Query         010459
Match_columns 510
No_of_seqs    568 out of 3008
Neff          10.6
Searched_HMMs 13730
Date          Mon Mar 25 07:16:12 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010459.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010459hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1w3ba_ a.118.8.1 (A:) O-GlcNA  99.9 7.2E-19 5.3E-23  168.6  41.0  383  109-503     5-388 (388)
  2 d1w3ba_ a.118.8.1 (A:) O-GlcNA  99.8 8.1E-17 5.9E-21  154.0  42.6  381   69-468     7-388 (388)
  3 d1fcha_ a.118.8.1 (A:) Peroxin  99.5 2.2E-11 1.6E-15  113.0  29.8  240  112-376    28-268 (323)
  4 d1fcha_ a.118.8.1 (A:) Peroxin  99.5 1.5E-11 1.1E-15  114.1  28.2  243  145-411    25-268 (323)
  5 d2onda1 a.118.8.7 (A:242-549)   99.1 3.8E-08 2.8E-12   90.0  25.6   61  350-410   205-268 (308)
  6 d2onda1 a.118.8.7 (A:242-549)   99.0 4.3E-08 3.1E-12   89.7  25.0  187  224-445    79-268 (308)
  7 d2h6fa1 a.118.6.1 (A:55-369) P  99.0 5.7E-08 4.2E-12   89.0  25.2  149  140-292    44-193 (315)
  8 d2h6fa1 a.118.6.1 (A:55-369) P  99.0 1.5E-07 1.1E-11   86.2  25.4  203  175-411    44-247 (315)
  9 d1hz4a_ a.118.8.2 (A:) Transcr  98.9 4.2E-07   3E-11   84.0  27.9   27  384-410   292-318 (366)
 10 d1hz4a_ a.118.8.2 (A:) Transcr  98.9 4.1E-07   3E-11   84.0  27.2  267  110-376    19-319 (366)
 11 d1xnfa_ a.118.8.1 (A:) Lipopro  98.9 1.5E-07 1.1E-11   83.3  20.8   96  176-273    39-134 (259)
 12 d1dcea1 a.118.6.1 (A:1-241,A:3  98.8 4.7E-08 3.4E-12   90.5  16.0  219  190-419    89-310 (334)
 13 d1dcea1 a.118.6.1 (A:1-241,A:3  98.8 7.2E-08 5.3E-12   89.2  16.2  274  108-394    34-321 (334)
 14 d1xnfa_ a.118.8.1 (A:) Lipopro  98.7   3E-07 2.2E-11   81.3  17.9  129  141-272    39-167 (259)
 15 d1hh8a_ a.118.8.1 (A:) Neutrop  98.4 7.7E-06 5.6E-10   68.4  16.9  124  148-276    14-152 (192)
 16 d1hh8a_ a.118.8.1 (A:) Neutrop  98.2 4.2E-05 3.1E-09   63.7  18.0  133  176-314     8-155 (192)
 17 d1qqea_ a.118.8.1 (A:) Vesicul  98.2 1.8E-05 1.3E-09   70.9  16.6  169  105-273    39-228 (290)
 18 d1qqea_ a.118.8.1 (A:) Vesicul  98.2 4.9E-05 3.5E-09   68.0  17.9   90  217-306    45-145 (290)
 19 d1elwa_ a.118.8.1 (A:) Hop {Hu  98.1 4.9E-05 3.5E-09   57.5  14.1   89  148-238    12-100 (117)
 20 d1a17a_ a.118.8.1 (A:) Protein  98.1 8.8E-05 6.4E-09   59.5  16.0   91  146-238    17-107 (159)
 21 d1elwa_ a.118.8.1 (A:) Hop {Hu  98.1 6.8E-05   5E-09   56.6  14.3   91  181-273    10-100 (117)
 22 d2c2la1 a.118.8.1 (A:24-224) S  98.0 5.4E-05   4E-09   63.3  14.2   98  172-271     2-99  (201)
 23 d1a17a_ a.118.8.1 (A:) Protein  98.0 0.00015 1.1E-08   58.0  15.9   93  180-274    16-108 (159)
 24 d2c2la1 a.118.8.1 (A:24-224) S  98.0 7.6E-05 5.5E-09   62.3  14.1  100  206-307     1-100 (201)
 25 d1hxia_ a.118.8.1 (A:) Peroxin  97.8  0.0001 7.3E-09   55.2  11.3   84  149-234    26-109 (112)
 26 d1b89a_ a.118.1.3 (A:) Clathri  97.8    0.01 7.4E-07   53.1  31.5  294  101-443    12-305 (336)
 27 d1hxia_ a.118.8.1 (A:) Peroxin  97.8 0.00011 7.8E-09   55.0  10.7   85  112-199    25-109 (112)
 28 d1nzna_ a.118.8.1 (A:) Mitocho  97.8 9.4E-05 6.9E-09   56.2  10.1  105  320-426     5-113 (122)
 29 d1nzna_ a.118.8.1 (A:) Mitocho  97.7 0.00011 7.7E-09   55.9  10.2   92  145-237     5-100 (122)
 30 d1b89a_ a.118.1.3 (A:) Clathri  97.7  0.0081 5.9E-07   53.8  23.6  138  171-329    11-148 (336)
 31 d1ouva_ a.118.18.1 (A:) Cystei  97.5   0.022 1.6E-06   49.0  27.9   61  141-204     4-68  (265)
 32 d2ff4a2 a.118.8.3 (A:105-283)   97.5 0.00097 7.1E-08   54.2  13.5   69  211-280    69-142 (179)
 33 d1p5qa1 a.118.8.1 (A:258-427)   97.4   0.003 2.2E-07   50.8  15.7   62  211-273    64-125 (170)
 34 d1p5qa1 a.118.8.1 (A:258-427)   97.4  0.0029 2.1E-07   50.8  15.3   62  176-238    64-125 (170)
 35 d2ff4a2 a.118.8.3 (A:105-283)   97.4  0.0022 1.6E-07   52.1  14.1   72  174-246    67-143 (179)
 36 d2fbna1 a.118.8.1 (A:22-174) P  97.4  0.0042 3.1E-07   48.8  15.4   62  211-273    69-130 (153)
 37 d1elra_ a.118.8.1 (A:) Hop {Hu  97.2  0.0023 1.7E-07   48.7  11.9   89  147-236    12-106 (128)
 38 d1elra_ a.118.8.1 (A:) Hop {Hu  97.2  0.0039 2.8E-07   47.3  13.1   93  214-307     9-107 (128)
 39 d1ihga1 a.118.8.1 (A:197-365)   97.1  0.0057 4.2E-07   48.9  14.1   63  210-273    78-140 (169)
 40 d2fbna1 a.118.8.1 (A:22-174) P  97.1   0.014   1E-06   45.6  16.0   24  213-236    21-44  (153)
 41 d1ouva_ a.118.18.1 (A:) Cystei  97.0   0.078 5.7E-06   45.3  31.9  205  102-325     1-225 (265)
 42 d1ihga1 a.118.8.1 (A:197-365)   97.0  0.0097 7.1E-07   47.5  14.5   81  243-325    76-156 (169)
 43 d1zbpa1 e.61.1.1 (A:2-265) Hyp  97.0 0.00066 4.8E-08   59.1   7.5   51  151-202     8-58  (264)
 44 d1zbpa1 e.61.1.1 (A:2-265) Hyp  97.0 0.00062 4.5E-08   59.3   7.4  123  184-308     6-128 (264)
 45 d1kt1a1 a.118.8.1 (A:254-421)   97.0   0.015 1.1E-06   46.3  15.1   62  176-238    66-127 (168)
 46 d1kt1a1 a.118.8.1 (A:254-421)   96.9   0.046 3.3E-06   43.2  17.7   62  211-273    66-127 (168)
 47 d1zu2a1 a.118.8.1 (A:1-145) Mi  96.7  0.0046 3.4E-07   48.0   9.7   69  151-221     9-87  (145)
 48 d1ya0a1 a.118.8.1 (A:1-497) SM  96.7  0.0006 4.4E-08   65.7   5.2  112  244-359   120-231 (497)
 49 d1zu2a1 a.118.8.1 (A:1-145) Mi  96.6  0.0057 4.1E-07   47.5   9.5  117  184-310     7-144 (145)
 50 d2hr2a1 a.118.8.8 (A:2-157) Hy  96.5   0.022 1.6E-06   44.5  12.6   55  112-166    18-82  (156)
 51 d1ya0a1 a.118.8.1 (A:1-497) SM  96.3  0.0011 7.8E-08   63.9   4.2  134  258-397   100-234 (497)
 52 d2hr2a1 a.118.8.8 (A:2-157) Hy  96.3   0.031 2.3E-06   43.6  12.5   26  210-235    56-81  (156)
 53 d1tjca_ a.118.8.1 (A:) Prolyl   95.0    0.13 9.8E-06   35.8  10.3   60  179-238    10-75  (95)
 54 d1tjca_ a.118.8.1 (A:) Prolyl   94.9   0.079 5.7E-06   37.1   8.8   62  107-168     9-75  (95)
 55 d1klxa_ a.118.18.1 (A:) Cystei  94.0    0.78 5.7E-05   33.9  14.5   48  259-309    74-125 (133)
 56 d1klxa_ a.118.18.1 (A:) Cystei  93.5    0.99 7.2E-05   33.3  14.2  111  154-275     8-126 (133)
 57 d1wy6a1 a.118.20.1 (A:7-167) H  89.3     2.8 0.00021   30.3  16.2  139  151-311    14-152 (161)
 58 d1wy6a1 a.118.20.1 (A:7-167) H  87.3     3.9 0.00028   29.5  13.9  141  113-276    12-152 (161)
 59 d2pqrb1 a.118.8.1 (B:5-128) Mi  81.4     5.8 0.00042   28.5   9.0   23  215-237    79-101 (124)
 60 d1v54e_ a.118.11.1 (E:) Cytoch  81.2     6.2 0.00045   26.9   8.8   48  259-306    21-68  (105)
 61 d1v54e_ a.118.11.1 (E:) Cytoch  78.5     7.7 0.00056   26.4   9.0   45  192-236    24-68  (105)
 62 d2nsza1 a.118.1.14 (A:322-450)  60.8      23  0.0017   25.3   8.4   68  247-315    10-79  (129)
 63 d1qsaa1 a.118.5.1 (A:1-450) 70  60.0      57  0.0041   28.9  31.4  204  258-481   228-441 (450)
 64 d1khda1 a.46.2.1 (A:12-80) Ant  58.8      17  0.0013   22.6   7.3   47  121-169    19-65  (69)
 65 d2pqrb1 a.118.8.1 (B:5-128) Mi  58.5      27   0.002   24.8  10.8   66  242-308    33-102 (124)
 66 d1ug3a1 a.118.1.14 (A:1235-142  55.1      26  0.0019   27.1   8.4   25  247-271    13-37  (193)
 67 d1uoha_ d.211.1.1 (A:) 26S pro  51.7     4.6 0.00034   32.4   3.3   14  149-162    10-23  (223)
 68 d1mzba_ a.4.5.42 (A:) Ferric u  43.3      26  0.0019   25.1   6.2   60  270-330     7-67  (134)
 69 d1qsaa1 a.118.5.1 (A:1-450) 70  43.0 1.1E+02  0.0077   26.9  26.4  325  143-505    76-430 (450)
 70 d2nsza1 a.118.1.14 (A:322-450)  42.0      53  0.0039   23.3   9.6   22  179-200    12-33  (129)
 71 d1mzba_ a.4.5.42 (A:) Ferric u  41.4      48  0.0035   23.6   7.4   62  234-296     6-68  (134)
 72 d1khda1 a.46.2.1 (A:12-80) Ant  37.9      41   0.003   20.7   7.1    7  193-199    20-26  (69)
 73 d2f6ma1 a.2.17.1 (A:322-385) V  34.0      32  0.0023   21.0   4.2   46  141-187     3-48  (64)
 74 d1u9pa1 a.43.1.1 (A:72-107) Ar  31.1      28   0.002   17.6   2.9   22  133-154    14-35  (36)
 75 d2f6ma1 a.2.17.1 (A:322-385) V  28.2      46  0.0033   20.3   4.2   26  214-239     6-31  (64)
 76 d1ug3a1 a.118.1.14 (A:1235-142  26.7      40  0.0029   26.0   5.0   25  142-166    13-37  (193)
 77 d1uoha_ d.211.1.1 (A:) 26S pro  25.6      31  0.0023   27.0   4.3   20   66-85      5-24  (223)
 78 d2fnaa1 a.4.5.11 (A:284-356) H  23.0      80  0.0058   19.8   4.8   48  105-155     7-54  (73)
 79 d2tpta1 a.46.2.1 (A:1-70) Thym  21.4      86  0.0063   19.1   5.7   47  121-169    21-67  (70)

No 1  
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88  E-value=7.2e-19  Score=168.57  Aligned_cols=383  Identities=9%  Similarity=-0.071  Sum_probs=310.8

Q ss_pred             HHHHHHhcCCCCcHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcC
Q 010459          109 VIRFLKNSSRSRQIPQVFDMWKNIEKSRINEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIG  188 (510)
Q Consensus       109 ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g  188 (510)
                      +...+.+.|++++|.+.++.+.+.  .+-+...+..+...|.+.|++++|...|++..+.. +-+..+|..+...|.+.|
T Consensus         5 la~~~~~~G~~~~A~~~~~~~l~~--~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~a~~~l~~~~~~~g   81 (388)
T d1w3ba_           5 LAHREYQAGDFEAAERHCMQLWRQ--EPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERG   81 (388)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHhhhhc
Confidence            345677889999999999998752  34467888999999999999999999999998764 336789999999999999


Q ss_pred             ChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 010459          189 KFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYK  268 (510)
Q Consensus       189 ~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~  268 (510)
                      ++++|++.+....+.... +..............+....+........... .................+....+...+.
T Consensus        82 ~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (388)
T d1w3ba_          82 QLQEAIEHYRHALRLKPD-FIDGYINLAAALVAAGDMEGAVQAYVSALQYN-PDLYCVRSDLGNLLKALGRLEEAKACYL  159 (388)
T ss_dssp             CHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHC-TTCTHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred             cccccccccccccccccc-cccccccccccccccccccccccccccccccc-cccccccccccccccccchhhhhHHHHH
Confidence            999999999999876543 45555555656666666666666666555443 3455566666777788888999998888


Q ss_pred             HHHHCCCccCHHHHHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhcchhHHHHHHHHHHhhcCCch
Q 010459          269 SMLTKRMHLRSSTMVAILDAYMNFGMLDKMEKFYKRLLNSRTPLKEDLVRKLAEVYIKNYMFSRLDDLGDDLASRIGRTE  348 (510)
Q Consensus       269 ~m~~~g~~p~~~t~~~ll~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~  348 (510)
                      ....... -+...+..+...+...|+.++|...+....+.. +-+...+..+...|...|++++|...+.......+...
T Consensus       160 ~~~~~~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~  237 (388)
T d1w3ba_         160 KAIETQP-NFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD-PNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHA  237 (388)
T ss_dssp             HHHHHCT-TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCH
T ss_pred             HhhccCc-chhHHHHhhcccccccCcHHHHHHHHHHHHHhC-cccHHHHHHHhhhhhccccHHHHHHHHHHhHHHhhhHH
Confidence            8776532 256778888889999999999999999988754 34567888899999999999999999999998888999


Q ss_pred             HHHHHHHHHhhhhcccccHHHHHHHHHHCCCCcCHHHHHHHHHHHHcCCChhHHHHHHHhhhhCCCCCCHHHHHHHHHhh
Q 010459          349 LVWCLRLLSHACLLSHRGIDSVVREMESAKVRWNVTTANIILLAYLKMKDFKHLRVLLSELPTRHVKPDIVTIGILYDAR  428 (510)
Q Consensus       349 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~p~~~t~~~li~~~  428 (510)
                      ..+..+...+...|+.++|.+.|++..+..+. +..+|..+...+.+.|++++|.+.++..... ...+...+..+...+
T Consensus       238 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~l~~~~  315 (388)
T d1w3ba_         238 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPH-FPDAYCNLANALKEKGSVAEAEDCYNTALRL-CPTHADSLNNLANIK  315 (388)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS-CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHhhhcc-CCccchhhhHHHHHH
Confidence            99999999999999999999999999887654 6788999999999999999999999988764 234667777888889


Q ss_pred             hhcCccchHHHHHHHcCCccccccccChhHHHHHhhccCchhHHHHHHhhcCCCCCCCC-cccHHHHHHHHHhcCC
Q 010459          429 RIGFDGTGALEMWKRIGFLFKTVEINTDPLVLAVYGKGHFLRYCEEVYSSLEPYSREKK-RWTYQNLIDLVIKHNG  503 (510)
Q Consensus       429 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~p~-~~~~~~li~~~~~~g~  503 (510)
                      ...|++++|++.+++..... |.+...+..+...|.+.|++++|.+.|++..+  +.|+ ...|..+...|.+.|+
T Consensus       316 ~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~--l~P~~~~a~~~lg~~~~~~~D  388 (388)
T d1w3ba_         316 REQGNIEEAVRLYRKALEVF-PEFAAAHSNLASVLQQQGKLQEALMHYKEAIR--ISPTFADAYSNMGNTLKEMQD  388 (388)
T ss_dssp             HTTTCHHHHHHHHHHHTTSC-TTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHT--TCTTCHHHHHHHHHHHHHTCC
T ss_pred             HHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHcCC
Confidence            99999999999999975442 22344566677889999999999999999887  5665 4578888888888775


No 2  
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84  E-value=8.1e-17  Score=154.01  Aligned_cols=381  Identities=10%  Similarity=-0.013  Sum_probs=302.1

Q ss_pred             HHhhhhhHHHHHHHHHcccCCCchhhhhccCCCChhhHHHHHHHHHhcCCCCcHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 010459           69 ESYHEHQALNALIQRLNKKVSCPLQILQHDGDWTKDHFWAVIRFLKNSSRSRQIPQVFDMWKNIEKSRINEFNSQKIIGM  148 (510)
Q Consensus        69 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~  148 (510)
                      ..+.+.|.+.++++.+.       ..++..+ -++..+..+...|.+.|++++|.+.|+...+.  .+-+..+|..+...
T Consensus         7 ~~~~~~G~~~~A~~~~~-------~~l~~~p-~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~--~p~~~~a~~~l~~~   76 (388)
T d1w3ba_           7 HREYQAGDFEAAERHCM-------QLWRQEP-DNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQ--NPLLAEAYSNLGNV   76 (388)
T ss_dssp             HHHHHHTCHHHHHHHHH-------HHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHH-------HHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHH
Confidence            44567788889988887       5554432 25678888889999999999999999998752  24467889999999


