGKR-CYCGNHG--CLETIASVDSILELAQLRLNQ------SMS---SML------ 290 (406)
T ss_dssp CGGGSBSCT---------------TSCB-CTTSCBS--BTHHHHSHHHHHHHHHHHHTT------CTT---CGG------
T ss_pred cCCceEecC---------------CCCC-CCCCCcc--chHHHcCHHHHHHHHHHhhhc------ccc---ccc------
Confidence 333333321 0000 0112344 899999998886665543210 000 000
Q ss_pred ChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCc
Q 010456 357 RTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAAGIVGILKKIGRDGSGGISSGRSR 436 (510)
Q Consensus 357 ~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa~iaaIl~~~~~~~~~~~~~~~~~ 436 (510)
.....+.+.+.+..++ .+ ..|..+.+++++..|.+|+.++..+++
T Consensus 291 ---------~~~~~~~~~v~~~a~~------gD--------~~a~~~l~~~~~~L~~~i~~l~~~ldP------------ 335 (406)
T 1z6r_A 291 ---------HGQPLTVDSLCQAALR------GD--------LLAKDIITGVGAHVGRILAIMVNLFNP------------ 335 (406)
T ss_dssp ---------GSSCCCHHHHHHHHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHHCC------------
T ss_pred ---------CcccCCHHHHHHHHHc------CC--------HHHHHHHHHHHHHHHHHHHHHHHhcCC------------
Confidence 0001122333333332 33 567789999999999999999999875
Q ss_pred cccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEE---EcCCcchHHHHHHH
Q 010456 437 SDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILK---VTEDGSGIGAALLA 496 (510)
Q Consensus 437 ~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~---~s~DgSgiGAAl~A 496 (510)
-.|.+.|++....+.|.+.+++.+++..-+.....+.+. +.+|...+|||++.
T Consensus 336 -------~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~ 391 (406)
T 1z6r_A 336 -------QKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVK 391 (406)
T ss_dssp -------SEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHH
T ss_pred -------CEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHH
Confidence 247789999988899999999999876321111234444 45678899998754
No 11
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=99.78 E-value=4.1e-17 Score=170.06 Aligned_cols=325 Identities=14% Similarity=0.131 Sum_probs=215.4
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHhhcCCC---CCCcceeecccccCCCCccceeEEEEEeCCceeEEEEEEEcCCcc
Q 010456 45 ELEEGCETTVSRLRQVVDAMAVEMHAGLASEG---GSKLKMLLTFVDNLPTGSEKGIYYALDLGGTNFRVLRVQLGGQRS 121 (510)
Q Consensus 45 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~---~s~l~MlPs~v~~lPtG~E~G~~LalDlGGTN~RV~~V~l~g~~~ 121 (510)
++.+...++...+..+.++|.+ +||=.+. .|+-=-=|+.+.- -.+.+.+++||+|||++|++++++.|+
T Consensus 38 ~la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~~~GR~~~~l~~---~~~~~~~lGIDiGgt~i~~~l~d~~G~-- 109 (380)
T 2hoe_A 38 ELAEELGLTKTTVGEIAKIFLE---KGIVVEEKDSPKGVGRPTKSLKI---SPNCAYVLGIEVTRDEIAACLIDASMN-- 109 (380)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---HTSEEEEECCC----CCCEEEEE---CGGGCEEEEEEECSSEEEEEEEETTCC--
T ss_pred HHHHHHCcCHHHHHHHHHHHHH---CCCEEeecCCCCCCCCCceEEEE---ccCCCeEEEEEECCCEEEEEEECCCCC--
Confidence 4445556888888888888876 5763211 1110001111111 124568999999999999999999763
Q ss_pred eeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceeeeecccccccCCceEEEecccceec
Q 010456 122 SILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSSGILIKWTKGFAI 201 (510)
Q Consensus 122 ~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFPv~q~si~~g~Li~wtKgF~~ 201 (510)
++.+. .++.|.. .+.+++++.+++.|.+++++.+.. ..+...+|+.++.|++. .+|++...+ ++
T Consensus 110 -vl~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd~---~~g~v~~~~---~l 173 (380)
T 2hoe_A 110 -ILAHE--AHPLPSQ---SDREETLNVMYRIIDRAKDMMEKL----GSKLSALTVAAPGPIDT---ERGIIIDPR---NF 173 (380)
T ss_dssp -EEEEE--EEECCSS---CCHHHHHHHHHHHHHHHHHHHHHT----TCCCCEEEEEESSCEET---TTTEECCCS---SC
T ss_pred -EEEEE--EEccCCC---CCHHHHHHHHHHHHHHHHHhcCCC----cCcEEEEEEEeeccEEC---CCCEEeccC---CC
Confidence 44432 2444432 257889999999999998765311 12346688888888874 456665332 22
Q ss_pred CCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhccccCCC--CceEEEEeeCCcceeeEcccCccccccCCCCCCC
Q 010456 202 ESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDE--DTVAAVIIGTGTNACYLERTDAIIKCQGLLTTSG 279 (510)
Q Consensus 202 ~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~~~--~~~iglIlGTGtNa~Y~e~~~~I~k~~~~~~~~~ 279 (510)
+|.+.++.+.|++.+ ++|| .+.||+.+..++..+... +..+.+++|||..++++.+..-+....+...+-+
T Consensus 174 -~w~~~~l~~~l~~~~---~~pV---~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~aGEiG 246 (380)
T 2hoe_A 174 -PLSQIPLANLLKEKY---GIEV---WVENDADMGAVGEKWYTKRDDSFAWILTGKGIGAGIIIDGELYRGENGYAGEIG 246 (380)
T ss_dssp -TTBTSCHHHHHHHHH---CSEE---EEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCEEEEEETTEECCCSSSCCCCGG
T ss_pred -CCcCCChHHHHHHHh---CCCE---EEechHHHHHHHHHHhCCCCCcEEEEEeCCceEEEEEECCEEeccCCCcccccc
Confidence 577889999999988 7775 889999999999875332 7889999999999999987655555555444555
Q ss_pred cEEEeeccCCcCCCCCCCCccccccccCCCCCCccchhhhccccchHHHHHHHHHHhhhcCCCCCCCchhhccCCCCChh
Q 010456 280 GMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFGPASSRLSMAFILRTP 359 (510)
Q Consensus 280 ~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl~~l~~~~~lF~~~p~~l~~~~~l~t~ 359 (510)
.|.++.+ +.+. -.+ ...+|..+|+..|-+ .-..+|
T Consensus 247 h~~v~~~---------~~c~--------cG~--~gclE~~~s~~~l~~----------~~~~v~---------------- 281 (380)
T 2hoe_A 247 YTRVFNG---------NEYV--------FLE--DVCNENVVLKHVLSM----------GFSSLA---------------- 281 (380)
T ss_dssp GCEEECS---------SSEE--------EHH--HHHCHHHHHHHHHHH----------CCC-TT----------------
T ss_pred ceEecCC---------CCCC--------CCC--ccHHHHHcCHHHHHH----------HHHHHH----------------
Confidence 5555431 0000 001 236788888765533 000011
Q ss_pred hhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcccc
Q 010456 360 LMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAAGIVGILKKIGRDGSGGISSGRSRSDI 439 (510)
Q Consensus 360 ~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa~iaaIl~~~~~~~~~~~~~~~~~~~~ 439 (510)
+..++ .+ ..|..+.+++++..|.+|+.++..+++
T Consensus 282 -----------------~~a~~------gD--------~~a~~~l~~~~~~La~~i~~l~~~ldP--------------- 315 (380)
T 2hoe_A 282 -----------------EARDS------GD--------VRVKEYFDDIARYFSIGLLNLIHLFGI--------------- 315 (380)
T ss_dssp -----------------HHHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHHCC---------------
T ss_pred -----------------HHHHC------CC--------HHHHHHHHHHHHHHHHHHHHHHHHhCC---------------
Confidence 01111 22 567778999999999999999999875
Q ss_pred ccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEE---EcCCcchHHHHHHHH
Q 010456 440 RMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILK---VTEDGSGIGAALLAA 497 (510)
Q Consensus 440 ~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~---~s~DgSgiGAAl~Aa 497 (510)
-.|.+.|++....+.|.+.+++.+++..... ..+.+. +.+|.+.+|||.++.
T Consensus 316 ----~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~--~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 316 ----SKIVIGGFFKELGENFLKKIKIEVETHLLYK--HSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp ----CEEEEEEGGGGGHHHHHHHHHHHHHHHCSSS--CCCEEEECCCCSCHHHHHHHHHHH
T ss_pred ----CEEEEcCchhhhhHHHHHHHHHHHHHhcCCC--CCcEEEEcCCCCcHHHHHHHHHHH
Confidence 2467889998888999999999998875432 234454 455678999998763
No 12
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=99.77 E-value=5.1e-17 Score=165.49 Aligned_cols=301 Identities=19% Similarity=0.202 Sum_probs=202.2
Q ss_pred eeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCcccccee
Q 010456 97 GIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGF 176 (510)
Q Consensus 97 G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGf 176 (510)
+.+|+||+|||++|++++++.|+ ++.+. .++.| .+.+++++.|++.|.+++++. +...+|+
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~---i~~~~--~~~~~-----~~~~~~~~~i~~~i~~~~~~~---------~i~gigi 62 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGR---ILSTF--KVATP-----PTAEGIVDAICAAVAGASEGH---------DVEAVGI 62 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCC---BCCCE--EEECC-----SSHHHHHHHHHHHHHHHHTTC---------CEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEEE--EeeCC-----CCHHHHHHHHHHHHHHHHhhc---------CceEEEE
Confidence 36899999999999999988763 44332 23333 247889999999999987542 2567888
Q ss_pred eeecccccccCCceEEEecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhcccc----CCCCceEEEE
Q 010456 177 TFSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY----HDEDTVAAVI 252 (510)
Q Consensus 177 TFSFPv~q~si~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay----~~~~~~iglI 252 (510)
..+.|++. ++|++..-+ ++ ++.+.++.+.|++.+ ++|| .+.||..+..++..+ .+.+..+.+.
T Consensus 63 ~~pG~vd~---~~g~v~~~~---~l-~w~~~~l~~~l~~~~---~~pv---~v~NDa~aaal~E~~~g~~~~~~~~~~l~ 129 (321)
T 3vgl_A 63 GAAGYVDD---KRATVLFAP---NI-DWRHEPLKDKVEQRV---GLPV---VVENDANAAAWGEYRFGAGQGHDDVICIT 129 (321)
T ss_dssp EESSEECT---TSSCEEECS---SS-CCEEECHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHSTTTTCSSEEEEE
T ss_pred eccccEeC---CCCEEEeCC---CC-CCcCCCHHHHHhhhh---CCCE---EEEehhhhHHHHHHHhCCCCCCCCEEEEE
Confidence 88888873 456665433 33 567889999999988 7886 889999999998764 3567899999
Q ss_pred eeCCcceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCccccccccCCCCCCccchhhhccccchHHHHHHH
Q 010456 253 IGTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRV 332 (510)
Q Consensus 253 lGTGtNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~v 332 (510)
+|||..++++.+..-+....+...+-+.|.++- |-.. -.-.+.| .+|..+||..|-+..+..
T Consensus 130 ~GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~---------------~g~~-c~cG~~g--clE~~~S~~al~~~~~~~ 191 (321)
T 3vgl_A 130 LGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVP---------------DGLL-CGCGSQG--CWEQYASGRALVRYAKQR 191 (321)
T ss_dssp ESSSEEEEEEETTEECCCTTSCCCCGGGSBSST---------------TCSB-CTTSCBS--BGGGTSSHHHHHHHHHHH
T ss_pred eCcceEEEEEECCEEecCCCCCCccccceEecC---------------CCCC-CCCCCcC--cHHHhcCHHHHHHHHHHH
Confidence 999999999987655454444333333333321 0000 1122444 899999999998877765
Q ss_pred HHHhhhcCCCCCCCchhhccCCCCChhhhhhhc-cCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010456 333 ILRMSEESDIFGPASSRLSMAFILRTPLMAAMH-EDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLA 411 (510)
Q Consensus 333 l~~l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~-~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~ 411 (510)
........ ..+ +.... .....+.+.+.+..++ .+ ..|..+.+++++..
T Consensus 192 ~~~~~~~~-------~~~----------~~~~~~~~~~~~~~~i~~~a~~------gD--------~~a~~~~~~~~~~L 240 (321)
T 3vgl_A 192 ANATPENA-------AVL----------LGLGDGSVDGIEGKHISEAARQ------GD--------PVAVDSFRELARWA 240 (321)
T ss_dssp HHHCGGGC-------HHH----------HHTTTSSSTTCCHHHHHHHHHT------TC--------HHHHHHHHHHHHHH
T ss_pred hhcCCcch-------hhh----------hhcccCccccCCHHHHHHHHHc------CC--------HHHHHHHHHHHHHH
Confidence 44321100 000 00000 0011122333333332 23 67788999999999
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhC-CCCcccEEEEE---cCCc
Q 010456 412 AAGIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILG-DDIAQHVILKV---TEDG 487 (510)
Q Consensus 412 Aa~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~-~~~~~~v~l~~---s~Dg 487 (510)
|.+|+.++..+++ -.|.+.|++....+.|.+.+++.+++... +.....+.++. .+|+
T Consensus 241 a~~i~~l~~~l~p-------------------~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a 301 (321)
T 3vgl_A 241 GAGLADLASLFDP-------------------SAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKA 301 (321)
T ss_dssp HHHHHHHHHHHCC-------------------SEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGH
T ss_pred HHHHHHHHHHhCC-------------------CEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcH
Confidence 9999999999976 25778999999889999999999987754 22223455654 4677
Q ss_pred chHHHHHHHH
Q 010456 488 SGIGAALLAA 497 (510)
Q Consensus 488 SgiGAAl~Aa 497 (510)
+.+|||.++.
T Consensus 302 ~l~GAa~l~~ 311 (321)
T 3vgl_A 302 GLVGAADLAR 311 (321)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8899987663
No 13
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=99.76 E-value=4e-17 Score=166.24 Aligned_cols=294 Identities=16% Similarity=0.189 Sum_probs=201.4
Q ss_pred cceeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccc
Q 010456 95 EKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRREL 174 (510)
Q Consensus 95 E~G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~l 174 (510)
+.+.+|++|+|||++|++++++.|+ ++.+. .++.|.. .+.+++++.|++.|.++++. . .+...+
T Consensus 17 ~~~~~lgidiggt~i~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~~-~-------~~i~gi 80 (321)
T 3r8e_A 17 FQGMILGIDVGGTSVKFGLVTPEGE---IQNAT--RFMTADW---VNGIGFVESMKLEIGNFLKQ-Y-------PIVKGV 80 (321)
T ss_dssp --CCEEEEECCSSEEEEEEECTTCC---EEEEE--EEEHHHH---HTTTCHHHHHHHHHHHHHHH-C-------TTCCEE
T ss_pred cCcEEEEEEECCCEEEEEEEcCCCc---EEEEE--EEeCCCC---CCHHHHHHHHHHHHHHHHhc-c-------CCeeEE
Confidence 4568999999999999999988763 44432 2333321 25678999999999998862 1 235678
Q ss_pred eeeeecccccccCCceEEEecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhcccc----CCCCceEE
Q 010456 175 GFTFSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY----HDEDTVAA 250 (510)
Q Consensus 175 GfTFSFPv~q~si~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay----~~~~~~ig 250 (510)
|+.++.|++ .++|+++..+ +++++.+.++.+.|++.+. ++|| .|.||+.+..++..+ .+.+..+.
T Consensus 81 gi~~pG~vd---~~~g~v~~~~---~l~~w~~~~l~~~l~~~~~--~~pV---~v~NDa~aaalaE~~~g~~~~~~~~v~ 149 (321)
T 3r8e_A 81 GIGWPGLVS---LDRTKVILLP---NIPSVVNVPIVEILRSEFP--HIHF---KIENDAKCAALGEYYFGENKRMQTFIL 149 (321)
T ss_dssp EEEESSEEC---TTSCCEEEBT---TBCCCCSCCHHHHHHHHCT--TSEE---EEEEHHHHHHHHHHHHSTTTTCSSEEE
T ss_pred EEEecccEE---CCCCEEEeCC---CCccccCCCHHHHHHHHcC--CCCE---EEEchHHHHHHHHHHhCCCCCCCcEEE
Confidence 888888887 3567776655 5566788899888887652 5565 899999999998864 35678999
Q ss_pred EEeeCCcceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCccccccccCCCCCCccchhhhccccchHHHHH
Q 010456 251 VIIGTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVR 330 (510)
Q Consensus 251 lIlGTGtNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR 330 (510)
+.+|||..++++.+..-+....+.. -|||..- ..| .| .+|.++|+..|-+..+
T Consensus 150 l~~GtGiG~gii~~G~l~~G~~g~a---------GEiGh~~-------~~~---------~g--clE~~~S~~al~~~~~ 202 (321)
T 3r8e_A 150 LALGTGVGSGVMMNGKLFIGGRGNG---------TEVGHML-------TTR---------GK--SLENQVGINHLIAYTH 202 (321)
T ss_dssp EEESSSEEEEEEETTEECCCTTSCC---------CCGGGCB-------CTT---------SS--BSHHHHSHHHHHHHHH
T ss_pred EEECCceEEEEEECCEEecCCCCCC---------ccccccc-------CCC---------CC--cHHHhcCHHHHHHHHH
Confidence 9999999999998654434333322 2555441 011 34 8999999999977776
Q ss_pred HHHHHhhhcCCCCCCCchhhccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010456 331 RVILRMSEESDIFGPASSRLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARL 410 (510)
Q Consensus 331 ~vl~~l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L 410 (510)
..+..-. ++.+ .+..+...+.+.+.+..++ .+ ..|..+.+++++.
T Consensus 203 ~~~~~~~---------~~~~------------~~~~~~~~~~~~i~~~a~~------gD--------~~a~~~~~~~~~~ 247 (321)
T 3r8e_A 203 EQLALDV---------AKKS------------SLHTIAELSPKVIADHAAQ------GD--------ALALAVWADIGTI 247 (321)
T ss_dssp HHHHHCT---------TCCC------------SGGGCSSCCHHHHHHHHHT------TC--------HHHHHHHHHHHHH
T ss_pred HHhhccC---------cccc------------cccccccCCHHHHHHHHHc------CC--------HHHHHHHHHHHHH
Confidence 6433110 0000 0000111223333333333 33 6778899999999
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEc---CCc
Q 010456 411 AAAGIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVT---EDG 487 (510)
Q Consensus 411 ~Aa~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s---~Dg 487 (510)
.|.+|+.++..+++ -.|.+.|++....+.|.+.+++.+++...+.....+.++.+ +|+
T Consensus 248 La~~i~~l~~~ldP-------------------~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a 308 (321)
T 3r8e_A 248 IGESLVNIVRVMDL-------------------NNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDA 308 (321)
T ss_dssp HHHHHHHHHHHHCC-------------------CEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGH
T ss_pred HHHHHHHHHHHHCC-------------------CEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcH
Confidence 99999999999876 35778999998889999999999998754322234566654 567
Q ss_pred chHHHHHHH
Q 010456 488 SGIGAALLA 496 (510)
Q Consensus 488 SgiGAAl~A 496 (510)
..+|||.++
T Consensus 309 ~~~GAa~l~ 317 (321)
T 3r8e_A 309 GLLGAAGLI 317 (321)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 889998876
No 14
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=99.75 E-value=8.7e-17 Score=162.59 Aligned_cols=287 Identities=20% Similarity=0.206 Sum_probs=197.1
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceee
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFT 177 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfT 177 (510)
.++++|+|||++|++++++.+ ++.. ..++.|.. ..+++++.|++.+.++++... .+...+|+.
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~~----~l~~--~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~-------~~i~gigi~ 64 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGKR----LLSK--VVVPTPKE----GGERVAEALAEAAERAEREAG-------VRGEAIGLG 64 (302)
T ss_dssp CEEEEEECSSEEEEEEECSSS----BSCC--EEEECCSS----CHHHHHHHHHHHHHHHHHHHT-------CCCSSEEEE
T ss_pred EEEEEEEcCCEEEEEEEeCCC----cEEE--EEEcCCCC----ChHHHHHHHHHHHHHHHhhcc-------CCceEEEEE
Confidence 479999999999999998752 2222 23454432 237899999999999887642 235678888
Q ss_pred eecccccccCCceEEEecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhcccc----CCCCceEEEEe
Q 010456 178 FSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY----HDEDTVAAVII 253 (510)
Q Consensus 178 FSFPv~q~si~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay----~~~~~~iglIl 253 (510)
.+.|++. ++|++...+ +++++.+.++.+.|++.+ ++|| .+.||+.+..++..+ .+.+..+.+.+
T Consensus 65 ~pG~vd~---~~g~v~~~~---~~~~w~~~~l~~~l~~~~---~~pv---~v~NDa~aaal~E~~~g~~~~~~~~~~l~~ 132 (302)
T 3vov_A 65 TPGPLDF---RRGVIRFAP---NIPGVQDFPIRRILEEAT---GRPV---FLENDANAAALAEHHLGAAQGEESSLYLTV 132 (302)
T ss_dssp ESSCEET---TTTEEC------CCTTCTTCCHHHHHHHHH---SSCE---EEEEHHHHHHHHHHHHSTTTTCSCEEEEEE
T ss_pred ecccEeC---CCCEEEcCC---CCCCcCCCChHHHHHHhh---CCCE---EEEechHHHHHHHHHhCCCCCCCCEEEEEE
Confidence 8888983 457665444 566788999999999988 7886 789999999998875 35678899999
Q ss_pred eCCcceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCccccccccCCCCCCccchhhhccccchHHHHHHHH
Q 010456 254 GTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVI 333 (510)
Q Consensus 254 GTGtNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl 333 (510)
|||..++++.+..-+...++...+-++|.++- ++ .. -...+.| .+|..+||..|-+.++...
T Consensus 133 GtGiG~gii~~g~l~~G~~g~aGEiGh~~v~~-------~g-------~~--c~cg~~g--clE~~~s~~~l~~~~~~~~ 194 (302)
T 3vov_A 133 STGIGGGVVLGGRVLRGERGQGGELGHLTLLP-------GG-------PA--CGCGLEG--CLEALAAGRALERDATYAF 194 (302)
T ss_dssp SSSEEEEEEETTEECCCTTSCTTCGGGSBSST-------TC-------CB--CTTSCBS--BHHHHHSHHHHHHHHHHHH
T ss_pred CCceeEEEEECCEEeeCCCCCCccccceEecC-------CC-------CC--CCCCCcc--hHHHHhCHHHHHHHHHHhh
Confidence 99999999987554444444333333333321 00 00 1122344 8999999988866554321
Q ss_pred HHhhhcCCCCCCCchhhccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 010456 334 LRMSEESDIFGPASSRLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAA 413 (510)
Q Consensus 334 ~~l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa 413 (510)
. . .+ +.+.+.+..++ .+ ..|..+.+++++..+.
