Your job contains 1 sequence.
>010461
MISNVASHQSPASVPERESCAEHRNHVAWTSVKQERWEGELVVEGEIPSWLNGTYLRNGP
GVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEAYKAAKKNKKLCYREFSVS
PKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLTETQKGSVIVDPDTLDTLG
KFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPGYLVVRMEPGTNERKVIGRVNCRGGP
APGWVHSFTMTEHYVVVPEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKI
AASVEVPLYMVFHFINAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDV
LPDARVGRFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPC
NFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKNGGAYVVL
LDGSTFEEIARARFPFGLPYGFHGCWVPEN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010461
(510 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2134093 - symbol:CCD8 "carotenoid cleavage dio... 1850 6.7e-191 1
FB|FBgn0002937 - symbol:ninaB "neither inactivation nor a... 369 4.7e-49 2
ZFIN|ZDB-GENE-060421-7448 - symbol:bco2b "beta-carotene o... 306 4.2e-45 2
UNIPROTKB|Q8HXG8 - symbol:BCO2 "Beta,beta-carotene 9',10'... 294 1.2e-44 2
ZFIN|ZDB-GENE-010509-1 - symbol:bco2l "beta-carotene 15, ... 300 4.5e-44 2
MGI|MGI:2177469 - symbol:Bco2 "beta-carotene oxygenase 2"... 288 7.5e-44 2
UNIPROTKB|E1C8E0 - symbol:BCO2 "Uncharacterized protein" ... 289 1.2e-43 2
UNIPROTKB|Q9YGX2 - symbol:RPE65 "Retinoid isomerohydrolas... 327 3.5e-43 2
UNIPROTKB|Q9BYV7 - symbol:BCO2 "Beta,beta-carotene 9',10'... 282 4.3e-43 2
UNIPROTKB|F1S830 - symbol:RPE65 "Uncharacterized protein"... 318 8.1e-43 2
ZFIN|ZDB-GENE-081104-505 - symbol:rpe65c "retinal pigment... 339 9.3e-43 2
UNIPROTKB|E2RS36 - symbol:BCO2 "Uncharacterized protein" ... 275 1.1e-42 2
UNIPROTKB|Q16518 - symbol:RPE65 "Retinoid isomerohydrolas... 316 1.5e-42 2
UNIPROTKB|F1SM94 - symbol:BCO2 "Uncharacterized protein" ... 280 1.5e-42 2
ZFIN|ZDB-GENE-050410-16 - symbol:rpe65b "retinal pigment ... 337 1.8e-42 2
UNIPROTKB|F1PXT9 - symbol:RPE65 "Retinoid isomerohydrolas... 314 5.7e-42 2
UNIPROTKB|Q28175 - symbol:RPE65 "Retinoid isomerohydrolas... 313 7.6e-42 2
RGD|621396 - symbol:Rpe65 "retinal pigment epithelium 65"... 315 8.9e-42 2
UNIPROTKB|Q9TVB8 - symbol:RPE65 "Retinoid isomerohydrolas... 314 1.2e-41 2
UNIPROTKB|Q83CU2 - symbol:CBU_1011 "Lignostilbene-alpha,b... 441 1.4e-41 1
TIGR_CMR|CBU_1011 - symbol:CBU_1011 "dioxygenase, putativ... 441 1.4e-41 1
MGI|MGI:98001 - symbol:Rpe65 "retinal pigment epithelium ... 312 2.2e-41 2
ZFIN|ZDB-GENE-040426-1717 - symbol:rpe65a "retinal pigmen... 307 1.8e-38 2
MGI|MGI:1926923 - symbol:Bcmo1 "beta-carotene 15,15'-mono... 237 1.1e-36 2
RGD|70981 - symbol:Bcmo1 "beta-carotene 15,15'-monooxygen... 234 1.9e-36 2
UNIPROTKB|Q91XT5 - symbol:Bcmo1 "Beta,beta-carotene 15,15... 234 1.9e-36 2
UNIPROTKB|F1N2Z9 - symbol:BCO2 "Uncharacterized protein" ... 284 1.1e-35 2
ZFIN|ZDB-GENE-040426-1191 - symbol:bcmo1b "beta-carotene ... 235 3.4e-34 2
UNIPROTKB|Q9HAY6 - symbol:BCMO1 "Beta,beta-carotene 15,15... 224 7.0e-34 2
WB|WBGene00018755 - symbol:bcmo-2 species:6239 "Caenorhab... 301 1.6e-33 2
UNIPROTKB|E9PJJ1 - symbol:BCO2 "Beta,beta-carotene 9',10'... 244 4.3e-33 2
WB|WBGene00012914 - symbol:bcmo-1 species:6239 "Caenorhab... 281 1.5e-31 2
UNIPROTKB|F1P321 - symbol:RPE65 "Retinoid isomerohydrolas... 204 1.3e-28 2
UNIPROTKB|F1NE28 - symbol:RPE65 "Retinoid isomerohydrolas... 204 1.4e-28 2
UNIPROTKB|F1N3B7 - symbol:BCMO1 "Uncharacterized protein"... 198 4.6e-26 2
ASPGD|ASPL0000049803 - symbol:AN1704 species:162425 "Emer... 208 3.9e-25 3
RGD|1309022 - symbol:Bco2 "beta-carotene oxygenase 2" spe... 169 6.2e-24 3
RGD|1597300 - symbol:Tex12 "testis expressed 12" species:... 169 6.2e-24 3
TAIR|locus:2093751 - symbol:NCED6 "nine-cis-epoxycaroteno... 210 1.7e-23 2
TAIR|locus:2091652 - symbol:NCED3 "nine-cis-epoxycaroteno... 186 1.1e-21 2
TAIR|locus:2202492 - symbol:NCED5 "nine-cis-epoxycaroteno... 177 6.9e-21 2
TAIR|locus:2134796 - symbol:NCED4 "nine-cis-epoxycaroteno... 271 1.4e-20 1
ZFIN|ZDB-GENE-010508-1 - symbol:bcmo1a "beta-carotene 15,... 267 2.6e-20 1
TAIR|locus:2087418 - symbol:CCD1 "carotenoid cleavage dio... 265 4.9e-20 1
TAIR|locus:2032085 - symbol:NCED9 "nine-cis-epoxycaroteno... 183 4.5e-18 2
UNIPROTKB|Q9I993 - symbol:BCMO1 "Beta,beta-carotene 15,15... 247 5.0e-18 1
UNIPROTKB|I3LRK8 - symbol:BCMO1 "Uncharacterized protein"... 214 1.0e-16 1
UNIPROTKB|G4MX63 - symbol:MGG_08016 "Retinal pigment epit... 200 1.0e-14 2
UNIPROTKB|O06785 - symbol:MT0683 "Carotenoid cleavage oxy... 131 1.2e-13 3
UNIPROTKB|Q53353 - symbol:Q53353 "Lignostilbene-alpha,bet... 124 1.2e-12 2
UNIPROTKB|Q7XU29 - symbol:OSJNBb0034G17.9 "OSJNBb0034G17.... 136 1.2e-12 2
UNIPROTKB|Q52008 - symbol:lsdB "Lignostilbene-alpha,beta-... 181 9.4e-11 1
UNIPROTKB|Q746V1 - symbol:GSU3417 "Dioxygenase, putative"... 174 6.0e-10 1
TIGR_CMR|GSU_3417 - symbol:GSU_3417 "dioxygenase, putativ... 174 6.0e-10 1
TAIR|locus:2124489 - symbol:NCED2 "nine-cis-epoxycaroteno... 158 4.3e-08 1
ASPGD|ASPL0000046682 - symbol:AN1643 species:162425 "Emer... 153 6.2e-08 2
ASPGD|ASPL0000067272 - symbol:AN7062 species:162425 "Emer... 96 1.2e-05 2
>TAIR|locus:2134093 [details] [associations]
symbol:CCD8 "carotenoid cleavage dioxygenase 8"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;RCA;NAS] [GO:0009733 "response to auxin stimulus"
evidence=IMP] [GO:0010223 "secondary shoot formation"
evidence=IGI;IMP] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISS] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009850 "auxin metabolic process"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0016121 "carotene catabolic process" evidence=IDA] [GO:0016124
"xanthophyll catabolic process" evidence=IDA] [GO:0009926 "auxin
polar transport" evidence=IMP] [GO:0009830 "cell wall modification
involved in abscission" evidence=RCA] GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009926 GO:GO:0046872
GO:GO:0016702 GO:GO:0009965 EMBL:AL161582 eggNOG:COG3670
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
GO:GO:0016121 GO:GO:0010223 GO:GO:0016124 EMBL:AY074264
EMBL:AY133732 IPI:IPI00536697 PIR:T10688 RefSeq:NP_195007.2
UniGene:At.31633 ProteinModelPortal:Q8VY26 SMR:Q8VY26 STRING:Q8VY26
PRIDE:Q8VY26 EnsemblPlants:AT4G32810.1 GeneID:829417
KEGG:ath:AT4G32810 TAIR:At4g32810 HOGENOM:HOG000237971
InParanoid:Q8VY26 PhylomeDB:Q8VY26 ProtClustDB:CLSN2680232
BioCyc:ARA:AT4G32810-MONOMER BioCyc:MetaCyc:AT4G32810-MONOMER
Genevestigator:Q8VY26 Uniprot:Q8VY26
Length = 570
Score = 1850 (656.3 bits), Expect = 6.7e-191, P = 6.7e-191
Identities = 329/514 (64%), Positives = 422/514 (82%)
Query: 5 VASHQSPASVPERESC-AEHRNHVAWTSVKQERWEGELVVEGEIPSWLNGTYLRNGPGVW 63
V + +P+ +PE+E E R HVAWTSV+QE WEGEL V+G+IP+WLNGTYLRNGPG+W
Sbjct: 58 VINSAAPSPLPEKEKVEGERRCHVAWTSVQQENWEGELTVQGKIPTWLNGTYLRNGPGLW 117
Query: 64 HIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEAYKAAKKNKKLCYREFSVSPKP 123
+IG+ +F HLFDGY+ LVK+ F+ GR+ A HR +E++AYKAAKK+ +LCYREFS +PK
Sbjct: 118 NIGDHDFRHLFDGYSTLVKLQFD-GGRIFAAHRLLESDAYKAAKKHNRLCYREFSETPKS 176
Query: 124 ----DNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLTETQKGSVIVDPDTLDTL 179
N + +GE+ +LFSG SLTDNAN G+ KLGDGR++CLTETQKGS++VD +TL+T+
Sbjct: 177 VIINKNPFSGIGEIVRLFSGESLTDNANTGVIKLGDGRVMCLTETQKGSILVDHETLETI 236
Query: 180 GKFEYSDPLGG-FIQSSHPIVTDDEFLTLLPDLLNPGYLVVRMEPGTNERKVIGRVNCRG 238
GKFEY D L IQS+HPIVT+ E TL+PDL+ PGY VVRME G+N+R+V+GRV CR
Sbjct: 237 GKFEYDDVLSDHMIQSAHPIVTETEMWTLIPDLVKPGYRVVRMEAGSNKREVVGRVRCRS 296
Query: 239 GP-APGWVHSFTMTEHYVVVPEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKAS 297
G PGWVHSF +TE+YVV+PEMPL+YSV++LL+AEP+ LY+FEW P+ AF+HV+ K +
Sbjct: 297 GSWGPGWVHSFAVTENYVVIPEMPLRYSVKNLLRAEPTPLYKFEWCPQDGAFIHVMSKLT 356
Query: 298 GKIAASVEVPLYMVFHFINAYEE-KDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFH 356
G++ ASVEVP Y+ FHFINAYEE K+ DG+ +IADCCEHNADT I++ L L LRS H
Sbjct: 357 GEVVASVEVPAYVTFHFINAYEEDKNGDGKATVIIADCCEHNADTRILDMLRLDTLRSSH 416
Query: 357 GQDVLPDARVGRFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGA 416
G DVLPDAR+GRF IP DGS++GKLET ++ E+HGR +DMCSINP YLG+KYRY YA GA
Sbjct: 417 GHDVLPDARIGRFRIPLDGSKYGKLETAVEAEKHGRAMDMCSINPLYLGQKYRYVYACGA 476
Query: 417 KRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKNGGA 476
+RPCNFPN+L+K+D+V++K KNW E G++PSEP FV RPGAT EDDGVVIS++SE+NGG+
Sbjct: 477 QRPCNFPNALSKVDIVEKKVKNWHEHGMIPSEPFFVPRPGATHEDDGVVISIVSEENGGS 536
Query: 477 YVVLLDGSTFEEIARARFPFGLPYGFHGCWVPEN 510
+ +LLDGS+FEEIARA+FP+GLPYG HGCW+P++
Sbjct: 537 FAILLDGSSFEEIARAKFPYGLPYGLHGCWIPKD 570
>FB|FBgn0002937 [details] [associations]
symbol:ninaB "neither inactivation nor afterpotential B"
species:7227 "Drosophila melanogaster" [GO:0007604
"phototransduction, UV" evidence=IMP] [GO:0016063 "rhodopsin
biosynthetic process" evidence=IDA;IMP] [GO:0007603
"phototransduction, visible light" evidence=IMP] [GO:0007602
"phototransduction" evidence=TAS] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=IMP;IDA;NAS] [GO:0016119
"carotene metabolic process" evidence=IDA] [GO:0035238 "vitamin A
biosynthetic process" evidence=IMP;IDA] [GO:0009110 "vitamin
biosynthetic process" evidence=IMP] [GO:0010436 "carotenoid
dioxygenase activity" evidence=IDA] [GO:0042574 "retinal metabolic
process" evidence=IDA] [GO:0004744 "retinal isomerase activity"
evidence=IDA] GO:GO:0042574 GO:GO:0007602 eggNOG:COG3670
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
GO:GO:0035238 GO:GO:0016119 GO:GO:0010436 GO:GO:0016063
GO:GO:0004744 EMBL:AB041507 ProteinModelPortal:Q9NKW9 SMR:Q9NKW9
STRING:Q9NKW9 PRIDE:Q9NKW9 FlyBase:FBgn0002937 InParanoid:Q9NKW9
OrthoDB:EOG4TTF03 ArrayExpress:Q9NKW9 Bgee:Q9NKW9 Uniprot:Q9NKW9
Length = 620
Score = 369 (135.0 bits), Expect = 4.7e-49, Sum P(2) = 4.7e-49
Identities = 100/338 (29%), Positives = 161/338 (47%)
Query: 45 GEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEAYK 104
G IP W+ G+ LRNGPG W +G+ FGHLFD A+L + +NGR+ +R ++TE +
