BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010458
(510 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SY07|PP302_ARATH Pentatricopeptide repeat-containing protein At4g02820,
mitochondrial OS=Arabidopsis thaliana GN=At4g02820 PE=2
SV=1
Length = 532
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/475 (64%), Positives = 389/475 (81%)
Query: 36 GGRDTLGRRLLSLVYAKRSAAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCE 95
GGRDTLG RLLSLVY KRSA +T+RKWKEEGH+V KYELNRIVRELRK+KRYKHALE+CE
Sbjct: 58 GGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICE 117
Query: 96 WMELQYDIKLVSGDYAVHLDLISKIRGLSSAENFFENLPDKMRGPDTCSALLHSYVQNKK 155
WM +Q DIKL +GDYAVHLDLISKIRGL+SAE FFE++PD+MRG C++LLHSYVQNK
Sbjct: 118 WMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKL 177
Query: 156 SAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLW 215
S +AEAL EKM ECGFLK LPYNHML++YIS GQ +KVP +++ELK TSPD+VTYNLW
Sbjct: 178 SDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLW 237
Query: 216 LAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTC 275
L A AS ND E AEK +L+ K+ K++PDW++YS LT+LY K + EKA LKEMEK
Sbjct: 238 LTAFASGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVS 297
Query: 276 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 335
+KNRVAY+SL+SL+ N+G KD V WKK+ S F KMNDAEY +IS++VKLGEFE+A+
Sbjct: 298 KKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKG 357
Query: 336 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYL 395
+YDEWES+SGTGD R+PN++LA Y+NR+++ + E FY R+V KGI P Y+TWE+LTW YL
Sbjct: 358 LYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYL 417
Query: 396 KKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST 455
K+ MEKVL+CF KAI SV+KW + RL+ A +LEEQG++ GAE L+ L+ AG+V+T
Sbjct: 418 KRKDMEKVLDCFGKAIDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNT 477
Query: 456 EIYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSEMPVSEVSSIFS 510
++YNSLLRTYAKAG+M LI+ ERM KDNV++D ET++++++TS+M V+E+SS S
Sbjct: 478 QLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELIRLTSQMRVTEISSTIS 532
>sp|Q8LPS6|PPR3_ARATH Pentatricopeptide repeat-containing protein At1g02150
OS=Arabidopsis thaliana GN=At1g02150 PE=2 SV=2
Length = 524
Score = 296 bits (758), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 248/413 (60%), Gaps = 5/413 (1%)
Query: 55 AAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYD-IKLVSGDYAVH 113
AA + +W++ G + K+EL R+V+ELRK KR ALEV +WM + + +L + D A+
Sbjct: 83 AASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRLSASDAAIQ 142
Query: 114 LDLISKIRGLSSAENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 173
LDLI K+RG+ AE FF LP+ + +LL++YV+ K +AEAL+ M + G+
Sbjct: 143 LDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMRDKGYAL 202
Query: 174 CPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAF 232
PLP+N M+ LY++ + DKV M+ E+K K+ D+ +YN+WL++C S E E +
Sbjct: 203 HPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVY 262
Query: 233 LELKK-TKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 291
++K I P+W ++ST+ ++YIKM EKA L+++E R +NR+ Y LLSLY +
Sbjct: 263 QQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHYLLSLYGS 322
Query: 292 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 351
+G K E+ R+W S+ + + Y ++SSLV++G+ E AE +Y+EW + + DPR+
Sbjct: 323 LGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSYDPRI 382
Query: 352 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 411
PN+L+ AY+ +QLE AE ++ +V G KP +TWE+L G+ +K + + L C + A
Sbjct: 383 PNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALTCLRNAF 442
Query: 412 GS--VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLL 462
+ W P +++ + EE+ D+ E +L LR +G + + Y +L+
Sbjct: 443 SAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKSYLALI 495
>sp|O22714|PPR86_ARATH Pentatricopeptide repeat-containing protein At1g60770
OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1
Length = 491
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 248/438 (56%), Gaps = 8/438 (1%)
Query: 69 VHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLISKIRGLSSAEN 128
V K+E+ +++LR Y AL++ E ME + K VS D A+HLDL++K R +++ EN
Sbjct: 53 VFKWEVGDTIKKLRNRGLYYPALKLSEVMEERGMNKTVS-DQAIHLDLVAKAREITAGEN 111
Query: 129 FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 188
+F +LP+ + T +LL+ Y + + +AE L+ KM E + YN ++ LY
Sbjct: 112 YFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKT 171
Query: 189 GQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT-KIDPDWIS 246
G+ +KVP M+QELK +N PD TYN+W+ A A+ ND E+ E+ + ++ PDW +
Sbjct: 172 GETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTT 231
Query: 247 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 306
YS + S+Y+ L +KA L+E+E + +++ AY L++LY +G EV RIW+ +
Sbjct: 232 YSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLR 291
Query: 307 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 366
K ++ Y +I LVKL + AE ++ EW++ T D R+ N+L+ AY ++
Sbjct: 292 LAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQ 351
Query: 367 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI----GSVRKWVPDHR 422
A + +G K TWE+ Y+K G M + LEC KA+ G KW+P
Sbjct: 352 KANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPE 411
Query: 423 LITAAYNKLEEQGDIDGAEHLLVTLRNA-GHVSTEIYNSLLRTYAKAGKMPLIIVERMQK 481
+ A + E++ D++GAE+LL L+N ++ EI+ L+RTYA AGK + R++
Sbjct: 412 TVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKM 471
Query: 482 DNVQMDAETQKVLKITSE 499
+NV+++ T+K+L S+
Sbjct: 472 ENVEVNEATKKLLDEVSQ 489
>sp|Q3E911|PP400_ARATH Pentatricopeptide repeat-containing protein At5g27460
OS=Arabidopsis thaliana GN=At5g27460 PE=2 SV=1
Length = 491
Score = 271 bits (692), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/468 (34%), Positives = 255/468 (54%), Gaps = 9/468 (1%)
Query: 23 ITTLGLATEKKGAGGRDTLGRRLLSLVYAKRSAAITMRKWKEEGHTVHKYELNRIVRELR 82
+++L ++ R++L + +L +RS +++ + GH V EL I + L
Sbjct: 23 VSSLADGSDTSSVANRNSL-KEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLI 81
Query: 83 KLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLISKIRGLSSAENFFENLPDK---MRG 139
+ RY AL++ EWME Q DI+ D A+ LDLI K GL E +FE L MR
Sbjct: 82 RSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRV 141
Query: 140 PDTCS-ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 198
+ LL +YV+NK EAEALMEK++ GFL P P+N M+ LY ++GQ +KV ++
Sbjct: 142 AKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVV 201
Query: 199 QELKKNTSP-DVVTYNLWLAACASQNDKETAEKAFLELKKTK-IDPDWISYSTLTSLYIK 256
+K N P +V++YNLW+ AC + E + E+ K ++ W S TL ++YIK
Sbjct: 202 SMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIK 261
Query: 257 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 316
EKA L++ EK R NR+ Y L++LY ++G K+ V+R+W+ S+ +++
Sbjct: 262 SGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVN 321
Query: 317 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 376
Y CV+SSLVK G+ E+AE ++ EWE+ D RV N+LL AY+ ++ AES + ++
Sbjct: 322 YICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVL 381
Query: 377 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK--WVPDHRLITAAYNKLEEQ 434
+G P Y TWE+L G++K MEK ++ + +R+ W P H ++ A E++
Sbjct: 382 ERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKE 441
Query: 435 GDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLIIVERMQKD 482
I+ A + L G S +Y LLR + A + I E M+ D
Sbjct: 442 EKIEEATAYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYDIYEMMKLD 489
>sp|Q84JR3|PP334_ARATH Pentatricopeptide repeat-containing protein At4g21705,
mitochondrial OS=Arabidopsis thaliana GN=At4g21705 PE=2
SV=1
Length = 492
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 159/503 (31%), Positives = 263/503 (52%), Gaps = 21/503 (4%)
Query: 2 FLRSLGATLAAARVFSTKAAKITTLGLATEKKGAGGRDTLGRRLLSLVYAKRSAAITMRK 61
LR + A L A+R + T K TTL ++ L K S ++
Sbjct: 3 ILRRIPANLIASRYYYTNRVKKTTLY---------------SKISPLGDPKSSVYPELQN 47
Query: 62 WKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLISKIR 121
W + G V EL RIV +LR+ KR+ HALEV +WM ++AVHLDLI ++
Sbjct: 48 WVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVY 107
Query: 122 GLSSAENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 181
G +AE +FENL ++ + T ALL+ YV+ + ++ EKM E GF+ L YN++
Sbjct: 108 GFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNI 167
Query: 182 LNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLEL-KKTK 239
+ LY + GQ +KVP++L+E+K+ N +PD +Y + + A + D E ++ ++
Sbjct: 168 MCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQD 227
Query: 240 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 299
I DW +Y+ YI ++A LK E R +K+ Y+ L++LY +G K EVL
Sbjct: 228 ITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVL 287
Query: 300 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 359
R+W + + + +Y V+ SLVK+ +AE + EW+S D RVPN ++ Y
Sbjct: 288 RLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGY 347
Query: 360 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG---SVRK 416
I ++ E AE+ L +G +WEL+ Y +KG +E +C K A+G RK
Sbjct: 348 IGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRK 407
Query: 417 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPL-II 475
W P L+T+ + + ++G + E + +LRN V+ ++Y++L++ + G + +
Sbjct: 408 WRPGLTLVTSVLSWVGDEGSLKEVESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTL 467
Query: 476 VERMQKDNVQMDAETQKVLKITS 498
++RM+ D +++D ET +L S
Sbjct: 468 LQRMKDDKIEIDEETTVILSTRS 490
>sp|Q9SKU6|PP166_ARATH Pentatricopeptide repeat-containing protein At2g20710,
mitochondrial OS=Arabidopsis thaliana GN=At2g20710 PE=2
SV=1
Length = 490
Score = 249 bits (636), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 244/450 (54%), Gaps = 15/450 (3%)
Query: 39 DTLGRRLLSLVYAKRSAAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWME 98
DTL RR+ S + W ++G+ V EL+ I++ LRK R+ HAL++ +WM
Sbjct: 38 DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97
Query: 99 LQYDIKLVSGDYAVHLDLISKIRGLSSAENFFENLPDKMRGPDTCSALLHSYVQNKKSAE 158
++ GD A+ LDLI+K+ GL AE FFE +P + R ALL+ Y K +
Sbjct: 98 EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157
Query: 159 AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLA 217
AE + ++M E GFLK LPYN MLNLY+ G+ V ++L+E++ T PD+ T N L
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217
Query: 218 ACASQNDKETAEKAFLELKKTK-IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT-C 275
A + +D E EK + + + + DW +Y+ + YIK L EKA L++ E+
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNA 277
Query: 276 RKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMN---DAEYTCVISSLVKLGEFEK 332
+K + AY L+S Y G K+EV R+W SL+ +++ + Y VIS+L+K+ + E+
Sbjct: 278 QKRKHAYEVLMSFYGAAGKKEEVYRLW----SLYKELDGFYNTGYISVISALLKMDDIEE 333
Query: 333 AENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW 392
E I +EWE+ D R+P++L+ Y + +E AE N LV K +TWE L
Sbjct: 334 VEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLAL 393
Query: 393 GYLKKGQMEKVLECFKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG 451
GY G+MEK +E +K+AI S W P ++ + + LE Q D++G +L L G
Sbjct: 394 GYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERG 453
Query: 452 HVSTEIYNSLLRTYAKAGKMPLIIVERMQK 481
H+S Y+ LL AG + IV+ M K
Sbjct: 454 HIS---YDQLLYDMNGAG-LSWKIVDAMGK 479
>sp|Q93WC5|PP300_ARATH Pentatricopeptide repeat-containing protein At4g01990,
mitochondrial OS=Arabidopsis thaliana GN=At4g01990 PE=2
SV=1
Length = 502
Score = 234 bits (596), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/440 (30%), Positives = 244/440 (55%), Gaps = 4/440 (0%)
Query: 58 TMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLI 117
T+ ++ EG V K++L R ++LRK ++ + ALE+ EWME + +I D+A+ L+LI
Sbjct: 59 TLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWMERK-EIAFTGSDHAIRLNLI 117
Query: 118 SKIRGLSSAENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 177
+K +GL +AE +F +L D ++ T +LL+ Y K+ +A+A E M + + LP
Sbjct: 118 AKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLP 177
Query: 178 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 236
+N+++ +Y+ GQ +KVP ++ +K K+ +P +TY++W+ +C S D + EK E+K
Sbjct: 178 FNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMK 237
Query: 237 -KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 295
+ + W +++ L ++YIK+ L KA LK +E R Y L++LYT +
Sbjct: 238 AEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIANA 297
Query: 296 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 355
EV R+W + + +N++ Y ++ +L KL + + + ++ EWES T D R+ N+
Sbjct: 298 SEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVA 357
Query: 356 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI-GSV 414
+++Y+ +N E AE+ +N + K +LL LK Q + L+ F+ A+
Sbjct: 358 ISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEAAVLDQD 417
Query: 415 RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLI 474
+ W LI++ + EE D+DGAE TL +S+E Y L++TY AGK
Sbjct: 418 KNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETYTLLMKTYLAAGKACPD 477
Query: 475 IVERMQKDNVQMDAETQKVL 494
+ +R+++ + +D E + +L
Sbjct: 478 MKKRLEEQGILVDEEQECLL 497
>sp|Q9FZ24|PPR4_ARATH Pentatricopeptide repeat-containing protein At1g02370,
mitochondrial OS=Arabidopsis thaliana GN=At1g02370 PE=2
SV=1
Length = 537
Score = 229 bits (583), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 150/514 (29%), Positives = 258/514 (50%), Gaps = 20/514 (3%)
Query: 1 MFLRSLGATLAAARVFSTKAAKITTLGLATEKKGAGGRDTLG------------RRLLSL 48
+F + + A V S AA + +++ G R ++ ++L L
Sbjct: 21 VFAPASATGIVEASVSSPAAANVVEASVSSPAAENGVRTSVAAPTVASRQRELYKKLSML 80
Query: 49 VYAKRSAAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSG 108
+ A T+ ++ EG TV K +L R + LRK +R +HA E+ +WME + +
Sbjct: 81 SVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWME-KRKMTFSVS 139
Query: 109 DYAVHLDLISKIRGLSSAENFFENL-PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMS 167
D+A+ LDLI K +GL +AEN+F NL P T AL++ Y + +A+A E M
Sbjct: 140 DHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMD 199
Query: 168 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKE 226
E F+ LP+N+M+++Y+ Q +KVP ++ +K + SP VTY++W+ +C S ND +
Sbjct: 200 ELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLD 259
Query: 227 TAEKAFLEL-KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 285
EK E+ K ++ W ++S L ++Y K L EKA + LK ME++ NR ++ L
Sbjct: 260 GLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNNRDSHHFL 319
Query: 286 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 345
+SLY + EV R+W+ + ++N+ Y ++ ++ KLG+ + + I+ EWES
Sbjct: 320 MSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCW 379
Query: 346 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 405
D R+ NI + Y+ N E AE + + K P +LL L+ + + ++
Sbjct: 380 AYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLENDKADLAMK 439
Query: 406 CFKKAIGSV----RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSL 461
+ A+ +W L++ + E+ D+DGAE L N + +E L
Sbjct: 440 HLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKPLDSETMTFL 499
Query: 462 LRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLK 495
++TYA A K + ER+ + +++ E Q +LK
Sbjct: 500 IKTYAAAEKTSPDMRERLSQQQIEVSEEIQDLLK 533
>sp|Q94B59|PP372_ARATH Pentatricopeptide repeat-containing protein At5g09450,
mitochondrial OS=Arabidopsis thaliana GN=At5g09450 PE=2
SV=1
Length = 409
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 179/307 (58%), Gaps = 4/307 (1%)
Query: 38 RDTLGRRLLSLVYAKRSAAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWM 97
+D L R+ L KRSA + KW EG+ + EL I +ELR+ +RYKHALEV EWM
Sbjct: 54 KDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWM 113
Query: 98 ELQYDIKLVSGDYAVHLDLISKIRGLSSAENFFENLPDKMRGPDTCSALLHSYVQNKKSA 157
+ K+ DYA +DLISK+ G+ +AE +FE L + +T ++LLH+Y +K++
Sbjct: 114 VQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTE 173
Query: 158 EAEALMEKMSECGFLKC-PLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLW 215
AEAL +++ E L + YN M+ LY+S GQ++KVP++++ LK K SPD+ TYNLW
Sbjct: 174 RAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLW 233
Query: 216 LAACASQNDKETAEKAFLELKK-TKIDPDWISYSTLTSLYIKMELPEKAATTLK-EMEKR 273
L++CA+ + + K E++ + W+ Y LTS+YI A +TL E EK
Sbjct: 234 LSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKS 293
Query: 274 TCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 333
++ + Y L+ L+T +G K + +IWK + + ++ Y CV+SS + LG +A
Sbjct: 294 ISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREA 353
Query: 334 ENIYDEW 340
E I +W
Sbjct: 354 EEIIHQW 360
>sp|Q9C7F1|PPR61_ARATH Putative pentatricopeptide repeat-containing protein At1g28020
OS=Arabidopsis thaliana GN=At1g28020 PE=3 SV=2
Length = 566
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 146/476 (30%), Positives = 233/476 (48%), Gaps = 40/476 (8%)
Query: 53 RSAAI--TMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDY 110
R+A I + +W+++G+ V+ + I+++LR + AL+V EWM + L+ D+
Sbjct: 48 RNAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDF 107
Query: 111 AVHLDLISKIRGLSSAENFFENLPDKMRGPDTCSALLHSYVQNKKS-AEAEALMEKMSEC 169
A L LI + GL AE FFE++P RG ++LL+SY ++ K+ +AEA +KM +
Sbjct: 108 AARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDL 167
Query: 170 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETA 228
G L P+PYN M++LY + +KV ++L E+K N D VT N L ++ D
Sbjct: 168 GLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEM 227
Query: 229 EKAFLELKKTK-IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN-RVAYSSLL 286
EK + + I +W + + Y++ KA L+ E+ +K+ + AY L+
Sbjct: 228 EKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLM 287
Query: 287 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 346
LY G ++EVLR+WK S + ++ Y VI SL+K+ + AE IY WES+
Sbjct: 288 KLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLE 347
Query: 347 GDPRVPNILLAAYINRNQLEMAESFYN------RLVTKGIKPCYTTWELLTWGYLKKGQM 400
D R+P +L + Y +R E AE N R + K + P L WG K
Sbjct: 348 FDHRIPTMLASGYRDRGMTEKAEKLMNSKTIKDRRMNKPVTPL-----LEQWGDQMKPSD 402
Query: 401 EKVL-------ECFKKAIGSVRKWVPDHRLIT------AAYNKLEEQGDIDGAEHLLVTL 447
K L + F KA+ V +W+ + ++ AA L E ++ G E
Sbjct: 403 LKCLIKNLRDSKQFSKAL-QVSEWMGEKQVCNLYLEDYAARLYLTE--NVLGLEEAEKYF 459
Query: 448 RNAGHVSTE--IYNSLLRTYAKA----GKMPLIIVERMQKDNVQMDAET-QKVLKI 496
N + +Y +LL +YAK+ G M I+ M+++NV D T VLK+
Sbjct: 460 ENIPENMKDYSVYVALLSSYAKSDKNLGNMVDEILREMEENNVDPDLITVNHVLKV 515
>sp|Q9C977|PP135_ARATH Pentatricopeptide repeat-containing protein At1g80270,
mitochondrial OS=Arabidopsis thaliana GN=At1g80270 PE=1
SV=1
Length = 596
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 206/436 (47%), Gaps = 13/436 (2%)
Query: 54 SAAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVH 113
S + KW EEG+ + + E+ + + +LR+ + Y AL++ EW+E I++ DYA
Sbjct: 143 SIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYASR 202
Query: 114 LDLISKIRGLSSAENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 173
LDL KIRGL E + +P +G LL + V ++E + KM + GF
Sbjct: 203 LDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPL 262
Query: 174 CPLPYNHMLNLY--ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKA 231
+ ML L+ I ++ V +++ K+N P ++TY + + + ND E+
Sbjct: 263 SGFTCDQMLLLHKRIDRKKIADVLLLME--KENIKPSLLTYKILIDVKGATNDISGMEQI 320
Query: 232 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 291
+K ++ D+ + + Y L +KA LKEME + NR A+ LLS+Y +
Sbjct: 321 LETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYAS 380
Query: 292 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 351
+G +DEV RIWK S K E I + KL + ++AE I+++ +
Sbjct: 381 LGREDEVKRIWKICES---KPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSST 437
Query: 352 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 411
++LL Y++ L + R+ G + TTW+ L Y++ G++EK KA
Sbjct: 438 YSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKAS 497
Query: 412 --GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTYAKA 468
+ + I Y+K +GD+ E + + +R AG+ S + +L++ Y A
Sbjct: 498 KQSHTKLMMNSFMYIMDEYSK---RGDVHNTEKIFLKMREAGYTSRLRQFQALMQAYINA 554
Query: 469 GKMPLIIVERMQKDNV 484
+ +R++ DN+
Sbjct: 555 KSPAYGMRDRLKADNI 570
>sp|Q9XI21|PPR44_ARATH Pentatricopeptide repeat-containing protein At1g15480,
mitochondrial OS=Arabidopsis thaliana GN=At1g15480 PE=2
SV=2
Length = 594
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 201/435 (46%), Gaps = 11/435 (2%)
Query: 54 SAAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVH 113
S + KW E+G ++ E + +LRK + + AL++ EW++ ++ DYA
Sbjct: 141 SVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYACR 200
Query: 114 LDLISKIRGLSSAENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLK 173
LDLISK+RG E + + +P+ RG LL ++V AEA+ KM + GF
Sbjct: 201 LDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFPL 260
Query: 174 CPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFL 233
N ML LY + +L K+N P++ TY + + S ND E+
Sbjct: 261 STFTCNQMLILYKRVDKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIVE 320
Query: 234 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 293
+K ++ D + + + Y L EKA LKEME + +NR LLS+Y +
Sbjct: 321 TMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYGYLQ 380
Query: 294 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEK---AENIYDEWESISGTGDPR 350
+DEV R+WK + Y V+++++ G+ +K AE ++++ +S
Sbjct: 381 REDEVRRVWKIC------EENPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSN 434
Query: 351 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 410
V ++LL Y++ + + ++ G TW+ + Y++ G++EK KA
Sbjct: 435 VYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLSKA 494
Query: 411 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAG 469
I S ++ P ++ +GD+ E + ++ AG+ S Y +L++ Y A
Sbjct: 495 IQS-KQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNAK 553
Query: 470 KMPLIIVERMQKDNV 484
+ ERM+ DN+
Sbjct: 554 APAYGMKERMKADNI 568
>sp|Q940Q2|PPR19_ARATH Pentatricopeptide repeat-containing protein At1g07590,
mitochondrial OS=Arabidopsis thaliana GN=At1g07590 PE=2
SV=1
Length = 534
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 215/470 (45%), Gaps = 18/470 (3%)
Query: 44 RLLSLVYAKRSAAIT----MRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMEL 99
+ LSL K +T ++ W +G VH ++ + LRKL R K ALE+ EW+
Sbjct: 66 KCLSLRIEKLPKGVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIR 125
Query: 100 QYDIKLVSGDYAVHLDLISKIRGLSSAENFFENLPDKMRGPDTCSALLHSYVQNKKSAEA 159
+ +L +Y+ L+ K+ G+S E F +P + + + L+ + + A
Sbjct: 126 ERPYRLGELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLA 185
Query: 160 EALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAA 218
M+KM E G+ L YN ++ + G+ + + L +K + +P V TY++ +
Sbjct: 186 LEYMKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKL 245
Query: 219 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 278
A++++ + KAF +KK ++P+ +SY L + L A +E+EK N
Sbjct: 246 EANEHNIDGVLKAFDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDN 305
Query: 279 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 338
L+ LY +G + E+ R W ++ F + Y + ++G ++AE ++
Sbjct: 306 WSTLDILMILYGRLGKEKELARTW-NVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWL 364
Query: 339 EWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 398
