Query 010460
Match_columns 510
No_of_seqs 210 out of 473
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 07:17:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010460.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010460hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1p1j_A Inositol-3-phosphate sy 100.0 2E-189 8E-194 1483.4 47.9 505 3-510 9-531 (533)
2 1vko_A Inositol-3-phosphate sy 100.0 4E-189 1E-193 1482.4 45.4 502 3-510 22-526 (537)
3 3qvs_A MIPS, MYO-inositol-1-ph 100.0 3E-138 1E-142 1070.8 34.7 381 62-496 1-391 (392)
4 3cin_A MYO-inositol-1-phosphat 100.0 3E-103 9E-108 814.8 25.2 372 60-502 12-392 (394)
5 1gr0_A Inositol-3-phosphate sy 100.0 9E-103 3E-107 801.4 14.7 346 56-494 12-366 (367)
6 1vjp_A MYO-inositol-1-phosphat 100.0 2.8E-91 9.7E-96 719.1 28.0 362 61-495 13-389 (394)
7 1eye_A DHPS 1, dihydropteroate 86.5 2.9 9.8E-05 41.6 9.6 136 195-333 17-175 (280)
8 1aj0_A DHPS, dihydropteroate s 83.6 5.4 0.00018 39.7 10.0 135 195-333 26-183 (282)
9 2dqw_A Dihydropteroate synthas 80.2 8.6 0.00029 38.6 10.1 136 194-334 39-197 (294)
10 1tx2_A DHPS, dihydropteroate s 80.0 13 0.00045 37.2 11.4 139 191-333 47-202 (297)
11 4djd_D C/Fe-SP, corrinoid/iron 70.0 50 0.0017 33.5 12.7 41 110-154 32-72 (323)
12 2y5s_A DHPS, dihydropteroate s 69.8 6.6 0.00023 39.3 6.1 111 193-307 32-148 (294)
13 2h9a_B CO dehydrogenase/acetyl 63.9 30 0.001 34.9 9.6 171 110-333 25-205 (310)
14 2vef_A Dihydropteroate synthas 63.6 15 0.00051 37.1 7.3 107 195-304 21-134 (314)
15 2vp8_A Dihydropteroate synthas 57.1 24 0.00081 35.8 7.5 109 193-306 51-167 (318)
16 3tr9_A Dihydropteroate synthas 56.1 21 0.0007 36.3 6.8 111 220-333 61-197 (314)
17 3mtj_A Homoserine dehydrogenas 49.1 28 0.00097 36.6 6.8 130 203-334 23-162 (444)
18 3do5_A HOM, homoserine dehydro 41.3 35 0.0012 34.2 5.8 129 203-334 15-167 (327)
19 4e38_A Keto-hydroxyglutarate-a 39.5 18 0.0006 35.1 3.2 37 264-303 95-131 (232)
20 2kxe_A DNA polymerase II small 39.1 15 0.0005 29.9 2.1 63 248-330 5-69 (75)
21 4hb7_A Dihydropteroate synthas 38.2 1E+02 0.0035 30.6 8.5 102 199-303 22-129 (270)
22 3ing_A Homoserine dehydrogenas 36.9 31 0.001 34.7 4.6 68 265-334 100-169 (325)
23 2bmb_A Folic acid synthesis pr 36.5 77 0.0026 34.4 7.9 100 205-305 247-362 (545)
24 3lmz_A Putative sugar isomeras 36.0 37 0.0013 31.3 4.8 66 211-302 64-129 (257)
25 2g0t_A Conserved hypothetical 29.0 53 0.0018 33.6 4.9 65 267-331 136-203 (350)
26 3lab_A Putative KDPG (2-keto-3 27.8 18 0.00062 34.8 1.1 30 268-300 78-107 (217)
27 3abi_A Putative uncharacterize 26.5 50 0.0017 32.8 4.1 65 268-336 94-159 (365)
28 3p6l_A Sugar phosphate isomera 25.5 1.1E+02 0.0038 28.0 6.1 33 270-302 99-131 (262)
29 2z2v_A Hypothetical protein PH 25.0 2.1E+02 0.0071 28.8 8.4 69 268-341 94-163 (365)
30 2yci_X 5-methyltetrahydrofolat 24.7 54 0.0018 32.2 3.9 66 268-333 91-167 (271)
31 1wa3_A 2-keto-3-deoxy-6-phosph 23.0 50 0.0017 29.8 3.1 54 268-331 76-129 (205)
32 3c8m_A Homoserine dehydrogenas 22.8 1.4E+02 0.0049 29.6 6.6 127 203-334 19-173 (331)
33 2k0d_X IMME7, colicin-E7 immun 21.9 33 0.0011 29.6 1.5 56 159-223 36-96 (101)
34 3khj_A Inosine-5-monophosphate 21.8 80 0.0027 32.1 4.6 49 264-312 155-221 (361)
35 3of5_A Dethiobiotin synthetase 20.8 42 0.0014 31.5 2.1 41 298-338 5-45 (228)
36 3fgn_A Dethiobiotin synthetase 20.3 59 0.002 31.3 3.1 42 298-339 27-68 (251)
No 1
>1p1j_A Inositol-3-phosphate synthase; 1L-MYO-inositol 1-phosphate, NADH, isomerase, rossmann fold; HET: NAI; 1.70A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.3 PDB: 1jkf_A* 1la2_A* 1p1f_A 1jki_A* 1p1i_A* 1p1h_A* 1p1k_A* 1rm0_A*
Probab=100.00 E-value=2.5e-189 Score=1483.36 Aligned_cols=505 Identities=54% Similarity=0.905 Sum_probs=494.6
Q ss_pred ccceEEeCCCeEecCceEEEEeEeeceEEEEecCCCeeeEEEeeeeeEEEEEecccCC-eEEEEEecCCCchhHHHHHHH
Q 010460 3 IENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVP-KLGVMLVGWGGNNGSTLTGGV 81 (510)
Q Consensus 3 ~~~~~v~s~~~~~~~~~i~~~y~y~~~~~~~~~~~~~~~~~~~p~~~~~~f~~~~~~~-k~GvmlvG~gGn~~TT~~ag~ 81 (510)
+++|+|+||||+||+++|+|+|+|+||+|+++ .+| +|+|+|++++|+|||++|+| |+||||||||||||||++||+
T Consensus 9 ~~~~~v~s~~~~~~~~~~~~~y~y~~t~v~~~-~~~--~~~~~p~~~~~~f~~~~~~p~k~GvmlVG~gGn~~TT~~aG~ 85 (533)
T 1p1j_A 9 ITSVKVVTDKCTYKDNELLTKYSYENAVVTKT-ASG--RFDVTPTVQDYVFKLDLKKPEKLGIMLIGLGGNNGSTLVASV 85 (533)
T ss_dssp CCEEEECCTTEEEETTEEEEEEEEEEEEEEEC-TTS--EEEEEEEEEEEEEEEECCCCSSEEEEEETTTSHHHHHHHHHH
T ss_pred cceEEEeCCCceeccceEEEEEEecccEEEec-CCC--cEEEEEeeeeEEEEecccCCcceEEEEEecCccHHHHHHHHH
Confidence 57899999999999999999999999999987 678 79999999999999999999 999999999999999999999
Q ss_pred HHHhcCCCccccccccccccccCccccceeeccc-CCCcccccccccCCCCCCCCCeeeeeccCCCCCHHHHHHHCCCCC
Q 010460 82 ISNREGISWATKDTVQQANYFGSLTQASAIRVGS-YNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFD 160 (510)
Q Consensus 82 ~A~r~gl~~~tk~g~~~~n~~Gsvtq~st~rlg~-~~~~~~~~p~~~~lPm~~~~dlv~GGwDI~~~nl~ea~~ra~Vl~ 160 (510)
+|||+||+|+||+|+++|||||||||+||||||. .+|+++|+||+++|||++|||||||||||+++||+|||.||||||
T Consensus 86 ~A~r~gl~~~tk~g~~~pny~GS~tq~stirlG~~~~~~~~~~p~~~~lpl~~p~dlVfGGWDI~~~nl~~a~~rA~VL~ 165 (533)
T 1p1j_A 86 LANKHNVEFQTKEGVKQPNYFGSMTQCSTLKLGIDAEGNDVYAPFNSLLPMVSPNDFVVSGWDINNADLYEAMQRSQVLE 165 (533)
T ss_dssp HHHHTTCCEEETTEEECCCCTTCHHHHCEEEEEECTTSCEEEEEGGGSSCCCCGGGEEEEEECSSCCCHHHHHHHHTCSC
T ss_pred HHHHcCCCcccCCccccCccccceeeeeeeeecccCCCCcccCchhhcCCCCChhheEEecccCCCCCHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999 559999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHhhhhcCCCCCCCChhhhhhhccccCCCCc--------cCCH-HHHHHHHHHHHHHHHHhcCCCeEEEEEcc
Q 010460 161 IDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVI--------KGTK-KEQMLQIIKDIREFKEKNKVDRVVVLWTA 231 (510)
Q Consensus 161 ~~l~~~l~~~l~~~~p~p~v~~~~fia~nq~~ra~nv~--------~g~k-~e~~e~ir~DIr~Fk~~~~ld~vVVlwtA 231 (510)
++||+||+|+|++|+|+|+||||+|||+||++|++|++ +|++ ||++||||+|||+||++|+||||||||||
T Consensus 166 ~~l~~~v~~~l~~i~p~p~i~~~~fia~nq~~ra~nv~~~~~g~~~~g~~~~e~ve~ir~DIr~Fk~~~~ldrvVVlwtA 245 (533)
T 1p1j_A 166 YDLQQRLKAKMSLVKPLPSIYYPDFIAANQDERANNCINLDEKGNVTTRGKWTHLQRIRRDIQNFKEENALDKVIVLWTA 245 (533)
T ss_dssp HHHHHHHHHHHTTCCCBCBCCCGGGSCGGGGGGCCCBSCBCTTSCBCSCCHHHHHHHHHHHHHHHHHHTTCSCEEEEECS
T ss_pred HHHHHHHHHHHHhCCcCccccChhHHhhhccccCCceeecccccCCCCCcHHHHHHHHHHHHHHHHHHcCCCeEEEEeCc
Confidence 99999999999999999999999999999999999999 7854 99999999999999999999999999999
Q ss_pred CCCccccccccccccHHHHHhhcccCCCccChhHHHHHHHHhcCCceeeCCCCCCCccchHHHHHHhCCccccCCCCCCc
Q 010460 232 NTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQ 311 (510)
Q Consensus 232 sTEr~~~~~~~~~dt~e~L~~al~~~~~eispS~~YA~AAi~eg~~fINgsPq~t~vP~l~elAe~~gvpi~GdD~KSGq 311 (510)
|||||+++.+++|+|+++|+++|++++++||||++||+|||+||||||||+||++++|+++|||+++|+||+||||||||
T Consensus 246 sTE~~~~~~~g~~~t~~~l~~ai~~~~~eispS~~YA~AAl~aG~~fIN~sP~~t~~P~~~elae~~gvpI~GDD~KSGq 325 (533)
T 1p1j_A 246 NTERYVEVSPGVNDTMENLLQSIKNDHEEIAPSTIFAAASILEGVPYINGSPQNTFVPGLVQLAEHEGTFIAGDDLKSGQ 325 (533)
T ss_dssp CCCCCCCCCTTTTSSHHHHHHHHHTTCTTCCHHHHHHHHHHHTTCCEEECSCSCCCCHHHHHHHHHHTCCEEESSBCCSH
T ss_pred CccCCCCCccccccCHHHHHHHHhcCCccCChHHHHHHHHHhcCCceeecCCcccCCHHHHHHHHHhCCceeccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhHHHHHHhcCCceeEEEEeeecCCccccCCCCccccchhhhhhhhHHhhhhhcCCccCCC--CCCCcceeeeccc
Q 010460 312 TKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGP--GEHPDHVVVIKYV 389 (510)
Q Consensus 312 T~lksvLa~~L~~rGlkv~s~~s~N~LGN~Dg~nLs~p~~f~SKeiSKs~vvdd~l~~~~~Ly~~--g~~~dh~v~I~Yv 389 (510)
|+|||+|++||++|||||.+||||||||||||+||++|+||+|||+||++||+||+++|++||.+ |+++||+|+||||
T Consensus 326 T~lksvLa~~l~~RGlkv~~~~s~N~lGN~Dg~NL~~p~~f~SKeiSKs~vV~dil~~~~~ly~~~~G~~~dh~V~IdYV 405 (533)
T 1p1j_A 326 TKLKSVLAQFLVDAGIKPVSIASYNHLGNNDGYNLSAPKQFRSKEISKSSVIDDIIASNDILYNDKLGKKVDHCIVIKYM 405 (533)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEEEECSHHHHHHTSHHHHHHHHHHHHHTTHHHHHTCTTTSBTTTBCCCEEEEEEEEC
T ss_pred chhHHHHHHHHHHcCCceeEEEEEEeccCcchhhhCCHhhhhhhhhHHHHHHHHHHhccccccccccCCCCCCceEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999987 8899999999999
Q ss_pred CCCCCceEEEEEEEeeecCCCeEEEEEEeeecccccchhHHHhHHHHHHHHHHhhhhhc-----cCCcccccccchhhhh
Q 010460 390 PYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAE-----GEGKFHSFHPVATILS 464 (510)
Q Consensus 390 P~lGD~K~A~De~~~e~flG~~~tI~i~~~ceDSlLAAPLilDLvrlaela~r~~~~~~-----~~~~~~~~~~V~s~lS 464 (510)
|||||+|+|||||++++|||+||+|++||+|+||+||||||||||||+|||+|+|+++. +.++|+++++|+++||
T Consensus 406 P~lGD~K~A~d~~~~~~F~G~~~~I~i~~~c~DS~lAApliIDLvrla~la~r~g~~g~~~~~~~~~~~~~~~~v~s~lS 485 (533)
T 1p1j_A 406 KPVGDSKVAMDEYYSELMLGGHNRISIHNVCEDSLLATPLIIDLLVMTEFCTRVSYKKVDPVKEDAGKFENFYPVLTFLS 485 (533)
T ss_dssp GGGTTEEEEEEEEEEECGGGCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHTEEEEECBTTBTTCSCCBCCCSBCGGGG
T ss_pred CCCCCcEEEEEEEEEeeecCCcEEEEEEEEEecchhhHHHHHHHHHHHHHHHhcCcCCcccccccccccccccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998752 5678999999999999