Sbjct: 63 GHIPKWICGSLLRNGPGSWKVGDMTFGHLFDCSALLHRFAI-RNGRVTYQNRFVDTETLR 121
Query: 105 AAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLTET 164
+ +++ EF + PD + A +F S TDN+ IY GD + TET
Sbjct: 122 KNRSAQRIVVTEFGTAAVPDPCHSIFDRFAAIFRPDSGTDNSMISIYPFGD-QYYTFTET 180
Query: 165 QKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLN---PGYLVVRM 221
I +P TL T + +D +G +SHP V + L + P Y ++
Sbjct: 181 PFMHRI-NPCTLATEARICTTDFVGVVNHTSHPHVLPSGTVYNLGTTMTRSGPAYTILCF 239
Query: 222 EPGTN---ERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLKAE---PS 275
G + V+ + CR PG++H+F +T+HY V+ E PL S+ +KA+ +
Sbjct: 240 PHGEQMFEDAHVVATLPCRWKLHPGYMHTFGLTDHYFVIVEQPLSVSLTEYIKAQLGGQN 299
Query: 276 ALYQFEWRPERKAFLHVVCKASGKIAASVEVPLYMVFHFINAYEEKDKDGRVIAVIADCC 335
+W +R H++ + SGK+ + E + H IN +E +DG V+ I C
Sbjct: 300 LSACLKWFEDRPTLFHLIDRVSGKLVQTYESEAFFYLHIINCFE---RDGHVVVDI--CS 354
Query: 336 EHNADTTIIETL-SLKNLRSFHGQDVLPDARVGRFTIP 372
N + L ++ N+++ L R RF +P
Sbjct: 355 YRNPEMINCMYLEAIANMQTNPNYATLFRGRPLRFVLP 392
Score = 188 (71.2 bits), Expect = 4.7e-49, Sum P(2) = 4.7e-49
Identities = 42/111 (37%), Positives = 58/111 (52%)
Query: 403 YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDD 462
Y+GK YRY YAI + P +L K+D+ + WCEE + PSEP+FV P EDD
Sbjct: 507 YMGKNYRYFYAISSDVDAVNPGTLIKVDVWNKSCLTWCEENVYPSEPIFVPSPDPKSEDD 566
Query: 463 GVVI-SMISEKNGGAYV--VLLDGSTFEEIARARFPFG--LPYGFHGCWVP 508
GV++ SM+ YV ++L T E+ R F +P HG + P
Sbjct: 567 GVILASMVLGGLNDRYVGLIVLCAKTMTELGRCDFHTNGPVPKCLHGWFAP 617
>ZFIN|ZDB-GENE-060421-7448 [details] [associations]
symbol:bco2b "beta-carotene oxygenase 2b"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-060421-7448 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 KO:K10252 OrthoDB:EOG45B1FD EMBL:BX572648
EMBL:BC115259 IPI:IPI00758725 RefSeq:NP_001035402.1
UniGene:Dr.82050 Ensembl:ENSDART00000061139 GeneID:678554
KEGG:dre:678554 CTD:678554 InParanoid:Q1RLW1 OMA:LWHIGDY
NextBio:20902398 Uniprot:Q1RLW1
Length = 555
Score = 306 (112.8 bits), Expect = 4.2e-45, Sum P(2) = 4.2e-45
Identities = 96/328 (29%), Positives = 155/328 (47%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
+ G +PSW+ G +LRNGPG + IG +F H FDG A+L + H E +G++ R + +++
Sbjct: 53 ITGNVPSWIKGNFLRNGPGKFEIGRSSFNHWFDGMALLHQFHIE-DGKVTYMSRFLNSDS 111
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGI--YKLGDGRIIC 160
YK ++ ++ EF PD + F L+DNAN YK GD +
Sbjct: 112 YKENLEHNRIIVSEFGTVAMPDPCKNFFQRFLSRFELPKLSDNANVSFVQYK-GDYYVS- 169
Query: 161 LTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLN-PG--YL 217
TET I DP+TL+T K ++S + ++HP V D + + G Y
Sbjct: 170 -TETNFMHKI-DPETLETKEKVDWSKFIAVNGATAHPHVDSDGTTYNMGNSYTVKGAFYN 227
Query: 218 VVRMEPGT---NER----KVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLL 270
++ + P N+ V+ + P + HSF M+E+YVV E P++ + ++
Sbjct: 228 IIMVPPNKENPNDTLEGASVVCSIPSEDKSKPSYYHSFAMSENYVVFIEQPIKMDLLKIV 287
Query: 271 --KAEPSALYQ-FEWRPERKAFLHVVCKASGKIAAS--VEVPLYMVFHFINAYEEKDKDG 325
K + + W P+R HV+ K +GK++ PL FH IN YE+ +G
Sbjct: 288 TGKLRGKGINEGVYWDPKRNTVFHVINKRTGKLSLVKYYTKPL-STFHQINCYED---NG 343
Query: 326 RVIAVIADCCEHNADTTIIETLSLKNLR 353
+I D C + D I ++NL+
Sbjct: 344 ---FLIMDMCSSD-DGQAINNYVIQNLK 367
Score = 234 (87.4 bits), Expect = 4.2e-45, Sum P(2) = 4.2e-45
Identities = 50/122 (40%), Positives = 73/122 (59%)
Query: 386 DPEEHGRGVDMCSINPAYLGKK-YRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGI 444
D E+G G++ IN + YRY Y G + +SL K+DL ++ K W G+
Sbjct: 433 DLHEYG-GLEFPHINYSMCNSHPYRYFYGCGFRHLVG--DSLIKMDLQGKQIKVWKHAGM 489
Query: 445 VPSEPLFVARPGATDEDDGVVISMISEKNG--GAYVVLLDGSTFEEIARARFPFGLPYGF 502
PSEP+FV+ PGA +EDDGV++S++ N ++++LD TFEE+ RA P +PYGF
Sbjct: 490 FPSEPVFVSSPGAVEEDDGVILSVVITPNQDKSTFLLVLDAKTFEELGRAEVPKNIPYGF 549
Query: 503 HG 504
HG
Sbjct: 550 HG 551
>UNIPROTKB|Q8HXG8 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9541 "Macaca fascicularis" [GO:0016119 "carotene metabolic
process" evidence=ISS] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISS] GO:GO:0005739
GO:GO:0046872 GO:GO:0016702 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:AB097557
ProteinModelPortal:Q8HXG8 GO:GO:0016119 Uniprot:Q8HXG8
Length = 556
Score = 294 (108.6 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 99/331 (29%), Positives = 153/331 (46%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G P WLNG+ LR GPG + G+ + H FDG A+L + K G + + ++++
Sbjct: 49 VWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAK-GTVTYRSKFLQSDT 107
Query: 103 YKAAKKNKKLCYREFSVSPKPD---N-FLAYVGELAKLFSGASLTDNAN-NGIYKLGDGR 157
YKA ++ EF PD N F ++ A++TDN N N + GD
Sbjct: 108 YKANSAKNRIVMSEFGTLATPDPCKNVFERFMSRFELPGKAAAMTDNTNVNYVRYKGD-Y 166
Query: 158 IICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP--- 214
+C TET + VD +TL+ K ++S + ++HP D + + P
Sbjct: 167 YLC-TETNFMNK-VDIETLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSFGPFGF 224
Query: 215 GYLVVRMEPGTN--ERKVIG-RVNCRGGPA----PGWVHSFTMTEHYVVVPEMPLQYSVQ 267
Y V+R+ P E G +V C P P + HSF MT +Y++ E PL+ ++
Sbjct: 225 SYKVIRVPPEKVDLEETTHGAQVICSIAPTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLW 284
Query: 268 SLL--KAEPSALYQ-FEWRPERKAFLHVVCKASGKIAAS--VEVPLYMVFHFINAYEEKD 322
+ K A W P+ HVV K +G++ P ++ FH INA+E++
Sbjct: 285 KIATSKIRGKAFSDGISWEPQCNTRFHVVDKHTGQLLPGRYYSKP-FVAFHHINAFEDQ- 342
Query: 323 KDGRVIAVIADCCEHNADTTIIETLSLKNLR 353
G VI + CC+ N I+E L+NLR
Sbjct: 343 --GCVIIDL--CCQDNG--RILEVYQLQNLR 367
Score = 244 (91.0 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 50/126 (39%), Positives = 76/126 (60%)
Query: 386 DPEEHGRGVDMCSINPA-YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGI 444
D E+ G G++ I + GKKYR+ Y G + +SL K+D+V + K W E+G
Sbjct: 433 DLEKEG-GIEFPQIYYGQFSGKKYRFFYGCGFRHLVG--DSLIKVDVVNKTLKVWREDGF 489
Query: 445 VPSEPLFVARPGATDEDDGVVISMI--SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGF 502
PSEP+FV PG +ED GV++S++ +N ++++LD FEE+ RA P +PYGF
Sbjct: 490 YPSEPVFVPVPGTNEEDGGVILSVVITPNQNESNFLLVLDAKNFEELGRAEVPVQMPYGF 549
Query: 503 HGCWVP 508
HG ++P
Sbjct: 550 HGTFIP 555
>ZFIN|ZDB-GENE-010509-1 [details] [associations]
symbol:bco2l "beta-carotene 15, 15-dioxygenase 2,
like" species:7955 "Danio rerio" [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
ZFIN:ZDB-GENE-010509-1 GO:GO:0016702 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AJ290391
IPI:IPI00493963 RefSeq:NP_571874.1 UniGene:Dr.79440 GeneID:84041
KEGG:dre:84041 CTD:84041 InParanoid:Q90WH3 NextBio:20934203
ArrayExpress:Q90WH3 Uniprot:Q90WH3
Length = 549
Score = 300 (110.7 bits), Expect = 4.5e-44, Sum P(2) = 4.5e-44
Identities = 96/335 (28%), Positives = 159/335 (47%)
Query: 42 VVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETE 101
+++G+IPSW+NG++LRNGPG + GE F H FDG A++ + + K+G++ R ++++
Sbjct: 44 LIKGQIPSWINGSFLRNGPGKFEFGESKFTHWFDGMALMHRFNI-KDGQVTYSSRFLQSD 102
Query: 102 AYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICL 161
+Y + ++ EF PD F TDNA K G
Sbjct: 103 SYVQNSEKNRIVVSEFGTLATPDPCKNIFARFFSRFQIPKTTDNAGVNFVKY-KGDFYVS 161
Query: 162 TETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLT--LLPDLLNPG--YL 217
TET I DP +L+T K ++S + ++HP D E T + G Y
Sbjct: 162 TETNFMRKI-DPVSLETKEKVDWSKFIAVSAATAHPHY-DREGATYNMGNSYGRKGFFYH 219
Query: 218 VVRMEPGT---NERKVIG-RVNCR---GGPA-PGWVHSFTMTEHYVVVPEMPLQYSVQS- 268
++R+ PG ++ + G + C P P + HSF M+E+Y+V E P++ +
Sbjct: 220 ILRVPPGEKQDDDADLSGAEILCSIPAADPRKPSYYHSFVMSENYIVFIEQPIKLDLLKF 279
Query: 269 -LLKAEPSALYQ-FEWRPERKAFLHVVCKASGKIAASVEVPLYM-VFHFINAYEEKDKDG 325
L + + ++ W PE HV + +G++ + M H INAYEE +G
Sbjct: 280 MLYRIAGKSFHKVMSWNPELDTIFHVADRHTGQLLNTKYYSSAMFALHQINAYEE---NG 336
Query: 326 RVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDV 360
+I + CC D +I +L+NL+S G+D+
Sbjct: 337 YLIMDM--CC--GDDGNVIGEFTLENLQST-GEDL 366
Score = 231 (86.4 bits), Expect = 4.5e-44, Sum P(2) = 4.5e-44
Identities = 53/120 (44%), Positives = 73/120 (60%)
Query: 389 EHGRGVDMCSINPA-YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPS 447
++G G++ IN A Y + YRY YA G F +SL K+DL +K K W G+ PS
Sbjct: 428 QYG-GLEFPQINYANYNARPYRYFYACGFGHV--FGDSLLKMDLEGKKLKVWRHAGLFPS 484
Query: 448 EPLFVARPGATDEDDGVVISMI---SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFHG 504
EP+F+ P A DEDDGVV+S+I EK +++++LD TF E+ RA P +PYG HG
Sbjct: 485 EPVFIPAPDAQDEDDGVVMSVIITPREKKS-SFLLVLDAKTFTELGRAEVPVDIPYGTHG 543
>MGI|MGI:2177469 [details] [associations]
symbol:Bco2 "beta-carotene oxygenase 2" species:10090 "Mus
musculus" [GO:0005622 "intracellular" evidence=IC] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0016116 "carotenoid metabolic
process" evidence=IMP] [GO:0016119 "carotene metabolic process"
evidence=ISO;IDA] [GO:0016121 "carotene catabolic process"
evidence=ISO;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISO;IDA] [GO:0042573 "retinoic
acid metabolic process" evidence=NAS] [GO:0042574 "retinal
metabolic process" evidence=NAS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051881 "regulation of mitochondrial membrane
potential" evidence=IMP] [GO:0055114 "oxidation-reduction process"
evidence=ISO;IDA] [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=IMP] MGI:MGI:2177469
GO:GO:0005739 GO:GO:0046872 GO:GO:0051881 GO:GO:0016702
GO:GO:0042573 GO:GO:0042574 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 CTD:83875 KO:K10252 OMA:VSLNAPE OrthoDB:EOG45B1FD
GO:GO:0016121 GO:GO:0016116 GO:GO:2000377 EMBL:AJ290392
IPI:IPI00118726 RefSeq:NP_573480.1 UniGene:Mm.390149
ProteinModelPortal:Q99NF1 SMR:Q99NF1 PhosphoSite:Q99NF1
PaxDb:Q99NF1 PRIDE:Q99NF1 Ensembl:ENSMUST00000119103 GeneID:170752
KEGG:mmu:170752 InParanoid:Q99NF1 NextBio:370330 Bgee:Q99NF1
Genevestigator:Q99NF1 GermOnline:ENSMUSG00000032066 Uniprot:Q99NF1
Length = 532
Score = 288 (106.4 bits), Expect = 7.5e-44, Sum P(2) = 7.5e-44
Identities = 98/355 (27%), Positives = 163/355 (45%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WLNG LR GPG + G+ + H FDG A+L + E+ G + + ++++
Sbjct: 29 VRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFRMER-GTVTYKSKFLQSDT 87