Q ss_pred             HHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHH
Q 010459          149 LCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEI  228 (510)
Q Consensus       149 ~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a  228 (510)
                      |.+.|++++|+..+....+.. ..+...+..........+....+............. ...............+....+
T Consensus        77 ~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  154 (388)
T d1w3ba_          77 YKERGQLQEAIEHYRHALRLK-PDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPD-LYCVRSDLGNLLKALGRLEEA  154 (388)
T ss_dssp             HHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTT-CTHHHHHHHHHHHTTSCHHHH
T ss_pred             hhhhccccccccccccccccc-cccccccccccccccccccccccccccccccccccc-cccccccccccccccchhhhh
Confidence            999999999999999998765 335566666666666777777777766666555433 445556666677788888888


Q ss_pred             HHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCccCHHHHHHHHHHHHhcCChhHHHHHHHHHHhc
Q 010459          229 DMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEKFYKRLLNS  308 (510)
Q Consensus       229 ~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~~g~~~~a~~~~~~m~~~  308 (510)
                      ...+....... +.+...+..+...+...|++++|...+++..+.... +...+..+...+...|++++|...+....+.
T Consensus       155 ~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~  232 (388)
T d1w3ba_         155 KACYLKAIETQ-PNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPN-FLDAYINLGNVLKEARIFDRAVAAYLRALSL  232 (388)
T ss_dssp             HHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCTTHHHHHHHHHHHH
T ss_pred             HHHHHHhhccC-cchhHHHHhhcccccccCcHHHHHHHHHHHHHhCcc-cHHHHHHHhhhhhccccHHHHHHHHHHhHHH
Confidence            88888877654 346778888889999999999999999998875422 5678888999999999999999999998876


Q ss_pred             CCCCCHHHHHHHHHHHHhhcchhHHHHHHHHHHhhcCCchHHHHHHHHHhhhhcccccHHHHHHHHHHCCCCcCHHHHHH
Q 010459          309 RTPLKEDLVRKLAEVYIKNYMFSRLDDLGDDLASRIGRTELVWCLRLLSHACLLSHRGIDSVVREMESAKVRWNVTTANI  388 (510)
Q Consensus       309 ~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~~~~~  388 (510)
                      . +.+...+..+...|.+.|++++|...++......+.+..+|..+...+...|+.++|.+.++........ +...+..
T Consensus       233 ~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~  310 (388)
T d1w3ba_         233 S-PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNN  310 (388)
T ss_dssp             C-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHH
T ss_pred             h-hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc-cchhhhH
Confidence            5 4566778888999999999999999999998888899999999999999999999999999988876543 7788888


Q ss_pred             HHHHHHcCCChhHHHHHHHhhhhCCCCCC-HHHHHHHHHhhhhcCccchHHHHHHHcCCccccccccChhHHHHHhhccC
Q 010459          389 ILLAYLKMKDFKHLRVLLSELPTRHVKPD-IVTIGILYDARRIGFDGTGALEMWKRIGFLFKTVEINTDPLVLAVYGKGH  467 (510)
Q Consensus       389 li~~~~~~g~~~~A~~~~~~m~~~g~~p~-~~t~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g  467 (510)
                      +...+.+.|++++|+..|++..+.  .|+ ...+..+-..+...|++++|++.+++.....+ .+...+..+...|.+.|
T Consensus       311 l~~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~P-~~~~a~~~lg~~~~~~~  387 (388)
T d1w3ba_         311 LANIKREQGNIEEAVRLYRKALEV--FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISP-TFADAYSNMGNTLKEMQ  387 (388)
T ss_dssp             HHHHHHTTTCHHHHHHHHHHHTTS--CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCT-TCHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcC
Confidence            999999999999999999998863  565 45677777889999999999999998744321 22334555555665554


Q ss_pred             c
Q 010459          468 F  468 (510)
Q Consensus       468 ~  468 (510)
                      |
T Consensus       388 D  388 (388)
T d1w3ba_         388 D  388 (388)
T ss_dssp             C
T ss_pred             C
Confidence            3


No 3  
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49  E-value=2.2e-11  Score=113.03  Aligned_cols=240  Identities=10%  Similarity=-0.040  Sum_probs=104.6

Q ss_pred             HHHhcCCCCcHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCChH
Q 010459          112 FLKNSSRSRQIPQVFDMWKNIEKSRINEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFN  191 (510)
Q Consensus       112 ~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~  191 (510)
                      .+.+.|++++|.+.|+...+  ..+-+...|..+..+|...|++++|...|++..+.. +-+...|..+...|...|+++
T Consensus        28 ~~~~~g~~~~A~~~~~~al~--~~P~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~~~~~  104 (323)
T d1fcha_          28 RRLQEGDLPNAVLLFEAAVQ--QDPKHMEAWQYLGTTQAENEQELLAISALRRCLELK-PDNQTALMALAVSFTNESLQR  104 (323)
T ss_dssp             HHHHTTCHHHHHHHHHHHHH--SCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHH
T ss_pred             HHHHcCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHcCChHHHHHHHHhhhccc-ccccccccccccccccccccc
Confidence            34455555555555555542  222234455555555555555555555555554432 123445555555555555555


Q ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010459          192 EALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSML  271 (510)
Q Consensus       192 ~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~  271 (510)
                      +|.+.+++.....  |+............                   ...+.......+..+...+..++|.+.|.+..
T Consensus       105 ~A~~~~~~~~~~~--~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al  163 (323)
T d1fcha_         105 QACEILRDWLRYT--PAYAHLVTPAEEGA-------------------GGAGLGPSKRILGSLLSDSLFLEVKELFLAAV  163 (323)
T ss_dssp             HHHHHHHHHHHTS--TTTGGGCC----------------------------------CTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccchhhHHHhc--cchHHHHHhhhhhh-------------------hhcccccchhhHHHHHHhhHHHHHHHHHHHHH
Confidence            5555555554421  11100000000000                   00000001111122233344455555555444


Q ss_pred             HCC-CccCHHHHHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhcchhHHHHHHHHHHhhcCCchHH
Q 010459          272 TKR-MHLRSSTMVAILDAYMNFGMLDKMEKFYKRLLNSRTPLKEDLVRKLAEVYIKNYMFSRLDDLGDDLASRIGRTELV  350 (510)
Q Consensus       272 ~~g-~~p~~~t~~~ll~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~  350 (510)
                      ... -.++...+..+...+...|++++|...++...+.. +-+...+..+...|.+.|++++|.+.+.......+.+..+
T Consensus       164 ~~~p~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a  242 (323)
T d1fcha_         164 RLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVR-PNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRS  242 (323)
T ss_dssp             HHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred             HHhhcccccccchhhHHHHHHHHHHhhhhcccccccccc-cccccchhhhhhcccccccchhHHHHHHHHHHHhhccHHH
Confidence            321 12234444555555555555555555555554432 2234444445555555555555555544444444444445


Q ss_pred             HHHHHHHhhhhcccccHHHHHHHHHH
Q 010459          351 WCLRLLSHACLLSHRGIDSVVREMES  376 (510)
Q Consensus       351 ~~~li~~~~~~~~~~~a~~~~~~m~~  376 (510)
                      |..+...|...|+.++|++.|++..+
T Consensus       243 ~~~lg~~~~~~g~~~~A~~~~~~al~  268 (323)
T d1fcha_         243 RYNLGISCINLGAHREAVEHFLEALN  268 (323)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence            55555555555555555555554443


No 4  
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48  E-value=1.5e-11  Score=114.15  Aligned_cols=243  Identities=11%  Similarity=0.003  Sum_probs=166.2

Q ss_pred             HHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCC
Q 010459          145 IIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKM  224 (510)
Q Consensus       145 li~~~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~  224 (510)
                      .-..+.+.|++++|+..|++..+.. +.+..+|..+...|...|++++|...|++..+.... +...|..+...|.+.|+
T Consensus        25 ~g~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~  102 (323)
T d1fcha_          25 EGLRRLQEGDLPNAVLLFEAAVQQD-PKHMEAWQYLGTTQAENEQELLAISALRRCLELKPD-NQTALMALAVSFTNESL  102 (323)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHSC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCChHHHHHHHHhhhccccc-ccccccccccccccccc
Confidence            3445667788888888888777664 225667777777777778888888777777664322 45666777777777777


Q ss_pred             HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCccCHHHHHHHHHHHHhcCChhHHHHHHHH
Q 010459          225 YDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEKFYKR  304 (510)
Q Consensus       225 ~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~~g~~~~a~~~~~~  304 (510)
                      +++|.+.+++.....  |+..............                   .+.......+..+...+...++.+.+..
T Consensus       103 ~~~A~~~~~~~~~~~--~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~a~~~~~~  161 (323)
T d1fcha_         103 QRQACEILRDWLRYT--PAYAHLVTPAEEGAGG-------------------AGLGPSKRILGSLLSDSLFLEVKELFLA  161 (323)
T ss_dssp             HHHHHHHHHHHHHTS--TTTGGGCC----------------------------------CTTHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhhHHHhc--cchHHHHHhhhhhhhh-------------------cccccchhhHHHHHHhhHHHHHHHHHHH
Confidence            777777777766542  2211110000000000                   0001111122233444566778888887


Q ss_pred             HHhcC-CCCCHHHHHHHHHHHHhhcchhHHHHHHHHHHhhcCCchHHHHHHHHHhhhhcccccHHHHHHHHHHCCCCcCH
Q 010459          305 LLNSR-TPLKEDLVRKLAEVYIKNYMFSRLDDLGDDLASRIGRTELVWCLRLLSHACLLSHRGIDSVVREMESAKVRWNV  383 (510)
Q Consensus       305 m~~~~-~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~  383 (510)
                      ..+.. -.++..++..+...+...|++++|...+.......+.+...|..+...+...|+.++|.+.|++..+..+. +.
T Consensus       162 al~~~p~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~  240 (323)
T d1fcha_         162 AVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPG-YI  240 (323)
T ss_dssp             HHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CH
T ss_pred             HHHHhhcccccccchhhHHHHHHHHHHhhhhcccccccccccccccchhhhhhcccccccchhHHHHHHHHHHHhhc-cH
Confidence            76533 34567778888888999999999999998888888888889999999999999999999999988876443 57


Q ss_pred             HHHHHHHHHHHcCCChhHHHHHHHhhhh
Q 010459          384 TTANIILLAYLKMKDFKHLRVLLSELPT  411 (510)
Q Consensus       384 ~~~~~li~~~~~~g~~~~A~~~~~~m~~  411 (510)
                      .+|..+..+|.+.|++++|+..|++.++
T Consensus       241 ~a~~~lg~~~~~~g~~~~A~~~~~~al~  268 (323)
T d1fcha_         241 RSRYNLGISCINLGAHREAVEHFLEALN  268 (323)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence            7888888899999999999999988765


No 5  
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.06  E-value=3.8e-08  Score=90.02  Aligned_cols=61  Identities=5%  Similarity=-0.140  Sum_probs=29.7

Q ss_pred             HHHHHHHHhhhhcccccHHHHHHHHHHCC-CCcC--HHHHHHHHHHHHcCCChhHHHHHHHhhh
Q 010459          350 VWCLRLLSHACLLSHRGIDSVVREMESAK-VRWN--VTTANIILLAYLKMKDFKHLRVLLSELP  410 (510)
Q Consensus       350 ~~~~li~~~~~~~~~~~a~~~~~~m~~~g-~~p~--~~~~~~li~~~~~~g~~~~A~~~~~~m~  410 (510)
                      .|...+......|+.+.|..+|++..+.. ..|+  ...|...+.--.+.|+.+.+.++++++.
T Consensus       205 ~w~~y~~~~~~~g~~~~aR~~fe~ai~~~~~~~~~~~~iw~~~~~fE~~~G~~~~~~~~~~r~~  268 (308)
T d2onda1         205 YVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRF  268 (308)
T ss_dssp             HHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence            33333333334444444444555544432 2222  3455555555555566666666666654


No 6  
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.04  E-value=4.3e-08  Score=89.68  Aligned_cols=187  Identities=9%  Similarity=-0.043  Sum_probs=118.0

Q ss_pred             CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCccCHHHHHHHHHHHHhcCChhHHHHHHH
Q 010459          224 MYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEKFYK  303 (510)
Q Consensus       224 ~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~~g~~~~a~~~~~  303 (510)
                      ..++|..+|++..+...+.+...|...+..+.+.|+.+.|..+|+.+.+.........|...+..+.+.|+.+.|+++|+
T Consensus        79 ~~~~a~~i~~ral~~~~p~~~~l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~  158 (308)
T d2onda1          79 FSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFK  158 (308)
T ss_dssp             HHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHH
Confidence            34566777777665444455666777777777777777777777777654333234456677777777777777777777


Q ss_pred             HHHhcCCCCCHHHHHHHHHHHHhhcchhHHHHHHHHHHhhcCCchHHHHHHHHHhhhhcccccHHHHHHHHHHCCCCcCH
Q 010459          304 RLLNSRTPLKEDLVRKLAEVYIKNYMFSRLDDLGDDLASRIGRTELVWCLRLLSHACLLSHRGIDSVVREMESAKVRWNV  383 (510)
Q Consensus       304 ~m~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~  383 (510)
                      ...+.+. .+...+......                                 -+...|+.+.|..+|+.+.+..+. +.
T Consensus       159 ~al~~~~-~~~~~~~~~a~~---------------------------------e~~~~~~~~~a~~i~e~~l~~~p~-~~  203 (308)
T d2onda1         159 KAREDAR-TRHHVYVTAALM---------------------------------EYYCSKDKSVAFKIFELGLKKYGD-IP  203 (308)
T ss_dssp             HHHTSTT-CCTHHHHHHHHH---------------------------------HHHTSCCHHHHHHHHHHHHHHHTT-CH
T ss_pred             HHHHhCC-CcHHHHHHHHHH---------------------------------HHHhccCHHHHHHHHHHHHHhhhh-hH
Confidence            7665442 122222111111                                 112234445566667776665322 57


Q ss_pred             HHHHHHHHHHHcCCChhHHHHHHHhhhhC-CCCCC--HHHHHHHHHhhhhcCccchHHHHHHHcC
Q 010459          384 TTANIILLAYLKMKDFKHLRVLLSELPTR-HVKPD--IVTIGILYDARRIGFDGTGALEMWKRIG  445 (510)
Q Consensus       384 ~~~~~li~~~~~~g~~~~A~~~~~~m~~~-g~~p~--~~t~~~li~~~~~~~~~~~a~~~~~~~~  445 (510)
                      ..|...+..+.+.|+.+.|..+|++..+. +..|+  ...|...+.--...|+.+.+.++.+++.
T Consensus       204 ~~w~~y~~~~~~~g~~~~aR~~fe~ai~~~~~~~~~~~~iw~~~~~fE~~~G~~~~~~~~~~r~~  268 (308)
T d2onda1         204 EYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRF  268 (308)
T ss_dssp             HHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence            77888888888888888888888887753 34554  2457777776667788888888887763


No 7  
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.02  E-value=5.7e-08  Score=89.04  Aligned_cols=149  Identities=6%  Similarity=-0.055  Sum_probs=91.6

Q ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q 010459          140 FNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIG-KFNEALLFLNEMKEMNLSPQSDTYDGLIQA  218 (510)
Q Consensus       140 ~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g-~~~~a~~~~~~m~~~g~~p~~~t~~~li~~  218 (510)
                      ..++.+-..+.+.+..++|++++++..+... -+...|+....++...| ++++|++.++...+.... +..+|+.+...
T Consensus        44 ~a~~~~~~~~~~~e~~~~Al~~~~~ai~lnP-~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~-~~~a~~~~~~~  121 (315)
T d2h6fa1          44 DVYDYFRAVLQRDERSERAFKLTRDAIELNA-ANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVL  121 (315)
T ss_dssp             HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCchHHHHHHHHHHHHHCC-CChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh-hhhHHHHHhHH
Confidence            3455555566666777777777777766532 24556666666666654 367777777766654433 56666666666


Q ss_pred             HHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCccCHHHHHHHHHHHHhc
Q 010459          219 YGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNF  292 (510)
Q Consensus       219 ~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~~  292 (510)
                      +.+.|++++|...++++.+.. +.+...|..+...+.+.|++++|++.|++..+.+.. +...|+.+...+.+.
T Consensus       122 ~~~l~~~~eAl~~~~kal~~d-p~n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~~p~-n~~a~~~r~~~l~~~  193 (315)
T d2h6fa1         122 VEWLRDPSQELEFIADILNQD-AKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVR-NNSVWNQRYFVISNT  193 (315)
T ss_dssp             HHHHTCCTTHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHHT
T ss_pred             HHhhccHHHHHHHHhhhhhhh-hcchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHCCc-cHHHHHHHHHHHHHc
Confidence            667777777777777666553 345666666666677777777777777766665332 444555444444333


No 8  
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.96  E-value=1.5e-07  Score=86.19  Aligned_cols=203  Identities=9%  Similarity=-0.014  Sum_probs=121.6

Q ss_pred             HHHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccC-CHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 010459          175 EIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYK-MYDEIDMCLKMMKLDGCSPDHITYNLLIQE  253 (510)
Q Consensus       175 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g-~~~~a~~~~~~m~~~g~~~~~~~~~~li~~  253 (510)
                      ..|+.+-..+.+.+..++|++++++..+.... +...|+.....+.+.| ++++|...++...+.. +.+..+|..+-..
T Consensus        44 ~a~~~~~~~~~~~e~~~~Al~~~~~ai~lnP~-~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~-p~~~~a~~~~~~~  121 (315)
T d2h6fa1          44 DVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQ-PKNYQVWHHRRVL  121 (315)
T ss_dssp             HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCchHHHHHHHHHHHHHCCC-ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHH-HhhhhHHHHHhHH
Confidence            45556666666777777777777777764322 4456666666666655 4677777777766554 3456677777777


Q ss_pred             HHHcCCHHHHHHHHHHHHHCCCccCHHHHHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhcchhHH
Q 010459          254 FACAGLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEKFYKRLLNSRTPLKEDLVRKLAEVYIKNYMFSRL  333 (510)
Q Consensus       254 ~~~~g~~~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~~~~li~~~~~~~~~~~a  333 (510)
                      +.+.|++++|++.++.+.+.... +...|..+...+...|++++|.+.++.+++.. +.+...|+.+...+.+.+...  
T Consensus       122 ~~~l~~~~eAl~~~~kal~~dp~-n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~~-p~n~~a~~~r~~~l~~~~~~~--  197 (315)
T d2h6fa1         122 VEWLRDPSQELEFIADILNQDAK-NYHAWQHRQWVIQEFKLWDNELQYVDQLLKED-VRNNSVWNQRYFVISNTTGYN--  197 (315)
T ss_dssp             HHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCSC--
T ss_pred             HHhhccHHHHHHHHhhhhhhhhc-chHHHHHHHHHHHHHHhhHHHHHHHHHHHHHC-CccHHHHHHHHHHHHHccccc--
Confidence            77777777777777777665322 56667777777777777777777777776654 234444444444443333221  