T Consensus 195 ~----~---------------~~--------------~~~~i~~~a~~------gd--------~~a~~~~~~~~~~l~~ 227 (302)
T 3vov_A 195 Q----R---------------PV--------------DTRELFRLFQA------GD--------PKAERLVLQAARYVGI 227 (302)
T ss_dssp T----S---------------CC--------------CHHHHHHHHHT------TC--------HHHHHHHHHHHHHHHH
T ss_pred C----C---------------CC--------------CHHHHHHHHHc------CC--------HHHHHHHHHHHHHHHH
Confidence 0 0 01 12222222222 23 5677889999999999
Q ss_pred HHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEe-eecHhHHHHHHHHHHhhhCCCCcccEEEE-EcCCcchHH
Q 010456 414 GIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLY-SSYTLFREYLHEALTDILGDDIAQHVILK-VTEDGSGIG 491 (510)
Q Consensus 414 ~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~-~~~p~f~~~l~~~l~~l~~~~~~~~v~l~-~s~DgSgiG 491 (510)
+|+.++..+++ -.|.+.|++. ...+.|.+.+++.+++...+.....|..- +.+|++.+|
T Consensus 228 ~i~~l~~~~~p-------------------~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~G 288 (302)
T 3vov_A 228 GLASLVKAFDP-------------------GVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLG 288 (302)
T ss_dssp HHHHHHHHHCC-------------------SEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHH
T ss_pred HHHHHHHHHCC-------------------CEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHH
Confidence 99999999875 2577899999 88899999999999987644333333332 456788899
Q ss_pred HHHHHH
Q 010456 492 AALLAA 497 (510)
Q Consensus 492 AAl~Aa 497 (510)
||.++-
T Consensus 289 Aa~l~~ 294 (302)
T 3vov_A 289 AALTAY 294 (302)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998774
No 15
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=99.74 E-value=1.2e-16 Score=162.72 Aligned_cols=290 Identities=18% Similarity=0.225 Sum_probs=192.4
Q ss_pred eeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCcccccee
Q 010456 97 GIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGF 176 (510)
Q Consensus 97 G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGf 176 (510)
+.+|+||+|||++|++++++.|+ ++.+. +++.|.. +.+++++.|.+.|.++..... ....+|+
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~--------~i~~igi 86 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRR---LQWEK--RVPTPHT----SYSAFLDAVCELVEEADQRFG--------VKGSVGI 86 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCCS----CHHHHHHHHHHHHHHHHHHHT--------SCCEEEE
T ss_pred ceEEEEEECCCEEEEEEEeCCCC---EEEEE--EecCCCC----CHHHHHHHHHHHHHHHHHhcC--------CccEEEE
Confidence 46999999999999999998763 44332 2444431 467889999998888876532 1355888
Q ss_pred eeecccccccCCceEEEecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhccccC----CCCceEEEE
Q 010456 177 TFSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYH----DEDTVAAVI 252 (510)
Q Consensus 177 TFSFPv~q~si~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~----~~~~~iglI 252 (510)
.++.|++. ++|+++ ++ +.+.+.+.++.+.|++.+ ++|| .|.||+.+..++..+. +.+..+.++
T Consensus 87 ~~pG~vd~---~~g~v~-~~---~~~~~~~~~l~~~l~~~~---~~pv---~v~NDa~aaalgE~~~g~~~~~~~~v~l~ 153 (327)
T 2ap1_A 87 GIPGMPET---EDGTLY-AA---NVPAASGKPLRADLSARL---DRDV---RLDNDANCFALSEAWDDEFTQYPLVMGLI 153 (327)
T ss_dssp EESSBSCC---TTSCCB-CT---TCTTTTTSCHHHHHHHHH---TSCE---EEEEHHHHHHHHHHTSTTGGGCSEEEEEE
T ss_pred EeeeeEEC---CCCEEE-cc---CCCccCCCChHHHHHHHH---CCCE---EEecHHHHHHHHHHHhCcCCCCCcEEEEE
Confidence 88888874 346554 34 456677889999999988 7775 8999999999987643 457889999
Q ss_pred eeCCcceeeEcccCccccccCCCCCCCcEEEeecc----CCcCCCCCCCCccccccccCCCCCCccchhhhccccchHHH
Q 010456 253 IGTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEW----GNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDI 328 (510)
Q Consensus 253 lGTGtNa~Y~e~~~~I~k~~~~~~~~~~miIN~Ew----G~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEi 328 (510)
+|||..++++.+...+..+.+...+-+.|.++..+ +.... ... -.-.+.| .+|..+|+..|-+.
T Consensus 154 ~GtGiG~giv~~G~l~~G~~g~aGE~Gh~~~~~~~~~~~~~~~~--------g~~--c~cG~~g--cle~~~s~~~l~~~ 221 (327)
T 2ap1_A 154 LGTGVGGGLVLNGKPITGQSYITGEFGHMRLPVDALTLMGFDFP--------LRR--CGCGQMG--CIENYLSGRGFAWL 221 (327)
T ss_dssp ESSSEEEEEEETTEEECCTTSCTTCGGGSBCCHHHHHHHCTTSC--------CCB--CTTSCBS--BTHHHHSHHHHHHH
T ss_pred ECCcEEEEEEECCEEeecCCCcccccccEEEecCcccccccccC--------CCc--CCCCchh--hHHHHhCHHHHHHH
Confidence 99999999998765444444443444555544321 11000 000 0112344 88999999876554
Q ss_pred HHHHHHHhhhcCCCCCCCchhhccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010456 329 VRRVILRMSEESDIFGPASSRLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAA 408 (510)
Q Consensus 329 vR~vl~~l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA 408 (510)
++... + .+ .+.+.+.+..++ .+ ..|..+.++++
T Consensus 222 ~~~~~----------~-------~~----------------~~~~~i~~~a~~------gd--------~~a~~il~~~~ 254 (327)
T 2ap1_A 222 YQHYY----------D-------QS----------------LQAPEIIALWEQ------GD--------EQAHAHVERYL 254 (327)
T ss_dssp HHHHH----------C-------CC----------------CCHHHHHHHHHT------TC--------HHHHHHHHHHH
T ss_pred HHHhc----------C-------CC----------------CCHHHHHHHHHc------CC--------HHHHHHHHHHH
Confidence 43211 0 00 011222222222 23 56778999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEE---cC
Q 010456 409 RLAAAGIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKV---TE 485 (510)
Q Consensus 409 ~L~Aa~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~---s~ 485 (510)
+..|.+|+.++..+++ . .|.+.|++....+.|.+ +++.+++.+.+ ....+.++. .+
T Consensus 255 ~~La~~i~~l~~~l~p-----------------~--~IvlgG~i~~~~~~~~~-l~~~l~~~~~~-~~~~~~i~~s~~~~ 313 (327)
T 2ap1_A 255 DLLAVCLGNILTIVDP-----------------D--LLVIGGGLSNFTAITTQ-LAERLPRHLLP-VARAPRIERARHGD 313 (327)
T ss_dssp HHHHHHHHHHHHHHCC-----------------S--EEEEESGGGGSTHHHHS-SGGGSGGGSCT-TCCCCEEEECSCTT
T ss_pred HHHHHHHHHHHHHhCC-----------------C--EEEEeChhhcchhHHHH-HHHHHHHhhcc-ccCCCEEEEcCCCC
Confidence 9999999999999875 2 47789999887665555 77877766543 233566665 45
Q ss_pred CcchHHHHHHH
Q 010456 486 DGSGIGAALLA 496 (510)
Q Consensus 486 DgSgiGAAl~A 496 (510)
|.+.+|||.++
T Consensus 314 ~a~~~GAa~la 324 (327)
T 2ap1_A 314 AGGMRGAAFLH 324 (327)
T ss_dssp THHHHHHHHTT
T ss_pred cHHHHHHHHHH
Confidence 77889998764
No 16
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=99.72 E-value=4.4e-16 Score=159.17 Aligned_cols=293 Identities=16% Similarity=0.193 Sum_probs=195.5
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceee
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFT 177 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfT 177 (510)
.++++|+|||++|++++++.|+ ++.+. +++.|.. +.+++++.|.+.|.++..... ....+|+.
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~--------~~~gigi~ 87 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLE---RVATE--RVPTPTD----DYPLLLETIAGLVAKYDQEFA--------CEGKIGLG 87 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCTT----CHHHHHHHHHHHHHHHHHHHT--------SCCEEEEE
T ss_pred EEEEEEECCCEEEEEEEeCCCc---EEEEE--EecCCCC----CHHHHHHHHHHHHHHHHHhcC--------CccEEEEE
Confidence 6899999999999999988763 44432 2455532 578899999999998876542 13568888
Q ss_pred eecccccccCCceEEEecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhccccC----CCCceEEEEe
Q 010456 178 FSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYH----DEDTVAAVII 253 (510)
Q Consensus 178 FSFPv~q~si~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~----~~~~~iglIl 253 (510)
++.|++. .+|++. ++ +++.+.+.++.+.|++.+ ++|| .|.||+.+..++..+. +.+..+.+++
T Consensus 88 ~pG~vd~---~~g~v~-~~---~~~~~~~~~l~~~l~~~~---~~pV---~v~NDa~aaalgE~~~g~~~~~~~~~~l~~ 154 (327)
T 4db3_A 88 LPGMEDA---DDATVL-TV---NVPAAKGKPLRADLEAKI---GRSV---KIENDANCFALSEAWDEELQDAPSVMGLIL 154 (327)
T ss_dssp ESEEECT---TTCCEE-ES---SSGGGTTSCHHHHHHHHH---SSCC---EEEEHHHHHHHHHHTSTTTTTCSEEEEEEE
T ss_pred eeccEeC---CCCEEE-cC---CCccccCCCHHHHHHHHH---CCCE---EEecchhHHHHHHHHhCCCCCCCcEEEEEe
Confidence 8888873 456553 44 344457889999999988 7887 8899999999998753 4578899999
Q ss_pred eCCcceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCccccccccCCCCCCccchhhhccccchHHHHHHHH
Q 010456 254 GTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVI 333 (510)
Q Consensus 254 GTGtNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl 333 (510)
|||..++++.+..-+....+...+-+.|.++..-..+ ++ .++|-.. -.-.+.| .+|.++||..|-+..+...
T Consensus 155 GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~~~~~~----~~-~~~~g~~-C~cG~~g--clE~~~S~~al~~~~~~~~ 226 (327)
T 4db3_A 155 GTGFGGGLIYEGKVFSGRNNVAGELGHMRLPLDAWFH----LG-DNAPLLG-CGCGKKG--CLDSYLSGRGFELLYAHYY 226 (327)
T ss_dssp SSSEEEEEEETTEECCCTTSCTTCGGGSBCCHHHHHH----TC-TTCCCCB-CTTSCBS--BGGGTSSHHHHHHHHHHHH
T ss_pred CccceEEEEECCEEeecCCCcCcccccEEeccccccc----cc-cccCCCc-CCCCCcc--hhHhhhCHHHHHHHHHHhc
Confidence 9999999998755444444444444455443310000 00 0000000 0011333 8999999998866554321
Q ss_pred HHhhhcCCCCCCCchhhccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 010456 334 LRMSEESDIFGPASSRLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAA 413 (510)
Q Consensus 334 ~~l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa 413 (510)
+ ..+ +.+.+.+..++ .+ ..|..+.+++++..|.
T Consensus 227 ----------~---------~~~--------------~~~~i~~~a~~------gD--------~~a~~~~~~~~~~La~ 259 (327)
T 4db3_A 227 ----------G---------EEK--------------KAIDIIKANAA------GD--------EKAAEHVERFMELLAI 259 (327)
T ss_dssp ----------S---------CCC--------------CHHHHHHHHHH------TC--------HHHHHHHHHHHHHHHH
T ss_pred ----------C---------CCC--------------CHHHHHHHHHc------CC--------HHHHHHHHHHHHHHHH
Confidence 0 001 12222223332 23 5677889999999999
Q ss_pred HHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEE---cCCcchH
Q 010456 414 GIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKV---TEDGSGI 490 (510)
Q Consensus 414 ~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~---s~DgSgi 490 (510)
+|+.++..+++ -.|.+.|++... +.|.+.+++.+++.+.+.. ..+.++. .+|++.+
T Consensus 260 ~i~~l~~~l~p-------------------~~IvlgGgi~~~-~~l~~~l~~~l~~~~~~~~-~~~~i~~s~lg~~a~~~ 318 (327)
T 4db3_A 260 CFGNIFTANDP-------------------HVVALGGGLSNF-ELIYEEMPKRVPKYLLSVA-KCPKIIKAKHGDSGGVR 318 (327)
T ss_dssp HHHHHHHHHCC-------------------SEEEEESGGGGC-THHHHHHHHHGGGGSCTTC-CCCEEEECSCGGGHHHH
T ss_pred HHHHHHHHhCC-------------------CEEEEeCcccch-HHHHHHHHHHHHHHhcccc-CCCEEEECCCCCcHHHH
Confidence 99999999876 256788998764 7788899999987754322 3456664 4577888
Q ss_pred HHHHHH
Q 010456 491 GAALLA 496 (510)
Q Consensus 491 GAAl~A 496 (510)
|||.++
T Consensus 319 GAa~l~ 324 (327)
T 4db3_A 319 GAAFLN 324 (327)
T ss_dssp HHHHTT
T ss_pred HHHHHH
Confidence 998654
No 17
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=99.71 E-value=8.1e-16 Score=155.02 Aligned_cols=279 Identities=16% Similarity=0.185 Sum_probs=187.1
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceee
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFT 177 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfT 177 (510)
.++++|+|||++|++++++.|+ ++.+. .++.|. .+.+++++.+.+ ++++. .+...+|+.
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~----~~~~~~~~~i~~----~~~~~--------~~i~gigi~ 63 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGE---IILTK--SAEISG----SDGDQILAEMKV----FLAEN--------TDVTGIAVS 63 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEE--EEECST----TCHHHHHHHHHH----HHHTC--------TTCCEEEEE
T ss_pred EEEEEEeCCCeEEEEEECCCCC---EEEEE--EecCCC----CCHHHHHHHHHH----HHhhc--------CCeeEEEEe
Confidence 6899999999999999988763 44432 244442 134556655544 44332 135678888
Q ss_pred eecccccccCCceEEEecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhcccc----CCCCceEEEEe
Q 010456 178 FSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY----HDEDTVAAVII 253 (510)
Q Consensus 178 FSFPv~q~si~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay----~~~~~~iglIl 253 (510)
++.|++. ++|+++.-+ +++++.+.++.+.|++.+ ++|| .+.||+.+..++..+ .+.+..+.+.+
T Consensus 64 ~pG~vd~---~~g~v~~~~---~l~~w~~~~l~~~l~~~~---~~pV---~v~NDa~aaal~E~~~g~~~~~~~~~~l~~ 131 (297)
T 4htl_A 64 APGYVNP---KTGLITMGG---AIRRFDNFNLKEWLEAET---GLPV---AIENDANCALLAEKWLGKGQDLDDFLCLTI 131 (297)
T ss_dssp ESSEECT---TTCEEEECT---TCGGGTTEEHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHSTTTTCSSEEEEEE
T ss_pred cCcceeC---CCCEEEeCC---CCCCccCCCHHHHHHHHH---CcCE---EEecHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 8888973 567776544 455677889999999988 7886 899999999998874 35678999999
Q ss_pred eCCcceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCccccccccCCCCCCccchhhhccccchHHHHHHHH
Q 010456 254 GTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVI 333 (510)
Q Consensus 254 GTGtNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl 333 (510)
|||..++++.+..-+...++...+-++|+++. + + ...+|...+|..+|+..|-+..+...
T Consensus 132 GtGiG~giv~~G~l~~G~~g~aGEiGh~~~~~-------~-------~------~~~~~~~~le~~~s~~~l~~~~~~~~ 191 (297)
T 4htl_A 132 GTGIGGGIFSNGELVRGGRFRAGEFGYMFSER-------P-------G------AFRPGKYTLNETTTMLVLRRQYAELT 191 (297)
T ss_dssp SSSEEEEEEETTEECCCTTSCCCCGGGSBSSC-------C-------C------SSCGGGGBHHHHSSHHHHHHHHHHHH
T ss_pred CcceEEEEEECCEEEecCCCCcccccceEecC-------C-------C------CcCcccCcHHHhccHHHHHHHHHHHh
Confidence 99999999987554444444333333333321 0 0 01245567899999988765544321
Q ss_pred HHhhhcCCCCCCCchhhccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 010456 334 LRMSEESDIFGPASSRLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAA 413 (510)
Q Consensus 334 ~~l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa 413 (510)
+ .+. ..+ +.+.+.+..++ .+ ..|..+.++++++.|.
T Consensus 192 ----------~-~~~-----~~~--------------~~~~i~~~a~~------gd--------~~a~~~~~~~~~~La~ 227 (297)
T 4htl_A 192 ----------G-RPL-----EEI--------------TGEEIFANYDA------HD--------AVSERLITEFYTGICT 227 (297)
T ss_dssp ----------C-CCG-----GGC--------------CHHHHHHHHHT------TC--------HHHHHHHHHHHHHHHH
T ss_pred ----------c-CCc-----cCC--------------CHHHHHHHHHc------CC--------HHHHHHHHHHHHHHHH
Confidence 0 000 001 12222222222 23 5677899999999999
Q ss_pred HHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEE---EcCCcchH
Q 010456 414 GIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILK---VTEDGSGI 490 (510)
Q Consensus 414 ~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~---~s~DgSgi 490 (510)
+|+.++..+++ -.|.+.|++.. .+.|.+.+++.++.... ..+.++ +.+|++.+
T Consensus 228 ~i~~l~~~~~p-------------------~~IvlgGgi~~-~~~~~~~l~~~l~~~~~----~~~~i~~s~lg~~a~~~ 283 (297)
T 4htl_A 228 GLYNLIYLFDP-------------------THIFIGGGITS-RPTFIAELKHHMESFGL----RDTIIETATHKNQAGLL 283 (297)
T ss_dssp HHHHHHHHHCC-------------------SEEEEESGGGG-STTHHHHHHHHHTTTCC----TTCEEEECSCTTTHHHH
T ss_pred HHHHHHHHhCC-------------------CEEEEeCcccc-cHHHHHHHHHHHHHhcc----CCCeEEECCcCChHHHH
Confidence 99999999876 24778899987 58899999998886533 234455 45678999
Q ss_pred HHHHHHH
Q 010456 491 GAALLAA 497 (510)
Q Consensus 491 GAAl~Aa 497 (510)
|||.++.
T Consensus 284 GAa~l~~ 290 (297)
T 4htl_A 284 GAVYHFL 290 (297)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 9998774
No 18
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=99.71 E-value=1.9e-15 Score=154.90 Aligned_cols=304 Identities=20% Similarity=0.221 Sum_probs=193.1
Q ss_pred ceeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccce
Q 010456 96 KGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELG 175 (510)
Q Consensus 96 ~G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lG 175 (510)
.+.+|+||+|||++|++++++.|+ ++.+. .++.|. +.+++++.+.+.|.+++++.... ..+...+|
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~-----~~~~~~~~i~~~i~~~~~~~~~~----~~~i~gig 94 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSMKGE---IVKKY--TQFNPK-----TYEERINLILQMCVEAAAEAVKL----NCRILGVG 94 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEECCS-----SHHHHHHHHHHHHHHHHHHHHHT----TEEEEEEE
T ss_pred CcEEEEEEECCCEEEEEEECCCCc---EEEEE--EEcCCC-----CHHHHHHHHHHHHHHHHHhcccc----cCceEEEE
Confidence 468999999999999999998763 44432 233332 46788899999999988753211 12346678
Q ss_pred eeeecccccccCCceEEEecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhcccc----CCCCceEEE
Q 010456 176 FTFSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY----HDEDTVAAV 251 (510)
Q Consensus 176 fTFSFPv~q~si~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay----~~~~~~igl 251 (510)
+.++.|++. ++|+++.-+. ..+++.+.++.+.|++.+ ++|+ .|.||+.+..++..+ .+.+..+.+
T Consensus 95 i~~pG~vd~---~~g~v~~~~~--~~~~w~~~~l~~~l~~~~---~~pv---~v~NDa~aaal~E~~~g~~~~~~~~v~i 163 (343)
T 2yhw_A 95 ISTGGRVNP---REGIVLHSTK--LIQEWNSVDLRTPLSDTL---HLPV---WVDNDGNCAALAERKFGQGKGLENFVTL 163 (343)
T ss_dssp EEESSEEET---TTTEEEECCT--TSSSCSSEECHHHHHHHH---CSCE---EEEEHHHHHHHHHHHTSTTTTCSCEEEE
T ss_pred EecccCEeC---CCCEEEeCCc--CCCCCcCCCHHHHHHHHH---CCCE---EEechhHHHHHHHHHhCCCCCCCcEEEE
Confidence 888888874 4577664331 124577889999999988 7886 889999999999864 245778999
Q ss_pred EeeCCcceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCccccccccCCCCCCccchhhhccccchHHHHHH
Q 010456 252 IIGTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRR 331 (510)
Q Consensus 252 IlGTGtNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~ 331 (510)
++|||..++++.+...+....+...+-+.|.++.... . -.--+.| .+|..+|+..|-+.++.
T Consensus 164 ~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~~~~~g~--------~--------c~cG~~g--clE~~~s~~al~~~~~~ 225 (343)
T 2yhw_A 164 ITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLXGP--------D--------CSCGSHG--CIEAYASGMALQREAKK 225 (343)
T ss_dssp EESSSEEEEEEETTEECCCTTSCTTCGGGCBCCC--C--------B--------CTTSCBS--BHHHHHSHHHHHHHHHH
T ss_pred EECCCEEEEEEECCEEecCCCCcccccCCEEEccCCC--------c--------CCCCCCC--cHHHhcCHHHHHHHHHH
Confidence 9999999999986544443333222333333321100 0 0011233 79999999888776665
Q ss_pred HHHHhhhcCCCCCCCchhhccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010456 332 VILRMSEESDIFGPASSRLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLA 411 (510)
Q Consensus 332 vl~~l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~ 411 (510)
... .. ... .+. .... .++..+.+.+.+..++ .+ ..|..+.+++++..
T Consensus 226 ~~~----~~-~~~-~~~-----~~~~--------~~~~~~~~~v~~~a~~------gd--------~~a~~il~~~~~~L 272 (343)
T 2yhw_A 226 LHD----ED-LLL-VEG-----MSVP--------KDEAVGALHLIQAAKL------GN--------AKAQSILRTAGTAL 272 (343)
T ss_dssp HHH----TT-CSC-CTT-----CCC------------CCCHHHHHHHHHT------TC--------HHHHHHHHHHHHHH
T ss_pred hhc----cc-ccc-ccc-----cccc--------ccccCCHHHHHHHHHc------CC--------HHHHHHHHHHHHHH
Confidence 322 11 000 000 0000 0001122233333332 33 66788999999999
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEc--CCcch
Q 010456 412 AAGIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVT--EDGSG 489 (510)
Q Consensus 412 Aa~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s--~DgSg 489 (510)
|.+|+.++..+++ -.|.+.|++. +.|.+.+++.+++...+. ...+.++.+ .|.+.
T Consensus 273 a~~i~~l~~~l~P-------------------~~IvlgG~i~---~~~~~~l~~~l~~~~~~~-~~~~~i~~s~~~~~~~ 329 (343)
T 2yhw_A 273 GLGVVNILHTMNP-------------------SLVILSGVLA---SHYIHIVKDVIRQQALSS-VQDVDVVVSDLVDPAL 329 (343)
T ss_dssp HHHHHHHHHHTCC-------------------SEEEEESTTH---HHHHHHHHHHHHHHSCGG-GTTCEEEECCCSCHHH
T ss_pred HHHHHHHHHHhCC-------------------CEEEEeCCcH---HHHHHHHHHHHHHhcccc-cCCcEEEEccCCCchH
Confidence 9999999998875 2467889985 678888888888764322 223445543 56678
Q ss_pred HHHHHHHHH
Q 010456 490 IGAALLAAS 498 (510)
Q Consensus 490 iGAAl~Aa~ 498 (510)
+|||.++.-
T Consensus 330 ~GAa~l~~~ 338 (343)
T 2yhw_A 330 LGAASMVLD 338 (343)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 899887643
No 19
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=99.68 E-value=5.3e-16 Score=154.94 Aligned_cols=278 Identities=17% Similarity=0.177 Sum_probs=181.4
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceee
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFT 177 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfT 177 (510)
.++++|+|||++|++++++.|+ ++.+. .++.+.. .+.+++++.|.+.+.+++.+ ...+|+.
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~~-----------~~~igi~ 62 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQ---IRDRR--ELPTPAS---QTPEALRDALSALVSPLQAH-----------AQRVAIA 62 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCSS---CCHHHHHHHHHHHHTTTGGG-----------CSEEEEE
T ss_pred eEEEEEeCCCEEEEEEECCCCC---EEEEE--EecCCCC---CCHHHHHHHHHHHHHHHHhh-----------CCEEEEE
Confidence 4799999999999999988663 44432 2444432 24678888888877766532 1248888
Q ss_pred eecccccccCCceEEEecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhccccC----CCCceEEEEe
Q 010456 178 FSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYH----DEDTVAAVII 253 (510)
Q Consensus 178 FSFPv~q~si~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~----~~~~~iglIl 253 (510)
.+.|++. ++|+++ ++- +++++.+.++.+.|++.+ ++|+ .+.||+.+..++..+. +. ..+.+++
T Consensus 63 ~pG~vd~---~~g~v~-~~~--~~~~w~~~~l~~~l~~~~---~~pv---~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~ 129 (289)
T 2aa4_A 63 STGIIRD---GSLLAL-NPH--NLGGLLHFPLVKTLEQLT---NLPT---IAINDAQAAAWAEFQALDGDIT-DMVFITV 129 (289)
T ss_dssp ESSEEET---TEEECS-SGG--GGGGGTTCCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHTSCTTCC-CEEEEEE
T ss_pred eccceeC---CCCEEE-eCC--CCCcccCCChHHHHHHHH---CCCE---EEechHHHHHHHHHHhCCCCCc-eEEEEEe
Confidence 8999884 456554 322 344577889999999988 7776 7899999999988643 33 8899999
Q ss_pred eCCcceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCccccccccCCCCCCccchhhhccccchHHHHHHHH
Q 010456 254 GTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVI 333 (510)
Q Consensus 254 GTGtNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl 333 (510)
|||..++++.+...+...++.. -|||..--+ |-.... .--+.| .+|..+|+..|-+..