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNAN-NGIYKLGDGRIICL 161
YKA ++ EF PD + F ++TDN N N + GD
Sbjct: 88 YKANSAGGRIVISEFGTLALPDPCKSIFERFMSRFEPPTMTDNTNVNFVQYKGD--YYMS 145
Query: 162 TETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP-G--YLV 218
TET + VD + L+ K ++S + ++HP D + + P G Y +
Sbjct: 146 TETNFMNK-VDIEMLERTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSYGPRGSCYNI 204
Query: 219 VRMEPGTNE--RKVIG-RVNCRGGPA----PGWVHSFTMTEHYVVVPEMPLQYS----VQ 267
+R+ P E + G +V C P + HSF MT++Y++ E P++ +
Sbjct: 205 IRVPPKKKEPGETIHGAQVLCSIASTEKMKPSYYHSFGMTKNYIIFVEQPVKMKLWKIIT 264
Query: 268 SLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAASVEVPL-YMVFHFINAYEEKDKDGR 326
S ++ +P A W P+ HVV K +G++ + + ++ +H INA+E++ G
Sbjct: 265 SKIRGKPFA-DGISWEPQYNTRFHVVDKHTGQLLPGMYYSMPFLTYHQINAFEDQ---GC 320
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSF-HGQDVLPDARVG----RFTIPFDGS 376
+ VI CC+ D ++ L+NLR G D + + + RF +P D S
Sbjct: 321 I--VIDLCCQD--DGRSLDLYQLQNLRKAGEGLDQVYELKAKSFPRRFVLPLDVS 371
Score = 242 (90.2 bits), Expect = 7.5e-44, Sum P(2) = 7.5e-44
Identities = 51/126 (40%), Positives = 75/126 (59%)
Query: 386 DPEEHGRGVDMCSINPA-YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGI 444
D EE G G++ IN + GKKY + Y G + +SL K+D+ + + W EEG
Sbjct: 409 DLEEEG-GIEFPQINYGRFNGKKYSFFYGCGFRHLVG--DSLIKVDVTNKTLRVWREEGF 465
Query: 445 VPSEPLFVARPGATDEDDGVVISMISEKNGGA--YVVLLDGSTFEEIARARFPFGLPYGF 502
PSEP+FV PGA +ED GV++S++ N ++++LD +F E+ RA P +PYGF
Sbjct: 466 YPSEPVFVPVPGADEEDSGVILSVVITPNQSESNFLLVLDAKSFTELGRAEVPVQMPYGF 525
Query: 503 HGCWVP 508
HG +VP
Sbjct: 526 HGTFVP 531
>UNIPROTKB|E1C8E0 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016116
"carotenoid metabolic process" evidence=IEA] [GO:0016121 "carotene
catabolic process" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0051881 "regulation of mitochondrial membrane potential"
evidence=IEA] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] GO:GO:0055114
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:VSLNAPE GO:GO:0016121 EMBL:AADN02058015
IPI:IPI00602723 Ensembl:ENSGALT00000012775 Uniprot:E1C8E0
Length = 548
Score = 289 (106.8 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 89/335 (26%), Positives = 153/335 (45%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
++G IP W+NG LRNGPG + GE + H FDG A+L + +NG + + +++ +
Sbjct: 45 IKGHIPGWINGNLLRNGPGKFEFGEEKYNHWFDGMALLHQFQL-RNGTVTYQSKFLQSNS 103
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNG--IYKLGDGRIIC 160
Y ++ ++ EF PD + F +DNAN +YK GD +
Sbjct: 104 YLINNQHNRIVVSEFGTLAMPDPCKSVFARFMSRFDPPKPSDNANVSYVVYK-GDYYV-- 160
Query: 161 LTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP-G--YL 217
T VDP+TL+ K +++ + ++HP D + + G Y
Sbjct: 161 -TGENNCMYKVDPETLEMKEKVDWTKFVAVNGATAHPHYAPDGTAYNMGNSYGKFGTTYN 219
Query: 218 VVRMEP---GTNERKVIGRVNCRGGPA----PGWVHSFTMTEHYVVVPEMPLQYS----V 266
++ + P NE +V C P P + HSF M+E+Y++ E P++ + +
Sbjct: 220 IIEVPPQKSNCNETLEGAKVLCSIAPTDNMKPSYYHSFGMSENYIIFIEQPIKLNLLRII 279
Query: 267 QSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAASV-EVPLYMVFHFINAYEEKDKDG 325
S + +P + W P+ HVV K +GK+ ++ FH INA+E++ G
Sbjct: 280 TSKFRGKPIS-EGINWEPQYNTRFHVVDKRTGKVLPGQWYTKPFVTFHQINAFEDR---G 335
Query: 326 RVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDV 360
V+ + CC+ + T + L+N+R G D+
Sbjct: 336 CVVLDL--CCQDDGKTLAV--YKLQNMRK-SGADL 365
Score = 240 (89.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 51/122 (41%), Positives = 75/122 (61%)
Query: 386 DPEEHGRGVDMCSINPA-YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGI 444
D E+ G++ IN + Y G+KYRY Y G + +SL K+D+ + K W E+G
Sbjct: 424 DGFENFGGLEFPQINYSQYSGRKYRYFYGCGFRHFIG--DSLMKVDVETKNFKIWQEDGS 481
Query: 445 VPSEPLFVARPGATDEDDGVVISMI--SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGF 502
PSEP+FV P AT ED GV++S++ ++N A++++LD TF E+ RA P +PYGF
Sbjct: 482 YPSEPVFVPVPNATAEDSGVILSVVISPDENRSAFLLVLDAETFRELGRAEVPVQMPYGF 541
Query: 503 HG 504
HG
Sbjct: 542 HG 543
>UNIPROTKB|Q9YGX2 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0052884 "all-trans-retinyl-palmitate hydrolase, 11-cis retinol
forming activity" evidence=IEA] [GO:0052885
"all-trans-retinyl-ester hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0031090 "organelle membrane" evidence=IEA] GO:GO:0005783
GO:GO:0005886 GO:GO:0046872 GO:GO:0007601 GO:GO:0050896
GO:GO:0016853 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK GO:GO:0052885
GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AB017594 IPI:IPI00584895
RefSeq:NP_990215.1 UniGene:Gga.408 ProteinModelPortal:Q9YGX2
STRING:Q9YGX2 GeneID:395700 KEGG:gga:395700 InParanoid:Q9YGX2
NextBio:20815770 Uniprot:Q9YGX2
Length = 533
Score = 327 (120.2 bits), Expect = 3.5e-43, Sum P(2) = 3.5e-43
Identities = 103/361 (28%), Positives = 163/361 (45%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP+WL G+ LR GPG++ +G F HLFDG A+L K F K G + R + T+A
Sbjct: 30 VTGRIPTWLRGSLLRCGPGLFEVGAEPFYHLFDGQALLHKFDF-KEGHVTYHRRFVRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDNA +Y +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTYAYPDPCKNIFSRFFSYFKGVEVTDNALVNVYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPG----YLV 218
ET + I +PDTL+T+ + + + ++HP V +D + + + Y +
Sbjct: 148 ETNFITKI-NPDTLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIGNCFGKNFSLAYNI 206
Query: 219 VRMEP-------GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
+R+ P N+ +V+ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 IRIPPLQADKEDPMNKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLKFLS 266
Query: 272 AEP--SALYQ--FEWRPERKAFLHVVCKASGKIA-ASVEVPLYMVFHFINAYEEKDKDGR 326
+ A Y FE +LHV K G++ + +FH IN +E+ +G
Sbjct: 267 SWSLWGANYMDCFESNETMGVWLHVAEKKKGRLLNIKYRTSAFNLFHHINTFED---NG- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQ-----DVLPDARVGRFTIPF--DGSQFG 379
+I D C + L L NLR+ + + P R+ +P D + G
Sbjct: 323 --FLIVDLCTWKGFEFVYNYLYLANLRANWDEVKKQAEKAPQPEARRYVLPLRIDKADTG 380
Query: 380 K 380
K
Sbjct: 381 K 381
Score = 188 (71.2 bits), Expect = 3.5e-43, Sum P(2) = 3.5e-43
Identities = 40/105 (38%), Positives = 58/105 (55%)
Query: 403 YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDD 462
Y GK Y Y Y +G P+ L KL++ ++ W E PSEP+FV+ P A +EDD
Sbjct: 426 YGGKPYTYTYGLGLNH--FVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDD 483
Query: 463 GVVISMISEKNGG---AYVVLLDGSTFEEIARARFPFGLPYGFHG 504
GVV+S++ G AY+++L+ E+ARA +P FHG
Sbjct: 484 GVVLSIVISPGSGPKPAYLLILNAKDMSEVARAEVEVNIPVTFHG 528
>UNIPROTKB|Q9BYV7 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016119 "carotene metabolic process"
evidence=IDA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IDA] [GO:0042573 "retinoic acid
metabolic process" evidence=NAS] [GO:0042574 "retinal metabolic
process" evidence=NAS] [GO:0005622 "intracellular" evidence=IC]
[GO:0055114 "oxidation-reduction process" evidence=IDA] [GO:0016121
"carotene catabolic process" evidence=IDA] [GO:0005739
"mitochondrion" evidence=ISS;TAS] [GO:0016116 "carotenoid metabolic
process" evidence=ISS] [GO:0051881 "regulation of mitochondrial
membrane potential" evidence=ISS] [GO:2000377 "regulation of
reactive oxygen species metabolic process" evidence=ISS]
GO:GO:0005739 GO:GO:0046872 GO:GO:0051881 GO:GO:0016702
GO:GO:0042573 GO:GO:0042574 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:AF276432 EMBL:AK027801 EMBL:EF444956
EMBL:AP002884 EMBL:AJ290393 IPI:IPI00472555 IPI:IPI00479961
IPI:IPI00978312 RefSeq:NP_001032367.2 RefSeq:NP_001243326.1
UniGene:Hs.728325 ProteinModelPortal:Q9BYV7 SMR:Q9BYV7
STRING:Q9BYV7 PhosphoSite:Q9BYV7 DMDM:308153680 PaxDb:Q9BYV7
PRIDE:Q9BYV7 Ensembl:ENST00000357685 Ensembl:ENST00000393032
Ensembl:ENST00000438022 Ensembl:ENST00000526088
Ensembl:ENST00000531169 GeneID:83875 KEGG:hsa:83875 UCSC:uc001pne.1
UCSC:uc009yyn.3 CTD:83875 GeneCards:GC11P112046 HGNC:HGNC:18503
HPA:HPA039825 HPA:HPA040695 MIM:611740 neXtProt:NX_Q9BYV7
PharmGKB:PA162377424 InParanoid:Q9BYV7 KO:K10252 OMA:VSLNAPE
OrthoDB:EOG45B1FD BioCyc:MetaCyc:G66-33846-MONOMER ChiTaRS:BCO2
GenomeRNAi:83875 NextBio:72911 ArrayExpress:Q9BYV7 Bgee:Q9BYV7
CleanEx:HS_BCO2 Genevestigator:Q9BYV7 GermOnline:ENSG00000197580
GO:GO:0016121 GO:GO:0016116 GO:GO:2000377 Uniprot:Q9BYV7
Length = 579
Score = 282 (104.3 bits), Expect = 4.3e-43, Sum P(2) = 4.3e-43
Identities = 103/359 (28%), Positives = 164/359 (45%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G P WLNG+ LR GPG + G+ + H FDG A+L + K G + + ++++
Sbjct: 72 VWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAK-GTVTYRSKFLQSDT 130
Query: 103 YKAAKKNKKLCYREFSVSPKPD---N-FLAYVGELAKLFSGASLTDNAN-NGIYKLGDGR 157
YKA ++ EF PD N F ++ A++TDN N N + GD
Sbjct: 131 YKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFELPGKAAAMTDNTNVNYVRYKGD-Y 189
Query: 158 IICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP--- 214
+C TET + VD +TL+ K ++S + ++HP D + + P
Sbjct: 190 YLC-TETNFMNK-VDIETLEKTEKVDWSKFIAVNGATAHPHYDLDGTAYNMGNSFGPYGF 247
Query: 215 GYLVVRMEPGTNE--RKVIG-RVNCRGGPA----PGWVHSFTMTEHYVVVPEMPLQYSVQ 267
Y V+R+ P + + G +V C P + HSF MT +Y++ E PL+ ++
Sbjct: 248 SYKVIRVPPEKVDLGETIHGVQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLW 307
Query: 268 SLL--KAEPSALYQ-FEWRPERKAFLHVVCKASGKIAAS--VEVPLYMVFHFINAYEEKD 322
+ K A W P+ HVV K +G++ P ++ FH INA+E++
Sbjct: 308 KIATSKIRGKAFSDGISWEPQCNTRFHVVEKRTGQLLPGRYYSKP-FVTFHQINAFEDQ- 365
Query: 323 KDGRVIAVIADCCEHNADTTIIETLSLKNLRSF-HGQDVLPDARVG----RFTIPFDGS 376
G VI + CC+ N T +E L+NLR G D + ++ RF +P + S
Sbjct: 366 --GCVIIDL--CCQDNGRT--LEVYQLQNLRKAGEGLDQVHNSAAKSFPRRFVLPLNVS 418
Score = 244 (91.0 bits), Expect = 4.3e-43, Sum P(2) = 4.3e-43
Identities = 49/126 (38%), Positives = 75/126 (59%)
Query: 386 DPEEHGRGVDMCSIN-PAYLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGI 444
D E+ G G++ I + GKKY + Y G + +SL K+D+V + K W E+G
Sbjct: 456 DLEKEG-GIEFPQIYYDRFSGKKYHFFYGCGFRHLVG--DSLIKVDVVNKTLKVWREDGF 512