Q ss_pred             HHHHHHHHhhcCCchHHHHHHHHHhhhhcccccHHHHHHHHHHCCCCcCHHHHHHHHHHHHcCCChhHHHHHHHhhhh
Q 010459          334 DDLGDDLASRIGRTELVWCLRLLSHACLLSHRGIDSVVREMESAKVRWNVTTANIILLAYLKMKDFKHLRVLLSELPT  411 (510)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~~~~~li~~~~~~g~~~~A~~~~~~m~~  411 (510)
                                                ..+..++|++.+....+..+. |...|+.+...+.+ ...+++.+.++...+
T Consensus       198 --------------------------~~~~~~~ai~~~~~al~~~P~-~~~~~~~l~~ll~~-~~~~~~~~~~~~~~~  247 (315)
T d2h6fa1         198 --------------------------DRAVLEREVQYTLEMIKLVPH-NESAWNYLKGILQD-RGLSKYPNLLNQLLD  247 (315)
T ss_dssp             --------------------------SHHHHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHTT-TCGGGCHHHHHHHHH
T ss_pred             --------------------------hhhhhHHhHHHHHHHHHhCCC-chHHHHHHHHHHHh-cChHHHHHHHHHHHH
Confidence                                      112234566666666655443 56666665554443 335666666666654


No 9  
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=98.93  E-value=4.2e-07  Score=83.99  Aligned_cols=27  Identities=7%  Similarity=0.012  Sum_probs=16.9

Q ss_pred             HHHHHHHHHHHcCCChhHHHHHHHhhh
Q 010459          384 TTANIILLAYLKMKDFKHLRVLLSELP  410 (510)
Q Consensus       384 ~~~~~li~~~~~~g~~~~A~~~~~~m~  410 (510)
                      .++..+-..|.+.|++++|.+.+++..
T Consensus       292 ~~~~~la~~~~~~g~~~~A~~~l~~Al  318 (366)
T d1hz4a_         292 RNLLLLNQLYWQAGRKSDAQRVLLDAL  318 (366)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence            345555566666777777776666553


No 10 
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=98.92  E-value=4.1e-07  Score=84.05  Aligned_cols=267  Identities=11%  Similarity=-0.028  Sum_probs=191.6

Q ss_pred             HHHHHhcCCCCcHHHHHHHHHhhcCCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhCCC-CCC----HHHHHHHH
Q 010459          110 IRFLKNSSRSRQIPQVFDMWKNIEKSRIN---EFNSQKIIGMLCEEGLMEEAVRAFQEMEGFAL-KPS----LEIYNSII  181 (510)
Q Consensus       110 l~~~~~~g~~~~a~~~~~~~~~~~~~~~~---~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~-~~~----~~~~~~li  181 (510)
                      ...+...|++++|.++++.......-.++   ...++.+...|...|++++|+..|++..+... .++    ..++..+.
T Consensus        19 A~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~   98 (366)
T d1hz4a_          19 AQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQS   98 (366)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Confidence            45577899999999999988752211111   24677788899999999999999998764311 112    34566777


Q ss_pred             HHHHhcCChHHHHHHHHHHHH----CCCC--CC-HHHHHHHHHHHHccCCHHHHHHHHHHHHhC----CCCCCHHHHHHH
Q 010459          182 HGYSKIGKFNEALLFLNEMKE----MNLS--PQ-SDTYDGLIQAYGKYKMYDEIDMCLKMMKLD----GCSPDHITYNLL  250 (510)
Q Consensus       182 ~~~~~~g~~~~a~~~~~~m~~----~g~~--p~-~~t~~~li~~~~~~g~~~~a~~~~~~m~~~----g~~~~~~~~~~l  250 (510)
                      ..+...|++..+...+.+...    .+..  +. ...+..+...+...|+++.+...+......    +.......+..+
T Consensus        99 ~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (366)
T d1hz4a_          99 EILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAML  178 (366)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHhcccchhhHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHhhhhhhhhHHHHHHHH
Confidence            888999999999999887653    2221  11 235566778889999999999999887653    222334556667


Q ss_pred             HHHHHHcCCHHHHHHHHHHHHHC----CCccC--HHHHHHHHHHHHhcCChhHHHHHHHHHHhcCCCC---CHHHHHHHH
Q 010459          251 IQEFACAGLLKRMEGTYKSMLTK----RMHLR--SSTMVAILDAYMNFGMLDKMEKFYKRLLNSRTPL---KEDLVRKLA  321 (510)
Q Consensus       251 i~~~~~~g~~~~A~~~~~~m~~~----g~~p~--~~t~~~ll~~~~~~g~~~~a~~~~~~m~~~~~~~---~~~~~~~li  321 (510)
                      ...+...++...+...+.+....    +..+.  ...+......+...|+.++|.+.+....+.....   ....+..+.
T Consensus       179 ~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la  258 (366)
T d1hz4a_         179 IQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIA  258 (366)
T ss_dssp             HHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHH
T ss_pred             HHHHHhhhhHHHHHHHHHHHHHHHHHhcccCchHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHH
Confidence            77888899999999988776532    21111  2345666777888999999999998876543222   234556688


Q ss_pred             HHHHhhcchhHHHHHHHHHHhh------cCCchHHHHHHHHHhhhhcccccHHHHHHHHHH
Q 010459          322 EVYIKNYMFSRLDDLGDDLASR------IGRTELVWCLRLLSHACLLSHRGIDSVVREMES  376 (510)
Q Consensus       322 ~~~~~~~~~~~a~~~~~~~~~~------~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~  376 (510)
                      ..|...|++++|...+......      .+.....+..+...|...|+.++|.+.+++..+
T Consensus       259 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~Al~  319 (366)
T d1hz4a_         259 RAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALK  319 (366)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHHhhcccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence            8999999999999998776522      223355677788899999999999999987654


No 11 
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=98.86  E-value=1.5e-07  Score=83.29  Aligned_cols=96  Identities=7%  Similarity=-0.091  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHH
Q 010459          176 IYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFA  255 (510)
Q Consensus       176 ~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~  255 (510)
                      +|..+...|.+.|++++|++.|++.++.... +..+|+.+..+|.+.|++++|...|++..+.. +-+..+|..+...|.
T Consensus        39 ~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~  116 (259)
T d1xnfa_          39 LLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELD-PTYNYAHLNRGIALY  116 (259)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHhhccCCC-CHHHHhhhchHHHHHHHHHHhhhhhhHHHHHH-hhhhhhHHHHHHHHH
Confidence            4555555666666666666666666554322 45566666666666666666666666665543 224455556666666


Q ss_pred             HcCCHHHHHHHHHHHHHC
Q 010459          256 CAGLLKRMEGTYKSMLTK  273 (510)
Q Consensus       256 ~~g~~~~A~~~~~~m~~~  273 (510)
                      ..|++++|.+.|+...+.
T Consensus       117 ~~g~~~~A~~~~~~al~~  134 (259)
T d1xnfa_         117 YGGRDKLAQDDLLAFYQD  134 (259)
T ss_dssp             HTTCHHHHHHHHHHHHHH
T ss_pred             HHhhHHHHHHHHHHHHhh
Confidence            666666666666666554


No 12 
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.80  E-value=4.7e-08  Score=90.52  Aligned_cols=219  Identities=11%  Similarity=-0.068  Sum_probs=103.0

Q ss_pred             hHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccC--CHHHHHHHHHHHHhCCCCCCHHHHHHHH-HHHHHcCCHHHHHHH
Q 010459          190 FNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYK--MYDEIDMCLKMMKLDGCSPDHITYNLLI-QEFACAGLLKRMEGT  266 (510)
Q Consensus       190 ~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g--~~~~a~~~~~~m~~~g~~~~~~~~~~li-~~~~~~g~~~~A~~~  266 (510)
                      +++|+.+++...+...+ +...|..+...+...+  ++++|...+++..+.. +++...|...+ ..+...+.+++|+..
T Consensus        89 ~~~al~~~~~~l~~~pk-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~Al~~  166 (334)
T d1dcea1          89 VKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEAD-ERNFHCWDYRRFVAAQAAVAPAEELAF  166 (334)
T ss_dssp             HHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCC-cHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhC-chhhhhhhhHHHHHHHhccccHHHHHH
Confidence            44555555555443221 3444444444444433  2455555555554432 22344433322 344445555555555


Q ss_pred             HHHHHHCCCccCHHHHHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhcchhHHHHHHHHHHhhcCC
Q 010459          267 YKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEKFYKRLLNSRTPLKEDLVRKLAEVYIKNYMFSRLDDLGDDLASRIGR  346 (510)
Q Consensus       267 ~~~m~~~g~~p~~~t~~~ll~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~  346 (510)
                      ++...+.... +...|..+...+...|++++|...+....+..  |   ....+...+...+..+++...+.......+.
T Consensus       167 ~~~~i~~~p~-~~~a~~~l~~~~~~~~~~~~A~~~~~~~~~~~--~---~~~~~~~~~~~l~~~~~a~~~~~~~l~~~~~  240 (334)
T d1dcea1         167 TDSLITRNFS-NYSSWHYRSCLLPQLHPQPDSGPQGRLPENVL--L---KELELVQNAFFTDPNDQSAWFYHRWLLGRAE  240 (334)
T ss_dssp             HHTTTTTTCC-CHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHH--H---HHHHHHHHHHHHCSSCSHHHHHHHHHHSCCC
T ss_pred             HHHHHHcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHhHHhH--H---HHHHHHHHHHHhcchhHHHHHHHHHHHhCcc
Confidence            5555544322 44455555555555555544433322211110  0   0011112222333333444333333333344


Q ss_pred             chHHHHHHHHHhhhhcccccHHHHHHHHHHCCCCcCHHHHHHHHHHHHcCCChhHHHHHHHhhhhCCCCCCHH
Q 010459          347 TELVWCLRLLSHACLLSHRGIDSVVREMESAKVRWNVTTANIILLAYLKMKDFKHLRVLLSELPTRHVKPDIV  419 (510)
Q Consensus       347 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~p~~~  419 (510)
                      ....+..+...+...++.++|.+.+.+..+..+. +..+|..+...|.+.|+.++|.+.|+...+  +.|+..
T Consensus       241 ~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~p~-~~~~~~~l~~~~~~~~~~~eA~~~~~~ai~--ldP~~~  310 (334)
T d1dcea1         241 PLFRCELSVEKSTVLQSELESCKELQELEPENKW-CLLTIILLMRALDPLLYEKETLQYFSTLKA--VDPMRA  310 (334)
T ss_dssp             CSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHCTGGGHHHHHHHHHHHHH--HCGGGH
T ss_pred             hhhHHHHHHHHHHHHhhHHHHHHHHHHHHhhCch-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHH--HCcccH
Confidence            4444444445555556666666666665554332 445666666677777777777777777765  346443


No 13 
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.77  E-value=7.2e-08  Score=89.22  Aligned_cols=274  Identities=9%  Similarity=-0.069  Sum_probs=196.4

Q ss_pred             HHHHHHHhcCCCCcHHHHHHHHHhhcCCCCCH-HHHHHHHHH----------HHhcCCHHHHHHHHHHHHhCCCCCCHHH
Q 010459          108 AVIRFLKNSSRSRQIPQVFDMWKNIEKSRINE-FNSQKIIGM----------LCEEGLMEEAVRAFQEMEGFALKPSLEI  176 (510)
Q Consensus       108 ~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~-~~~~~li~~----------~~~~g~~~~A~~~~~~m~~~g~~~~~~~  176 (510)
                      .++.........++|+++++...+.   .|+. ..|+..-..          +...|++++|+..|+...+.. +.+...
T Consensus        34 ~~~~~~~~~~~~~~al~~~~~~l~~---~P~~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~-pk~~~~  109 (334)
T d1dcea1          34 AVFQKRQAGELDESVLELTSQILGA---NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVN-PKSYGT  109 (334)
T ss_dssp             HHHHHHHTTCCSHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHC-TTCHHH
T ss_pred             HHHHHHhcccccHHHHHHHHHHHHH---CCCcHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhC-CCcHHH
Confidence            3333333344457999999988752   3443 445432222          233456889999999988764 447888


Q ss_pred             HHHHHHHHHhcCC--hHHHHHHHHHHHHCCCCCCHHHHH-HHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 010459          177 YNSIIHGYSKIGK--FNEALLFLNEMKEMNLSPQSDTYD-GLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQE  253 (510)
Q Consensus       177 ~~~li~~~~~~g~--~~~a~~~~~~m~~~g~~p~~~t~~-~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~  253 (510)
                      |..+..++...++  +++|+..+.++.+.... +...+. .....+...+..++|...++...+.. +-+...|+.+-..
T Consensus       110 ~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~~~-p~~~~a~~~l~~~  187 (334)
T d1dcea1         110 WHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRN-FSNYSSWHYRSCL  187 (334)
T ss_dssp             HHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTT-CCCHHHHHHHHHH
T ss_pred             HHHhhHHHHHhccccHHHHHHHHHHHHhhCch-hhhhhhhHHHHHHHhccccHHHHHHHHHHHHcC-CCCHHHHHHHHHH
Confidence            9888888877664  78999999999886432 555554 44467778899999999999998876 4578899999999


Q ss_pred             HHHcCCHHHHHHHHHHHHHCCCccCHHHHHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhcchhHH
Q 010459          254 FACAGLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEKFYKRLLNSRTPLKEDLVRKLAEVYIKNYMFSRL  333 (510)
Q Consensus       254 ~~~~g~~~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~~~~li~~~~~~~~~~~a  333 (510)
                      +.+.|++++|...+......  .|+   .......+...+..+++...+....... +++...+..+...+...++..++
T Consensus       188 ~~~~~~~~~A~~~~~~~~~~--~~~---~~~~~~~~~~l~~~~~a~~~~~~~l~~~-~~~~~~~~~l~~~~~~~~~~~~a  261 (334)
T d1dcea1         188 LPQLHPQPDSGPQGRLPENV--LLK---ELELVQNAFFTDPNDQSAWFYHRWLLGR-AEPLFRCELSVEKSTVLQSELES  261 (334)
T ss_dssp             HHHHSCCCCSSSCCSSCHHH--HHH---HHHHHHHHHHHCSSCSHHHHHHHHHHSC-CCCSSSCCCCHHHHHHHHHHHHH
T ss_pred             HHHhcCHHHHHHHHHHhHHh--HHH---HHHHHHHHHHhcchhHHHHHHHHHHHhC-cchhhHHHHHHHHHHHHhhHHHH
Confidence            99999998887666544332  111   1223344566677788888888777654 34444556667777788899999


Q ss_pred             HHHHHHHHhhcCCchHHHHHHHHHhhhhcccccHHHHHHHHHHCCCCcCHHHHHHHHHHHH
Q 010459          334 DDLGDDLASRIGRTELVWCLRLLSHACLLSHRGIDSVVREMESAKVRWNVTTANIILLAYL  394 (510)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~~~~~li~~~~  394 (510)
                      ...+.......+.+...|..+...+...|+.++|.+.|++..+..+. +...|..|...+.
T Consensus       262 ~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~eA~~~~~~ai~ldP~-~~~y~~~L~~~~~  321 (334)
T d1dcea1         262 CKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPM-RAAYLDDLRSKFL  321 (334)
T ss_dssp             HHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGG-GHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHh
Confidence            99888888888888899999999999999999999999999886432 4556666654443


No 14 
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=98.72  E-value=3e-07  Score=81.33  Aligned_cols=129  Identities=12%  Similarity=-0.072  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q 010459          141 NSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYG  220 (510)
Q Consensus       141 ~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~  220 (510)
                      +|..+-..|.+.|++++|+..|++..+.. +-+..+|+.+..+|.+.|++++|++.|++..+.... +..++..+...|.
T Consensus        39 ~~~~~G~~y~~~g~~~~A~~~~~~al~l~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~  116 (259)
T d1xnfa_          39 LLYERGVLYDSLGLRALARNDFSQALAIR-PDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALY  116 (259)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHhhccC-CCCHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhh-hhhhHHHHHHHHH
Confidence            34444555566666666666666665543 224556666666666666666666666666554322 3445555666666


Q ss_pred             ccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010459          221 KYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLT  272 (510)
Q Consensus       221 ~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~  272 (510)
                      ..|++++|...|+...+.. +.+......+..++.+.+..+.+..+......
T Consensus       117 ~~g~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (259)
T d1xnfa_         117 YGGRDKLAQDDLLAFYQDD-PNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEK  167 (259)
T ss_dssp             HTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             HHhhHHHHHHHHHHHHhhc-cccHHHHHHHHHHHHHhhhHHHHHHHHHHhhc
Confidence            6666666666666655443 22333333333344444444444444444433


No 15 
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.39  E-value=7.7e-06  Score=68.38  Aligned_cols=124  Identities=15%  Similarity=0.042  Sum_probs=81.6

Q ss_pred             HHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHH
Q 010459          148 MLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDE  227 (510)
Q Consensus       148 ~~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~  227 (510)
                      .+...|+++.|++.|+++.    +|+..+|..+-..|...|++++|++.|++.++.+.. +...|..+-.+|.+.|++++
T Consensus        14 ~~~~~~d~~~Al~~~~~i~----~~~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~-~~~a~~~~g~~~~~~g~~~~   88 (192)
T d1hh8a_          14 LAADKKDWKGALDAFSAVQ----DPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDL   88 (192)
T ss_dssp             HHHHTTCHHHHHHHHHTSS----SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHCCCHHHHHHHHHhcC----CCCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHhhccHHH
Confidence            4456677777777777653    566777777777777777777777777777765432 56677777777777777777


Q ss_pred             HHHHHHHHHhCC------------CC--C-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCc
Q 010459          228 IDMCLKMMKLDG------------CS--P-DHITYNLLIQEFACAGLLKRMEGTYKSMLTKRMH  276 (510)
Q Consensus       228 a~~~~~~m~~~g------------~~--~-~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~  276 (510)
                      |...|++.....            ..  + ...++..+-.++.+.|++++|.+.|.........
T Consensus        89 A~~~~~kAl~~~~~n~~~~~~~~~~~~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~  152 (192)
T d1hh8a_          89 AIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSE  152 (192)
T ss_dssp             HHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS
T ss_pred             HHHHHHHHHHhCccCchHHHHHhhhhcccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence            777777765321            00  0 0234445556677777777777777776655443


No 16 
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.24  E-value=4.2e-05  Score=63.67  Aligned_cols=133  Identities=12%  Similarity=0.012  Sum_probs=106.5