T Consensus 130 GtGiG~gii~~G~l~~G~~g~a---------GE~Gh~~~~--~~g~~c-----~cG~~g--cle~~~s~~~l~~~~---- 187 (289)
T 2aa4_A 130 STGVGGGVVSGCKLLTGPGGLA---------GHIGHTLAD--PHGPVC-----GCGRTG--CVEAIASGRGIAAAA---- 187 (289)
T ss_dssp SSSEEEEEEETTEEECCTTSCC---------CCGGGSBSC--TTSCBC-----TTSCBS--BHHHHHSHHHHHHTC----
T ss_pred CccEEEEEEECCEEeeCCCCCC---------ccCCcEEEC--CCCCcC-----CCCCch--hHHHHhCHHHHHHHH----
Confidence 9999999997654433333322 244433100 000000 011233 789999986542211
Q ss_pred HHhhhcCCCCCCCchhhccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 010456 334 LRMSEESDIFGPASSRLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAA 413 (510)
Q Consensus 334 ~~l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa 413 (510)
.+ . . . ..+.+.+.+..++ .+ ..|..+.+++++..|.
T Consensus 188 ----~~--~-~-------~----------------~~~~~~v~~~a~~------gd--------~~a~~i~~~~~~~L~~ 223 (289)
T 2aa4_A 188 ----QG--E-L-------A----------------GADAKTIFTRAGQ------GD--------EQAQQLIHRSARTLAR 223 (289)
T ss_dssp ----CG--G-G-------T----------------TCCHHHHHHHHHT------TC--------HHHHHHHHHHHHHHHH
T ss_pred ----HH--h-c-------c----------------CCCHHHHHHHHHc------CC--------HHHHHHHHHHHHHHHH
Confidence 10 0 0 0 0122223233332 23 6677889999999999
Q ss_pred HHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEE---EcCCcchH
Q 010456 414 GIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILK---VTEDGSGI 490 (510)
Q Consensus 414 ~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~---~s~DgSgi 490 (510)
+|+.++..+++ -.|.+.|++. ..+.|.+.+++.+++...+ ..+.++ +.+|.+.+
T Consensus 224 ~i~~l~~~l~p-------------------~~ivlgG~~~-~~~~~~~~l~~~l~~~~~~---~~~~i~~~~~~~~a~~~ 280 (289)
T 2aa4_A 224 LIADIKATTDC-------------------QCVVVGGSVG-LAEGYLALVETYLAQEPAA---FHVDLLAAHYRHDAGLL 280 (289)
T ss_dssp HHHHHHHHHCC-------------------SEEEEEHHHH-TSTTHHHHHHHHHTTSCGG---GCCEEEECSCSSCHHHH
T ss_pred HHHHHHHhcCC-------------------CEEEEeCccc-ccHHHHHHHHHHHHHhcCc---cCCEEEECCCCCchHHH
Confidence 99999999875 2477899998 6789999999998875321 134444 35677889
Q ss_pred HHHHHH
Q 010456 491 GAALLA 496 (510)
Q Consensus 491 GAAl~A 496 (510)
|||.++
T Consensus 281 GAa~l~ 286 (289)
T 2aa4_A 281 GAALLA 286 (289)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
No 20
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=99.66 E-value=9.1e-15 Score=152.00 Aligned_cols=271 Identities=17% Similarity=0.136 Sum_probs=182.9
Q ss_pred cceeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHH---HHHHHHhhcCCCCCCCCCcc
Q 010456 95 EKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIAS---ALQQFVEKEGNGSEPPPIRR 171 (510)
Q Consensus 95 E~G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~---~i~~fl~~~~~~~~~~~~~~ 171 (510)
+.+.++++|+|||++|+++++ .| +++.+. ..++.|.. +.+++++.|++ .+.++++ .+.
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d-~G---~il~~~-~~~~~~~~----~~~~~l~~i~~~~~~i~~~~~----------~~i 67 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQ-GG---KEIADP-VVLPACAD----CLDKCLGNLVEGFKAIQAGLP----------EAP 67 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEE-TT---EECSCC-EEEECCTT----CHHHHHHHHHHHHHHHHTTCS----------SCC
T ss_pred CCCEEEEEEECcceEEEEEEE-CC---EEEEEE-EEEECCCC----CHHHHHHHHHHHHHHHHHHhh----------cCC
Confidence 456899999999999999998 66 344332 12444432 57888898888 6655542 135
Q ss_pred ccceeeeecccccccCCceEEEecccceecCCCC-CchHHHHHHHHHHhcCCCceEEEEEechHHHHhccccC-------
Q 010456 172 RELGFTFSFPVKQTSVSSGILIKWTKGFAIESMV-GQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYH------- 243 (510)
Q Consensus 172 l~lGfTFSFPv~q~si~~g~Li~wtKgF~~~~~~-G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~------- 243 (510)
..+|+.++.|++. ++|++..-+ ++++|. |.|+.+.|++.+ ++|| .|.||..+..++..+.
T Consensus 68 ~gIGIavPG~Vd~---~~G~i~~~~---nlp~w~~~~~l~~~L~~~~---g~PV---~veNDanaaAlgE~~~G~~p~~~ 135 (366)
T 3mcp_A 68 VAISFAFPGPADY---QAGIIGDLP---NFPSFRGGVALGPFLEDIF---GIPV---FINNDGSLFAYGEALTGVLPEIN 135 (366)
T ss_dssp CEEEEECCSSEET---TTTEECCCT---TCGGGTTCBCHHHHHHHHH---CSCE---EEECHHHHHHHHHHHTSHHHHHH
T ss_pred eEEEEEecceEeC---CCCEEEeCC---CcccccCCCCHHHHHHHHH---CCCE---EEechhhHHHHHHHHhCCCcccc
Confidence 6788888889983 467776544 566788 899999999998 8886 8999999999988643
Q ss_pred ----------CCCceEEEEeeCCcceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCccccccccCCCCCCc
Q 010456 244 ----------DEDTVAAVIIGTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPND 313 (510)
Q Consensus 244 ----------~~~~~iglIlGTGtNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~ 313 (510)
+.+..+.+.+|||..++++.+..-+...++...+-++|. | .-.+.|
T Consensus 136 ~~l~~~g~~~~~~~~v~l~lGtGIG~givi~G~l~~G~~g~AGEiGH~~-~----------------------~CG~~G- 191 (366)
T 3mcp_A 136 RRLREAGSTKRYKNLLGVTLGTGFGAGVVIDGELLRGDNAAGGYVWCLR-N----------------------KKYPEY- 191 (366)
T ss_dssp HHHHHTTCCCCCCEEEEEEESSSEEEEEEETTEECCCTTSCTTCCTTSB-C----------------------SSCTTS-
T ss_pred cccccccccCCCCcEEEEEECCcceEEEEECCEEecCCCCCCceeeccc-C----------------------CCCCCc-
Confidence 357899999999999999987554444444333444443 2 112334
Q ss_pred cchhhhccccchHHHHHHHHHHhhhcCCCCCCCchhhccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHH
Q 010456 314 QGFEKMISGMYLGDIVRRVILRMSEESDIFGPASSRLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVR 393 (510)
Q Consensus 314 q~fEKmiSG~YLGEivR~vl~~l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~ 393 (510)
.+|-.+||..|-+..+.... . . ...+.+.+.+..+. ....+.
T Consensus 192 -clE~~~S~~al~~~~~~~~~----~-------------~--------------~~~~~~~i~~~a~~---~~~gD~--- 233 (366)
T 3mcp_A 192 -IVEESVSIRAVMRVYAERSG----D-------------A--------------GARTPKEIFEIAEG---IRPGNR--- 233 (366)
T ss_dssp -BGGGTSSHHHHHHHHHHHSS----C-------------C--------------SCCCHHHHHHHHHT---SSCSCH---
T ss_pred -ceeeeecHHHHHHHHHHhhC----C-------------C--------------CCCCHHHHHHHHhh---hhcCCH---
Confidence 89999999988766554210 0 0 01112222222220 000110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCC
Q 010456 394 KLIVKICDVVTRRAARLAAAGIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGD 473 (510)
Q Consensus 394 ~~v~~I~~~V~~RaA~L~Aa~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~ 473 (510)
..|..+.+++++..|.+|+.++..++ + .|.+.|++....+.|.+.+++.+++.+.+
T Consensus 234 ----~~a~~~l~~~~~~Lg~~i~nl~~~ld-------------------P-~IviGGgi~~~~~~~~~~l~~~l~~~~~~ 289 (366)
T 3mcp_A 234 ----EAAIAAFEELGEMAGDALASAITLID-------------------G-LIVIGGGLSGASKYILPVLLKEMNAQTGM 289 (366)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHC-------------------S-EEEEESGGGGGHHHHHHHHHHHHHHHTTC
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHC-------------------C-EEEEEChhhhchHHHHHHHHHHHHHhcch
Confidence 45667889999999999999998885 3 67899999998999999999999987655
Q ss_pred CCcccEEEE
Q 010456 474 DIAQHVILK 482 (510)
Q Consensus 474 ~~~~~v~l~ 482 (510)
.....+.+.
T Consensus 290 ~~~~~~~i~ 298 (366)
T 3mcp_A 290 MDGARFGRL 298 (366)
T ss_dssp C--------
T ss_pred hccCCceEE
Confidence 444455555
No 21
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=99.64 E-value=2.6e-14 Score=146.18 Aligned_cols=302 Identities=20% Similarity=0.232 Sum_probs=177.4
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCC-cccccee
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPI-RRRELGF 176 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~-~~l~lGf 176 (510)
.+|+||+|||++|++++++.|+ ++.+.. .+ |......+.+++++.|++.|.+++++.+.. .. +...+|+
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~---i~~~~~--~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~----~~~~i~gigi 76 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGK---ILAEAD--GL-STNHWLIGTDKCVERINEMVNRAKRKAGVD----PLVPLRSLGL 76 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSC---EEEEEE--EC-CCCHHHHCHHHHHHHHHHHHHHHHHHHTCC----TTCCBSEEEE
T ss_pred EEEEEEcCccceEEEEEeCCCC---EEEEEe--CC-CCCcccCCHHHHHHHHHHHHHHHHHhcCCC----cccceeEEEE
Confidence 6899999999999999998763 443321 21 222211257889999999999999875421 12 3456788
Q ss_pred eeecccccccCCceEEEecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhccccCCCCceEEEEeeCC
Q 010456 177 TFSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTG 256 (510)
Q Consensus 177 TFSFPv~q~si~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~~~~~~iglIlGTG 256 (510)
..+.|++.. .+.++.+.|++.+...++|| .|.||+.+..++ .+ .+..+.+++|||
T Consensus 77 ~~pG~vd~~-------------------~~~~l~~~l~~~~~~~~~pv---~v~NDa~aaa~a-~~--~~~~v~v~~GTG 131 (347)
T 2ch5_A 77 SLSGGDQED-------------------AGRILIEELRDRFPYLSESY---LITTDAAGSIAT-AT--PDGGVVLISGTG 131 (347)
T ss_dssp EETTTTCHH-------------------HHHHHHHHHHHHCTTSBSCE---EEEEHHHHHHHH-HC--SSCEEEEEESSS
T ss_pred eccCCCchH-------------------HHHHHHHHHHHhcCCCCceE---EEECcHHHHHHh-hC--CCCcEEEEEcCC
Confidence 888888743 12355555555441112565 889999999999 44 356789999999
Q ss_pred cceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCccccccccCCCCCCccchhhhccccchHHHHHHHHHHh
Q 010456 257 TNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRM 336 (510)
Q Consensus 257 tNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl~~l 336 (510)
.+++.+.+ .+..+-.-+||.+- -| -.||.|++........+.
T Consensus 132 ig~~~v~~-------------~G~~c~cG~~G~l~--------~d-----------------e~s~~~i~~~~~~~~~~~ 173 (347)
T 2ch5_A 132 SNCRLINP-------------DGSESGCGGWGHMM--------GD-----------------EGSAYWIAHQAVKIVFDS 173 (347)
T ss_dssp EEEEEECT-------------TSCEEEEECCCTTT--------CC-----------------TTSHHHHHHHHHHHHHHH
T ss_pred ceeEEEcC-------------CCCEEecCCcCccc--------CC-----------------CccHHHHHHHHHHHHHHH
Confidence 99987752 23444444555441 01 136778876444332221
Q ss_pred hhcCCCCCCCc-----hhhccCCCCCh--hhhhhhccCCC-cc----HHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 010456 337 SEESDIFGPAS-----SRLSMAFILRT--PLMAAMHEDDS-PE----LTEVARILNDVLEIPDVPLKVRKLIVKICDVVT 404 (510)
Q Consensus 337 ~~~~~lF~~~p-----~~l~~~~~l~t--~~ls~i~~d~s-~~----~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~ 404 (510)
.. +......| +.+...+.+++ ..+..+..+.. .+ .+.+.+..++ .+ ..|..+.
T Consensus 174 ~d-g~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~------gD--------~~a~~il 238 (347)
T 2ch5_A 174 ID-NLEAAPHDIGYVKQAMFHYFQVPDRLGILTHLYRDFDKCRFAGFCRKIAEGAQQ------GD--------PLSRYIF 238 (347)
T ss_dssp HH-TSSCCSSCCHHHHHHHHHHHTCSSHHHHHTTTTTTCCHHHHHTTHHHHHHHHHT------TC--------HHHHHHH
T ss_pred Hh-CCCCCCCCccHHHHHHHHHhCCCCHHHHHHHHhcCCcHHHHHHHHHHHHHHHHc------CC--------HHHHHHH
Confidence 11 10000000 01111111110 00111111100 00 1111111111 22 6788899
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhh--CCC-CcccEEE
Q 010456 405 RRAARLAAAGIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDIL--GDD-IAQHVIL 481 (510)
Q Consensus 405 ~RaA~L~Aa~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~--~~~-~~~~v~l 481 (510)
+|+++..|.+|+.++..+++.... ......|.+.|++.+..|.|.+.+++.+++.. +.. ....|.+
T Consensus 239 ~~~~~~La~~i~~l~~~~~p~~~~-----------~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~ 307 (347)
T 2ch5_A 239 RKAGEMLGRHIVAVLPEIDPVLFQ-----------GKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTL 307 (347)
T ss_dssp HHHHHHHHHHHHHHGGGSCGGGGC-----------STTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcccccc-----------cCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEE
Confidence 999999999999999998763100 01225788999999999999999999998874 221 1235655
Q ss_pred EEcCCcchHHHHHHHHH
Q 010456 482 KVTEDGSGIGAALLAAS 498 (510)
Q Consensus 482 ~~s~DgSgiGAAl~Aa~ 498 (510)
....+.+.+|||.++.-
T Consensus 308 ~~~~~a~~~GAa~la~~ 324 (347)
T 2ch5_A 308 MKLRHSSALGGASLGAR 324 (347)
T ss_dssp EEESSCTHHHHHHHHHH
T ss_pred EecCCChHHHHHHHHHH
Confidence 55566888999988754
No 22
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=99.64 E-value=9.1e-15 Score=146.33 Aligned_cols=276 Identities=18% Similarity=0.215 Sum_probs=177.3
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceee
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFT 177 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfT 177 (510)
.+++||+|||++|++++++.|+ ++.+. .++.| .+.+++++.|.+.+. + . +...+|+.
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~---il~~~--~~~~~-----~~~~~~~~~i~~~i~----~-~--------~i~gigi~ 61 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGK---ILDKT--SISTP-----ENLEDLLAWLDQRLS----E-Q--------DYSGIAMS 61 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCC---EEEEE--EECCC-----SSHHHHHHHHHHHHT----T-S--------CCSEEEEE
T ss_pred EEEEEEECCCEEEEEEECCCCC---EEEEE--EEeCC-----CCHHHHHHHHHHHHH----h-C--------CCcEEEEE
Confidence 4899999999999999988663 44332 24444 145666665554443 2 1 24668888
Q ss_pred eecccccccCCceEEEecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhcccc--CCCCceEEEEeeC
Q 010456 178 FSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY--HDEDTVAAVIIGT 255 (510)
Q Consensus 178 FSFPv~q~si~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay--~~~~~~iglIlGT 255 (510)
.+.|++. ++|++...+ +++++.+.++.+.| +.+ ++|| .+.||+.+..++..+ .+.+..+.+++||
T Consensus 62 ~pG~vd~---~~g~v~~~~---~~~~~~~~~l~~~l-~~~---~~pv---~v~NDa~aaa~~e~~~~~~~~~~v~l~~Gt 128 (292)
T 2gup_A 62 VPGAVNQ---ETGVIDGFS---AVPYIHGFSWYEAL-SSY---QLPV---HLENDANCVGLSELLAHPELENAACVVIGT 128 (292)
T ss_dssp ESSEECT---TTCBEESCC---SSGGGSSSBHHHHT-GGG---CCCE---EEEEHHHHHHHHHHHHCTTCSSEEEEEESS
T ss_pred ecCcccC---CCCEEEecC---CCCcccCCCHHHHH-HHc---CCCE---EEechHHHHHHHHHHhcCCCCeEEEEEECC
Confidence 8888874 356665433 33445677888877 665 7776 889999999998754 4567899999999
Q ss_pred CcceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCccccccccCCCCCCccchhhhccccchHHHHHHHHHH
Q 010456 256 GTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILR 335 (510)
Q Consensus 256 GtNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl~~ 335 (510)
|..++++.+..-+...++...+-++|.++ . ...+. ..+|..+|+..|-+.++...
T Consensus 129 GiG~giv~~G~l~~G~~g~aGEiGh~~~~-----------------~----~~~~~--gcle~~~s~~~l~~~~~~~~-- 183 (292)
T 2gup_A 129 GIGGAMIINGRLHRGRHGLGGEFGYMTTL-----------------A----PAEKL--NNWSQLASTGNMVRYVIEKS-- 183 (292)
T ss_dssp SEEEEEEETTEEECCTTSCTTCGGGCBSS-----------------C----CSSSC--CBHHHHHSHHHHHHHHHHHH--
T ss_pred ceEEEEEECCEEEecCCCCCccceeEEec-----------------c----CCCCC--CcHHHhcCHHHHHHHHHHhh--
Confidence 99999997654433333322222222221 1 00022 37899999877654433210
Q ss_pred hhhcCCCCCCCchhhccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010456 336 MSEESDIFGPASSRLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAAGI 415 (510)
Q Consensus 336 l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa~i 415 (510)
+. . .+ +.+.+.+..++ .+ ..|..+.+++++..|.+|
T Consensus 184 ----~~--~----------~~--------------~~~~v~~~a~~------gd--------~~a~~i~~~~~~~L~~~i 219 (292)
T 2gup_A 184 ----GH--T----------DW--------------DGRKIYQEAAA------GN--------ILCQEAIERMNRNLAQGL 219 (292)
T ss_dssp ----SS--C----------CC--------------CHHHHHHHHHT------TC--------HHHHHHHHHHHHHHHHHH
T ss_pred ----CC--C----------CC--------------CHHHHHHHHHc------CC--------HHHHHHHHHHHHHHHHHH
Confidence 00 0 00 12222222222 23 567789999999999999
Q ss_pred HHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCC----CcccEEEE-EcCCcchH
Q 010456 416 VGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDD----IAQHVILK-VTEDGSGI 490 (510)
Q Consensus 416 aaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~----~~~~v~l~-~s~DgSgi 490 (510)
+.++..+++ -.|.+.|++. ..+.|.+.+++.+++..... ....|..- +.+|...+
T Consensus 220 ~~l~~~l~p-------------------~~IvlgG~i~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~ 279 (292)
T 2gup_A 220 LNIQYLIDP-------------------GVISLGGSIS-QNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLY 279 (292)
T ss_dssp HHHHHHHCC-------------------SEEEEESGGG-GCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHH
T ss_pred HHHHHHhCC-------------------CEEEEeCccc-cchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHH
Confidence 999999875 2477889995 57899999999998764321 11234332 45778899
Q ss_pred HHHHHHHH
Q 010456 491 GAALLAAS 498 (510)
Q Consensus 491 GAAl~Aa~ 498 (510)
|||.++.-
T Consensus 280 GAa~~~~~ 287 (292)
T 2gup_A 280 GALVNWLQ 287 (292)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987643
No 23
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=99.60 E-value=2.7e-14 Score=144.96 Aligned_cols=285 Identities=17% Similarity=0.172 Sum_probs=168.6
Q ss_pred cceeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccc
Q 010456 95 EKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRREL 174 (510)
Q Consensus 95 E~G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~l 174 (510)
+.+.++++|+|||++|++++++.|+ ++.+. +++.|+. ..+++++.|.+.|.+++++.. .+...+
T Consensus 5 ~~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~-------~~i~gi 68 (310)
T 3htv_A 5 QHNVVAGVDMGATHIRFCLRTAEGE---TLHCE--KKRTAEV----IAPGLVSGIGEMIDEQLRRFN-------ARCHGL 68 (310)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEEHHHH----HTTCHHHHHHHHHHHHHHHHT-------EEEEEE
T ss_pred CCCEEEEEEeCCCEEEEEEECCCCC---EEEEE--EecCccc----cHHHHHHHHHHHHHHHHHhcC-------CCeeEE
Confidence 4578999999999999999999763 44432 2333321 246788888888888876543 124668
Q ss_pred eeeeecccccccCCceEEEecccceecCCC--CCchHHHHHHHHHHhcCCCceEEEEEechHHHHhcccc---CCCCceE
Q 010456 175 GFTFSFPVKQTSVSSGILIKWTKGFAIESM--VGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY---HDEDTVA 249 (510)
Q Consensus 175 GfTFSFPv~q~si~~g~Li~wtKgF~~~~~--~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay---~~~~~~i 249 (510)
|+..+.|++. ++|+++..+ +++.. .+.++.+.|++.+ ++|| .+.||+.+..++... .+.+..+
T Consensus 69 gi~~pG~vd~---~~g~v~~~~---~l~~~~~~~~~l~~~l~~~~---~~pv---~v~NDanaaa~~e~~~~~~~~~~~~ 136 (310)
T 3htv_A 69 VMGFPALVSK---DKRTIISTP---NLPLTAADLYDLADKLENTL---NCPV---EFSRDVNLQLSWDVVENRLTQQLVL 136 (310)
T ss_dssp EEEESSCBCT---TSSCBCSCC---SSSCCHHHHTTHHHHHHHHH---TSCE---EEEEHHHHHHHHHHHHTTCTTSCEE
T ss_pred EEeccccEeC---CCCEEEeCC---CCCCccccCccHHHHHHHHh---CCCE---EEeeHHHHHHHHHHhhcccCCceEE
Confidence 8888888873 345554332 22211 1257888888888 7887 889999988765432 3456789
Q ss_pred EEEeeCCcceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCccccccccCCCCCCccchhhhccccchHHHH
Q 010456 250 AVIIGTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIV 329 (510)
Q Consensus 250 glIlGTGtNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEiv 329 (510)
.+.+|||..++.+.+.+-+...++...+-++|.|+-. + +.+ .-.+.| .+|.++||..|-+..
T Consensus 137 ~v~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~~-------g-~~C--------~cG~~G--clE~~~S~~al~~~~ 198 (310)
T 3htv_A 137 AAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDM-------T-QHC--------ACGNPG--CLETNCSGMALRRWY 198 (310)
T ss_dssp EEEESSSEEEEEEETTEEECCSSSCCCC---------------------------------------CCSSSHHHHHHHH
T ss_pred EEEeceeEEEEEEECCEEeecCCCCceeCcceEeCCC-------C-CcC--------CCCCCc--eehhhhCHHHHHHHH
Confidence 9999999999999876655555555555566665420 0 000 011334 789999998764322
Q ss_pred HHHHHHhhhcCCCCCCCchhhccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010456 330 RRVILRMSEESDIFGPASSRLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAAR 409 (510)
Q Consensus 330 R~vl~~l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~ 409 (510)
+ +.+ . .++.+.+. +..+ .+ ..++.+.++.|+
T Consensus 199 ~-------~~~---~----------~~~~~~~~--------------~~~~-------~d--------~~~~~~~~~~a~ 229 (310)
T 3htv_A 199 E-------QQP---R----------NYPLRDLF--------------VHAE-------NA--------PFVQSLLENAAR 229 (310)
T ss_dssp T-------TSC---C----------SSCGGGHH--------------HHHT-------TC--------HHHHHHHHHHHH
T ss_pred H-------hcc---C----------CCCHHHHH--------------HHHc-------CC--------hHHHHHHHHHHH
Confidence 1 000 0 01111111 1110 11 233344444443
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhC-CCCcccEEEEE---cC
Q 010456 410 LAAAGIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILG-DDIAQHVILKV---TE 485 (510)
Q Consensus 410 L~Aa~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~-~~~~~~v~l~~---s~ 485 (510)
+|+.++..+++ -.|.+.|++.+..+.|.+.+.+.+++.+. +.....+.++. .+
T Consensus 230 ----~la~l~~~~dP-------------------~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~ 286 (310)
T 3htv_A 230 ----AIATSINLFDP-------------------DAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSD 286 (310)
T ss_dssp ----HHHHHHHHHCC-------------------SEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCT
T ss_pred ----HHHHHHHhhCC-------------------CEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCC
Confidence 56666677765 35778999988777778888888877653 11123566664 56
Q ss_pred CcchHHHHHHHH
Q 010456 486 DGSGIGAALLAA 497 (510)
Q Consensus 486 DgSgiGAAl~Aa 497 (510)
|.+.+|||.++.