Q ss_pred hhccCCCCCCCCCccChHHHHHHHHHHHHHHhcCCCCCCccccccC
Q 010460 465 YLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510 (510)
Q Consensus 465 y~fKaP~~~~g~~~~n~l~~Q~~~L~n~lra~~gl~~~~~~~le~~ 510 (510)
||||+|++++|++++|+|++||++|+||+|+|+||+|+|||+||||
T Consensus 486 y~fKsP~~~~g~~~~n~L~~Qr~~lenfir~~~Gl~~~~~~~le~~ 531 (533)
T 1p1j_A 486 YWLKAPLTRPGFHPVNGLNKQRTALENFLRLLIGLPSQNELRFEER 531 (533)
T ss_dssp GGBSSCCCCTTCCCCCCHHHHHHHHHHHHHHHTTCCCCCCCCHHHH
T ss_pred HHccCCCCCCCCcccChHHHHHHHHHHHHHHhcCCCccccccceee
Confidence 9999999999999999999999999999999999999999999996
No 2
>1vko_A Inositol-3-phosphate synthase; CE21227, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD; 2.30A {Caenorhabditis elegans} SCOP: c.2.1.3 d.81.1.3
Probab=100.00 E-value=4.4e-189 Score=1482.44 Aligned_cols=502 Identities=54% Similarity=0.925 Sum_probs=492.0
Q ss_pred ccceEEeCCCeEecCceEEEEeEeeceEEEEecCCCeeeEEEeeeeeEEEEEecccCCeEEEEEecCCCchhHHHHHHHH
Q 010460 3 IENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVI 82 (510)
Q Consensus 3 ~~~~~v~s~~~~~~~~~i~~~y~y~~~~~~~~~~~~~~~~~~~p~~~~~~f~~~~~~~k~GvmlvG~gGn~~TT~~ag~~ 82 (510)
+++|+|+||||+||+++|+|+|+|+||+|+++ .+| |+|+|++++|+|||++|+||+||||||||||||||++||++
T Consensus 22 ~~~~~v~s~~~~~~~~~~~~~y~y~~t~v~~~-~~~---~~~~p~~~~~~f~~~~~~~k~GvmlVG~gGn~~TT~~aG~~ 97 (537)
T 1vko_A 22 SKRLIVESPNVKLEDGVLESRFTYRKNHFEHR-ADG---LHVTPKEHDYSFKTVLKPRKTGLLLVGLGGNNGSTAVGSIF 97 (537)
T ss_dssp -CCCCCCCTTEEEETTEEEEEEEEEEEEEEEE-TTE---EEEEEEEEEEEEEEECSCCCEEEEEETTTSHHHHHHHHHHH
T ss_pred cccEEEeCCCeEeeccEEEEEEEecceEEEEe-CCc---eEEEEEEEEEEEEeecccCceEEEEEecCccHHHHHHHHHH
Confidence 45799999999999999999999999999987 666 99999999999999999999999999999999999999999
Q ss_pred HHhcCCCccccccccccccccCccccceeeccc-CC-CcccccccccCCCCCCCCCeeeeeccCCCCCHHHHHHHCCCCC
Q 010460 83 SNREGISWATKDTVQQANYFGSLTQASAIRVGS-YN-GEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFD 160 (510)
Q Consensus 83 A~r~gl~~~tk~g~~~~n~~Gsvtq~st~rlg~-~~-~~~~~~p~~~~lPm~~~~dlv~GGwDI~~~nl~ea~~ra~Vl~ 160 (510)
|||+||+|+||+|+++|||||||||+||||||. .+ |+++|+||+++|||++|||||||||||+++||+|||.||||||
T Consensus 98 A~r~gl~~~tk~g~~~~ny~GSltq~stirlG~~~~tg~~~~~p~~~~lpl~~p~dlVfGGwDI~~~nl~~a~~rA~VLd 177 (537)
T 1vko_A 98 ANQYAMTWRTKEGHSQANYFGSVTQTATVHLGYDSATQNQIFVPFKDIVPILSPNDLIISGWDISDSNLYEAMGRAKVFE 177 (537)
T ss_dssp HHHTTCEEEETTEEEECCCTTCHHHHCEEEEEEETTTTEEEEEEGGGTSCCCCGGGEEEEEECSSCCCTTHHHHHHTCSC
T ss_pred HHHcCCCcccccCccCCccccceeeeeeEeeccccCCCcccccchhccCCCCChhhEEEecccCCCCCHHHHHHHCCCCC
Confidence 999999999999999999999999999999999 54 8899999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHhhhhcCCCCCCCChhhhhhhccccCCCCccCCH-HHHHHHHHHHHHHHHHhcCCCeEEEEEccCCCccccc
Q 010460 161 IDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTK-KEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNV 239 (510)
Q Consensus 161 ~~l~~~l~~~l~~~~p~p~v~~~~fia~nq~~ra~nv~~g~k-~e~~e~ir~DIr~Fk~~~~ld~vVVlwtAsTEr~~~~ 239 (510)
++||+||+|+|++|+|+|+||||+|||+||++|++|+++|++ ||++||||+|||+||++|+|||||||||||||||+++
T Consensus 178 ~~l~~~v~~~l~~i~p~p~i~~~~fia~nq~~ra~nv~~g~~~~e~ve~ir~DIr~Fk~~~~ldrvVVlwtAsTE~~~~~ 257 (537)
T 1vko_A 178 PELQEKLRPFMEPIVPLPSIYYPDFIASNQGDRANNVIPGDNKLEHLEHIRADIRKFKQEHELECVIVLWTANTERYTDV 257 (537)
T ss_dssp HHHHHHHHHHHTTCCCBCBCCCGGGSCGGGGGGCCSBCCSSCHHHHHHHHHHHHHHHHHHHTCSEEEEEECSCCCCCCCC
T ss_pred HHHHHHHHHHHHhCCcCCcccCHHHHhhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCCCcCCCCC
Confidence 999999999999999999999999999999999999999965 9999999999999999999999999999999999999
Q ss_pred cccccccHHHHHhhcccCCCccChhHHHHHHHHhcCCceeeCCCCCCCccchHHHHHHhCCccccCCCCCCccchhhhHH
Q 010460 240 IVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLV 319 (510)
Q Consensus 240 ~~~~~dt~e~L~~al~~~~~eispS~~YA~AAi~eg~~fINgsPq~t~vP~l~elAe~~gvpi~GdD~KSGqT~lksvLa 319 (510)
.+++|+|+++|+++|++|+++||||++||+|||+||||||||+||++++|+++|+|+++|+||+|||||||||+|||+|+
T Consensus 258 ~~g~~~t~~~L~~ai~~~~~eisaS~~YA~AAl~aG~~FIN~sP~~~~~P~~~elae~~gvpI~GDD~KSGqT~lksvLa 337 (537)
T 1vko_A 258 RQGLNATADEIMESIRVNEDEVSPSNIFAVASILEGAHYINGSPQNTLVPGLIELAERHKVFVGGDDFKSGQTKFKSAFV 337 (537)
T ss_dssp CTTTTSSHHHHHHHHHTTCSSCCHHHHHHHHHHHTTCEEEECSSSCCCCHHHHHHHHHHTCCEECSCBCCSHHHHHHHHH
T ss_pred ccccccCHHHHHHHHhcCCccCChHHHHHHHHHhcCCceeecCCcccCCHHHHHHHHHhCCceeccccccCCchhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCceeEEEEeeecCCccccCCCCccccchhhhhhhhHHhhhhhcCCccCCCCCCCcceeeecccCCCCCceEEE
Q 010460 320 DFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAM 399 (510)
Q Consensus 320 ~~L~~rGlkv~s~~s~N~LGN~Dg~nLs~p~~f~SKeiSKs~vvdd~l~~~~~Ly~~g~~~dh~v~I~YvP~lGD~K~A~ 399 (510)
+||++|||||.+||||||||||||+||++|+||+|||+||+++|+||++++++||+||+++||+|+|||||||||+|+||
T Consensus 338 ~~l~~RGlkv~~~~s~NilGN~Dg~NL~~p~~~~SKeiSKs~vV~dil~~~~~lY~~G~~~dh~V~IdYVP~lGD~K~A~ 417 (537)
T 1vko_A 338 DFLVSSGMKPESIVSYNHLGNNDGKNLSEARQFRSKEISKSSVVDDMVKSNQILFPDAKNPDYCVVIKYVPYVADSKRAM 417 (537)
T ss_dssp HHHHHTTCEEEEEEEEEEECSHHHHHTTSHHHHHHHHHHHHTTTHHHHHHCTTTCTTCCCCEEEECCEECGGGTTEEEEE
T ss_pred HHHHHcCCceeEEEEEEeccCcchhhhCCHhhhhhhhhHHHHHHHHHhccCcccccCCCCCCCceEEeecCCCCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeecCCCeEEEEEEeeecccccchhHHHhHHHHHHHHHHhhhhhccCCcccccccchhhhhhhccCCCCCCCCCcc
Q 010460 400 DEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVV 479 (510)
Q Consensus 400 De~~~e~flG~~~tI~i~~~ceDSlLAAPLilDLvrlaela~r~~~~~~~~~~~~~~~~V~s~lSy~fKaP~~~~g~~~~ 479 (510)
|+|++++|||+||+|+++|+|+||+||||||||||||+|||+|+|+++. ++|+++++|+++||||||+|++|+|++++
T Consensus 418 d~~~~~~FlG~~~~I~i~~~~~DS~lAApliIDLvrlaklA~r~g~~g~--~~~~~~~~v~s~lSy~fKsP~~~~g~~~~ 495 (537)
T 1vko_A 418 DEYICSIFMGGKQTFVVHNTCEDSLLASPLIYDLAILTELASRVSYKVD--DEYKPFHSVLSILSLLLKAPVVPPGTPIS 495 (537)
T ss_dssp EEEEEECGGGCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTEEEESS--SSEECCCSBCGGGGGGBSSCCCSTTSCCC
T ss_pred EEEEEeeecCCcEEEEEEEEEecchhhHHHHHHHHHHHHHHHhcccCCc--cccccccchhhHHHHHccCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999998643 68999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCCccccccC
Q 010460 480 NALSKQRAMLENILRACVGLAPENNMILEYK 510 (510)
Q Consensus 480 n~l~~Q~~~L~n~lra~~gl~~~~~~~le~~ 510 (510)
|+|++||++|+||+|+|+||+|++||+||||
T Consensus 496 n~L~~Qr~~Lenfir~~~Gl~~~~~~~le~~ 526 (537)
T 1vko_A 496 NAFMRQFSTLTKLVTALAGFPSDTDMQIEFF 526 (537)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCCCTTSCGGGT
T ss_pred chHHHHHHHHHHHHHHhcCCCccccccceee
Confidence 9999999999999999999999999999996
No 3
>3qvs_A MIPS, MYO-inositol-1-phosphate synthase (INO1); NAD binding rossmann fold, L-MYO-inositol 1-phosphate syntha isomerase; HET: NAD PG4; 1.70A {Archaeoglobus fulgidus} PDB: 1u1i_A* 3qvt_A* 3qvw_A* 3qvx_A* 3qw2_A*
Probab=100.00 E-value=3e-138 Score=1070.84 Aligned_cols=381 Identities=26% Similarity=0.341 Sum_probs=366.0
Q ss_pred EEEEEecCCCchhHHHHHHHHHHhcCCCccccccccccccccCccccceeecccCCCcccccccccCCCCCCCCCeeeee
Q 010460 62 LGVMLVGWGGNNGSTLTGGVISNREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGG 141 (510)
Q Consensus 62 ~GvmlvG~gGn~~TT~~ag~~A~r~gl~~~tk~g~~~~n~~Gsvtq~st~rlg~~~~~~~~~p~~~~lPm~~~~dlv~GG 141 (510)
+||||||||||||||++||++|||+|++|+| |++||. |+.++|||++||||||||
T Consensus 1 ~Gv~lvG~gG~vaTT~~aG~~A~k~gl~~~~----------G~~~~~---------------~~~~~lpl~~~~Dlv~GG 55 (392)
T 3qvs_A 1 MKVWLVGAYGIVSTTAMVGARAIERGIAPKI----------GLVSEL---------------PHFEGIEKYAPFSFEFGG 55 (392)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHHTTCSCCT----------TCGGGS---------------GGGTTGGGTSCSCCEEEE
T ss_pred CceEEecCCccHHHHHHHHHHHHHcCCCCcc----------cccccC---------------cccccCCCCChhhEEEee
Confidence 5999999999999999999999999999987 888883 444599999999999999
Q ss_pred ccCCC-CCHHHHHH----HCCCCCHhHHHHHHHhhhhcCCCCCCCChhhhhhhccccCCCCcc---CCHHHHHHHHHHHH
Q 010460 142 WDISD-MNLADAMA----RARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIK---GTKKEQMLQIIKDI 213 (510)
Q Consensus 142 wDI~~-~nl~ea~~----ra~Vl~~~l~~~l~~~l~~~~p~p~v~~~~fia~nq~~ra~nv~~---g~k~e~~e~ir~DI 213 (510)
|||++ +||+|||. ||+|||++||+||+|+|++|+|+|++|+|+|++. |..|++|+++ +|++|++||||+||
T Consensus 56 wDI~~~~~l~~aa~~~~~~a~Vl~~~l~~~v~~~L~~i~p~~~~~~~~~~~~-~~~~~~~~l~~~~~t~~e~ve~ir~DI 134 (392)
T 3qvs_A 56 HEIRLLSNAYEAAKEHWELNRHFDREILEAVKSDLEGIVARKGTALNCGSGI-KELGDIKTLEGEGLSLAEMVSRIEEDI 134 (392)
T ss_dssp EESSCCSCHHHHHHHHHHHHCCSCHHHHHHTHHHHHTCCCEECCCTTCCGGG-GGGCSCCCSGGGTCCHHHHHHHHHHHH
T ss_pred eeCCCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHhCCccccccccchhhh-hcccccccccCCCCCHHHHHHHHHHHH
Confidence 99999 99999988 8999999999999999999999999999999876 9999999964 38999999999999
Q ss_pred HHHHHhcCCCeEEEEEccCCCccccccccccccHHHHHhhcccCCCcc-ChhHHHHHHHHhcCCceeeCCCC-CCCccch
Q 010460 214 REFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEI-SPSTLYAIACVLENIPFINGSPQ-NTFVPGL 291 (510)
Q Consensus 214 r~Fk~~~~ld~vVVlwtAsTEr~~~~~~~~~dt~e~L~~al~~~~~ei-spS~~YA~AAi~eg~~fINgsPq-~t~vP~l 291 (510)