E +++ G + N LL+ Y +E A + + G KP T+ L G K
Sbjct: 365 EMKNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAK 424
Query: 399 QMEKVLECFK--------KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 450
M++ L+ + K+IGS W+ I + E+GD++ +E L ++NA
Sbjct: 425 LMKEALKNIEMGLNLKTSKSIGSSTPWLETTLSIIECF---AEKGDVENSEKLFEEVKNA 481
Query: 451 GHVSTE-IYNSLLRTYAKAGKMPLIIVERMQKDNVQMDAETQKVLKITSE 499
+ +YN+L + Y KA + +RM + DAE+ +LK+ +
Sbjct: 482 KYNRYAFVYNALFKAYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLVEQ 531
>sp|Q9LRP6|PP234_ARATH Pentatricopeptide repeat-containing protein At3g15590,
mitochondrial OS=Arabidopsis thaliana GN=At3g15590 PE=2
SV=1
Length = 610
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 195/456 (42%), Gaps = 14/456 (3%)
Query: 36 GGRDTLGR---RLLSLVYAKRSAAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALE 92
GG+ T R L + A +S + KW +EG + + E+ + LRK K Y L+
Sbjct: 135 GGKPTKKRGQSELYESIVAYKSVKHVLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQ 194
Query: 93 VCEWMELQYDIKLVSGDYAVHLDLISKIRGLSSAENFFENLPDKMRGPDTCSALLHSYVQ 152
+ EW+ + +YA LDL++K+ L AE F +++P+ RG LL + V
Sbjct: 195 LWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVL 254
Query: 153 NKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTY 212
+AE + KM E F N +L LY + + +L ++N P TY
Sbjct: 255 KHHVNKAEDIFNKMKELKFPTSVFACNQLLLLYSMHDRKKISDVLLLMERENIKPSRATY 314
Query: 213 NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEK 272
+ + + D EK +K+ I+ D S L YI+ L E+A +KE+E
Sbjct: 315 HFLINSKGLAGDITGMEKIVETIKEEGIELDPELQSILAKYYIRAGLKERAQDLMKEIEG 374
Query: 273 RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEK 332
+ ++ SLL LY ++G D V R +S F N Y IS++ G+ ++
Sbjct: 375 KGLQQTPWVCRSLLPLYADIGDSDNVRR-----LSRFVDQN-PRYDNCISAIKAWGKLKE 428
Query: 333 AENIYDEWESISGTGD--PRVPNI-LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWEL 389
E +E + P +P L+ Y L R+ GI +TW
Sbjct: 429 VEEAEAVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHA 488
Query: 390 LTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRN 449
L Y+K G++ K +A K P A + ++GD+ E + + ++
Sbjct: 489 LVKLYIKAGEVGKAELILNRATKD-NKMRPMFTTYMAILEEYAKRGDVHNTEKVFMKMKR 547
Query: 450 AGHVSTEI-YNSLLRTYAKAGKMPLIIVERMQKDNV 484
A + + + Y ++L Y A ++ERM+ DNV
Sbjct: 548 ASYAAQLMQYETVLLAYINAKTPAYGMIERMKADNV 583
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 204/431 (47%), Gaps = 15/431 (3%)
Query: 73 ELNRIVRELRKLKRYKHALEVCEWME---LQYDIKLVSGDYAVHLDLISKIRGLSSAENF 129
E N+++ + K+ +++ + + E M+ + +D+ Y++ ++ + LS A
Sbjct: 85 EFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT----YSIFINCFCRRSQLSLALAV 140
Query: 130 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYI 186
+ PD T S+LL+ Y +K+ ++A AL+++M E G+ + +++ L++
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 187 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 246
N + V + Q +++ PD+VTY + + D + A +++K KI+ D +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 247 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 306
Y+T+ K + + A EM+ + R + YSSL+S N G + R+ M+
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 307 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 366
N ++ +I + VK G+ +AE +YDE S D + L+ + ++L+
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 367 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 426
A+ + +++K P T+ L G+ K ++E+ +E F++ S R V + T
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM--SQRGLVGNTVTYTT 438
Query: 427 AYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDN 483
+ + D D A+ + + + G H + YN LL K GK+ +++ E +Q+
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 484 VQMDAETQKVL 494
++ D T ++
Sbjct: 499 MEPDIYTYNIM 509
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 146/328 (44%), Gaps = 4/328 (1%)
Query: 144 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 202
+ ++ + K +A L +M G Y+ +++ + G+ ++L ++ +
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 203 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 262
+ +P+VVT++ + A + AEK + E+ K IDPD +YS+L + + + ++
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 263 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 322
A + M + C N V YS+L+ + +E + ++++M N YT +I
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 323 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 382
+ + + A+ ++ + S+ + NILL +L A + L ++P
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 383 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 442
T+ ++ G K G++E E F S++ P+ + +G + A+
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNL--SLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 443 LLVTLRNAGHV-STEIYNSLLRTYAKAG 469
LL ++ G + ++ YN+L+R + G
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRARLRDG 587
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 100/287 (34%), Gaps = 37/287 (12%)
Query: 192 DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 251
D V +K P +V +N L+A A N E +++ I D +YS
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 252 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN----------------MGYK 295
+ + + A L +M K + V SSLL+ Y + MGYK
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 296 DEVLRIWKKMMSLFAKMNDAE-------------------YTCVISSLVKLGEFEKAENI 336
+ + LF +E Y V++ L K G+ + A ++
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 337 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 396
+ E D + N ++ ++ A + + + KGI+P T+ L
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 397 KGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHL 443
G+ I RK P+ +A + ++G + AE L
Sbjct: 306 YGRWSDASRLLSDMIE--RKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 94/247 (38%), Gaps = 5/247 (2%)
Query: 226 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 285
+ A F ++ K++ P + ++ L S KM E + ++M+ + YS
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 286 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 345
++ + L + KMM L + + + +++ A + D+ +
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 346 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 405
D L+ N+ A + +++V +G +P T+ + G K+G ++ L
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 406 CFKKA-IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLR 463
KK G + V + I K + +D A +L + N G Y+SL+
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKH---MDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 464 TYAKAGK 470
G+
Sbjct: 302 CLCNYGR 308
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 199/424 (46%), Gaps = 15/424 (3%)
Query: 73 ELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSG--DYAVHLDLISKIRGLSSAENFF 130
E N+++ + K+K++ + + E M+ +++V G Y + ++ + +S A
Sbjct: 87 EFNKLLSAIAKMKKFDVVISLGEKMQ---RLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 131 ENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYIS 187
+ P T S+LL+ Y K+ ++A AL+++M E G+ + + +++ L++
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 188 NGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISY 247
N + V + + +++ P++VTY + + + D + A +++ KI+ D + +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 248 STLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS 307
+T+ K + A KEME + R N V YSSL+S + G + ++ M+
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 308 LFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEM 367
N + +I + VK G+F +AE +YD+ S D N L+ + ++L+
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 368 AESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAA 427
A+ + +V+K P T+ L G+ K ++E E F++ S R V D T
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYTTL 441
Query: 428 YNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDN 483
L GD D A+ + + + G V +I Y+ LL GK+ L + + MQK
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 484 VQMD 487
+++D
Sbjct: 501 IKLD 504
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 132/299 (44%), Gaps = 3/299 (1%)
Query: 114 LDLISKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGF 171
+D + K R + A N F+ + K P+ T S+L+ + ++A L+ M E
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 172 LKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEK 230
+ +N +++ ++ G+ + ++ ++ K++ PD+ TYN + + + A++
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 231 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 290
F + PD ++Y+TL + K + E +EM R + V Y++L+
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 291 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 350
+ G D +++K+M+S + Y+ ++ L G+ EKA ++D + D
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 351 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 409
+ ++ +++ + L KG+KP T+ + G K +++ KK
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 107/252 (42%), Gaps = 7/252 (2%)
Query: 123 LSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 180
L A+ FE + K PD T + L+ + ++K+ + L +MS G + + Y
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 181 MLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 239
++ +G D ++ +++ PD++TY++ L + E A + F ++K++
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 240 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 299
I D Y+T+ K + + + + N V Y++++S + E
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 300 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR----VPNIL 355
+ KKM N Y +I + ++ G+ + + E S GD V N+L
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620
Query: 356 LAAYINRNQLEM 367
++++ L+M
Sbjct: 621 HDGRLDKSFLDM 632
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 197/423 (46%), Gaps = 11/423 (2%)
Query: 72 YELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLISKIRGLSSAENFFE 131
+E N+++ + K+K++ + + E M+ + I Y + ++ + +S A
Sbjct: 11 FEFNKLLSAIAKMKKFDLVISLGEKMQ-RLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 132 NLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISN 188
+ P T S+LL+ Y K+ ++A AL+++M E G+ + + +++ L++ N
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 189 GQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYS 248
+ V + + +++ P++VTY + + + D + A +++ KI+ D + ++
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 249 TLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL 308
T+ K + A KEME + R N V YSSL+S + G + ++ M+
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 309 FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA 368
N + +I + VK G+F +AE ++D+ S D N L+ + ++L+ A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 369 ESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAY 428
+ + +V+K P T+ L G+ K ++E E F++ S R V D T
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYTTLI 367
Query: 429 NKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNV 484
L GD D A+ + + + G V +I Y+ LL GK+ L + + MQK +
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 485 QMD 487
++D
Sbjct: 427 KLD 429
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 131/299 (43%), Gaps = 3/299 (1%)
Query: 114 LDLISKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGF 171
+D + K R + A N F+ + K P+ T S+L+ + ++A L+ M E
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 172 LKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEK 230
+ +N +++ ++ G+ + ++ ++ K++ PD+ TYN + + + A++
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 231 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 290
F + PD +Y+TL + K + E +EM R + V Y++L+
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 291 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 350
+ G D +++K+M+S + Y+ ++ L G+ EKA ++D + D
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431
Query: 351 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 409
+ ++ +++ + L KG+KP T+ + G K +++ KK
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 107/252 (42%), Gaps = 7/252 (2%)
Query: 123 LSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 180
L A+ FE + K PD T + L+ + ++K+ + L +MS G + + Y
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 181 MLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 239
++ +G D ++ +++ PD++TY++ L + E A + F ++K++
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 240 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 299
I D Y+T+ K + + + + N V Y++++S + E
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 300 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR----VPNIL 355
+ KKM + Y +I + ++ G+ + + E S GD V N+L
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
Query: 356 LAAYINRNQLEM 367
++++ L+M
Sbjct: 546 HDGRLDKSFLDM 557
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 114/292 (39%), Gaps = 45/292 (15%)
Query: 74 LNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLISKIRGL---SSAENFF 130
N I+ L K + AL + + ME K + + + LIS + S A
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEME----TKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 131 ENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 188
++ +K P+ T +AL+ ++V+ K EAE L + M + YN ++N + +
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 189 GQLDKVPQMLQEL-KKNTSPDVVTYNLWLAA-CASQ------------------------ 222
+LDK QM + + K+ PD+ TYN + C S+
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 223 ----------NDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEK 272
D + A+K F ++ + PD ++YS L EKA M+K
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 273 RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 324
+ + Y++++ G D+ ++ + K N Y +IS L
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
Query: 75 NRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLISKI---RGLSSAENFFE 131
N +++ K KR + E+ + E+ + + + GD + LI + +A+ F+
Sbjct: 329 NTLIKGFCKSKRVEDGTEL--FREMSH--RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 132 NLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG 189
+ PD T S LL N K +A + + M + Y M+ G
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 190 QLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKID---PDWI 245
++D + L K P+VVTYN ++ S K ++A+ LKK K D PD
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS---KRLLQEAYALLKKMKEDGPLPDSG 501
Query: 246 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 305
+Y+TL +++ +A ++EM R+CR V +S + L NM + + + + M
Sbjct: 502 TYNTLIRAHLRDGDKAASAELIREM--RSCR--FVGDASTIGLVANMLHDGRLDKSFLDM 557
Query: 306 MS 307
+S
Sbjct: 558 LS 559
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 198/433 (45%), Gaps = 19/433 (4%)
Query: 73 ELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGD---YAVHLDLISKIRGLSSAENF 129
E ++++ + K+K++ + E ME I VS + Y + ++ + + LS A
Sbjct: 67 EFSKLLSAIAKMKKFDLVISFGEKME----ILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 130 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYI 186
+ GP T ++LL+ + + +EA AL+++M E G+ + + +++ L+
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 187 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 246
N + V + + + K PD+VTY + + + + A +++K KI+ D +
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 247 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 306
YST+ K + A EM+ + R + YSSL+S N G + R+ M+
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 307 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQ 364
N + +I + K G+ +AE ++DE I + DP + N L+ + ++
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM--IQRSIDPNIVTYNSLINGFCMHDR 360
Query: 365 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 424
L+ A+ + +V+K P T+ L G+ K ++ +E F+ S R V +
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM--SRRGLVGNTVTY 418
Query: 425 TAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQK 481
T + + D D A+ + + + G H + YN+LL K GK+ +++ E +QK
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 482 DNVQMDAETQKVL 494
++ D T ++
Sbjct: 479 SKMEPDIYTYNIM 491
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 135/303 (44%), Gaps = 3/303 (0%)
Query: 110 YAVHLDLISKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMS 167
Y+ +D + K R + A N F + +K PD T S+L+ + ++A L+ M
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 168 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKE 226
E + +N +++ + G+L + ++ E+ +++ P++VTYN + + +
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 227 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 286
A++ F + PD ++Y+TL + + K + ++M +R N V Y++L+
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 287 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 346
+ D ++K+M+S N Y ++ L K G+ EKA +++ +
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 347 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 406
D NI+ ++E + L KG+KP + + G+ KKG E+
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 407 FKK 409
F K
Sbjct: 543 FIK 545
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 97/229 (42%), Gaps = 3/229 (1%)
Query: 123 LSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 180
L A+ F + K PD T + L++ + + KK + L MS G + + Y
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 181 MLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 239
+++ + D + +++ P+++TYN L E A F L+K+K
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 240 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 299
++PD +Y+ ++ K E + + + + +AY++++S + G K+E
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 300 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 348
++ KM + Y +I + ++ G+ + + E S GD
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 589
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 92/246 (37%), Gaps = 3/246 (1%)
Query: 226 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 285
+ A F E+ K++ P + +S L S KM+ + + ++ME N Y+ +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 286 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 345
++ L I KMM L + +++ +A + D+ +
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 346 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 405
D L+ N+ A + R+V KG +P T+ + G K+G+ + L
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 406 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRT 464
K K D + + + L + +D A +L + N G Y+SL+
Sbjct: 227 LLNKM--EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 465 YAKAGK 470
G+
Sbjct: 285 LCNYGR 290
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 198/425 (46%), Gaps = 17/425 (4%)
Query: 73 ELNRIVRELRKLKRYKHALEVCEWME---LQYDIKLVSGDYAVHLDLISKIRGLSSAENF 129
E N+++ + K+ +++ + + E M+ + +D+ Y++ ++ + LS A
Sbjct: 85 EFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY----TYSIFINCFCRRSQLSLALAV 140
Query: 130 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYI 186
+ PD T S+LL+ Y +K+ ++A AL+++M E G+ + +++ L++
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 187 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 246
N + V + Q +++ PD+VTY + + D + A +++ +I + +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 247 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 306
++T+ K E A EME + R N V Y+SL++ N G + R+ M+
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 307 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 366
N + +I + K G+ +AE +++E S D N+L+ + N+L+
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 367 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 426
A+ + +V+K P T+ L G+ K ++E +E F++ S R V + T
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM--SQRGLVGNTVTYTT 438
Query: 427 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKD 482
+ GD D A+ + + + V T+I Y+ LL GK+ L+I + +QK
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMV-SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS 497
Query: 483 NVQMD 487
++++
Sbjct: 498 EMELN 502
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 144/330 (43%), Gaps = 23/330 (6%)
Query: 144 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LK 202
+ ++ S + + A L +M G + YN ++N + G+ ++L L+
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 203 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 262
K +P+VVT+N + A + AEK E+ + IDPD I+Y+ L + + ++
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 263 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 322
A K M + C N Y++L++ + ++ + ++++M N YT +I
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 323 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 382
+ G+ + A+ ++ + S D +ILL + +L+ A + L ++
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 383 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHR-LITAAYNK--LEEQGDI-- 437
+ + G K G++ + + F S++ V + +I+ +K L+E D+
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSL--SIKPDVVTYNTMISGLCSKRLLQEADDLFR 559
Query: 438 ----DGAEHLLVTLRNAGHVSTEIYNSLLR 463
DG TL N+G YN+L+R
Sbjct: 560 KMKEDG------TLPNSG-----TYNTLIR 578
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 87/234 (37%), Gaps = 35/234 (14%)
Query: 192 DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 251
D V +K P +V +N L+A A N E +++ I D +YS
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 252 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN----------------MGYK 295
+ + + A L +M K + V SSLL+ Y + MGYK
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 296 DEVLRIWKKMMSLFAKMNDAE-------------------YTCVISSLVKLGEFEKAENI 336
+ + LF +E Y V++ L K G+ + A N+
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 337 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 390
++ E+ + + N ++ + +E+A + + TKGI+P T+ L
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/184 (17%), Positives = 71/184 (38%)
Query: 226 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 285
+ A F ++ K++ P + ++ L S KM E + ++M+ + YS
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 286 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 345
++ + L + KMM L + + + +++ A + D+ +
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 346 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 405
D L+ N+ A + +++V +G +P T+ + G K+G ++ L
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 406 CFKK 409
K
Sbjct: 245 LLNK 248
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 199/429 (46%), Gaps = 9/429 (2%)
Query: 72 YELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLISKIRGLSSAENFFE 131
+E N+++ + K+K++ + + E M+ + I Y + ++ + +S A
Sbjct: 86 FEFNKLLSAIAKMKKFDLVISLGEKMQ-RLGISHNLYTYNILINCFCRRSQISLALALLG 144
Query: 132 NLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISN 188
+ P T S+LL+ Y K+ ++A AL+++M E G+ + + +++ L++ N
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 189 GQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYS 248
+ V + + +++ P++VTY + + + D + A +++ KI+ + + YS
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 249 TLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL 308
T+ K + A EME + R N + YSSL+S N + R+ M+
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 309 FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA 368
N + +I + VK G+ +AE +YDE S D + L+ + ++L+ A
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 369 ESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAY 428