Q ss_pred             HHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHH
Q 010459          176 IYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFA  255 (510)
Q Consensus       176 ~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~  255 (510)
                      .|+- ...+...|+++.|++.|+++    ..|+..+|..+-..|.+.|++++|.+.|++..+.. +.+...|..+-.+|.
T Consensus         8 l~~~-g~~~~~~~d~~~Al~~~~~i----~~~~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ld-p~~~~a~~~~g~~~~   81 (192)
T d1hh8a_           8 LWNE-GVLAADKKDWKGALDAFSAV----QDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRD-KHLAVAYFQRGMLYY   81 (192)
T ss_dssp             HHHH-HHHHHHTTCHHHHHHHHHTS----SSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHCCCHHHHHHHHHhc----CCCCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHh-hhhhhhHHHHHHHHH
Confidence            3443 44567899999999999865    45788899999999999999999999999998876 457889999999999


Q ss_pred             HcCCHHHHHHHHHHHHHCC--------------CccC-HHHHHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCH
Q 010459          256 CAGLLKRMEGTYKSMLTKR--------------MHLR-SSTMVAILDAYMNFGMLDKMEKFYKRLLNSRTPLKE  314 (510)
Q Consensus       256 ~~g~~~~A~~~~~~m~~~g--------------~~p~-~~t~~~ll~~~~~~g~~~~a~~~~~~m~~~~~~~~~  314 (510)
                      +.|++++|++.|++.....              ..++ ..++..+-.++...|++++|.+.+....+....++.
T Consensus        82 ~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~~~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~~~  155 (192)
T d1hh8a_          82 QTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH  155 (192)
T ss_dssp             HTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred             hhccHHHHHHHHHHHHHhCccCchHHHHHhhhhcccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcch
Confidence            9999999999999876421              1111 245666777889999999999999988876555433


No 17 
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.23  E-value=1.8e-05  Score=70.88  Aligned_cols=169  Identities=6%  Similarity=-0.125  Sum_probs=97.9

Q ss_pred             hHHHHHHHHHhcCCCCcHHHHHHHHHhhc---CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCC-CC----HH
Q 010459          105 HFWAVIRFLKNSSRSRQIPQVFDMWKNIE---KSRI-NEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFALK-PS----LE  175 (510)
Q Consensus       105 ~~~~ll~~~~~~g~~~~a~~~~~~~~~~~---~~~~-~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~-~~----~~  175 (510)
                      .|.-....|...|++++|.+.|.......   +.++ -..+|+.+..+|.+.|++++|.+.+++..+.-.. .+    ..
T Consensus        39 ~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~  118 (290)
T d1qqea_          39 LCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGAN  118 (290)
T ss_dssp             HHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             HHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHH
Confidence            45566677778888888888887665421   1111 1246777777787888888887777765432100 11    33


Q ss_pred             HHHHHHHHHH-hcCChHHHHHHHHHHHH----CCCCC-CHHHHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCH-----
Q 010459          176 IYNSIIHGYS-KIGKFNEALLFLNEMKE----MNLSP-QSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDH-----  244 (510)
Q Consensus       176 ~~~~li~~~~-~~g~~~~a~~~~~~m~~----~g~~p-~~~t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~-----  244 (510)
                      ++..+...|- ..|++++|++.|++..+    .+-.+ -..++..+...|.+.|++++|...|++..........     
T Consensus       119 ~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~~~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~~~~~~~~  198 (290)
T d1qqea_         119 FKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSL  198 (290)
T ss_dssp             HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGH
T ss_pred             HHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccchhhhhhH
Confidence            4555555553 35777777777766543    11111 1234566677777777777777777776554211110     


Q ss_pred             -HHHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010459          245 -ITYNLLIQEFACAGLLKRMEGTYKSMLTK  273 (510)
Q Consensus       245 -~~~~~li~~~~~~g~~~~A~~~~~~m~~~  273 (510)
                       ..+...+..+...|+++.|...+++..+.
T Consensus       199 ~~~~~~~~~~~l~~~d~~~A~~~~~~~~~~  228 (290)
T d1qqea_         199 KDYFLKKGLCQLAATDAVAAARTLQEGQSE  228 (290)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHGGGCC
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence             11233444556667777777777766544


No 18 
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.16  E-value=4.9e-05  Score=67.99  Aligned_cols=90  Identities=11%  Similarity=-0.005  Sum_probs=42.4

Q ss_pred             HHHHccCCHHHHHHHHHHHHhC----CCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----CCCc-cCHHHHHHHH
Q 010459          217 QAYGKYKMYDEIDMCLKMMKLD----GCSP-DHITYNLLIQEFACAGLLKRMEGTYKSMLT----KRMH-LRSSTMVAIL  286 (510)
Q Consensus       217 ~~~~~~g~~~~a~~~~~~m~~~----g~~~-~~~~~~~li~~~~~~g~~~~A~~~~~~m~~----~g~~-p~~~t~~~ll  286 (510)
                      ..|...|++++|...|.+..+.    +-++ -..+|..+...|.+.|++++|.+.+++..+    .|.. ....++..+.
T Consensus        45 ~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~  124 (290)
T d1qqea_          45 TIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELG  124 (290)
T ss_dssp             HHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             HHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHH
Confidence            3455555555555555554321    1011 123455555566666666666666554432    1110 1123344444


Q ss_pred             HHHHh-cCChhHHHHHHHHHH
Q 010459          287 DAYMN-FGMLDKMEKFYKRLL  306 (510)
Q Consensus       287 ~~~~~-~g~~~~a~~~~~~m~  306 (510)
                      ..|.. .|++++|.+.+.+..
T Consensus       125 ~~~~~~~~~~~~A~~~~~~A~  145 (290)
T d1qqea_         125 EILENDLHDYAKAIDCYELAG  145 (290)
T ss_dssp             HHHHHTTCCHHHHHHHHHHHH
T ss_pred             HhHhhHHHHHHHHHHHHHHHH
Confidence            44432 466666666665543


No 19 
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.10  E-value=4.9e-05  Score=57.49  Aligned_cols=89  Identities=12%  Similarity=0.141  Sum_probs=46.8

Q ss_pred             HHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHH
Q 010459          148 MLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDE  227 (510)
Q Consensus       148 ~~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~  227 (510)
                      .+.+.|++++|+..|++..+.. +.+...|..+-.+|.+.|++++|++.+....+.+.. +...|..+..++...|++++
T Consensus        12 ~~~~~g~~~eAi~~~~~al~~~-p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~   89 (117)
T d1elwa_          12 KALSVGNIDDALQCYSEAIKLD-PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEE   89 (117)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHcCCHHHHHHHHHHHHhcC-CcchhhhhcccccccccccccccchhhhhHHHhccc-hhhHHHHHHHHHHHccCHHH
Confidence            3445555555555555555443 224445555555555555555555555555544322 44555555555555555555


Q ss_pred             HHHHHHHHHhC
Q 010459          228 IDMCLKMMKLD  238 (510)
Q Consensus       228 a~~~~~~m~~~  238 (510)
                      |...|++..+.
T Consensus        90 A~~~~~~a~~~  100 (117)
T d1elwa_          90 AKRTYEEGLKH  100 (117)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHHHHHh
Confidence            55555555543


No 20 
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.07  E-value=8.8e-05  Score=59.52  Aligned_cols=91  Identities=9%  Similarity=-0.017  Sum_probs=59.1

Q ss_pred             HHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCH
Q 010459          146 IGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMY  225 (510)
Q Consensus       146 i~~~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~  225 (510)
                      -..|.+.|++++|+..|++..+.. +.+...|..+...|.+.|++++|.+.|+..++.... +..+|..+..+|...|++
T Consensus        17 gn~~~~~~~y~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~-~~~a~~~~g~~~~~~g~~   94 (159)
T d1a17a_          17 ANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKF   94 (159)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCH
T ss_pred             HHHHHHcCCHHHHHHHhhhccccc-hhhhhhhhhhHHHHHhccccchHHHHHHHHHHHccc-chHHHHHHHHHHHHcCCH
Confidence            345566777777777777766654 235666666667777777777777777776664322 445666666777777777


Q ss_pred             HHHHHHHHHHHhC
Q 010459          226 DEIDMCLKMMKLD  238 (510)
Q Consensus       226 ~~a~~~~~~m~~~  238 (510)
                      ++|...|++..+.
T Consensus        95 ~eA~~~~~~a~~~  107 (159)
T d1a17a_          95 RAALRDYETVVKV  107 (159)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHc
Confidence            7777777766654


No 21 
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.06  E-value=6.8e-05  Score=56.64  Aligned_cols=91  Identities=14%  Similarity=0.055  Sum_probs=57.6

Q ss_pred             HHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCH
Q 010459          181 IHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLL  260 (510)
Q Consensus       181 i~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~  260 (510)
                      ...+.+.|++++|+..|++..+.... +...|..+-.+|.+.|++++|...++...+.. +.+...|..+..++...|++
T Consensus        10 g~~~~~~g~~~eAi~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~g~~~~~~~~~   87 (117)
T d1elwa_          10 GNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLK-PDWGKGYSRKAAALEFLNRF   87 (117)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCH
T ss_pred             HHHHHHcCCHHHHHHHHHHHHhcCCc-chhhhhcccccccccccccccchhhhhHHHhc-cchhhHHHHHHHHHHHccCH
Confidence            34455666677777777666654322 55566666666666666666666666666554 34566666666666666666


Q ss_pred             HHHHHHHHHHHHC
Q 010459          261 KRMEGTYKSMLTK  273 (510)
Q Consensus       261 ~~A~~~~~~m~~~  273 (510)
                      ++|+..|+...+.
T Consensus        88 ~~A~~~~~~a~~~  100 (117)
T d1elwa_          88 EEAKRTYEEGLKH  100 (117)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHh
Confidence            6666666666644


No 22 
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.01  E-value=5.4e-05  Score=63.28  Aligned_cols=98  Identities=11%  Similarity=-0.105  Sum_probs=46.1

Q ss_pred             CCHHHHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHH
Q 010459          172 PSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLI  251 (510)
Q Consensus       172 ~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li  251 (510)
                      |+...+-.....|.+.|++++|+..|++..+... -+...|..+..+|.+.|++++|...|++..+.. +-+..+|..+-
T Consensus         2 ~~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p-~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~-p~~~~a~~~lg   79 (201)
T d2c2la1           2 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNP-LVAVYYTNRALCYLKMQQPEQALADCRRALELD-GQSVKAHFFLG   79 (201)
T ss_dssp             CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC-TTCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhC-CCcHHHHHHHH
Confidence            3344444444445555555555555554444321 144444445555555555555555555544332 12344455555


Q ss_pred             HHHHHcCCHHHHHHHHHHHH
Q 010459          252 QEFACAGLLKRMEGTYKSML  271 (510)
Q Consensus       252 ~~~~~~g~~~~A~~~~~~m~  271 (510)
                      .+|.+.|++++|+..|++..
T Consensus        80 ~~~~~l~~~~~A~~~~~~al   99 (201)
T d2c2la1          80 QCQLEMESYDEAIANLQRAY   99 (201)
T ss_dssp             HHHHHTTCHHHHHHHHHHHH
T ss_pred             HHHHHCCCHHHHHHHHHHHH
Confidence            55555555555555554443


No 23 
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.98  E-value=0.00015  Score=58.00  Aligned_cols=93  Identities=15%  Similarity=0.097  Sum_probs=66.5

Q ss_pred             HHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCC
Q 010459          180 IIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGL  259 (510)
Q Consensus       180 li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~  259 (510)
                      ....|.+.|++++|+..|++..+.... +...|..+...|.+.|++++|...|++..+.. +-+..+|..+..+|...|+
T Consensus        16 ~gn~~~~~~~y~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~-p~~~~a~~~~g~~~~~~g~   93 (159)
T d1a17a_          16 QANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELD-KKYIKGYYRRAASNMALGK   93 (159)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHcCCHHHHHHHhhhccccchh-hhhhhhhhHHHHHhccccchHHHHHHHHHHHc-ccchHHHHHHHHHHHHcCC
Confidence            344566777888888888777775432 66677777777777777888777777776654 3456677777777777777


Q ss_pred             HHHHHHHHHHHHHCC
Q 010459          260 LKRMEGTYKSMLTKR  274 (510)
Q Consensus       260 ~~~A~~~~~~m~~~g  274 (510)
                      +++|.+.|++.....
T Consensus        94 ~~eA~~~~~~a~~~~  108 (159)
T d1a17a_          94 FRAALRDYETVVKVK  108 (159)
T ss_dssp             HHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHcC
Confidence            777777777777653


No 24 
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.96  E-value=7.6e-05  Score=62.35  Aligned_cols=100  Identities=9%  Similarity=0.005  Sum_probs=85.3

Q ss_pred             CCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCccCHHHHHHH
Q 010459          206 SPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLTKRMHLRSSTMVAI  285 (510)
Q Consensus       206 ~p~~~t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~p~~~t~~~l  285 (510)
                      .|+...+...-..|.+.|++++|...|++..+.. +.+...|+.+-.+|.+.|++++|+..|+...+.... +..+|..+
T Consensus         1 ~~~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~-p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~-~~~a~~~l   78 (201)
T d2c2la1           1 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFL   78 (201)
T ss_dssp             CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCC-cHHHHHHH
Confidence            3677778888889999999999999999887765 457888999999999999999999999998865322 57788899


Q ss_pred             HHHHHhcCChhHHHHHHHHHHh
Q 010459          286 LDAYMNFGMLDKMEKFYKRLLN  307 (510)
Q Consensus       286 l~~~~~~g~~~~a~~~~~~m~~  307 (510)
                      ..+|...|++++|...|+...+
T Consensus        79 g~~~~~l~~~~~A~~~~~~al~  100 (201)
T d2c2la1          79 GQCQLEMESYDEAIANLQRAYS  100 (201)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHHHHHH
Confidence            9999999999999999988765


No 25 
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=97.83  E-value=0.0001  Score=55.17  Aligned_cols=84  Identities=14%  Similarity=0.048  Sum_probs=36.1

Q ss_pred             HHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHH
Q 010459          149 LCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEI  228 (510)
Q Consensus       149 ~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a  228 (510)
                      +.+.|++++|+..|++..+... -+...|..+..++.+.|++++|+..|++..+.... +..+|..+...|...|++++|
T Consensus        26 ~~~~g~~~~A~~~~~~al~~~p-~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~la~~y~~~g~~~~A  103 (112)
T d1hxia_          26 MLKLANLAEAALAFEAVCQKEP-EREEAWRSLGLTQAENEKDGLAIIALNHARMLDPK-DIAVHAALAVSHTNEHNANAA  103 (112)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhHHHHHHHhhhccccc-ccchhhhhhhhhhhhhhhHHHhhcccccccccccc-cccchHHHHHHHHHCCCHHHH
Confidence            3344444444444444443321 13444444444444444444444444444432211 334444444444444444444


Q ss_pred             HHHHHH
Q 010459          229 DMCLKM  234 (510)
Q Consensus       229 ~~~~~~  234 (510)
                      .+.|++
T Consensus       104 ~~~l~~  109 (112)
T d1hxia_         104 LASLRA  109 (112)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            444443


No 26 
>d1b89a_ a.118.1.3 (A:) Clathrin heavy chain proximal leg segment {Cow (Bos taurus) [TaxId: 9913]}
Probab=97.81  E-value=0.01  Score=53.07  Aligned_cols=294  Identities=10%  Similarity=0.047  Sum_probs=165.6

Q ss_pred             CChhhHHHHHHHHHhcCCCCcHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHH
Q 010459          101 WTKDHFWAVIRFLKNSSRSRQIPQVFDMWKNIEKSRINEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSI  180 (510)
Q Consensus       101 ~~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~l  180 (510)
                      ||..--..+.+-|.+.|.++.|..+|..+.          -|..++..|.+.++++.|.+++....      +..+|..+
T Consensus        12 ~n~~d~~~i~~~c~~~~lye~A~~lY~~~~----------d~~rl~~~~v~l~~~~~avd~~~k~~------~~~~~k~~   75 (336)
T d1b89a_          12 PNNAHIQQVGDRCYDEKMYDAAKLLYNNVS----------NFGRLASTLVHLGEYQAAVDGARKAN------STRTWKEV   75 (336)
T ss_dssp             C----------------CTTTHHHHHHHTT----------CHHHHHHHHHTTTCHHHHHHHHHHHT------CHHHHHHH
T ss_pred             CCcCCHHHHHHHHHHCCCHHHHHHHHHhCC----------CHHHHHHHHHhhccHHHHHHHHHHcC------CHHHHHHH
Confidence            333444578888999999999999998654          36778899999999999999887653      67899999


Q ss_pred             HHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCH
Q 010459          181 IHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLL  260 (510)
Q Consensus       181 i~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~  260 (510)
                      ...+.+.....-|     .+.......+......++..|-..|..++...+++...... .++...++-++..|++.+ .
T Consensus        76 ~~~l~~~~e~~la-----~i~~~~~~~~~d~l~~~v~~ye~~~~~e~Li~~Le~~~~~~-~~~~~~~~~L~~lyak~~-~  148 (336)
T d1b89a_          76 CFACVDGKEFRLA-----QMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLE-RAHMGMFTELAILYSKFK-P  148 (336)
T ss_dssp             HHHHHHTTCHHHH-----HHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTST-TCCHHHHHHHHHHHHTTC-H
T ss_pred             HHHHHhCcHHHHH-----HHHHHHhhcCHHHHHHHHHHHHHcCChHHHHHHHHHHHcCC-ccchHHHHHHHHHHHHhC-h
Confidence            9999988766543     23344455577777889999999999999999999876432 567788899999998875 4


Q ss_pred             HHHHHHHHHHHHCCCccCHHHHHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 010459          261 KRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEKFYKRLLNSRTPLKEDLVRKLAEVYIKNYMFSRLDDLGDDL  340 (510)
Q Consensus       261 ~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~  340 (510)
                      ++-.+.++...   -.   .-..-++..|-..+-+.++.-++..+-+.        -+++..++.......+........
T Consensus       149 ~kl~e~l~~~s---~~---y~~~k~~~~c~~~~l~~elv~Ly~~~~~~--------~~A~~~~i~~~~~~~~~~~f~e~~  214 (336)
T d1b89a_         149 QKMREHLELFW---SR---VNIPKVLRAAEQAHLWAELVFLYDKYEEY--------DNAIITMMNHPTDAWKEGQFKDII  214 (336)
T ss_dssp             HHHHHHHHHHS---TT---SCHHHHHHHHHTTTCHHHHHHHHHHTTCH--------HHHHHHHHHSTTTTCCHHHHHHHH
T ss_pred             HHHHHHHHhcc---cc---CCHHHHHHHHHHcCChHHHHHHHHhcCCH--------HHHHHHHHHcchhhhhHHHHHHHH
Confidence            44444443331   11   22234556676666666666555543211        011111111111110111110001