Query: 445 VPSEPLFVARPGATDEDDGVVISMI--SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGF 502
PSEP+FV PG +ED GV++S++ +N ++++LD FEE+ RA P +PYGF
Sbjct: 513 YPSEPVFVPAPGTNEEDGGVILSVVITPNQNESNFILVLDAKNFEELGRAEVPVQMPYGF 572
Query: 503 HGCWVP 508
HG ++P
Sbjct: 573 HGTFIP 578
>UNIPROTKB|F1S830 [details] [associations]
symbol:RPE65 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071257 "cellular response to electrical stimulus"
evidence=IEA] [GO:0060042 "retina morphogenesis in camera-type eye"
evidence=IEA] [GO:0042574 "retinal metabolic process" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007468
"regulation of rhodopsin gene expression" evidence=IEA] [GO:0004744
"retinal isomerase activity" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:WLHVADK EMBL:CU929726 Ensembl:ENSSSCT00000004199
Uniprot:F1S830
Length = 533
Score = 318 (117.0 bits), Expect = 8.1e-43, Sum P(2) = 8.1e-43
Identities = 111/405 (27%), Positives = 181/405 (44%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WL G+ LR GPG++ +G F HLFDG A+L K F K G + R I T+A
Sbjct: 30 VTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDF-KEGHVTYHRRFIRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDNA IY +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPG----YLV 218
ET + I +P+TL+T+ + + + + ++HP + +D + + + Y +
Sbjct: 148 ETNFITKI-NPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNI 206
Query: 219 VRMEP-------GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
V++ P ++ +++ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 VKIPPLQADKQDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLS 266
Query: 272 AEP--SALYQ--FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
+ A Y FE +LH+ K K + + +FH IN YE+ +
Sbjct: 267 SWSLWGANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSPFNLFHHINTYEDNE---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDAR------VGRFTIPF--DGSQF 378
+I D C + L L NLR + ++V +AR V R+ +P D +
Sbjct: 323 --FLIVDLCCWKGFEFVYNYLYLANLRE-NWEEVKKNARKAPQPEVRRYVLPLNIDKADT 379
Query: 379 GKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFP 423
GK V P + +CS +L + ++ G ++ FP
Sbjct: 380 GK-NLVTLPNTTATAI-LCSDETIWLEPEVLFS---GPRQAFEFP 419
Score = 196 (74.1 bits), Expect = 8.1e-43, Sum P(2) = 8.1e-43
Identities = 42/105 (40%), Positives = 59/105 (56%)
Query: 403 YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDD 462
Y GK Y YAY +G P+ L KL++ ++ W E PSEP+FVA P A +EDD
Sbjct: 426 YGGKPYTYAYGLGLNH--FVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVAHPDALEEDD 483
Query: 463 GVVISMISEKNGG---AYVVLLDGSTFEEIARARFPFGLPYGFHG 504
GVV+S++ G AY+++L+ E+ARA +P FHG
Sbjct: 484 GVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVTFHG 528
>ZFIN|ZDB-GENE-081104-505 [details] [associations]
symbol:rpe65c "retinal pigment epithelium-specific
protein 65c" species:7955 "Danio rerio" [GO:0008152 "metabolic
process" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0050251 "retinol isomerase
activity" evidence=IDA] ZFIN:ZDB-GENE-081104-505
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:CR759968 Ensembl:ENSDART00000038725
Uniprot:K9J6Q0
Length = 532
Score = 339 (124.4 bits), Expect = 9.3e-43, Sum P(2) = 9.3e-43
Identities = 114/405 (28%), Positives = 185/405 (45%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V GEIP+WL+G+ LR GPG++ +G+ F HLFDG A+L K K+GR+ R I T+A
Sbjct: 30 VSGEIPAWLSGSLLRMGPGLFEVGDEPFYHLFDGQALLHKFDL-KDGRVTYHRRFIRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF + PD F G +TDN IY +G+ C T
Sbjct: 89 YVRAMTEKRVVITEFGTTAYPDPCKNIFSRFFTYFQGIEVTDNCLVNIYPIGEDFYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDL----LNPGYLV 218
ET + VDPDTL+T+ K + + L ++HP + D + + + ++ Y +
Sbjct: 148 ETNFITK-VDPDTLETVKKVDLCNYLSVNGLTAHPHIEADGTVYNIGNCFGKNMSLAYNI 206
Query: 219 VRMEPGTNER-------KVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
V++ P ++ K++ + P +VHSF +TE++ V E P++ ++ L
Sbjct: 207 VKIPPLQEDKSDQFEKSKILVQFPSSERFKPSYVHSFGITENHFVFVETPVKINLLKFLT 266
Query: 272 AEP--SALYQ--FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
+ + Y FE + + H+ K GK I + +FH IN +E++
Sbjct: 267 SWSIRGSNYMDCFESNDKMGTWFHLAAKNPGKYIDHKFRTSAFNIFHHINCFEDQG---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDV------LPDARVGRFTIPFD--GSQF 378
++ D C + L L NLR + ++V P V R+ +P D +
Sbjct: 323 --FIVVDLCTWKGHEFVYNYLYLANLRQ-NWEEVKKAALRAPQPEVRRYVLPLDIHREEQ 379
Query: 379 GKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFP 423
GK V P V MCS +L + ++ G ++ FP
Sbjct: 380 GK-NLVSLPYTTATAV-MCSDGTVWLEPEVLFS---GPRQAFEFP 419
Score = 168 (64.2 bits), Expect = 9.3e-43, Sum P(2) = 9.3e-43
Identities = 38/107 (35%), Positives = 58/107 (54%)
Query: 405 GKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGV 464
GK Y +AY +G P+ + KL++ ++ W E PSEPLFV P A DEDDGV
Sbjct: 428 GKDYTFAYGLGLNH--FVPDRICKLNVKSKETWIWQEPDAYPSEPLFVQSPDAEDEDDGV 485
Query: 465 VISMISEKNGG---AYVVLLDGSTFEEIARARFPFGLPYGFHGCWVP 508
++S++ + A++++L + EIARA +P HG + P
Sbjct: 486 LLSIVVKPGVSQRPAFLLILKATDLTEIARAEVDVLIPLTLHGIYKP 532
>UNIPROTKB|E2RS36 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 OMA:VSLNAPE GO:GO:0016121
EMBL:AAEX03003490 Ensembl:ENSCAFT00000022164 NextBio:20854619
Uniprot:E2RS36
Length = 575
Score = 275 (101.9 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 99/342 (28%), Positives = 159/342 (46%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G+ P WL+G LR GPG + G+ + H FDG A+L + EK G + + ++++
Sbjct: 72 VRGQFPEWLSGYLLRIGPGKFEFGKDEYSHWFDGMALLHQFRMEK-GTVTYRSKFLQSDT 130
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNAN-NGIYKLGDGRIICL 161
YKA + ++ EF PD F ++TDN N N + GD +
Sbjct: 131 YKANSAHDRIVISEFGTLALPDPCKNVFERFMSKFELPAITDNTNVNYVQYKGDYYVS-- 188
Query: 162 TETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP-G--YLV 218
TET + VD TL+ K ++S + ++HP D + + P G Y V
Sbjct: 189 TETNFMNK-VDIKTLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSYGPHGSCYNV 247
Query: 219 VRMEPGTNE--RKVIG-RVNCRGGPA----PGWVHSFTMTEHYVVVPEMPLQYSVQSLL- 270
+++ P + V G +V C A P + HSF MT +Y++ E PL+ ++ ++
Sbjct: 248 IQIPPEKVDLGETVHGAQVICSIASAERMKPSYYHSFGMTRNYIIFIEQPLKMNLWKIVT 307
Query: 271 -KAEPSALYQ-FEWRPERKAFLHVVCKASGKIAASVEVPL-YMVFHFINAYEEKDKDGRV 327
+ A W P+ HVV K +G++ + ++ FH INA+E++ G V
Sbjct: 308 SRIRGKAFSDGISWEPQYNTRFHVVDKHTGQLLPGMYYTKPFVTFHQINAFEDQ---GCV 364
Query: 328 IAVIADCCEHNADTTIIETLSLKNLRSF-HGQDVLPDARVGR 368
VI CC+ D +E L+NLR G D + ++ VGR
Sbjct: 365 --VIDLCCQD--DGRSLEVYQLQNLRKAGEGLDQVYNS-VGR 401
Score = 248 (92.4 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 52/125 (41%), Positives = 76/125 (60%)
Query: 386 DPEEHGRGVDMCSINPA-YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGI 444
D EE G GV+ IN + GKKYR+ Y G + +SL K+D+V + W E+G
Sbjct: 452 DLEEEG-GVEFPQINYGQFSGKKYRFFYGCGFRHLVG--DSLIKVDVVNKTLTIWREDGF 508
Query: 445 VPSEPLFVARPGATDEDDGVVISMI--SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGF 502
PSEP+FV PG +ED GV++S++ ++N ++++LD FEE+ RA P +PYGF
Sbjct: 509 YPSEPVFVPAPGTREEDGGVILSVVITPDQNENNFLLVLDAKNFEELGRAEVPVRMPYGF 568
Query: 503 HGCWV 507
HG +V
Sbjct: 569 HGTFV 573
>UNIPROTKB|Q16518 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9606 "Homo
sapiens" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0004744 "retinal isomerase activity" evidence=IEA] [GO:0007468
"regulation of rhodopsin gene expression" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0042574 "retinal metabolic
process" evidence=IEA] [GO:0060042 "retina morphogenesis in
camera-type eye" evidence=IEA] [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0031090 "organelle membrane" evidence=IEA]
[GO:0006776 "vitamin A metabolic process" evidence=TAS]
GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 EMBL:CH471059
GO:GO:0007601 Orphanet:791 GO:GO:0050896 GO:GO:0016853 Orphanet:65
GO:GO:0006776 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 Orphanet:180 OrthoDB:EOG47M1XK
GO:GO:0052885 GO:GO:0052884 CTD:6121 KO:K11158 EMBL:U18991
EMBL:U20510 EMBL:U20476 EMBL:U20477 EMBL:U20478 EMBL:U20479
EMBL:U20481 EMBL:U20482 EMBL:U20484 EMBL:U20485 EMBL:U20486
EMBL:AF039868 EMBL:AF039855 EMBL:AF039856 EMBL:AF039857
EMBL:AF039858 EMBL:AF039859 EMBL:AF039860 EMBL:AF039861
EMBL:AF039862 EMBL:AF039863 EMBL:AF039864 EMBL:AF039865
EMBL:AF039866 EMBL:AF039867 EMBL:AL139413 EMBL:BC075035
EMBL:BC075036 IPI:IPI00029250 RefSeq:NP_000320.1 UniGene:Hs.2133
ProteinModelPortal:Q16518 SMR:Q16518 STRING:Q16518
PhosphoSite:Q16518 DMDM:44888872 PRIDE:Q16518
Ensembl:ENST00000262340 GeneID:6121 KEGG:hsa:6121 UCSC:uc001dei.1
GeneCards:GC01M068894 HGNC:HGNC:10294 MIM:180069 MIM:204100
MIM:613794 neXtProt:NX_Q16518 PharmGKB:PA34655 InParanoid:Q16518
OMA:WLHVADK PhylomeDB:Q16518 BioCyc:MetaCyc:ENSG00000116745-MONOMER
ChiTaRS:RPE65 GenomeRNAi:6121 NextBio:23773 ArrayExpress:Q16518
Bgee:Q16518 CleanEx:HS_RPE65 Genevestigator:Q16518
GermOnline:ENSG00000116745 Uniprot:Q16518
Length = 533
Score = 316 (116.3 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 111/405 (27%), Positives = 184/405 (45%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WL G+ LR GPG++ +G F HLFDG A+L K F K G + R I T+A
Sbjct: 30 VTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDF-KEGHVTYHRRFIRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDNA +Y +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPG----YLV 218
ET + I +P+TL+T+ + + + + ++HP + +D + + + Y +
Sbjct: 148 ETNFITKI-NPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNI 206
Query: 219 VRMEP-------GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
V++ P ++ +++ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 VKIPPLQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLS 266
Query: 272 AEP--SALYQ--FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
+ A Y FE +LH+ K K + + +FH IN YE+ +G
Sbjct: 267 SWSLWGANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSPFNLFHHINTYED---NGF 323
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDAR------VGRFTIPF--DGSQF 378