+ + +++K P T+ L G+ K ++++ +E F++ S R V + T
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM--SQRGLVGNTVTYTTLI 442
Query: 429 NKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQ 485
+ + D D A+ + + + G H + YN+LL K GK+ +++ E +Q+ ++
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 486 MDAETQKVL 494
T ++
Sbjct: 503 PTIYTYNIM 511
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 137/303 (45%), Gaps = 3/303 (0%)
Query: 110 YAVHLDLISKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMS 167
Y+ +D + K R A N F + +K P+ T S+L+ ++ ++A L+ M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 168 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKE 226
E + +N +++ ++ G+L + ++ E+ K++ PD+ TY+ + + +
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 227 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 286
A+ F + P+ ++Y+TL + + K + ++ +EM +R N V Y++L+
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 287 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 346
+ D ++K+M+S N Y ++ L K G+ EKA +++ +
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 347 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 406
NI++ ++E + L KG+KP + + G+ +KG E+
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 407 FKK 409
F+K
Sbjct: 563 FRK 565
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 36/138 (26%)
Query: 142 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 201
T + L+H + Q + A+ + ++M G + YN +L+ NG+L+K + + L
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 202 K------------------------------------KNTSPDVVTYNLWLAACASQNDK 225
+ K PDV+ YN ++ + K
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556
Query: 226 ETAEKAFLELKKTKIDPD 243
E A+ F ++++ PD
Sbjct: 557 EEADALFRKMREDGPLPD 574
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 183/405 (45%), Gaps = 11/405 (2%)
Query: 73 ELNRIVRELRKLKRYKHALEVCEWMELQYDIK--LVSGDYAVHLDLISKIRGLSSAENFF 130
EL ++ L K++ AL +W Q D + L + A+ + ++ K +SSA N F
Sbjct: 137 ELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMF 196
Query: 131 ENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN 188
L + D S +L+ ++ + + EA + +KM E G + YN +LN++
Sbjct: 197 NGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKM 256
Query: 189 GQL-DKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 246
G +K+ +++++K + +PD TYN + C + + A + F E+K D ++
Sbjct: 257 GTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVT 316
Query: 247 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 306
Y+ L +Y K P++A L EM + V Y+SL+S Y G DE + + +M
Sbjct: 317 YNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA 376
Query: 307 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 366
K + YT ++S + G+ E A +I++E + + N + Y NR +
Sbjct: 377 EKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFT 436
Query: 367 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 426
++ + G+ P TW L + + G +V FK+ + +VP+
Sbjct: 437 EMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA--GFVPERETFNT 494
Query: 427 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAG 469
+ G + A + + +AG V+ ++ YN++L A+ G
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAG-VTPDLSTYNTVLAALARGG 538
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 162/361 (44%), Gaps = 14/361 (3%)
Query: 54 SAAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVH 113
SAA +E+G ++ Y ++ RY+ A+ V + ME + K Y V
Sbjct: 191 SAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKME-EDGCKPTLITYNVI 249
Query: 114 LDLISKIRGLSSAENFFENLPDKMR----GPD--TCSALLHSYVQNKKSAEAEALMEKMS 167
L++ K + + N +L +KM+ PD T + L+ + EA + E+M
Sbjct: 250 LNVFGK---MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK 306
Query: 168 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKE 226
GF + YN +L++Y + + + ++L E+ N SP +VTYN ++A A +
Sbjct: 307 AAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLD 366
Query: 227 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 286
A + ++ + PD +Y+TL S + + E A + +EM C+ N +++ +
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
Query: 287 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 346
+Y N G E+++I+ ++ + + +++ + G + ++ E +
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Query: 347 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG---QMEKV 403
+ N L++AY E A + Y R++ G+ P +T+ + + G Q EKV
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 404 L 404
L
Sbjct: 547 L 547
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 3/185 (1%)
Query: 116 LISKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLK 173
+ SK L AE F L ++ PD T ++++ Y + + A+A +++ M E GF
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTP 662
Query: 174 CPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAF 232
YN ++ ++ + K ++L+E L K PD+++YN + A A + F
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 233 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 292
E++ + I PD I+Y+T Y + E+A ++ M K CR N+ Y+S++ Y +
Sbjct: 723 SEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKL 782
Query: 293 GYKDE 297
KDE
Sbjct: 783 NRKDE 787
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 137/360 (38%), Gaps = 62/360 (17%)
Query: 110 YAVHLDLISKIRGLSSAENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMS 167
Y L + + SA + FE + + P+ C+ A + Y K E + ++++
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 168 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKE 226
CG + +N +L ++ NG +V + +E+K+ P+ T+N ++A + E
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 227 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 286
A + + + PD +Y+T+ + + + E++ L EME C+ N + Y SLL
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 287 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS-------SLV----KLGEFEKAEN 335
Y N K + L + + Y+ VI +LV K +AE
Sbjct: 567 HAYAN-----------GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615
Query: 336 IYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF---------------YNRL----- 375
+ E + + D N +++ Y R + A YN L
Sbjct: 616 AFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHS 675
Query: 376 ---------------VTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD 420
+ KGIKP ++ + + Y + +M F + S VPD
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS--GIVPD 733
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 121/285 (42%), Gaps = 9/285 (3%)
Query: 118 SKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP 175
S+ A + + D PD T + +L + + ++E ++ +M +
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 176 LPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLE 234
L Y +L+ Y + ++ + + +E+ P V + C+ + AE+AF E
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 235 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT---N 291
LK+ PD + +++ S+Y + ++ KA L M++R + Y+SL+ +++ +
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 292 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 351
G +E+LR ++++ K + Y VI + + A I+ E + D
Sbjct: 680 FGKSEEILR---EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT 736
Query: 352 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 396
N + +Y + E A ++ G +P T+ + GY K
Sbjct: 737 YNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 5/196 (2%)
Query: 158 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWL 216
EAE ++ E GF N M+++Y + K +L +K + +P + TYN +
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 217 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 276
+ D +E+ E+ I PD ISY+T+ Y + A+ EM
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 277 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 336
+ + Y++ + Y +E + + + M+ + N Y ++ KL ++A+
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLF 791
Query: 337 YDEWESISGTGDPRVP 352
++ ++ DP P
Sbjct: 792 VEDLRNL----DPHAP 803
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 197/432 (45%), Gaps = 17/432 (3%)
Query: 73 ELNRIVRELRKLKRYKHALEVCEWME---LQYDIKLVSGDYAVHLDLISKIRGLSSAENF 129
E N+++ + K+ ++ + + E M+ + YD+ Y + ++ + L A
Sbjct: 82 EFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLY----SYNILINCFCRRSQLPLALAV 137
Query: 130 FENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYI 186
+ PD T S+LL+ Y K+ +EA AL+++M + + +N +++ L++
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 187 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 246
N + V + + + + PD+ TY + + D + A +++K KI+ D +
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 247 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 306
Y+T+ + A EM+ + R N V Y+SL+ N G + R+ M+
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 307 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 366
N ++ +I + VK G+ +AE +YDE S D + L+ + ++L+
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 367 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 426
A+ + +++K P T+ L G+ K ++E+ +E F++ S R V +
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM--SQRGLVGNTVTYNT 435
Query: 427 AYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKD 482
L + GD D A+ + + + G V +I Y+ LL K GK+ L++ E +QK
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 483 NVQMDAETQKVL 494
++ D T ++
Sbjct: 495 KMEPDIYTYNIM 506
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 155/350 (44%), Gaps = 9/350 (2%)
Query: 110 YAVHLDLISKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMS 167
Y +D + + ++ A N F + +K P+ T ++L+ + ++A L+ M
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 168 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKE 226
E + ++ +++ ++ G+L + ++ E+ K++ PD+ TY+ + + +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 227 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 286
A+ F + P+ ++Y+TL + K + E+ +EM +R N V Y++L+
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 287 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 346
G D +I+KKM+S + Y+ ++ L K G+ EKA +++ +
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 347 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 406
D NI++ ++E + L KG+KP + + G+ +KG E+
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 407 FK--KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVS 454
F+ K G++ + LI A GD + L+ +R+ G V
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARL----RDGDKAASAELIKEMRSCGFVG 603
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 105/283 (37%), Gaps = 39/283 (13%)
Query: 190 QLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYS 248
+LD + E+ ++ P +V +N L+A A N + ++ +I D SY+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 249 TLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL 308
L + + + A L +M K + V SSLL+ Y + E + + +M +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 309 FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA 368
+ N + N L+ N+ A
Sbjct: 180 EYQPNTVTF-----------------------------------NTLIHGLFLHNKASEA 204
Query: 369 ESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAY 428
+ +R+V +G +P T+ + G K+G ++ L KK K D + T
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM--EKGKIEADVVIYTTII 262
Query: 429 NKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 470
+ L +++ A +L + N G + YNSL+R G+
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 171/363 (47%), Gaps = 12/363 (3%)
Query: 140 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQ 196
PD T ++LL+ + + ++A AL+++M E G+ + + +++ L++ N + V
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVAL 205
Query: 197 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 256
+ + +++ PD+VTY + + D + A +++ KI+ + + YST+ K
Sbjct: 206 IDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK 265
Query: 257 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 316
+ A EME + R N + YSSL+S N G + R+ M+ N
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT 325
Query: 317 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI--LLAAYINRNQLEMAESFYNR 374
++ +I + VK G+ KAE +Y+E I + DP + L+ + ++L A+
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEM--IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 375 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQ 434
++ K P T+ L G+ K +++K +E F++ S R V + T + +
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM--SQRGLVGNTVTYTTLIHGFFQA 441
Query: 435 GDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQ 491
D D A+ + + + G H + YN LL K GK+ +++ E +Q+ ++ D T
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Query: 492 KVL 494
++
Sbjct: 502 NIM 504
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 120/257 (46%), Gaps = 1/257 (0%)
Query: 144 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 202
S ++ S + + +A L +M G + Y+ +++ + G+ ++L ++ +
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 203 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 262
+ +P++VT++ + A + AEK + E+ K IDP+ +YS+L + + ++ +
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 263 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 322
A L+ M ++ C N V Y++L++ + D+ + ++++M N YT +I
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 323 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 382
+ + + A+ ++ + S+ + NILL +L A + L ++P
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Query: 383 CYTTWELLTWGYLKKGQ 399
T+ ++ G K G+
Sbjct: 497 DIYTYNIMIEGMCKAGK 513
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 124/267 (46%), Gaps = 5/267 (1%)
Query: 110 YAVHLDLISKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMS 167
Y+ +D + K R A N F + +K P+ T S+L+ + ++A L+ M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 168 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYN-LWLAACASQNDK 225
E + ++ +++ ++ G+L K ++ +E+ K++ P++ TY+ L C
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 226 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 285
E + L ++K + P+ ++Y+TL + + K + +K +EM +R N V Y++L
Sbjct: 376 EAKQMLELMIRKDCL-PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 286 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 345
+ + D ++K+M+S+ N Y ++ L K G+ KA +++ + +
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 346 TGDPRVPNILLAAYINRNQLEMAESFY 372
D NI++ + +M ++
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 39.7 bits (91), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 3/189 (1%)
Query: 280 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 339
+ +S LLS M D V+ +KM L N Y +I+ + A + +
Sbjct: 79 IEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGK 138
Query: 340 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 399
+ D N LL + + N++ A + +++V G KP T+ L G +
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 400 MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIY 458
+ + + + R PD A N L ++GD D A +LL + A + IY
Sbjct: 199 ASEAVALIDRMVQ--RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 459 NSLLRTYAK 467
++++ + K
Sbjct: 257 STVIDSLCK 265
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 91/246 (36%), Gaps = 3/246 (1%)
Query: 226 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 285
+ A F + +++ P I +S L S KM + + ++ME N Y+ L
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 286 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 345
++ + L + KMM L + + +++ A + D+ +
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 346 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 405
D L+ N+ A + +R+V +G +P T+ + G K+G + L
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 406 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRT 464
K K + + + + L + D A +L + N G I Y+SL+
Sbjct: 240 LLNKM--EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 465 YAKAGK 470
G+
Sbjct: 298 LCNYGR 303
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 165/354 (46%), Gaps = 7/354 (1%)
Query: 120 IRGLSSAENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLP 177
+R + A E L +K PD + AL++ + + + +A ++++M F +
Sbjct: 137 LRNIPKAVRVMEIL-EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVT 195
Query: 178 YNHMLNLYISNGQLDKVPQML-QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 236
YN M+ S G+LD ++L Q L N P V+TY + + A + + A K E+
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255
Query: 237 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 296
+ PD +Y+T+ K + ++A ++ +E + C + ++Y+ LL N G +
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315
Query: 297 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 356
E ++ KM S N Y+ +I++L + G+ E+A N+ + T D + L+
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Query: 357 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 416
AA+ +L++A F +++ G P + + K G+ ++ LE F K +G V
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK-LGEV-G 433
Query: 417 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 469
P+ ++ L GD A H+++ + + G EI YNS++ + G
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 140/329 (42%), Gaps = 9/329 (2%)
Query: 146 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 205
+ H ++ E+ L+E M G+ + ++ + + + K ++++ L+K
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 206 SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 265
PDV YN + N + A + ++ PD ++Y+ + + A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 266 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 325
L ++ C+ + Y+ L+ G DE L++ +M+S K + Y +I +
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 326 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYT 385
K G ++A + E D NILL A +N+ + E E ++ ++ P
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 386 TWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPD---HRLITAAYNKLEEQGDIDGAEH 442
T+ +L + G++E+ + K + + PD + + AA+ + +G +D A
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLK--LMKEKGLTPDAYSYDPLIAAFCR---EGRLDVAIE 389
Query: 443 LLVTLRNAGHVSTEI-YNSLLRTYAKAGK 470
L T+ + G + + YN++L T K GK
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGK 418
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 115/249 (46%), Gaps = 1/249 (0%)
Query: 158 EAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWL 216
EA LM++M G YN ++ G +D+ +M++ L+ K PDV++YN+ L
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL 305
Query: 217 AACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCR 276
A +Q E EK ++ K DP+ ++YS L + + E+A LK M+++
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 277 KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENI 336
+ +Y L++ + G D + + M+S + Y V+++L K G+ ++A I
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Query: 337 YDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLK 396
+ + + + + N + +A + A +++ GI P T+ + +
Sbjct: 426 FGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485
Query: 397 KGQMEKVLE 405
+G +++ E
Sbjct: 486 EGMVDEAFE 494
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 126/281 (44%), Gaps = 11/281 (3%)
Query: 132 NLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKM-SECGFLKCP---LPYNHMLNLY 185
NL K PD S LL + + K E E LM KM SE KC + Y+ ++
Sbjct: 288 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE----KCDPNVVTYSILITTL 343
Query: 186 ISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 244
+G++++ +L+ +K K +PD +Y+ +AA + + A + + PD
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 245 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 304
++Y+T+ + K ++A ++ + C N +Y+++ S + G K L + +
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 305 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 364
MMS ++ Y +IS L + G ++A + + S NI+L + ++
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 365 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 405
+E A + +V G +P TT+ +L G G + +E
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 99/218 (45%), Gaps = 3/218 (1%)
Query: 110 YAVHLDLISKIRGLSSAENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMS 167
Y++ + + + + A N + + +K PD S L+ ++ + + A +E M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 168 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKE 226
G L + YN +L NG+ D+ ++ +L + SP+ +YN +A S DK
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 227 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 286
A LE+ IDPD I+Y+++ S + + ++A L +M + V Y+ +L
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 287 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 324
+ ++ + + + M+ + N+ YT +I +
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 104/239 (43%), Gaps = 1/239 (0%)
Query: 176 LPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 234
+ YN +L ++ G+ ++ +++ ++ + P+VVTY++ + E A
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 235 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 294
+K+ + PD SY L + + + + A L+ M C + V Y+++L+ G
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 295 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 354
D+ L I+ K+ + N + Y + S+L G+ +A ++ E S D N
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 355 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 413
+++ ++ A + + P T+ ++ G+ K ++E + + +G+
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 82/191 (42%), Gaps = 3/191 (1%)
Query: 123 LSSAENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 180
L A F E + PD + +L + +N K+ +A + K+ E G YN
Sbjct: 384 LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443
Query: 181 MLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 239
M + S+G + M+ E+ N PD +TYN ++ + + A + ++++ +
Sbjct: 444 MFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503
Query: 240 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 299
P ++Y+ + + K E A L+ M CR N Y+ L+ GY+ E +
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
Query: 300 RIWKKMMSLFA 310
+ ++ + A
Sbjct: 564 ELANDLVRIDA 574
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/470 (21%), Positives = 198/470 (42%), Gaps = 63/470 (13%)
Query: 94 CEWMELQYDIKLVSGDYAVH-------LDLISKIRGLSSAENFFENLPDKMRGPDTCS-- 144
C + L++ LVS Y H + + K+ + AE+ ++P PD S
Sbjct: 36 CGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYN 95
Query: 145 ALLHSYVQNKKSAEAEALMEKM-SECGFLKCP--LPYNHMLNLYISNGQLDKVPQMLQEL 201
+L+ + +N A ++E + + GF+ P + +N + N + LD+V + +
Sbjct: 96 SLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM 155
Query: 202 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 261
K SP+VVTY+ W+ + + A K+F +K+ + P+ ++++ L Y K E
Sbjct: 156 LKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLE 215
Query: 262 KAATTLKEMEKRTCRKNRVAYSSLLS-------------LYTNM---------------- 292
A + KEM + N V Y++L+ +Y+ M
Sbjct: 216 VAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTII 275
Query: 293 ------GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 346
G D ++ KM++ +++ Y +IS L G+ ++A I ++ E
Sbjct: 276 DGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV 335
Query: 347 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK--VL 404
D + ++ AY +++ A + Y++L+ +G +P + G K GQ+ + V
Sbjct: 336 PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVY 395
Query: 405 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLR 463