Q ss_pred             HhhcCCchHHHHHHHHHhhhhcccccHHHHHHHHHHCCCCcCHHHHHHHHHHHHcCCChhHHHHHHHhhhhCCCCCCHHH
Q 010459          341 ASRIGRTELVWCLRLLSHACLLSHRGIDSVVREMESAKVRWNVTTANIILLAYLKMKDFKHLRVLLSELPTRHVKPDIVT  420 (510)
Q Consensus       341 ~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~p~~~t  420 (510)
                      ..  ..++..|...+..|... +++-...++..+... +  |.   .-++.-+-+.++.......++...+.|   +...
T Consensus       215 ~k--~~N~e~~~~~i~~yL~~-~p~~i~~lL~~v~~~-~--d~---~r~V~~~~k~~~l~li~p~Le~v~~~n---~~~v  282 (336)
T d1b89a_         215 TK--VANVELYYRAIQFYLEF-KPLLLNDLLMVLSPR-L--DH---TRAVNYFSKVKQLPLVKPYLRSVQNHN---NKSV  282 (336)
T ss_dssp             HH--CSSTHHHHHHHHHHHHH-CGGGHHHHHHHHGGG-C--CH---HHHHHHHHHTTCTTTTHHHHHHHHTTC---CHHH
T ss_pred             Hc--cCChHHHHHHHHHHHHc-CHHHHHHHHHHhccC-C--CH---HHHHHHHHhcCCcHHHHHHHHHHHHcC---hHHH
Confidence            11  12334444445444432 233333444433332 1  11   345555666777777777776665554   3456


Q ss_pred             HHHHHHhhhhcCccchHHHHHHH
Q 010459          421 IGILYDARRIGFDGTGALEMWKR  443 (510)
Q Consensus       421 ~~~li~~~~~~~~~~~a~~~~~~  443 (510)
                      .+++...|...++++.-...++.
T Consensus       283 n~al~~lyie~~d~~~l~~~i~~  305 (336)
T d1b89a_         283 NESLNNLFITEEDYQALRTSIDA  305 (336)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred             HHHHHHHHhCcchhHHHHHHHHH
Confidence            77777777777776555444443


No 27 
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=97.78  E-value=0.00011  Score=54.98  Aligned_cols=85  Identities=11%  Similarity=-0.018  Sum_probs=38.4

Q ss_pred             HHHhcCCCCcHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCChH
Q 010459          112 FLKNSSRSRQIPQVFDMWKNIEKSRINEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFN  191 (510)
Q Consensus       112 ~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~  191 (510)
                      .+.+.|++++|...|+...+.  .+-+...|..+-.+|.+.|++++|+..|+...+.. +.+..+|..+...|...|+.+
T Consensus        25 ~~~~~g~~~~A~~~~~~al~~--~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~a~~~la~~y~~~g~~~  101 (112)
T d1hxia_          25 SMLKLANLAEAALAFEAVCQK--EPEREEAWRSLGLTQAENEKDGLAIIALNHARMLD-PKDIAVHAALAVSHTNEHNAN  101 (112)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhHHHHHHHhhhccc--ccccchhhhhhhhhhhhhhhHHHhhcccccccccc-cccccchHHHHHHHHHCCCHH
Confidence            344444555555555444431  11234444444444444555555555554444432 123444444444455555555


Q ss_pred             HHHHHHHH
Q 010459          192 EALLFLNE  199 (510)
Q Consensus       192 ~a~~~~~~  199 (510)
                      +|++.|++
T Consensus       102 ~A~~~l~~  109 (112)
T d1hxia_         102 AALASLRA  109 (112)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            55444444


No 28 
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.76  E-value=9.4e-05  Score=56.20  Aligned_cols=105  Identities=6%  Similarity=-0.069  Sum_probs=68.1

Q ss_pred             HHHHHHhhcchhHHHHHHHHHHhhcCCchHHHHHHHHHhhh---hcccccHHHHHHHHHHCCCCcCH-HHHHHHHHHHHc
Q 010459          320 LAEVYIKNYMFSRLDDLGDDLASRIGRTELVWCLRLLSHAC---LLSHRGIDSVVREMESAKVRWNV-TTANIILLAYLK  395 (510)
Q Consensus       320 li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~li~~~~~---~~~~~~a~~~~~~m~~~g~~p~~-~~~~~li~~~~~  395 (510)
                      |+..+...+++++|.+.++......+.++.++..+..++..   .++.++|+++|++..+.+..|+. .+|..+..+|.+
T Consensus         5 l~n~~~~~~~l~~Ae~~Y~~aL~~~p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y~~   84 (122)
T d1nzna_           5 VLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR   84 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHH
Confidence            44444445555555555555555555555555555555543   33446688889988877655543 467778889999


Q ss_pred             CCChhHHHHHHHhhhhCCCCCCHHHHHHHHH
Q 010459          396 MKDFKHLRVLLSELPTRHVKPDIVTIGILYD  426 (510)
Q Consensus       396 ~g~~~~A~~~~~~m~~~g~~p~~~t~~~li~  426 (510)
                      .|++++|.+.|++..+  +.|+......+..
T Consensus        85 ~g~~~~A~~~~~~aL~--~~P~~~~A~~l~~  113 (122)
T d1nzna_          85 LKEYEKALKYVRGLLQ--TEPQNNQAKELER  113 (122)
T ss_dssp             TTCHHHHHHHHHHHHH--HCTTCHHHHHHHH
T ss_pred             HhhhHHHHHHHHHHHH--hCcCCHHHHHHHH
Confidence            9999999999999987  4577655444443


No 29 
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.74  E-value=0.00011  Score=55.91  Aligned_cols=92  Identities=11%  Similarity=0.043  Sum_probs=39.2

Q ss_pred             HHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCC---hHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHH
Q 010459          145 IIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGK---FNEALLFLNEMKEMNLSPQ-SDTYDGLIQAYG  220 (510)
Q Consensus       145 li~~~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~---~~~a~~~~~~m~~~g~~p~-~~t~~~li~~~~  220 (510)
                      +++.+...+++++|.+.|+...+.+ +.+..++..+..++.+.++   .++|+++|++....+..|+ ..+|..|-.+|.
T Consensus         5 l~n~~~~~~~l~~Ae~~Y~~aL~~~-p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y~   83 (122)
T d1nzna_           5 VLNELVSVEDLLKFEKKFQSEKAAG-SVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNY   83 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Confidence            3344444444455555554444433 2234444444444443332   2234444444443332222 123344444444


Q ss_pred             ccCCHHHHHHHHHHHHh
Q 010459          221 KYKMYDEIDMCLKMMKL  237 (510)
Q Consensus       221 ~~g~~~~a~~~~~~m~~  237 (510)
                      +.|++++|.+.|++..+
T Consensus        84 ~~g~~~~A~~~~~~aL~  100 (122)
T d1nzna_          84 RLKEYEKALKYVRGLLQ  100 (122)
T ss_dssp             HTTCHHHHHHHHHHHHH
T ss_pred             HHhhhHHHHHHHHHHHH
Confidence            44445444444444443


No 30 
>d1b89a_ a.118.1.3 (A:) Clathrin heavy chain proximal leg segment {Cow (Bos taurus) [TaxId: 9913]}
Probab=97.68  E-value=0.0081  Score=53.75  Aligned_cols=138  Identities=11%  Similarity=0.127  Sum_probs=90.8

Q ss_pred             CCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHH
Q 010459          171 KPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLL  250 (510)
Q Consensus       171 ~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~l  250 (510)
                      .||..--..+.+-|-+.|.++.|..+|..+.         -|..++..|.+.++++.|..++....      +..+|..+
T Consensus        11 ~~n~~d~~~i~~~c~~~~lye~A~~lY~~~~---------d~~rl~~~~v~l~~~~~avd~~~k~~------~~~~~k~~   75 (336)
T d1b89a_          11 GPNNAHIQQVGDRCYDEKMYDAAKLLYNNVS---------NFGRLASTLVHLGEYQAAVDGARKAN------STRTWKEV   75 (336)
T ss_dssp             CC----------------CTTTHHHHHHHTT---------CHHHHHHHHHTTTCHHHHHHHHHHHT------CHHHHHHH
T ss_pred             CCCcCCHHHHHHHHHHCCCHHHHHHHHHhCC---------CHHHHHHHHHhhccHHHHHHHHHHcC------CHHHHHHH
Confidence            4566666677788889999999999998652         35677888888999999888876553      66788888


Q ss_pred             HHHHHHcCCHHHHHHHHHHHHHCCCccCHHHHHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhcc
Q 010459          251 IQEFACAGLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEKFYKRLLNSRTPLKEDLVRKLAEVYIKNYM  329 (510)
Q Consensus       251 i~~~~~~g~~~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~~~~li~~~~~~~~  329 (510)
                      ...+.+......|     .+.......+......++..|-..|..++...+++..... -..+...++-++..|++.+.
T Consensus        76 ~~~l~~~~e~~la-----~i~~~~~~~~~d~l~~~v~~ye~~~~~e~Li~~Le~~~~~-~~~~~~~~~~L~~lyak~~~  148 (336)
T d1b89a_          76 CFACVDGKEFRLA-----QMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGL-ERAHMGMFTELAILYSKFKP  148 (336)
T ss_dssp             HHHHHHTTCHHHH-----HHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS-TTCCHHHHHHHHHHHHTTCH
T ss_pred             HHHHHhCcHHHHH-----HHHHHHhhcCHHHHHHHHHHHHHcCChHHHHHHHHHHHcC-CccchHHHHHHHHHHHHhCh
Confidence            8888888766543     2233334456666778889999999999988888877643 25677788888888888654


No 31 
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]}
Probab=97.52  E-value=0.022  Score=49.01  Aligned_cols=61  Identities=11%  Similarity=0.037  Sum_probs=29.4

Q ss_pred             HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHHCC
Q 010459          141 NSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSK----IGKFNEALLFLNEMKEMN  204 (510)
Q Consensus       141 ~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~----~g~~~~a~~~~~~m~~~g  204 (510)
                      .+..|-..+-+.|++++|++.|++..+.|   |...+..|-..|..    ..+...|...+..-...+
T Consensus         4 ~~~~lG~~~~~~~d~~~A~~~~~kAa~~g---~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~~   68 (265)
T d1ouva_           4 ELVGLGAKSYKEKDFTQAKKYFEKACDLK---ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN   68 (265)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCcchhHHHHHHhhccccccc
Confidence            33444444445555555555555555443   33444444444443    334555555555544443


No 32 
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.51  E-value=0.00097  Score=54.23  Aligned_cols=69  Identities=9%  Similarity=0.045  Sum_probs=40.0

Q ss_pred             HHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH-----HCCCccCHH
Q 010459          211 TYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSML-----TKRMHLRSS  280 (510)
Q Consensus       211 t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~-----~~g~~p~~~  280 (510)
                      .+..+...+.+.|++++|...++++.+.. +-+...|..++.+|.+.|+.++|++.|+++.     +.|+.|...
T Consensus        69 a~~~la~~~~~~g~~~~Al~~~~~al~~~-P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~~~  142 (179)
T d2ff4a2          69 AHTAKAEAEIACGRASAVIAELEALTFEH-PYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPT  142 (179)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHH
T ss_pred             HHHHHHHHHHHCCCchHHHHHHHHHHHhC-CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcCHH
Confidence            44555666666666666666666665543 3455666666666666666666666666543     235555543


No 33 
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.44  E-value=0.003  Score=50.76  Aligned_cols=62  Identities=6%  Similarity=-0.079  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010459          211 TYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLTK  273 (510)
Q Consensus       211 t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~  273 (510)
                      +|+.+..+|.+.|++++|...++...+.. +.++..|..+..+|...|++++|...|+...+.
T Consensus        64 ~~~nla~~y~k~~~~~~A~~~~~~al~~~-p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l  125 (170)
T d1p5qa1          64 SHLNLAMCHLKLQAFSAAIESCNKALELD-SNNEKGLSRRGEAHLAVNDFELARADFQKVLQL  125 (170)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhcccccchhhhhhhcc-ccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence            45556666666666666666666666553 335666666666666666666666666666654


No 34 
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.42  E-value=0.0029  Score=50.83  Aligned_cols=62  Identities=10%  Similarity=-0.044  Sum_probs=32.5

Q ss_pred             HHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhC
Q 010459          176 IYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLD  238 (510)
Q Consensus       176 ~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a~~~~~~m~~~  238 (510)
                      +|+.+..+|.+.|++++|+..++..++.... +..+|..+..+|...|++++|...|++..+.
T Consensus        64 ~~~nla~~y~k~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l  125 (170)
T d1p5qa1          64 SHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQL  125 (170)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhcccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence            3444555555555555555555555543211 4455555555555555555555555555443


No 35 
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.37  E-value=0.0022  Score=52.06  Aligned_cols=72  Identities=13%  Similarity=0.040  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHH-----hCCCCCCHHH
Q 010459          174 LEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMK-----LDGCSPDHIT  246 (510)
Q Consensus       174 ~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a~~~~~~m~-----~~g~~~~~~~  246 (510)
                      ...+..+...+.+.|++++|+..++++.+.... +...|..++.+|.+.|+.++|.+.|+++.     +.|+.|...+
T Consensus        67 ~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~~~l  143 (179)
T d2ff4a2          67 VLAHTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTL  143 (179)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHH
T ss_pred             HHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcCHHH
Confidence            456778888899999999999999998886533 78889999999999999999999998874     3588887655


No 36 
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=97.36  E-value=0.0042  Score=48.81  Aligned_cols=62  Identities=13%  Similarity=-0.026  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010459          211 TYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLTK  273 (510)
Q Consensus       211 t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~  273 (510)
                      +|+.+..+|.+.|++++|...+++..+.. +.+..+|..+..+|...|++++|+..|+...+.
T Consensus        69 ~~~Nla~~~~~l~~~~~Al~~~~~al~~~-p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l  130 (153)
T d2fbna1          69 CNLNLATCYNKNKDYPKAIDHASKVLKID-KNNVKALYKLGVANMYFGFLEEAKENLYKAASL  130 (153)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             HHhhHHHHHHHhcccchhhhhhhcccccc-chhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHh
Confidence            44445555555555555555555554443 334555555555555555555555555555543


No 37 
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.23  E-value=0.0023  Score=48.68  Aligned_cols=89  Identities=10%  Similarity=0.156  Sum_probs=42.5

Q ss_pred             HHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHCCCC-CC-----HHHHHHHHHHHH
Q 010459          147 GMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLS-PQ-----SDTYDGLIQAYG  220 (510)
Q Consensus       147 ~~~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~-p~-----~~t~~~li~~~~  220 (510)
                      ..|.+.|++++|+..|++..+.+ +.+..+|..+-.+|.+.|++++|++.++++++.... ++     ..+|..+-..+.
T Consensus        12 ~~~~~~~~y~~Ai~~y~~al~~~-p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~~~~~lg~~~~   90 (128)
T d1elra_          12 NDAYKKKDFDTALKHYDKAKELD-PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYF   90 (128)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHHHHHhC-cccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHH
Confidence            34455555555555555555443 124455555555555555555555555554432100 00     123444444444


Q ss_pred             ccCCHHHHHHHHHHHH
Q 010459          221 KYKMYDEIDMCLKMMK  236 (510)
Q Consensus       221 ~~g~~~~a~~~~~~m~  236 (510)
                      ..+++++|...|+...
T Consensus        91 ~~~~~~~A~~~~~kal  106 (128)
T d1elra_          91 KEEKYKDAIHFYNKSL  106 (128)
T ss_dssp             HTTCHHHHHHHHHHHH
T ss_pred             HhCCHHHHHHHHHHHH
Confidence            5555555555554443


No 38 
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.21  E-value=0.0039  Score=47.30  Aligned_cols=93  Identities=12%  Similarity=0.037  Sum_probs=48.4

Q ss_pred             HHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCC---c--cC-HHHHHHHHH
Q 010459          214 GLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLTKRM---H--LR-SSTMVAILD  287 (510)
Q Consensus       214 ~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~---~--p~-~~t~~~ll~  287 (510)
                      .+-..|.+.|++++|...|.+..+.. +.+...|..+-.+|.+.|++++|++.+++..+...   .  +. ..+|..+-.
T Consensus         9 ~~G~~~~~~~~y~~Ai~~y~~al~~~-p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~~~~~lg~   87 (128)
T d1elra_           9 ELGNDAYKKKDFDTALKHYDKAKELD-PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGN   87 (128)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHhC-cccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH
Confidence            34445555555666666655555543 23455555555666666666666666655543210   0  00 124445555


Q ss_pred             HHHhcCChhHHHHHHHHHHh
Q 010459          288 AYMNFGMLDKMEKFYKRLLN  307 (510)
Q Consensus       288 ~~~~~g~~~~a~~~~~~m~~  307 (510)
                      .+...+++++|.+.|.....
T Consensus        88 ~~~~~~~~~~A~~~~~kal~  107 (128)
T d1elra_          88 SYFKEEKYKDAIHFYNKSLA  107 (128)
T ss_dssp             HHHHTTCHHHHHHHHHHHHH
T ss_pred             HHHHhCCHHHHHHHHHHHHh
Confidence            55556666666666655543


No 39 
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=97.13  E-value=0.0057  Score=48.89  Aligned_cols=63  Identities=5%  Similarity=-0.204  Sum_probs=37.6

Q ss_pred             HHHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010459          210 DTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLTK  273 (510)
Q Consensus       210 ~t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~  273 (510)
                      ..|..+-.+|.+.|++++|...+++..+.. +.+...|..+-.+|...|++++|++.|+...+.
T Consensus        78 ~~~~nla~~~~~~~~~~~Ai~~~~~al~~~-p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l  140 (169)
T d1ihga1          78 SCVLNIGACKLKMSDWQGAVDSCLEALEID-PSNTKALYRRAQGWQGLKEYDQALADLKKAQEI  140 (169)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcccchhhhhhhhhhhhh-hhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHh
Confidence            344555556666666666666666665543 335556666666666666666666666666554


No 40 
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=97.11  E-value=0.014  Score=45.63  Aligned_cols=24  Identities=13%  Similarity=-0.128  Sum_probs=12.6

Q ss_pred             HHHHHHHHccCCHHHHHHHHHHHH
Q 010459          213 DGLIQAYGKYKMYDEIDMCLKMMK  236 (510)
Q Consensus       213 ~~li~~~~~~g~~~~a~~~~~~m~  236 (510)
                      ..-...+.+.|++.+|...|.+..
T Consensus        21 ~~~G~~~f~~~~y~~A~~~Y~~al   44 (153)
T d2fbna1          21 KEEGNEFFKKNEINEAIVKYKEAL   44 (153)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHH
Confidence            333444555555555555555544