|+||+ ||||||||||||||+++.+++|+|+|+|+++|++|++|| |||++||+||++||||||||+|| ++++|++
T Consensus 135 r~Fk~----d~vVVlw~asTE~~~~~~~~~~~t~~~l~~ai~~~~~ei~spS~~YA~AAl~ag~~fvN~~P~~~a~~P~~ 210 (392)
T 3qvs_A 135 KSFAD----DETVVINVASTEPLPNYSEEYHGSLEGFERMIDEDRKEYASASMLYAYAALKLGLPYANFTPSPGSAIPAL 210 (392)
T ss_dssp HHHCC----TTEEEEECSCCCCCCCCCHHHHSSHHHHHHHHHTTCGGGCCHHHHHHHHHHHTTCCEEECSSSCTTCSHHH
T ss_pred HHhhc----CCEEEEECCCCCCCCCCCcccccCHHHHHHHHhcCCccccChHHHHHHHHHHcCCCeeecCCccccCCHHH
Confidence 99999 999999999999999999999999999999999999999 99999999999999999999999 5799999
Q ss_pred HHHHHHhCCccccCCCCCCccchhhhHHHHHHhcCCceeEEEEeeecCCccccCCCCccccchhhhhhhhHHhhhhhcCC
Q 010460 292 IDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNG 371 (510)
Q Consensus 292 ~elAe~~gvpi~GdD~KSGqT~lksvLa~~L~~rGlkv~s~~s~N~LGN~Dg~nLs~p~~f~SKeiSKs~vvdd~l~~~~ 371 (510)
+|+|+++|+||+|||||||||++||+|++||++||+||.+||||||||||||+||++|+||+|||+||+++|+||+
T Consensus 211 ~ela~~~g~pi~GdD~KsGqT~~ks~La~~l~~Rglkv~~~~q~N~lGN~Dg~nL~~~~~~~SK~iSKs~vv~~~l---- 286 (392)
T 3qvs_A 211 KELAEKKGVPHAGNDGKTGETLVKTTLAPMFAYRNMEVVGWMSYNILGDYDGKVLSARDNKESKVLSKDKVLEKML---- 286 (392)
T ss_dssp HHHHHHHTCEEECSSBCCSHHHHHHHHHHHHHHTTCEEEEEEEEEEECHHHHHHTTSHHHHHHHHHHHHTHHHHHH----
T ss_pred HHHHHHcCCCEecCcccCCCchHHHHHHHHHHHcCCceeEEEEEeccccchhhhhCCHhHhhhhhhHHHHHHHHHh----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCcceeeecccCCCCCceEEEEEEEeeecCCCeEEEEEEeeecccccchhHHHhHHHHHHHHHHhhhhhccCC
Q 010460 372 ILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEG 451 (510)
Q Consensus 372 ~Ly~~g~~~dh~v~I~YvP~lGD~K~A~De~~~e~flG~~~tI~i~~~ceDSlLAAPLilDLvrlaela~r~~~~~~~~~ 451 (510)
|++++|+|+|+||||+||+|+|||+|++++|||+||+|++||+|+||+||||||||||||+|+|+|+|
T Consensus 287 -----g~~~~~~v~I~Yvp~lGD~K~a~d~i~~~~F~G~~~~i~~~~~~~DS~laAplviDlvrl~~la~~~g------- 354 (392)
T 3qvs_A 287 -----GYSPYSITEIQYFPSLVDNKTAFDFVHFKGFLGKLMKFYFIWDAIDAIVAAPLILDIARFLLFAKKKG------- 354 (392)
T ss_dssp -----SSCCEEEEEEEECGGGTTCCEEEEEEEEECGGGCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHTT-------
T ss_pred -----CCCCCCceEEeecCCCCCceEEEEEEEeeeeCCCcEEEEEEEEEecchhhHHHHHHHHHHHHHHHhcC-------
Confidence 67889999999999999999999999999999999999999999999999999999999999999986
Q ss_pred cccccccchhhhhhhccCCCCCCCCCccChHHHHHHHHHHHHHHh
Q 010460 452 KFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRAC 496 (510)
Q Consensus 452 ~~~~~~~V~s~lSy~fKaP~~~~g~~~~n~l~~Q~~~L~n~lra~ 496 (510)
++++++++|||||+|++++ .|+|++||++|+||+|.+
T Consensus 355 ----~~G~l~~ls~~~K~P~~~~----~~~l~~q~~~l~~~~r~~ 391 (392)
T 3qvs_A 355 ----VKGVVKEMAFFFKSPMDTN----VINTHEQFVVLKEWYSNL 391 (392)
T ss_dssp ----CCEECGGGGGGBSSCTTCC----CCCHHHHHHHHHHHHHHH
T ss_pred ----CCCchHHHHHHhcCCCCCC----CCcHHHHHHHHHHHHHhc
Confidence 4788999999999999864 489999999999999975
No 4
>3cin_A MYO-inositol-1-phosphate synthase-related protein; structura genomics, joint center for structural genomics, JCSG; HET: NAD; 1.70A {Thermotoga maritima MSB8}
Probab=100.00 E-value=2.6e-103 Score=814.85 Aligned_cols=372 Identities=22% Similarity=0.336 Sum_probs=328.6
Q ss_pred CeEEEEEecCCCchhHHHHHHHHHHhcCCCccccccccccccccCccccceeecccCCCcccccccccCCCCCCCCCeee
Q 010460 60 PKLGVMLVGWGGNNGSTLTGGVISNREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVF 139 (510)
Q Consensus 60 ~k~GvmlvG~gGn~~TT~~ag~~A~r~gl~~~tk~g~~~~n~~Gsvtq~st~rlg~~~~~~~~~p~~~~lPm~~~~dlv~ 139 (510)
.-++|||||+ ||||||+++|++++|+|+.- ++.+|+.+.+|+..+|++||
T Consensus 12 ~mIrVaIvGv-GnvASTlvqGv~~~r~g~~~-----------------------------~~G~p~~~~~p~~~~Di~vv 61 (394)
T 3cin_A 12 HMVKVLILGQ-GYVASTFVAGLEKLRKGEIE-----------------------------PYGVPLARELPIGFEDIKIV 61 (394)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHHHTTSSC-----------------------------CTTCTTTTCSSSCGGGEEEE
T ss_pred ceeEEEEecC-CHHHHHHHHHHHHHHcCCCC-----------------------------CccccccccCCCCCCCcEEE
Confidence 3589999998 79999999999999999852 22257778899999999999
Q ss_pred eeccCCCCCHHHHHHHCCCCCHhHHHHHHHhhhhcCCCCCCCChhhhhhhccccCCCCcc-CCHHHHHHHHHHHHHHH-H
Q 010460 140 GGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIK-GTKKEQMLQIIKDIREF-K 217 (510)
Q Consensus 140 GGwDI~~~nl~ea~~ra~Vl~~~l~~~l~~~l~~~~p~p~v~~~~fia~nq~~ra~nv~~-g~k~e~~e~ir~DIr~F-k 217 (510)
|||||+..++++.|. +.+..+...+.+++.+ |++....+..+..|... +++.+..+++++||++| |
T Consensus 62 gg~DId~~kvgk~l~----------eAi~~~~n~~~~~~~~--p~~~~~v~~~~~~~~~~~~~~~~~~~~~~e~i~~~~k 129 (394)
T 3cin_A 62 GSYDVDRAKIGKKLS----------EVVKQYWNDVDSLTSD--PEIRKGVHLGSVRNLPIEAEGLEDSMTLKEAVDTLVK 129 (394)
T ss_dssp EEEECBTTTTTSBHH----------HHHHHHCTTCCCCSSC--CBCEECCCTTTTTTSSCCBCCGGGSSCHHHHHHHHHH
T ss_pred EEecCCcchhHHHHH----------HHHhhchhccccccCc--cccccCcccccccCcCccccchhhhhhHHHhHHHHHH
Confidence 999999988876554 4456666666666553 77777778777777643 35566667788888887 6
Q ss_pred HhcCCCeEEEEEccCCCccccccccccccHHHHHhhcccCCCc-cChhHHHHHHHH-----hcCCceeeCCCCCCC-ccc
Q 010460 218 EKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAE-ISPSTLYAIACV-----LENIPFINGSPQNTF-VPG 290 (510)
Q Consensus 218 ~~~~ld~vVVlwtAsTEr~~~~~~~~~dt~e~L~~al~~~~~e-ispS~~YA~AAi-----~eg~~fINgsPq~t~-vP~ 290 (510)
+.+++|++||||+||||+|.++ .+.+++++++++++.+ ++||++||+||+ ++|||||||+|+++. +|+
T Consensus 130 ~~~~~~~~Vvvn~asTE~ylpv-----gs~~~~~~a~~~~~~~~i~as~~YA~AAl~~aa~~aG~~fvN~~P~~ia~~P~ 204 (394)
T 3cin_A 130 EWTELDPDVIVNTCTTEAFVPF-----GNKEDLLKAIENNDKERLTATQVYAYAAALYANKRGGAAFVNVIPTFIANDPA 204 (394)
T ss_dssp HHHHHCCSEEEECCCCCCCCCC-----SSHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHTCEEEEECSSSCSTTCHH
T ss_pred HhhhccceeEeeecccccCCCC-----CCHHHHHHHhhccccccCChhHHHHHHHHHhhhhhcCCceecCCCccccCcHH
Confidence 6688999999999999999853 5889999999988776 999999999999 789999999998875 799
Q ss_pred hHHHHHHhCCccccCCCCCCccchhhhHHHHHHhcCCceeEEEEeeecCCccccCCCCccccchhhhhhhhHHhhhhhcC
Q 010460 291 LIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSN 370 (510)
Q Consensus 291 l~elAe~~gvpi~GdD~KSGqT~lksvLa~~L~~rGlkv~s~~s~N~LGN~Dg~nLs~p~~f~SKeiSKs~vvdd~l~~~ 370 (510)
++|+|+++|+||+|||||||||+|||+|++||++||++|.+|||||||||+||+||++|+||+|||+||+++|++|+++
T Consensus 205 ~~ela~~~gvpi~GdD~ktG~T~~k~~L~~~l~~rgl~v~~~~q~N~lGN~Dg~nl~~~~~~~sK~~SK~~vv~~~l~~- 283 (394)
T 3cin_A 205 FVELAKENNLVVFGDDGATGATPFTADVLSHLAQRNRYVKDVAQFNIGGNMDFLALTDDGKNKSKEFTKSSIVKDILGY- 283 (394)
T ss_dssp HHHHHHHTTEEEECSSBSCSHHHHHHHHHHHHHHTTCEEEEEEEEEEECCGGGGSSCHHHHHHHHHHHSCCHHHHHHSS-
T ss_pred HHHHHHHcCCcEecccccccchhHHHHHHHHHHHCCCeEeEEEEEeecccchhhHhCCHhhhhhHHHHHHHHHHHHhhc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999963
Q ss_pred CccCCCCCCCcceeeecccCCCCCceEEEEEEEeeecCCCeEEEEEEeeecccccchhHHHhHHHHHHHHHHhhhhhccC
Q 010460 371 GILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGE 450 (510)
Q Consensus 371 ~~Ly~~g~~~dh~v~I~YvP~lGD~K~A~De~~~e~flG~~~tI~i~~~ceDSlLAAPLilDLvrlaela~r~~~~~~~~ 450 (510)
..++|+++|+||||+||+|+|||+|++++|||+||+|+++|+|+||+||||||||||||+++|+|.|
T Consensus 284 -------~~~~h~~~~~Yvp~lgD~K~a~~~ie~~~f~g~~~~i~~~~~~~DS~laAplviDlir~~~la~~~g------ 350 (394)
T 3cin_A 284 -------DAPHYIKPTGYLEPLGDKKFIAIHIEYVSFNGATDELMINGRINDSPALGGLLVDLVRLGKIALDRK------ 350 (394)
T ss_dssp -------CCCEECCCCEECGGGTTEEEEEEEEEEECGGGCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHTT------
T ss_pred -------cccccccccCCCCcCCCCeEEEEEEEEEEecCcceEEEEEeEEechhhhHHHHHHHHHHHHHHHHhc------
Confidence 3578999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CcccccccchhhhhhhccCCCCCCCCCccChHHHHHHHHHHHHHHhcCCCCC
Q 010460 451 GKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 502 (510)
Q Consensus 451 ~~~~~~~~V~s~lSy~fKaP~~~~g~~~~n~l~~Q~~~L~n~lra~~gl~~~ 502 (510)
.+|+++++||||||+|+.+.+.++ |++.+++++|+|+||+|+
T Consensus 351 ----~~g~v~~~~s~~~K~P~~~~~~~~------~~~~~~~~lr~~~g~~p~ 392 (394)
T 3cin_A 351 ----EFGTVYPVNAFYMKNPGPAEEKNI------PRIIAYEKMRIWAGLKPK 392 (394)
T ss_dssp ----CCEECHHHHHHHBSSCSSTTCCCC------CHHHHHHHHHHHTTCCCC
T ss_pred ----CCCcchhHHHHHcCCCCCCCCCcH------HHHHHHHHHHHHcCCCcc
Confidence 578999999999999998876655 566777779999999996
No 5
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=100.00 E-value=8.6e-103 Score=801.37 Aligned_cols=346 Identities=21% Similarity=0.215 Sum_probs=292.1
Q ss_pred cccCCeEEEEEecCCCchhHHHHHHHHHHhcCCCccccccccccccccCccccceeecccCCCcccccccccCCCCCCCC
Q 010460 56 DVHVPKLGVMLVGWGGNNGSTLTGGVISNREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPD 135 (510)
Q Consensus 56 ~~~~~k~GvmlvG~gGn~~TT~~ag~~A~r~gl~~~tk~g~~~~n~~Gsvtq~st~rlg~~~~~~~~~p~~~~lPm~~~~ 135 (510)
+++..|+|+ ||| ||+|||+++|++|+|+|++|.++.|+... ++. +++|+
T Consensus 12 ~~~~~rVaI--VGv-GN~GsaLv~Gi~~yk~~~~~~~~~Gl~~~---------------------------~~g-~~~~~ 60 (367)
T 1gr0_A 12 ASTEVRVAI--VGV-GNCASSLVQGVEYYYNADDTSTVPGLMHV---------------------------RFG-PYHVR 60 (367)
T ss_dssp --CCEEEEE--ECC-SHHHHHHHHHHHHTTTCCTTSCCTTCSCS---------------------------EET-TEEGG
T ss_pred hccCCCEEE--ECc-ChHHHHHHHHHHHHhccCcccccCCcccc---------------------------ccC-CccCC