C +KA + + T + L ++GD E L + AG V + +Y S +
Sbjct: 396 FCIEKA---------NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIA 446
Query: 464 TYAKAGKM--PLIIVERMQKDNVQMD--AETQKVLKITSEMPVSEVSSIF 509
K G + + RM ++ + +D A T + + S+ + E +F
Sbjct: 447 GLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVF 496
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 131/314 (41%), Gaps = 8/314 (2%)
Query: 142 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE- 200
T +AL+ + + + AE + +M E L Y +++ + G D + L +
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 201 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 260
L + D+ Y + ++ + A + +++K+ + PD + ++T+ + Y K
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRM 354
Query: 261 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 320
+ A ++ +R + VA S+++ G E + + K ND YT +
Sbjct: 355 KAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-----CIEKANDVMYTVL 409
Query: 321 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 380
I +L K G+F + E ++ + D + +A + L A R+V +G+
Sbjct: 410 IDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGL 469
Query: 381 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 440
+ L +G KG M + + F + + S PD + E++G++ A
Sbjct: 470 LLDLLAYTTLIYGLASKGLMVEARQVFDEMLNS--GISPDSAVFDLLIRAYEKEGNMAAA 527
Query: 441 EHLLVTLRNAGHVS 454
LL+ ++ G V+
Sbjct: 528 SDLLLDMQRRGLVT 541
>sp|Q9LYT2|PP287_ARATH Pentatricopeptide repeat-containing protein At3g59040
OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2
Length = 583
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 164/375 (43%), Gaps = 12/375 (3%)
Query: 43 RRLLSLVYAKRSAAITMRKWKEEGHTVHKYEL--NRIVRELRKLKRYKHALEVCEWMELQ 100
R L+ + + SA +R++K +G +L +VR ++LK++ E+ EW+ Q
Sbjct: 74 RGLMLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVR-FKQLKKWNLVSEILEWLRYQ 132
Query: 101 YDIKLVSGDYAVHLDLISKIRGLSSAENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAE 158
D+ + + K+ + AE L P+ S AL+ SY + K
Sbjct: 133 NWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNN 192
Query: 159 AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQ----MLQELKKNTSPDVVTYNL 214
AEA+ +M G + Y +L ++ + + + +L E K PD Y++
Sbjct: 193 AEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHM 252
Query: 215 WLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT 274
+ + E A K F + + ++Y++L S + + + +M++
Sbjct: 253 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK---EVSKIYDQMQRSD 309
Query: 275 CRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAE 334
+ + V+Y+ L+ Y ++E L ++++M+ + Y ++ + G E+A+
Sbjct: 310 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 369
Query: 335 NIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGY 394
++ D +L+AY+N + +E AE F+ R+ G +P T+ L GY
Sbjct: 370 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 429
Query: 395 LKKGQMEKVLECFKK 409
K +EK++E ++K
Sbjct: 430 AKANDVEKMMEVYEK 444
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 113/284 (39%), Gaps = 42/284 (14%)
Query: 126 AENFFENLPDKMRGP-----DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 180
AE FE L D+ + P +++ Y + +A + M G + + YN
Sbjct: 228 AEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 287
Query: 181 MLNLYISNGQLDKVPQMLQELKKNTSPDVVTY---------------------------- 212
+++ S ++ K+ +Q + + PDVV+Y
Sbjct: 288 LMSFETSYKEVSKIYDQMQ--RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Query: 213 -------NLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 265
N+ L A A E A+ F +++ +I PD SY+T+ S Y+ E A
Sbjct: 346 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK 405
Query: 266 TLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLV 325
K ++ N V Y +L+ Y ++++ +++KM K N T ++ +
Sbjct: 406 FFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASG 465
Query: 326 KLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 369
+ F A Y E ES D + N+LL+ +++LE A+
Sbjct: 466 RCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAK 509
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 153/332 (46%), Gaps = 7/332 (2%)
Query: 144 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG-QLDKVPQMLQELK 202
SAL+ +Y ++ EA ++ M E G + YN +++ G + +V + E++
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 203 KN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 261
+N PD +T+N LA C+ E A F E+ +I+ D SY+TL K +
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 262 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 321
A L +M + N V+YS+++ + G DE L ++ +M L ++ Y ++
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 322 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 381
S K+G E+A +I E S+ D N LL Y + + + + + + + +
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL 511
Query: 382 PCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAE 441
P T+ L GY K G ++ +E F++ + + D L +A + L + G + A
Sbjct: 512 PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR--ADVVLYSALIDALCKNGLVGSAV 569
Query: 442 HLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM 471
L+ + G +S + YNS++ + ++ M
Sbjct: 570 SLIDEMTKEG-ISPNVVTYNSIIDAFGRSATM 600
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 128/277 (46%), Gaps = 3/277 (1%)
Query: 129 FFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 186
FF+ + PD T ++LL + A L ++M+ + YN +L+
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 187 SNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 245
GQ+D ++L ++ K P+VV+Y+ + A + A F E++ I D +
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 246 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 305
SY+TL S+Y K+ E+A L+EM +K+ V Y++LL Y G DEV +++ +M
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 306 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 365
N Y+ +I K G +++A I+ E++S D + + L+ A +
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 366 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK 402
A S + + +GI P T+ + + + M++
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDR 602
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 3/229 (1%)
Query: 110 YAVHLDLISKIRGLSSAENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMS 167
Y LD I K + A +P K P+ S ++ + + + EA L +M
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 168 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKE 226
G + YN +L++Y G+ ++ +L+E+ DVVTYN L Q +
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496
Query: 227 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 286
+K F E+K+ + P+ ++YSTL Y K L ++A +E + R + V YS+L+
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 287 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAEN 335
G + + +M N Y +I + + +++ +
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 39.7 bits (91), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 89/225 (39%), Gaps = 32/225 (14%)
Query: 142 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 201
T +ALL Y + K E + + +M L L Y+ +++ Y G + ++ +E
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 540
Query: 202 KK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK---- 256
K DVV Y+ + A +A E+ K I P+ ++Y+++ + +
Sbjct: 541 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Query: 257 -----------MELPEKAATTLKEMEKRTCRKNRVA--YSSLLSLYTNMGYKD------- 296
+ A + L E E NRV + L + N KD
Sbjct: 601 DRSADYSNGGSLPFSSSALSALTETE-----GNRVIQLFGQLTTESNNRTTKDCEEGMQE 655
Query: 297 --EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 339
+L +++KM L K N ++ ++++ + FE A + +E
Sbjct: 656 LSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEE 700
>sp|Q5G1S8|PP241_ARATH Pentatricopeptide repeat-containing protein At3g18110,
chloroplastic OS=Arabidopsis thaliana GN=EMB1270 PE=2
SV=2
Length = 1440
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 162/342 (47%), Gaps = 11/342 (3%)
Query: 87 YKHALEVCEWMELQYDIKLVSGDYAVHLDLISKIRGLSSA-ENFFENLPDKMRGPDTCSA 145
++ ALEV EW+ L++ + A L ++ + S A E F P +A
Sbjct: 171 WQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNA 230
Query: 146 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL---- 201
++ Y ++ K ++A+ L++ M + G + + +N ++N + +G L P + EL
Sbjct: 231 MMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGL--TPNLAVELLDMV 288
Query: 202 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 260
PD +TYN L+AC+ ++ + A K F +++ + PD +Y+ + S+Y + L
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348
Query: 261 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 320
+A E+E + + V Y+SLL + ++V ++++M + ++ Y +
Sbjct: 349 AEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
Query: 321 ISSLVKLGEFEKAENIYDEWESISGTG-DPRVPNILLAAYINRNQLEMAESFYNRLVTKG 379
I K G+ + A +Y + + +SG D +L+ + N+ A + + ++ G
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVG 468
Query: 380 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDH 421
IKP T+ L GY K G+ E+ + F + S K PD+
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTK--PDN 508
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 156/356 (43%), Gaps = 24/356 (6%)
Query: 126 AENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN 183
AE+ NL R PD T ++L+ +Y Q A A+ M G N +L+
Sbjct: 771 AESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLH 830
Query: 184 LYISNGQLDKVPQMLQELK----KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 239
+G+L+++ +++EL+ K + ++ L L A A + +K + +K
Sbjct: 831 ALCVDGRLEELYVVVEELQDMGFKISKSSIL---LMLDAFARAGNIFEVKKIYSSMKAAG 887
Query: 240 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 299
P Y + L K + A + EME+ + ++S+L +YT + + +
Sbjct: 888 YLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTV 947
Query: 300 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG-DPRVPNI--LL 356
++++++ + ++ Y +I + + E Y + + G DP++ L+
Sbjct: 948 QVYQRIKETGLEPDETTYNTLI---IMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLI 1004
Query: 357 AAYINRNQLEMAESFYNRLVTKGIK---PCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 413
+A+ + LE AE + L++KG+K Y T ++ + EK+L+ K A
Sbjct: 1005 SAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNA--G 1062
Query: 414 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKA 468
+ + L+ +Y+ G+ AE +L L++ ++T Y+S++ Y ++
Sbjct: 1063 IEPTLATMHLLMVSYSS---SGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRS 1115
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/285 (18%), Positives = 122/285 (42%), Gaps = 11/285 (3%)
Query: 146 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-N 204
+L ++ + E + + M G+L Y M+ L ++ M+ E+++ N
Sbjct: 863 MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN 922
Query: 205 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 264
++ +N L + D + + + +K+T ++PD +Y+TL +Y + PE+
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 265 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 324
+++M Y SL+S + ++ +++++++S K++ + Y ++
Sbjct: 983 LLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042
Query: 325 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 384
G KAE + ++ ++L+ +Y + + AE + L ++
Sbjct: 1043 RDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTT 1102
Query: 385 TTWELLTWGYLK----KGQMEKVLECFKKAIGSVRKWVPDHRLIT 425
+ + YL+ +E++LE K+ + PDHR+ T
Sbjct: 1103 LPYSSVIDAYLRSKDYNSGIERLLEMKKEGLE------PDHRIWT 1141
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 141 DTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQE 200
DT +L+ ++ + K +AE L E++ G Y+ M+ + +G K ++LQ
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 201 LKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 259
+K P + T +L + + +S + + AEK LK T+++ + YS++ Y++ +
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Query: 260 PEKAATTLKEMEK 272
L EM+K
Sbjct: 1118 YNSGIERLLEMKK 1130
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 62/324 (19%), Positives = 133/324 (41%), Gaps = 29/324 (8%)
Query: 181 MLNLYISNGQLDKVPQMLQELKKNTSPD--VVTYNLWLAACASQNDKETAEKAFLELKKT 238
+L Y S+G+ + ++L+ LK++ S ++T L + C N ++ F
Sbjct: 615 ILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYF------ 668
Query: 239 KIDP---DWI-----SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 290
DP W Y TL + E +A+ ++ C + S++ +Y
Sbjct: 669 -ADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYC 727
Query: 291 NMGYKDEVLRIWKKMMSL-FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDP 349
+G+ + ++ + + F YT +I + K ++KAE++ T D
Sbjct: 728 KLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDL 787
Query: 350 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEK---VLEC 406
+ N L++AY E A + +N ++ G P + +L G++E+ V+E
Sbjct: 788 KTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEE 847
Query: 407 FKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVST-EIYNSLLRTY 465
+ + K I + G+I + + +++ AG++ T +Y ++
Sbjct: 848 LQDMGFKISK-----SSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELL 902
Query: 466 AKAGKM--PLIIVERMQKDNVQMD 487
K ++ I+V M++ N +++
Sbjct: 903 CKGKRVRDAEIMVSEMEEANFKVE 926
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 169/362 (46%), Gaps = 10/362 (2%)
Query: 140 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYISNGQLDKVPQ 196
PD T ++LL+ + + ++A +L+ +M E G+ +N +++ L+ N + V
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208
Query: 197 MLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 256
+ + + K PD+VTY + + + D + A ++++ KI+P + Y+T+
Sbjct: 209 VDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
Query: 257 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 316
+ A EM+ + R N V Y+SL+ N G + R+ M+ N
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 317 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 376
++ +I + VK G+ +AE +YDE S D + L+ + ++L+ A+ + ++
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 377 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 436
+K P T+ L G+ K ++++ +E F++ S R V + T + + +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM--SQRGLVGNTVTYTTLIHGFFQARE 446
Query: 437 IDGAEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQK 492
D A+ + + + G V +I Y+ LL GK+ L++ E +Q+ ++ D T
Sbjct: 447 CDNAQIVFKQMVSDG-VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 493 VL 494
++
Sbjct: 506 IM 507
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 147/328 (44%), Gaps = 4/328 (1%)
Query: 144 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 202
+ ++ + K +A L +M G + YN ++ + G+ ++L ++ +
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 203 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 262
+ +P+VVT++ + A + AEK + E+ K IDPD +YS+L + + + ++
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 263 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 322
A + M + C N V Y++L+ + DE + ++++M N YT +I
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 323 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 382
+ E + A+ ++ + S D +ILL N ++E A + L ++P
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Query: 383 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 442
T+ ++ G K G++E + F S++ P+ T + +G + A+
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSL--SLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 443 LLVTLRNAGHV-STEIYNSLLRTYAKAG 469
L ++ G + + YN+L+R + + G
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 114/252 (45%), Gaps = 7/252 (2%)
Query: 123 LSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 180
L A++ FE + K P+ T + L+ + + K+ E L +MS+ G + + Y
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 181 MLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 239
+++ + + D + +++ PD++TY++ L + ETA F L+++K
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 240 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 299
++PD +Y+ + K E + + + N V Y++++S + G K+E
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 300 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR----VPNIL 355
++++M + Y +I + ++ G+ + + E S GD V N+L
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616
Query: 356 LAAYINRNQLEM 367
++++ L+M
Sbjct: 617 HDGRLDKSFLKM 628
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 99/247 (40%), Gaps = 5/247 (2%)
Query: 226 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 285
+ A F ++ K++ P + +S L S KM + + ++M+ N YS L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 286 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 345
++ + L + KMM L + + +++ A ++ + +
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 346 TGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 405
D N L+ N+ A + +R+V KG +P T+ ++ G K+G ++ L
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 406 CFKKA-IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLR 463
KK G + V + I A L +++ A +L + N G + YNSL+R
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDA---LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 464 TYAKAGK 470
G+
Sbjct: 300 CLCNYGR 306
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 174/399 (43%), Gaps = 9/399 (2%)
Query: 77 IVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLISKIRGLSSAENFFENLPDK 136
+ +E ++ +L + ++M+ Q K Y + + L+ + L F+ +P +
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQ 170
Query: 137 --MRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLD-- 192
R + +AL+++Y +N + + L+++M L YN ++N + G LD
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARGGLDWE 229
Query: 193 KVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 251
+ + E++ + PD+VTYN L+ACA + + AE F + I PD +YS L
Sbjct: 230 GLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV 289
Query: 252 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 311
+ K+ EK L EM + +Y+ LL Y G E + ++ +M +
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349
Query: 312 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESF 371
N Y+ +++ + G ++ ++ E +S + D NIL+ + + +
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 372 YNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKL 431
++ +V + I+P T+E + + K G E + + + VP + T
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM--TANDIVPSSKAYTGVIEAF 467
Query: 432 EEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 469
+ + A T+ G + S E ++SLL ++A+ G
Sbjct: 468 GQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGG 506
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 133/311 (42%), Gaps = 6/311 (1%)
Query: 120 IRGLSS-AENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 176
IRGL AE F + D PD T S L+ ++ + ++ + L+ +M+ G L
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 177 PYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLEL 235
YN +L Y +G + + + +++ +P+ TY++ L + + FLE+
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 236 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 295
K + DPD +Y+ L ++ + ++ T +M + + Y ++ G
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH 438
Query: 296 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 355
++ +I + M + + YT VI + + +E+A ++ + + L
Sbjct: 439 EDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSL 498
Query: 356 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 415
L ++ ++ +E+ +RLV GI T+ Y + G+ E+ ++ + S
Sbjct: 499 LYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS-- 556
Query: 416 KWVPDHRLITA 426
+ PD R + A
Sbjct: 557 RCDPDERTLEA 567
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 102/288 (35%), Gaps = 38/288 (13%)
Query: 110 YAVHLDLISKIRGLSSAENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMS 167
Y+ ++ K+R L + + PD S LL +Y ++ EA + +M
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 168 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK------------------------- 202
G Y+ +LNL+ +G+ D V Q+ E+K
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 203 -----------KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT 251
+N PD+ TY + AC E A K + I P +Y+ +
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Query: 252 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAK 311
+ + L E+A M + + + SLL + G E I +++
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIP 524
Query: 312 MNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 359
N + I + + G+FE+A Y + E D R +L+ Y
Sbjct: 525 RNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVY 572
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 142 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 201
T +LL+ + Q + EA +L++ M GF+ + YN ++N N L+ ++ +
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 202 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 260
KK D VTYN ++ ++ A + ++ K KIDP+ I ++ L ++K
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 270
Query: 261 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 320
+A KEM +R+ N Y+SL++ + G + ++ M+S + Y +
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330
Query: 321 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 380
I+ K E ++ E GD N L+ Y +L +A+ +NR+V G+
Sbjct: 331 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Query: 381 KPCYTTWELLTWGYLKKGQMEKVL 404
P T+ +L G++EK L
Sbjct: 391 SPDIVTYNILLDCLCNNGKIEKAL 414
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 91/186 (48%), Gaps = 3/186 (1%)
Query: 123 LSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 180
L A+ F+ + K PD T + L+ + ++K+ + L +M+ G + YN
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 181 MLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 239
+++ Y G+L+ ++ + SPD+VTYN+ L + E A +L+K++
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 240 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 299
+D D I+Y+ + + + ++A + + ++ + + +AY +++S G + E
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Query: 300 RIWKKM 305
++ ++M
Sbjct: 485 KLCRRM 490
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 142 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 201
T + L+H Y Q K A+ + +M +CG + YN +L+ +NG+++K M+++L
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 202 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 260
+K+ D++TYN+ + + + A F L + + PD I+Y T+ S + L
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 261 EKAATTLKEMEK 272
+A + M++
Sbjct: 481 READKLCRRMKE 492
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 113/296 (38%), Gaps = 38/296 (12%)
Query: 201 LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 260
+K P +VT L N + A + P+ + Y+T+ + K
Sbjct: 141 MKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDL 200
Query: 261 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 320
A MEK+ R + V Y++L+S +N G + R+ + M+ N +T +
Sbjct: 201 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 260
Query: 321 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 380
I + VK G +A N+Y E S + N L+ + L A+ ++ +V+KG
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 381 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 440
P T+ L G+ K ++E ++ F ++ QG + A
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLF---------------------CEMTYQGLVGDA 359
Query: 441 EHLLVTLRNAGHVSTEIYNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 494
YN+L+ Y +AGK+ + + RM V D T +L
Sbjct: 360 F---------------TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 95/222 (42%), Gaps = 1/222 (0%)