+I + CC + + L L NLR + ++V +AR V R+ +P D +
Sbjct: 324 LIVDL--CCWKGFEF-VYNYLYLANLRE-NWEEVKKNARKAPQPEVRRYVLPLNIDKADT 379
Query: 379 GKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFP 423
GK V P + +CS +L + ++ G ++ FP
Sbjct: 380 GK-NLVTLPNTTATAI-LCSDETIWLEPEVLFS---GPRQAFEFP 419
Score = 196 (74.1 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 41/105 (39%), Positives = 59/105 (56%)
Query: 403 YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDD 462
Y GK Y YAY +G P+ L KL++ ++ W E PSEP+FV+ P A +EDD
Sbjct: 426 YCGKPYTYAYGLGLNH--FVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDD 483
Query: 463 GVVISMISEKNGG---AYVVLLDGSTFEEIARARFPFGLPYGFHG 504
GVV+S++ G AY+++L+ E+ARA +P FHG
Sbjct: 484 GVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVTFHG 528
>UNIPROTKB|F1SM94 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 CTD:83875 KO:K10252 OMA:VSLNAPE
GO:GO:0016121 EMBL:CU657951 RefSeq:XP_003129902.2 UniGene:Ssc.25348
Ensembl:ENSSSCT00000016405 GeneID:100517547 KEGG:ssc:100517547
Uniprot:F1SM94
Length = 575
Score = 280 (103.6 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 95/326 (29%), Positives = 152/326 (46%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G +P WLNG LR GPG + G+ + H FDG A+L + EK G ++ + ++++
Sbjct: 72 VRGHVPKWLNGYLLRIGPGKFEFGKDKYNHWFDGMALLHQFKIEK-GTVMYRSKFLQSDT 130
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNAN-NGIYKLGDGRIICL 161
YKA + ++ EF PD F ++TDN N N + GD +
Sbjct: 131 YKANSVHDRIVVSEFGTLALPDPCKNIFERFMSKFELPAMTDNTNVNYVQYKGDYYLS-- 188
Query: 162 TETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP-G--YLV 218
TET + VD +TL+ K ++S + ++HP D + + G Y V
Sbjct: 189 TETNFMNK-VDIETLEKKEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSFGSHGSCYHV 247
Query: 219 VRMEP--GTNERKVIG-RVNCRGGPA----PGWVHSFTMTEHYVVVPEMPLQYSVQSLL- 270
+R+ P E + G +V C A P + HSF MT +Y++ E P++ ++ ++
Sbjct: 248 IRVPPEKADLEETIHGAQVICSIASAERMKPSYYHSFGMTRNYIIFIEQPVKMNLWKIIT 307
Query: 271 -KAEPSALYQ-FEWRPERKAFLHVVCKASGKIAASVEVPL-YMVFHFINAYEEKDKDGRV 327
K A W P+ HVV K +G++ + ++ FH INA+E++ G V
Sbjct: 308 SKIRGKAFSDGISWEPQYNTRFHVVDKHTGQLLPGMYYSKPFVTFHQINAFEDQ---GCV 364
Query: 328 IAVIADCCEHNADTTIIETLSLKNLR 353
VI CC+ D +E L+NLR
Sbjct: 365 --VIDLCCQD--DGRNLEVYQLQNLR 386
Score = 241 (89.9 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 52/125 (41%), Positives = 74/125 (59%)
Query: 386 DPEEHGRGVDMCSINPA-YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGI 444
D EE G GV+ IN + GKKYR+ Y G + +SL K+D+V + W EE
Sbjct: 452 DLEEEG-GVEFPQINYGQFSGKKYRFFYGCGFRHLVG--DSLIKVDVVNKTLTVWREESF 508
Query: 445 VPSEPLFVARPGATDEDDGVVISMI--SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGF 502
PSEP+FV PG +ED GV++S++ +N ++++LD FEE+ RA P +PYGF
Sbjct: 509 YPSEPIFVPVPGTNEEDGGVILSVVITPNQNERNFLLVLDAKNFEELGRAEVPVQMPYGF 568
Query: 503 HGCWV 507
HG +V
Sbjct: 569 HGTFV 573
>ZFIN|ZDB-GENE-050410-16 [details] [associations]
symbol:rpe65b "retinal pigment epithelium-specific
protein 65b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
ZFIN:ZDB-GENE-050410-16 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0016787 GeneTree:ENSGT00500000044783 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AY646887
EMBL:CR759968 EMBL:BC133985 EMBL:BC155753 IPI:IPI00851384
RefSeq:NP_001082902.2 UniGene:Dr.79444 ProteinModelPortal:A9C3R9
PRIDE:A9C3R9 DNASU:100002865 Ensembl:ENSDART00000076542
GeneID:100002865 KEGG:dre:100002865 CTD:100002865
BioCyc:MetaCyc:MONOMER-16789 NextBio:20785619 Bgee:A9C3R9
Uniprot:A9C3R9
Length = 532
Score = 337 (123.7 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 115/406 (28%), Positives = 186/406 (45%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQ-IETE 101
V G+IP+WL+G+ LR GPG++ IG+ F HLFDG A++ K K+GR + HR+ I T+
Sbjct: 30 VSGKIPAWLSGSLLRMGPGLFEIGDEPFNHLFDGQALIHKFDL-KDGR-VTYHRKFIRTD 87
Query: 102 AYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICL 161
AY A K++ E + PD F G +TDN + IY +G+ C
Sbjct: 88 AYVRAMTEKRVVITELGTAAYPDPCKNIFSRFFTYFQGTEVTDNCSVNIYPIGEDFYAC- 146
Query: 162 TETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDL----LNPGYL 217
TET + V+PDTL+T+ K + + L ++HP + D + + + ++ Y
Sbjct: 147 TETNFITK-VNPDTLETIKKVDLCNYLSVNGLTAHPHIEADGTVYNIGNCFGKNMSLAYN 205
Query: 218 VVRMEPGTNER-------KVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLL 270
+V++ P E+ KV+ + P +VHSF MTE++ V E P++ ++ L
Sbjct: 206 IVKIPPLQEEKSDPLAMSKVLVQFPSSERFKPSYVHSFGMTENHFVFVETPVKINLLKFL 265
Query: 271 KAEP--SALYQ--FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDG 325
+ + Y FE + H+ K GK I + +FH IN +E++
Sbjct: 266 TSWSIRGSNYMDCFESNDRMGTWFHLAAKNPGKYIDHKFRTSAFNIFHHINCFEDQG--- 322
Query: 326 RVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDV------LPDARVGRFTIPFD--GSQ 377
++ D C + L L NLR + ++V P V R+ +P D +
Sbjct: 323 ---FIVVDLCTWKGHEFVYNYLYLANLRQ-NWEEVKKAALRAPQPEVRRYVLPLDIHREE 378
Query: 378 FGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFP 423
GK V P V MCS +L + ++ G ++ FP
Sbjct: 379 QGK-NLVSLPYTTATAV-MCSDGTVWLEPEVLFS---GPRQAFEFP 419
Score = 168 (64.2 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 38/107 (35%), Positives = 58/107 (54%)
Query: 405 GKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGV 464
GK Y +AY +G P+ + KL++ ++ W E PSEPLFV P A DEDDGV
Sbjct: 428 GKDYTFAYGLGLNH--FVPDRICKLNVKSKETWIWQEPDAYPSEPLFVQSPDAEDEDDGV 485
Query: 465 VISMISEKNGG---AYVVLLDGSTFEEIARARFPFGLPYGFHGCWVP 508
++S++ + A++++L + EIARA +P HG + P
Sbjct: 486 LLSIVVKPGVSQRPAFLLILKATDLTEIARAEVDVLIPLTLHGIYKP 532
>UNIPROTKB|F1PXT9 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9615
"Canis lupus familiaris" [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0042574
"retinal metabolic process" evidence=IEA] [GO:0008286 "insulin
receptor signaling pathway" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007468 "regulation of rhodopsin gene
expression" evidence=IEA] [GO:0004744 "retinal isomerase activity"
evidence=IEA] GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 OMA:WLHVADK EMBL:AAEX03004935
EMBL:AAEX03004936 Ensembl:ENSCAFT00000032537 Uniprot:F1PXT9
Length = 533
Score = 314 (115.6 bits), Expect = 5.7e-42, Sum P(2) = 5.7e-42
Identities = 103/362 (28%), Positives = 165/362 (45%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WL G+ LR GPG++ +G F HLFDG A+L K F K G + R I T+A
Sbjct: 30 VTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDF-KEGHVTYHRRFIRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDNA +Y +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPG----YLV 218
ET + I +P+TL+T+ + + + + ++HP + +D + + + Y +
Sbjct: 148 ETNFITKI-NPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNI 206
Query: 219 VRMEP-------GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
V++ P ++ +V+ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 VKIPPLQADKEDPISKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLKFLS 266
Query: 272 AEP--SALYQ--FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
+ A Y FE +LH+ K K + + +FH IN YE+ +
Sbjct: 267 SWSLWGANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSSFNLFHHINTYEDNE---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDAR------VGRFTIPF--DGSQF 378
+I D C + L L NLR + ++V +AR V R+ +P D +
Sbjct: 323 --FLIVDLCCWKGFEFVYNYLYLANLRE-NWEEVKKNARKAPQPEVRRYVLPLNIDKADT 379
Query: 379 GK 380
GK
Sbjct: 380 GK 381
Score = 193 (73.0 bits), Expect = 5.7e-42, Sum P(2) = 5.7e-42
Identities = 41/105 (39%), Positives = 59/105 (56%)
Query: 403 YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDD 462
Y GK Y YAY +G P+ L KL++ ++ W E PSEP+FV+ P A +EDD
Sbjct: 426 YGGKPYTYAYGLGLNH--FVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDD 483
Query: 463 GVVISMISEKNGG---AYVVLLDGSTFEEIARARFPFGLPYGFHG 504
GVV+S++ G AY+++L+ E+ARA +P FHG
Sbjct: 484 GVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVTFHG 528
>UNIPROTKB|Q28175 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9913 "Bos
taurus" [GO:0031090 "organelle membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0042574
"retinal metabolic process" evidence=IEA] [GO:0008286 "insulin
receptor signaling pathway" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007468 "regulation of rhodopsin gene
expression" evidence=IEA] [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0052885 "all-trans-retinyl-ester hydrolase,
11-cis retinol forming activity" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 GO:GO:0007601
GO:GO:0050896 GO:GO:0016853 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK GO:GO:0052885
GO:GO:0052884 EMBL:L11356 EMBL:X66277 IPI:IPI00711777 PIR:A47143
RefSeq:NP_776878.1 UniGene:Bt.108 PDB:3FSN PDB:3KVC PDB:4F2Z
PDB:4F30 PDB:4F3A PDB:4F3D PDBsum:3FSN PDBsum:3KVC PDBsum:4F2Z
PDBsum:4F30 PDBsum:4F3A PDBsum:4F3D ProteinModelPortal:Q28175
DIP:DIP-48993N STRING:Q28175 PRIDE:Q28175
Ensembl:ENSBTAT00000043702 GeneID:282043 KEGG:bta:282043 CTD:6121
InParanoid:Q28175 KO:K11158 BRENDA:5.2.1.7 EvolutionaryTrace:Q28175
NextBio:20805904 Uniprot:Q28175
Length = 533
Score = 313 (115.2 bits), Expect = 7.6e-42, Sum P(2) = 7.6e-42
Identities = 111/405 (27%), Positives = 180/405 (44%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WL G+ LR GPG++ +G F HLFDG A+L K F K G + R I T+A
Sbjct: 30 VTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDF-KEGHVTYHRRFIRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDNA IY +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPG----YLV 218
ET + V+P+TL+T+ + + + + ++HP + +D + + + Y +
Sbjct: 148 ETNFITK-VNPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNI 206
Query: 219 VRMEP-------GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
V++ P ++ +++ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 VKIPPLQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLS 266
Query: 272 AEP--SALYQ--FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
+ A Y FE +LH+ K K I + +FH IN YE+ +