T Consensus 287 ~ag~~GAa~la~ 298 (310)
T 3htv_A 287 FNGAQGAAILAH 298 (310)
T ss_dssp THHHHHHHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 888999998763
No 24
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=99.57 E-value=2.3e-14 Score=148.79 Aligned_cols=294 Identities=13% Similarity=0.071 Sum_probs=179.6
Q ss_pred eeEEEEEeCCceeEEEEEEE----cCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccc
Q 010456 97 GIYYALDLGGTNFRVLRVQL----GGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRR 172 (510)
Q Consensus 97 G~~LalDlGGTN~RV~~V~l----~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l 172 (510)
+.+|++|+|||++|++++++ .| .+..+.. ..|. .+.+++++.|++.+.++..... .+..
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~~~~~~g---~il~~~~---~~~~----~~~~~~~~~i~~~i~~~~~~~~-------~~i~ 91 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVREGKNDSV---HACVTRY---SMKR----KDITEIIEFFNEIIELMPASVM-------KRVK 91 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEECGGGCE---EEEEEEE---ECTT----CBGGGHHHHHHHHHHHSCHHHH-------TTEE
T ss_pred CeEEEEEEccccEEEEEEecccCCCc---cEEEEee---ecCC----CCHHHHHHHHHHHHHHHhhccc-------cccc
Confidence 47899999999999999998 44 3443321 1232 2467788888888777543321 1245
Q ss_pred cceeeeecccccccCCceEEEecccceecCCCCCc-hHHHHHHHHHHhcCC-CceEEEEEechHHHHhc-----------
Q 010456 173 ELGFTFSFPVKQTSVSSGILIKWTKGFAIESMVGQ-EVTESLQRALDKRGL-DMRVAALVNDTVGTLAL----------- 239 (510)
Q Consensus 173 ~lGfTFSFPv~q~si~~g~Li~wtKgF~~~~~~G~-dv~~lL~~al~r~~l-~v~V~alvNDTVgTlla----------- 239 (510)
.+|+.++.|++. |++. .+ .+++.+. ++.+++++.+ ++ || .|.||..+..++
T Consensus 92 gigi~~pG~vd~-----g~v~-~~----~~~~~~~~~l~~~l~~~~---~~~pv---~v~NDa~aaalge~~l~~~~~~~ 155 (373)
T 2q2r_A 92 AGVINVPGPVTG-----GAVG-GP----FNNLKGIARLSDYPKALF---PPGHS---AILNDLEAGGFGVLAVSDAHVFS 155 (373)
T ss_dssp EEEEEESSCEET-----TTEE-CC----CSSSBSCEEGGGSCTTTS---CTTSE---EEEEHHHHHHHHHHHHHHTTCHH
T ss_pred EEEEEeeccccC-----CEEe-cc----CCCCCCcCCHHHHHHHhc---CCCCE---EEEccHhHHhccccccChhhhcc
Confidence 688888888885 4443 21 2344453 6665555443 55 55 899999999998
Q ss_pred ----ccc----------------CCCCceEEEEeeCCcceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCc
Q 010456 240 ----GHY----------------HDEDTVAAVIIGTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTS 299 (510)
Q Consensus 240 ----~ay----------------~~~~~~iglIlGTGtNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~ 299 (510)
..+ .+.+..+.+++|||.+++++.+..... +.-..-.|||...-+.-..+.
T Consensus 156 ~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTGiG~gii~~g~l~~---------G~~~~aGE~Gh~~~~~~~~c~ 226 (373)
T 2q2r_A 156 EYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTGLGSSLIYYNPPMN---------QHIVVPLELGSQTLPMRKDID 226 (373)
T ss_dssp HHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSSEEEEEEEECC------------CEEEEEECGGGSBCCCSSCHH
T ss_pred ccchhhcccccccccccCCCcCcCCCCCEEEEEeCCceeEEEEecCcccC---------CCcccccccceeecCCCCCcc
Confidence 332 234788999999999999998643222 334556688765211000000
Q ss_pred cccccccCCCCCCccchhhhccccchHHHHHHHHHHhhhcCCCCCCCchhhccCCCCChhhhhhhccCCCccHHHHHHHH
Q 010456 300 YDIDLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSEESDIFGPASSRLSMAFILRTPLMAAMHEDDSPELTEVARIL 379 (510)
Q Consensus 300 ~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~vl~~l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il 379 (510)
....+-....+ .-.+|.++||..|-++.+... . +. ++ .+ +...+.+..
T Consensus 227 cg~~l~~~~~~--~g~lE~~~S~~~l~~~~~~~~----~-~~-----~~------~~--------------~~~~i~~~a 274 (373)
T 2q2r_A 227 YIQTLHAELKL--FPNYENMVSGAGLEFHYRQVV----R-GS-----RP------PC--------------SAGEIAKLA 274 (373)
T ss_dssp HHHHHHHHHTS--CCBHHHHSSHHHHHHHHHHHH----T-TS-----SC------CC--------------CHHHHHHHH
T ss_pred hhHHHHHHhhc--cccHhHhcCHHHHHHHHHHHh----c-CC-----CC------CC--------------CHHHHHHHH
Confidence 00000000001 237999999999977655421 0 10 00 01 122222222
Q ss_pred HhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhH
Q 010456 380 NDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAAGIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLF 459 (510)
Q Consensus 380 ~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f 459 (510)
.+ .+ ..|..+.+++++..|.+++.++..+++ . .|.+.|+.+.+.+.|
T Consensus 275 ~~------gD--------~~a~~~l~~~~~~L~~~i~~l~~~l~p-----------------~--~IvlgGG~~~~~~~~ 321 (373)
T 2q2r_A 275 SE------GD--------ANACKAMKKYHEYLMRVGSEASMALLP-----------------L--TIVLVGDNIVNNAFF 321 (373)
T ss_dssp HT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHHCC-----------------S--EEEECSHHHHHTHHH
T ss_pred Hc------CC--------HHHHHHHHHHHHHHHHHHHHHHHHHCC-----------------C--EEEEeCChHhCchhh
Confidence 22 23 568889999999999999999999975 2 477878855555888
Q ss_pred HH--HHHHHHHhhhCCCC------cccEEEE---EcCCcchHHHHHHHH
Q 010456 460 RE--YLHEALTDILGDDI------AQHVILK---VTEDGSGIGAALLAA 497 (510)
Q Consensus 460 ~~--~l~~~l~~l~~~~~------~~~v~l~---~s~DgSgiGAAl~Aa 497 (510)
.+ .+++.+++.+.+.. ...+.+. +.+|.+.+|||.++.
T Consensus 322 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~l~GAa~l~~ 370 (373)
T 2q2r_A 322 YRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRCGL 370 (373)
T ss_dssp HHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSCCCHHHHHHHHHHH
T ss_pred hcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecCCchhHHHHHHHHH
Confidence 88 88888876543221 1234433 457889999998763
No 25
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=99.52 E-value=1.1e-13 Score=139.97 Aligned_cols=269 Identities=13% Similarity=0.177 Sum_probs=171.5
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceee
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFT 177 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfT 177 (510)
.++++|+|||++|++++++.|+ ++.+. .++.| +.+++++.|++ ++++. +...+|+.
T Consensus 4 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~t~------~~~~~l~~i~~----~~~~~---------~i~gigi~ 59 (302)
T 3epq_A 4 MLGGIEAGGTXFVCAVGREDGT---IIDRI--EFPTX------MPDETIEXVIQ----YFSQF---------SLQAIGIG 59 (302)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEE--EEECC------CHHHHHHHHHH----HHTTS---------CCSEEEEE
T ss_pred EEEEEEECcceeEEEEEECCCc---EEEEE--EecCC------ChHHHHHHHHH----HhccC---------CceEEEEE
Confidence 5899999999999999988663 44432 23332 34566665554 33321 25778999
Q ss_pred eeccccccc--CCceEEEecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhcccc----CCCCceEEE
Q 010456 178 FSFPVKQTS--VSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHY----HDEDTVAAV 251 (510)
Q Consensus 178 FSFPv~q~s--i~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay----~~~~~~igl 251 (510)
.+.|++... ...|++...+ ..+|.+.++.+.|++.+ ++|| .+.||..+..++..+ .+.+..+.+
T Consensus 60 ~pG~vd~~~~~~~~G~i~~~~----~~~w~~~~l~~~l~~~~---~~pV---~v~NDanaaalaE~~~G~~~~~~~~~~l 129 (302)
T 3epq_A 60 SFGPVDNDXTSQTYGTITATP----XAGWRHYPFLQTVXNEM---XIPV---GFSTDVNAAALGEFLFGEAXGLDSCLYI 129 (302)
T ss_dssp ECSSEECCTTSTTTTEECCCS----STTTBTCCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHSTTTTCSCEEEE
T ss_pred eceeeccccccccccEEecCC----CCCccCCChHHHHHHHh---CCCE---EEechhHHHHHHHHHhCCCCCCCcEEEE
Confidence 999998532 1226665443 35788999999999988 8887 899999999999875 356789999
Q ss_pred EeeCCcceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCccccccccCCCCCCccchhhhccccchHHHHHH
Q 010456 252 IIGTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLGDIVRR 331 (510)
Q Consensus 252 IlGTGtNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivR~ 331 (510)
.+|||..++++.+..-+.... ..|+|..--+ | ..-|... ..-.. |.-.+|.++||..|-+..+.
T Consensus 130 ~~GtGiG~gii~~G~l~~G~~-----------agEiGh~~v~--~-~~~~~~~-~~C~~-~~gclE~~~S~~al~~~~~~ 193 (302)
T 3epq_A 130 TIGTGIGAGAIVEGRLLQGLS-----------HPEMGHIYIR--R-HPDDVYQ-GXCPY-HGDCFEGLASGPAIEARWGX 193 (302)
T ss_dssp EESSSEEEEEEETTEECCSSS-----------CCCGGGCCCC--C-CTTCCCC-CSBTT-TBSSHHHHHSHHHHHHHHSS
T ss_pred EECCceEEEEEECCEEcccCC-----------CCccceEEEe--c-CCCCCcC-cccCC-CCcchhhhCCHHHHHHHhhc
Confidence 999999999998643322211 1355533100 0 0000000 00000 11389999999877432110
Q ss_pred HHHHhhhcCCCCCCCchhhccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010456 332 VILRMSEESDIFGPASSRLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLA 411 (510)
Q Consensus 332 vl~~l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~ 411 (510)
. .. .+ . . +..+.++++++.
T Consensus 194 -------~-------~~-----------~~------------------------~-~-----------~~~~~~~~~~~L 212 (302)
T 3epq_A 194 -------K-------AA-----------DL------------------------S-D-----------IAQVWELEGYYI 212 (302)
T ss_dssp -------C-------GG-----------GG------------------------T-T-----------CHHHHHHHHHHH
T ss_pred -------c-------cc-----------cc------------------------c-c-----------hHHHHHHHHHHH
Confidence 0 00 00 0 0 123567789999
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCc-------ccEEEE--
Q 010456 412 AAGIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIA-------QHVILK-- 482 (510)
Q Consensus 412 Aa~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~-------~~v~l~-- 482 (510)
|.+|+.++..+++ -.|.+.|++... +.|.+.+++.+++.+..... ..+.++
T Consensus 213 a~~i~nl~~~ldP-------------------e~IviGGgi~~~-~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s 272 (302)
T 3epq_A 213 AQALAQYILILAP-------------------XXIILGGGVMQQ-XQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPP 272 (302)
T ss_dssp HHHHHHHHHHTCC-------------------SCEEEESSGGGC-THHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECC
T ss_pred HHHHHHHHHHHCc-------------------hhhhcCchhhhh-HHHHHHHHHHHHHHHhhhccCcccccccCceEEEC
Confidence 9999999999986 246688998765 55889999998877532110 112344
Q ss_pred -EcCCcchHHHHHHHH
Q 010456 483 -VTEDGSGIGAALLAA 497 (510)
Q Consensus 483 -~s~DgSgiGAAl~Aa 497 (510)
+.+|+..+|||.++-
T Consensus 273 ~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 273 RLGSNAGIIGTLVLAH 288 (302)
T ss_dssp TTGGGHHHHHHHHHHH
T ss_pred CcCChHHHHHHHHHHH
Confidence 456888999998774
No 26
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=99.50 E-value=1e-12 Score=134.19 Aligned_cols=290 Identities=15% Similarity=0.171 Sum_probs=170.2
Q ss_pred ceeEEEEEeCCceeEEEEEEE-cCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccc
Q 010456 96 KGIYYALDLGGTNFRVLRVQL-GGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRREL 174 (510)
Q Consensus 96 ~G~~LalDlGGTN~RV~~V~l-~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~l 174 (510)
.+.+|++|+||||+|++++++ .+ .+... ..+|... .+.+. +.|.+++++.. .+...+
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g---~i~~~----~~~~~~~----~~~~~----~~i~~~~~~~~-------~~i~gi 70 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASG---EISQA----KTYSGLD----YPSLE----AVIRVYLEEHK-------VEVKDG 70 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTC---CEEEE----EEEEGGG----CSCHH----HHHHHHHHHSC-------CCCCEE
T ss_pred CCEEEEEEechhheEEEEEECCCC---cEEEE----EEecCCC----cCCHH----HHHHHHHHhcC-------CCccEE
Confidence 467999999999999999997 34 34332 1223211 12233 34445555432 124568
Q ss_pred eeeeecccccccCCceEEEecccceecCCCCCchHHHHHHHHHHhcCCC-ceEEEEEechHHHHhccccC----------
Q 010456 175 GFTFSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLD-MRVAALVNDTVGTLALGHYH---------- 243 (510)
Q Consensus 175 GfTFSFPv~q~si~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~-v~V~alvNDTVgTlla~ay~---------- 243 (510)
|+.++.|++ .+++ ..+ ++ +|. .+ .+.|++.+ ++| | .|.||..+..++..+.
T Consensus 71 gi~~pG~vd-----~~~~-~~~---nl-~w~-~~-~~~l~~~~---~~p~V---~v~NDanaaalgE~~~~~~~~~~~g~ 132 (332)
T 1sz2_A 71 CIAIACPIT-----GDWV-AMT---NH-TWA-FS-IAEMKKNL---GFSHL---EIINDFTAVSMAIPMLKKEHLIQFGG 132 (332)
T ss_dssp EEEESSCCC-----SSEE-CCS---SS-CCC-EE-HHHHHHHH---TCSEE---EEEEHHHHHHHHGGGCCGGGEEECSS
T ss_pred EEEEeCcee-----CCEE-eee---CC-CCc-CC-HHHHHHHh---CCCcE---EEEeCHhHHhccccccChhhheecCC
Confidence 888899997 2443 222 22 343 45 56777777 777 6 8899999999998742
Q ss_pred ----CCCceEEEEeeCCcceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCcccccccc-CCCCCCccchhh
Q 010456 244 ----DEDTVAAVIIGTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDA-ESPNPNDQGFEK 318 (510)
Q Consensus 244 ----~~~~~iglIlGTGtNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~-~S~nPG~q~fEK 318 (510)
+.+..+.+++|||..++++.+.. .. .--.-.|+|... ..|.++.+..+-. --.+-|.-.+|.
T Consensus 133 g~~~~~~~~~~v~~GTGiG~giv~~g~--~G---------~~g~agE~GH~~--v~~~~~~~~~l~~~~c~~~g~gclE~ 199 (332)
T 1sz2_A 133 AEPVEGKPIAVYGAGTGLGVAHLVHVD--KR---------WVSLPGEGGHVD--FAPNSEEEAIILEILRAEIGHVSAER 199 (332)
T ss_dssp CCCCTTCCEEEEEESSSEEEEEEEEET--TE---------EEEEECCGGGSB--CCCCSHHHHHHHHHHHHHSSSCBGGG
T ss_pred CCCCCCCcEEEEEcCccceEEEEecCC--CC---------eeeCCCCccccC--cCCCChHHHHHHHHHHhccCCcchhh
Confidence 34678999999999999998643 22 223445555431 0111110000000 000112338999
Q ss_pred hccccchHHHHHHHHHHhhhcCCCCCCCchhhccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCC-CHHHHHHHH
Q 010456 319 MISGMYLGDIVRRVILRMSEESDIFGPASSRLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDV-PLKVRKLIV 397 (510)
Q Consensus 319 miSG~YLGEivR~vl~~l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~-~~~d~~~v~ 397 (510)
++||..|-+..+...... .. .+ ...+.+.+.+..++ . +
T Consensus 200 ~~S~~~l~~~~~~~~~~~---~~----------~~--------------~~~~~~~i~~~a~~------G~D-------- 238 (332)
T 1sz2_A 200 VLSGPGLVNLYRAIVKAD---NR----------LP--------------ENLKPKDITERALA------DSC-------- 238 (332)
T ss_dssp TSSHHHHHHHHHHHHHHT---TC----------CC--------------CCCCHHHHHHHHHH------TCC--------
T ss_pred hccHHHHHHHHHHHhhcc---CC----------Cc--------------cCCCHHHHHHHHHc------CCC--------
Confidence 999999877766532110 00 00 01122223233332 2 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeec-HhHH-HHHHHHHHh--hhCC
Q 010456 398 KICDVVTRRAARLAAAGIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSY-TLFR-EYLHEALTD--ILGD 473 (510)
Q Consensus 398 ~I~~~V~~RaA~L~Aa~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~-p~f~-~~l~~~l~~--l~~~ 473 (510)
..|..+.++++++.|.+|+.++..+++. .-|.+.|++.... +.|. +.+++.+++ .+..
T Consensus 239 ~~A~~~~~~~~~~Lg~~i~~l~~~l~P~------------------~gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~ 300 (332)
T 1sz2_A 239 TDCRRALSLFCVIMGRFGGNLALNLGTF------------------GGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKE 300 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCT------------------TEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCC------------------eEEEEEChhhhhHHHHhccHHHHHHHHhcCchhh
Confidence 6788899999999999999999999862 1267899998764 3333 245555542 1110
Q ss_pred -CCcccEEEEEcCCcchHHHHHHHH
Q 010456 474 -DIAQHVILKVTEDGSGIGAALLAA 497 (510)
Q Consensus 474 -~~~~~v~l~~s~DgSgiGAAl~Aa 497 (510)
.....|.+...+|...+|||.++.
T Consensus 301 ~~~~~~i~~~~~~~a~l~GAa~l~~ 325 (332)
T 1sz2_A 301 YVHDIPVYLIVHDNPGLLGSGAHLR 325 (332)
T ss_dssp HHTTCCEEEECCSCHHHHHHHHHHH
T ss_pred HHhCceEEEEECCchhHHHHHHHHH
Confidence 001245555677889999998764
No 27
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=99.43 E-value=2e-12 Score=128.09 Aligned_cols=249 Identities=16% Similarity=0.222 Sum_probs=163.7
Q ss_pred CccceeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccc
Q 010456 93 GSEKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRR 172 (510)
Q Consensus 93 G~E~G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l 172 (510)
..+...++++|+|||++|++++++.+. .+... ...++.|.. .+.+++++.|.+.+.++++..... ....
T Consensus 8 ~~~~~~~lgidiggt~i~~~l~dl~~g--~i~~~-~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~~~-----~~~~ 76 (267)
T 1woq_A 8 SHKNAPLIGIDIGGTGIKGGIVDLKKG--KLLGE-RFRVPTPQP---ATPESVAEAVALVVAELSARPEAP-----AAGS 76 (267)
T ss_dssp ---CCCEEEEEECSSEEEEEEEETTTT--EEEEE-EEEEECCSS---CCHHHHHHHHHHHHHHHHTSTTCC-----CTTC
T ss_pred cCCCCEEEEEEECCCEEEEEEEECCCC--eEEEE-EEecCCCcc---CCHHHHHHHHHHHHHHHHHhcccc-----Cccc
Confidence 334457899999999999999998632 34321 112444421 246889999999999987643210 1224
Q ss_pred cceeeeecccccccCCceEEEecccceecC-CCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhccccC----CCC-
Q 010456 173 ELGFTFSFPVKQTSVSSGILIKWTKGFAIE-SMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYH----DED- 246 (510)
Q Consensus 173 ~lGfTFSFPv~q~si~~g~Li~wtKgF~~~-~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~----~~~- 246 (510)
.+|+.++.|++ +|+++ ++- +.+ ++.+.|+.+.|++.+ ++|| .+.||+.+..++..+. +.+
T Consensus 77 ~igi~~pG~v~-----~g~v~-~~~--~l~~~w~~~~l~~~l~~~~---~~pV---~v~NDanaaalaE~~~g~~~~~~~ 142 (267)
T 1woq_A 77 PVGVTFPGIIQ-----HGVVH-SAA--NVDKSWLNTDIDALLTARL---GRPV---EVINDADAAGLAEARYGAGAGVKG 142 (267)
T ss_dssp CEEEEESSCEE-----TTEEC-CCT--TSCGGGTTCBHHHHHHHHH---TSCE---EEEEHHHHHHHHHHHHSTTTTCCS
T ss_pred eEEEEccceEc-----CCEEE-eCC--CCCCCCCCCCHHHHHHHHH---CCCE---EEeehhHHHHHHHHHhCCCCCCCC
Confidence 58888888896 46654 332 333 567889999999988 7886 8899999999998642 333
Q ss_pred ceEEEEeeCCcceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCccccccccCCCCCCccchhhhccccchH
Q 010456 247 TVAAVIIGTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMISGMYLG 326 (510)
Q Consensus 247 ~~iglIlGTGtNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLG 326 (510)
..+.+.+|||..++++.+..-+. + .|+|.. + +| |+ .+|..+|+..|-
T Consensus 143 ~~~~l~~GtGIG~giv~~G~l~~---G-----------gEiGh~-----~---v~---------~~--~lE~~~S~~~l~ 189 (267)
T 1woq_A 143 TVLVITLGTGIGSAFIFDGKLVP---N-----------AELGHL-----E---ID---------GH--DAETKASAVARE 189 (267)
T ss_dssp EEEEEEESSSEEEEEEETTEEET---T-----------CCGGGC-----E---ET---------TE--EHHHHHSHHHHH
T ss_pred cEEEEEECcceEEEEEECCEEcc---C-----------ceeeeE-----E---ec---------Cc--cHHHHhCHHHHh
Confidence 57899999999999997643211 1 266643 1 11 11 378888876431
Q ss_pred HHHHHHHHHhhhcCCCCCCCchhhccCCCCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 010456 327 DIVRRVILRMSEESDIFGPASSRLSMAFILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRR 406 (510)
Q Consensus 327 EivR~vl~~l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~R 406 (510)
+ . . . ..++
T Consensus 190 ~-----------~-----------------------------------------~------~--------------~~~~ 197 (267)
T 1woq_A 190 R-----------D-----------------------------------------G------L--------------SWDE 197 (267)
T ss_dssp H-----------T-----------------------------------------T------C--------------CHHH
T ss_pred h-----------c-----------------------------------------c------h--------------hHHH
Confidence 0 0 0 0 1245
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEE-EcC
Q 010456 407 AARLAAAGIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILK-VTE 485 (510)
Q Consensus 407 aA~L~Aa~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~-~s~ 485 (510)
+++..+.+|+.++..+++ -.|.+.|++....+.|.+.++ . ...|.+- +.+
T Consensus 198 ~~~~l~~~l~~l~~~ldP-------------------~~IvlgG~i~~~~~~~~~~~~--------~--~~~i~~s~l~~ 248 (267)
T 1woq_A 198 YSVLLQRYFSHVEFLFSP-------------------ELFIVGGGISKRADEYLPNLR--------L--RTPIVPAVLRN 248 (267)
T ss_dssp HHHHHHHHHHHHHHHHCC-------------------SEEEEESGGGGGGGGTGGGCC--------C--SSCEEECSCST
T ss_pred HHHHHHHHHHHHHHHcCC-------------------CEEEEeChhhcccHHHHHhhc--------c--CceEEECCcCC
Confidence 677788888888888876 257799999887777665543 1 1233332 447
Q ss_pred CcchHHHHHHHHHhc
Q 010456 486 DGSGIGAALLAASHS 500 (510)
Q Consensus 486 DgSgiGAAl~Aa~~~ 500 (510)
|...+|||.++....