Query: 178 YNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 236
+ +++ ++ G L + + +E+ +++ P+V TYN + A+ F +
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 237 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 296
PD ++Y+TL + + K + E EM + + Y++L+ Y G +
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 297 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 356
+++ +M+ + Y ++ L G+ EKA + ++ + D NI++
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 357 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 398
++L+ A + L KG+KP + + G +KG
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 119/324 (36%), Gaps = 66/324 (20%)
Query: 75 NRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLISKIRGLSS------AEN 128
N ++ L K + +ALEV ME K + D + LIS GLS+ A
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEK----KGIRADAVTYNTLIS---GLSNSGRWTDAAR 240
Query: 129 FFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYI 186
++ + P+ +AL+ ++V+ EA L ++M + YN ++N +
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 187 SNGQLDKVPQMLQEL-KKNTSPDVVTYN-LWLAACASQNDKE------------------ 226
+G L M + K PDVVTYN L C S+ ++
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 227 ----------------TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM 270
A+K F + + PD ++Y+ L EKA ++++
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 271 EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG-- 328
+K + + Y+ ++ E +++ + K + Y +IS L + G
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 329 -------------EFEKAENIYDE 339
F +E IYDE
Sbjct: 481 READKLCRRMKEDGFMPSERIYDE 504
Score = 36.2 bits (82), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 103/251 (41%), Gaps = 15/251 (5%)
Query: 226 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 285
+ A F E+ +++ P + ++ + ++ KM + +ME + +++ L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 286 LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISG 345
+ + L + KMM L + + +++ + F++A ++ D S+ G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVD---SMDG 177
Query: 346 TGDPRVPNILLAAYI------NRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 399
G VPN+++ + NR+ E FY + KGI+ T+ L G G+
Sbjct: 178 FG--FVPNVVIYNTVINGLCKNRDLNNALEVFYC-MEKKGIRADAVTYNTLISGLSNSGR 234
Query: 400 MEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLV-TLRNAGHVSTEIY 458
+ + RK P+ TA + ++G++ A +L +R + + Y
Sbjct: 235 WTDAARLLRDMVK--RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 459 NSLLRTYAKAG 469
NSL+ + G
Sbjct: 293 NSLINGFCIHG 303
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 157/357 (43%), Gaps = 6/357 (1%)
Query: 142 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 201
+C+ LLH + + K+ + + + M G YN M++ G ++ + +E+
Sbjct: 229 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM 288
Query: 202 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 260
K + PD VTYN + + F E+K +PD I+Y+ L + + K
Sbjct: 289 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKL 348
Query: 261 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 320
+EM+ + N V+YS+L+ + G + ++ + M + N+ YT +
Sbjct: 349 PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408
Query: 321 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 380
I + K+G A + +E + + L+ + +++ AE + ++ T G+
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Query: 381 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 440
P ++ L G++K M++ LE + G R PD L L I+ A
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKG--RGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 441 EHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMP--LIIVERMQKDNVQMDAETQKVL 494
+ ++ ++ G ++ IY +L+ Y K+G L +++ M++ ++++ T VL
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 126/304 (41%), Gaps = 4/304 (1%)
Query: 142 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 201
T +AL+ ++ EAE L KM G + YN +++ ++ +D+ ++L EL
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498
Query: 202 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 260
K + PD++ Y ++ S E A+ E+K+ I + + Y+TL Y K P
Sbjct: 499 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 558
Query: 261 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA-KMNDAEYTC 319
+ L EM++ V + L+ + + + ++ + F + N A +T
Sbjct: 559 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 618
Query: 320 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 379
+I L K + E A ++++ D L+ + + A + +++ G
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
Query: 380 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 439
+K + L WG Q++K ++ IG PD L + K E G ID
Sbjct: 679 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH--PDEVLCISVLKKHYELGCIDE 736
Query: 440 AEHL 443
A L
Sbjct: 737 AVEL 740
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 121/301 (40%), Gaps = 14/301 (4%)
Query: 178 YNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELK 236
++ + ++ I G L++ Q ++K+ P + N L A + ++ F ++
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 237 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 296
P +Y+ + K E A +EM+ R + V Y+S++ + +G D
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 297 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI-- 354
+ + +++M + + + Y +I+ K G+ Y E + G+ PN+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK-----GNGLKPNVVS 369
Query: 355 ---LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 411
L+ A+ ++ A FY + G+ P T+ L K G + + +
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 412 GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGK 470
+W + TA + L + + AE L + AG + + YN+L+ + KA
Sbjct: 430 QVGVEW--NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 471 M 471
M
Sbjct: 488 M 488
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/421 (17%), Positives = 164/421 (38%), Gaps = 46/421 (10%)
Query: 110 YAVHLDLISKIRGLSSAENFFENLPDKMRG--PDTCS--ALLHSYVQNKKSAEAEALMEK 165
Y + +D + K + +A FE + K RG PDT + +++ + + + + E+
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEM--KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 322
Query: 166 MSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQND 224
M + + YN ++N + G+L + +E+K N P+VV+Y+ + A +
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 225 KETAEKAFLELKKTKIDPDWISYSTLTSLYIKM--------------------------- 257
+ A K ++++++ + P+ +Y++L K+
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 258 --------ELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF 309
E ++A +M+ N +Y++L+ + D L + ++
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 310 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 369
K + Y I L L + E A+ + +E + + + L+ AY
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 370 SFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYN 429
+ + I+ T+ +L G K + K ++ F + I + + + TA +
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR-ISNDFGLQANAAIFTAMID 621
Query: 430 KLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM--PLIIVERMQKDNVQM 486
L + ++ A L + G V Y SL+ K G + L + ++M + +++
Sbjct: 622 GLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKL 681
Query: 487 D 487
D
Sbjct: 682 D 682
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 170/404 (42%), Gaps = 11/404 (2%)
Query: 113 HLDLISKIRGLSSAENFFENLPDKMRGPDT--CSALLHSYVQNKKSAEAEALMEKMSECG 170
HL + + L F EN+ PD C+ L+ + + K+ +A ++E + G
Sbjct: 108 HLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSG 167
Query: 171 FLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEK 230
+ + YN M++ Y G+++ +L + + SPDVVTYN L + + A +
Sbjct: 168 AVPDVITYNVMISGYCKAGEINNALSVLDRM--SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 231 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 290
+ + PD I+Y+ L + A L EM R C + V Y+ L++
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 291 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 350
G DE ++ M S + N + ++ S+ G + AE + + +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 351 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKA 410
NIL+ + L A ++ G +P ++ L G+ K+ +M++ +E ++
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 411 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAG 469
+ R PD L + G ++ A +L L + G I YN+++ AKAG
Sbjct: 406 VS--RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 470 KM--PLIIVERMQKDNVQMDAETQKVL--KITSEMPVSEVSSIF 509
K + +++ M+ +++ D T L ++ E V E F
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 131/299 (43%), Gaps = 3/299 (1%)
Query: 110 YAVHLDLISKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMS 167
Y V ++ I K L A F ++P P+ T + +L S + +AE L+ M
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 168 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKE 226
GF + +N ++N G L + +L+++ ++ P+ ++YN L + +
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 227 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 286
A + + PD ++Y+T+ + K E A L ++ + C + Y++++
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 287 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 346
G + +++ +M + K + Y+ ++ L + G+ ++A + E+E +
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516
Query: 347 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 405
+ N ++ Q + A F ++ +G KP T++ +L G +G ++ LE
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALE 575
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 3/221 (1%)
Query: 123 LSSAENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 180
L A + E +P P++ S LLH + + KK A +E+M G + YN
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 181 MLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 239
ML +G+++ ++L +L K SP ++TYN + A A K E++
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 240 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 299
+ PD I+YS+L + ++A E E+ R N V ++S++ D +
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539
Query: 300 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEW 340
M++ K N+ YT +I L G ++A + +E
Sbjct: 540 DFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 101/219 (46%), Gaps = 4/219 (1%)
Query: 90 ALEVCEWMELQYDIKLVSGDYAVHLDLISKIRGLSSAENFFENLPDKMRGPD--TCSALL 147
A+++ E M Q+ + S Y L K + + A + E + + PD T + +L
Sbjct: 363 AIDILEKMP-QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Query: 148 HSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTS 206
+ ++ K +A ++ ++S G + YN +++ G+ K ++L E++ K+
Sbjct: 422 TALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK 481
Query: 207 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 266
PD +TY+ + + + + A K F E ++ I P+ ++++++ K ++A
Sbjct: 482 PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDF 541
Query: 267 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 305
L M R C+ N +Y+ L+ G E L + ++
Sbjct: 542 LVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 193/440 (43%), Gaps = 15/440 (3%)
Query: 54 SAAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVH 113
SA + K ++EG + + + ++ RK + ALE + ME+ + L + VH
Sbjct: 357 SALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEV---LGLTPSVFHVH 413
Query: 114 LDLISKIRGLSSAEN---FFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECG 170
+ ++G E F E+ + C+ +L + K+ EA L+ KM G
Sbjct: 414 TIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRG 473
Query: 171 FLKCPLPYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAE 229
+ YN+++ + +D + L+K P+ TY++ + C +D++ A
Sbjct: 474 IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNAL 533
Query: 230 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEM--EKRTCRKNRVAYSSLLS 287
+ + + I+ + + Y T+ + K+ KA L M EKR C + ++Y+S++
Sbjct: 534 EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC-VSCMSYNSIID 592
Query: 288 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 347
+ G D + +++M N YT +++ L K ++A + DE ++
Sbjct: 593 GFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKL 652
Query: 348 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 407
D L+ + R+ +E A + ++ L+ +G+ P + L G+ G M L+ +
Sbjct: 653 DIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLY 712
Query: 408 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYA 466
KK + + D T + L + G++ A L ++ G V E IY ++ +
Sbjct: 713 KKMLKDGLRC--DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLS 770
Query: 467 KAGKMPLII--VERMQKDNV 484
K G+ ++ E M+K+NV
Sbjct: 771 KKGQFVKVVKMFEEMKKNNV 790
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 158/353 (44%), Gaps = 7/353 (1%)
Query: 55 AAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHL 114
A I E+G + Y + ++ + ++ALEV M +I++ Y +
Sbjct: 497 ARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMT-SSNIEVNGVVYQTII 555
Query: 115 DLISKIRGLSSAENFFENLPDKMRGPDTC---SALLHSYVQNKKSAEAEALMEKMSECGF 171
+ + K+ S A N+ ++ R +C ++++ + + + A A E+M G
Sbjct: 556 NGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI 615
Query: 172 LKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEK 230
+ Y ++N N ++D+ +M E+K K D+ Y + +++ E+A
Sbjct: 616 SPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASA 675
Query: 231 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 290
F EL + ++P Y++L S + + A K+M K R + Y++L+
Sbjct: 676 LFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL 735
Query: 291 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 350
G ++ +M ++ ++ YT +++ L K G+F K +++E + + T +
Sbjct: 736 KDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVL 795
Query: 351 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 403
+ N ++A + L+ A ++ ++ KGI P T+++L G + G ++ V
Sbjct: 796 IYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQV--GNLQPV 846
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 100/230 (43%), Gaps = 1/230 (0%)
Query: 176 LPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLE 234
+ YN +++ + G++D +E+ N SP+V+TY + N + A + E
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 235 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 294
+K + D +Y L + K E A+ E+ + ++ Y+SL+S + N+G
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 295 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 354
L ++KKM+ + + YT +I L+K G A +Y E +++ D + +
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 355 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 404
++ + Q + + + P + + G+ ++G +++
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 142/332 (42%), Gaps = 8/332 (2%)
Query: 146 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY-NHMLNLYISNGQLDKVPQMLQELKK- 203
LL++Y +++++ A ++ +M E + PY N L+ + L + ++ +
Sbjct: 169 LLNAYSKDRQTDHAVDIVNQMLELDVIPF-FPYVNRTLSALVQRNSLTEAKELYSRMVAI 227
Query: 204 NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKA 263
D VT L + A + A + + +PD + YS K A
Sbjct: 228 GVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMA 287
Query: 264 ATTLKEM-EKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 322
+ L+EM EK+ C ++ Y+S++ G D+ +R+ +M+S MN T +I+
Sbjct: 288 NSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLIT 347
Query: 323 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 382
K + A ++D+ E + + ++L+ + ++E A FY ++ G+ P
Sbjct: 348 GHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTP 407
Query: 383 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 442
+ G+LK + E+ L+ F + S + + + + L +QG D A
Sbjct: 408 SVFHVHTIIQGWLKGQKHEEALKLFDE---SFETGLANVFVCNTILSWLCKQGKTDEATE 464
Query: 443 LLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPL 473
LL + + G + YN+++ + + M L
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDL 496
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 163/392 (41%), Gaps = 45/392 (11%)
Query: 144 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 203
++L+ + +N A L +KM + G + ++ ++ + NG+++K + ++++
Sbjct: 343 TSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEV 402
Query: 204 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 262
+P V + + E A K F E +T + ++ +T+ S K ++
Sbjct: 403 LGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVC-NTILSWLCKQGKTDE 461
Query: 263 AATTLKEMEKRTCRKNRVAYSSLL-------------SLYTNM---GYK----------- 295
A L +ME R N V+Y++++ +++N+ G K
Sbjct: 462 ATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID 521
Query: 296 ------DE--VLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA-ENIYDEWESISGT 346
DE L + M S ++N Y +I+ L K+G+ KA E + + E
Sbjct: 522 GCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC 581
Query: 347 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 406
N ++ + +++ A + Y + GI P T+ L G K +M++ LE
Sbjct: 582 VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEM 641
Query: 407 FKKAIG-SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRT 464
+ V+ +P + + + K + +++ A L L G + S IYNSL+
Sbjct: 642 RDEMKNKGVKLDIPAYGALIDGFCK---RSNMESASALFSELLEEGLNPSQPIYNSLISG 698
Query: 465 YAKAGKM--PLIIVERMQKDNVQMDAETQKVL 494
+ G M L + ++M KD ++ D T L
Sbjct: 699 FRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 6/160 (3%)
Query: 112 VHLDLISKIRGLS---SAENFFEN-LPDKMRGP-DTCSALLHSYVQNKKSAEAEALMEKM 166
++ LIS R L +A + ++ L D +R T + L+ +++ A L +M
Sbjct: 691 IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM 750
Query: 167 SECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDK 225
G + + Y ++N GQ KV +M +E+KKN +P+V+ YN +A + +
Sbjct: 751 QAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNL 810
Query: 226 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAAT 265
+ A + E+ I PD ++ L S + P +AA+
Sbjct: 811 DEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAAS 850
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 156/362 (43%), Gaps = 6/362 (1%)
Query: 44 RLLSLVYAKRSAAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQ-YD 102
RL Y +A I R++ E G + N ++ + +L R K A + MEL+ Y
Sbjct: 219 RLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYT 278
Query: 103 IKLVSGDYAVHLDLISKIRGLSSAENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAE 160
++S Y+ ++ + L E + K P++ +++ + K AEAE
Sbjct: 279 PDVIS--YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 161 ALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAAC 219
+M G L + Y +++ + G + + E+ ++ +PDV+TY ++
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 220 ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 279
D A K F E+ ++PD ++++ L + Y K + A M + C N
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 280 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 339
V Y++L+ G D + +M + + N Y +++ L K G E+A + E
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 340 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 399
+E+ D L+ AY +++ A+ ++ KG++P T+ +L G+ G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 400 ME 401
+E
Sbjct: 577 LE 578
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 130/307 (42%), Gaps = 5/307 (1%)
Query: 110 YAVHLDLISKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMS 167
Y +D K + +A FF + + PD T +A++ + Q EA L +M
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 168 ECGFLKCPLPYNHMLNLYISNGQL-DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKE 226
G + + ++N Y G + D ++ SP+VVTY + + D +
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 227 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 286
+A + E+ K + P+ +Y+++ + K E+A + E E + V Y++L+
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 287 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 346
Y G D+ I K+M+ + + +++ G E E + + W G
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN-WMLAKGI 592
Query: 347 G-DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 405
+ N L+ Y RN L+ A + Y + ++G+ P T+E L G+ K M++
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 406 CFKKAIG 412
F++ G
Sbjct: 653 LFQEMKG 659
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 123/303 (40%), Gaps = 3/303 (0%)
Query: 110 YAVHLDLISKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMS 167
Y + +I + A F + K PD T + L++ Y + +A + M
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 168 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKE 226
+ G + Y +++ G LD ++L E+ K P++ TYN + + E
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 227 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 286
A K E + ++ D ++Y+TL Y K +KA LKEM + + V ++ L+
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 287 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 346
+ + G ++ ++ M++ N + ++ + A IY + S
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 347 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 406
D + L+ + ++ A + + KG +T+ +L G+LK+ + + E
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 407 FKK 409
F +
Sbjct: 689 FDQ 691
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 159/365 (43%), Gaps = 5/365 (1%)
Query: 110 YAVHLDLISKIRGLSSAENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMS 167
Y + ++ K L A FE+L R P T + ++ Y K EA +L+E+
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 168 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKET 227
G + + YN +L G++D+ ++ +E+KK+ +P++ TYN+ + +T
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 228 AEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLS 287
A + ++K + P+ + + + K + ++A +EM+ + C + + + SL+
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 288 LYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTG 347
+G D+ ++++KM+ + N YT +I + G E IY + + + +
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 348 DPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 407
D ++ N + + E + + + + P ++ +L G +K G + E F
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Query: 408 KKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYA 466
+ V D R + + G ++ A LL ++ G T + Y S++ A
Sbjct: 576 YSM--KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 467 KAGKM 471
K ++
Sbjct: 634 KIDRL 638
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/433 (17%), Positives = 177/433 (40%), Gaps = 42/433 (9%)
Query: 77 IVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLISKIRGLSSAENFFENLPDK 136
++ LR+LK A+E W E + ++ Y L ++++ R + + +
Sbjct: 68 VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127
Query: 137 MRGP--DTCSALLHSYVQNKKSAEAE---------------------------------- 160
GP +TC ++ V+ K E
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 161 -ALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAA 218
L ++M E G+ + ++ + G++D +L E+K ++ D+V YN+ + +
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 219 CASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKN 278
+ A K F E++ + PD ++Y+++ + K ++A + +EK
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 279 RVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYD 338
AY++++ Y + G DE + ++ + + + Y C+++ L K+G+ ++A +++
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 339 EWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKG 398
E + + NIL+ +L+ A + + G+ P T ++ K
Sbjct: 368 EMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426
Query: 399 QMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEI 457