Sbjct: 267 SWSLWGANYMDCFESNETMGVWLHIADKKRKKYINNKYRTSPFNLFHHINTYEDHE---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDAR------VGRFTIPF--DGSQF 378
+I D C + L NLR + ++V +AR V R+ +P D +
Sbjct: 323 --FLIVDLCCWKGFEFVYNYSYLANLRE-NWEEVKKNARKAPQPEVRRYVLPLNIDKADT 379
Query: 379 GKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFP 423
GK V P + +CS +L + ++ G ++ FP
Sbjct: 380 GK-NLVTLPNTTATAI-LCSDETIWLEPEVLFS---GPRQAFEFP 419
Score = 193 (73.0 bits), Expect = 7.6e-42, Sum P(2) = 7.6e-42
Identities = 41/105 (39%), Positives = 59/105 (56%)
Query: 403 YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDD 462
Y GK Y YAY +G P+ L KL++ ++ W E PSEP+FV+ P A +EDD
Sbjct: 426 YGGKPYTYAYGLGLNH--FVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDD 483
Query: 463 GVVISMISEKNGG---AYVVLLDGSTFEEIARARFPFGLPYGFHG 504
GVV+S++ G AY+++L+ E+ARA +P FHG
Sbjct: 484 GVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVTFHG 528
>RGD|621396 [details] [associations]
symbol:Rpe65 "retinal pigment epithelium 65" species:10116
"Rattus norvegicus" [GO:0001654 "eye development" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0031090 "organelle membrane" evidence=IEA] [GO:0042574 "retinal
metabolic process" evidence=IMP] [GO:0044297 "cell body"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IMP]
RGD:621396 GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 GO:GO:0007601
GO:GO:0050896 GO:GO:0016853 GO:GO:0042574 GO:GO:0044297
GO:GO:0001654 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090 GO:GO:0052885
GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AF035673 IPI:IPI00196676
RefSeq:NP_446014.1 UniGene:Rn.76724 ProteinModelPortal:O70276
GeneID:89826 KEGG:rno:89826 NextBio:617740 Genevestigator:O70276
Uniprot:O70276
Length = 533
Score = 315 (115.9 bits), Expect = 8.9e-42, Sum P(2) = 8.9e-42
Identities = 112/405 (27%), Positives = 181/405 (44%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WL G+ LR GPG++ +G F HLFDG A+L K F K G + R I T+A
Sbjct: 30 VTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDF-KEGHVTYYRRFIRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDNA IY +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPG----YLV 218
ET + I +P+TL+T+ + + + + ++HP + D + + + Y +
Sbjct: 148 ETNFITKI-NPETLETIKQVDLCNYVSVNGATAHPHIESDGTVYNIGNCFGKNFTVAYNI 206
Query: 219 VRMEP-------GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
+++ P N+ +V+ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 IKIPPLKADKEDPINKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLS 266
Query: 272 AEP--SALYQ--FEWRPERKAFLHVVCKASGKIAAS-VEVPLYMVFHFINAYEEKDKDGR 326
+ A Y FE +LHV K K + + +FH IN YE+ +G
Sbjct: 267 SWSLWGANYMDCFESNESMGVWLHVADKKRRKYFNNKYRTSPFNLFHHINTYED---NGF 323
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDV------LPDARVGRFTIPF--DGSQF 378
+I + CC + + L L NLR + ++V P V R+ +P D +
Sbjct: 324 LIVDL--CCWKGFEF-VYNYLYLANLRE-NWEEVKRNAMKAPQPEVRRYVLPLTIDKADT 379
Query: 379 GKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFP 423
G+ V P + +CS +L + ++ G ++ FP
Sbjct: 380 GR-NLVTLPHTTATAI-LCSDETIWLEPEVLFS---GPRQAFEFP 419
Score = 190 (71.9 bits), Expect = 8.9e-42, Sum P(2) = 8.9e-42
Identities = 41/103 (39%), Positives = 59/103 (57%)
Query: 405 GKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGV 464
GK Y YAY +G P+ L KL++ ++ W E PSEP+FV++P A +EDDGV
Sbjct: 428 GKPYTYAYGLGLNH--FVPDKLCKLNVKTKEIWMWQEPDSYPSEPIFVSQPDALEEDDGV 485
Query: 465 VISMISEKNGG---AYVVLLDGSTFEEIARARFPFGLPYGFHG 504
V+S++ G AY+++L+ EIARA +P FHG
Sbjct: 486 VLSVVVSPGAGQKPAYLLVLNAKDLSEIARAEVETNIPVTFHG 528
>UNIPROTKB|Q9TVB8 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9615
"Canis lupus familiaris" [GO:0031090 "organelle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0052885 "all-trans-retinyl-ester hydrolase, 11-cis retinol
forming activity" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] GO:GO:0005783 GO:GO:0005886 GO:GO:0046872
GO:GO:0007601 GO:GO:0050896 GO:GO:0016853 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK
GO:GO:0052885 GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AF084537
EMBL:Y16567 EMBL:AJ506754 EMBL:AJ506755 EMBL:AJ506756 EMBL:AJ506757
EMBL:AJ251207 EMBL:AJ506759 RefSeq:NP_001003176.1 UniGene:Cfa.3665
ProteinModelPortal:Q9TVB8 STRING:Q9TVB8 GeneID:403803
KEGG:cfa:403803 InParanoid:Q9TVB8 NextBio:20817300 Uniprot:Q9TVB8
Length = 533
Score = 314 (115.6 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 103/362 (28%), Positives = 165/362 (45%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WL G+ LR GPG++ +G F HLFDG A+L K F K G + R I T+A
Sbjct: 30 VTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDF-KEGHVTYHRRFIRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDNA +Y +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPG----YLV 218
ET + I +P+TL+T+ + + + + ++HP + +D + + + Y +
Sbjct: 148 ETNFITKI-NPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNI 206
Query: 219 VRMEP-------GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
V++ P ++ +V+ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 VKIPPLQADKEDPISKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLKFLS 266
Query: 272 AEP--SALYQ--FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
+ A Y FE +LH+ K K + + +FH IN YE+ +
Sbjct: 267 SWSLWGANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSSFNLFHHINTYEDNE---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDAR------VGRFTIPF--DGSQF 378
+I D C + L L NLR + ++V +AR V R+ +P D +
Sbjct: 323 --FLIVDLCCWKGFEFVYNYLYLANLRE-NWEEVKKNARKAPQPEVRRYVLPLNIDKADT 379
Query: 379 GK 380
GK
Sbjct: 380 GK 381
Score = 190 (71.9 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 40/103 (38%), Positives = 58/103 (56%)
Query: 405 GKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGV 464
GK Y YAY +G P+ L KL++ ++ W E PSEP+FV+ P A +EDDGV
Sbjct: 428 GKPYTYAYGLGLNH--FVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGV 485
Query: 465 VISMISEKNGG---AYVVLLDGSTFEEIARARFPFGLPYGFHG 504
V+S++ G AY+++L+ E+ARA +P FHG
Sbjct: 486 VLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVTFHG 528
>UNIPROTKB|Q83CU2 [details] [associations]
symbol:CBU_1011 "Lignostilbene-alpha,beta-dioxygenase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISS] EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0016702 HOGENOM:HOG000232156
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:NP_820017.1 GeneID:1208907 KEGG:cbu:CBU_1011 PATRIC:17930741
ProtClustDB:CLSK914477 BioCyc:CBUR227377:GJ7S-1002-MONOMER
Uniprot:Q83CU2
Length = 394
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 115/371 (30%), Positives = 195/371 (52%)
Query: 143 TDNANNGIYKLGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHP---IV 199
TDNAN + + D + + LTET ++ DP TL+ +G Y D L G + ++HP
Sbjct: 41 TDNANVNVSMIAD-KFVALTETPM-PIVFDPQTLERMGVINYEDKLKGNLTTAHPHYDFE 98
Query: 200 TDD--EFLTLLPDLLNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVV 257
T + +LT+ + R+ + R+++G + + PG++HSF MT++YV++
Sbjct: 99 TKEGINYLTVFS--AKSTSQIYRVSHHSKTRELLGSIPVK---EPGYMHSFGMTQNYVIL 153
Query: 258 PEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAASVEVPLYMVFHFINA 317
E P + +LL + F W+P + +++ + +GK + + + FH +NA
Sbjct: 154 AEYPFFVNPLNLLLNGNPFIENFNWKPNKGTHFYLLDRKTGKFQ-NYKTESFFAFHHVNA 212
Query: 318 YEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTIPFDGSQ 377
+EE DK VI D + +T II++L L L ++++ + R+ I S
Sbjct: 213 FEENDK------VIVDIIAY-PNTDIIQSLYLDVLHGETNKNIVSAGELRRYEINLLDSS 265
Query: 378 FGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKR--PCNFPNSLTKLDLVKQK 435
+ +P E R ++ N K Y + Y +G+ + P NF N L K+D V+QK
Sbjct: 266 VNYVVLSEEPIELPR-INYFLSNT----KNYLFVYGVGSDKNDPNNFLNRLLKID-VQQK 319
Query: 436 A-KNWCEEGIVPSEPLFVARPGATDEDDGVVISMI-SEKNGGAYVVLLDGSTFEEIARAR 493
A K W E P EP+FV+ P A EDDGV++S++ + + G +++++LD +F+EIARA
Sbjct: 320 ATKIWKETMCYPGEPVFVSLPNAKKEDDGVILSVVLNAQKGNSFLLILDAVSFKEIARAS 379
Query: 494 FPFGLPYGFHG 504
P +P+GFHG
Sbjct: 380 VPHHIPFGFHG 390
Score = 268 (99.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 76/279 (27%), Positives = 137/279 (49%)
Query: 98 IETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGR 157
+E++AY+ K K+ Y EF+ P F + + FS TDNAN + + D +
Sbjct: 1 MESDAYRYVKAKGKMGYSEFATDPCRSIFKRFF----QAFSPRP-TDNANVNVSMIAD-K 54
Query: 158 IICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHP---IVTDD--EFLTLLPDLL 212
+ LTET ++ DP TL+ +G Y D L G + ++HP T + +LT+
Sbjct: 55 FVALTETPM-PIVFDPQTLERMGVINYEDKLKGNLTTAHPHYDFETKEGINYLTVFS--A 111
Query: 213 NPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLKA 272
+ R+ + R+++G + + PG++HSF MT++YV++ E P + +LL
Sbjct: 112 KSTSQIYRVSHHSKTRELLGSIPVK---EPGYMHSFGMTQNYVILAEYPFFVNPLNLLLN 168
Query: 273 EPSALYQFEWRPERKAFLHVVCKASGKIAASVEVPLYMVFHFINAYEEKDKDGRVIAVIA 332
+ F W+P + +++ + +GK + + + FH +NA+EE DK VI
Sbjct: 169 GNPFIENFNWKPNKGTHFYLLDRKTGKFQ-NYKTESFFAFHHVNAFEENDK------VIV 221
Query: 333 DCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTI 371
D + +T II++L L L ++++ + R+ I
Sbjct: 222 DIIAY-PNTDIIQSLYLDVLHGETNKNIVSAGELRRYEI 259
>TIGR_CMR|CBU_1011 [details] [associations]
symbol:CBU_1011 "dioxygenase, putative" species:227377
"Coxiella burnetii RSA 493" [GO:0008152 "metabolic process"
evidence=ISS] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISS] EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0016702 HOGENOM:HOG000232156
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:NP_820017.1 GeneID:1208907 KEGG:cbu:CBU_1011 PATRIC:17930741
ProtClustDB:CLSK914477 BioCyc:CBUR227377:GJ7S-1002-MONOMER
Uniprot:Q83CU2
Length = 394
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 115/371 (30%), Positives = 195/371 (52%)
Query: 143 TDNANNGIYKLGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHP---IV 199
TDNAN + + D + + LTET ++ DP TL+ +G Y D L G + ++HP
Sbjct: 41 TDNANVNVSMIAD-KFVALTETPM-PIVFDPQTLERMGVINYEDKLKGNLTTAHPHYDFE 98
Query: 200 TDD--EFLTLLPDLLNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVV 257