Confidence 456678877 999 79999999999999999999998875432 233 46799
Q ss_pred Ce-eeeeccCCCCCHHHHHHHCCCCCHhHHHHHHHhhh--hcCCCCCCCChhhhhhhccccCCCCccCCHHHHHHHHHHH
Q 010460 136 DI-VFGGWDISDMNLADAMARARVFDIDLQKQLRPYME--SMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQIIKD 212 (510)
Q Consensus 136 dl-v~GGwDI~~~nl~ea~~ra~Vl~~~l~~~l~~~l~--~~~p~p~v~~~~fia~nq~~ra~nv~~g~k~e~~e~ir~D 212 (510)
|+ +++||||++.+++++|.+|+|++++++.|++ +|. .++|+|++| +||++++|. |++.++. +++.|
T Consensus 61 Di~iVaafDId~~KVG~~l~~A~~~~~n~~~~~~-~v~~~~v~v~~g~~-ldgia~~~~----~~i~~s~-----~~~~D 129 (367)
T 1gr0_A 61 DVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIA-DVAPTNVIVQRGPT-LDGIGKYYA----DTIELSD-----AEPVD 129 (367)
T ss_dssp GEEEEEEEECBTTTTTSBHHHHTTSTTCCCCCCS-CCCCCCCBCEECCC-TTSCCHHHH----TTSCBCS-----SCCCC
T ss_pred CeEEEEEEcCChHHHHHHhhCCEecCCCchhhhh-cccccCceEccCCC-CCchhhhhh----hcccccc-----chhhH
Confidence 99 6999999999999999999999999999999 998 899999999 999999995 6777753 47889
Q ss_pred HHHHHHhcCCCeEEEEEccCCCccccccccccccHHHHHhhcccCCCccChhHHHHHHHHhcCCceeeCCCCCCC-ccch
Q 010460 213 IREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTF-VPGL 291 (510)
Q Consensus 213 Ir~Fk~~~~ld~vVVlwtAsTEr~~~~~~~~~dt~e~L~~al~~~~~eispS~~YA~AAi~eg~~fINgsPq~t~-vP~l 291 (510)
||+|++++++| |||.| ++.| .++||++||+||++||||||||+||+++ +|++
T Consensus 130 i~~~~~~~~~d-VvV~~------------------------lp~g--s~~aS~~YA~Aal~ag~~fvN~~P~~~~~~P~~ 182 (367)
T 1gr0_A 130 VVQALKEAKVD-VLVSY------------------------LPVG--SEEADKFYAQCAIDAGVAFVNALPVFIASDPVW 182 (367)
T ss_dssp HHHHHHHTTCS-EEEEC------------------------CCTT--CHHHHHHHHHHHHHHTCEEEECSSCCSTTSHHH
T ss_pred HHHHHHHhCCc-EEEEe------------------------eeCC--CcCHHHHHHHHHHHcCCceEecCCccccCCHHH
Confidence 99999999999 77777 2233 3479999999999999999999999997 8999
Q ss_pred HHHHHHhCCccccCCCC--CCccchhhhHHHHHHhcCCceeEEEEeeecCCccccCCCCccccchhhhhhhhHHhhhhhc
Q 010460 292 IDLAIRRNCLIGGDDFK--SGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSS 369 (510)
Q Consensus 292 ~elAe~~gvpi~GdD~K--SGqT~lksvLa~~L~~rGlkv~s~~s~N~LGN~Dg~nLs~p~~f~SKeiSKs~vvdd~l~~ 369 (510)
+|+|+++|+||+||||| ||||++||+|++||++||+||++||||||||||||+||++|+||+|||+||+++|++|+++
T Consensus 183 ~el~~~~g~pi~GdD~Ksq~G~T~~k~~La~~l~~rg~kv~~~~q~N~lGN~D~~nL~~~~~~~sK~iSKs~vv~~~l~~ 262 (367)
T 1gr0_A 183 AKKFTDARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNMLERERLESKKISKTQAVTSNLKR 262 (367)
T ss_dssp HHHHHHHTCEEEESSBCCSSCHHHHHHHHHHHHHHTTCEEEEEEEEEEECSHHHHHHHC---------------------
T ss_pred HHHHHHcCCCEeccccccccCCChHHHHHHHHHHHcCCceeEEEEEeccCchhhhhhCChhhhhhhhhHHHHHHHHHhcc
Confidence 99999999999999999 8999999999999999999999999999999999999999999999999999999999964
Q ss_pred CCccCCCCCCCcceeee---cccCCCCCceEEEEEEEeeecCCCeEEEEEEeeecccccchhHHHhHHHHHHHHHHhhhh
Q 010460 370 NGILYGPGEHPDHVVVI---KYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLK 446 (510)
Q Consensus 370 ~~~Ly~~g~~~dh~v~I---~YvP~lGD~K~A~De~~~e~flG~~~tI~i~~~ceDSlLAAPLilDLvrlaela~r~~~~ 446 (510)
. .++|+|+| +||||+||+|+|||+|++++|||+||+|+++|+|+||+||||||||||||+|+|+|+|+
T Consensus 263 ~--------~~d~~v~Igps~Yvp~lgD~K~a~d~i~~~~F~G~~~~i~~~~~~~DS~laAplviDlvrl~~la~~~g~- 333 (367)
T 1gr0_A 263 E--------FKTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGI- 333 (367)
T ss_dssp -------------CEECSEEEECGGGTTEEEEEEEEEEEEGGGEEEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred C--------CCCCcEEECccccCCcCCCceEEEEEEEeeecCCCcEEEEEEEEEecchhhHHHHHHHHHHHHHHHhcCC-
Confidence 2 14677777 99999999999999999999999999999999999999999999999999999999984
Q ss_pred hccCCcccccccchhhhhhhccCCCCCCCCCccChHHHHHHHHHHHHH
Q 010460 447 AEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILR 494 (510)
Q Consensus 447 ~~~~~~~~~~~~V~s~lSy~fKaP~~~~g~~~~n~l~~Q~~~L~n~lr 494 (510)
.|++.+++|||||+|++++ ...++|+++++|++
T Consensus 334 ---------~G~v~~~ssy~~K~P~~~~------~~~~a~~~~~~fi~ 366 (367)
T 1gr0_A 334 ---------GGPVIPASAYLMKSPPEQL------PDDIARAQLEEFII 366 (367)
T ss_dssp ---------CEECHHHHHHHBSSCSSCC------CHHHHHHHHHHHHH
T ss_pred ---------CcchhHHHHHHccCCCCCC------CHHHHHHHHHHHhc
Confidence 3688999999999999986 45789999999997
No 6
>1vjp_A MYO-inositol-1-phosphate synthase-related protein; TM1419, structural genomics, JCSG, PSI, protein structure initiative; HET: NAD; 1.70A {Thermotoga maritima} PDB: 3cin_A*
Probab=100.00 E-value=2.8e-91 Score=719.08 Aligned_cols=362 Identities=22% Similarity=0.304 Sum_probs=298.1
Q ss_pred eEEEEEecCCCchhHHHHHHHHHHhcCCCccccccccccccccCccccceeecccCCCcccccccccCCCCCCCCCee-e
Q 010460 61 KLGVMLVGWGGNNGSTLTGGVISNREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIV-F 139 (510)
Q Consensus 61 k~GvmlvG~gGn~~TT~~ag~~A~r~gl~~~tk~g~~~~n~~Gsvtq~st~rlg~~~~~~~~~p~~~~lPm~~~~dlv-~ 139 (510)
-+.|+++|.| |+||+++.|+...|+|.... .|+ |+.+++|. .|.||. +
T Consensus 13 ~~~~~~~GvG-n~ASslvqGie~yk~~~~~~--~Gl---------------------------~~~~~~~y-~~~Dievv 61 (394)
T 1vjp_A 13 MVKVLILGQG-YVASTFVAGLEKLRKGEIEP--YGV---------------------------PLARELPI-GFEDIKIV 61 (394)
T ss_dssp CEEEEEECCS-HHHHHHHHHHHHHHTTSSCC--TTC---------------------------TTTTCSSS-CGGGEEEE
T ss_pred eeeeEEEEeh-HHHHHHHHHHHHHHcCCCCC--ccc---------------------------cchhccCC-CcCceEEE
Confidence 4679999996 99999999999999993211 133 12233343 577875 8
Q ss_pred eeccCCCC----CHHHHHHHC-CCCCHhHHHHHHHhhhhcCCCCCCCChhhhhhhccccCCCCccC-CHHHHHHHHHHHH
Q 010460 140 GGWDISDM----NLADAMARA-RVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKG-TKKEQMLQIIKDI 213 (510)
Q Consensus 140 GGwDI~~~----nl~ea~~ra-~Vl~~~l~~~l~~~l~~~~p~p~v~~~~fia~nq~~ra~nv~~g-~k~e~~e~ir~DI 213 (510)
++|||... +|+||..+. .. +.+.|..++-+++.--.-.-.-. ....+.... +..|.+++|++++
T Consensus 62 aafDVd~~KVGkdl~eai~~~pn~--------Vp~~l~~V~V~~G~~ldg~~~~~--~~~~~~~e~~s~~e~v~~vv~~l 131 (394)
T 1vjp_A 62 GSYDVDRAKIGKKLSEVVKQYWND--------VDSLTSDPEIRKGVHLGSVRNLP--IEAEGLEDSMTLKEAVDTLVKEW 131 (394)
T ss_dssp EEEECBTTTTTSBHHHHHHHHCTT--------CCCCSSCCBCEECCCTTTTTTSS--CCBCCGGGSSCHHHHHHHHHHHH
T ss_pred EEEeccccccCCcHHHHHhhCcCC--------CCcccCCCEEEeccccCcccccc--hhhhccccccchhhHHHHHHHHH
Confidence 99999987 789988752 22 22333344333332110000000 001111112 3477788777776
Q ss_pred HHHHHhcCCCeEEEEEccCCCccccccccccccHHHHHhhcccCC-CccChhHHHHHHHHh-----cCCceeeCCCCCC-
Q 010460 214 REFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNE-AEISPSTLYAIACVL-----ENIPFINGSPQNT- 286 (510)
Q Consensus 214 r~Fk~~~~ld~vVVlwtAsTEr~~~~~~~~~dt~e~L~~al~~~~-~eispS~~YA~AAi~-----eg~~fINgsPq~t- 286 (510)
+++ ++| ||||++|||||+++ +|.++|+++|++|+ ++||||++||+||++ +|||||||+|+.+
T Consensus 132 k~~----~~D--VvIn~~STE~~~p~-----gs~~~l~~ai~~~~~~~i~aS~~YA~AAl~~~~~~aG~~fVN~~P~~ia 200 (394)
T 1vjp_A 132 TEL----DPD--VIVNTCTTEAFVPF-----GNKEDLLKAIENNDKERLTATQVYAYAAALYANKRGGAAFVNVIPTFIA 200 (394)
T ss_dssp HHH----CCS--EEEECCCCCCCCCC-----SSHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHTCEEEEECSSSCST
T ss_pred HHc----CCC--EEEEecCccCCCCC-----CCHHHHHHHHhcCCCCccChHHHHHHHHHhhccccCCcceEecCCcccc
Confidence 555 466 89999999999974 59999999999998 579999999999999 9999999999753
Q ss_pred CccchHHHHHHhCCccccCCCCCCccchhhhHHHHHHhcCCceeEEEEeeecCCccccCCCCccccchhhhhhhhHHhhh
Q 010460 287 FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDM 366 (510)
Q Consensus 287 ~vP~l~elAe~~gvpi~GdD~KSGqT~lksvLa~~L~~rGlkv~s~~s~N~LGN~Dg~nLs~p~~f~SKeiSKs~vvdd~ 366 (510)
.+|+++|+|+++|+||+|||||||||+|||+|++||++||++|++||||||||||||+||++|+||+|||+||+++|+||
T Consensus 201 ~~P~~~ela~~~gvpi~GDD~ktGqT~lks~La~~l~~Rglkv~~~~q~NilGN~Dg~nL~~p~~~~SKeiSKs~vv~d~ 280 (394)
T 1vjp_A 201 NDPAFVELAKENNLVVFGDDGATGATPFTADVLSHLAQRNRYVKDVAQFNIGGNMDFLALTDDGKNKSKEFTKSSIVKDI 280 (394)
T ss_dssp TCHHHHHHHHHTTEEEECSSBSCSHHHHHHHHHHHHHHTTCEEEEEEEEEEECCGGGGSSCHHHHHHHHHHHSCCHHHHH
T ss_pred CCHHHHHHHHHcCCCEEccccCCCCCchHHHHHHHHHHcCCceeEEEEEeccccchhhhhCCHhHhhhhhhHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCccCCCCCCCcceeeecccCCCCCceEEEEEEEeeecCCCeEEEEEEeeecccccchhHHHhHHHHHHHHHHhhhh
Q 010460 367 VSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLK 446 (510)
Q Consensus 367 l~~~~~Ly~~g~~~dh~v~I~YvP~lGD~K~A~De~~~e~flG~~~tI~i~~~ceDSlLAAPLilDLvrlaela~r~~~~ 446 (510)
++++ .++|+++|+||||+||+|+|||+|++++|||+||+|+++|+|+||+|||||||||+||+|+|+|+|
T Consensus 281 l~~~--------~~~hi~~i~Yvp~lGD~K~A~d~ie~~~FlG~~~~i~~~~~~~DS~lAAplviDlvrla~la~~~g-- 350 (394)
T 1vjp_A 281 LGYD--------APHYIKPTGYLEPLGDKKFIAIHIEYVSFNGATDELMINGRINDSPALGGLLVDLVRLGKIALDRK-- 350 (394)
T ss_dssp HSSC--------CCEECCCCEECGGGTTEEEEEEEEEEECGGGCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred hcCC--------CCccccccccCCcCCCceEEEEEEEeeecCCCcEEEEEEEEEecchhhHHHHHHHHHHHHHHHHhc--
Confidence 9754 468999999999999999999999999999999999999999999999999999999999999987
Q ss_pred hccCCcccccccchhhhhhhccCC-CCCCCCCccChHHHHHHHHHHHHHH
Q 010460 447 AEGEGKFHSFHPVATILSYLTKAP-LVPPGTPVVNALSKQRAMLENILRA 495 (510)
Q Consensus 447 ~~~~~~~~~~~~V~s~lSy~fKaP-~~~~g~~~~n~l~~Q~~~L~n~lra 495 (510)
.+|++.+++|||||+| +.+ .+. .++.+|+++|++|++.