++++ F++ + PD + + L + G +D A + + ++ ++ +
Sbjct: 427 KLDEACAMFEEM--DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484
Query: 458 YNSLLRTYAKAGK 470
Y SL++ + G+
Sbjct: 485 YTSLIKNFFNHGR 497
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 147/375 (39%), Gaps = 63/375 (16%)
Query: 44 RLLSLVYAKRSAAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDI 103
R S+VY KE+GH ++K +N+ D+
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ---------------------NCSPDL 517
Query: 104 KLVSGDYAVHLDLISKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEA 161
+L++ ++D + K FE + + PD + S L+H ++ + E
Sbjct: 518 QLLN----TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 162 LMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACA 220
L M E G + YN +++ + G+++K Q+L+E+K K P VVTY + A
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 221 SQNDKETAEKAFLELKKTKIDPDWISYSTLT--------------------------SLY 254
+ + A F E K +I+ + + YS+L +LY
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 255 ---------IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 305
+K E +A + M++ C N+V Y L++ + ++ W++M
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Query: 306 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 365
K + YT +IS L K G +A ++D +++ G D N ++ N N+
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813
Query: 366 EMAESFYNRLVTKGI 380
A S + +G+
Sbjct: 814 MDAFSLFEETRRRGL 828
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 133/300 (44%), Gaps = 3/300 (1%)
Query: 112 VHLDLISKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSEC 169
+ +D + K + L A FE + K+ PD T +L+ + + +A + EKM +
Sbjct: 417 IMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDS 476
Query: 170 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETA 228
+ Y ++ + ++G+ + ++ +++ +N SPD+ N ++ + E
Sbjct: 477 DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKG 536
Query: 229 EKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSL 288
F E+K + PD SYS L IK + M+++ C + AY+ ++
Sbjct: 537 RAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG 596
Query: 289 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 348
+ G ++ ++ ++M + + Y VI L K+ ++A +++E +S +
Sbjct: 597 FCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 349 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 408
+ + L+ + +++ A L+ KG+ P TW L +K ++ + L CF+
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQ 716
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/343 (19%), Positives = 134/343 (39%), Gaps = 11/343 (3%)
Query: 174 CPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAF 232
CP YN +L + D + Q+L E+ P V T + C N
Sbjct: 97 CPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVV 156
Query: 233 LELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNM 292
++K K P + +Y+TL + + + T ++M++ +++L+ +
Sbjct: 157 QMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKE 216
Query: 293 GYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP 352
G D L + +M S + Y I S K+G+ + A + E E+ D
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276
Query: 353 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF--KKA 410
++ N+L+ A + L PC + + GY G+ ++ ++A
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 411 IGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGK 470
GS+ + + ++T L + G +D A + ++ + YN L+ +AGK
Sbjct: 337 KGSIPSVIAYNCILTC----LRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGK 392
Query: 471 M--PLIIVERMQKDNVQMDAETQKVL--KITSEMPVSEVSSIF 509
+ + + MQK + + T ++ ++ + E ++F
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
>sp|Q9LS88|PP250_ARATH Pentatricopeptide repeat-containing protein At3g23020
OS=Arabidopsis thaliana GN=At3g23020 PE=2 SV=1
Length = 842
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 168/406 (41%), Gaps = 54/406 (13%)
Query: 111 AVHLDLISKIRGLSSAENFF------ENLPDK--MRGPDTCSALLHSYVQNKKSAEAEAL 162
+ L + K R AE FF EN D T + ++ +Y ++ + EA
Sbjct: 261 GIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASET 320
Query: 163 MEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQ 222
++M E G + + +N M+++Y +NGQL +V +++ +K + +PD TYN+ ++
Sbjct: 321 FKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKN 380
Query: 223 NDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAY 282
ND E A F E+K + PD +SY TL + + E+A + EM+ +
Sbjct: 381 NDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQ 440
Query: 283 SSLLSLYTNMGYKDEVLR---IWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 339
S+L +Y + E+L W K + M+ Y+ I + + G +AE ++
Sbjct: 441 SALTRMYV----EAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFIC 496
Query: 340 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW------- 392
+ ++ N+++ AY E A + +++ G+ P T+ L
Sbjct: 497 CQEVNKRTVIEY-NVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADM 555
Query: 393 ----------------------------GYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 424
++K GQ+ E +K+ + PD +
Sbjct: 556 PHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVE--YNIEPDVVVY 613
Query: 425 TAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAG 469
N + G++ A + ++ AG ++ IYNSL++ Y K G
Sbjct: 614 GVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVG 659
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 146/317 (46%), Gaps = 17/317 (5%)
Query: 109 DYAVHLDLISKIRGLSSAENFFENLPDKMRGPDTCSALLHSYVQNKKSAE----AEALME 164
+Y V + + A FE++ PD C+ ++ VQ SA+ +E
Sbjct: 507 EYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCT--YNTLVQILASADMPHKGRCYLE 564
Query: 165 KMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQN 223
KM E G++ +PY +++ ++ GQL+ ++ +E+ + N PDVV Y + + A A
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 224 DKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRV--A 281
+ + A +K+ I + + Y++L LY K+ ++A +++ ++C K +
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKL-LQSCNKTQYPDV 683
Query: 282 YSS--LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 339
Y+S +++LY+ + I+ M + N+ + ++ K G FE+A I +
Sbjct: 684 YTSNCMINLYSERSMVRKAEAIFDSMKQR-GEANEFTFAMMLCMYKKNGRFEEATQIAKQ 742
Query: 340 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 399
+ DP N +L + + + A + +V+ GI+P +T++ L +K G
Sbjct: 743 MREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGM 802
Query: 400 MEKVLECFKKAIGSVRK 416
+K + + I +RK
Sbjct: 803 SKKAV----RKIEEIRK 815
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 115/298 (38%), Gaps = 42/298 (14%)
Query: 178 YNHMLNLYISNGQLDKVPQML---QELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLE 234
Y+ ++ Y G L + ++ QE+ K T V+ YN+ + A E A + F
Sbjct: 474 YSANIDAYGERGYLSEAERVFICCQEVNKRT---VIEYNVMIKAYGISKSCEKACELFES 530
Query: 235 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 294
+ + PD +Y+TL + ++P K L++M + + + Y +++S
Sbjct: 531 MMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVIS------- 583
Query: 295 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 354
S VKLG+ AE +Y E + D V +
Sbjct: 584 ----------------------------SFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGV 615
Query: 355 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSV 414
L+ A+ + ++ A S+ + GI + L Y K G +++ ++K + S
Sbjct: 616 LINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSC 675
Query: 415 RK-WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAGKM 471
K PD N E+ + AE + +++ G + + +L Y K G+
Sbjct: 676 NKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRF 733
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 94/235 (40%), Gaps = 12/235 (5%)
Query: 269 EMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLG 328
EM ++ + Y +L+ +Y+ G K L KM + + ++ V+ K
Sbjct: 212 EMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAR 271
Query: 329 EFEKAENIYDEWESISGTGDPRVP------NILLAAYINRNQLEMAESFYNRLVTKGIKP 382
EF+KAE + +W D V N ++ Y Q++ A + R++ +GI P
Sbjct: 272 EFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVP 331
Query: 383 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 442
T+ + Y GQ+ +V K PD R + + DI+ A
Sbjct: 332 TTVTFNTMIHIYGNNGQLGEVTSLMKTM---KLHCAPDTRTYNILISLHTKNNDIERAGA 388
Query: 443 LLVTLRNAGHVSTEI-YNSLLRTYAKAGKMPLI--IVERMQKDNVQMDAETQKVL 494
+++ G + Y +LL ++ + ++ M DNV++D TQ L
Sbjct: 389 YFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSAL 443
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 120/276 (43%), Gaps = 6/276 (2%)
Query: 59 MRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLIS 118
+ K +E G+ ++ KL + A EV + M ++Y+I+ Y V ++ +
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM-VEYNIEPDVVVYGVLINAFA 621
Query: 119 KIRGLSSAENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKM-SECGFLKCP 175
+ A ++ E + + ++ ++L+ Y + EAEA+ K+ C + P
Sbjct: 622 DTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYP 681
Query: 176 LPY--NHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFL 233
Y N M+NLY + K + +K+ + T+ + L E A +
Sbjct: 682 DVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAK 741
Query: 234 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 293
++++ KI D +SY+++ L+ ++A T KEM + + + SL ++ +G
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLG 801
Query: 294 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGE 329
+ +R +++ K + +SSLV +G+
Sbjct: 802 MSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIGD 837
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 193/430 (44%), Gaps = 27/430 (6%)
Query: 73 ELNRIVRELRKLKRYKHALEVCEWMELQ---YDIKLVSGDYAVHLDLISKIRGLSSAENF 129
+ +R+ + + K+Y L++C+ MEL+ +++ +S + ++ + R LS A +
Sbjct: 74 DFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS----IMINCCCRCRKLSLAFSA 129
Query: 130 FENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYIS 187
+ PDT S L++ + +EA L+++M E G + N ++N
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 188 NGQL-DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 246
NG++ D V + + ++ P+ VTY L A + ++++ KI D +
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 247 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 306
YS + K + A EME + + + + Y++L+ + G D+ ++ + M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 307 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 366
+ ++ +I VK G+ +AE ++ E + D L+ + NQL+
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 367 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 426
A + +V+KG P T+ +L GY K ++ LE F+K S+R V D T
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM--SLRGVVAD----TV 423
Query: 427 AYNKL----EEQGDIDGAEHL---LVTLRNAGHVSTEIYNSLLRTYAKAG--KMPLIIVE 477
YN L E G ++ A+ L +V+ R + + Y LL G + L I E
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS--YKILLDGLCDNGEPEKALEIFE 481
Query: 478 RMQKDNVQMD 487
+++K +++D
Sbjct: 482 KIEKSKMELD 491
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 162/359 (45%), Gaps = 4/359 (1%)
Query: 54 SAAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVH 113
A + + + E G ++ +++ + K + A+E+ ME + IKL + Y++
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME-ERKIKLDAVKYSII 253
Query: 114 LDLISKIRGLSSAENFFENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGF 171
+D + K L +A N F + K D + L+ + + + L+ M +
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 172 LKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEK 230
+ ++ +++ ++ G+L + ++ +E+ ++ SPD VTY + +N + A
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 231 AFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYT 290
+ P+ +++ L + Y K L + ++M R + V Y++L+ +
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 291 NMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPR 350
+G + ++++M+S + + Y ++ L GE EKA I+++ E D
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 351 VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 409
+ NI++ N ++++ A + L KG+KP T+ ++ G KKG + + F+K
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 147/332 (44%), Gaps = 4/332 (1%)
Query: 142 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 201
T +AL++ N K ++A L+++M E GF + Y +L + +GQ ++L+++
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 202 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 260
+ + D V Y++ + + A F E++ D I Y+TL +
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 261 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 320
+ A L++M KR + VA+S+L+ + G E + K+M+ + YT +
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 321 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 380
I K + +KA ++ D S + R NIL+ Y N ++ + ++ +G+
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 381 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 440
T+ L G+ + G++E E F++ + R+ PD + L + G+ + A
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVS--RRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 441 EHLLVTL-RNAGHVSTEIYNSLLRTYAKAGKM 471
+ + ++ + IYN ++ A K+
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 165/368 (44%), Gaps = 22/368 (5%)
Query: 73 ELNRIVRELRKLKRYKHALEVCEWME---LQYDIKLVSGDYAVHLDLISKIRGLSSAENF 129
+ NR+ + K K+Y+ L +C+ ME + + I +S + ++ + R LS A
Sbjct: 90 DFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS----IMINCFCRCRKLSYA--- 142
Query: 130 FENLPDKMR---GPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNL 184
F + M+ PDT + LL+ + +EA L+++M E G + N ++N
Sbjct: 143 FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNG 202
Query: 185 YISNGQL-DKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPD 243
NG++ D V + + ++ P+ VTY L A + ++++ I D
Sbjct: 203 LCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
Query: 244 WISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWK 303
+ YS + K + A EME + + + + Y++L+ + N G D+ ++ +
Sbjct: 263 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
Query: 304 KMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRN 363
M+ N ++ +I S VK G+ +A+ + E + N L+ + N
Sbjct: 323 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 382
Query: 364 QLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 423
+LE A + +++KG P T+ +L GY K +++ LE F++ S+R + +
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM--SLRGVIAN--- 437
Query: 424 ITAAYNKL 431
T YN L
Sbjct: 438 -TVTYNTL 444
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 135/302 (44%), Gaps = 7/302 (2%)
Query: 142 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 201
T + L++ N K ++A L+++M E GF + Y +LN+ +GQ ++L+++
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 202 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 260
+ +N D V Y++ + + A F E++ D I+Y+TL +
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 261 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 320
+ A L++M KR N V +S L+ + G E ++ K+MM N Y +
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 321 ISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYNRLVTK 378
I K E+A + D IS DP + NIL+ Y N+++ + + +
Sbjct: 375 IDGFCKENRLEEAIQMVDLM--ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432
Query: 379 GIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDID 438
G+ T+ L G+ + G++E + F++ + R+ PD + L + G+++
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS--RRVRPDIVSYKILLDGLCDNGELE 490
Query: 439 GA 440
A
Sbjct: 491 KA 492
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/444 (18%), Positives = 181/444 (40%), Gaps = 40/444 (9%)
Query: 55 AAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHL 114
A + + + E G ++ ++ + K + A+E+ ME + +IKL + Y++ +
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYSIII 270
Query: 115 DLISKIRGLSSAENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKC 174
D + K L +A N F + K GF
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIK---------------------------------GFKAD 297
Query: 175 PLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFL 233
+ YN ++ + + G+ D ++L+++ K+ SP+VVT+++ + + + A++
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 234 ELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMG 293
E+ + I P+ I+Y++L + K E+A + M + C + + ++ L++ Y
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417
Query: 294 YKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPN 353
D+ L ++++M N Y ++ + G+ E A+ ++ E S D
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 354 ILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGS 413
ILL + +LE A + ++ ++ + ++ G +++ + F
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL--P 535
Query: 414 VRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKMP 472
++ D R ++L + + A+ L + GH E+ YN L+R +
Sbjct: 536 LKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDAT 595
Query: 473 LI--IVERMQKDNVQMDAETQKVL 494
++E M+ D T K++
Sbjct: 596 TAAELIEEMKSSGFPADVSTVKMV 619
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 190/430 (44%), Gaps = 27/430 (6%)
Query: 73 ELNRIVRELRKLKRYKHALEVCEWMELQ---YDIKLVSGDYAVHLDLISKIRGLSSAENF 129
+ +R+ + K K+Y L +C+ MEL+ +++ +S + ++ + R L A +
Sbjct: 90 DFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS----IMINCFCRCRKLCLAFSA 145
Query: 130 FENLPDKMRGPDTC--SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLN-LYI 186
+ P+T S L++ + +EA L+++M E G + N ++N L +
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 187 SNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWIS 246
S + + + + + ++ P+ VTY L A + ++++ I D +
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 247 YSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMM 306
YS + K + A EME + N + Y+ L+ + N G D+ ++ + M+
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 307 SLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLE 366
N ++ +I S VK G+ +AE ++ E D L+ + N L+
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 367 MAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITA 426
A + +V+KG P T+ +L GY K +++ LE F+K S+R V D T
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM--SLRGVVAD----TV 439
Query: 427 AYNKL----EEQGDIDGAEHL---LVTLRNAGHVSTEIYNSLLRTYAKAGKM--PLIIVE 477
YN L E G ++ A+ L +V+ + ++ T Y LL G+ L I E
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVT--YKILLDGLCDNGESEKALEIFE 497
Query: 478 RMQKDNVQMD 487
+++K +++D
Sbjct: 498 KIEKSKMELD 507
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 146/336 (43%), Gaps = 6/336 (1%)
Query: 140 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 197
PD T + L++ + K AEA L++KM E G + Y +LN+ +GQ ++
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 198 LQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 256
L+++ ++N D V Y++ + + A F E++ I + I+Y+ L +
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 257 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 316
+ A L++M KR N V +S L+ + G E + K+M+ +
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 317 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 376
YT +I K +KA + D S + R NIL+ Y N+++ + ++
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 377 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 436
+G+ T+ L G+ + G++ E F++ + RK P+ + L + G+
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS--RKVPPNIVTYKILLDGLCDNGE 488
Query: 437 IDGAEHLLVTL-RNAGHVSTEIYNSLLRTYAKAGKM 471
+ A + + ++ + IYN ++ A K+
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 155/359 (43%), Gaps = 10/359 (2%)
Query: 142 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 201
T +L+ ++ ++A A L+ KM E + Y+ +++ +G LD + E+
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 202 K-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 260
+ K + +++TYN+ + + + K ++ K KI+P+ +++S L ++K
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 261 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 320
+A KEM R + + Y+SL+ + + D+ ++ M+S N + +
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 321 ISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGI 380
I+ K + ++ + D N L+ + +L +A+ + +V++ +
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 381 KPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGA 440
P T+++L G G+ EK LE F+K S K D + + + +D A
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKS--KMELDIGIYNIIIHGMCNASKVDDA 527
Query: 441 EHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKMPL----IIVERMQKDNVQMDAETQKVL 494
L +L G + YN ++ K G PL ++ +M++D D T +L
Sbjct: 528 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKG--PLSEAELLFRKMEEDGHAPDGWTYNIL 584
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 36/255 (14%)
Query: 142 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 201
T S L+ S+V+ K EAE L ++M G + Y +++ + LDK QM+ +
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 202 -KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 260
K P++ T+N+ + N + + F ++ + D ++Y+TL + ++
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 261 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM--------------- 305
A +EM R N V Y LL + G ++ L I++K+
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 306 ---MSLFAKMNDA-----------------EYTCVISSLVKLGEFEKAENIYDEWESISG 345
M +K++DA Y +I L K G +AE ++ + E
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 346 TGDPRVPNILLAAYI 360
D NIL+ A++
Sbjct: 575 APDGWTYNILIRAHL 589
Score = 33.1 bits (74), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 90 ALEVCEWMELQYDIKLVSGDYAVHLDLISKIRGLSSAENFFENLPDKMRGPD--TCSALL 147
ALE+ E +E + ++L G Y + + + + A + F +LP K P T + ++
Sbjct: 492 ALEIFEKIE-KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 148 HSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 203
+ +EAE L KM E G YN ++ ++ +G K ++++ELK+
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 197/462 (42%), Gaps = 58/462 (12%)
Query: 58 TMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLI 117
T+ +++G + + N ++ L ++ R ALE+ ME +K + Y V +D
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME-SLGVKPTAYTYIVFIDYY 443
Query: 118 SKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCP 175
K SA FE + K P+ C+A L+S + + EA+ + + + G +
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 176 LPYNHMLNLYISNGQLDKVPQMLQELKKN-TSPDVVTYNLWLAACASQNDKETAEKAFLE 234
+ YN M+ Y G++D+ ++L E+ +N PDV+ N + + + A K F+
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 235 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 294
+K+ K+ P ++Y+TL + K ++A + M ++ C N + +++L
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK--- 620
Query: 295 KDEV---LRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFE-------------------- 331
DEV L++ KMM + + Y +I LVK G+ +
Sbjct: 621 NDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTL 680
Query: 332 --------KAENIYDEWESISG---TGDPRVPNI----LLAAYINRNQLEMAESFYNRLV 376
KA I D ++ I+ + N+ L+ + + ++ A SF RLV
Sbjct: 681 CTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLV 740
Query: 377 TKGIKPCYTTWELL------TWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNK 430
GI C +L + + + E F K +G V+ +P + L+
Sbjct: 741 ANGI--CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLG-VQPKLPTYNLLIGG--- 794
Query: 431 LEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLLRTYAKAGKM 471
L E I+ A+ + + +++ G + YN LL Y K+GK+
Sbjct: 795 LLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 7/267 (2%)