T + +LT+ + R+ + R+++G + + PG++HSF MT++YV++
Sbjct: 99 TKEGINYLTVFS--AKSTSQIYRVSHHSKTRELLGSIPVK---EPGYMHSFGMTQNYVIL 153
Query: 258 PEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAASVEVPLYMVFHFINA 317
E P + +LL + F W+P + +++ + +GK + + + FH +NA
Sbjct: 154 AEYPFFVNPLNLLLNGNPFIENFNWKPNKGTHFYLLDRKTGKFQ-NYKTESFFAFHHVNA 212
Query: 318 YEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTIPFDGSQ 377
+EE DK VI D + +T II++L L L ++++ + R+ I S
Sbjct: 213 FEENDK------VIVDIIAY-PNTDIIQSLYLDVLHGETNKNIVSAGELRRYEINLLDSS 265
Query: 378 FGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKR--PCNFPNSLTKLDLVKQK 435
+ +P E R ++ N K Y + Y +G+ + P NF N L K+D V+QK
Sbjct: 266 VNYVVLSEEPIELPR-INYFLSNT----KNYLFVYGVGSDKNDPNNFLNRLLKID-VQQK 319
Query: 436 A-KNWCEEGIVPSEPLFVARPGATDEDDGVVISMI-SEKNGGAYVVLLDGSTFEEIARAR 493
A K W E P EP+FV+ P A EDDGV++S++ + + G +++++LD +F+EIARA
Sbjct: 320 ATKIWKETMCYPGEPVFVSLPNAKKEDDGVILSVVLNAQKGNSFLLILDAVSFKEIARAS 379
Query: 494 FPFGLPYGFHG 504
P +P+GFHG
Sbjct: 380 VPHHIPFGFHG 390
Score = 268 (99.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 76/279 (27%), Positives = 137/279 (49%)
Query: 98 IETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGR 157
+E++AY+ K K+ Y EF+ P F + + FS TDNAN + + D +
Sbjct: 1 MESDAYRYVKAKGKMGYSEFATDPCRSIFKRFF----QAFSPRP-TDNANVNVSMIAD-K 54
Query: 158 IICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHP---IVTDD--EFLTLLPDLL 212
+ LTET ++ DP TL+ +G Y D L G + ++HP T + +LT+
Sbjct: 55 FVALTETPM-PIVFDPQTLERMGVINYEDKLKGNLTTAHPHYDFETKEGINYLTVFS--A 111
Query: 213 NPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLKA 272
+ R+ + R+++G + + PG++HSF MT++YV++ E P + +LL
Sbjct: 112 KSTSQIYRVSHHSKTRELLGSIPVK---EPGYMHSFGMTQNYVILAEYPFFVNPLNLLLN 168
Query: 273 EPSALYQFEWRPERKAFLHVVCKASGKIAASVEVPLYMVFHFINAYEEKDKDGRVIAVIA 332
+ F W+P + +++ + +GK + + + FH +NA+EE DK VI
Sbjct: 169 GNPFIENFNWKPNKGTHFYLLDRKTGKFQ-NYKTESFFAFHHVNAFEENDK------VIV 221
Query: 333 DCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTI 371
D + +T II++L L L ++++ + R+ I
Sbjct: 222 DIIAY-PNTDIIQSLYLDVLHGETNKNIVSAGELRRYEI 259
>MGI|MGI:98001 [details] [associations]
symbol:Rpe65 "retinal pigment epithelium 65" species:10090
"Mus musculus" [GO:0004744 "retinal isomerase activity"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IMP] [GO:0007601 "visual perception" evidence=IMP]
[GO:0008286 "insulin receptor signaling pathway" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0042574 "retinal metabolic process" evidence=IMP]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0071257 "cellular response to electrical stimulus"
evidence=IMP] MGI:MGI:98001 GO:GO:0005783 GO:GO:0005886
GO:GO:0008286 GO:GO:0046872 GO:GO:0007601 GO:GO:0042574
eggNOG:COG3670 HOGENOM:HOG000232156 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090
GO:GO:0007468 GO:GO:0071257 GO:GO:0060042 GO:GO:0004744
OrthoDB:EOG47M1XK GO:GO:0052885 GO:GO:0052884 EMBL:AF410461
EMBL:AC163272 EMBL:AH011240 IPI:IPI00131304 UniGene:Mm.131708
ProteinModelPortal:Q91ZQ5 SMR:Q91ZQ5 STRING:Q91ZQ5
PhosphoSite:Q91ZQ5 PRIDE:Q91ZQ5 InParanoid:Q91ZQ5 CleanEx:MM_RPE65
Genevestigator:Q91ZQ5 GermOnline:ENSMUSG00000028174 Uniprot:Q91ZQ5
Length = 533
Score = 312 (114.9 bits), Expect = 2.2e-41, Sum P(2) = 2.2e-41
Identities = 102/352 (28%), Positives = 161/352 (45%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WL G+ LR GPG++ +G F HLFDG A+L K F K G + R I T+A
Sbjct: 30 VTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDF-KEGHVTYHRRFIRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDNA IY +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFKGVEVTDNALVNIYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPG----YLV 218
ET + I +P+TL+T+ + + + + ++HP + D + + + Y +
Sbjct: 148 ETNFITKI-NPETLETIKQVDLCNYISVNGATAHPHIESDGTVYNIGNCFGKNFTVAYNI 206
Query: 219 VRMEP-------GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
+++ P N+ +V+ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 IKIPPLKADKEDPINKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLS 266
Query: 272 AEP--SALYQ--FEWRPERKAFLHVVCKASGKIAAS-VEVPLYMVFHFINAYEEKDKDGR 326
+ A Y FE +LHV K K + + +FH IN YE+ +G
Sbjct: 267 SWSLWGANYMDCFESNESMGVWLHVADKKRRKYFNNKYRTSPFNLFHHINTYED---NGF 323
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDV------LPDARVGRFTIP 372
+I + CC + + L L NLR + ++V P V R+ +P
Sbjct: 324 LIVDL--CCWKGFEF-VYNYLYLANLRE-NWEEVKRNAMKAPQPEVRRYVLP 371
Score = 190 (71.9 bits), Expect = 2.2e-41, Sum P(2) = 2.2e-41
Identities = 41/103 (39%), Positives = 59/103 (57%)
Query: 405 GKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGV 464
GK Y YAY +G P+ L KL++ ++ W E PSEP+FV++P A +EDDGV
Sbjct: 428 GKPYTYAYGLGLNH--FVPDKLCKLNVKTKEIWMWQEPDSYPSEPIFVSQPDALEEDDGV 485
Query: 465 VISMISEKNGG---AYVVLLDGSTFEEIARARFPFGLPYGFHG 504
V+S++ G AY+++L+ EIARA +P FHG
Sbjct: 486 VLSVVVSPGAGQKPAYLLVLNAKDLSEIARAEVETNIPVTFHG 528
>ZFIN|ZDB-GENE-040426-1717 [details] [associations]
symbol:rpe65a "retinal pigment epithelium-specific
protein 65a" species:7955 "Danio rerio" [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
ZFIN:ZDB-GENE-040426-1717 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0007601 GO:GO:0050896 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:AY646886 EMBL:FP102801 EMBL:BC059559
IPI:IPI00485811 RefSeq:NP_957045.1 UniGene:Dr.12451
ProteinModelPortal:Q6PBW5 STRING:Q6PBW5 Ensembl:ENSDART00000004533
GeneID:393724 KEGG:dre:393724 CTD:393724 InParanoid:Q6PBW5
OMA:TSMEFPR OrthoDB:EOG47M1XK NextBio:20814725 Bgee:Q6PBW5
GO:GO:0052885 GO:GO:0052884 Uniprot:Q6PBW5
Length = 531
Score = 307 (113.1 bits), Expect = 1.8e-38, Sum P(2) = 1.8e-38
Identities = 100/353 (28%), Positives = 159/353 (45%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IPS++ G+ LR GPG++ G F HLFDG A++ K F NG++ + ++T+A
Sbjct: 30 VTGRIPSFIKGSLLRLGPGLFEAGAEPFYHLFDGQALMHKFDFS-NGQVTYFRKFVKTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDN +Y +G+ +T
Sbjct: 89 YVRAITEKRVVITEFGTCAYPDPCKNIFSRFFSYFKGVEVTDNCLVNVYPIGED-FYAVT 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPG----YLV 218
ET + V+ DTL+TL K + + + ++HP + D + + + + G Y +
Sbjct: 148 ETNYITK-VNVDTLETLKKVDMCNYVNINGVTAHPHIERDGTVYNIGNCMGKGASLAYNI 206
Query: 219 VRMEPGTNER-------KVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
VR+ P ++ KV+ + P +VHSF MTE+Y V E P++ ++ L
Sbjct: 207 VRIPPTQKDKSDPIEKSKVVVQFPSAERFKPSYVHSFGMTENYFVFVETPVKINLLKFLS 266
Query: 272 AEP--SALYQ--FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
A + Y FE E+ ++H+ K G+ I +FH IN YE+
Sbjct: 267 AWSIRGSNYMDCFESDEEKGTWIHIARKHPGEYIDYKFRTSAMGLFHHINCYEDSG---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSF-----HGQDVLPDARVGRFTIPFD 374
++ D C + L L NLR+ + P V R+ IP D
Sbjct: 323 --FIVFDLCAWKGFEFVYNYLWLANLRANWEEVKRNAMIAPQPEVRRYVIPLD 373
Score = 168 (64.2 bits), Expect = 1.8e-38, Sum P(2) = 1.8e-38
Identities = 37/106 (34%), Positives = 54/106 (50%)
Query: 405 GKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGV 464
GK Y YAY +G P+ + KL++ ++ W E PSEPLFV P DEDDG+
Sbjct: 428 GKNYTYAYGLGLNH--FVPDRICKLNVRTKETWVWQEPDSYPSEPLFVQTPDGVDEDDGI 485
Query: 465 VISMISEKNGG--AYVVLLDGSTFEEIARARFPFGLPYGFHGCWVP 508
+++++ Y ++L+ EIARA P FHG + P
Sbjct: 486 LMTIVVSPGAQRPTYCLILNAKDLSEIARAEVEILTPVTFHGMYKP 531
>MGI|MGI:1926923 [details] [associations]
symbol:Bcmo1 "beta-carotene 15,15'-monooxygenase"
species:10090 "Mus musculus" [GO:0001523 "retinoid metabolic
process" evidence=ISO;IDA] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=ISO;ISS;IDA] [GO:0004497
"monooxygenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=ISO;ISS;IDA] UniPathway:UPA00912 MGI:MGI:1926923
GO:GO:0046872 GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630
eggNOG:COG3670 GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 KO:K00515 OMA:ITENYIV OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AJ278064 EMBL:AF271298 EMBL:AF294899 EMBL:AY114302
EMBL:AY114294 EMBL:AY114295 EMBL:AY114296 EMBL:AY114297
EMBL:AY114298 EMBL:AY114299 EMBL:AY114300 EMBL:AY114301
EMBL:AK054171 IPI:IPI00122199 RefSeq:NP_067461.2 UniGene:Mm.174133
ProteinModelPortal:Q9JJS6 SMR:Q9JJS6 STRING:Q9JJS6
PhosphoSite:Q9JJS6 PRIDE:Q9JJS6 Ensembl:ENSMUST00000034308
GeneID:63857 KEGG:mmu:63857 InParanoid:Q9JJS6 BRENDA:1.14.99.36
NextBio:319783 Bgee:Q9JJS6 CleanEx:MM_BCMO1 Genevestigator:Q9JJS6
GermOnline:ENSMUSG00000031845 Uniprot:Q9JJS6
Length = 566
Score = 237 (88.5 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 73/245 (29%), Positives = 114/245 (46%)
Query: 285 ERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKD---------KDGRVIAVIADC 334
E K ++H++ + + K + +VFH +NAYEE +D + +
Sbjct: 279 EDKTYIHIIDQRTRKPVPTKFYTDPMVVFHHVNAYEEDGCVLFDVIAYEDSSLYQLFY-L 337
Query: 335 CEHNADTTIIETL-SLKNLRSFHGQ-DVLPDARVGRFTIPFDGSQFGKLE-----TVMDP 387
N D L S+ LR F V DA VG + + L+ P
Sbjct: 338 ANLNKDFEEKSRLTSVPTLRRFAVPLHVDKDAEVGSNLVKVSSTTATALKEKDGHVYCQP 397
Query: 388 EEHGRGVDMCSINPAYLGKKYRYAYAIGAK-RPCNFPNSLTKLDLVKQKAKNWCEEGIVP 446
E G+++ IN AY GK YRY +A + P P + K D++ + + W EE P
Sbjct: 398 EVLYEGLELPRINYAYNGKPYRYIFAAEVQWSPV--PTKILKYDILTKSSLKWSEESCWP 455
Query: 447 SEPLFVARPGATDEDDGVVISMI--SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFHG 504
+EPLFV PGA DEDDGV++S I ++ ++++LD +F E+ARA + HG
Sbjct: 456 AEPLFVPTPGAKDEDDGVILSAIVSTDPQKLPFLLILDAKSFTELARASVDADMHLDLHG 515
Query: 505 CWVPE 509
++P+
Sbjct: 516 LFIPD 520
Score = 233 (87.1 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 74/258 (28%), Positives = 118/258 (45%)
Query: 33 KQERWEG-ELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRL 91
K+E+ E + V G IP+WL GT LRNGPG+ +GE + H FDG A+L ++G +
Sbjct: 9 KKEQLEPVQAKVTGSIPAWLQGTLLRNGPGMHTVGESKYNHWFDGLALLHSFSI-RDGEV 67
Query: 92 IAGHRQIETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGA--SLTDNANNG 149
+ ++++ Y A + ++ EF PD + S TDN
Sbjct: 68 FYRSKYLQSDTYIANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLIN 127