T Consensus 351 --------~~G~v~~~~sy~~K~P~P~~--~~~-~~~~~a~~~l~~f~~~ 389 (394)
T 1vjp_A 351 --------EFGTVYPVNAFYMKNPGPAE--EKN-IPRIIAYEKMRIWAGL 389 (394)
T ss_dssp --------CCEECHHHHHHHBSSCSSTT--CCC-CCHHHHHHHHHHHTTC
T ss_pred --------CCCcchHHHHHHccCCCCCC--CCC-chHHHHHHHHHHHHhh
Confidence 5799999999999999 663 444 3688999999999874
No 7
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=86.49 E-value=2.9 Score=41.62 Aligned_cols=136 Identities=11% Similarity=0.075 Sum_probs=71.9
Q ss_pred CCCccCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCCccccccccccccHHH---HHhhcccCCCcc---ChhHHHH
Q 010460 195 NNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVEN---LLASLDKNEAEI---SPSTLYA 268 (510)
Q Consensus 195 ~nv~~g~k~e~~e~ir~DIr~Fk~~~~ld~vVVlwtAsTEr~~~~~~~~~dt~e~---L~~al~~~~~ei---spS~~YA 268 (510)
|....|.++...+.+.+-.++..+ .| -.+|=|..-||.+-.+.++.. +..+. ++++|....-.| +...--|
T Consensus 17 DSFsdgg~~~~~~~a~~~a~~~v~-~G-AdiIDIGgestrpga~~v~~~-eE~~Rv~pvi~~l~~~~~piSIDT~~~~va 93 (280)
T 1eye_A 17 DSFSDGGCYLDLDDAVKHGLAMAA-AG-AGIVDVGGESSRPGATRVDPA-VETSRVIPVVKELAAQGITVSIDTMRADVA 93 (280)
T ss_dssp CTTCSSCCCCSHHHHHHHHHHHHH-TT-CSEEEEECC---------------HHHHHHHHHHHHHTTCCEEEECSCHHHH
T ss_pred CCcCCCcccCCHHHHHHHHHHHHH-CC-CCEEEECCccCCCCCCCCCHH-HHHHHHHHHHHHhhcCCCEEEEeCCCHHHH
Confidence 333334333334444444444444 34 357888888998865433322 23332 333343222223 3445568
Q ss_pred HHHHhcCCceeeCCCCCCCccchHHHHHHhCCccccCCCCC-Cccc----------hhh------hHHHHHHhcCCceeE
Q 010460 269 IACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKS-GQTK----------MKS------VLVDFLVGAGIKPTS 331 (510)
Q Consensus 269 ~AAi~eg~~fINgsPq~t~vP~l~elAe~~gvpi~GdD~KS-GqT~----------lks------vLa~~L~~rGlkv~s 331 (510)
.||+++|++.||-.--....|.+.+++.+.|+|+..--.+. -+|. +.. -.++.+..+|++...
T Consensus 94 ~aAl~aGa~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~ 173 (280)
T 1eye_A 94 RAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPAR 173 (280)
T ss_dssp HHHHHTTCCEEEETTTTSSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 89999999999988754468999999999999977644321 1121 111 345556788998655
Q ss_pred EE
Q 010460 332 IV 333 (510)
Q Consensus 332 ~~ 333 (510)
|+
T Consensus 174 Ii 175 (280)
T 1eye_A 174 LV 175 (280)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 8
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=83.56 E-value=5.4 Score=39.67 Aligned_cols=135 Identities=10% Similarity=0.098 Sum_probs=81.0
Q ss_pred CCCccCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCCccccccccccccHHH---HHhhcccC-CCcc---ChhHHH
Q 010460 195 NNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVEN---LLASLDKN-EAEI---SPSTLY 267 (510)
Q Consensus 195 ~nv~~g~k~e~~e~ir~DIr~Fk~~~~ld~vVVlwtAsTEr~~~~~~~~~dt~e~---L~~al~~~-~~ei---spS~~Y 267 (510)
|....|.+....+.+.+-.++..++ | -.+|=|...||.|.++.++. .+..+. ++++|... .-.| +...--
T Consensus 26 dSFsdgg~~~~~~~a~~~a~~~v~~-G-AdiIDIGgestrPga~~v~~-~eE~~rv~pvi~~l~~~~~~piSIDT~~~~v 102 (282)
T 1aj0_A 26 DSFSDGGTHNSLIDAVKHANLMINA-G-ATIIDVGGESTRPGAAEVSV-EEELQRVIPVVEAIAQRFEVWISVDTSKPEV 102 (282)
T ss_dssp TTSCCCCCCTHHHHHHHHHHHHHHH-T-CSEEEEESSCCSTTCCCCCH-HHHHHHHHHHHHHHHHHCCCEEEEECCCHHH
T ss_pred CccccccccCCHHHHHHHHHHHHHC-C-CCEEEECCCcCCCCCCcCCH-HHHHHHHHHHHHHHHhhcCCeEEEeCCCHHH
Confidence 3333344444455555555555553 4 35888888899887654432 233333 33333321 1122 345556
Q ss_pred HHHHHhcCCceeeCCCCCCCccchHHHHHHhCCccccCCCCC-Cccc---------------hhhhHHHHHHhcCCceeE
Q 010460 268 AIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKS-GQTK---------------MKSVLVDFLVGAGIKPTS 331 (510)
Q Consensus 268 A~AAi~eg~~fINgsPq~t~vP~l~elAe~~gvpi~GdD~KS-GqT~---------------lksvLa~~L~~rGlkv~s 331 (510)
|.||+++|++.||-.--. ..|.+.+++.+.|+|+..--.+. -+|. .=.-.++.+..+|++...
T Consensus 103 a~aAl~aGa~iINdvsg~-~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~ 181 (282)
T 1aj0_A 103 IRESAKVGAHIINDIRSL-SEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEK 181 (282)
T ss_dssp HHHHHHTTCCEEEETTTT-CSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHcCCCEEEECCCC-CCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 889999999999987754 68999999999999987644421 1221 112245556788998755
Q ss_pred EE
Q 010460 332 IV 333 (510)
Q Consensus 332 ~~ 333 (510)
|+
T Consensus 182 Ii 183 (282)
T 1aj0_A 182 LL 183 (282)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 9
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=80.21 E-value=8.6 Score=38.58 Aligned_cols=136 Identities=10% Similarity=0.052 Sum_probs=70.2
Q ss_pred CCCCccCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCCccccccccccccHHH---HHhhcccCCCcc---ChhHHH
Q 010460 194 ANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVEN---LLASLDKNEAEI---SPSTLY 267 (510)
Q Consensus 194 a~nv~~g~k~e~~e~ir~DIr~Fk~~~~ld~vVVlwtAsTEr~~~~~~~~~dt~e~---L~~al~~~~~ei---spS~~Y 267 (510)
.|....|.++...+.+.+-.++..++ | -.+|=|..-||.|..+.++.- +..+. +++++....-.| +...--
T Consensus 39 PDSFsdgg~~~~~~~a~~~a~~~v~~-G-AdIIDIGgeSTrPga~~v~~~-eE~~Rv~pvI~~l~~~~vpiSIDT~~~~V 115 (294)
T 2dqw_A 39 PDSFSDGGRYLDPERALERAREMVAE-G-ADILDLGAESTRPGAAPVPVE-EEKRRLLPVLEAVLSLGVPVSVDTRKPEV 115 (294)
T ss_dssp C-------------CCHHHHHHHHHH-T-CSEEEEECC-----------C-CHHHHHHHHHHHHHTTCSCEEEECSCHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHC-C-CCEEEECCCcCCCCCCCCCHH-HHHHHHHHHHHHHHhCCCeEEEECCCHHH
Confidence 34444455544455555555555543 4 468899998998875544322 33333 334443322223 345567
Q ss_pred HHHHHhcCCceeeCCCCCCCccchHHHHHHhCCccccCCCC--CCccc---------------hhhhHHHHHHhcCCcee
Q 010460 268 AIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFK--SGQTK---------------MKSVLVDFLVGAGIKPT 330 (510)
Q Consensus 268 A~AAi~eg~~fINgsPq~t~vP~l~elAe~~gvpi~GdD~K--SGqT~---------------lksvLa~~L~~rGlkv~ 330 (510)
|.||+++|+..||-.--. ..|.+.+++.+.|+++..--.+ .-+|. .=.-.++.+..+|++ .
T Consensus 116 a~aAl~aGa~iINdVsg~-~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~-~ 193 (294)
T 2dqw_A 116 AEEALKLGAHLLNDVTGL-RDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVP-Q 193 (294)
T ss_dssp HHHHHHHTCSEEECSSCS-CCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCS-C
T ss_pred HHHHHHhCCCEEEECCCC-CChHHHHHHHHhCCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHHCCCC-c
Confidence 889999999999998765 6899999999999997774443 12232 112245666788998 4
Q ss_pred EEEE
Q 010460 331 SIVS 334 (510)
Q Consensus 331 s~~s 334 (510)
=|.-
T Consensus 194 IilD 197 (294)
T 2dqw_A 194 VVLD 197 (294)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 4444
No 10
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=79.99 E-value=13 Score=37.21 Aligned_cols=139 Identities=10% Similarity=0.112 Sum_probs=84.2
Q ss_pred cccCCCCccCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCCccccccccccccHHHHH---hhcccC-CCcc---Ch
Q 010460 191 GSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLL---ASLDKN-EAEI---SP 263 (510)
Q Consensus 191 ~~ra~nv~~g~k~e~~e~ir~DIr~Fk~~~~ld~vVVlwtAsTEr~~~~~~~~~dt~e~L~---~al~~~-~~ei---sp 263 (510)
+...|....|.+....+.+.+-.++..+ .| -.+|=|...||.|-.+.++. .+..+.++ ++|... .-.| +.
T Consensus 47 NvTPDSFsdgg~~~~~~~a~~~a~~~v~-~G-AdiIDIGgeStrPga~~v~~-~eE~~RvvpvI~~l~~~~~vpiSIDT~ 123 (297)
T 1tx2_A 47 NVTPDSFSDGGSYNEVDAAVRHAKEMRD-EG-AHIIDIGGESTRPGFAKVSV-EEEIKRVVPMIQAVSKEVKLPISIDTY 123 (297)
T ss_dssp CCCCCTTCSSCBHHHHHHHHHHHHHHHH-TT-CSEEEEESCC----CCCCCH-HHHHHHHHHHHHHHHHHSCSCEEEECS
T ss_pred eCCCCccccCCccCCHHHHHHHHHHHHH-cC-CCEEEECCCcCCCCCCCCCH-HHHHHHHHHHHHHHHhcCCceEEEeCC
Confidence 3344554556666666777777777664 45 45888888899877654332 23334344 444431 1122 34
Q ss_pred hHHHHHHHHhcCCceeeCCCCCCCccchHHHHHHhCCccccCCCCCCccc----------hhhhHHHHHHhcCCceeEEE
Q 010460 264 STLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTK----------MKSVLVDFLVGAGIKPTSIV 333 (510)
Q Consensus 264 S~~YA~AAi~eg~~fINgsPq~t~vP~l~elAe~~gvpi~GdD~KSGqT~----------lksvLa~~L~~rGlkv~s~~ 333 (510)
..--+.||+++|++.||-.-.....|.+.+++.+.|+++..--. .|+.. .=.-+++.+..+|++...|+
T Consensus 124 ~~~V~~aAl~aGa~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~-~G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~Ii 202 (297)
T 1tx2_A 124 KAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHN-RDNMNYRNLMADMIADLYDSIKIAKDAGVRDENII 202 (297)
T ss_dssp CHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHHTCCEEEECC-CSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeC-CCCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEE
Confidence 55568899999999999877544689999999999999776443 23221 11224556678899865443
No 11
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=69.99 E-value=50 Score=33.51 Aligned_cols=41 Identities=24% Similarity=0.158 Sum_probs=31.8
Q ss_pred eeecccCCCcccccccccCCCCCCCCCeeeeeccCCCCCHHHHHH
Q 010460 110 AIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMA 154 (510)
Q Consensus 110 t~rlg~~~~~~~~~p~~~~lPm~~~~dlv~GGwDI~~~nl~ea~~ 154 (510)
++++| |+.+.+-|+--.++.||-=+.++=||+.+. ..+++.
T Consensus 32 ~~~iG---Ge~vlpf~r~e~~~~n~p~iam~V~D~~pe-~~~~v~ 72 (323)
T 4djd_D 32 TIVVG---GDAALPFHHFEGEIVNRPVIGMEVQDIVPD-WPDVLK 72 (323)
T ss_dssp CEEEE---CCCSSTTCGGGSCCCSCCEEEEEEESSCCS-CCHHHH
T ss_pred EEEEC---CcceecccccCCCCCCCCeEEEEEecCCcc-chhhHH
Confidence 45556 677765566678999999999999999998 666555
No 12
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=69.76 E-value=6.6 Score=39.35 Aligned_cols=111 Identities=11% Similarity=0.067 Sum_probs=65.0
Q ss_pred cCCCCccCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCCccccccccccccHHH---HHhhcccCCCcc---ChhHH
Q 010460 193 RANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVEN---LLASLDKNEAEI---SPSTL 266 (510)
Q Consensus 193 ra~nv~~g~k~e~~e~ir~DIr~Fk~~~~ld~vVVlwtAsTEr~~~~~~~~~dt~e~---L~~al~~~~~ei---spS~~ 266 (510)
..|....|.++...+.+.+-.++..+ .| -.+|=|...||.|-.+.++. .+..+. +++++....-.| +...-
T Consensus 32 TPDSFsdgg~~~~~~~a~~~a~~~v~-~G-AdiIDIGgeSTrPga~~v~~-~eE~~Rv~pvi~~l~~~~vpiSIDT~~~~ 108 (294)
T 2y5s_A 32 TPDSFSDGGRFLARDDALRRAERMIA-EG-ADLLDIGGESTRPGAPPVPL-DEELARVIPLVEALRPLNVPLSIDTYKPA 108 (294)
T ss_dssp CC----------CTTHHHHHHHHHHH-TT-CSEEEEESSCCSTTCCCCCH-HHHHHHHHHHHHHHGGGCSCEEEECCCHH
T ss_pred CCCCCCCCCCcCCHHHHHHHHHHHHH-CC-CCEEEECCCcCCCCCCCCCH-HHHHHHHHHHHHHHhhCCCeEEEECCCHH
Confidence 33444445444444555554455554 34 46889999999987654432 223333 333443222222 34556
Q ss_pred HHHHHHhcCCceeeCCCCCCCccchHHHHHHhCCccccCCC
Q 010460 267 YAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDF 307 (510)
Q Consensus 267 YA~AAi~eg~~fINgsPq~t~vP~l~elAe~~gvpi~GdD~ 307 (510)
-|.||+++|++.||-.--.. .|.+.+++.+.|+|+..--.