T Consensus 249 ~a~~~GAa~l~~~~~ 263 (267)
T 1woq_A 249 EAGIVGAAIEIALQH 263 (267)
T ss_dssp THHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHhcc
Confidence 889999998875544
No 28
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=99.35 E-value=4e-11 Score=120.13 Aligned_cols=274 Identities=18% Similarity=0.198 Sum_probs=160.8
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceee
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFT 177 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfT 177 (510)
.+|+||+|||++|++++++.| +++.+. .++.|.. ...+.+++++.|++.+.++++.. ...+|+.
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g---~i~~~~--~~~~~~~-~~~~~~~~~~~i~~~i~~~~~~~----------~~~igi~ 66 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEG---NFIGEG--SSGPGNY-HNVGLTRAIENIKEAVKIAAKGE----------ADVVGMG 66 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTS---CEEEEE--EESCCCH-HHHCHHHHHHHHHHHHHHHHTSC----------CSEEEEE
T ss_pred EEEEEEeCCCcEEEEEEcCCC---CEEEEE--eCCCCCc-ccCCHHHHHHHHHHHHHHHHhcC----------CCEEEEE
Confidence 479999999999999998866 344332 2343321 11257889999999998887532 2357777
Q ss_pred eecccccccCCceEEEecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhccccCCCCceEEEEeeCCc
Q 010456 178 FSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGT 257 (510)
Q Consensus 178 FSFPv~q~si~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~~~~~~iglIlGTGt 257 (510)
++.| +.. ++. .++.+.|++ + ++|+ .+.||+.+..++... .+..+.+++|||.
T Consensus 67 ~~G~-~~~---~~~---------------~~l~~~l~~-~---~~pv---~v~ND~~aaa~~e~~--~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 67 VAGL-DSK---FDW---------------ENFTPLASL-I---APKV---IIQHDGVIALFAETL--GEPGVVVIAGTGS 118 (299)
T ss_dssp ETTC-CSH---HHH---------------HHHHHHHTT-S---SSEE---EEEEHHHHHHHHHHT--TSCEEEEEESSSE
T ss_pred cCCC-Cch---hHH---------------HHHHHHHHh-C---CCCE---EEeCcHHHHHhhccC--CCCeEEEEecCCE
Confidence 7777 531 121 244444443 3 4444 789999999998754 4668999999994
Q ss_pred ceeeEcccCccccccCCCCCCCcEEEeeccCCcCCCCCCCCccccccccCCC-CCCcc-------chhhhccccchHHHH
Q 010456 258 NACYLERTDAIIKCQGLLTTSGGMVVNMEWGNFWSSHLPRTSYDIDLDAESP-NPNDQ-------GFEKMISGMYLGDIV 329 (510)
Q Consensus 258 Na~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f~~~~lp~T~~D~~lD~~S~-nPG~q-------~fEKmiSG~YLGEiv 329 (510)
.+. . ++ .+..-.--|||..- .| ..+. .-|.+ .+|..+|+..|-+.+
T Consensus 119 ---i~~-g----~~------~G~~~~aGE~Gh~~--------~~----~g~~c~cG~~gl~~~~~~le~~~s~~~l~~~~ 172 (299)
T 2e2o_A 119 ---VVE-G----YN------GKEFLRVGGRGWLL--------SD----DGSAYWVGRKALRKVLKMMDGLENKTILYNKV 172 (299)
T ss_dssp ---EEE-E----EC------SSCEEEEECSCTTT--------CC----TTSHHHHHHHHHHHHHHHHTTSSCCCHHHHHH
T ss_pred ---EEE-E----Ec------CCeEEecCCcCCCc--------CC----CccHHHHHHHHHHHHHHHHhCCCCCCHHHHHH
Confidence 111 1 11 12445567888651 11 0000 00111 567777777775544
Q ss_pred HHHHHHhhhcCCCCCCCchhhccC-C--CCChhhhhhhccCCCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 010456 330 RRVILRMSEESDIFGPASSRLSMA-F--ILRTPLMAAMHEDDSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRR 406 (510)
Q Consensus 330 R~vl~~l~~~~~lF~~~p~~l~~~-~--~l~t~~ls~i~~d~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~R 406 (510)
+..+ .. .-+..+... + ..+...++ ...+.+.+..++ .+ ..|..+.++
T Consensus 173 ~~~~----~~-----~~~~~l~~~~~~~~~~~~~~~-------~~~~~v~~~a~~------gd--------~~a~~il~~ 222 (299)
T 2e2o_A 173 LKTI----NV-----KDLDELVMWSYTSSCQIDLVA-------SIAKAVDEAANE------GD--------TVAMDILKQ 222 (299)
T ss_dssp HHHT----TC-----CSHHHHHHHHHHHTTCHHHHH-------TTHHHHHHHHHT------TC--------HHHHHHHHH
T ss_pred HHHh----CC-----CCHHHHHHHHHcCCCCHHHHH-------HHHHHHHHHHhc------CC--------HHHHHHHHH
Confidence 4311 00 000000000 0 00000000 011112122221 22 668889999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCC
Q 010456 407 AARLAAAGIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTED 486 (510)
Q Consensus 407 aA~L~Aa~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~D 486 (510)
+++..|.+|+.++..+++ ..|.+.|++... +.|.+.+++.+++. .|..-..++
T Consensus 223 ~~~~La~~i~~l~~~l~p-------------------~~IvlgGgv~~~-~~~~~~l~~~~~~~-------~i~~~~~~~ 275 (299)
T 2e2o_A 223 GAELLASQAVYLARKIGT-------------------NKVYLKGGMFRS-NIYHKFFTLYLEKE-------GIISDLGKR 275 (299)
T ss_dssp HHHHHHHHHHHHHHHHTC-------------------SEEEEESGGGGS-HHHHHHHHHHHHHT-------TCEEECCSC
T ss_pred HHHHHHHHHHHHHHhcCC-------------------CEEEEECCccCc-HHHHHHHHHHCCCC-------eEeccCCCC
Confidence 999999999999999865 247789999988 99999999888764 232221348
Q ss_pred cchHHHHHHHHH
Q 010456 487 GSGIGAALLAAS 498 (510)
Q Consensus 487 gSgiGAAl~Aa~ 498 (510)
.+.+|||.++.-
T Consensus 276 ~~~~GAa~la~~ 287 (299)
T 2e2o_A 276 SPEIGAVILAYK 287 (299)
T ss_dssp CHHHHHHHHHHH
T ss_pred ChHHHHHHHHHH
Confidence 889999988743
No 29
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=99.31 E-value=3.3e-11 Score=120.76 Aligned_cols=125 Identities=16% Similarity=0.143 Sum_probs=78.5
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceeee
Q 010456 99 YYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTF 178 (510)
Q Consensus 99 ~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTF 178 (510)
+|+||+|||+.|+++++ .| .++.+.. .+ |.+....+.+++++.|.+.+.+.+... ..+...+|+..
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g---~il~~~~--~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~-------~~~i~~igig~ 67 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EG---KSLGRFQ--TS-GINPFQQDRNEIDTALRSEVLPAIGQK-------ASSIRAVYFYG 67 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TT---EEEEEEE--EE-CCCTTTSCHHHHHHHHTTTTHHHHTTS-------TTTCCEEEEEE
T ss_pred EEEEEeCccceEEEEEe-CC---eEEEEEE--CC-CCCcccCCHHHHHHHHHHHHHHHhCCC-------cccccEEEEEC
Confidence 79999999999999998 65 3444321 11 212212246778888888777654211 11233466666
Q ss_pred ecccccccCCceEEEecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhccccCCCCceEEEEeeCCcc
Q 010456 179 SFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGTGTN 258 (510)
Q Consensus 179 SFPv~q~si~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~~~~~~iglIlGTGtN 258 (510)
+.|+ . ..+ .++.+.|++.+ +.. ..+.|.||+.+.+++.. ..+..+.+|+|||.+
T Consensus 68 pG~~-~---~~~----------------~~l~~~l~~~~---~~~-~pv~v~NDa~~aa~ge~--g~~~~v~v~~GTGig 121 (291)
T 1zbs_A 68 AGCT-P---AKA----------------PMLNEALDSML---PHC-DRIEVAGDMLGAARALC--GDSEGIACILGTGSN 121 (291)
T ss_dssp TTCC-T---TTH----------------HHHHHHHHHHS---TTC-SEEEEECHHHHHHHHHT--TTSCEEEEEESSSEE
T ss_pred CCCC-h---HHH----------------HHHHHHHHHhc---CCC-CcEEEeCcHHHHHHhhc--CCCCcEEEEecCChh
Confidence 6554 1 111 25555555544 420 23589999999999873 456789999999998
Q ss_pred eeeEc
Q 010456 259 ACYLE 263 (510)
Q Consensus 259 a~Y~e 263 (510)
++.+.
T Consensus 122 g~~i~ 126 (291)
T 1zbs_A 122 SCLFD 126 (291)
T ss_dssp EEEEC
T ss_pred eEEEC
Confidence 66653
No 30
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=99.24 E-value=3.5e-12 Score=127.87 Aligned_cols=120 Identities=14% Similarity=0.158 Sum_probs=67.4
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCc-cccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceee
Q 010456 99 YYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPP-ELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFT 177 (510)
Q Consensus 99 ~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~-~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfT 177 (510)
||+||+|||++|+++++ .| .++.+. ..|. +....+.+++++.|.+.+.+.+... +...+|+.
T Consensus 2 ~lgiDiGGT~i~~~l~d-~g---~il~~~----~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~---------~i~~igig 64 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-NG---AVIKRL----GTKGINPFFQSEEEIQQKLTASLLPQLPEG---------KFNAVYFY 64 (291)
T ss_dssp --CEECCTTCEEEEEEC-SS---SEEEEE----EECCCCTTTSCSTTTTTTTTC----------------------CEEE
T ss_pred EEEEEeccccEEEEEEc-CC---eEEEEE----ECCCCCcccCCHHHHHHHHHHHHHHhcCcc---------cccEEEEE
Confidence 68999999999999998 65 344332 1222 1111134556666666665544211 12346666
Q ss_pred eecccccccCCceEEEecccceecCCCCCchHHHHHHHHHHhcC--CCceEEEEEechHHHHhccccCCCCceEEEEeeC
Q 010456 178 FSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRG--LDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGT 255 (510)
Q Consensus 178 FSFPv~q~si~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~--l~v~V~alvNDTVgTlla~ay~~~~~~iglIlGT 255 (510)
.+.|+ . .. +.++.+.|++.+ + .|+ .|.||+.+.+++.. ..+..+.+|+||
T Consensus 65 ~pG~~-~---~~----------------~~~l~~~l~~~~---~~~~pv---~v~NDa~~aalge~--g~~~~v~v~~GT 116 (291)
T 1zxo_A 65 GAGCT-P---EK----------------APVLRRAIADSL---PVIGNI---KANSDMLAAAHGLC--GQKAGIACILGT 116 (291)
T ss_dssp CTTCC-T---TT----------------THHHHHHHHHHS---CCCSCC---EEECSHHHHHHHTT--TTSCBEEEEESS
T ss_pred cCCCC-H---HH----------------HHHHHHHHHHhc---CCCceE---EEECcHHHHHHhhc--CCCCcEEEEeCC
Confidence 65554 1 11 125555555544 5 355 88999999999884 456679999999
Q ss_pred CcceeeEc
Q 010456 256 GTNACYLE 263 (510)
Q Consensus 256 GtNa~Y~e 263 (510)
|.+++.+.
T Consensus 117 Gi~g~gi~ 124 (291)
T 1zxo_A 117 GSNSCFYN 124 (291)
T ss_dssp SEEEEEEC
T ss_pred ChheEEEC
Confidence 99855543
No 31
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=99.22 E-value=7.9e-11 Score=122.83 Aligned_cols=289 Identities=13% Similarity=0.120 Sum_probs=162.4
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHH---HHHHHHHHhhcCCCCCCCCCccccc
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFI---ASALQQFVEKEGNGSEPPPIRRREL 174 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~I---A~~i~~fl~~~~~~~~~~~~~~l~l 174 (510)
.+|+||+|||++|+++++++ .++.+. .++.|..... +.+++++.+ .+.|.+++++.+.. ..+...+
T Consensus 3 ~vlgidiGgt~ik~al~d~~----~il~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~~~~----~~~i~gI 71 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE----RMVKMQ--NFSHSPDELG-RFQKILDQLEFREKIARQFVEETGYS----LSSFSAF 71 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT----EEEEEE--EEECCHHHHH-TCSSGGGGHHHHHHHHHHHHHTTTCC----GGGCSEE
T ss_pred eEEEEECCccceeEEEEecc----hheeee--ecccCccccc-chhhHHHHHHHHHHHHHHHHHHcCCC----ccCceEE
Confidence 47999999999999999852 344332 2333321100 123445555 77888888754321 1122334
Q ss_pred eeeeecccccccCCceEEEe-----------cccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechH---------
Q 010456 175 GFTFSFPVKQTSVSSGILIK-----------WTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTV--------- 234 (510)
Q Consensus 175 GfTFSFPv~q~si~~g~Li~-----------wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTV--------- 234 (510)
+.++.|++. .+|.+.. +++....+. .+.++.+.|++.+ ++|+ .+.||..
T Consensus 72 -i~~pG~vd~---~~G~~~~i~~~~~~~l~~~~~~~~~~n-l~~~l~~~l~~~~---~~Pv---~v~NDan~~~~~~~a~ 140 (381)
T 1saz_A 72 -VSRGGLLDP---IPGGVYLVDGLMIKTLKSGKNGEHASN-LGAIIAHRFSSET---GVPA---YVVDPVVVDEMEDVAR 140 (381)
T ss_dssp -EEECCSCSC---BCSSEEECCHHHHHHHHHTTTCCCTTH-HHHHHHHHHHHHH---CCCE---EEESCTTBCCCCGGGT
T ss_pred -EecCCCCCC---CCCceEecCHHHHHHHHhcccccChhh-hhHHHHHHHHHhc---CCCE---EEeCCCccccCcHHHH
Confidence 555666763 3454420 111011111 1456666666666 8886 6999998
Q ss_pred HHHh-----------------cc-cc----CCCC--ceEEEEeeCCcceeeEcccCccccccCCCCCCCcEEEeeccCCc
Q 010456 235 GTLA-----------------LG-HY----HDED--TVAAVIIGTGTNACYLERTDAIIKCQGLLTTSGGMVVNMEWGNF 290 (510)
Q Consensus 235 gTll-----------------a~-ay----~~~~--~~iglIlGTGtNa~Y~e~~~~I~k~~~~~~~~~~miIN~EwG~f 290 (510)
+..+ +. .+ .+.+ ..+.+.+|||..+|.+.+...+....+..++ +.|.+
T Consensus 141 aaalp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGiG~g~i~~G~~~~G~~g~agE-Gh~~~------- 212 (381)
T 1saz_A 141 VSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGISIAAHRKGRVIDVNNALDGD-GPFTP------- 212 (381)
T ss_dssp BCSSTTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSEEEEEEETTEEEEECCGGGTC-SSCCS-------
T ss_pred HcCCcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCcEEEEEECCEEEEecCCCCCC-cceee-------
Confidence 5555 44 21 2334 8899999999999999864433332222222 33222
Q ss_pred CCCCCCCCccccccccCCCCCC---ccchhhhccccchHHHHHHHHHHhhhcCCCCCCCchhhccCCCCChhhhhhhccC
Q 010456 291 WSSHLPRTSYDIDLDAESPNPN---DQGFEKMISGMYLGDIVRRVILRMSEESDIFGPASSRLSMAFILRTPLMAAMHED 367 (510)
Q Consensus 291 ~~~~lp~T~~D~~lD~~S~nPG---~q~fEKmiSG~YLGEivR~vl~~l~~~~~lF~~~p~~l~~~~~l~t~~ls~i~~d 367 (510)
++-.. -.+| .-.+|..+|+..|-+.++. ...+ .. ..
T Consensus 213 -------~~~g~------c~cg~l~~gc~e~~~S~~~l~~~~~~-------~~g~------------------~~-~~-- 251 (381)
T 1saz_A 213 -------ERSGT------LPLTQLVDLCFSGKFTYEEMKKRIVG-------NGGL------------------VA-YL-- 251 (381)
T ss_dssp -------SCCCS------CCHHHHHHHHTSSCCCTTGGGSTTTT-------SCTH------------------HH-HH--
T ss_pred -------ccCCC------CCCcHHHHHHHHhCCCHHHHHHHHHh-------ccCc------------------cc-cc--
Confidence 11000 1222 1244555565544221110 0000 00 00
Q ss_pred CCccHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCCCCCCCCCccccccceEE
Q 010456 368 DSPELTEVARILNDVLEIPDVPLKVRKLIVKICDVVTRRAARLAAAGIVGILKKI--GRDGSGGISSGRSRSDIRMRRTV 445 (510)
Q Consensus 368 ~s~~~~~~~~il~~~~~~~~~~~~d~~~v~~I~~~V~~RaA~L~Aa~iaaIl~~~--~~~~~~~~~~~~~~~~~~~~~~~ 445 (510)
...+.+.+.+..++ .+ ..|..+.+++++..|.+|+.++..+ ++ -.
T Consensus 252 ~~~~~~~i~~~a~~------gd--------~~a~~~l~~~~~~la~~i~~l~~~l~~~p-------------------~~ 298 (381)
T 1saz_A 252 GTSDAREVVRRIKQ------GD--------EWAKRVYRAMAYQIAKWIGKMAAVLKGEV-------------------DF 298 (381)
T ss_dssp SCCCHHHHHHHHHT------TC--------HHHHHHHHHHHHHHHHHHHHHHHHTTTCC-------------------SE
T ss_pred cCCCHHHHHHHHHc------CC--------HHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------------CE
Confidence 01233333333332 23 5677889999999999999999988 43 35
Q ss_pred EEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCC---cchHHHHHHH
Q 010456 446 VAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTED---GSGIGAALLA 496 (510)
Q Consensus 446 I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~D---gSgiGAAl~A 496 (510)
|.+.|++.+..+.|++.+++.++.+. .+.+..++. ...+|||.++
T Consensus 299 IvlgGgi~~~~~~l~~~i~~~l~~~~------~~~i~~~~~~~~a~~~GAa~l~ 346 (381)
T 1saz_A 299 IVLTGGLAHEKEFLVPWITKRVSFIA------PVLVFPGSNEEKALALSALRVL 346 (381)
T ss_dssp EEEEEGGGGCTTTHHHHHHHHHTTTS------CEEEEEBCCHHHHHHHHHHHHH
T ss_pred EEEeCcCccChHHHHHHHHHHHHhhc------CeEEEecCcchhHHHHHHHHHH
Confidence 77899999887779999999887753 356666655 4678888765
No 32
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=99.20 E-value=2.6e-10 Score=114.85 Aligned_cols=126 Identities=18% Similarity=0.104 Sum_probs=82.5
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCcc--ccce
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRR--RELG 175 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~--l~lG 175 (510)
.+|+||+|||++|++++++.|+ ++.+.. .+ |.... ...+++++.+++.|.+++++.+.. ..+. ..+|
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~---il~~~~--~~-~~~~~-~~~~~~~~~l~~~i~~~l~~~~~~----~~~i~~~~ig 80 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGT---PLAMAE--GG-ASALS-QGIAKSWQAVLSTLEAAFQQAGLP----AAPASACAIG 80 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCC---EEEEEE--ES-CCCGG-GCHHHHHHHHHHHHHHHHHHTTCC----CCCGGGEEEE
T ss_pred EEEEEEcCccceEEEEEcCCCC---EEEEEe--CC-CCCcc-cCHHHHHHHHHHHHHHHHHhcCCC----hhhhccceEE
Confidence 6899999999999999998663 443321 11 11111 247889999999999998765421 1122 4578
Q ss_pred eeeecccccccCCceEEEecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhccccCCCCceEEEEeeC
Q 010456 176 FTFSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGT 255 (510)
Q Consensus 176 fTFSFPv~q~si~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~~~~~~iglIlGT 255 (510)
+..+.|++... |. + |+..+.+ ++| +.|.||+.+.+++. +. .+..+.+++||
T Consensus 81 ig~pG~v~~~~--------~~-----------~----l~~~~~~-~~p---v~v~NDa~aaa~ge-~~-~~~~v~v~~GT 131 (305)
T 1zc6_A 81 LGLSGVHNRQW--------AG-----------E----FESQAPG-FAR---LSLATDGYTTLLGA-HG-GQPGIIVALGT 131 (305)
T ss_dssp EEESCCCTTSH--------HH-----------H----HHHTCCC-CSE---EEEECHHHHHHHHH-TT-TSSEEEEEESS
T ss_pred EEecCCCchHH--------HH-----------H----HHHhCCC-Cce---EEEECCHHHHHHhh-cC-CCCeEEEEecC
Confidence 88888887532 31 1 3322110 334 48999999998886 33 35678899999
Q ss_pred CcceeeEc
Q 010456 256 GTNACYLE 263 (510)
Q Consensus 256 GtNa~Y~e 263 (510)
|+.++.+.
T Consensus 132 Gigg~~i~ 139 (305)
T 1zc6_A 132 GSIGEALY 139 (305)
T ss_dssp SEEEEEEC
T ss_pred CeEEEEEe
Confidence 99655443
No 33
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=98.98 E-value=7.6e-10 Score=107.52 Aligned_cols=126 Identities=17% Similarity=0.213 Sum_probs=83.1
Q ss_pred cceeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccc
Q 010456 95 EKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRREL 174 (510)
Q Consensus 95 E~G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~l 174 (510)
+.+.++++|+|||++|+ +.+.+. +.. +.+.|. ..+.+++.+.|++ ++++. +...+
T Consensus 4 ~~~~~lgiDIGGT~i~~--~d~~g~---~~~----~~~t~~---~~~~~~~~~~i~~----~i~~~---------~i~gi 58 (226)
T 3lm2_A 4 EDQTVLAIDIGGSHVKI--GLSTDG---EER----KVESGK---TMTGPEMVAAVTA----MAKDM---------TYDVI 58 (226)
T ss_dssp GGCCEEEEEECSSEEEE--EETTTC---CEE----EEECCT---TCCHHHHHHHHHH----HTTTC---------CCSEE
T ss_pred cCCEEEEEEECCCEEEE--EECCCC---EEE----EEECCC---CCCHHHHHHHHHH----HHHhC---------CCCEE
Confidence 35689999999999994 454442 211 233333 2245566665554 44322 24668
Q ss_pred eeeeecccccccCCceEEEecccceec-CCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhccccCCCCceEEEEe
Q 010456 175 GFTFSFPVKQTSVSSGILIKWTKGFAI-ESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDEDTVAAVII 253 (510)
Q Consensus 175 GfTFSFPv~q~si~~g~Li~wtKgF~~-~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~~~~~~iglIl 253 (510)
|+.++.|++. ++.+ ..+- ++ +++.+.|+. +.+ ++|+ .+.||..+..++..+. ...+.+.+
T Consensus 59 gi~~pG~Vd~----~~~~-~~~~--nl~~~w~~~~l~----~~~---~~pv---~v~NDanaaalge~~~--~~~~~l~~ 119 (226)
T 3lm2_A 59 AMGYPGPVVH----NKPL-REPV--NLGEGWVGYDYE----GAF---GRPV---RIVNDALMQAIGSYNG--GRMLFLGL 119 (226)
T ss_dssp EEEESSCEET----TEEC-SCCT--TSCSCCTTCCHH----HHH---TSCE---EEEEHHHHHHHHHCCS--SEEEEEEE
T ss_pred EEEEEeEEEC----CeEE-EECC--cCCccccCCchH----Hhc---CCeE---EEEEHHHHHHHHHhhc--CcEEEEEe
Confidence 8999999984 3333 2221 33 356677763 333 7776 8899999999988654 57899999
Q ss_pred eCCcceeeEcc
Q 010456 254 GTGTNACYLER 264 (510)
Q Consensus 254 GTGtNa~Y~e~ 264 (510)
|||..++.+.+
T Consensus 120 GtGiG~gii~~ 130 (226)
T 3lm2_A 120 GTGLGAAMIVE 130 (226)
T ss_dssp SSSEEEEEEET
T ss_pred CCceEEEEEEC
Confidence 99999999874
No 34
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=96.21 E-value=0.018 Score=61.78 Aligned_cols=84 Identities=15% Similarity=0.233 Sum_probs=53.9
Q ss_pred cceeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecC--C-ccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCcc
Q 010456 95 EKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI--P-PELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRR 171 (510)
Q Consensus 95 E~G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~I--p-~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~ 171 (510)
+...+|+||+|+|+.|+++++..| .++...+..++. | +....-+.+++++.+.+++.+.+++.+.. ..+.