No 41 
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]}
Probab=97.03  E-value=0.078  Score=45.26  Aligned_cols=205  Identities=10%  Similarity=0.027  Sum_probs=139.7

Q ss_pred             ChhhHHHHHHHHHhcCCCCcHHHHHHHHHhhcCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhCCCCCCHHHH
Q 010459          102 TKDHFWAVIRFLKNSSRSRQIPQVFDMWKNIEKSRINEFNSQKIIGMLCE----EGLMEEAVRAFQEMEGFALKPSLEIY  177 (510)
Q Consensus       102 ~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~----~g~~~~A~~~~~~m~~~g~~~~~~~~  177 (510)
                      ||..+..+-..+.+.+++++|.+.|+...+ .|   |...+-.|-.+|..    ..+...|...+....+.+   +...+
T Consensus         1 ~p~~~~~lG~~~~~~~d~~~A~~~~~kAa~-~g---~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~~---~~~a~   73 (265)
T d1ouva_           1 DPKELVGLGAKSYKEKDFTQAKKYFEKACD-LK---ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGC   73 (265)
T ss_dssp             CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-TT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHH
T ss_pred             CHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-CC---CHHHHHHHHHHHHcCCCcchhHHHHHHhhccccccc---ccchh
Confidence            455666777777889999999999998876 43   55566667777776    578999999999988754   44555


Q ss_pred             HHHHHHHHh----cCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHc----cCCHHHHHHHHHHHHhCCCCCCHHHHHH
Q 010459          178 NSIIHGYSK----IGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGK----YKMYDEIDMCLKMMKLDGCSPDHITYNL  249 (510)
Q Consensus       178 ~~li~~~~~----~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~----~g~~~~a~~~~~~m~~~g~~~~~~~~~~  249 (510)
                      ..+...+..    ..+.+.|...++...+.|..   .....+...+..    ......+...+.....   ..+...+..
T Consensus        74 ~~l~~~~~~~~~~~~~~~~a~~~~~~a~~~g~~---~a~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~  147 (265)
T d1ouva_          74 HLLGNLYYSGQGVSQNTNKALQYYSKACDLKYA---EGCASLGGIYHDGKVVTRDFKKAVEYFTKACD---LNDGDGCTI  147 (265)
T ss_dssp             HHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHH---TTCHHHHHH
T ss_pred             hccccccccccccchhhHHHHHHHhhhhhhhhh---hHHHhhcccccCCCcccchhHHHHHHhhhhhc---ccccchhhh
Confidence            555555543    45788999999998887742   333333333332    3456777788877665   356777888


Q ss_pred             HHHHHHH----cCCHHHHHHHHHHHHHCCCccCHHHHHHHHHHHHh----cCChhHHHHHHHHHHhcCCCCCHHHHHHHH
Q 010459          250 LIQEFAC----AGLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMN----FGMLDKMEKFYKRLLNSRTPLKEDLVRKLA  321 (510)
Q Consensus       250 li~~~~~----~g~~~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~----~g~~~~a~~~~~~m~~~~~~~~~~~~~~li  321 (510)
                      +...|..    ..+...+...++...+.|   +......+-..|..    ..+.++|.++|....+.|   ++..+..|-
T Consensus       148 L~~~~~~~~~~~~~~~~~~~~~~~a~~~g---~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~g---~~~a~~~LG  221 (265)
T d1ouva_         148 LGSLYDAGRGTPKDLKKALASYDKACDLK---DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELE---NGGGCFNLG  221 (265)
T ss_dssp             HHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTT---CHHHHHHHH
T ss_pred             hhhhhccCCCcccccccchhhhhcccccc---ccccccchhhhcccCcccccchhhhhhhHhhhhccc---CHHHHHHHH
Confidence            8887776    456778888888777765   44455555444544    567888888888887776   333444444


Q ss_pred             HHHH
Q 010459          322 EVYI  325 (510)
Q Consensus       322 ~~~~  325 (510)
                      .+|.
T Consensus       222 ~~y~  225 (265)
T d1ouva_         222 AMQY  225 (265)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4443


No 42 
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=97.02  E-value=0.0097  Score=47.47  Aligned_cols=81  Identities=7%  Similarity=-0.082  Sum_probs=61.7

Q ss_pred             CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCccCHHHHHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 010459          243 DHITYNLLIQEFACAGLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEKFYKRLLNSRTPLKEDLVRKLAE  322 (510)
Q Consensus       243 ~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~~~~li~  322 (510)
                      +...|..+-.+|.+.|++++|+..+++..+... -+..+|..+..++...|++++|.+.|....+.. +.+..+...+..
T Consensus        76 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p-~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~-p~n~~~~~~l~~  153 (169)
T d1ihga1          76 ALSCVLNIGACKLKMSDWQGAVDSCLEALEIDP-SNTKALYRRAQGWQGLKEYDQALADLKKAQEIA-PEDKAIQAELLK  153 (169)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhhcccchhhhhhhhhhhhhh-hhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHHHHHHHH
Confidence            455677778889999999999999999887643 267788889999999999999999999988764 234455555544


Q ss_pred             HHH
Q 010459          323 VYI  325 (510)
Q Consensus       323 ~~~  325 (510)
                      ++.
T Consensus       154 ~~~  156 (169)
T d1ihga1         154 VKQ  156 (169)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443


No 43 
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=97.02  E-value=0.00066  Score=59.11  Aligned_cols=51  Identities=20%  Similarity=0.156  Sum_probs=28.4

Q ss_pred             hcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 010459          151 EEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKE  202 (510)
Q Consensus       151 ~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~  202 (510)
                      +.|++++|+..+++..+.. +.|...+..+...|+..|++++|.+.|+...+
T Consensus         8 ~~G~l~eAl~~l~~al~~~-P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~   58 (264)
T d1zbpa1           8 SEGQLQQALELLIEAIKAS-PKDASLRSSFIELLCIDGDFERADEQLMQSIK   58 (264)
T ss_dssp             TTTCHHHHHHHHHHHHHTC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HCCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence            3455556666555555543 22455555555556666666666555555554


No 44 
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=97.01  E-value=0.00062  Score=59.27  Aligned_cols=123  Identities=10%  Similarity=-0.047  Sum_probs=78.3

Q ss_pred             HHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHH
Q 010459          184 YSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRM  263 (510)
Q Consensus       184 ~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A  263 (510)
                      ..+.|++++|++.+++.++.... |...+..+...|+..|++++|.+.|+...+.. +-+...+..+...+...+..+++
T Consensus         6 aL~~G~l~eAl~~l~~al~~~P~-d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~-P~~~~~~~~l~~ll~a~~~~~~a   83 (264)
T d1zbpa1           6 ALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLF-PEYLPGASQLRHLVKAAQARKDF   83 (264)
T ss_dssp             HTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-GGGHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHhccccHHH
Confidence            34678899999999998887543 77888999999999999999999999887653 12344444444443333333322


Q ss_pred             HHHHHHHHHCCCccCHHHHHHHHHHHHhcCChhHHHHHHHHHHhc
Q 010459          264 EGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEKFYKRLLNS  308 (510)
Q Consensus       264 ~~~~~~m~~~g~~p~~~t~~~ll~~~~~~g~~~~a~~~~~~m~~~  308 (510)
                      ..-...-...+-+++...+......+...|+.++|.+.+.++.+.
T Consensus        84 ~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~  128 (264)
T d1zbpa1          84 AQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEEL  128 (264)
T ss_dssp             TTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             HHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhc
Confidence            211111011111223344455566677788999999988887764


No 45 
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=96.97  E-value=0.015  Score=46.33  Aligned_cols=62  Identities=6%  Similarity=0.016  Sum_probs=34.9

Q ss_pred             HHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhC
Q 010459          176 IYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLD  238 (510)
Q Consensus       176 ~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a~~~~~~m~~~  238 (510)
                      .|+.+-.+|.+.|++++|+..++..++... .+..+|..+..+|...|++++|...|++..+.
T Consensus        66 ~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p-~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l  127 (168)
T d1kt1a1          66 AFLNLAMCYLKLREYTKAVECCDKALGLDS-ANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV  127 (168)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS
T ss_pred             HHHhHHHHHHHhhhcccchhhhhhhhhccc-chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence            344455555566666666666665555432 24555555556666666666666666665554


No 46 
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=96.91  E-value=0.046  Score=43.25  Aligned_cols=62  Identities=13%  Similarity=0.102  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010459          211 TYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLTK  273 (510)
Q Consensus       211 t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~  273 (510)
                      +|+.+-.+|.+.|++++|...++...+.. +.+..+|..+..+|...|++++|.+.|+...+.
T Consensus        66 ~~~Nla~~~~~l~~~~~Ai~~~~~al~l~-p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l  127 (168)
T d1kt1a1          66 AFLNLAMCYLKLREYTKAVECCDKALGLD-SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV  127 (168)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS
T ss_pred             HHHhHHHHHHHhhhcccchhhhhhhhhcc-cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence            44556666677777777777777766554 446667777777777777777777777777654


No 47 
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=96.73  E-value=0.0046  Score=48.05  Aligned_cols=69  Identities=10%  Similarity=-0.015  Sum_probs=33.3

Q ss_pred             hcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcC----------ChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q 010459          151 EEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIG----------KFNEALLFLNEMKEMNLSPQSDTYDGLIQAYG  220 (510)
Q Consensus       151 ~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g----------~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~  220 (510)
                      +.+.+++|+..|+...+.. +.|..+|..+-.++...+          .+++|++.|++..+.... +..+|..+-..|.
T Consensus         9 r~~~fe~A~~~~e~al~~~-P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~-~~~a~~~lG~~y~   86 (145)
T d1zu2a1           9 RILLFEQIRQDAENTYKSN-PLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYT   86 (145)
T ss_dssp             HHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHH
T ss_pred             HHccHHHHHHHHHHHHhhC-CcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcch-hhHHHhhHHHHHH
Confidence            4445666666666665543 224455555555554332          234455555555443221 3444444444444


Q ss_pred             c
Q 010459          221 K  221 (510)
Q Consensus       221 ~  221 (510)
                      .
T Consensus        87 ~   87 (145)
T d1zu2a1          87 S   87 (145)
T ss_dssp             H
T ss_pred             H
Confidence            3


No 48 
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.72  E-value=0.0006  Score=65.72  Aligned_cols=112  Identities=8%  Similarity=-0.170  Sum_probs=44.2

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCccCHHHHHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 010459          244 HITYNLLIQEFACAGLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEKFYKRLLNSRTPLKEDLVRKLAEV  323 (510)
Q Consensus       244 ~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~~~~li~~  323 (510)
                      ...|..+-..+.+.|+.++|...+.......   ...++..+-..+...|++++|...|.+..+.. +-+...|+.|...
T Consensus       120 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~---~~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~-P~~~~~~~~Lg~~  195 (497)
T d1ya0a1         120 RVKSSQLGIISNKQTHTSAIVKPQSSSCSYI---CQHCLVHLGDIARYRNQTSQAESYYRHAAQLV-PSNGQPYNQLAIL  195 (497)
T ss_dssp             -----------------------CCHHHHHH---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTBSHHHHHHHHH
T ss_pred             HHHHHHhHHHHHhCCCHHHHHHHHHHHhCCC---HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CCchHHHHHHHHH
Confidence            3344444445555555555555444333211   11344445555555555555555555555443 2233455555555


Q ss_pred             HHhhcchhHHHHHHHHHHhhcCCchHHHHHHHHHhh
Q 010459          324 YIKNYMFSRLDDLGDDLASRIGRTELVWCLRLLSHA  359 (510)
Q Consensus       324 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~li~~~~  359 (510)
                      |...|+..+|...+.......++.+.++..+...+.
T Consensus       196 ~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~~~  231 (497)
T d1ya0a1         196 ASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS  231 (497)
T ss_dssp             HHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence            555555555555555555555555555555544433


No 49 
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=96.62  E-value=0.0057  Score=47.52  Aligned_cols=117  Identities=8%  Similarity=0.026  Sum_probs=76.7

Q ss_pred             HHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHcc----------CCHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 010459          184 YSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKY----------KMYDEIDMCLKMMKLDGCSPDHITYNLLIQE  253 (510)
Q Consensus       184 ~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~----------g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~  253 (510)
                      |-+.+.+++|.+.|+...+.... +..++..+-.+|...          +.+++|...|++..+.. +.+..+|..+-.+
T Consensus         7 ~~r~~~fe~A~~~~e~al~~~P~-~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~-P~~~~a~~~lG~~   84 (145)
T d1zu2a1           7 FDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLID-PKKDEAVWCIGNA   84 (145)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHH
T ss_pred             HHHHccHHHHHHHHHHHHhhCCc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhc-chhhHHHhhHHHH
Confidence            34556688999999998876532 666777777777643          44577888888887664 4567788877777


Q ss_pred             HHHcCC-----------HHHHHHHHHHHHHCCCccCHHHHHHHHHHHHhcCChhHHHHHHHHHHhcCC
Q 010459          254 FACAGL-----------LKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEKFYKRLLNSRT  310 (510)
Q Consensus       254 ~~~~g~-----------~~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~~g~~~~a~~~~~~m~~~~~  310 (510)
                      |...|+           +++|.+.|+...+.  .|+...|..-+..+      .++.+++.+..+.|+
T Consensus        85 y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l--~P~~~~~~~~L~~~------~ka~~~~~e~~k~~~  144 (145)
T d1zu2a1          85 YTSFAFLTPDETEAKHNFDLATQFFQQAVDE--QPDNTHYLKSLEMT------AKAPQLHAEAYKQGL  144 (145)
T ss_dssp             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH--CTTCHHHHHHHHHH------HTHHHHHHHHHHSSS
T ss_pred             HHHcccchhhHHHHHHhHHHhhhhhhccccc--CCCHHHHHHHHHHH------HHHHHHHHHHHHHhc
Confidence            766543           46677777766654  45555555444433      455666666666553


No 50 
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=96.49  E-value=0.022  Score=44.52  Aligned_cols=55  Identities=9%  Similarity=-0.023  Sum_probs=27.0

Q ss_pred             HHHhcCCCCcHHHHHHHHHhhcCCCCC----------HHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 010459          112 FLKNSSRSRQIPQVFDMWKNIEKSRIN----------EFNSQKIIGMLCEEGLMEEAVRAFQEME  166 (510)
Q Consensus       112 ~~~~~g~~~~a~~~~~~~~~~~~~~~~----------~~~~~~li~~~~~~g~~~~A~~~~~~m~  166 (510)
                      .+.+.|++++|.+.|+...+...-.|+          ...|+.+-.+|.+.|++++|..-+++..
T Consensus        18 ~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al   82 (156)
T d2hr2a1          18 RQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKAL   82 (156)
T ss_dssp             HHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhh
Confidence            344456666666666655543222222          2344455555555555555555554443


No 51 
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.34  E-value=0.0011  Score=63.90  Aligned_cols=134  Identities=7%  Similarity=-0.103  Sum_probs=81.8

Q ss_pred             CCHHHHHHHHHHHHHCCCcc-CHHHHHHHHHHHHhcCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhcchhHHHHH
Q 010459          258 GLLKRMEGTYKSMLTKRMHL-RSSTMVAILDAYMNFGMLDKMEKFYKRLLNSRTPLKEDLVRKLAEVYIKNYMFSRLDDL  336 (510)
Q Consensus       258 g~~~~A~~~~~~m~~~g~~p-~~~t~~~ll~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~  336 (510)
                      +.++.|+..+....  ++.| +...+..+-..+.+.|+.++|...+....+..   ....+..+.+.+...+++++|...
T Consensus       100 ~~Y~~ai~~l~~~~--~l~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~---~~~~~~~LG~l~~~~~~~~~A~~~  174 (497)
T d1ya0a1         100 GFYTQLLQELCTVF--NVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYI---CQHCLVHLGDIARYRNQTSQAESY  174 (497)
T ss_dssp             HHHHHHHHHHTC---------------------------------CCHHHHHH---HHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHHHHHHH--CCChhhHHHHHHhHHHHHhCCCHHHHHHHHHHHhCCC---HHHHHHHHHHHHHHcccHHHHHHH
Confidence            34444444443332  2233 44566667777788888888887776655422   134677788899999999999999


Q ss_pred             HHHHHhhcCCchHHHHHHHHHhhhhcccccHHHHHHHHHHCCCCcCHHHHHHHHHHHHcCC
Q 010459          337 GDDLASRIGRTELVWCLRLLSHACLLSHRGIDSVVREMESAKVRWNVTTANIILLAYLKMK  397 (510)
Q Consensus       337 ~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~~~~~li~~~~~~g  397 (510)
                      +.......+.+...|+.+...+...|+..+|...|.+...... |-..++..|...+.+..
T Consensus       175 y~~A~~l~P~~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~-~~~~a~~nL~~~~~~~~  234 (497)
T d1ya0a1         175 YRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKF-PFPAASTNLQKALSKAL  234 (497)
T ss_dssp             HHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSB-CCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999887654 57788888888776543


No 52 
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=96.33  E-value=0.031  Score=43.64  Aligned_cols=26  Identities=19%  Similarity=0.152  Sum_probs=13.1

Q ss_pred             HHHHHHHHHHHccCCHHHHHHHHHHH
Q 010459          210 DTYDGLIQAYGKYKMYDEIDMCLKMM  235 (510)
Q Consensus       210 ~t~~~li~~~~~~g~~~~a~~~~~~m  235 (510)
                      .+|+.+-.+|.+.|++++|...+++.
T Consensus        56 ~~~~nlg~~~~~lg~~~~A~~~~~~a   81 (156)
T d2hr2a1          56 FCHAGLAEALAGLRSFDEALHSADKA   81 (156)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCccchhhHhhhhh
Confidence            34445555555555555555544443


No 53 
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.02  E-value=0.13  Score=35.84  Aligned_cols=60  Identities=10%  Similarity=-0.069  Sum_probs=26.3

Q ss_pred             HHHHHHHhcCChHHHHHHHHHHHHC-----CCCCC-HHHHHHHHHHHHccCCHHHHHHHHHHHHhC
Q 010459          179 SIIHGYSKIGKFNEALLFLNEMKEM-----NLSPQ-SDTYDGLIQAYGKYKMYDEIDMCLKMMKLD  238 (510)
Q Consensus       179 ~li~~~~~~g~~~~a~~~~~~m~~~-----g~~p~-~~t~~~li~~~~~~g~~~~a~~~~~~m~~~  238 (510)
                      .+...+.+.|++++|...|++..+.     ...++ ..+++.|..+|.+.|++++|...+++..+.
T Consensus        10 ~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l   75 (95)
T d1tjca_          10 ELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL   75 (95)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHh
Confidence            3444444455555555444444321     00111 234444555555555555555555554443