T Consensus 109 Va~aAl~aGa~iINdVsg~~-d~~m~~~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 109 VMRAALAAGADLINDIWGFR-QPGAIDAVRDGNSGLCAMHM 148 (294)
T ss_dssp HHHHHHHHTCSEEEETTTTC-STTHHHHHSSSSCEEEEECC
T ss_pred HHHHHHHcCCCEEEECCCCC-chHHHHHHHHhCCCEEEECC
Confidence 68899999999999887545 89999999999999776443
No 13
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=63.88 E-value=30 Score=34.85 Aligned_cols=171 Identities=11% Similarity=0.134 Sum_probs=89.3
Q ss_pred eeecccCCCcccccccccCCCCCCCCCeeeeeccCCCCCHHHHHHH--CCCCCHhHHHHHHHhhhhcCCCCCCCChhhhh
Q 010460 110 AIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMAR--ARVFDIDLQKQLRPYMESMVPLPGIYDPDFIA 187 (510)
Q Consensus 110 t~rlg~~~~~~~~~p~~~~lPm~~~~dlv~GGwDI~~~nl~ea~~r--a~Vl~~~l~~~l~~~l~~~~p~p~v~~~~fia 187 (510)
++++| |+..++-|+--.++.++-=+++|=||+-+....+.+.. ..+++ +.++..+...++ -.|+|.
T Consensus 25 ~~~~G---Ge~~~~~~~~e~~~~~~p~i~m~I~n~tpdsf~d~i~~~~~~~~~-~~~~~A~~~v~~--------GAdiID 92 (310)
T 2h9a_B 25 TVTLG---GDSTLPFLTFEGEMPNPPRFALEVFDTPPTDWPDILVEPFKDVIN-DPVAWAKKCVEY--------GADIVA 92 (310)
T ss_dssp CEEEE---CCSSSTTCTTSSCCCSCCEEEEEEESSCCSSCCHHHHGGGTTTTT-CHHHHHHHHHHT--------TCSEEE
T ss_pred EEEEC---CCccccceecCcCCCCCCeEEEEEeeCCCcccchhhhhhhccHHH-HHHHHHHHHHHc--------CCcEEE
Confidence 45555 77767777777899999988999999999888887552 22221 222222222210 112222
Q ss_pred hhcc-ccCCCCccCCHHH---HHHHHHHHHHHHHHhcCCCeEEEE-EccCCCccccccccccccHHHHHhhcccCCCccC
Q 010460 188 ANQG-SRANNVIKGTKKE---QMLQIIKDIREFKEKNKVDRVVVL-WTANTERYSNVIVGLNDTVENLLASLDKNEAEIS 262 (510)
Q Consensus 188 ~nq~-~ra~nv~~g~k~e---~~e~ir~DIr~Fk~~~~ld~vVVl-wtAsTEr~~~~~~~~~dt~e~L~~al~~~~~eis 262 (510)
-+-+ .|.+. .+-+..| .++.|++ . +|-.|.| .|+|.|.
T Consensus 93 Ig~~StrP~~-~~vs~eee~~vV~~v~~-------~--~~vplsI~DT~~~~~--------------------------- 135 (310)
T 2h9a_B 93 LRLVSAHPDG-QNRSGAELAEVCKAVAD-------A--IDVPLMIIGCGVEEK--------------------------- 135 (310)
T ss_dssp EECGGGCTTT-TCCCHHHHHHHHHHHHH-------H--CSSCEEEECCSCHHH---------------------------
T ss_pred EeCccCCCCC-CCCCHHHHHHHHHHHHH-------h--CCceEEEECCCCCCC---------------------------
Confidence 1111 11110 0001111 2222221 1 2334444 3333222
Q ss_pred hhHHHHHHHHhcCCc---eeeCCCCCCCccchHHHHHHhCCccccCCCCCCccchhhhHHHHHHhcCCceeEEE
Q 010460 263 PSTLYAIACVLENIP---FINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIV 333 (510)
Q Consensus 263 pS~~YA~AAi~eg~~---fINgsPq~t~vP~l~elAe~~gvpi~GdD~KSGqT~lksvLa~~L~~rGlkv~s~~ 333 (510)
..--+.||+++|+. .||..-.. ..|.+.++|.+.|+++..--... -.+=.-+++.+.+.|++...|+
T Consensus 136 -~~~V~eaal~aga~~k~iINdvs~~-~~~~~~~~aa~~g~~vv~m~~~d--v~~l~~~~~~a~~~Gi~~e~Ii 205 (310)
T 2h9a_B 136 -DAEIFPVIGEALSGRNCLLSSATKD-NYKPIVATCMVHGHSVVASAPLD--INLSKQLNIMIMEMNLAPNRII 205 (310)
T ss_dssp -HHHHHHHHHHHTTTSCCEEEEECTT-THHHHHHHHHHHTCEEEEECSSC--HHHHHHHHHHHHTTTCCGGGEE
T ss_pred -CHHHHHHHHHhCCCCCCEEEECCCC-ccHHHHHHHHHhCCCEEEEChhH--HHHHHHHHHHHHHCCCChhhEE
Confidence 22234567777774 88876543 47899999999999876632210 1222335666778888766554
No 14
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=63.62 E-value=15 Score=37.06 Aligned_cols=107 Identities=9% Similarity=0.065 Sum_probs=60.1
Q ss_pred CCCccCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCCccccccccccccHHH---HHhhcccC-CCcc---ChhHHH
Q 010460 195 NNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVEN---LLASLDKN-EAEI---SPSTLY 267 (510)
Q Consensus 195 ~nv~~g~k~e~~e~ir~DIr~Fk~~~~ld~vVVlwtAsTEr~~~~~~~~~dt~e~---L~~al~~~-~~ei---spS~~Y 267 (510)
|....|.++...+.+.+-.++..++ | -.+|=|..-||-|-.+.++. .+..+. ++++|... .-.| +...--
T Consensus 21 DSFsdgg~~~~~~~a~~~a~~~v~~-G-AdIIDIGgeSTrPGa~~v~~-~eE~~Rv~pvI~~l~~~~~vpiSIDT~~~~V 97 (314)
T 2vef_A 21 DSFSDGGQFFALEQALQQARKLIAE-G-ASMLDIGGESTRPGSSYVEI-EEEIQRVVPVIKAIRKESDVLISIDTWKSQV 97 (314)
T ss_dssp ---------CHHHHHHHHHHHHHHT-T-CSEEEEECCC-----CHHHH-HHHHHHHHHHHHHHHHHCCCEEEEECSCHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHC-C-CCEEEECCCcCCCCCCCCCH-HHHHHHHHHHHHHHHhhCCceEEEeCCCHHH
Confidence 3333455555566666666666653 4 46888999899886643321 122332 33334332 1122 244556
Q ss_pred HHHHHhcCCceeeCCCCCCCccchHHHHHHhCCcccc
Q 010460 268 AIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGG 304 (510)
Q Consensus 268 A~AAi~eg~~fINgsPq~t~vP~l~elAe~~gvpi~G 304 (510)
|.||+++|++.||-.--..+.|.+.+++.+.|+|+..
T Consensus 98 a~aAl~aGa~iINDVsg~~~d~~m~~v~a~~~~~vvl 134 (314)
T 2vef_A 98 AEAALAAGADLVNDITGLMGDEKMPHVVAEARAQVVI 134 (314)
T ss_dssp HHHHHHTTCCEEEETTTTCSCTTHHHHHHHHTCEEEE
T ss_pred HHHHHHcCCCEEEECCCCCCChHHHHHHHHcCCCEEE
Confidence 8899999999999776545679999999999998765
No 15
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=57.06 E-value=24 Score=35.80 Aligned_cols=109 Identities=9% Similarity=-0.001 Sum_probs=55.4
Q ss_pred cCCCCccCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCCccccccccccccHHHH---HhhcccC--CCcc---Chh
Q 010460 193 RANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENL---LASLDKN--EAEI---SPS 264 (510)
Q Consensus 193 ra~nv~~g~k~e~~e~ir~DIr~Fk~~~~ld~vVVlwtAsTEr~~~~~~~~~dt~e~L---~~al~~~--~~ei---spS 264 (510)
..|....|.++...+.+.+-.++..++ | -.+|=|...||.+- +.++. .+..+.+ +++|... +-.| +..
T Consensus 51 TPDSFsdgg~~~~~~~a~~~A~~~v~~-G-AdIIDIGgeSTrPG-~~v~~-~eEl~Rv~pvI~~l~~~~~~vpISIDT~~ 126 (318)
T 2vp8_A 51 TPDSFYDKGATFSDAAARDAVHRAVAD-G-ADVIDVGGVKAGPG-ERVDV-DTEITRLVPFIEWLRGAYPDQLISVDTWR 126 (318)
T ss_dssp -------------CHHHHHHHHHHHHT-T-CSEEEEC-----------CH-HHHHHHHHHHHHHHHHHSTTCEEEEECSC
T ss_pred CCCcccCCCccCCHHHHHHHHHHHHHC-C-CCEEEECCCcCCCC-CCCCH-HHHHHHHHHHHHHHHhhCCCCeEEEeCCC
Confidence 334444455555555555555555553 4 35788888899876 32221 2233333 4444432 1122 344
Q ss_pred HHHHHHHHhcCCceeeCCCCCCCccchHHHHHHhCCccccCC
Q 010460 265 TLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDD 306 (510)
Q Consensus 265 ~~YA~AAi~eg~~fINgsPq~t~vP~l~elAe~~gvpi~GdD 306 (510)
.--|.||+++|+..||-.--.. .|.+.+++.+.|+++..--
T Consensus 127 ~~VaeaAl~aGa~iINDVsg~~-d~~m~~vaa~~g~~vVlmh 167 (318)
T 2vp8_A 127 AQVAKAACAAGADLINDTWGGV-DPAMPEVAAEFGAGLVCAH 167 (318)
T ss_dssp HHHHHHHHHHTCCEEEETTSSS-STTHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHhCCCEEEECCCCC-chHHHHHHHHhCCCEEEEC
Confidence 5568899999999999877543 8999999999999977644
No 16
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=56.09 E-value=21 Score=36.27 Aligned_cols=111 Identities=13% Similarity=0.109 Sum_probs=68.5
Q ss_pred cCCCeEEEEEccCCCcccc----ccccccccHH---HHHhhcccC-CCcc---ChhHHHHHHHHhcCCceeeCCCCCCCc
Q 010460 220 NKVDRVVVLWTANTERYSN----VIVGLNDTVE---NLLASLDKN-EAEI---SPSTLYAIACVLENIPFINGSPQNTFV 288 (510)
Q Consensus 220 ~~ld~vVVlwtAsTEr~~~----~~~~~~dt~e---~L~~al~~~-~~ei---spS~~YA~AAi~eg~~fINgsPq~t~v 288 (510)
.|.| +|-|..-||-|..+ .++. .+..+ -++++|... .-.| +...--|.||+++|++.||-.--.. .
T Consensus 61 ~GAd-IIDIGgeSTrPga~~~~~~V~~-~eE~~Rv~pvI~~l~~~~~vpISIDT~~~~Va~aAl~aGa~iINDVsg~~-~ 137 (314)
T 3tr9_A 61 EGAD-ILDIGGEATNPFVDIKTDSPST-QIELDRLLPVIDAIKKRFPQLISVDTSRPRVMREAVNTGADMINDQRALQ-L 137 (314)
T ss_dssp TTCS-EEEEECCCSCTTC-----CHHH-HHHHHHHHHHHHHHHHHCCSEEEEECSCHHHHHHHHHHTCCEEEETTTTC-S
T ss_pred CCCC-EEEECCCCCCCCcccccCCCCH-HHHHHHHHHHHHHHHhhCCCeEEEeCCCHHHHHHHHHcCCCEEEECCCCC-c
Confidence 4554 88888889998765 2321 12222 233344332 1222 2334567899999999999887544 7
Q ss_pred cchHHHHHHhCCccccCCCCC-Cccc-----------hh---hhHHHHHHhcCCceeEEE
Q 010460 289 PGLIDLAIRRNCLIGGDDFKS-GQTK-----------MK---SVLVDFLVGAGIKPTSIV 333 (510)
Q Consensus 289 P~l~elAe~~gvpi~GdD~KS-GqT~-----------lk---svLa~~L~~rGlkv~s~~ 333 (510)
|.+.+++.+.|+|+.--..+. -+|. +. .-.++.+..+||+...|+
T Consensus 138 ~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~Ii 197 (314)
T 3tr9_A 138 DDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRII 197 (314)
T ss_dssp TTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred hHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHEE
Confidence 899999999999987644332 2231 11 224456788899876665
No 17
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=49.11 E-value=28 Score=36.64 Aligned_cols=130 Identities=8% Similarity=0.102 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCC-eEEEEEccCCCccccccc--cccccHHHHHhhccc-----CCCccChhHHHHHHHHhc
Q 010460 203 KEQMLQIIKDIREFKEKNKVD-RVVVLWTANTERYSNVIV--GLNDTVENLLASLDK-----NEAEISPSTLYAIACVLE 274 (510)
Q Consensus 203 ~e~~e~ir~DIr~Fk~~~~ld-~vVVlwtAsTEr~~~~~~--~~~dt~e~L~~al~~-----~~~eispS~~YA~AAi~e 274 (510)
..+++.|++....++++.+.+ +++-+...+.++.....+ .+.++.+.+++.-+- --+...+..-|+.+|+++
T Consensus 23 ~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~tp~~~~h~~~~~~AL~a 102 (444)
T 3mtj_A 23 GGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELIGGLEPARELVMQAIAN 102 (444)
T ss_dssp HHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECCCSSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHHc
Confidence 457888888888888876655 566666656555433221 234455666552110 011123456788999999
Q ss_pred CCceeeCCCCCC--CccchHHHHHHhCCccccCCCCCCccchhhhHHHHHHhcCCceeEEEE
Q 010460 275 NIPFINGSPQNT--FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVS 334 (510)
Q Consensus 275 g~~fINgsPq~t--~vP~l~elAe~~gvpi~GdD~KSGqT~lksvLa~~L~~rGlkv~s~~s 334 (510)
|.+-+-.-|..+ ....+.++|+++|+.+.=.=.-.|...+-+.|-+.| +|=++.++..