Query: 207 PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATT 266
P + TYNL + + E A+ FL++K T PD +Y+ L Y K ++
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 267 LKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMS--LFAKMNDAEYTCVISSL 324
KEM C N + ++ ++S G D+ L ++ +MS F+ Y +I L
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP-TACTYGPLIDGL 901
Query: 325 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 384
K G +A+ +++ + + NIL+ + + + A + + R+V +G++P
Sbjct: 902 SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961
Query: 385 TTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLL 444
T+ +L G++++ L FK+ S PD N L + ++ A L
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKES--GLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 445 VTLRNAGHVSTEI--YNSLLRTYAKAG 469
++ + ++ ++ YNSL+ AG
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAG 1046
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 97/500 (19%), Positives = 188/500 (37%), Gaps = 77/500 (15%)
Query: 46 LSLVYAKRSAAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQ----- 100
LS+ + A +RK +E G ++ Y N ++ L K + A+EV M L+
Sbjct: 163 LSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPS 222
Query: 101 --------------YDIKLVSG---------------DYAVHLDLISKIRGLSSAENFFE 131
DI V G + + + ++ + ++ A +
Sbjct: 223 LQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILK 282
Query: 132 NLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNG 189
+ D+ GPD T + L+ + +K A+ + EKM + Y +L+ + N
Sbjct: 283 RMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNR 342
Query: 190 QLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYS 248
LD V Q E++K+ PDVVT+ + + A + A ++ I P+ +Y+
Sbjct: 343 DLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYN 402
Query: 249 TLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL 308
TL +++ + A ME + Y + Y G L ++KM +
Sbjct: 403 TLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462
Query: 309 FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA 368
N + SL K G +A+ I+ + I D N+++ Y +++ A
Sbjct: 463 GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 522
Query: 369 ESFYNRLVTKG-----------------------------------IKPCYTTWELLTWG 393
+ ++ G +KP T+ L G
Sbjct: 523 IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 582
Query: 394 YLKKGQMEKVLECFKKAIGSVRKWVPDHRL-ITAAYNKLEEQGDIDGAEHLLVTLRNAGH 452
K G++++ +E F+ G V+K P + + ++ L + ++ A +L + + G
Sbjct: 583 LGKNGKIQEAIELFE---GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639
Query: 453 VSTEI-YNSLLRTYAKAGKM 471
V YN+++ K G++
Sbjct: 640 VPDVFTYNTIIFGLVKNGQV 659
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 143/333 (42%), Gaps = 13/333 (3%)
Query: 79 RELRKLKRYKHALEVCEWMELQYDIKLVSG-DYAVHLDLISKIRGLSSAENFFENLPDKM 137
R+L +K++ W E++ D + + + +D + K A + + + D+
Sbjct: 342 RDLDSVKQF--------WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 138 RGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVP 195
P+ T + L+ ++ + +A L M G Y ++ Y +G
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 196 QMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLY 254
+ +++K K +P++V N L + A A++ F LK + PD ++Y+ + Y
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Query: 255 IKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMND 314
K+ ++A L EM + C + + +SL++ DE +++ +M + K
Sbjct: 514 SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 573
Query: 315 AEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNR 374
Y +++ L K G+ ++A +++ + N L +++ +A +
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK 633
Query: 375 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF 407
++ G P T+ + +G +K GQ+++ + CF
Sbjct: 634 MMDMGCVPDVFTYNTIIFGLVKNGQVKEAM-CF 665
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 12/252 (4%)
Query: 236 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 295
K + P +Y+ L ++ ++ E A +++ C + Y+ LL Y G
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 296 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES---ISGTGDPRVP 352
DE+ ++K+M + + N + VIS LVK G + A ++Y + S S T P
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896
Query: 353 NILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIG 412
L+ +L A+ + ++ G +P + +L G+ K G+ + FK+ +
Sbjct: 897 --LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVK 954
Query: 413 -SVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 470
VR PD + + + L G +D H L+ +G + YN ++ K+ +
Sbjct: 955 EGVR---PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 471 M--PLIIVERMQ 480
+ L++ M+
Sbjct: 1012 LEEALVLFNEMK 1023
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 151/367 (41%), Gaps = 13/367 (3%)
Query: 115 DLISKI---RGLSSAENFFENLPDKMRGPDTCSALL----HSYVQNKKSAEAEALMEKMS 167
DLI I G+ +A +F E L D S L+ +S N S A L EK +
Sbjct: 718 DLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSG-ARTLFEKFT 776
Query: 168 ECGFLKCPLP-YNHMLNLYISNGQLDKVPQMLQELKKNTS-PDVVTYNLWLAACASQNDK 225
+ ++ LP YN ++ + ++ + ++K PDV TYN L A
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 226 ETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKE-MEKRTCRKNRVAYSS 284
+ + + E+ + + + I+++ + S +K + A + M R Y
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896
Query: 285 LLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESIS 344
L+ + G E ++++ M+ + N A Y +I+ K GE + A ++
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 345 GTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVL 404
D + ++L+ +++ ++ L G+ P + L+ G K ++E+ L
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 405 ECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLR 463
F + + + R PD + L G ++ A + ++ AG + +N+L+R
Sbjct: 1017 VLFNE-MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075
Query: 464 TYAKAGK 470
Y+ +GK
Sbjct: 1076 GYSLSGK 1082
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 114/277 (41%), Gaps = 5/277 (1%)
Query: 140 PD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQM 197
PD T + LL +Y ++ K E L ++MS + +N +++ + G +D +
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 198 LQEL--KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYI 255
+L ++ SP TY + + A++ F + P+ Y+ L + +
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 256 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 315
K + A K M K R + YS L+ +G DE L +K++ +
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 316 EYTCVISSLVKLGEFEKAENIYDEWESISG-TGDPRVPNILLAAYINRNQLEMAESFYNR 374
Y +I+ L K E+A +++E ++ G T D N L+ +E A YN
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNE 1057
Query: 375 LVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI 411
+ G++P T+ L GY G+ E ++ +
Sbjct: 1058 IQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1094
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 113/282 (40%), Gaps = 46/282 (16%)
Query: 120 IRGLSSAEN-------FFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSECG 170
I GL A N +++ + D+ P C+ L+ ++ + EA+ L E M + G
Sbjct: 862 ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 171 FLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAE 229
YN ++N + G+ D + + + K+ PD+ TY++ + +
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 230 KAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEME-KRTCRKNRVAYSSLLSL 288
F ELK++ ++PD + Y+ + + K E+A EM+ R + Y+SL+
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI-- 1039
Query: 289 YTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGD 348
N+G I+ +V E+A IY+E + +
Sbjct: 1040 -LNLG---------------------------IAGMV-----EEAGKIYNEIQRAGLEPN 1066
Query: 349 PRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELL 390
N L+ Y + E A + Y +VT G P T+E L
Sbjct: 1067 VFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 5/213 (2%)
Query: 77 IVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLISKIRGLSSAENFFENLPDK 136
++ L K R A ++ E M L Y + Y + ++ K +A F+ + +
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGM-LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 137 MRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKV 194
PD T S L+ + E +++ E G + YN ++N + +L++
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 195 PQMLQELK--KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 252
+ E+K + +PD+ TYN + E A K + E+++ ++P+ +++ L
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075
Query: 253 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL 285
Y PE A + M N Y L
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 160/358 (44%), Gaps = 4/358 (1%)
Query: 55 AAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHL 114
A + + + E G + ++ L K AL++ ME + +IK Y++ +
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKME-ERNIKASVVQYSIVI 252
Query: 115 DLISKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFL 172
D + K A + F + K D T S+L+ + K + ++ +M +
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 173 KCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKA 231
+ ++ ++++++ G+L + ++ E+ + +PD +TYN + +N A +
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 232 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 291
F + +PD ++YS L + Y K + + +E+ + N + Y++L+ +
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 292 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 351
G + ++++M+S + Y ++ L GE KA I+++ + T +
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 352 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKK 409
NI++ N ++++ A S + L KG+KP T+ ++ G KKG + + F+K
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 183/424 (43%), Gaps = 27/424 (6%)
Query: 73 ELNRIVRELRKLKRYKHALEVCEWMELQ------YDIKLVSGDYAVHLDLISKIRGLSSA 126
+ NR+ + + K+Y L C+ MEL Y + ++ Y L+ L A
Sbjct: 72 DFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRA 131
Query: 127 ENF-FENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 185
+E PD + T S L++ + + +EA AL+++M E + + ++N
Sbjct: 132 WKLGYE--PDTI----TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL 185
Query: 186 ISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDW 244
G++ + ++ + + PD VTY L + A F ++++ I
Sbjct: 186 CLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV 245
Query: 245 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKK 304
+ YS + K + A + EME + + + V YSSL+ N G D+ ++ ++
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 305
Query: 305 MMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQ 364
M+ + ++ +I VK G+ +A+ +Y+E + D N L+ + N
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 365 LEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLI 424
L A ++ +V+KG +P T+ +L Y K +++ + F++ S + +P+
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI--SSKGLIPN---- 419
Query: 425 TAAYNKLE----EQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVE 477
T YN L + G ++ A+ L + + G S Y LL G++ L I E
Sbjct: 420 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 479
Query: 478 RMQK 481
+MQK
Sbjct: 480 KMQK 483
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 85/215 (39%), Gaps = 38/215 (17%)
Query: 110 YAVHLDLISKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMS 167
Y +D K L A F+ + K PD T S L++SY + K+ + L ++S
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 168 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKE 226
G + + YN ++ + +G+L+ ++ QE+ + P VVTY + L +
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 227 TAEKAFLELKKTK-----------------------------------IDPDWISYSTLT 251
A + F +++K++ + PD ++Y+ +
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 252 SLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 286
K +A ++M++ C + Y+ L+
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
>sp|Q9FLD8|PP408_ARATH Pentatricopeptide repeat-containing protein At5g39980,
chloroplastic OS=Arabidopsis thaliana GN=At5g39980 PE=2
SV=1
Length = 678
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 152/314 (48%), Gaps = 10/314 (3%)
Query: 106 VSGDYAVHLDLISKIRGL---SSAENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAE 160
VSGD ++ +LI R L S A + F L PD + ++++ Y + K EA
Sbjct: 221 VSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREAR 280
Query: 161 ALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK-NTSPDVVTYNLWLAAC 219
L+++M+E G L + Y+ +L++Y+ N + + + E+K+ N + D+ T N+ +
Sbjct: 281 LLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVY 340
Query: 220 ASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNR 279
+ + A++ F L+K I+P+ +SY+T+ +Y + EL +A + M+++ +N
Sbjct: 341 GQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNV 400
Query: 280 VAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 339
V Y++++ +Y ++ + ++M S + N Y+ +IS K G+ ++A ++ +
Sbjct: 401 VTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQK 460
Query: 340 WESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQ 399
S D + ++ AY + A+ + L P T +L K G+
Sbjct: 461 LRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILA----KAGR 516
Query: 400 MEKVLECFKKAIGS 413
E+ F++A S
Sbjct: 517 TEEATWVFRQAFES 530
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 122/298 (40%), Gaps = 34/298 (11%)
Query: 112 VHLDLISKIRGLSSAENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSEC 169
+ +D+ ++ + A+ F +L P+ S +L Y + + EA L M
Sbjct: 335 IMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK 394
Query: 170 GFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETA 228
+ + YN M+ +Y + +K ++QE++ + P+ +TY+ ++ + A
Sbjct: 395 DIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRA 454
Query: 229 EKAFLELKKTKIDPDWISYSTLTSLYIKMEL-----------------PEKAATTLKEME 271
F +L+ + ++ D + Y T+ Y ++ L P + A T+
Sbjct: 455 ATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKA 514
Query: 272 KRTCR--------------KNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEY 317
RT K+ + +++LY+ V+ +++KM + +
Sbjct: 515 GRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVI 574
Query: 318 TCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRL 375
V+++ K EFEKA+ +Y E + V +L+ Y ++ EM ES + RL
Sbjct: 575 AMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRL 632
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/325 (18%), Positives = 144/325 (44%), Gaps = 8/325 (2%)
Query: 168 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKE 226
E + YN +L + Q D + E+++ +PD TY+ + + + +
Sbjct: 148 EAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFD 207
Query: 227 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLL 286
+A ++++ ++ D + YS L L ++ KA + +++ + VAY+S++
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 287 SLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGT 346
++Y E + K+M N Y+ ++S V+ +F +A +++ E + ++
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 347 GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLEC 406
D NI++ Y + ++ A+ + L I+P ++ + Y + + +
Sbjct: 328 LDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHL 387
Query: 407 FK-KAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRT 464
F+ + + V + + Y K E + A +L+ +++ G I Y++++
Sbjct: 388 FRLMQRKDIEQNVVTYNTMIKIYGKTMEH---EKATNLVQEMQSRGIEPNAITYSTIISI 444
Query: 465 YAKAGKM--PLIIVERMQKDNVQMD 487
+ KAGK+ + ++++ V++D
Sbjct: 445 WGKAGKLDRAATLFQKLRSSGVEID 469
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 94/237 (39%), Gaps = 9/237 (3%)
Query: 236 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 295
++ K P +Y+ + ++ + + A EM +R +R YS+L++ + G
Sbjct: 147 EEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMF 206
Query: 296 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 355
D L +KM + Y+ +I +L ++ KA +I+ + T D N +
Sbjct: 207 DSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSM 266
Query: 356 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 415
+ Y A + G+ P ++ L Y++ + + L F +
Sbjct: 267 INVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEM----- 321
Query: 416 KWVPDHRLITAAYNKLEEQGDID---GAEHLLVTLRNAGHVSTEI-YNSLLRTYAKA 468
K V +T ++ G +D A+ L +LR + YN++LR Y +A
Sbjct: 322 KEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEA 378
>sp|Q9C545|PPR72_ARATH Putative pentatricopeptide repeat-containing protein At1g43010
OS=Arabidopsis thaliana GN=At1g43010 PE=3 SV=1
Length = 257
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 4/171 (2%)
Query: 36 GGRDTLGRRLLSLVYAKRSAAITMRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCE 95
TL R+ + + K S + +W+++G+ V+ L +++ L K + ALE +
Sbjct: 33 AANQTLPSRIKTDINQKASIIPLLEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALEASK 92
Query: 96 WMELQYDIKLVSGDYAVHLDLISKIRGLSSAENFFENLPDKMRGPDTCSALLHSYVQNKK 155
WM D A L L++ + GL AE F+N+P+KMR S LL SY + +
Sbjct: 93 WMFKHSVFDNFPEDCAAQLHLVNTVLGLEEAEKMFKNIPEKMRD---YSVLLSSYTKPVR 149
Query: 156 SAE-AEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKNT 205
+ + AEA +KM E GFL P +N M+ LY +LD V ++L +LKKN
Sbjct: 150 TVDKAEATFKKMRELGFLLKPYLFNSMICLYGQLQRLDMVEKLLYKLKKNN 200
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 143/339 (42%), Gaps = 56/339 (16%)
Query: 178 YNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 236
YN +LN G +D++ Q+ E L+ P++ TYN + + E A + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 237 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 296
+ +DPD+ +Y++L Y + + + A EM + CR+N VAY+ L+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC------ 299
Query: 297 EVLRIWKKMMSLFAKMNDAE-------YTCVISSLVKLGEFEKAENIYDEWESISGTGDP 349
V R + M LF KM D E YT +I SL +A N+ E E +
Sbjct: 300 -VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 350 RVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK- 408
+L+ + ++ + E A +++ KG+ P T+ L GY K+G +E ++ +
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 409 --------------------------KAIGSV-----RKWVPDHRLITAAYNKLEE---- 433
KA+G + RK +PD YN L +
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPD----VVTYNSLIDGQCR 474
Query: 434 QGDIDGAEHLLVTLRNAGHVSTE-IYNSLLRTYAKAGKM 471
G+ D A LL + + G V + Y S++ + K+ ++
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 143/370 (38%), Gaps = 23/370 (6%)
Query: 64 EEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLISKIRGL 123
+ G ++ ++ L K KR + A ++ + +E Q + Y +D K +
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE-QKGVNPNVVMYTALIDGYCKAGKV 548
Query: 124 SSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHM 181
A E + K P+ T +AL+H + K EA L EKM + G +
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 182 LNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKI 240
++ + +G D Q+ L T PD TY ++ + AE ++++ +
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 241 DPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSL--------------- 285
PD +YS+L Y + A LK M C ++ + SL
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728
Query: 286 ---LSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWES 342
L +NM D V+ + +KM+ N Y +I + ++G AE ++D +
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR 788
Query: 343 ISGTGDPR-VPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQME 401
G V N LL+ + A + ++ G P + ++L G KKG+ E
Sbjct: 789 NEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKE 848
Query: 402 KVLECFKKAI 411
+ F+ +
Sbjct: 849 RGTSVFQNLL 858
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 152/355 (42%), Gaps = 11/355 (3%)
Query: 142 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 201
T + L+ S K +A L+ +M E G + + YN ++N Y G ++ +++ +
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 202 K-KNTSPDVVTYN-LWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMEL 259
+ + SP+ TYN L C S K A ++ + K+ PD ++Y++L +
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSNVHK--AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 260 PEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTC 319
+ A L M R ++ Y+S++ +E ++ + N YT
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 320 VISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKG 379
+I K G+ ++A + ++ S + + N L+ +L+ A ++V G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 380 IKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDG 439
++P +T +L LK G + F++ + S K PD T +G +
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK--PDAHTYTTFIQTYCREGRLLD 655
Query: 440 AEHLLVTLRNAGHVSTEI--YNSLLRTYAKAGK--MPLIIVERMQKDNVQMDAET 490
AE ++ +R G VS ++ Y+SL++ Y G+ +++RM+ + T
Sbjct: 656 AEDMMAKMRENG-VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 709
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 141/335 (42%), Gaps = 5/335 (1%)
Query: 68 TVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLISKIRGLSSAE 127
TV Y + +++ L +R AL + + ME + IK Y V +D + A
Sbjct: 322 TVRTYTV--LIKSLCGSERKSEALNLVKEME-ETGIKPNIHTYTVLIDSLCSQCKFEKAR 378
Query: 128 NFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLY 185
+ +K P+ T +AL++ Y + +A ++E M YN ++ Y
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 186 ISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWI 245
+ + + + L++ PDVVTYN + + ++A + + + PD
Sbjct: 439 CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 246 SYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 305
+Y+++ K + E+A +E++ N V Y++L+ Y G DE + +KM
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 306 MSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQL 365
+S N + +I L G+ ++A + ++ I IL+ +
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 366 EMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM 400
+ A S + ++++ G KP T+ Y ++G++
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 175/410 (42%), Gaps = 23/410 (5%)
Query: 89 HALEVC------EWMELQYDIKLVSGDYAVHLDLISKIRGLSS--AENFFENLPDKMRGP 140
+ L++C E EL+Y KL+ G Y L+ +++ GL + + E L DK+ P
Sbjct: 161 YVLDLCRKMNKDERFELKY--KLIIGCYNTLLNSLARF-GLVDEMKQVYMEMLEDKV-CP 216
Query: 141 D--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQML 198
+ T + +++ Y + EA + K+ E G Y ++ Y LD ++
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 199 QE--LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIK 256
E LK +V +L C ++ E A F+++K + P +Y+ L
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDE-AMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 257 MELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAE 316
E +A +KEME+ + N Y+ L+ + ++ + +M+ N
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 317 YTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLV 376
Y +I+ K G E A ++ + ES + + R N L+ Y N + A N+++
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML 454
Query: 377 TKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGD 436
+ + P T+ L G + G + ++ + R VPD T+ + L +
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL--SLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 437 IDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGKM--PLIIVERMQKDN 483
++ A L +L G + + +Y +L+ Y KAGK+ +++E+M N
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 47/287 (16%)
Query: 245 ISYSTLTSLYIKMELPEKAATTLKEMEKRTCR-KNRV-AYSSLLSLYTNMGYKDEVLRIW 302
IS S ++SL+ ++L K A + R K+ V +Y+SLL+L N GY V +I
Sbjct: 88 ISPSHVSSLF-SLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIR 146