No 54 
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.93  E-value=0.079  Score=37.13  Aligned_cols=62  Identities=6%  Similarity=-0.005  Sum_probs=30.1

Q ss_pred             HHHHHHHHhcCCCCcHHHHHHHHHhhcC----CCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 010459          107 WAVIRFLKNSSRSRQIPQVFDMWKNIEK----SRIN-EFNSQKIIGMLCEEGLMEEAVRAFQEMEGF  168 (510)
Q Consensus       107 ~~ll~~~~~~g~~~~a~~~~~~~~~~~~----~~~~-~~~~~~li~~~~~~g~~~~A~~~~~~m~~~  168 (510)
                      ..+-..+.+.|++++|.+.|+...+...    ..++ ..+++.|-.+|.+.|++++|+..+++..+.
T Consensus         9 ~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l   75 (95)
T d1tjca_           9 FELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL   75 (95)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHh
Confidence            3444555555666666655554443211    1111 234455555555555555555555555543


No 55 
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]}
Probab=94.04  E-value=0.78  Score=33.94  Aligned_cols=48  Identities=6%  Similarity=-0.032  Sum_probs=23.2

Q ss_pred             CHHHHHHHHHHHHHCCCccCHHHHHHHHHHHHh----cCChhHHHHHHHHHHhcC
Q 010459          259 LLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMN----FGMLDKMEKFYKRLLNSR  309 (510)
Q Consensus       259 ~~~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~----~g~~~~a~~~~~~m~~~~  309 (510)
                      +.++|+++|+.-.+.|   ++.....|-..|..    ..+.++|.++++...+.|
T Consensus        74 d~~~A~~~~~~aa~~g---~~~a~~~Lg~~y~~G~gv~~d~~~A~~~~~~Aa~~G  125 (133)
T d1klxa_          74 DLRKAAQYYSKACGLN---DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG  125 (133)
T ss_dssp             CHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred             hhHHHHHHHhhhhccC---cchHHHHHHHHHHcCCccCCCHHHHHHHHHHHHHCC
Confidence            4555555555555554   22233333333333    235555666665555544


No 56 
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]}
Probab=93.50  E-value=0.99  Score=33.33  Aligned_cols=111  Identities=11%  Similarity=-0.035  Sum_probs=69.0

Q ss_pred             CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHc----cCCHHHHH
Q 010459          154 LMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGK----YKMYDEID  229 (510)
Q Consensus       154 ~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~----~g~~~~a~  229 (510)
                      |+++|++.|++..+.|..   ..+..|..  ....+.++|++.+++.-+.|   +...+..|-..|..    ..+.++|.
T Consensus         8 d~~~A~~~~~kaa~~g~~---~a~~~l~~--~~~~~~~~a~~~~~~aa~~g---~~~a~~~Lg~~y~~g~~~~~d~~~A~   79 (133)
T d1klxa_           8 DLKKAIQYYVKACELNEM---FGCLSLVS--NSQINKQKLFQYLSKACELN---SGNGCRFLGDFYENGKYVKKDLRKAA   79 (133)
T ss_dssp             HHHHHHHHHHHHHHTTCT---THHHHHHT--CTTSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred             CHHHHHHHHHHHHHCCCh---hhhhhhcc--ccccCHHHHHHHHhhhhccc---chhhhhhHHHhhhhccccchhhHHHH
Confidence            566777777777666522   22223322  23456778888888877766   45555556555554    35678888


Q ss_pred             HHHHHHHhCCCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHCCC
Q 010459          230 MCLKMMKLDGCSPDHITYNLLIQEFAC----AGLLKRMEGTYKSMLTKRM  275 (510)
Q Consensus       230 ~~~~~m~~~g~~~~~~~~~~li~~~~~----~g~~~~A~~~~~~m~~~g~  275 (510)
                      ++|++..+.|   +......|-..|..    ..+.++|.++|+.-.+.|.
T Consensus        80 ~~~~~aa~~g---~~~a~~~Lg~~y~~G~gv~~d~~~A~~~~~~Aa~~G~  126 (133)
T d1klxa_          80 QYYSKACGLN---DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGS  126 (133)
T ss_dssp             HHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred             HHHhhhhccC---cchHHHHHHHHHHcCCccCCCHHHHHHHHHHHHHCCC
Confidence            8888887765   33344444444544    3577788888887777663


No 57 
>d1wy6a1 a.118.20.1 (A:7-167) Hypothetical protein ST1625 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=89.31  E-value=2.8  Score=30.26  Aligned_cols=139  Identities=14%  Similarity=0.170  Sum_probs=95.0

Q ss_pred             hcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHHHH
Q 010459          151 EEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDM  230 (510)
Q Consensus       151 ~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a~~  230 (510)
                      -.|.+++..++..+..+   ..+..-||.+|--....-+-+...++++..-.- +  |          ..+|+++.....
T Consensus        14 ldG~ve~Gveii~k~~~---ss~~~E~NW~ICNiidt~dC~~v~~~Ld~IG~~-F--D----------ls~C~Nlk~vv~   77 (161)
T d1wy6a1          14 LDGYIDEGVKIVLEITK---SSTKSEYNWFICNLLESIDCRYMFQVLDKIGSY-F--D----------LDKCQNLKSVVE   77 (161)
T ss_dssp             HTTCHHHHHHHHHHHHH---HSCHHHHTHHHHHHHHHCCHHHHHHHHHHHGGG-S--C----------GGGCSCTHHHHH
T ss_pred             HhhhHHhHHHHHHHHcc---cCCccccceeeeecccccchHHHHHHHHHHhhh-c--C----------chhhhcHHHHHH
Confidence            45777777887777765   335666777776666666666666666555221 1  1          124555555555


Q ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCccCHHHHHHHHHHHHhcCChhHHHHHHHHHHhcCC
Q 010459          231 CLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEKFYKRLLNSRT  310 (510)
Q Consensus       231 ~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~~g~~~~a~~~~~~m~~~~~  310 (510)
                      .+-.+-     .+....+..++...+.|+-+.-.++++.+.+. -+|++.....+..||.+.|+..++-+++.+..+.|+
T Consensus        78 C~~~~n-----~~se~vdlALd~lv~~~kkd~Ld~i~~~l~kn-~~i~~~~llkia~A~kkig~~re~nell~~ACe~G~  151 (161)
T d1wy6a1          78 CGVINN-----TLNEHVNKALDILVIQGKRDKLEEIGREILKN-NEVSASILVAIANALRRVGDERDATTLLIEACKKGE  151 (161)
T ss_dssp             HHHHTT-----CCCHHHHHHHHHHHHTTCHHHHHHHHHHHC---CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred             HHHHhc-----chHHHHHHHHHHHHHhccHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhH
Confidence            544443     34455677788888999988888898887763 466777888888999999999999999998888885


Q ss_pred             C
Q 010459          311 P  311 (510)
Q Consensus       311 ~  311 (510)
                      .
T Consensus       152 K  152 (161)
T d1wy6a1         152 K  152 (161)
T ss_dssp             H
T ss_pred             H
Confidence            3


No 58 
>d1wy6a1 a.118.20.1 (A:7-167) Hypothetical protein ST1625 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=87.30  E-value=3.9  Score=29.51  Aligned_cols=141  Identities=6%  Similarity=-0.070  Sum_probs=79.7

Q ss_pred             HHhcCCCCcHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCChHH
Q 010459          113 LKNSSRSRQIPQVFDMWKNIEKSRINEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNE  192 (510)
Q Consensus       113 ~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~  192 (510)
                      +...|..+++.++......    ..+..-||-+|.-....-+-+...++++.+-+.   -|.          ...+++..
T Consensus        12 ~ildG~ve~Gveii~k~~~----ss~~~E~NW~ICNiidt~dC~~v~~~Ld~IG~~---FDl----------s~C~Nlk~   74 (161)
T d1wy6a1          12 FLLDGYIDEGVKIVLEITK----SSTKSEYNWFICNLLESIDCRYMFQVLDKIGSY---FDL----------DKCQNLKS   74 (161)
T ss_dssp             HHHTTCHHHHHHHHHHHHH----HSCHHHHTHHHHHHHHHCCHHHHHHHHHHHGGG---SCG----------GGCSCTHH
T ss_pred             HHHhhhHHhHHHHHHHHcc----cCCccccceeeeecccccchHHHHHHHHHHhhh---cCc----------hhhhcHHH
Confidence            3456778888888887765    345566777777777777777777777766432   121          11222333


Q ss_pred             HHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010459          193 ALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLT  272 (510)
Q Consensus       193 a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~  272 (510)
                      ....+-.+-     .+..-++.-++...+.|+-+.-.++++.+.+.+ ++++...-.+..+|.+.|...++-+++.+.-+
T Consensus        75 vv~C~~~~n-----~~se~vdlALd~lv~~~kkd~Ld~i~~~l~kn~-~i~~~~llkia~A~kkig~~re~nell~~ACe  148 (161)
T d1wy6a1          75 VVECGVINN-----TLNEHVNKALDILVIQGKRDKLEEIGREILKNN-EVSASILVAIANALRRVGDERDATTLLIEACK  148 (161)
T ss_dssp             HHHHHHHTT-----CCCHHHHHHHHHHHHTTCHHHHHHHHHHHC--C-CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhc-----chHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence            322222221     123344555556666666666666666654443 55566666666666666666666666666666


Q ss_pred             CCCc
Q 010459          273 KRMH  276 (510)
Q Consensus       273 ~g~~  276 (510)
                      .|++
T Consensus       149 ~G~K  152 (161)
T d1wy6a1         149 KGEK  152 (161)
T ss_dssp             TTCH
T ss_pred             HhHH
Confidence            6654


No 59 
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=81.41  E-value=5.8  Score=28.55  Aligned_cols=23  Identities=13%  Similarity=-0.000  Sum_probs=10.2

Q ss_pred             HHHHHHccCCHHHHHHHHHHHHh
Q 010459          215 LIQAYGKYKMYDEIDMCLKMMKL  237 (510)
Q Consensus       215 li~~~~~~g~~~~a~~~~~~m~~  237 (510)
                      |--+|.+.|++++|.+.++.+.+
T Consensus        79 Lav~yyklgdy~~A~~~~~~~L~  101 (124)
T d2pqrb1          79 LTIGCYKLGEYSMAKRYVDTLFE  101 (124)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHc
Confidence            33344444444444444444443


No 60 
>d1v54e_ a.118.11.1 (E:) Cytochrome c oxidase subunit E {Cow (Bos taurus) [TaxId: 9913]}
Probab=81.20  E-value=6.2  Score=26.87  Aligned_cols=48  Identities=6%  Similarity=0.012  Sum_probs=32.2

Q ss_pred             CHHHHHHHHHHHHHCCCccCHHHHHHHHHHHHhcCChhHHHHHHHHHH
Q 010459          259 LLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLDKMEKFYKRLL  306 (510)
Q Consensus       259 ~~~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~~g~~~~a~~~~~~m~  306 (510)
                      +.-++.+-++.+....+-|++....+.++||.+.+++..|.++++-++
T Consensus        21 D~we~rrgmN~l~~~DlVPeP~Ii~aALrAcRRvND~alAVR~lE~vK   68 (105)
T d1v54e_          21 DAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVK   68 (105)
T ss_dssp             CHHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            344555555555566667777777777777777777777777776665


No 61 
>d1v54e_ a.118.11.1 (E:) Cytochrome c oxidase subunit E {Cow (Bos taurus) [TaxId: 9913]}
Probab=78.55  E-value=7.7  Score=26.39  Aligned_cols=45  Identities=18%  Similarity=0.249  Sum_probs=23.0

Q ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHH
Q 010459          192 EALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMK  236 (510)
Q Consensus       192 ~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~g~~~~a~~~~~~m~  236 (510)
                      +..+-++.+...++.|++....+-+++|-|.+++..|.++|+..+
T Consensus        24 e~rrgmN~l~~~DlVPeP~Ii~aALrAcRRvND~alAVR~lE~vK   68 (105)
T d1v54e_          24 ELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVK   68 (105)
T ss_dssp             HHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            333444444444455555555555555555555555555555544


No 62 
>d2nsza1 a.118.1.14 (A:322-450) Programmed cell death 4, PDCD4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=60.80  E-value=23  Score=25.33  Aligned_cols=68  Identities=19%  Similarity=0.239  Sum_probs=36.4

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHCCCccCHHHHHHHHHHHHhcCChh--HHHHHHHHHHhcCCCCCHH
Q 010459          247 YNLLIQEFACAGLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLD--KMEKFYKRLLNSRTPLKED  315 (510)
Q Consensus       247 ~~~li~~~~~~g~~~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~~g~~~--~a~~~~~~m~~~~~~~~~~  315 (510)
                      ...++.-|...|+.++|...++++...... ....+..+..+.-+.+.-.  ....++..+...|+.+...
T Consensus        10 ~~~ll~EY~~~~D~~Ea~~~l~eL~~p~~~-~e~V~~~i~~ale~~~~~r~~~~~~Ll~~L~~~~~is~~~   79 (129)
T d2nsza1          10 IDMLLKEYLLSGDISEAEHCLKELEVPHFH-HELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQ   79 (129)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHHHHHTCGGGH-HHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHH
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHcCCchhh-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHCCCCCHHH
Confidence            456667777777777777777776432222 2334444444444443332  2455666666666544433


No 63 
>d1qsaa1 a.118.5.1 (A:1-450) 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain {Escherichia coli [TaxId: 562]}
Probab=59.99  E-value=57  Score=28.89  Aligned_cols=204  Identities=7%  Similarity=-0.057  Sum_probs=95.6

Q ss_pred             CCHHHHHHHHHHHHHCCCccCHHHHHHHHH----HHHhcCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhcchhHH
Q 010459          258 GLLKRMEGTYKSMLTKRMHLRSSTMVAILD----AYMNFGMLDKMEKFYKRLLNSRTPLKEDLVRKLAEVYIKNYMFSRL  333 (510)
Q Consensus       258 g~~~~A~~~~~~m~~~g~~p~~~t~~~ll~----~~~~~g~~~~a~~~~~~m~~~~~~~~~~~~~~li~~~~~~~~~~~a  333 (510)
                      .+.+.|..++......... +...+..+-.    .....+..+.+..++......+  .+.......+......+++..+
T Consensus       228 ~d~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~w~~~~al~~~~~~~~  304 (450)
T d1qsaa1         228 QDAENARLMIPSLAQAQQL-NEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRS--QSTSLIERRVRMALGTGDRRGL  304 (450)
T ss_dssp             HCHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTC--CCHHHHHHHHHHHHHHTCHHHH
T ss_pred             cChhHHHHHHHhhhhcccc-cHHHHHHHHHHHHHHHHHcCchHHHHHHHHhhcccc--cchHHHHHHHHHHHHcCChHHH
Confidence            4666777777666543211 2222222222    2223355566666666555443  3344444455555566666666


Q ss_pred             HHHHHHHHhhcCCchHHHHHHHHHhhhhcccccHHHHHHHHHHCCCCcCHHHHHHHHHHHHcCCChhHHHHHHHhhhhCC
Q 010459          334 DDLGDDLASRIGRTELVWCLRLLSHACLLSHRGIDSVVREMESAKVRWNVTTANIILLAYLKMKDFKHLRVLLSELPTRH  413 (510)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g  413 (510)
                      ...+..+............=+..++...|+.+.|...|......   ++   |-..+.+- +.|..-.       +....
T Consensus       305 ~~~~~~l~~~~~~~~r~~YW~gRa~~~~G~~~~A~~~~~~~a~~---~~---fYG~LAa~-~Lg~~~~-------~~~~~  370 (450)
T d1qsaa1         305 NTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQ---RG---FYPMVAAQ-RIGEEYE-------LKIDK  370 (450)
T ss_dssp             HHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS---CS---HHHHHHHH-HTTCCCC-------CCCCC
T ss_pred             HHHHHhcCcccccHHHHHHHHHHHHHHcCChhhHHHHHHHHhcC---CC---hHHHHHHH-HcCCCCC-------CCcCC
Confidence            66655443322222222233445566667777777777766542   22   22222211 1111000       00000


Q ss_pred             C--CCCH-HHH---HHHHHhhhhcCccchHHHHHHHcCCccccccccChhHHHHHhhccCchhHHHHHHhhcCC
Q 010459          414 V--KPDI-VTI---GILYDARRIGFDGTGALEMWKRIGFLFKTVEINTDPLVLAVYGKGHFLRYCEEVYSSLEP  481 (510)
Q Consensus       414 ~--~p~~-~t~---~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~  481 (510)
                      +  .+.. ..-   ..-+..+...|....|...|..+...   .+......+.....+.|.++.|.....+...
T Consensus       371 ~~~~~~~~~~~~~~~~ra~~L~~~g~~~~A~~e~~~l~~~---~~~~~~~~la~lA~~~g~~~~aI~a~~~~~~  441 (450)
T d1qsaa1         371 APQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKS---KSKTEQAQLARYAFNNQWWDLSVQATIAGKL  441 (450)
T ss_dssp             CCSCCCCHHHHSHHHHHHHHHHHTTCHHHHHHHHHHHHTT---CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred             CCccHHHhhhcChHHHHHHHHHHcCCchHHHHHHHHHHhC---CCHHHHHHHHHHHHHCCChhHHHHHHHHHHc
Confidence            0  0000 010   11123455667777887777765332   2233344555666677888877777666543


No 64 
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]}
Probab=58.83  E-value=17  Score=22.59  Aligned_cols=47  Identities=17%  Similarity=0.035  Sum_probs=22.2

Q ss_pred             cHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 010459          121 QIPQVFDMWKNIEKSRINEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFA  169 (510)
Q Consensus       121 ~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g  169 (510)
                      ++..+++.+.  .|.-+|...-..|+....+.-..++.....+.|.+.+
T Consensus        19 e~~~~~~~i~--~g~~~d~qiaafL~al~~kg~t~dEi~g~~~am~~~~   65 (69)
T d1khda1          19 ESHQLFAAIV--RGELEDSQLAAALISMKMRGERPEEIAGAASALLADA   65 (69)
T ss_dssp             HHHHHHHHHT--TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHH--cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhC
Confidence            4444444443  3444444444444444444445555555555554443


No 65 
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=58.54  E-value=27  Score=24.77  Aligned_cols=66  Identities=5%  Similarity=-0.025  Sum_probs=31.7

Q ss_pred             CCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHCCCccCH-HHHHHHHHHHHhcCChhHHHHHHHHHHhc
Q 010459          242 PDHITYNLLIQEFACAG---LLKRMEGTYKSMLTKRMHLRS-STMVAILDAYMNFGMLDKMEKFYKRLLNS  308 (510)
Q Consensus       242 ~~~~~~~~li~~~~~~g---~~~~A~~~~~~m~~~g~~p~~-~t~~~ll~~~~~~g~~~~a~~~~~~m~~~  308 (510)
                      +++.|--...-+++++.   +.++++.++++....+ +.+. ..+--|--+|.+.|++++|++.++.+++.
T Consensus        33 ~s~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~-p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~i  102 (124)
T d2pqrb1          33 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEA-ESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH  102 (124)
T ss_dssp             SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHC-GGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcC-chhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcc
Confidence            34444334444444443   3345566666555432 1121 23334444555666666666666665554