T Consensus 103 GKhVvtenkal~a~~~~eL~~~A~~~gv~l~~Ea~V~~giPii~~LrelL--~~~~Ig~I~G 162 (444)
T 3mtj_A 103 GKHVVTANKHLVAKYGNEIFAAAQAKGVMVTFEAAVAGGIPIIKALREGL--TANRIEWLAG 162 (444)
T ss_dssp TCEEEECCHHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCHHHHHHTTT--TTSCEEEEEE
T ss_pred CCEEEECCcccCHHHHHHHHHHHHHhCCeEEEEEeeeCChHHHHHHHHHH--hCCCCceEEE
Confidence 999998888422 147899999999998743222346778778888876 4455666654
No 18
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=41.30 E-value=35 Score=34.24 Aligned_cols=129 Identities=16% Similarity=0.135 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCC-eEEEEEccCCCccccc-----------cccccc--cHHHHHhhcccC-CCccChh---
Q 010460 203 KEQMLQIIKDIREFKEKNKVD-RVVVLWTANTERYSNV-----------IVGLND--TVENLLASLDKN-EAEISPS--- 264 (510)
Q Consensus 203 ~e~~e~ir~DIr~Fk~~~~ld-~vVVlwtAsTEr~~~~-----------~~~~~d--t~e~L~~al~~~-~~eispS--- 264 (510)
..++++|++.-..+ ++.+.+ +++-+...+.++..++ ...+.+ +.+.+++.-+.+ --+.+|+
T Consensus 15 ~~~~~~l~~~~~~l-~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iDvVv~~tp~~~h 93 (327)
T 3do5_A 15 QGVAELLIRKREEI-EKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYDVLIEASVTRVD 93 (327)
T ss_dssp HHHHHHHHHTHHHH-HHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCSEEEECCCCC--
T ss_pred HHHHHHHHhhHHHH-HhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCCEEEECCCCccc
Confidence 34666666554445 555555 5555555554443320 011233 566665542111 1123444
Q ss_pred ----HHHHHHHHhcCCceeeCCCCC--CCccchHHHHHHhCCccccCCCCCCccchhhhHHHHHHhcCCceeEEEE
Q 010460 265 ----TLYAIACVLENIPFINGSPQN--TFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVS 334 (510)
Q Consensus 265 ----~~YA~AAi~eg~~fINgsPq~--t~vP~l~elAe~~gvpi~GdD~KSGqT~lksvLa~~L~~rGlkv~s~~s 334 (510)
.-|+.+|+++|.+.|-....+ ...+.+.++|+++|+.+.=.=.-.|...+=+.|-++| +|=++.++..
T Consensus 94 ~~~a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~~ea~v~~g~Pii~~l~~~l--~~~~I~~I~G 167 (327)
T 3do5_A 94 GGEGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYEATVGGAMPVVKLAKRYL--ALCEIESVKG 167 (327)
T ss_dssp --CHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEECGGGSSTTSCCHHHHHTTT--TTSCEEEEEE
T ss_pred chhHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEEEEEEeeecCHHHHHHHHHh--hCCCccEEEE
Confidence 357889999999999883332 2357899999999996653223346677777777776 5666666654
No 19
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=39.53 E-value=18 Score=35.08 Aligned_cols=37 Identities=22% Similarity=0.181 Sum_probs=31.1
Q ss_pred hHHHHHHHHhcCCceeeCCCCCCCccchHHHHHHhCCccc
Q 010460 264 STLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIG 303 (510)
Q Consensus 264 S~~YA~AAi~eg~~fINgsPq~t~vP~l~elAe~~gvpi~ 303 (510)
+.-.+.+|+++|+.|| -+|+ +.|.+++.+.+.|+|+.
T Consensus 95 t~~~a~~Ai~AGA~fI-vsP~--~~~~vi~~~~~~gi~~i 131 (232)
T 4e38_A 95 NGEQALAAKEAGATFV-VSPG--FNPNTVRACQEIGIDIV 131 (232)
T ss_dssp SHHHHHHHHHHTCSEE-ECSS--CCHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHcCCCEE-EeCC--CCHHHHHHHHHcCCCEE
Confidence 4556788999999999 6886 68999999999999964
No 20
>2kxe_A DNA polymerase II small subunit; D-family, archara, helical BU transferase; HET: DNA; NMR {Pyrococcus horikoshii}
Probab=39.08 E-value=15 Score=29.89 Aligned_cols=63 Identities=29% Similarity=0.406 Sum_probs=47.5
Q ss_pred HHHHhhcccCCCccChhHHHHHHHH-hcCCceeeCCCCCCC-ccchHHHHHHhCCccccCCCCCCccchhhhHHHHHHhc
Q 010460 248 ENLLASLDKNEAEISPSTLYAIACV-LENIPFINGSPQNTF-VPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGA 325 (510)
Q Consensus 248 e~L~~al~~~~~eispS~~YA~AAi-~eg~~fINgsPq~t~-vP~l~elAe~~gvpi~GdD~KSGqT~lksvLa~~L~~r 325 (510)
|.|++.|-.|.--|.||..|-.--- ++| -| ++.++..|+.+|.+|.-+++ --+||...
T Consensus 5 delVk~L~~n~YLiTPsAYyLL~~~ykkg----------~FsL~ELiKFAksrgtFvId~~l----------A~EFL~~k 64 (75)
T 2kxe_A 5 DEFVKGLMKNGYLITPSAYYLLVGHFNEG----------KFSLIELIKFAKSRETFIIDDEI----------ANEFLKSI 64 (75)
T ss_dssp CHHHHHHHTTTCEECHHHHHHHHHHHHTT----------SSCHHHHHHHHHHHTCSEECHHH----------HHHHHHHH
T ss_pred HHHHHHHHHCCceeCchHHHHHHHHhhcc----------cccHHHHHHHHHhcCcEEechHH----------HHHHHHhc
Confidence 5688888888888999998865443 233 13 78999999999999886554 34788888
Q ss_pred CCcee
Q 010460 326 GIKPT 330 (510)
Q Consensus 326 Glkv~ 330 (510)
|+.|.
T Consensus 65 G~~~~ 69 (75)
T 2kxe_A 65 GAEVE 69 (75)
T ss_dssp TCCCC
T ss_pred Cceec
Confidence 87663
No 21
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=38.16 E-value=1e+02 Score=30.63 Aligned_cols=102 Identities=13% Similarity=0.196 Sum_probs=61.4
Q ss_pred cCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCCccccccccccccHHH---HHhhcccCCCccCh---hHHHHHHHH
Q 010460 199 KGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVEN---LLASLDKNEAEISP---STLYAIACV 272 (510)
Q Consensus 199 ~g~k~e~~e~ir~DIr~Fk~~~~ld~vVVlwtAsTEr~~~~~~~~~dt~e~---L~~al~~~~~eisp---S~~YA~AAi 272 (510)
.|.+....++..+-.+.+-+ .|.| +|=|=.-||=|-++.++. .+..+. ++++|..-.-.||= ..--|.+|+
T Consensus 22 DGG~~~~~~~a~~~a~~m~~-~GAd-iIDIGgeSTRPga~~vs~-eeE~~Rv~pvi~~l~~~~v~iSIDT~~~~Va~~al 98 (270)
T 4hb7_A 22 DGGKFNNVETAINRVKAMID-EGAD-IIDVGGVSTRPGHEMVTL-EEELNRVLPVVEAIVGFDVKISVDTFRSEVAEACL 98 (270)
T ss_dssp -----CHHHHHHHHHHHHHH-TTCS-EEEEESCCCSTTCCCCCH-HHHHHHHHHHHHHHTTSSSEEEEECSCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHH-CCCC-EEEECCccCCCCCCCCch-HHHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHH
Confidence 35454455555555555554 4655 666666799888765542 223332 33444432222321 123478999
Q ss_pred hcCCceeeCCCCCCCccchHHHHHHhCCccc
Q 010460 273 LENIPFINGSPQNTFVPGLIDLAIRRNCLIG 303 (510)
Q Consensus 273 ~eg~~fINgsPq~t~vP~l~elAe~~gvpi~ 303 (510)
++|+..||-.-...+.|.+.+++.+.++|+.
T Consensus 99 ~aGa~iINDVs~g~~d~~m~~~va~~~~~~v 129 (270)
T 4hb7_A 99 KLGVDMINDQWAGLYDHRMFQIVAKYDAEII 129 (270)
T ss_dssp HHTCCEEEETTTTSSCTHHHHHHHHTTCEEE
T ss_pred HhccceeccccccccchhHHHHHHHcCCCeE
Confidence 9999999987655568999999999999976
No 22
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=36.93 E-value=31 Score=34.69 Aligned_cols=68 Identities=12% Similarity=-0.007 Sum_probs=51.2
Q ss_pred HHHHHHHHhcCCceeeCCCCCC--CccchHHHHHHhCCccccCCCCCCccchhhhHHHHHHhcCCceeEEEE
Q 010460 265 TLYAIACVLENIPFINGSPQNT--FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVS 334 (510)
Q Consensus 265 ~~YA~AAi~eg~~fINgsPq~t--~vP~l~elAe~~gvpi~GdD~KSGqT~lksvLa~~L~~rGlkv~s~~s 334 (510)
.-++.+|+++|+.-|-+.+... ..+.+.++|+++|+.+.=.=.-.|..++=+.|-++| .|=++.++..
T Consensus 100 ~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~~~~~Ea~vg~giPii~~l~~~l--~g~~I~~i~G 169 (325)
T 3ing_A 100 YSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSKYIRYEATVAGGVPLFSVLDYSI--LPSKVKRFRG 169 (325)
T ss_dssp HHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCCHHHHHHTC--TTCCEEEEEE
T ss_pred HHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCCeEEEEeeecccCHHHHHHHHHh--hCCCeeEEEE
Confidence 4678999999999997766422 357899999999997644444457788888888887 6777777763
No 23
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=36.46 E-value=77 Score=34.44 Aligned_cols=100 Identities=10% Similarity=0.119 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHhc-CCC--eEEEEEccCCCccccccccccccHHH---HHhhcccC-C---Cc--c---ChhHHHHH
Q 010460 205 QMLQIIKDIREFKEKN-KVD--RVVVLWTANTERYSNVIVGLNDTVEN---LLASLDKN-E---AE--I---SPSTLYAI 269 (510)
Q Consensus 205 ~~e~ir~DIr~Fk~~~-~ld--~vVVlwtAsTEr~~~~~~~~~dt~e~---L~~al~~~-~---~e--i---spS~~YA~ 269 (510)
..+.+.+-.+++-++- .|. .+|=|..-||.|-++.+.. .+..+. ++++|.+. . .. | +...--|.
T Consensus 247 ~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~-eEEl~RvvpvI~~i~~~~~~~~~~vpISIDT~~a~Vae 325 (545)
T 2bmb_A 247 DIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASE-EEEIRRSIPLIKAIRESTELPQDKVILSIDTYRSNVAK 325 (545)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCH-HHHHHHHHHHHHHHHHCSSSCGGGEEEEEECCCHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCH-HHHHHHHHHHHHHHHhhccccCCCCeEEEeCCcHHHHH
Confidence 4455555555555443 233 4566666699887654432 223333 34444320 0 11 2 23345688
Q ss_pred HHHhcCCceeeCCCCCCCccchHHHHHHh-CCccccC
Q 010460 270 ACVLENIPFINGSPQNTFVPGLIDLAIRR-NCLIGGD 305 (510)
Q Consensus 270 AAi~eg~~fINgsPq~t~vP~l~elAe~~-gvpi~Gd 305 (510)
||+++|+..||-.--..+.|.+.+++.+. |+++.--
T Consensus 326 aAl~aGadIINDVsg~~~d~~m~~vva~~~~~~vVlm 362 (545)
T 2bmb_A 326 EAIKVGVDIINDISGGLFDSNMFAVIAENPEICYILS 362 (545)
T ss_dssp HHHHTTCCEEEETTTTSSCTTHHHHHHTCTTSEEEEE
T ss_pred HHHHcCCCEEEeCCCCcCChHHHHHHHHhCCCeEEEE
Confidence 99999999999776555689999999999 9986653
No 24
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=36.04 E-value=37 Score=31.32 Aligned_cols=66 Identities=12% Similarity=0.104 Sum_probs=36.6
Q ss_pred HHHHHHHHhcCCCeEEEEEccCCCccccccccccccHHHHHhhcccCCCccChhHHHHHHHHhcCCceeeCCCCCCCccc
Q 010460 211 KDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPG 290 (510)
Q Consensus 211 ~DIr~Fk~~~~ld~vVVlwtAsTEr~~~~~~~~~dt~e~L~~al~~~~~eispS~~YA~AAi~eg~~fINgsPq~t~vP~ 290 (510)
+.+++..+++||. ++.+..... .+.+.+.+.|+ .|-..||++|.+.|..-.+..