Query: 303 KKM-------------MSLFAKMNDAE------------YTCVISSLVKLGEFEKAENIY 337
M + L KMN E Y +++SL + G ++ + +Y
Sbjct: 147 LLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVY 206
Query: 338 DEWESISGTGDPRVPNI-----LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTW 392
E D PNI ++ Y +E A + +++V G+ P + T+ L
Sbjct: 207 MEM-----LEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIM 261
Query: 393 GYLKKGQMEKVLECFKKAI--GSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNA 450
GY ++ ++ + F + G R V LI + L ID A L V +++
Sbjct: 262 GYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI----HGLCVARRIDEAMDLFVKMKDD 317
Query: 451 GHVST-EIYNSLLRTYAKAGKM--PLIIVERMQKDNVQMDAETQKVL 494
T Y L+++ + + L +V+ M++ ++ + T VL
Sbjct: 318 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 152/363 (41%), Gaps = 10/363 (2%)
Query: 73 ELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLISKIRGLSSAENFFEN 132
+ R++ L+RY+ + + MEL Y I + + + + LS A +
Sbjct: 73 DFTRLLTATANLRRYETVIYFSQKMEL-YGISHDLYSFTILIHCFCRCSRLSFALSVLGK 131
Query: 133 LPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQ 190
+ P T +LLH + + +A +L+ M + G+ + YN +++ NG+
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGE 191
Query: 191 LDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYST 249
L+ ++L E+ KK DVVTYN L A + ++ K I+PD ++++
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251
Query: 250 LTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLF 309
L +++K ++A KEM + + N V Y+S+++ G + + + M S
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 310 AKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAE 369
N Y +IS K ++ ++ D N L+ Y +L +A
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 370 SFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECF------KKAIGSVRKWVPDHRL 423
+ +V++ + P T +L G G++E L F +K IG V + H L
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431
Query: 424 ITA 426
A
Sbjct: 432 CKA 434
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 148/331 (44%), Gaps = 3/331 (0%)
Query: 144 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 203
+ L+ +++QN + +A ++++M E G YN ++ ++D+ L E+ +
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 204 NT-SPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 262
N P+ TY +++ ++ +A+K E+++ + P+ + + L + Y K +
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 263 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 322
A + + M + + Y+ L++ D+ I+++M + Y +I+
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 323 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 382
KLG +KA +I+DE T + + N+LL + ++E A+ + + KG+ P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 383 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 442
T+ + GY K G + + F + ++ VPD + T + D++ A
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEM--KLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753
Query: 443 LLVTLRNAGHVSTEIYNSLLRTYAKAGKMPL 473
+ T + ST +N+L+ K GK L
Sbjct: 754 IFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 172/403 (42%), Gaps = 14/403 (3%)
Query: 77 IVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLI---SKIRGLSSAENFFENL 133
+++ + R+ A+ V + M+ Q ++ D + LI SK + + A +F +
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQG----IAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 134 PDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQL 191
+ P+ T A + Y++ + A A+ +++M ECG L + ++N Y G++
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573
Query: 192 DKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTL 250
+ + + + D TY + + + + AE+ F E++ I PD SY L
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633
Query: 251 TSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFA 310
+ + K+ +KA++ EM + N + Y+ LL + G ++ + +M
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Query: 311 KMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAES 370
N Y +I K G+ +A ++DE + D V L+ N +E A +
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753
Query: 371 FYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAI-GSVRKWV-PDHRLITAAY 428
+ KG + L K G+ E E + + GS ++ P+
Sbjct: 754 IFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812
Query: 429 NKLEEQGDIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGK 470
+ L ++G+++ A+ L ++NA + T I Y SLL Y K G+
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGR 855
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 125/287 (43%), Gaps = 4/287 (1%)
Query: 178 YNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELK 236
Y ++ ++ N + ++L+E+K + +PD+ YN + + + A +E+
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 237 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 296
+ + P+ +Y S YI+ A +KEM + N+V + L++ Y G
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 297 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILL 356
E ++ M+ + YT +++ L K + + AE I+ E D +L+
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 357 AAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRK 416
+ ++ A S ++ +V +G+ P + +L G+ + G++EK E + SV+
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM--SVKG 692
Query: 417 WVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAGHV-STEIYNSLL 462
P+ + + GD+ A L ++ G V + +Y +L+
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 137/330 (41%), Gaps = 4/330 (1%)
Query: 144 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-K 202
++L+ Y + K + L+ +M + + P Y ++ S+G LD +++E+
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 203 KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 262
P+VV Y + + A + E+K+ I PD Y++L K + ++
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 263 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVIS 322
A + L EM + + N Y + +S Y + K+M N T +I+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 323 SLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKP 382
K G+ +A + Y GD + +L+ ++++ AE + + KGI P
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 383 CYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEH 442
++ +L G+ K G M+K F + + P+ + G+I+ A+
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVE--EGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 443 LLVTLRNAG-HVSTEIYNSLLRTYAKAGKM 471
LL + G H + Y +++ Y K+G +
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 143/371 (38%), Gaps = 56/371 (15%)
Query: 110 YAVHLDLISKIRGLSSAENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMS 167
Y V ++ + K + AE F + K PD S L++ + + +A ++ ++M
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 168 ECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKE 226
E G + YN +L + +G+++K ++L E+ K P+ VTY + D
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 227 TAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEK-------------- 272
A + F E+K + PD Y+TL ++ E+A T +K
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774
Query: 273 ------------------------RTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSL 308
R + N V Y+ ++ G + ++ +M +
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834
Query: 309 FAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMA 368
YT +++ K+G + ++DE + D + ++++ A++ A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Query: 369 -----ESFYNRLVTKGIKPCYTTWELLTWGYLKKGQM---EKVLECFKKAIGSVR-KWVP 419
+ F V G K +T L G+ K G+M EKV+E VR +++P
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME------NMVRLQYIP 948
Query: 420 DHRLITAAYNK 430
D + N+
Sbjct: 949 DSATVIELINE 959
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/415 (18%), Positives = 157/415 (37%), Gaps = 57/415 (13%)
Query: 142 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 201
T L+ + K+ +A++L+ +M G Y+ +++ + D ++ E+
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 202 KK---NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKME 258
N P Y+ + + + E A+ F + + + P +Y++L Y + +
Sbjct: 339 VSHGINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396
Query: 259 LPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYT 318
+ L EM+KR + Y +++ + G D I K+M++ + N YT
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 319 CVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTK 378
+I + ++ F A + E + D N L+ +++ A SF +V
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 379 GIKPCYTTWELLTWGYLKKGQMEKVLECFKK------------AIGSVRKWVPDHRLITA 426
G+KP T+ GY++ + + K+ G + ++ ++I A
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 427 --AYNKLEEQG-------------------DIDGAEHLLVTLRNAGHVSTEI--YNSLLR 463
AY + +QG +D AE + +R G ++ ++ Y L+
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFSYGVLIN 635
Query: 464 TYAKAGKM----------------PLIIVERMQKDNVQMDAETQKVLKITSEMPV 502
++K G M P +I+ M E +K ++ EM V
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 207/480 (43%), Gaps = 22/480 (4%)
Query: 5 SLGATLAAARVFSTKAAKITTLGLATEKKGAGGRDTLGRRLLSLVYAKRSAAIT--MRKW 62
S A + V + ++ LG+ E + G L ++ + LV + +T R +
Sbjct: 68 SAAARFPSLEVSTDSSSSKPILGIEIENERNGSLKLLCKKEVVLVNSIVEQPLTGLSRFF 127
Query: 63 KEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLISKIRG 122
+ + +L +V+ L ++ A+ + EW+ L + + D+ V +++ +I G
Sbjct: 128 DSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQV-IEIFVRILG 186
Query: 123 LSSAENFFENLPDKMRGPD------TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 176
S + L DK+ + + +LH+Y + K +A L E+M E G +
Sbjct: 187 RESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLV 246
Query: 177 PYNHMLNLYISNGQL-DKVPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLE 234
YN +L+++ G+ K+ +L E++ K D T + L+ACA + A++ F E
Sbjct: 247 TYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAE 306
Query: 235 LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGY 294
LK +P ++Y+ L ++ K + +A + LKEME+ +C + V Y+ L++ Y G+
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366
Query: 295 KDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNI 354
E + + M N YT VI + K G+ ++A ++ + + N
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426
Query: 355 LLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK--KAIG 412
+L+ +++ + + G P TW + KG + V F+ K+ G
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486
Query: 413 SVRKWVPDH---RLITAAYNKLEEQGDIDGAEHLLVTLRNAGHVSTEIYNSLLRTYAKAG 469
+ PD + +AY + + +D ++ R + YN+LL A+ G
Sbjct: 487 ----FEPDRDTFNTLISAYGRCGSE--VDASKMYGEMTRAGFNACVTTYNALLNALARKG 540
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 116/280 (41%), Gaps = 8/280 (2%)
Query: 134 PDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDK 193
PD+ DT + L+ +Y + +A + +M+ GF C YN +LN G
Sbjct: 489 PDR----DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRS 544
Query: 194 VPQMLQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTS 252
++ ++K K P +Y+L L A + E+ +K+ +I P W+ TL
Sbjct: 545 GENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLL 604
Query: 253 LYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKM 312
K + +K + + V ++S+LS++T D+ I + +
Sbjct: 605 ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSP 664
Query: 313 NDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFY 372
+ Y ++ V+ GE KAE I E D N ++ + R ++ A
Sbjct: 665 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRML 724
Query: 373 NRLVTKGIKPCYTTWELLTWGYLKKG---QMEKVLECFKK 409
+ + +GI+PC T+ GY G ++E V+EC K
Sbjct: 725 SEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK 764
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 83/157 (52%), Gaps = 1/157 (0%)
Query: 178 YNHMLNLYISNGQLDKVPQMLQELKKNT-SPDVVTYNLWLAACASQNDKETAEKAFLELK 236
+N ML+++ N D+ +L+ ++++ SPD+VTYN + + + AE+ L+
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 237 KTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKD 296
K+++ PD +SY+T+ + + L ++A L EM +R R Y++ +S YT MG
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFA 753
Query: 297 EVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKA 333
E+ + + M + N+ + V+ + G++ +A
Sbjct: 754 EIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 155/392 (39%), Gaps = 41/392 (10%)
Query: 142 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL 201
T + ++ +Y + K EA L M E G + YN +L+L + +++ +ML ++
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 202 KKN-TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELP 260
K N SP+ T+N LA C ++ + + F E+K +PD +++TL S Y +
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507
Query: 261 EKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCV 320
A+ EM + Y++LL+ G + M S K + Y+ +
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLM 567
Query: 321 ISSLVKLGEF---EKAEN------IYDEW-------------ESISGT------------ 346
+ K G + E+ EN I+ W +++G+
Sbjct: 568 LQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGY 627
Query: 347 -GDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLE 405
D + N +L+ + N + AE + G+ P T+ L Y+++G+ K E
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE 687
Query: 406 CFKKAIGSVRKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRT 464
K S K PD +G + A +L + G YN+ +
Sbjct: 688 ILKTLEKSQLK--PDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Query: 465 YAKAGKMPLI--IVERMQKDNVQMDAETQKVL 494
Y G I ++E M K++ + + T K++
Sbjct: 746 YTAMGMFAEIEDVIECMAKNDCRPNELTFKMV 777
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Query: 202 KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPE 261
K PD+V +N L+ N + AE +++ + PD ++Y++L +Y++
Sbjct: 624 KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECW 683
Query: 262 KAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVI 321
KA LK +EK + + V+Y++++ + G E +R+ +M + Y +
Sbjct: 684 KAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFV 743
Query: 322 SSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIK 381
S +G F + E++ + + +++ Y + A F +++ K
Sbjct: 744 SGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI--KTFD 801
Query: 382 PCY 384
PC+
Sbjct: 802 PCF 804
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 163/389 (41%), Gaps = 4/389 (1%)
Query: 59 MRKWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLIS 118
M +G + Y N ++ L K +Y+ A EV M L+ + S Y L
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM-LRSGLSPDSTTYRSLLMEAC 351
Query: 119 KIRGLSSAENFFENLPDKMRGPD-TC-SALLHSYVQNKKSAEAEALMEKMSECGFLKCPL 176
K + E F ++ + PD C S+++ + ++ +A + E G + +
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411
Query: 177 PYNHMLNLYISNGQLDKVPQMLQE-LKKNTSPDVVTYNLWLAACASQNDKETAEKAFLEL 235
Y ++ Y G + + E L++ + DVVTYN L + A+K F E+
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 236 KKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYK 295
+ + PD + + L + K+ + A ++M+++ R + V Y++LL + +G
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 296 DEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNIL 355
D IW M+S Y+ ++++L G +A ++DE S + + N +
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 356 LAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVR 415
+ Y ESF +++++G P ++ L +G++++ M K KK
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 416 KWVPDHRLITAAYNKLEEQGDIDGAEHLL 444
VPD + + Q + AE +L
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 15/290 (5%)
Query: 142 TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISN----GQLDKVPQM 197
T + +LH + K EA+ L +M+E + P ++ L + I G L ++
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTE----RALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 198 LQELK-KNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLT-SLYI 255
Q++K K DVVTYN L D +TA++ + ++ +I P ISYS L +L
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 256 KMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDA 315
K L E A EM + + + +S++ Y G + +KM+S +
Sbjct: 563 KGHLAE-AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 316 EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVP--NILLAAYINRNQLEMAESFYN 373
Y +I V+ KA + + E G P V N +L + +NQ++ AE
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Query: 374 RLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFKKAIGSVRKWVPDHRL 423
+++ +G+ P +T+ + G++ + + + + + R + PD +
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ--RGFSPDDKF 729
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/361 (17%), Positives = 137/361 (37%), Gaps = 35/361 (9%)
Query: 146 LLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKKN- 204
L+ +YVQ +K EA + GF N ++ + G ++ + QE+ ++
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 205 TSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEKAA 264
+V T N+ + A E ++++ + PD ++Y+TL S Y L E+A
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 265 TTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSL 324
+ M + Y+++++ G + ++ +M+ + Y ++
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 325 VKLGEFEKAENIYDEWESISGTGDPRVPNILLAAYINRNQLEMAESFYNRLVTKGIKPCY 384
K G+ + E ++ + S D + +++ + L+ A ++N + G+ P
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 385 TTWELLTWGYLKKGQMEKVLE------------------------CFKKAIGSV------ 414
+ +L GY +KG + + C +K +G
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 415 ---RKWVPDHRLITAAYNKLEEQGDIDGAEHLLVTLRNAG-HVSTEIYNSLLRTYAKAGK 470
R PD +T + + G++ A L ++ + YN+LL + K G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 471 M 471
+
Sbjct: 531 I 531
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 9/236 (3%)
Query: 111 AVHLDLISKIRGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSE 168
+ +D K+ L +A F+ + +K D T + LL + + A+ + M
Sbjct: 484 TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Query: 169 CGFLKCPLPYNHMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAA-CASQNDKE 226
L P+ Y+ ++N S G L + ++ E+ KN P V+ N + C S N +
Sbjct: 544 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603
Query: 227 TAEKAFLE-LKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRT--CRKNRVAYS 283
++FLE + PD ISY+TL +++ E KA +K+ME+ + Y+
Sbjct: 604 G--ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN 661
Query: 284 SLLSLYTNMGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDE 339
S+L + E + +KM+ + + YTC+I+ V +A I+DE
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 124 SSAENFFENLPDKMRGPDTCS--ALLHSYVQNKKSAEAEALMEKMSE--CGFLKCPLPYN 179
S E+F E + + PD S L++ +V+ + ++A L++KM E G + YN
Sbjct: 602 SDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN 661
Query: 180 HMLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 238
+L+ + Q+ + +L+++ ++ +PD TY + SQ++ A + E+ +
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Query: 239 KIDPD 243
PD
Sbjct: 722 GFSPD 726
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 158/349 (45%), Gaps = 24/349 (6%)
Query: 73 ELNRIVRELRKLKRYKHALEVCEWMELQ------YDIKLVSGDY------AVHLDLISKI 120
+ NR++ + KLK+Y + + + ME+ Y +V + ++ L ++ K+
Sbjct: 87 DFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKM 146
Query: 121 RGLSSAENFFENLPDKMRGPDTCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNH 180
L +E PD++ T +L++ + + + ++A +L++KM E G+ + YN
Sbjct: 147 LKLG-----YE--PDRV----TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNA 195
Query: 181 MLNLYISNGQLDKVPQMLQEL-KKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTK 239
+++ +++ +E+ +K P+VVTY + + + A + ++ K K
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 240 IDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVL 299
I P+ I+YS L ++K +A +EM + + + V YSSL++ DE
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 300 RIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLAAY 359
+++ M+S + Y +I+ K E ++ E + N L+ +
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 360 INRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKVLECFK 408
++ A+ F++++ GI P T+ +L G G++EK L F+
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 136/346 (39%), Gaps = 39/346 (11%)
Query: 61 KWKEEGHTVHKYELNRIVRELRKLKRYKHALEVCEWMELQYDIKLVSGDYAVHLDLISKI 120
K E G+ N I+ L K KR A + + +E + I+ Y ++ +
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE-RKGIRPNVVTYTALVNGLCNS 238
Query: 121 RGLSSAENFFENLPDKMRGPD--TCSALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPY 178
S A ++ K P+ T SALL ++V+N K EA+ L E+M
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM------------ 286
Query: 179 NHMLNLYISNGQLDKVPQMLQELKKNTSPDVVTYNLWLAACASQNDKETAEKAFLELKKT 238
++ + PD+VTY+ + + + A + F +
Sbjct: 287 ----------------------VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 239 KIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEV 298
D +SY+TL + + K + E +EM +R N V Y++L+ + G D+
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 299 LRIWKKMMSLFAKMNDA-EYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRVPNILLA 357
+ + M F D Y ++ L GE EKA I+++ + D ++
Sbjct: 385 QEFFSQ-MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 358 AYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWGYLKKGQMEKV 403
++E A S + L KG+KP T+ + G KG + +V
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 489
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Query: 144 SALLHSYVQNKKSAEAEALMEKMSECGFLKCPLPYNHMLNLYISNGQLDKVPQMLQELKK 203
+ L++ + + K+ + L +MS+ G + + YN ++ + G +DK + ++
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Query: 204 -NTSPDVVTYNLWLAACASQNDKETAEKAFLELKKTKIDPDWISYSTLTSLYIKMELPEK 262
SPD+ TYN+ L + E A F +++K ++D D ++Y+T+ K E+
Sbjct: 394 FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Query: 263 AATTLKEMEKRTCRKNRVAYSSLLSLYTNMGYKDEVLRIWKKM 305
A + + + + + V Y++++S G EV ++ KM
Sbjct: 454 AWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 35.8 bits (81), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 48/277 (17%), Positives = 108/277 (38%), Gaps = 40/277 (14%)
Query: 232 FLELKKTKIDPDWISYSTLTSLYIKMELPEKAATTLKEMEKRTCRKNRVAYSSLLSLYTN 291
F ++ K++ P + ++ L S +K++ + + K+ME R + ++ +++ +
Sbjct: 73 FSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCC 132
Query: 292 MGYKDEVLRIWKKMMSLFAKMNDAEYTCVISSLVKLGEFEKAENIYDEWESISGTGDPRV 351
L I KM+ L + + +++ + A ++ D+ I D
Sbjct: 133 CFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA 192
Query: 352 PNILLAAYINRNQLEMAESFYNRLVTKGIKPCYTTWELLTWG------------------ 393
N ++ + ++ A F+ + KGI+P T+ L G
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 394 -----------------YLKKGQMEKVLECFKKAIGSVRKWV-PDHRLITAAYNKLEEQG 435
++K G++ + E F++ VR + PD ++ N L
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEM---VRMSIDPDIVTYSSLINGLCLHD 309
Query: 436 DIDGAEHLLVTLRNAGHVSTEI-YNSLLRTYAKAGKM 471
ID A + + + G ++ + YN+L+ + KA ++
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,315,084
Number of Sequences: 539616
Number of extensions: 7337776
Number of successful extensions: 25541
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 206
Number of HSP's that attempted gapping in prelim test: 21330
Number of HSP's gapped (non-prelim): 1884
length of query: 510
length of database: 191,569,459
effective HSP length: 122
effective length of query: 388
effective length of database: 125,736,307
effective search space: 48785687116
effective search space used: 48785687116
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)