T Consensus 5 ~~~~~lgIDiGtts~k~~l~d~~G---~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~----~~~I 77 (508)
T 3ifr_A 5 QGRQVIGLDIGTTSTIAILVRLPD---TVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGES----DWRP 77 (508)
T ss_dssp --CEEEEEEECSSEEEEEEEETTT---EEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGG----GCCE
T ss_pred cCCEEEEEEecCcceEEEEECCCC---CEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcCCC----hhhe
Confidence 345799999999999999998655 355444333332 1 11223468899999999999998764321 1234
Q ss_pred ccceeeeec----ccccc
Q 010456 172 RELGFTFSF----PVKQT 185 (510)
Q Consensus 172 l~lGfTFSF----Pv~q~ 185 (510)
..||++-.- |++..
T Consensus 78 ~~Igis~~~~~~v~~D~~ 95 (508)
T 3ifr_A 78 GGICVTGMLPAVVLLDDR 95 (508)
T ss_dssp EEEEEEECSSCBEEECTT
T ss_pred EEEEEECCCCcEEEECCC
Confidence 556666555 66653
No 35
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.85 E-value=0.029 Score=60.33 Aligned_cols=79 Identities=18% Similarity=0.225 Sum_probs=51.9
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeec--CCc-cccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccc
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQP--IPP-ELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRREL 174 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~--Ip~-~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~l 174 (510)
.+|+||+|+|+.|+++++..|+ ++...+..++ .|+ ....-+.+++++.+.++|.+.+++.+.. ..+...|
T Consensus 27 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~----~~~I~~I 99 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGNQK---IAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGIT----ANDIAAI 99 (520)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCC----GGGEEEE
T ss_pred eEEEEEeCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCC----cccEEEE
Confidence 6899999999999999987663 4444333332 121 1233468899999999999998764321 1234456
Q ss_pred eeeeec----ccc
Q 010456 175 GFTFSF----PVK 183 (510)
Q Consensus 175 GfTFSF----Pv~ 183 (510)
|++-.- |++
T Consensus 100 gis~~g~~~v~~D 112 (520)
T 4e1j_A 100 GITNQRETVVVWD 112 (520)
T ss_dssp EEEECSSCEEEEE
T ss_pred EEeCCcceEEEEE
Confidence 666544 566
No 36
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.66 E-value=0.041 Score=58.98 Aligned_cols=64 Identities=22% Similarity=0.269 Sum_probs=44.9
Q ss_pred cceeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeec--CCc-cccccChhHHHHHHHHHHHHHHhhcC
Q 010456 95 EKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQP--IPP-ELMTGTSEDLFDFIASALQQFVEKEG 161 (510)
Q Consensus 95 E~G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~--Ip~-~~~~~~~~~lFd~IA~~i~~fl~~~~ 161 (510)
|+..+|+||+|+|+.|+++++..|+ ++...+..++ .|+ ....-+.+++++.+.+++.+.+++.+
T Consensus 1 ~~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~ 67 (510)
T 2p3r_A 1 EKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKAD 67 (510)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEEcCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 4557999999999999999987653 4443332232 121 12233688999999999999987653
No 37
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.40 E-value=0.063 Score=57.00 Aligned_cols=78 Identities=15% Similarity=0.321 Sum_probs=50.5
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecC--Cc-cccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccce
Q 010456 99 YYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI--PP-ELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELG 175 (510)
Q Consensus 99 ~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~I--p~-~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lG 175 (510)
||+||+|||+.|+++++..| .++...+..+++ |+ ....-+.+++++.+.++|.+.+++... .+...+|
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g---~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~------~~i~~Ig 72 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQG---EVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSL------QDVKALG 72 (484)
T ss_dssp EEEEEECSSEEEEEEECTTS---CEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSCC------TTCCEEE
T ss_pred EEEEEecCcccEEEEECCCC---CEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhCCc------cceEEEE
Confidence 79999999999999997655 344443322321 21 122335789999999999998875321 2245566
Q ss_pred eeeec----ccccc
Q 010456 176 FTFSF----PVKQT 185 (510)
Q Consensus 176 fTFSF----Pv~q~ 185 (510)
++..- |++..
T Consensus 73 is~~~~~~v~~D~~ 86 (484)
T 2itm_A 73 IAGQMHGATLLDAQ 86 (484)
T ss_dssp EEECSSCBEEECTT
T ss_pred EcCCcCcEEEECCC
Confidence 66655 66653
No 38
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.38 E-value=0.056 Score=57.74 Aligned_cols=61 Identities=11% Similarity=0.266 Sum_probs=43.3
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecC--C-ccccccChhHHHHHHHHHHHHHHhhcC
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI--P-PELMTGTSEDLFDFIASALQQFVEKEG 161 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~I--p-~~~~~~~~~~lFd~IA~~i~~fl~~~~ 161 (510)
.+|+||+|+|+.|+++++..|+ ++...+..++. | +....-+.+++++.+.++|.+.+++.+
T Consensus 7 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~ 70 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQKGE---IAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINEND 70 (501)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEEeCccceEEEEEcCCCC---EEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 6899999999999999987663 44443333321 2 112234678999999999999987643
No 39
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.17 E-value=0.076 Score=56.55 Aligned_cols=80 Identities=18% Similarity=0.212 Sum_probs=51.4
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeec--CCc-cccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccc
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQP--IPP-ELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRREL 174 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~--Ip~-~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~l 174 (510)
.+|+||+|||+.|+++++..| .++......++ .|+ .....+.+++++.+.++|.+.+++.+.. ..+...+
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g---~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~----~~~i~~I 75 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEG---RPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAE----AGEVLAL 75 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTS---CEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCC----GGGCCEE
T ss_pred EEEEEeeCCcceEEEEECCCC---CEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCC----cccEEEE
Confidence 589999999999999998755 34443332232 121 1223367899999999999998764321 1234456
Q ss_pred eeeee----ccccc
Q 010456 175 GFTFS----FPVKQ 184 (510)
Q Consensus 175 GfTFS----FPv~q 184 (510)
|++.. .|++.
T Consensus 76 gis~~~~~~~~vD~ 89 (495)
T 2dpn_A 76 GITNQRETTLLWDR 89 (495)
T ss_dssp EEEECSSCBEEEET
T ss_pred EEeCCCccEEEEEC
Confidence 66655 46664
No 40
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=94.99 E-value=0.092 Score=55.95 Aligned_cols=61 Identities=18% Similarity=0.249 Sum_probs=42.6
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecC--Cc-cccccChhHHHHHHHHHHHHHHhhcC
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI--PP-ELMTGTSEDLFDFIASALQQFVEKEG 161 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~I--p~-~~~~~~~~~lFd~IA~~i~~fl~~~~ 161 (510)
.+|+||+|||+.|+++++..| .++......++. |+ ....-+.+++++.+.++|.+.+++.+
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g---~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~ 67 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRES---NIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSAR 67 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTC---CEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCchhEEEEECCCC---CEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 689999999999999997655 344443333321 21 11223578999999999999987653
No 41
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=94.95 E-value=0.11 Score=55.52 Aligned_cols=62 Identities=18% Similarity=0.339 Sum_probs=44.1
Q ss_pred eeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeec--CC-ccccccChhHHHHHHHHHHHHHHhhcC
Q 010456 97 GIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQP--IP-PELMTGTSEDLFDFIASALQQFVEKEG 161 (510)
Q Consensus 97 G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~--Ip-~~~~~~~~~~lFd~IA~~i~~fl~~~~ 161 (510)
..+|+||+|+|+.|+++++..|+ ++...+..++ .| +....-+.+++++.+.++|.+.+++.+
T Consensus 5 ~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~ 69 (506)
T 3h3n_X 5 NYVMAIDQGTTSSRAIIFDRNGK---KIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESG 69 (506)
T ss_dssp CEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEEcCCCceEEEEECCCCC---EEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 37899999999999999997663 4443333332 12 122234688999999999999987654
No 42
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.89 E-value=0.1 Score=55.72 Aligned_cols=80 Identities=8% Similarity=0.032 Sum_probs=51.6
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecC--Cc-cccccChhHHHHHHHHHHHHHHhhc--CCCCCCCCCccc
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI--PP-ELMTGTSEDLFDFIASALQQFVEKE--GNGSEPPPIRRR 172 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~I--p~-~~~~~~~~~lFd~IA~~i~~fl~~~--~~~~~~~~~~~l 172 (510)
.+|+||+|||+.|+++++..|+ ++......++. |+ .....+.+++++.+.++|.+.+++. +.. ..+..
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~----~~~i~ 77 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEELN---IVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYT----SVIIK 77 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSS----SCEEE
T ss_pred EEEEEEeCCcceEEEEECCCCC---EEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCC----ccceE
Confidence 5899999999999999987653 44443333321 21 1122357899999999999988763 211 12345
Q ss_pred cceeeee----ccccc
Q 010456 173 ELGFTFS----FPVKQ 184 (510)
Q Consensus 173 ~lGfTFS----FPv~q 184 (510)
.+|++.. .|++.
T Consensus 78 ~Igis~~~~~~~~~D~ 93 (503)
T 2w40_A 78 CIGITNQRETVIIWDR 93 (503)
T ss_dssp EEEEEECSSCEEEEET
T ss_pred EEEEcCCcceEEEEEC
Confidence 5666665 46764
No 43
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.87 E-value=0.051 Score=58.47 Aligned_cols=77 Identities=22% Similarity=0.285 Sum_probs=50.4
Q ss_pred ccceeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecC--C-ccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCc
Q 010456 94 SEKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI--P-PELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIR 170 (510)
Q Consensus 94 ~E~G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~I--p-~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~ 170 (510)
+|+-+||+||+|.|+.|+++++..|+ ++...+.+++. | +....-+++++++-+.++|.+.+++.+.. +.+
T Consensus 1 tekkYvlgID~GTss~Ka~l~d~~G~---~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~----~~~ 73 (526)
T 3ezw_A 1 TEKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADIS----SDQ 73 (526)
T ss_dssp --CCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCC----GGG
T ss_pred CCceEEEEEEccccceeeeEEcCCCC---EEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCC----hhh
Confidence 46778999999999999999976553 44433333321 2 12233468899999999999998876532 233
Q ss_pred cccceee
Q 010456 171 RRELGFT 177 (510)
Q Consensus 171 ~l~lGfT 177 (510)
...||+|
T Consensus 74 I~aIgis 80 (526)
T 3ezw_A 74 IAAIGIT 80 (526)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 4455654
No 44
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=94.42 E-value=0.092 Score=56.10 Aligned_cols=80 Identities=15% Similarity=0.171 Sum_probs=51.3
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecC--Cc-cccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccc
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI--PP-ELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRREL 174 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~I--p~-~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~l 174 (510)
.+|+||+|+|+.|+++++..|+ ++......++. |+ .....+.+++++.+.++|.+.+++.+.. ..+...+
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~----~~~i~~I 75 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGE---IYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLT----HEDIAAV 75 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCC----GGGEEEE
T ss_pred EEEEEecCCcceEEEEECCCCC---EEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCC----cccEEEE
Confidence 5899999999999999987653 44443323321 11 1122357899999999999998764321 1234456
Q ss_pred eeeeec----cccc
Q 010456 175 GFTFSF----PVKQ 184 (510)
Q Consensus 175 GfTFSF----Pv~q 184 (510)
|++..- |++.
T Consensus 76 gis~~g~~~v~vD~ 89 (504)
T 2d4w_A 76 GITNQRETAVVWDK 89 (504)
T ss_dssp EEEECSSCBEEEET
T ss_pred EEeCCCCeEEEEEC
Confidence 666553 5664
No 45
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=94.27 E-value=0.18 Score=54.02 Aligned_cols=57 Identities=11% Similarity=0.128 Sum_probs=41.1
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecC--C-ccccccChhHHHHHHHHHHHHHH
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI--P-PELMTGTSEDLFDFIASALQQFV 157 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~I--p-~~~~~~~~~~lFd~IA~~i~~fl 157 (510)
.+|+||+|+|+.|+++++..| .++...+..+++ | +....-+.+++++.+.+++.+.+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G---~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~ 65 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRDG---GLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW 65 (511)
T ss_dssp EEEEEEECSSEEEEEEECTTS---CEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCceEEEEECCCC---CEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 689999999999999998765 344443333321 2 22233468899999999999988
No 46
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=94.10 E-value=0.079 Score=57.34 Aligned_cols=62 Identities=16% Similarity=0.389 Sum_probs=44.0
Q ss_pred eeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecC--C-ccccccChhHHHHHHHHHHHHHHhhcC
Q 010456 97 GIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI--P-PELMTGTSEDLFDFIASALQQFVEKEG 161 (510)
Q Consensus 97 G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~I--p-~~~~~~~~~~lFd~IA~~i~~fl~~~~ 161 (510)
..+|+||+|+|+.|+++++..| .++...+..+++ | +....-+.+++++.+.++|.+.+++.+
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~G---~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~ 69 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFDLQG---RMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQAD 69 (554)
T ss_dssp CEEEEEEECSSEEEEEEEETTS---CEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHT
T ss_pred cEEEEEEECcccEEEEEECCCC---CEEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcC
Confidence 3789999999999999998765 344443333321 1 222334688999999999999987654
No 47
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=94.04 E-value=0.11 Score=55.43 Aligned_cols=60 Identities=15% Similarity=0.240 Sum_probs=42.9
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecC--C-ccccccChhHHHHHHHHHHHHHHhhc
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI--P-PELMTGTSEDLFDFIASALQQFVEKE 160 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~I--p-~~~~~~~~~~lFd~IA~~i~~fl~~~ 160 (510)
.+|+||+|+|+.|+++++..| .++...+..++. | +....-+.+++++.+.++|.+.+++.
T Consensus 5 ~~lgIDiGtts~K~~l~d~~G---~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~ 67 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDING---KAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKI 67 (504)
T ss_dssp EEEEEEECSSEEEEEEEETTS---CEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEecCCceEEEEEcCCC---CEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhC
Confidence 689999999999999998765 344444333331 1 22223468899999999999988753
No 48
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=93.85 E-value=0.1 Score=56.74 Aligned_cols=61 Identities=18% Similarity=0.329 Sum_probs=42.9
Q ss_pred eEEEEEeCCceeEEEEEEE-cCCcceeeeeeeeeec-------CC-------ccccccChhHHHHHHHHHHHHHHhhcC
Q 010456 98 IYYALDLGGTNFRVLRVQL-GGQRSSILSSDVERQP-------IP-------PELMTGTSEDLFDFIASALQQFVEKEG 161 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l-~g~~~~i~~~~~~~~~-------Ip-------~~~~~~~~~~lFd~IA~~i~~fl~~~~ 161 (510)
.+|+||+|+|+.|+++++. .| +++.+....++ .| +....-+.+++++-+.++|.+.+++.+
T Consensus 6 ~~lgIDiGTts~Ka~l~d~~~G---~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~~~ 81 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDLSNG---QELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKESG 81 (572)
T ss_dssp EEEEEEECSSEEEEEEEETTTC---CEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC--
T ss_pred EEEEEecCCcceEEEEEECCCC---eEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 6899999999999999987 66 34444443343 12 222333578899999999999987653
No 49
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=93.01 E-value=0.48 Score=50.14 Aligned_cols=84 Identities=19% Similarity=0.195 Sum_probs=51.5
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeee-----ecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccc
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVER-----QPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRR 172 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~-----~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l 172 (510)
.||+||+|+|+.|+++++..|+........... .+-|.. ..-..+++++.+.+.+.+..... .+..
T Consensus 5 ~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~~~~~~~g~-~e~d~~~~~~~i~~~~~~~~~~~--------~~i~ 75 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGY-VTWDVDSLESAIRLGLNKVCAAG--------IAID 75 (489)
T ss_dssp EEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEECCCEEETTE-EECCHHHHHHHHHHHHHHHHHTT--------CCCC
T ss_pred eEEEEEecCCCceEEEEEecCccceEEEEEEeecCCCccccCCe-EEECHHHHHHHHHHHHHHHHhCC--------CCce
Confidence 589999999999999998866421111111000 111111 12257789999999988876421 1346
Q ss_pred cceeee----ecccccccCCceEEEe
Q 010456 173 ELGFTF----SFPVKQTSVSSGILIK 194 (510)
Q Consensus 173 ~lGfTF----SFPv~q~si~~g~Li~ 194 (510)
.||++- ..|++. +|+.++
T Consensus 76 ~Igis~q~~~~v~~D~----~G~~l~ 97 (489)
T 2uyt_A 76 SIGIDTWGVDFVLLDQ----QGQRVG 97 (489)
T ss_dssp EEEEEECSSCEEEECT----TSCEES
T ss_pred EEEEecCcccEEEECC----CCCCcc
Confidence 688887 777875 355543
No 50
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=91.80 E-value=0.19 Score=53.45 Aligned_cols=57 Identities=19% Similarity=0.214 Sum_probs=39.1
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecC-C-ccccccChhHHHHHHHHHHHHHH
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPI-P-PELMTGTSEDLFDFIASALQQFV 157 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~I-p-~~~~~~~~~~lFd~IA~~i~~fl 157 (510)
.||+||+|+|+.|+++++..| +++...+.++++ | +....-+.+++++.+.++|.+.+
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~G---~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~ 65 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLDG---RMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA 65 (482)
T ss_dssp -CEEEEECSSEEEEEEECTTS---CEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT
T ss_pred eEEEEEcCCCCeEEEEEECCC---cEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH
Confidence 689999999999999997544 344443333332 1 11223368899999999999876
No 51
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=90.46 E-value=0.9 Score=48.64 Aligned_cols=53 Identities=11% Similarity=0.095 Sum_probs=37.3
Q ss_pred eeEEEEEeCCceeEEEEEE-EcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHH
Q 010456 97 GIYYALDLGGTNFRVLRVQ-LGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQ 155 (510)
Q Consensus 97 G~~LalDlGGTN~RV~~V~-l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~ 155 (510)
..+|+||+|+|+.|+++++ ..| +++...+ .+.|... .-+.+++++.+.+.+++
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~~G---~i~~~~~--~~~~g~~-e~d~~~~~~~i~~~l~~ 58 (515)
T 3i8b_A 5 TLVAGVDTSTQSCKVRVTDAETG---ELVRFGQ--AKHPNGT-SVDPSYWWSAFQEAAEQ 58 (515)
T ss_dssp CEEEEEEECSSEEEEEEEETTTC---CEEEEEE--EECCSSS-EECTHHHHHHHHHHHHH
T ss_pred cEEEEEEeccccEEEEEEECCCC---eEEEEEE--EeCCCCc-eECHHHHHHHHHHHHHh
Confidence 3689999999999999998 455 3554433 3334322 33678899988887765
No 52
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=88.36 E-value=0.62 Score=45.16 Aligned_cols=171 Identities=15% Similarity=0.101 Sum_probs=85.5
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceee
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFT 177 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfT 177 (510)
-+|+||+|+||+++++++ ++ ++... +++|... ..+.+++..++.+.+.. .. ...-|..
T Consensus 4 M~L~IDIGNT~ik~gl~~--~~--~l~~~----~r~~T~~-~~t~de~~~~l~~l~~~----~~---------~~i~~i~ 61 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE--DG--KTFRR----WRLSTGV-FQTEDELFSHLHPLLGD----AM---------REIKGIG 61 (249)
T ss_dssp EEEEEEECSSEEEEEEES--SS--SSCEE----EEEECCT-TCCHHHHHHHHHHHHGG----GG---------GGEEEEE
T ss_pred eEEEEEECCCeEEEEEEE--CC--EEEEE----EEecCCC-CCCHHHHHHHHHHHHhh----cc---------ccCCEEE
Confidence 379999999999999985 22 23332 4555433 23567777666543221 10 0001122
Q ss_pred eecccccccCCceEEEecccceecCCCCCchHHHHHHHHHHhc-CCCceEE---------EEEe------chHHHHhccc
Q 010456 178 FSFPVKQTSVSSGILIKWTKGFAIESMVGQEVTESLQRALDKR-GLDMRVA---------ALVN------DTVGTLALGH 241 (510)
Q Consensus 178 FSFPv~q~si~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~-~l~v~V~---------alvN------DTVgTlla~a 241 (510)
.|=| +-.+...+++++++. +++..++ ..-| |-.+.+++..
T Consensus 62 IsSV------------------------vp~~~~~~~~~~~~~~~~~p~~v~~~~~gl~~~y~~P~~lG~DR~~~~~aa~ 117 (249)
T 3bex_A 62 VASV------------------------VPTQNTVIERFSQKYFHISPIWVKAKNGCVKWNVKNPSEVGADRVANVVAFV 117 (249)
T ss_dssp EEES------------------------CHHHHHHHHHHHHHHHSCCCEECCCCSSSSEECSSCGGGSCHHHHHHHHHHH
T ss_pred EEcC------------------------cHHHHHHHHHHHHHhcCCCeEEEEccCCCceeccCChhhcCHHHHHHHHHHH
Confidence 2211 234455556555542 4322111 1122 4444455443
Q ss_pred cCCCCceEEEEeeCCcceeeEcccCcccc--ccCCCCCCCcEEEeeccCCc--CCCCCCCCccccccccCCCCCCccchh
Q 010456 242 YHDEDTVAAVIIGTGTNACYLERTDAIIK--CQGLLTTSGGMVVNMEWGNF--WSSHLPRTSYDIDLDAESPNPNDQGFE 317 (510)
Q Consensus 242 y~~~~~~iglIlGTGtNa~Y~e~~~~I~k--~~~~~~~~~~miIN~EwG~f--~~~~lp~T~~D~~lD~~S~nPG~q~fE 317 (510)
.......+-+=+||.+..+++.+..-+.. .+| +++=.-++ ....||+-+.+ ......|...-|
T Consensus 118 ~~~~~~~iVvD~GTA~T~d~v~~g~~lGG~I~PG---------i~l~~~aL~~~ta~Lp~v~~~----~~~~~~g~nT~~ 184 (249)
T 3bex_A 118 KEYGKNGIIIDMGTATTVDLVVNGSYEGGAILPG---------FFMMVHSLFRGTAKLPLVEVK----PADFVVGKDTEE 184 (249)
T ss_dssp HHTCSCEEEEEESSEEEEEEEETTEEEEEEEEEC---------HHHHHHHHHHTCSSCCCCCCC----CCCSSSBSSHHH
T ss_pred HHcCCCEEEEEcCCceEEEEEeCCeEeeEEECcc---------HHHHHHHHHHhhhcCCCCccc----CCCCCCCCCHHH
Confidence 22245667788999999999932211111 001 00000000 01246654333 223457889999
Q ss_pred hhccccchHH
Q 010456 318 KMISGMYLGD 327 (510)
Q Consensus 318 KmiSG~YLGE 327 (510)
-|-||.+.|-
T Consensus 185 ai~sGi~~g~ 194 (249)
T 3bex_A 185 NIRLGVVNGS 194 (249)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987664
No 53
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=84.48 E-value=21 Score=33.75 Aligned_cols=29 Identities=17% Similarity=0.258 Sum_probs=20.9
Q ss_pred HHHHHHHhcCCCceEEEEEechHHHHhcccc
Q 010456 212 SLQRALDKRGLDMRVAALVNDTVGTLALGHY 242 (510)
Q Consensus 212 lL~~al~r~~l~v~V~alvNDTVgTlla~ay 242 (510)
.+++++++.|++ +..++++..|.+.+...
T Consensus 110 ~~~~~~~~~g~~--~~~i~~e~~A~a~~~~~ 138 (272)
T 3h1q_A 110 ACGHVVAGAGLE--LVTLVDEPVAAARALGI 138 (272)
T ss_dssp HHHHHHHHTTCE--EEEEECHHHHHHHHHTC
T ss_pred HHHHHHHHcCCe--eeecccHHHHHHHHHcC
Confidence 466777766765 46789999999876543
No 54
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=82.60 E-value=1.6 Score=42.85 Aligned_cols=49 Identities=16% Similarity=0.211 Sum_probs=31.6
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHHhhc
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFVEKE 160 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl~~~ 160 (510)
-+|+||+|+||+++++++ ++ .+... +++|.. ..+.+++. ..+.++++..