T Consensus 64 ~~~~~~l~~~gl~-i~~~~~~~~-----------~~~~~~~~~i~--------------~A~~lGa~~v~~~p~~~~l~~ 117 (257)
T 3lmz_A 64 RAFHDKCAAHKVT-GYAVGPIYM-----------KSEEEIDRAFD--------------YAKRVGVKLIVGVPNYELLPY 117 (257)
T ss_dssp HHHHHHHHHTTCE-EEEEEEEEE-----------CSHHHHHHHHH--------------HHHHHTCSEEEEEECGGGHHH
T ss_pred HHHHHHHHHcCCe-EEEEecccc-----------CCHHHHHHHHH--------------HHHHhCCCEEEecCCHHHHHH
Confidence 4456666789994 445543211 23344444332 344679999998775323344
Q ss_pred hHHHHHHhCCcc
Q 010460 291 LIDLAIRRNCLI 302 (510)
Q Consensus 291 l~elAe~~gvpi 302 (510)
+.++|++.|+.+
T Consensus 118 l~~~a~~~gv~l 129 (257)
T 3lmz_A 118 VDKKVKEYDFHY 129 (257)
T ss_dssp HHHHHHHHTCEE
T ss_pred HHHHHHHcCCEE
Confidence 555555555543
No 25
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=28.96 E-value=53 Score=33.55 Aligned_cols=65 Identities=17% Similarity=0.101 Sum_probs=43.5
Q ss_pred HHHHHHhcCCceeeCC-CCCCC--ccchHHHHHHhCCccccCCCCCCccchhhhHHHHHHhcCCceeE
Q 010460 267 YAIACVLENIPFINGS-PQNTF--VPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTS 331 (510)
Q Consensus 267 YA~AAi~eg~~fINgs-Pq~t~--vP~l~elAe~~gvpi~GdD~KSGqT~lksvLa~~L~~rGlkv~s 331 (510)
++.+|-+.|+.++..- |...+ ..+.++--.-+.+++.|.|--.|.|..-..|...|+.+|+++.-
T Consensus 136 l~~~A~~~Gv~i~dvr~~p~~l~v~~g~i~~i~~~ri~v~GTDt~vGKt~t~~~L~~~l~~~G~~v~~ 203 (350)
T 2g0t_A 136 FLKIAHENGTRIIDIRIPPLELDVLRGGIYRKKIKVVGVFGTDCVVGKRTTAVQLWERALEKGIKAGF 203 (350)
T ss_dssp HHHHHHHHTCCEEESSSCCSSCCCCCSGGGGCCSEEEEEEESSSSSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHCCCEEEEeCcCCCcccccccceeeecceEEEEecCCCCccCccHHHHHHHHHHhcCCeEEE
Confidence 4556666677776542 22121 12222222234688999999779999999999999999998744
No 26
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=27.80 E-value=18 Score=34.81 Aligned_cols=30 Identities=27% Similarity=0.306 Sum_probs=25.7
Q ss_pred HHHHHhcCCceeeCCCCCCCccchHHHHHHhCC
Q 010460 268 AIACVLENIPFINGSPQNTFVPGLIDLAIRRNC 300 (510)
Q Consensus 268 A~AAi~eg~~fINgsPq~t~vP~l~elAe~~gv 300 (510)
|.+|+++|+.|| .||. +.|.+++.|.++|+
T Consensus 78 a~~ai~AGA~fi-vsP~--~~~evi~~~~~~~v 107 (217)
T 3lab_A 78 FQKAIDAGAQFI-VSPG--LTPELIEKAKQVKL 107 (217)
T ss_dssp HHHHHHHTCSEE-EESS--CCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEE-EeCC--CcHHHHHHHHHcCC
Confidence 557788899999 7784 68999999999998
No 27
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=26.46 E-value=50 Score=32.79 Aligned_cols=65 Identities=17% Similarity=0.132 Sum_probs=42.1
Q ss_pred HHHHHhcCCceeeCCCCCCCccchHHHHHHhCCccccCC-CCCCccchhhhHHHHHHhcCCceeEEEEee
Q 010460 268 AIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDD-FKSGQTKMKSVLVDFLVGAGIKPTSIVSYN 336 (510)
Q Consensus 268 A~AAi~eg~~fINgsPq~t~vP~l~elAe~~gvpi~GdD-~KSGqT~lksvLa~~L~~rGlkv~s~~s~N 336 (510)
|.||+++|+.|+.-|=.....-.+.+.|+++|+.+.-+= +--| +-..++-.+.++ ++..+...+.
T Consensus 94 ~~~~~~~g~~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~G~~PG---~~~~~a~~~~~~-~~~~~~~~~~ 159 (365)
T 3abi_A 94 IKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAGFAPG---LSNILMGRIFQE-LDLKEGYIYV 159 (365)
T ss_dssp HHHHHHHTCEEEECCCCSSCGGGGHHHHHHTTCEEECCCBTTTB---HHHHHHHHHHHH-SCEEEEEEEE
T ss_pred HHHHHhcCcceEeeeccchhhhhhhhhhccCCceeeecCCCCCc---hHHHHHHHHHHh-ccccceeEEe
Confidence 678999999999876322234578899999998765432 2225 344566666655 4666655544
No 28
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=25.49 E-value=1.1e+02 Score=27.97 Aligned_cols=33 Identities=18% Similarity=0.084 Sum_probs=19.4
Q ss_pred HHHhcCCceeeCCCCCCCccchHHHHHHhCCcc
Q 010460 270 ACVLENIPFINGSPQNTFVPGLIDLAIRRNCLI 302 (510)
Q Consensus 270 AAi~eg~~fINgsPq~t~vP~l~elAe~~gvpi 302 (510)
.|-.-||++|...|..-....+.++|++.|+.+
T Consensus 99 ~A~~lGa~~v~~~~~~~~~~~l~~~a~~~gv~l 131 (262)
T 3p6l_A 99 FAKAMDLEFITCEPALSDWDLVEKLSKQYNIKI 131 (262)
T ss_dssp HHHHTTCSEEEECCCGGGHHHHHHHHHHHTCEE
T ss_pred HHHHcCCCEEEecCCHHHHHHHHHHHHHhCCEE
Confidence 344679999999874322344445555555543
No 29
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=24.95 E-value=2.1e+02 Score=28.77 Aligned_cols=69 Identities=14% Similarity=0.082 Sum_probs=44.9
Q ss_pred HHHHHhcCCceeeCCCCCCCccchHHHHHHhCCccc-cCCCCCCccchhhhHHHHHHhcCCceeEEEEeeecCCc
Q 010460 268 AIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIG-GDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNN 341 (510)
Q Consensus 268 A~AAi~eg~~fINgsPq~t~vP~l~elAe~~gvpi~-GdD~KSGqT~lksvLa~~L~~rGlkv~s~~s~N~LGN~ 341 (510)
+.||+.+|+.|+..+=...-.-.+.+.|+++|+.+. |--|--| +-..++..+.++ +.+.++- ++.+|..
T Consensus 94 ~~a~l~~G~~~vD~s~~~~~~~~l~~~Ak~aG~~~l~g~G~dPG---~~~~~a~~~~~~-~~v~~i~-~~~Gglp 163 (365)
T 2z2v_A 94 IKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAGFAPG---LSNILMGRIFQE-LDLKEGY-IYVGGLP 163 (365)
T ss_dssp HHHHHHTTCCEEECCCCSSCGGGGHHHHHHTTCEEECSCBTTTB---HHHHHHHHHHHH-SCEEEEE-EEEEEEE
T ss_pred HHHHHHhCCeEEEccCCcHHHHHHHHHHHHcCCEEEECCCCcch---HHHHHHHHHHHh-cCCCEEE-EEeccCC
Confidence 468999999999976321123478999999999854 3333334 455666666666 6655544 4666653
No 30
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=24.67 E-value=54 Score=32.17 Aligned_cols=66 Identities=18% Similarity=0.146 Sum_probs=43.8
Q ss_pred HHHHHhc--CCceeeCCCCCC-CccchHHHHHHhCCccccCCCC-CCc--c-----chhhhHHHHHHhcCCceeEEE
Q 010460 268 AIACVLE--NIPFINGSPQNT-FVPGLIDLAIRRNCLIGGDDFK-SGQ--T-----KMKSVLVDFLVGAGIKPTSIV 333 (510)
Q Consensus 268 A~AAi~e--g~~fINgsPq~t-~vP~l~elAe~~gvpi~GdD~K-SGq--T-----~lksvLa~~L~~rGlkv~s~~ 333 (510)
+.||+++ |++.||...-.. ..|.+.+++.+.|+++..--+. .|+ | .+=.-+.+.+...|++...|+
T Consensus 91 ~~aal~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~Ii 167 (271)
T 2yci_X 91 IEAGLKVHRGHAMINSTSADQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTELY 167 (271)
T ss_dssp HHHHHHHCCSCCEEEEECSCHHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHhCCCCCEEEECCCCccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEE
Confidence 5677777 999999655322 1389999999999998774441 132 2 112235667778999875554
No 31
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=23.04 E-value=50 Score=29.77 Aligned_cols=54 Identities=11% Similarity=0.062 Sum_probs=38.2
Q ss_pred HHHHHhcCCceeeCCCCCCCccchHHHHHHhCCccccCCCCCCccchhhhHHHHHHhcCCceeE
Q 010460 268 AIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTS 331 (510)
Q Consensus 268 A~AAi~eg~~fINgsPq~t~vP~l~elAe~~gvpi~GdD~KSGqT~lksvLa~~L~~rGlkv~s 331 (510)
+..|+.+|+.|| .+|. |.+.+++.+++.|+|+.- +..|++. +......|.....
T Consensus 76 ~~~a~~~Gad~i-v~~~--~~~~~~~~~~~~g~~vi~-g~~t~~e------~~~a~~~Gad~vk 129 (205)
T 1wa3_A 76 CRKAVESGAEFI-VSPH--LDEEISQFCKEKGVFYMP-GVMTPTE------LVKAMKLGHTILK 129 (205)
T ss_dssp HHHHHHHTCSEE-ECSS--CCHHHHHHHHHHTCEEEC-EECSHHH------HHHHHHTTCCEEE
T ss_pred HHHHHHcCCCEE-EcCC--CCHHHHHHHHHcCCcEEC-CcCCHHH------HHHHHHcCCCEEE
Confidence 677888999999 8884 568899999999999886 3333322 2233566776554
No 32
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=22.78 E-value=1.4e+02 Score=29.58 Aligned_cols=127 Identities=13% Similarity=0.102 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCC-eEEEEEccCCCcccc-cc----------cc---ccc---cHHHHHhhcccC-CCccCh
Q 010460 203 KEQMLQIIKDIREFKEKNKVD-RVVVLWTANTERYSN-VI----------VG---LND---TVENLLASLDKN-EAEISP 263 (510)
Q Consensus 203 ~e~~e~ir~DIr~Fk~~~~ld-~vVVlwtAsTEr~~~-~~----------~~---~~d---t~e~L~~al~~~-~~eisp 263 (510)
+.++++|++. +++ ++.|.+ +++-+...+.|+..+ +. .+ +.+ +.+.++ ..+.+ --+.+|
T Consensus 19 ~~~~~~l~~~-~~~-~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll-~~~iDvVv~~t~ 95 (331)
T 3c8m_A 19 LNLLRIIRSF-NEE-NRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEAL-ARDFDIVVDATP 95 (331)
T ss_dssp HHHHHHHHHH-HHH-CSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHH-HSSCSEEEECSC
T ss_pred HHHHHHHHhC-hHH-HhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHh-CCCCCEEEECCC
Confidence 3466666542 333 445544 566666666665543 10 11 223 566665 32111 112333
Q ss_pred h-------HHHHHHHHhcCCceeeC--CCCCCCccchHHHHHHhCCccccCCCCCCccchhhhHHHHHHhcCCceeEEEE
Q 010460 264 S-------TLYAIACVLENIPFING--SPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVS 334 (510)
Q Consensus 264 S-------~~YA~AAi~eg~~fINg--sPq~t~vP~l~elAe~~gvpi~GdD~KSGqT~lksvLa~~L~~rGlkv~s~~s 334 (510)
+ .-|+.+|+++|.+-|-. -|-....+.+.++|+++|+.+.=.-.-.|...+-..|-+++. |=++.++..
T Consensus 96 ~~~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~~~~ea~vg~giPii~~l~~~l~--g~~I~~I~G 173 (331)
T 3c8m_A 96 ASADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIRYEATVAGGVPLFSFIDYSVL--PSRIKKFRG 173 (331)
T ss_dssp CCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCCHHHHHHHST--TCCCCEEEE
T ss_pred CCCccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCEEEEEeecccccHHHHHHHHHhh--cCcccEEEE
Confidence 3 34788999999999964 342112478899999999876444334466777788888773 567777655
No 33
>2k0d_X IMME7, colicin-E7 immunity protein; toxin inhibitor; NMR {Escherichia coli}
Probab=21.87 E-value=33 Score=29.64 Aligned_cols=56 Identities=25% Similarity=0.327 Sum_probs=41.8
Q ss_pred CCHhHHHHHHHhhhhcCCCCC----CCCh-hhhhhhccccCCCCccCCHHHHHHHHHHHHHHHHHhcCCC
Q 010460 159 FDIDLQKQLRPYMESMVPLPG----IYDP-DFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVD 223 (510)
Q Consensus 159 l~~~l~~~l~~~l~~~~p~p~----v~~~-~fia~nq~~ra~nv~~g~k~e~~e~ir~DIr~Fk~~~~ld 223 (510)
.+.+.++.|-.+...+.+-|. |||| .+-|+|...|-+. -|.|.+-|.++|++||+-
T Consensus 36 ~e~e~~d~Ll~hF~~iteHP~GSDLIfYP~~~~~~~~~~~e~s---------PEgIvk~IKeWRa~nGkP 96 (101)
T 2k0d_X 36 ATDDVLDVLLEHFVKITEHPDGTALIYEAAARAAANPGGDGGG---------PEGIVKEIKEWRAANGKP 96 (101)
T ss_dssp TCSHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHCSSSTTSS---------GGGHHHHHHHHHHHHTCC
T ss_pred cchHHHHHHHHHHHHcCCCCCCCceeeecccccccCCCCCCCC---------HHHHHHHHHHHHHHcCCc
Confidence 455557888899999999997 7888 6777777765542 234667778899999873
No 34
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=21.83 E-value=80 Score=32.09 Aligned_cols=49 Identities=14% Similarity=0.013 Sum_probs=27.7
Q ss_pred hHHHHHHHHhcCCceeeCC-----------------CCCCCccchHHHHHHhCCccccCC-CCCCcc
Q 010460 264 STLYAIACVLENIPFINGS-----------------PQNTFVPGLIDLAIRRNCLIGGDD-FKSGQT 312 (510)
Q Consensus 264 S~~YA~AAi~eg~~fINgs-----------------Pq~t~vP~l~elAe~~gvpi~GdD-~KSGqT 312 (510)
+.--|.+++++|+.+|-.. |+.+.++.+.+.+++.++||..+= +++++.
T Consensus 155 t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~d 221 (361)
T 3khj_A 155 TEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGD 221 (361)
T ss_dssp SHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHH
T ss_pred CHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHH
Confidence 3345778888999998642 222222333344555688877653 344433
No 35
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=20.76 E-value=42 Score=31.50 Aligned_cols=41 Identities=20% Similarity=0.259 Sum_probs=35.0
Q ss_pred hCCccccCCCCCCccchhhhHHHHHHhcCCceeEEEEeeec
Q 010460 298 RNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHL 338 (510)
Q Consensus 298 ~gvpi~GdD~KSGqT~lksvLa~~L~~rGlkv~s~~s~N~L 338 (510)
++++|.|-|--+|.|.+-..|+..|..+|.+|.-+=-.+.+
T Consensus 5 k~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~KPv~~g 45 (228)
T 3of5_A 5 KKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLKPVASG 45 (228)
T ss_dssp EEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEECSEEES
T ss_pred cEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEecceeec
Confidence 45789999999999999999999999999999776544444
No 36
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=20.34 E-value=59 Score=31.30 Aligned_cols=42 Identities=17% Similarity=0.093 Sum_probs=36.0
Q ss_pred hCCccccCCCCCCccchhhhHHHHHHhcCCceeEEEEeeecC
Q 010460 298 RNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLG 339 (510)
Q Consensus 298 ~gvpi~GdD~KSGqT~lksvLa~~L~~rGlkv~s~~s~N~LG 339 (510)
+.++|.|-|--+|.|.+-..|+..|..+|++|.-+=-.+.+-
T Consensus 27 ~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~ 68 (251)
T 3fgn_A 27 TILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGT 68 (251)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCG
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCC
Confidence 457899999999999999999999999999998776555543
Done!