No 66 
>d1ug3a1 a.118.1.14 (A:1235-1427) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.11  E-value=26  Score=27.12  Aligned_cols=25  Identities=12%  Similarity=0.163  Sum_probs=16.2

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHH
Q 010459          247 YNLLIQEFACAGLLKRMEGTYKSML  271 (510)
Q Consensus       247 ~~~li~~~~~~g~~~~A~~~~~~m~  271 (510)
                      ...+|.-|...|+.++|...++++.
T Consensus        13 ~~~il~Ey~~~~D~~Ea~~~l~el~   37 (193)
T d1ug3a1          13 SKAIIEEYLHLNDMKEAVQCVQELA   37 (193)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHcC
Confidence            4556666666777777776666653


No 67 
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.72  E-value=4.6  Score=32.43  Aligned_cols=14  Identities=29%  Similarity=0.385  Sum_probs=6.1

Q ss_pred             HHhcCCHHHHHHHH
Q 010459          149 LCEEGLMEEAVRAF  162 (510)
Q Consensus       149 ~~~~g~~~~A~~~~  162 (510)
                      .+..|+++...+++
T Consensus        10 ~a~~G~~~~v~~~l   23 (223)
T d1uoha_          10 LAYSGKLEELKESI   23 (223)
T ss_dssp             HHHTTCHHHHHHHH
T ss_pred             HHHhCCHHHHHHHH
Confidence            34444444444443


No 68 
>d1mzba_ a.4.5.42 (A:) Ferric uptake regulation protein, FUR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=43.33  E-value=26  Score=25.12  Aligned_cols=60  Identities=13%  Similarity=0.119  Sum_probs=31.5

Q ss_pred             HHHCCCccCHHHHHHHHHHHHhc-CChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhcch
Q 010459          270 MLTKRMHLRSSTMVAILDAYMNF-GMLDKMEKFYKRLLNSRTPLKEDLVRKLAEVYIKNYMF  330 (510)
Q Consensus       270 m~~~g~~p~~~t~~~ll~~~~~~-g~~~~a~~~~~~m~~~~~~~~~~~~~~li~~~~~~~~~  330 (510)
                      +.+.|++++. .-..++.++... +..-.|.++++.+.+.+..++..|.---++.+.+.|.+
T Consensus         7 Lr~~GlR~T~-qR~~Il~~L~~~~~~h~sa~ei~~~l~~~~~~i~~aTVYR~L~~l~e~gli   67 (134)
T d1mzba_           7 LRKAGLKVTL-PRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLV   67 (134)
T ss_dssp             HHHTTCCCCH-HHHHHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSE
T ss_pred             HHHcCCCCCH-HHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCccHHHHHHHHHHHHhccEE
Confidence            4555655543 334455555544 33555666666666665555555444444555555543


No 69 
>d1qsaa1 a.118.5.1 (A:1-450) 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain {Escherichia coli [TaxId: 562]}
Probab=42.99  E-value=1.1e+02  Score=26.95  Aligned_cols=325  Identities=11%  Similarity=0.012  Sum_probs=152.0

Q ss_pred             HHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHcc
Q 010459          143 QKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKY  222 (510)
Q Consensus       143 ~~li~~~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~~~~~~  222 (510)
                      ...+..+.+.++++..+..+..     .+++...-.....+..+.|+.++|.+.+...-..|.. ....++.+...+.+.
T Consensus        76 ~~~l~~L~~~~~w~~~~~~~~~-----~p~~~~~~c~~~~A~~~~g~~~~a~~~~~~lW~~~~~-~p~~c~~l~~~~~~~  149 (450)
T d1qsaa1          76 SRFVNELARREDWRGLLAFSPE-----KPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGKS-QPNACDKLFSVWRAS  149 (450)
T ss_dssp             HHHHHHHHHTTCHHHHHHHCCS-----CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHHSCSSC-CCTHHHHHHHHHHHT
T ss_pred             HHHHHHHHhccCHHHHHHhccC-----CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCC-CchHHHHHHHHHHhc
Confidence            3445666777777665544421     1334444455666677777777777776666544422 122333344433333


Q ss_pred             ------------------CCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCccCHHHHHH
Q 010459          223 ------------------KMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLTKRMHLRSSTMVA  284 (510)
Q Consensus       223 ------------------g~~~~a~~~~~~m~~~g~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~p~~~t~~~  284 (510)
                                        |+...|..+...+.    ..........+.....   ...+....   ...  .++......
T Consensus       150 ~~lt~~~~~~R~~~~l~~~~~~~a~~l~~~l~----~~~~~~~~a~~~l~~~---p~~~~~~~---~~~--~~~~~~~~~  217 (450)
T d1qsaa1         150 GKQDPLAYLERIRLAMKAGNTGLVTVLAGQMP----ADYQTIASAIISLANN---PNTVLTFA---RTT--GATDFTRQM  217 (450)
T ss_dssp             TCSCHHHHHHHHHHHHHTTCHHHHHHHHHTCC----GGGHHHHHHHHHHHHC---GGGHHHHH---HHS--CCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHcCChhhHHHHHhhCC----hhHHHHHHHHHHHHhC---hHhHHHHH---hcC--CCChhhhHH
Confidence                              33433443333222    1112222333332221   11111111   111  123333333


Q ss_pred             HHHHHHh--cCChhHHHHHHHHHHhcCCCCCHHHHHHHHH----HHHhhcchhHHHHHHHHHHhhcCCchHHHHHHHHHh
Q 010459          285 ILDAYMN--FGMLDKMEKFYKRLLNSRTPLKEDLVRKLAE----VYIKNYMFSRLDDLGDDLASRIGRTELVWCLRLLSH  358 (510)
Q Consensus       285 ll~~~~~--~g~~~~a~~~~~~m~~~~~~~~~~~~~~li~----~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~li~~~  358 (510)
                      +..+..+  ..+.+.+..++......... +..-...+-.    .....+..+.+............ +.....-.+...
T Consensus       218 ~~~~l~rla~~d~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~w~~~~a  295 (450)
T d1qsaa1         218 AAVAFASVARQDAENARLMIPSLAQAQQL-NEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQ-STSLIERRVRMA  295 (450)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCC-CHHHHHHHHHHH
T ss_pred             HHHHHHHHhccChhHHHHHHHhhhhcccc-cHHHHHHHHHHHHHHHHHcCchHHHHHHHHhhccccc-chHHHHHHHHHH
Confidence            3333333  25677788877777654322 2222222222    22233445555555444433322 222222233344


Q ss_pred             hhhcccccHHHHHHHHHHCCCCcCHHHHHHHHHHHHcCCChhHHHHHHHhhhhCCCCCCHHHHHHHHHhhhhcCccchHH
Q 010459          359 ACLLSHRGIDSVVREMESAKVRWNVTTANIILLAYLKMKDFKHLRVLLSELPTRHVKPDIVTIGILYDARRIGFDGTGAL  438 (510)
Q Consensus       359 ~~~~~~~~a~~~~~~m~~~g~~p~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~p~~~t~~~li~~~~~~~~~~~a~  438 (510)
                      ...++...+...|..|...... ...-.--+..++...|+.++|..+|......   ++  -|.-|-.. .-+..+.   
T Consensus       296 l~~~~~~~~~~~~~~l~~~~~~-~~r~~YW~gRa~~~~G~~~~A~~~~~~~a~~---~~--fYG~LAa~-~Lg~~~~---  365 (450)
T d1qsaa1         296 LGTGDRRGLNTWLARLPMEAKE-KDEWRYWQADLLLERGREAEAKEILHQLMQQ---RG--FYPMVAAQ-RIGEEYE---  365 (450)
T ss_dssp             HHHTCHHHHHHHHHHSCTTGGG-SHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS---CS--HHHHHHHH-HTTCCCC---
T ss_pred             HHcCChHHHHHHHHhcCccccc-HHHHHHHHHHHHHHcCChhhHHHHHHHHhcC---CC--hHHHHHHH-HcCCCCC---
Confidence            5567777777887777543222 2333334556788888888888888887642   33  23332221 1111110   


Q ss_pred             HHHHHcCCccccccccC------hhHHHHHhhccCchhHHHHHHhhcCCCCCCCCcccHHHHHHHHHhcCCCC
Q 010459          439 EMWKRIGFLFKTVEINT------DPLVLAVYGKGHFLRYCEEVYSSLEPYSREKKRWTYQNLIDLVIKHNGKN  505 (510)
Q Consensus       439 ~~~~~~~~~~~~~~~~~------~~~li~~~~~~g~~~~A~~~~~~m~~~g~~p~~~~~~~li~~~~~~g~~~  505 (510)
                           +.....+.....      ...-+..+...|...+|...+..+... .+|+  ....+.....+.|..+
T Consensus       366 -----~~~~~~~~~~~~~~~~~~~~~ra~~L~~~g~~~~A~~e~~~l~~~-~~~~--~~~~la~lA~~~g~~~  430 (450)
T d1qsaa1         366 -----LKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKS-KSKT--EQAQLARYAFNNQWWD  430 (450)
T ss_dssp             -----CCCCCCCSCCCCHHHHSHHHHHHHHHHHTTCHHHHHHHHHHHHTT-CCHH--HHHHHHHHHHHTTCHH
T ss_pred             -----CCcCCCCccHHHhhhcChHHHHHHHHHHcCCchHHHHHHHHHHhC-CCHH--HHHHHHHHHHHCCChh
Confidence                 000000000000      111244667889999999988877653 3433  3345555555555544


No 70 
>d2nsza1 a.118.1.14 (A:322-450) Programmed cell death 4, PDCD4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.01  E-value=53  Score=23.27  Aligned_cols=22  Identities=27%  Similarity=0.403  Sum_probs=9.6

Q ss_pred             HHHHHHHhcCChHHHHHHHHHH
Q 010459          179 SIIHGYSKIGKFNEALLFLNEM  200 (510)
Q Consensus       179 ~li~~~~~~g~~~~a~~~~~~m  200 (510)
                      .++.-|...|+.++|...++++
T Consensus        12 ~ll~EY~~~~D~~Ea~~~l~eL   33 (129)
T d2nsza1          12 MLLKEYLLSGDISEAEHCLKEL   33 (129)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCHHHHHHHHHHc
Confidence            3444444444444444444443


No 71 
>d1mzba_ a.4.5.42 (A:) Ferric uptake regulation protein, FUR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=41.41  E-value=48  Score=23.59  Aligned_cols=62  Identities=15%  Similarity=0.180  Sum_probs=48.0

Q ss_pred             HHHhCCCCCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHCCCccCHHHHHHHHHHHHhcCChh
Q 010459          234 MMKLDGCSPDHITYNLLIQEFACA-GLLKRMEGTYKSMLTKRMHLRSSTMVAILDAYMNFGMLD  296 (510)
Q Consensus       234 ~m~~~g~~~~~~~~~~li~~~~~~-g~~~~A~~~~~~m~~~g~~p~~~t~~~ll~~~~~~g~~~  296 (510)
                      ++.+.|+.++.. -..++..+... +.+-.|.++++.+.+.+..++..|.-..|+.+...|-+.
T Consensus         6 ~Lr~~GlR~T~q-R~~Il~~L~~~~~~h~sa~ei~~~l~~~~~~i~~aTVYR~L~~l~e~gli~   68 (134)
T d1mzba_           6 ELRKAGLKVTLP-RVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVV   68 (134)
T ss_dssp             HHHHTTCCCCHH-HHHHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEE
T ss_pred             HHHHcCCCCCHH-HHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCccHHHHHHHHHHHHhccEEE
Confidence            477889887764 45677777766 457889999999999998888888777777777776554


No 72 
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]}
Probab=37.93  E-value=41  Score=20.71  Aligned_cols=7  Identities=0%  Similarity=0.064  Sum_probs=2.5

Q ss_pred             HHHHHHH
Q 010459          193 ALLFLNE  199 (510)
Q Consensus       193 a~~~~~~  199 (510)
                      +..+++.
T Consensus        20 ~~~~~~~   26 (69)
T d1khda1          20 SHQLFAA   26 (69)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            3333333


No 73 
>d2f6ma1 a.2.17.1 (A:322-385) Vacuolar protein sorting-associated protein 23, VPS23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.99  E-value=32  Score=21.02  Aligned_cols=46  Identities=7%  Similarity=0.151  Sum_probs=27.8

Q ss_pred             HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhc
Q 010459          141 NSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKI  187 (510)
Q Consensus       141 ~~~~li~~~~~~g~~~~A~~~~~~m~~~g~~~~~~~~~~li~~~~~~  187 (510)
                      .+|-|++.+++..-+++++..+++..+.|.. +..+|---++.+++.
T Consensus         3 a~nQl~~l~Aed~AieDaiy~L~~aL~~G~I-~~d~ylK~vR~LaRe   48 (64)
T d2f6ma1           3 GLNQLYNLVAQDYALTDTIEALSRMLHRGTI-PLDTFVKQGRELARQ   48 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-CHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-CHHHHHHHHHHHHHH
Confidence            3455666666666666666666666666633 466666555555544


No 74 
>d1u9pa1 a.43.1.1 (A:72-107) Arc repressor {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=31.05  E-value=28  Score=17.57  Aligned_cols=22  Identities=18%  Similarity=0.231  Sum_probs=12.8

Q ss_pred             cCCCCCHHHHHHHHHHHHhcCC
Q 010459          133 EKSRINEFNSQKIIGMLCEEGL  154 (510)
Q Consensus       133 ~~~~~~~~~~~~li~~~~~~g~  154 (510)
                      .|...|...|..++..+-+.|+
T Consensus        14 ng~s~ns~iy~~vmes~kkegr   35 (36)
T d1u9pa1          14 NGRSVNSEIYQRVMESFKKEGR   35 (36)
T ss_dssp             HTCCHHHHHHHHHHHHHHHTTC
T ss_pred             cCcchhHHHHHHHHHHHHHccC
Confidence            4555666666666665555543


No 75 
>d2f6ma1 a.2.17.1 (A:322-385) Vacuolar protein sorting-associated protein 23, VPS23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.21  E-value=46  Score=20.31  Aligned_cols=26  Identities=15%  Similarity=0.040  Sum_probs=10.1

Q ss_pred             HHHHHHHccCCHHHHHHHHHHHHhCC
Q 010459          214 GLIQAYGKYKMYDEIDMCLKMMKLDG  239 (510)
Q Consensus       214 ~li~~~~~~g~~~~a~~~~~~m~~~g  239 (510)
                      .|++.+++..-++++...+++..+.|
T Consensus         6 Ql~~l~Aed~AieDaiy~L~~aL~~G   31 (64)
T d2f6ma1           6 QLYNLVAQDYALTDTIEALSRMLHRG   31 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            33333333333334444444433333


No 76 
>d1ug3a1 a.118.1.14 (A:1235-1427) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.72  E-value=40  Score=25.97  Aligned_cols=25  Identities=36%  Similarity=0.363  Sum_probs=13.2

Q ss_pred             HHHHHHHHHhcCCHHHHHHHHHHHH
Q 010459          142 SQKIIGMLCEEGLMEEAVRAFQEME  166 (510)
Q Consensus       142 ~~~li~~~~~~g~~~~A~~~~~~m~  166 (510)
                      ...+|.-|...|+.++|...++++.
T Consensus        13 ~~~il~Ey~~~~D~~Ea~~~l~el~   37 (193)
T d1ug3a1          13 SKAIIEEYLHLNDMKEAVQCVQELA   37 (193)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHcC
Confidence            3445555555555555555555543


No 77 
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.65  E-value=31  Score=27.02  Aligned_cols=20  Identities=20%  Similarity=0.187  Sum_probs=8.6

Q ss_pred             HHHHHhhhhhHHHHHHHHHc
Q 010459           66 LLVESYHEHQALNALIQRLN   85 (510)
Q Consensus        66 ~~~~~~~~~~~~~~~l~~~~   85 (510)
                      +++...+..|.++.+.+.+.
T Consensus         5 ~~~~~~a~~G~~~~v~~~l~   24 (223)
T d1uoha_           5 LMVCNLAYSGKLEELKESIL   24 (223)
T ss_dssp             SHHHHHHHTTCHHHHHHHHH
T ss_pred             HHHHHHHHhCCHHHHHHHHH
Confidence            33333344455444444443


No 78 
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=22.96  E-value=80  Score=19.76  Aligned_cols=48  Identities=10%  Similarity=0.259  Sum_probs=31.2

Q ss_pred             hHHHHHHHHHhcCCCCcHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhcCCH
Q 010459          105 HFWAVIRFLKNSSRSRQIPQVFDMWKNIEKSRINEFNSQKIIGMLCEEGLM  155 (510)
Q Consensus       105 ~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~  155 (510)
                      -|-.++++++...+|.+-.+.++.-   .|...+...++.++.-+.+.|-+
T Consensus         7 RY~~ILkaia~G~rWs~IK~yle~~---~G~~I~d~~ls~lL~nL~k~~~i   54 (73)
T d2fnaa1           7 RYLNIMRTLSKCGKWSDVKRALELE---EGIEISDSEIYNYLTQLTKHSWI   54 (73)
T ss_dssp             HHHHHHHHHTTCBCHHHHHHHHHHH---HCSCCCHHHHHHHHHHHHHTTSE
T ss_pred             HHHHHHHHHHccCcHHHHHHHHHHH---cCCCCChHHHHHHHHHHHHcCce
Confidence            4667788877665666655555432   56666667777777777776644


No 79 
>d2tpta1 a.46.2.1 (A:1-70) Thymidine phosphorylase {Escherichia coli [TaxId: 562]}
Probab=21.39  E-value=86  Score=19.14  Aligned_cols=47  Identities=11%  Similarity=0.058  Sum_probs=20.0

Q ss_pred             cHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhCC
Q 010459          121 QIPQVFDMWKNIEKSRINEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFA  169 (510)
Q Consensus       121 ~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~A~~~~~~m~~~g  169 (510)
                      ++..+++.+.  .|--+|...-..|+..+.+.-..++...+-+.|.+.|
T Consensus        21 E~~~~~~~i~--~g~~~d~qi~afL~al~~kGet~~Ei~~~~~aMr~sG   67 (70)
T d2tpta1          21 EIRFFINGIR--DNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRDSG   67 (70)
T ss_dssp             HHHHHHHHHH--HTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHH--cCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhC
Confidence            3444444443  2333343344444444444444444444444444433


Done!