T Consensus 3 MlL~IDIGNT~iK~gl~d--~~--~l~~~----~r~~T~--~~t~de~~----~~l~~ll~~~ 51 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFD--GD--EIKLR----FRHTSK--VSTSDELG----IFLKSVLREN 51 (266)
T ss_dssp CEEEEEECSSEEEEEEEE--TT--EEEEE----EEEECS--CCCHHHHH----HHHHHHHHTT
T ss_pred eEEEEEECCCeEEEEEEE--CC--EEEEE----EEecCC--CCCHHHHH----HHHHHHHHHc
Confidence 379999999999999985 21 34433 666665 23566654 4455555543
No 55
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=80.18 E-value=10 Score=36.32 Aligned_cols=47 Identities=19% Similarity=0.352 Sum_probs=28.9
Q ss_pred EEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEE-EEcCCcchHHHHHHHHHhcc
Q 010456 446 VAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVIL-KVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 446 I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l-~~s~DgSgiGAAl~Aa~~~~ 501 (510)
|.+.||+ -.+|.+++.+++.+ +. ++.+ ....+-..+|||+.|.-..+
T Consensus 210 vvl~GGv-a~n~~lr~~l~~~~----g~----~~~~p~~p~~~~A~GAAl~A~~~~~ 257 (276)
T 4ehu_A 210 VVMVGGV-ARNSGIVRAMAREI----NT----EIIVPDIPQLTGALGAALYAFDEAK 257 (276)
T ss_dssp EEEESGG-GGCHHHHHHHHHHH----TS----CEECCSSGGGHHHHHHHHHHHHHHH
T ss_pred EEEecCc-cchHHHHHHHHHHH----CC----CeeeCCCcchHHHHHHHHHHHHHHh
Confidence 4567776 46788888877654 32 2221 23456667899998864443
No 56
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=77.74 E-value=17 Score=36.93 Aligned_cols=33 Identities=15% Similarity=0.141 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcCCCceEEEEEechHHHHhccccC
Q 010456 209 VTESLQRALDKRGLDMRVAALVNDTVGTLALGHYH 243 (510)
Q Consensus 209 v~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~ 243 (510)
-.+.+++|.++.|+ +++.++|+.+|+.++....
T Consensus 165 ~r~~~~~a~~~AGl--~~~~li~Ep~AAa~~~~~~ 197 (409)
T 4gni_A 165 QKAALIAAAAAADL--EVLQLISEPAAAVLAYDAR 197 (409)
T ss_dssp HHHHHHHHHHHTTC--EEEEEEEHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHcCC--CeEEEEcCHHHHHHHHhcc
Confidence 35678888888887 5578999999998877653
No 57
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=76.86 E-value=18 Score=36.52 Aligned_cols=32 Identities=16% Similarity=0.150 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhcCCCceEEEEEechHHHHhcccc
Q 010456 209 VTESLQRALDKRGLDMRVAALVNDTVGTLALGHY 242 (510)
Q Consensus 209 v~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay 242 (510)
-.+.+++|.++.|+ +++.++|+.+|+.++...
T Consensus 173 ~r~~~~~a~~~AGl--~~~~li~Ep~AAa~~~~~ 204 (404)
T 3i33_A 173 QRQATKDAGTITGL--NVLRIINEPTAAAIAYGL 204 (404)
T ss_dssp HHHHHHHHHHHHTC--EEEEEEEHHHHHHHHTTT
T ss_pred HHHHHHHHHHHcCC--CeEEEeccHHHHHHHHHh
Confidence 35677888877787 457899999999987654
No 58
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=76.05 E-value=15 Score=36.74 Aligned_cols=32 Identities=19% Similarity=0.149 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhcCCCceEEEEEechHHHHhcccc
Q 010456 209 VTESLQRALDKRGLDMRVAALVNDTVGTLALGHY 242 (510)
Q Consensus 209 v~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay 242 (510)
-.+.+.+|.++.|+ +++.++|+.+|+.++...
T Consensus 168 ~r~~~~~a~~~aGl--~~~~li~Ep~Aaa~~~~~ 199 (394)
T 3qfu_A 168 QRQATKDAGTIAGL--NVLRIVNEPTAAAIAYGL 199 (394)
T ss_dssp HHHHHHHHHHHTTC--EEEEEEEHHHHHHHHTTT
T ss_pred HHHHHHHHHHHcCC--ceEEEecCHHHHHHHHhh
Confidence 35677788877777 457899999999987643
No 59
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=72.56 E-value=6.1 Score=38.55 Aligned_cols=44 Identities=14% Similarity=0.166 Sum_probs=28.2
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHH
Q 010456 99 YYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIAS 151 (510)
Q Consensus 99 ~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~ 151 (510)
+|+||+|.||+++++++ ++ .+... ++++.... .+.+++..++.+
T Consensus 2 lL~IDIGNT~ik~gl~~--~~--~l~~~----~r~~T~~~-~t~de~~~~l~~ 45 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE--EG--ELRQH----WRMETDRH-KTEDEYGMLVKQ 45 (268)
T ss_dssp EEEEEECSSEEEEEEEE--TT--EEEEE----EEEECCTT-CCHHHHHHHHHH
T ss_pred EEEEEECcCcEEEEEEE--CC--EEEEE----EEecCCCc-CCHHHHHHHHHH
Confidence 68999999999999986 22 34433 55554332 256666665544
No 60
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=70.65 E-value=11 Score=40.09 Aligned_cols=48 Identities=21% Similarity=0.377 Sum_probs=36.0
Q ss_pred EEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhcc
Q 010456 445 VVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 445 ~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~ 501 (510)
.|-++||. -+++.+.+.+.+.+ + ..|..-...+++.+|||++|+++.-
T Consensus 405 ~i~v~GGg-aks~~~~Qi~ADvl----g----~pV~~~~~~E~~alGAA~lA~~a~G 452 (526)
T 3ezw_A 405 ALRVDGGA-VANNFLMQFQSDIL----G----TRVERPEVREVTALGAAYLAGLAVG 452 (526)
T ss_dssp EEEEESGG-GGCHHHHHHHHHHH----T----SEEEEESCCCHHHHHHHHHHHHHTT
T ss_pred EEEEECch-hhCHHHHHHHHHHH----C----CEEEeCCCCchHHHHHHHHHHHHhC
Confidence 45577776 47888888777654 3 3576666788999999999998874
No 61
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=65.78 E-value=10 Score=40.58 Aligned_cols=46 Identities=17% Similarity=0.174 Sum_probs=33.2
Q ss_pred EEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhc
Q 010456 446 VAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHS 500 (510)
Q Consensus 446 I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~ 500 (510)
|-++||.- +++.+.+.+.+.+ + ..|......+++.+|||++|+.+.
T Consensus 438 i~~~GGga-~s~~~~Qi~ADv~----g----~pV~~~~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 438 ILATGGAS-HNREILQVLADVF----D----APVYVIDTANSACVGSAYRAFHGL 483 (538)
T ss_dssp EEEEEGGG-GCHHHHHHHHHHH----T----SCEEECCCTTHHHHHHHHHHHHHH
T ss_pred EEEEcchh-cCHHHHHHHHHHh----C----CceEecCCCCchHHHHHHHHHHHh
Confidence 44556653 7888888777754 3 256554567899999999998765
No 62
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=63.19 E-value=24 Score=37.23 Aligned_cols=48 Identities=23% Similarity=0.214 Sum_probs=35.9
Q ss_pred EEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhcc
Q 010456 445 VVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 445 ~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~ 501 (510)
.|-++||.- +++.+.+.+.+.+ + ..|......+++.+|||++|+.+.-
T Consensus 403 ~i~~~GGga-~s~~~~Qi~ADv~----g----~pV~~~~~~e~~alGaA~lA~~a~G 450 (508)
T 3ifr_A 403 RFFASDGGT-RSRVWMGIMADVL----Q----RPVQLLANPLGSAVGAAWVAAIGGG 450 (508)
T ss_dssp EEEEESGGG-GCHHHHHHHHHHH----T----SCEEEEECCSTHHHHHHHHHHHHTC
T ss_pred EEEEeCCcc-cCHHHHHHHHHHh----C----CeEEecCCCCchHHHHHHHHHHHhC
Confidence 355777754 7888887777654 3 3577767788999999999998764
No 63
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=62.04 E-value=15 Score=39.48 Aligned_cols=50 Identities=16% Similarity=0.300 Sum_probs=37.4
Q ss_pred EEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhcc
Q 010456 444 TVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 444 ~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~ 501 (510)
-.|-++||.-.+++.+.+.+.+.+ + ..|.+.-..+++.+|||++|+.+.-
T Consensus 441 ~~i~~~GGga~ks~~~~Qi~ADv~----g----~pV~~~~~~e~~alGaA~lA~~a~G 490 (572)
T 3jvp_A 441 HELYACGGLPQKNHLLMQIFADVT----N----REIKVAASKQTPALGAAMFASVAAG 490 (572)
T ss_dssp EEEEEESSHHHHCHHHHHHHHHHH----T----SCEEEBCCSSHHHHHHHHHHHHHHC
T ss_pred CEEEEEcCchhhCHHHHHHHHHHH----C----CeeEecCCCccHHHHHHHHHHHhcC
Confidence 457788887558888888877764 3 3565555678999999999987654
No 64
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=60.99 E-value=23 Score=37.24 Aligned_cols=48 Identities=17% Similarity=0.322 Sum_probs=35.8
Q ss_pred EEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhcc
Q 010456 445 VVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 445 ~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~ 501 (510)
.|-++||. -+++.+.+.+.+.+ + ..|.+-...+++.+|||++|+.+.-
T Consensus 407 ~i~~~GG~-aks~~~~Qi~Adv~----g----~pV~~~~~~e~~alGaA~la~~a~G 454 (501)
T 3g25_A 407 SLRVDGGA-VKNNFIMQFQADIV----N----TSVERPEIQETTALGAAFLAGLAVG 454 (501)
T ss_dssp EEEEESGG-GGCHHHHHHHHHHH----T----SEEEEESCCCHHHHHHHHHHHHHTT
T ss_pred EEEEecch-hcCHHHHHHHHHHh----C----CceEecCCCcchHHHHHHHHHHHhC
Confidence 45677775 48888888877754 3 3566656778999999999998764
No 65
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=60.00 E-value=23 Score=37.64 Aligned_cols=48 Identities=29% Similarity=0.239 Sum_probs=35.7
Q ss_pred EEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhcc
Q 010456 445 VVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 445 ~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~ 501 (510)
.|-++||. -+++.+.+.+.+.+ + ..|......+++.+|||++|+.+.-
T Consensus 427 ~i~~~GGg-aks~~~~Qi~ADvl----g----~pV~~~~~~e~~alGAA~lA~~a~G 474 (515)
T 3i8b_A 427 RILLIGGG-AKSEAIRTLAPSIL----G----MDVTRPATDEYVAIGAARQAAWVLS 474 (515)
T ss_dssp EEEEESGG-GGCHHHHHHHHHHH----T----SCEEEECCCCHHHHHHHHHHHHHHH
T ss_pred EEEEECch-hcCHHHHHHHHHHh----C----CceEecCCcccHHHHHHHHHHHHcC
Confidence 46677775 38888888877754 3 3566656788999999999987653
No 66
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=58.69 E-value=24 Score=37.28 Aligned_cols=48 Identities=21% Similarity=0.377 Sum_probs=35.3
Q ss_pred EEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhcc
Q 010456 445 VVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 445 ~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~ 501 (510)
.|-++||. -+++.+.+.+.+.+ + ..|.+-...+++.+|||++|+.+.-
T Consensus 404 ~i~~~GGg-a~s~~~~Qi~ADv~----g----~pV~~~~~~e~~alGaA~lA~~a~G 451 (510)
T 2p3r_A 404 ALRVDGGA-VANNFLMQFQSDIL----G----TRVERPEVREVTALGAAYLAGLAVG 451 (510)
T ss_dssp EEEEESGG-GGCHHHHHHHHHHH----T----SEEEEESCCCHHHHHHHHHHHHHHT
T ss_pred EEEEeCch-hcCHHHHHHHHHHh----C----CceEecCCCCcHHHHHHHHHHHHhC
Confidence 35577775 48888888777654 3 3566655778999999999998664
No 67
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=57.17 E-value=28 Score=36.72 Aligned_cols=48 Identities=21% Similarity=0.362 Sum_probs=35.1
Q ss_pred EEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhcc
Q 010456 445 VVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 445 ~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~ 501 (510)
.|-++||. -+++.+.+.+.+.+ + ..|..-...+++.+|||++|+.+.-
T Consensus 406 ~i~~~GGg-a~s~~~~Qi~ADv~----g----~pV~~~~~~e~~alGaA~lA~~a~G 453 (506)
T 3h3n_X 406 LLKVDGGA-AKNDLLMQFQADIL----D----IDVQRAANLETTALGAAYLAGLAVG 453 (506)
T ss_dssp EEEEESGG-GGCHHHHHHHHHHH----T----SEEEECSSSCHHHHHHHHHHHHHTT
T ss_pred EEEEeccc-ccCHHHHHHHHHHh----C----CeEEecCCCcchhHHHHHHHHHHhC
Confidence 45677775 47888888877754 3 2565555678999999999998764
No 68
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=56.57 E-value=29 Score=36.52 Aligned_cols=48 Identities=21% Similarity=0.408 Sum_probs=35.3
Q ss_pred EEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhcc
Q 010456 445 VVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 445 ~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~ 501 (510)
.|-++||.- +++.+.+.+.+.+ + ..|......+++.+|||++|+.+.-
T Consensus 406 ~i~~~GG~a-~s~~~~Qi~Adv~----g----~pV~~~~~~e~~alGaA~lA~~~~G 453 (504)
T 2d4w_A 406 ELRVDGGMV-ANELLMQFQADQL----G----VDVVRPKVAETTALGAAYAAGIAVG 453 (504)
T ss_dssp EEEEESGGG-GCHHHHHHHHHHH----T----SCEEEESCSCHHHHHHHHHHHHHHT
T ss_pred eEEEeCCcc-cCHHHHHHHHHHh----C----CeEEeCCCCcchHHHHHHHHHhhcC
Confidence 356777764 7888888777754 3 3566656678999999999988763
No 69
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=56.18 E-value=39 Score=36.06 Aligned_cols=48 Identities=17% Similarity=0.291 Sum_probs=35.8
Q ss_pred EEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhcc
Q 010456 445 VVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 445 ~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~ 501 (510)
.|-++||. -+++.+.+.+.+.+ + ..|......+++.+|||++|+.+.-
T Consensus 445 ~i~~~GG~-aks~~~~Qi~ADv~----g----~pV~~~~~~e~~alGAA~lA~~a~G 492 (554)
T 3l0q_A 445 TMMASGGG-TKNPIFVQEHANAT----G----CAMLLPEESEAMLLGSAMMGTVAAG 492 (554)
T ss_dssp EEEEESGG-GGCHHHHHHHHHHH----C----CEEEEESCSCHHHHHHHHHHHHHTT
T ss_pred EEEEeCcc-ccCHHHHHHHHHhh----C----CeEEecCCCcchHHHHHHHHHHHcC
Confidence 46677775 57888888777754 3 3566656788999999999998764
No 70
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=56.03 E-value=31 Score=36.40 Aligned_cols=48 Identities=13% Similarity=0.237 Sum_probs=35.6
Q ss_pred EEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhcc
Q 010456 445 VVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 445 ~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~ 501 (510)
.|-++||. -+++.+.+.+.+.+ + ..|......+++.+|||++|+.+.-
T Consensus 396 ~i~~~GGg-a~s~~~~Qi~ADv~----g----~pV~~~~~~e~~alGaA~lA~~a~G 443 (504)
T 3ll3_A 396 AINATGGF-LKSDFVRQLCANIF----N----VPIVTMKEQQSGTLAAMFLARQALG 443 (504)
T ss_dssp EEEEESGG-GCSHHHHHHHHHHH----T----SCEEEESCSCHHHHHHHHHHHHHTT
T ss_pred EEEEeCch-hcCHHHHHHHHHhh----C----CeEEecCCCCchhHHHHHHHHHHcC
Confidence 45677775 47888888877754 3 3566655678999999999998764
No 71
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=55.68 E-value=11 Score=36.38 Aligned_cols=46 Identities=26% Similarity=0.324 Sum_probs=30.5
Q ss_pred EEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEE-EcCCcchHHHHHHHHHhc
Q 010456 446 VAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILK-VTEDGSGIGAALLAASHS 500 (510)
Q Consensus 446 I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~-~s~DgSgiGAAl~Aa~~~ 500 (510)
|.+.||+. ++|.+++.+.+.+.. .|.+- ..+..+.+|||++|+-..
T Consensus 212 i~~~GG~a-~n~~~~~~~~~~lg~--------~v~~p~~~~~~~AlGAAl~A~~~~ 258 (270)
T 1hux_A 212 VVMTGGVA-QNYGVRGALEEGLGV--------EIKTSPLAQYNGALGAALYAYKKA 258 (270)
T ss_dssp EEEESGGG-GCHHHHHHHHHHHCS--------CEECCGGGGGHHHHHHHHHHHHHT
T ss_pred EEEeCccc-cCHHHHHHHHHHHCC--------CeEeCCCcchHhHHHHHHHHHHhh
Confidence 56788864 688888888876632 23332 223358999999987643
No 72
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=53.73 E-value=41 Score=33.22 Aligned_cols=62 Identities=19% Similarity=0.269 Sum_probs=42.9
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccc-cC-hhHHHHHHHHHHHHHHhh
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMT-GT-SEDLFDFIASALQQFVEK 159 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~-~~-~~~lFd~IA~~i~~fl~~ 159 (510)
.|-+||+|-.++|..+++..+....++....+...+-+.+.. +. .++-.+-..+++..|.+.
T Consensus 5 ~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~ 68 (315)
T 3mdq_A 5 RIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVI 68 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHH
Confidence 578999999999999999865444455544444555555432 22 456678888888888654
No 73
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=51.63 E-value=82 Score=33.03 Aligned_cols=43 Identities=14% Similarity=0.193 Sum_probs=27.6
Q ss_pred HHHHHHHHhcCCCceEEEEEechHHHHhccccCCCCceEEEEeeC
Q 010456 211 ESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDEDTVAAVIIGT 255 (510)
Q Consensus 211 ~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~~~~~~iglIlGT 255 (510)
+.+.+|.+..|+ +++.++|..+|+.++...........+|+--
T Consensus 126 ~a~~~a~~~AGl--~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~ 168 (509)
T 2v7y_A 126 QATKDAGRIAGL--EVERIINEPTAAALAYGLDKEEDQTILVYDL 168 (509)
T ss_dssp HHHHHHHHHTTC--EEEEEEEHHHHHHHHTTGGGSCSEEEEEEEE
T ss_pred HHHHHHHHHcCC--CeEEEecCHHHHHHHHhhccCCCCEEEEEEC
Confidence 566777777776 5678999999998876543222333444433
No 74
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=51.61 E-value=20 Score=38.85 Aligned_cols=83 Identities=14% Similarity=0.230 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhC
Q 010456 393 RKLIVKICDVVTRRAARLAAAGIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILG 472 (510)
Q Consensus 393 ~~~v~~I~~~V~~RaA~L~Aa~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~ 472 (510)
+..+.++|+-+++|...++-..|. ..+... ..-..+|-+.|+. ..|..++.+++.+ +
T Consensus 302 r~~~e~l~~~~~~~i~~~v~~~L~----~a~~~~-------------~~i~~VvLvGG~s--riP~v~~~l~~~f----g 358 (605)
T 4b9q_A 302 RAKLESLVEDLVNRSIEPLKVALQ----DAGLSV-------------SDIDDVILVGGQT--RMPMVQKKVAEFF----G 358 (605)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHH----HTTCCG-------------GGCSEEEEESGGG--GSHHHHHHHHHHH----T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HcCCCH-------------HHCcEEEEeCCcc--CchHHHHHHHHHh----c
Confidence 344557777777777666555443 222110 0112345555554 6788777777765 4
Q ss_pred CCCcccEEEEEcCCcchHHHHHHHHHhcc
Q 010456 473 DDIAQHVILKVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 473 ~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~ 501 (510)
......+ -....-..|||+.|+..+.
T Consensus 359 ~~~~~~~---nPdeaVA~GAai~a~~l~~ 384 (605)
T 4b9q_A 359 KEPRKDV---NPDEAVAIGAAVQGGVLTG 384 (605)
T ss_dssp SCCCSSS---CTTTHHHHHHHHHHHHHHT
T ss_pred cCcCCCc---ChhHHHHHhHHHHHHHhcC
Confidence 3211111 2245668999999987654
No 75
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=50.32 E-value=31 Score=36.20 Aligned_cols=46 Identities=26% Similarity=0.437 Sum_probs=34.2
Q ss_pred EEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhc
Q 010456 446 VAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHS 500 (510)
Q Consensus 446 I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~ 500 (510)
|-++||.- +++.+.+.+.+.+ + ..|......+++.+|||++|+.+.
T Consensus 402 i~~~GG~a-~n~~~~q~~Adv~----g----~pV~~~~~~e~~alGaA~la~~a~ 447 (495)
T 2dpn_A 402 LKADGGMA-QNRLFLKIQADLL----G----VPVAVPEVTETTALGAALMAGVGA 447 (495)
T ss_dssp EEEESGGG-GCHHHHHHHHHHH----T----SCEEEESCSCHHHHHHHHHHHHHH
T ss_pred EEEecccc-cCHHHHHHHHHHh----C----CeeEecCCcccHHHHHHHHHHhhc
Confidence 55777763 7888888777764 3 256655567899999999998765
No 76
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=48.13 E-value=87 Score=33.75 Aligned_cols=127 Identities=15% Similarity=0.192 Sum_probs=0.0
Q ss_pred eeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccc---ccc---------------------------------
Q 010456 97 GIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPEL---MTG--------------------------------- 140 (510)
Q Consensus 97 G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~---~~~--------------------------------- 140 (510)
+..++||||-||..|+.++ ++.-.++....-...+|.-+ ..+
T Consensus 2 ~~viGIDlGTt~s~va~~~--~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d 79 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIMD--GTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQD 79 (605)
T ss_dssp --CEEEECCSSEEEEEEEE--TTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSS
T ss_pred CCEEEEEcCCcCEEEEEEE--CCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCc
Q ss_pred -------------------------------ChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceeeeecccccccCCc
Q 010456 141 -------------------------------TSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSVSS 189 (510)
Q Consensus 141 -------------------------------~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFPv~q~si~~ 189 (510)
+.+++...+-.++.+....... .-...+.++-|..-+...+
T Consensus 80 ~~v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~--------~~v~~~VitVPa~f~d~qr 151 (605)
T 2kho_A 80 EEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLG--------EPVTEAVITVPAYFNDAQR 151 (605)
T ss_dssp TTHHHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHC--------SCCCEEEEEECTTCCHHHH
T ss_pred HHHHHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--------CCCcEEEEEECCCCCHHHH
Q ss_pred eEEEecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhccccCCC-CceEEEEeeCC
Q 010456 190 GILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHDE-DTVAAVIIGTG 256 (510)
Q Consensus 190 g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~~~-~~~iglIlGTG 256 (510)
+.+.+|....|+ +++.|+|+.+|+.++...... ....-+|+--|
T Consensus 152 ---------------------~a~~~A~~~AGl--~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlG 196 (605)
T 2kho_A 152 ---------------------QATKDAGRIAGL--EVKRIINEPTAAALAYGLDKGTGNRTIAVYDLG 196 (605)
T ss_dssp ---------------------HHHHHHHHTTTC--EEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEEC
T ss_pred ---------------------HHHHHHHHHcCC--ceEEEecCHHHHHHHhhhcccCCCCEEEEEECC
No 77
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=47.55 E-value=43 Score=35.17 Aligned_cols=47 Identities=17% Similarity=0.352 Sum_probs=34.9
Q ss_pred EEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhcc
Q 010456 446 VAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 446 I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~ 501 (510)
|-++||.- +++.+.+.+.+.+ + ..|......+++.+|||++|+.+.-
T Consensus 411 i~~~GG~a-~s~~~~Q~~Adv~----g----~pV~~~~~~e~~alGaA~la~~~~G 457 (503)
T 2w40_A 411 LRCDGGMT-KNKPFMQFNSDII----N----TKIEVSKYKEVTSLGAAVLAGLEVK 457 (503)
T ss_dssp EEEESGGG-GCHHHHHHHHHHH----T----SCEEEESCSCHHHHHHHHHHHHHTT
T ss_pred EEEeCccc-cCHHHHHHHHHHH----C----CeEEecCCCcchHHHHHHHHHHHhC
Confidence 55777764 7888888877764 3 3566555678999999999988763
No 78
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=45.77 E-value=41 Score=35.63 Aligned_cols=62 Identities=16% Similarity=0.156 Sum_probs=40.7
Q ss_pred eeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccc-cC-hhHHHHHHHHHHHHHHh
Q 010456 97 GIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMT-GT-SEDLFDFIASALQQFVE 158 (510)
Q Consensus 97 G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~-~~-~~~lFd~IA~~i~~fl~ 158 (510)
-.|=+||+|-.++|..+++..++...++........+-+.+.. +. .++-.+-..+++..|.+
T Consensus 15 ~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~ 78 (508)
T 3hi0_A 15 APVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFHV 78 (508)
T ss_dssp CCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHHH
Confidence 3688999999999999998865433344433333555555432 21 45667778888888755
No 79
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=43.89 E-value=59 Score=34.35 Aligned_cols=47 Identities=23% Similarity=0.338 Sum_probs=34.9
Q ss_pred EEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhcc
Q 010456 446 VAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 446 I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~ 501 (510)
|-++||. -+++.+.+.+.+.+ + ..|......+++.+|||++|+.+.-
T Consensus 429 i~~~GGg-aks~~~~Qi~ADvl----g----~pV~~~~~~e~~alGAA~lA~~a~G 475 (520)
T 4e1j_A 429 LRVDGGM-VASDWTMQRLSDLL----D----APVDRPVILETTALGVAWLAGSRAG 475 (520)
T ss_dssp EEEESGG-GGCHHHHHHHHHHH----T----SCEEEESCCCHHHHHHHHHHHHHHT
T ss_pred EEEeCcc-ccCHHHHHHHHHHh----C----CeEEecCCCccHHHHHHHHHHHHcC
Confidence 5567775 48888888877754 3 3566655688999999999998763
No 80
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=43.54 E-value=23 Score=35.15 Aligned_cols=25 Identities=44% Similarity=0.587 Sum_probs=20.3
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeee
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSS 126 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~ 126 (510)
.++|+|=|.||||+-+++ +| .+..+
T Consensus 7 ~~IavDWGTs~lRa~l~~-~g---~vl~~ 31 (295)
T 3nuw_A 7 RYIAIDWGSTNLRAWLYQ-GE---ECLES 31 (295)
T ss_dssp EEEEEEECSSCEEEEEEE-TT---EEEEE
T ss_pred cEEEEEecchheeeeeec-CC---ceehh
Confidence 699999999999998887 43 45554
No 81
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=43.48 E-value=36 Score=33.90 Aligned_cols=52 Identities=15% Similarity=0.181 Sum_probs=34.0
Q ss_pred cceeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHH
Q 010456 95 EKGIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQ 155 (510)
Q Consensus 95 E~G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~ 155 (510)
+.|.++.+|+||.++=++.++++++. ++... ...... .++++.++|++.|+.
T Consensus 188 ~~~~vlVvDIGgGTtDv~vi~~~~g~--~v~~~------s~~~~l-Gg~~i~~~I~~~i~~ 239 (346)
T 2fsj_A 188 QPGYGVVIDVGSRTTDVLTINLMDME--PVVEL------SFSLQI-GVGDAISALSRKIAK 239 (346)
T ss_dssp CSSEEEEEEECSSCEEEEEEETTTTE--ECGGG------CEEESC-CHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCCcEEEEEEEecCCE--EEeec------CCCcch-hHHHHHHHHHHHHHH
Confidence 45778999999999999999985431 22211 112222 367788888776554
No 82
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=43.40 E-value=52 Score=32.50 Aligned_cols=62 Identities=16% Similarity=0.241 Sum_probs=39.6
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccc-cC-hhHHHHHHHHHHHHHHhh
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMT-GT-SEDLFDFIASALQQFVEK 159 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~-~~-~~~lFd~IA~~i~~fl~~ 159 (510)
.|-+||+|-+++|+.+++..+.....+....+...+-+.+.. +. .++-.+-..+++.+|.+.
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~ 76 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKL 76 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHH
Confidence 688999999999999999864333344443333444444422 21 345566677788888653
No 83
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=41.32 E-value=56 Score=34.03 Aligned_cols=47 Identities=28% Similarity=0.360 Sum_probs=33.9
Q ss_pred EEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCc-chHHHHHHHHHhcc
Q 010456 446 VAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDG-SGIGAALLAASHSS 501 (510)
Q Consensus 446 I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~Dg-SgiGAAl~Aa~~~~ 501 (510)
|-++||.- +++.+.+.+.+.+ + ..|.....++. +.+|||++|+.+.-
T Consensus 390 i~~~GG~a-~s~~~~Qi~Adv~----g----~pV~~~~~~e~~~alGAA~lA~~~~g 437 (484)
T 2itm_A 390 VTLIGGGA-RSEYWRQMLADIS----G----QQLDYRTGGDVGPALGAARLAQIAAN 437 (484)
T ss_dssp EEEESGGG-CCHHHHHHHHHHH----C----CCEEEESCTTSCHHHHHHHHHHHHHC
T ss_pred EEEEeccc-cCHHHHHHHHHHh----C----CeEEeCCCCCcccHHHHHHHHHHHcC
Confidence 55677764 7888888777754 3 35666666674 89999999988653
No 84
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=40.75 E-value=37 Score=35.70 Aligned_cols=47 Identities=17% Similarity=0.165 Sum_probs=35.7
Q ss_pred EEEEEeeEeeecHhHHHHHHHH-HHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhc
Q 010456 445 VVAIEGGLYSSYTLFREYLHEA-LTDILGDDIAQHVILKVTEDGSGIGAALLAASHS 500 (510)
Q Consensus 445 ~I~vdGsl~~~~p~f~~~l~~~-l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~ 500 (510)
.|-++||. -+++.+.+.+.+. + + ..|......+++.+|||++|+.+.
T Consensus 390 ~i~~~GG~-a~s~~w~Qi~ADv~~----g----~pV~~~~~~e~~alGAA~lA~~a~ 437 (482)
T 3h6e_A 390 RILVEGRF-AEADVFVRALASLRP----D----CAVYTANAHNDVSFGALRLIDPGL 437 (482)
T ss_dssp EEEEESGG-GGCHHHHHHHHHHST----T----SEEEEESSCCCTTGGGHHHHCTTC
T ss_pred eEEEeCCc-ccCHHHHHHHhhhcC----C----CeEEEcCCCchHHHHHHHHhCccc
Confidence 46677775 5788888887774 4 3 357666678899999999998874
No 85
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=37.15 E-value=64 Score=32.77 Aligned_cols=79 Identities=14% Similarity=0.031 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHhhhC
Q 010456 393 RKLIVKICDVVTRRAARLAAAGIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTDILG 472 (510)
Q Consensus 393 ~~~v~~I~~~V~~RaA~L~Aa~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~l~~ 472 (510)
..+.+-|..+|..|-+.++.-. | ++.+- + .|.+.|+...++|.+.+.+.+++.-.-.
T Consensus 279 eDIa~gll~sVa~~I~~lA~l~--A--~~~~i-----------------~--~IvftGgfla~n~~~~~~L~~~l~~ws~ 335 (360)
T 2i7n_A 279 EDLARATLVTITNNIGSIARMC--A--LNENI-----------------D--RVVFVGNFLRINMVSMKLLAYAMDFWSK 335 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--H--HHHTC-----------------C--CEEEESGGGCSSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--H--HHcCC-----------------C--eEEEeCcccccCHHHHHHHHHHHhhhhc
Confidence 3456688888888876664321 1 22221 1 3779999889999999999998863311
Q ss_pred CCCcccEE-EEEcCCcchHHHHHHH
Q 010456 473 DDIAQHVI-LKVTEDGSGIGAALLA 496 (510)
Q Consensus 473 ~~~~~~v~-l~~s~DgSgiGAAl~A 496 (510)
. ..++. +++..--+.+|||+.+
T Consensus 336 g--~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 336 G--QLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp T--SCCEEEETTTTCHHHHHHHHHH
T ss_pred C--CeeEEEcCCccHHHHHHHHHHh
Confidence 1 11232 3344445667777754
No 86
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=36.93 E-value=2.5e+02 Score=29.69 Aligned_cols=128 Identities=17% Similarity=0.192 Sum_probs=0.0
Q ss_pred eeEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccc---------------------------------------
Q 010456 97 GIYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPEL--------------------------------------- 137 (510)
Q Consensus 97 G~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~--------------------------------------- 137 (510)
+..++||||-||-.|+.+ ..+.-.++........+|.-+
T Consensus 4 ~~~iGIDlGTt~s~va~~--~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 81 (554)
T 1yuw_A 4 GPAVGIDLGTTYSCVGVF--QHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDA 81 (554)
T ss_dssp CCCEEEEECSSEEEEEEE--CSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCS
T ss_pred CCEEEEEeCcccEEEEEE--ECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcH
Q ss_pred ------------------------------cccChhHHHHHHHHHHHHHHhhcCCCCCCCCCccccceeeeecccccccC
Q 010456 138 ------------------------------MTGTSEDLFDFIASALQQFVEKEGNGSEPPPIRRRELGFTFSFPVKQTSV 187 (510)
Q Consensus 138 ------------------------------~~~~~~~lFd~IA~~i~~fl~~~~~~~~~~~~~~l~lGfTFSFPv~q~si 187 (510)
..-+++++...+-.++.+........ -...+.++-|..
T Consensus 82 ~v~~~~~~~p~~v~~~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~--------~v~~~VitVPa~---- 149 (554)
T 1yuw_A 82 VVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGK--------TVTNAVVTVPAY---- 149 (554)
T ss_dssp HHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSS--------CCCEEEEEECTT----
T ss_pred HHHHHhhcCCeEEEecCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCC--------CCCeEEEEECCC----
Q ss_pred CceEEEecccceecCCCCCchHHHHHHHHHHhcCCCceEEEEEechHHHHhccccCC----CCceEEEEeeCCc
Q 010456 188 SSGILIKWTKGFAIESMVGQEVTESLQRALDKRGLDMRVAALVNDTVGTLALGHYHD----EDTVAAVIIGTGT 257 (510)
Q Consensus 188 ~~g~Li~wtKgF~~~~~~G~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ay~~----~~~~iglIlGTGt 257 (510)
-...=.+.+.+|.+..|+ +++.++|+.+|+.++..... +...+=+=+|-||
T Consensus 150 -----------------f~~~qr~a~~~A~~~AGl--~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT 204 (554)
T 1yuw_A 150 -----------------FNDSQRQATKDAGTIAGL--NVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGT 204 (554)
T ss_dssp -----------------CCHHHHHHHHHHHHTTTC--EEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSC
T ss_pred -----------------CCHHHHHHHHHHHHHcCC--CeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCe
No 87
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=36.16 E-value=65 Score=33.66 Aligned_cols=47 Identities=23% Similarity=0.444 Sum_probs=34.3
Q ss_pred EEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhcc
Q 010456 446 VAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 446 I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~~ 501 (510)
|-++||.- +++.+.+.+.+.+ + ..|......+++.+|||++|+.+.-
T Consensus 397 i~~~GG~a-~s~~~~Qi~Adv~----g----~pV~~~~~~e~~alGaA~lA~~~~g 443 (497)
T 2zf5_O 397 LRVDGGAT-ANDFLMQFQADIL----N----RKVIRPVVKETTALGAAYLAGLAVD 443 (497)
T ss_dssp EEEESGGG-GCHHHHHHHHHHH----T----SCEEEESCSCHHHHHHHHHHHHHTT
T ss_pred EEEeCccc-cCHHHHHHHHhhc----C----CeEEEcCCCcchHHHHHHHHHHHhC
Confidence 45667664 7888888777754 3 3566555678999999999988764
No 88
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=35.87 E-value=21 Score=35.89 Aligned_cols=53 Identities=19% Similarity=0.357 Sum_probs=31.7
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccccChhHHHHHHHHHHHHHH
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMTGTSEDLFDFIASALQQFV 157 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~~~~~~lFd~IA~~i~~fl 157 (510)
.++|+|=|.||||+-+++-+| .+..+. .-+..++.....+|-+-+.+.+.++.
T Consensus 8 ~~IavDWGTSnlRa~l~~~~g---~vl~~~----~~~~Gv~~~~~~~f~~~l~~l~~~w~ 60 (330)
T 3t69_A 8 YYAAVDWGTSSFRLWIIGEDG---AVLAER----RSAEGMTTAAKTGFHTILDGHLAAVS 60 (330)
T ss_dssp CEEEEEECSSCEEEEEECTTS---CEEEEE----EESCCHHHHHHHCHHHHHHHHHHHTT
T ss_pred CEEEEEecchheehheecCCC---Cchhhh----cCCcchhhcCcccHHHHHHHHHHHhh
Confidence 699999999999998874433 455542 23444443223344444555555554
No 89
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=35.56 E-value=58 Score=32.29 Aligned_cols=32 Identities=25% Similarity=0.121 Sum_probs=24.4
Q ss_pred chHHHHHHHHHHhcCCCceEEEEEechHHHHhcc
Q 010456 207 QEVTESLQRALDKRGLDMRVAALVNDTVGTLALG 240 (510)
Q Consensus 207 ~dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ 240 (510)
++.++.+.+++++.|+++ ..|+|..+|...+.
T Consensus 150 ~~~v~~~~~~~~~aGl~~--~~i~~ep~Aaa~~~ 181 (377)
T 2ych_A 150 QEAVAGVLEALRGAGLVP--VVLDVKPFAGLYPL 181 (377)
T ss_dssp HHHHHHHHHHHHHTTCEE--EEEEEHHHHTTGGG
T ss_pred HHHHHHHHHHHHHCCCce--EEEecchHHHHHHH
Confidence 455688888888877654 58899999887764
No 90
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=34.52 E-value=3.7e+02 Score=27.27 Aligned_cols=31 Identities=19% Similarity=-0.015 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHhcCCCceEEEEEechHHHHhcc
Q 010456 208 EVTESLQRALDKRGLDMRVAALVNDTVGTLALG 240 (510)
Q Consensus 208 dv~~lL~~al~r~~l~v~V~alvNDTVgTlla~ 240 (510)
++++-+.+++++.|+++ ..|+|...|...+.
T Consensus 168 ~~v~n~~~~~~~AGL~v--~~lv~ep~Aaa~a~ 198 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSP--FQLKSSLVSTAEGV 198 (419)
T ss_dssp HHHHHHHHHHHTTSCSC--EEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcE--EEEEEHHHHHHHHh
Confidence 47788999999888876 47889998886553
No 91
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=34.00 E-value=95 Score=32.22 Aligned_cols=46 Identities=24% Similarity=0.241 Sum_probs=31.1
Q ss_pred EEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEEEEcCCcchHHHHHHHHHhc
Q 010456 445 VVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVILKVTEDGSGIGAALLAASHS 500 (510)
Q Consensus 445 ~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l~~s~DgSgiGAAl~Aa~~~ 500 (510)
.|-++||.- +++.+.+.+.+.+ + ..|.... .+++.+|||++|+.+.
T Consensus 396 ~i~~~GGga-ks~~~~Qi~ADvl----g----~pV~~~~-~e~~alGaa~~A~~a~ 441 (489)
T 2uyt_A 396 QLHIVGGGC-QNTLLNQLCADAC----G----IRVIAGP-VEASTLGNIGIQLMTL 441 (489)
T ss_dssp EEEEESGGG-GCHHHHHHHHHHH----T----SEEEECC-TTHHHHHHHHHHHHHT
T ss_pred EEEEeCChh-hhHHHHHHHHHHH----C----CeeecCC-ccHhHHHHHHHHHHHc
Confidence 355667764 7888888777754 3 2454333 6899999987776654
No 92
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=33.55 E-value=95 Score=32.83 Aligned_cols=62 Identities=21% Similarity=0.281 Sum_probs=42.7
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeeecCCccccc-cC-hhHHHHHHHHHHHHHHhh
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQPIPPELMT-GT-SEDLFDFIASALQQFVEK 159 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~~Ip~~~~~-~~-~~~lFd~IA~~i~~fl~~ 159 (510)
.|-+||+|-.++|..+++..++...++........+-+.+.. +. .++-.+-..+++..|.+.
T Consensus 12 ~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~ 75 (513)
T 1u6z_A 12 EFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAER 75 (513)
T ss_dssp CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHH
Confidence 588999999999999999865434445444444555555432 21 456778888888888664
No 93
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=33.21 E-value=71 Score=33.62 Aligned_cols=48 Identities=17% Similarity=0.148 Sum_probs=34.7
Q ss_pred EEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccE-EEEEcCCcchHHHHHHHHHhcc
Q 010456 445 VVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHV-ILKVTEDGSGIGAALLAASHSS 501 (510)
Q Consensus 445 ~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v-~l~~s~DgSgiGAAl~Aa~~~~ 501 (510)
.|-++||. -+++.+.+.+.+.+ + ..| ...-..+++.+|||++|+.+.-
T Consensus 405 ~i~~~GGg-a~s~~~~Qi~ADv~----g----~pV~~~~~~~e~~alGaA~lA~~a~G 453 (511)
T 3hz6_A 405 LLKVVGGG-ARSEAWLRMIADNL----N----VSLLVKPDAHLHPLRGLAALAAVELE 453 (511)
T ss_dssp EEEEESGG-GGCHHHHHHHHHHH----T----CEEEECCCGGGHHHHHHHHHHHHHTT
T ss_pred EEEEeCch-hcCHHHHHHHHHHH----C----CeeEEecCCCCchHHHHHHHHHHHhC
Confidence 35577775 58888888877754 3 245 4444678999999999998764
No 94
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=32.36 E-value=66 Score=34.09 Aligned_cols=31 Identities=10% Similarity=0.134 Sum_probs=23.6
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeeeeeeee
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSSDVERQ 131 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~~~~~~ 131 (510)
.||+||+|.|+.|+++++..| .++...+..+
T Consensus 11 ~~lgID~GTts~Ka~l~d~~G---~vv~~~~~~~ 41 (538)
T 4bc3_A 11 CCLGWDFSTQQVKVVAVDAEL---NVFYEESVHF 41 (538)
T ss_dssp EEEEEEECSSEEEEEEEETTC---CEEEEEEEEH
T ss_pred EEEEEEEcCcCEEEEEECCCC---CEEEEEEEec
Confidence 799999999999999998755 3444444444
No 95
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=30.24 E-value=96 Score=30.99 Aligned_cols=63 Identities=8% Similarity=0.135 Sum_probs=41.0
Q ss_pred eEEEEEeCCceeEEEEEEEcCCc-ceeeeeeeeeecCCccccc-cC-hhHHHHHHHHHHHHHHhhc
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQR-SSILSSDVERQPIPPELMT-GT-SEDLFDFIASALQQFVEKE 160 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~-~~i~~~~~~~~~Ip~~~~~-~~-~~~lFd~IA~~i~~fl~~~ 160 (510)
.|-+||+|-.++|..+++...++ ..++....+...+-+.+.. +. .++-.+-..+++.+|.+.-
T Consensus 17 ~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~~~ 82 (343)
T 3cer_A 17 TVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVI 82 (343)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHHHH
Confidence 58899999999999999986322 2334333333444454432 22 4566777888888887653
No 96
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=29.52 E-value=1.3e+02 Score=33.50 Aligned_cols=51 Identities=25% Similarity=0.305 Sum_probs=33.5
Q ss_pred EEEEEEeeEeeecHhHHHHHHHHHHhhhCCCCcccEEE---EEcCCcch-HHHHHHHHHhc
Q 010456 444 TVVAIEGGLYSSYTLFREYLHEALTDILGDDIAQHVIL---KVTEDGSG-IGAALLAASHS 500 (510)
Q Consensus 444 ~~I~vdGsl~~~~p~f~~~l~~~l~~l~~~~~~~~v~l---~~s~DgSg-iGAAl~Aa~~~ 500 (510)
-.|++.|||+ .+...++.+.+.+++. + -++.+ .+..||++ +|+|++|+...
T Consensus 695 ~~VvLsGGVa-~N~~Lr~~L~~~l~~~-g----~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 695 NKVVLSGGSF-QNRYLLRRLIEKLSLS-G----FEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp CEEEEESGGG-GSHHHHHHHHHHHHHT-T----CEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred CEEEEECcHH-HHHHHHHHHHHHHHhC-C----CEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 3688999997 5667777777776542 1 12322 24466665 99999886543
No 97
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=27.62 E-value=1.2e+02 Score=26.78 Aligned_cols=22 Identities=18% Similarity=0.164 Sum_probs=19.0
Q ss_pred eEEEEEeCCceeEEEEEEEcCC
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQ 119 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~ 119 (510)
++|+||.|-++.=.++++..|+
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~ 23 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGR 23 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETT
T ss_pred EEEEEccCCCCeeEEEEEecCC
Confidence 4799999999999999987664
No 98
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=26.73 E-value=1.2e+02 Score=28.95 Aligned_cols=26 Identities=19% Similarity=0.369 Sum_probs=20.5
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcceeeee
Q 010456 98 IYYALDLGGTNFRVLRVQLGGQRSSILSS 126 (510)
Q Consensus 98 ~~LalDlGGTN~RV~~V~l~g~~~~i~~~ 126 (510)
.||+||+|+|+.++++++-.| +++..
T Consensus 4 ~~lGiD~Gst~~k~~l~d~~g---~i~~~ 29 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKDGK---EIVAK 29 (270)
T ss_dssp EEEEEEECSSEEEEEEEETTT---EEEEE
T ss_pred EEEEEEeccceEEEEEEeCCC---CEEEE
Confidence 589999999999999996544 45544
No 99
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=26.25 E-value=2.3e+02 Score=27.51 Aligned_cols=53 Identities=11% Similarity=0.179 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCccccccceEEEEEEeeEeeecHhHHHHHHHHHHh
Q 010456 394 KLIVKICDVVTRRAARLAAAGIVGILKKIGRDGSGGISSGRSRSDIRMRRTVVAIEGGLYSSYTLFREYLHEALTD 469 (510)
Q Consensus 394 ~~v~~I~~~V~~RaA~L~Aa~iaaIl~~~~~~~~~~~~~~~~~~~~~~~~~~I~vdGsl~~~~p~f~~~l~~~l~~ 469 (510)
.+.+.|+.+|.+|-+.|+.-. .++.+- + .|.+.|+...++|..++.+.++++.
T Consensus 211 DIaasl~~sV~~~I~~la~~~----a~~~~i-----------------~--~Vvf~Gg~l~~n~~l~~~l~~~~~~ 263 (287)
T 2ews_A 211 NKLAAVIGVVGEVVTTMAITV----AREFKT-----------------E--NIVYIGSSFHNNALLRKVVEDYTVL 263 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----HHHTTC-----------------C--EEEEESGGGTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHhCCC-----------------C--eEEEeCCchhcCHHHHHHHHHHHhh
Confidence 355688888888866554321 122221 2 4889999778999999999987654
No 100
>3tai_A DNA double-strand break repair protein NURA; recombination, hydrolase; HET: DNA; 2.82A {Pyrococcus furiosus} PDB: 3tal_A* 3taz_A*
Probab=24.69 E-value=68 Score=33.43 Aligned_cols=49 Identities=14% Similarity=0.274 Sum_probs=40.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCccceeEEEEE
Q 010456 51 ETTVSRLRQVVDAMAVEMHAGLASEGGSKLKMLLTFVDNLPTGSEKGIYYALD 103 (510)
Q Consensus 51 ~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~MlPs~v~~lPtG~E~G~~LalD 103 (510)
-+|...+++|.+-+.+++++-...- .+.|++++...+|+..+ ..++|+|
T Consensus 23 ~is~~~~~~I~~~L~~~l~~~~~~~---~ie~i~~~W~elPe~~~-~~iaAVD 71 (471)
T 3tai_A 23 LLSKQSIERITKILLDELENVRENE---QIRNIINSWKPLPSPEK-SSIYAVD 71 (471)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHTTCS---SHHHHHHTCBCCCCCCC-CEEEEEE
T ss_pred eccHhHHHHHHHHHHHHHHHHHhhh---chhhhhhhceECCCCCC-ceEEEec
Confidence 3899999999999999998877652 68899999999997744 4788888
No 101
>1mul_A NS2, HU-2, DNA binding protein HU-alpha; histone-like; HET: DNA; 2.30A {Escherichia coli} SCOP: a.55.1.1 PDB: 2o97_A
Probab=20.91 E-value=1.4e+02 Score=23.43 Aligned_cols=35 Identities=9% Similarity=0.223 Sum_probs=30.1
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcCC
Q 010456 41 GVLRELEEGCETTVSRLRQVVDAMAVEMHAGLASE 75 (510)
Q Consensus 41 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~ 75 (510)
++++.+.+...++..+...+.+.|.+.|...|...
T Consensus 5 eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 1mul_A 5 QLIDVIAEKAELSKTQAKAALESTLAAITESLKEG 39 (90)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 56666777778999999999999999999999863
Done!