Query: 150 IYKLGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTD-DEFLTLL 208
I K G+ TET I DP TL+TL K +Y + + +SHP + L +
Sbjct: 128 IMKCGED-FYATTETNYIRKI-DPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMG 185
Query: 209 PDLLNPG---YLVVRMEPGTNERKVIGR-------VNC----RGGPAPGWVHSFTMTEHY 254
+++ G Y++ ++ + K G+ V C R +P + HSF +TE+Y
Sbjct: 186 TSVVDKGRTKYVIFKIPATVPDSKKKGKSPVKHAEVFCSISSRSLLSPSYYHSFGVTENY 245
Query: 255 VVVPEMPLQYSVQSLLKA 272
VV E P + + + A
Sbjct: 246 VVFLEQPFKLDILKMATA 263
>RGD|70981 [details] [associations]
symbol:Bcmo1 "beta-carotene 15,15'-monooxygenase 1" species:10116
"Rattus norvegicus" [GO:0001523 "retinoid metabolic process"
evidence=IEA;ISO;IDA] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=IEA;ISO;IDA] [GO:0004497
"monooxygenase activity" evidence=IEA] [GO:0042572 "retinol
metabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=ISO] UniPathway:UPA00912 RGD:70981 GO:GO:0046872
GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AB062912 IPI:IPI00208162 RefSeq:NP_446100.1 UniGene:Rn.126587
STRING:Q91XT5 PRIDE:Q91XT5 GeneID:114106 KEGG:rno:114106
UCSC:RGD:70981 InParanoid:Q91XT5 NextBio:618281
Genevestigator:Q91XT5 GermOnline:ENSRNOG00000012027 Uniprot:Q91XT5
Length = 566
Score = 234 (87.4 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 73/245 (29%), Positives = 115/245 (46%)
Query: 285 ERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKD---------KDGRVIAVIADC 334
E K ++H++ + + K + +VFH +NAYEE +D + +
Sbjct: 279 EDKTYIHIIDQKTRKPVPTKFYTDPMVVFHHVNAYEEDGCVLFDVIAYEDNSLYQLFY-L 337
Query: 335 CEHNADTTIIETL-SLKNLRSFHGQ-DVLPDARVGRFTIPFDGSQFGKLETVMD-----P 387
N D L S+ LR F V DA VG + + L+ D P
Sbjct: 338 ANLNKDFEEKSRLTSVPTLRRFAVPLHVDKDAEVGSNLVKVSSTTATALKEKDDHVYCQP 397
Query: 388 EEHGRGVDMCSINPAYLGKKYRYAYAIGAK-RPCNFPNSLTKLDLVKQKAKNWCEEGIVP 446
E G+++ IN A+ GK YRY +A + P P + K D++ + + W EE P
Sbjct: 398 EVLYEGLELPRINYAHNGKPYRYIFAAEVQWSPV--PTKILKYDVLTKSSLKWSEESCWP 455
Query: 447 SEPLFVARPGATDEDDGVVISMI--SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFHG 504
+EPLFV PGA DEDDGV++S I ++ ++++LD +F E+ARA + HG
Sbjct: 456 AEPLFVPTPGAKDEDDGVILSAIISTDPQKLPFLLILDAKSFTELARASVDVDMHLDLHG 515
Query: 505 CWVPE 509
++P+
Sbjct: 516 LFIPD 520
Score = 234 (87.4 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 72/258 (27%), Positives = 118/258 (45%)
Query: 33 KQERWEG-ELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRL 91
K+E+ E V G IP+WL GT LRNGPG+ +G+ + H FDG A+L ++G +
Sbjct: 9 KKEQLEPLRATVTGSIPAWLQGTLLRNGPGMHTVGDSKYNHWFDGLALLHSFSI-RDGEV 67
Query: 92 IAGHRQIETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGA--SLTDNANNG 149
+ ++++ Y A + ++ EF PD + S TDN
Sbjct: 68 FYRSKYLQSDTYNANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLIN 127
Query: 150 IYKLGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTD-DEFLTLL 208
I K G+ TET I DP TL+TL K +Y + + +SHP + L +
Sbjct: 128 IMKCGED-FYATTETNYIRKI-DPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMG 185
Query: 209 PDLLNPG---YLVVRME---PGTNER--------KVIGRVNCRGGPAPGWVHSFTMTEHY 254
+ + G Y++ ++ PG+ ++ +V + R +P + HSF +TE+Y
Sbjct: 186 TSIADKGGTKYVMFKIPATAPGSKKKGKNPLKHSEVFCSIPSRSLLSPSYYHSFGVTENY 245
Query: 255 VVVPEMPLQYSVQSLLKA 272
VV E P + + + A
Sbjct: 246 VVFLEQPFKLDILKMATA 263
>UNIPROTKB|Q91XT5 [details] [associations]
symbol:Bcmo1 "Beta,beta-carotene 15,15'-monooxygenase"
species:10116 "Rattus norvegicus" [GO:0004497 "monooxygenase
activity" evidence=IEA] UniPathway:UPA00912 RGD:70981 GO:GO:0046872
GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AB062912 IPI:IPI00208162 RefSeq:NP_446100.1 UniGene:Rn.126587
STRING:Q91XT5 PRIDE:Q91XT5 GeneID:114106 KEGG:rno:114106
UCSC:RGD:70981 InParanoid:Q91XT5 NextBio:618281
Genevestigator:Q91XT5 GermOnline:ENSRNOG00000012027 Uniprot:Q91XT5
Length = 566
Score = 234 (87.4 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 73/245 (29%), Positives = 115/245 (46%)
Query: 285 ERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKD---------KDGRVIAVIADC 334
E K ++H++ + + K + +VFH +NAYEE +D + +
Sbjct: 279 EDKTYIHIIDQKTRKPVPTKFYTDPMVVFHHVNAYEEDGCVLFDVIAYEDNSLYQLFY-L 337
Query: 335 CEHNADTTIIETL-SLKNLRSFHGQ-DVLPDARVGRFTIPFDGSQFGKLETVMD-----P 387
N D L S+ LR F V DA VG + + L+ D P
Sbjct: 338 ANLNKDFEEKSRLTSVPTLRRFAVPLHVDKDAEVGSNLVKVSSTTATALKEKDDHVYCQP 397
Query: 388 EEHGRGVDMCSINPAYLGKKYRYAYAIGAK-RPCNFPNSLTKLDLVKQKAKNWCEEGIVP 446
E G+++ IN A+ GK YRY +A + P P + K D++ + + W EE P
Sbjct: 398 EVLYEGLELPRINYAHNGKPYRYIFAAEVQWSPV--PTKILKYDVLTKSSLKWSEESCWP 455
Query: 447 SEPLFVARPGATDEDDGVVISMI--SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFHG 504
+EPLFV PGA DEDDGV++S I ++ ++++LD +F E+ARA + HG
Sbjct: 456 AEPLFVPTPGAKDEDDGVILSAIISTDPQKLPFLLILDAKSFTELARASVDVDMHLDLHG 515
Query: 505 CWVPE 509
++P+
Sbjct: 516 LFIPD 520
Score = 234 (87.4 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 72/258 (27%), Positives = 118/258 (45%)
Query: 33 KQERWEG-ELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRL 91
K+E+ E V G IP+WL GT LRNGPG+ +G+ + H FDG A+L ++G +
Sbjct: 9 KKEQLEPLRATVTGSIPAWLQGTLLRNGPGMHTVGDSKYNHWFDGLALLHSFSI-RDGEV 67
Query: 92 IAGHRQIETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGA--SLTDNANNG 149
+ ++++ Y A + ++ EF PD + S TDN
Sbjct: 68 FYRSKYLQSDTYNANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLIN 127
Query: 150 IYKLGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTD-DEFLTLL 208
I K G+ TET I DP TL+TL K +Y + + +SHP + L +
Sbjct: 128 IMKCGED-FYATTETNYIRKI-DPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMG 185
Query: 209 PDLLNPG---YLVVRME---PGTNER--------KVIGRVNCRGGPAPGWVHSFTMTEHY 254
+ + G Y++ ++ PG+ ++ +V + R +P + HSF +TE+Y
Sbjct: 186 TSIADKGGTKYVMFKIPATAPGSKKKGKNPLKHSEVFCSIPSRSLLSPSYYHSFGVTENY 245
Query: 255 VVVPEMPLQYSVQSLLKA 272
VV E P + + + A
Sbjct: 246 VVFLEQPFKLDILKMATA 263
>UNIPROTKB|F1N2Z9 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121 EMBL:DAAA02040291
EMBL:DAAA02040290 IPI:IPI00729522 Ensembl:ENSBTAT00000048395
OMA:ICSIASE Uniprot:F1N2Z9
Length = 530
Score = 284 (105.0 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 93/325 (28%), Positives = 148/325 (45%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V+G P WL+G LR GPG + G+ + H FDG A+L + EK G + + ++++
Sbjct: 50 VQGHFPEWLSGYLLRVGPGKFEFGKDKYNHWFDGMALLHQFKVEK-GTVTYRSKFLQSDT 108
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
YKA ++ EF PD F ++TDN N Y L G T
Sbjct: 109 YKANSDRDRIVISEFGTLALPDPCKNVFERFMSKFEKPAITDNTNVN-YVLYKGDYYLST 167
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP-G--YLVV 219
ET + VD +TL+ K ++ + ++HP D + + G Y V+
Sbjct: 168 ETNFMNK-VDIETLEKTEKVNWTKFIAVNGATAHPHYDPDGTTYNMGNSYGKHGSCYNVI 226
Query: 220 RMEPGTNE-------RKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLL-- 270
R+ P ++ +VI + G P + HSF MT +Y++ E PL+ ++ ++
Sbjct: 227 RVPPEKSDPGETIHGAQVICSIASEEGMRPSYYHSFGMTRNYIIFIEQPLKINLWRIISS 286
Query: 271 KAEPSALYQ-FEWRPERKAFLHVVCKASGKIAASVEVPL-YMVFHFINAYEEKDKDGRVI 328
K A W P+ HVV K +G++ + ++ FH INA+E++ G V
Sbjct: 287 KIRGKAFSDGISWEPQYNTRFHVVDKHTGQLLPGMYFSKPFVTFHQINAFEDQ---GCV- 342
Query: 329 AVIADCCEHNADTTIIETLSLKNLR 353
VI CC+ D I+E L+NLR
Sbjct: 343 -VIDLCCQD--DGGILEVYQLQNLR 364
Score = 169 (64.5 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 47/155 (30%), Positives = 79/155 (50%)
Query: 323 KDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTIP-FDGSQFGKL 381
K G+ + + + N+ + L L NL + G+++ P + DG +
Sbjct: 365 KTGKELDQVYNLIARNSPRRFVLPL-LGNLNAPEGENLSPLTYSSASAVKQADGKIWCSY 423
Query: 382 ETVM--DPEEHGRGVDMCSINPA-YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKN 438
E + D +E G ++ IN + GKKY++ Y G + +SL K+D+V + +
Sbjct: 424 ENLYPEDLKEEG-SIEFPQINYGQFNGKKYQFFYGCGFRHLVG--DSLIKVDVVNKTRRV 480
Query: 439 WCEEGIVPSEPLFVARPGATDEDDGVVISMISEKN 473
W E+G PSEP+FV PGA+ EDDGV++S++ N
Sbjct: 481 WREDGFYPSEPVFVPVPGASKEDDGVILSVVITPN 515
>ZFIN|ZDB-GENE-040426-1191 [details] [associations]
symbol:bcmo1b "beta-carotene 15,15'-monooxygenase
1b" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-040426-1191 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:BC056789 IPI:IPI00503910
RefSeq:NP_956902.1 UniGene:Dr.84019 ProteinModelPortal:Q6PGY1
STRING:Q6PGY1 GeneID:393580 KEGG:dre:393580 CTD:393580
InParanoid:Q6PGY1 NextBio:20814600 Uniprot:Q6PGY1
Length = 525
Score = 235 (87.8 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 82/307 (26%), Positives = 135/307 (43%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WL GT LRNGPG++ +G ++ H FDG A++ F K+G + + +++E
Sbjct: 20 VSGSIPPWLQGTLLRNGPGLFSVGNTSYKHWFDGMALIHSFTF-KDGEVFYRSKYLKSET 78
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGA--SLTDNANNGIYKLGDGRIIC 160
YK ++ EF PD A TDN I K G+
Sbjct: 79 YKKNIAADRIVVSEFGTMVYPDPCKNIFSRAFSYMMNAIPDFTDNNLINIIKYGED-YYA 137
Query: 161 LTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDD----EFLTLLPDLLNPGY 216
+E + I DP TL+TLG+ Y + + + ++HP ++ T + +L P Y
Sbjct: 138 SSEVNYINQI-DPLTLETLGRTNYRNHIAINLATAHPHYDEEGNTYNMGTAIMNLGRPKY 196
Query: 217 LVVRMEPGT----NERKVIGRVN--C----RGGPAPGWVHSFTMTEHYVVVPEMPLQYSV 266
++ ++ T N++ + V C R P + HSF MTE+Y++ E + +
Sbjct: 197 VIFKVPANTSDKENKKPALSEVEQVCSIPIRPSLYPSYFHSFGMTENYIIFVEQAFKLDI 256
Query: 267 QSLLKAEPSALYQ---FEWRPERKAFLHVVCKASGKIAASVEVPLYMVFHFINAYEEK-- 321
L A + ++ + H+V K +GK A SV+ Y F+ +
Sbjct: 257 VKLATAYFRDINWGSCLKFDQDDINVFHLVNKKTGK-AVSVK---YYTDPFVTFHHINAY 312
Query: 322 DKDGRVI 328
+ DG V+
Sbjct: 313 EDDGHVV 319
Score = 210 (79.0 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 45/119 (37%), Positives = 70/119 (58%)
Query: 392 RGVDMCSINPAYLGKKYRYAYAIGAK-RPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPL 450
+G+++ +IN + KK RY Y + P +PN + K+D+V + K W EE PSEP+
Sbjct: 404 KGLELPAINYKFNSKKNRYFYGTRVEWSP--YPNKVAKVDVVTRTHKIWTEEECYPSEPV 461
Query: 451 FVARPGATDEDDGVVISMISEKNGGA--YVVLLDGSTFEEIARARFPFGLPYGFHGCWV 507
F+A P A DEDDGV++S + N ++V+LD +F+EIARA + HG ++
Sbjct: 462 FIASPDAVDEDDGVILSSVVSFNPQRPPFLVVLDAKSFKEIARATIDASIHMDLHGLFI 520
>UNIPROTKB|Q9HAY6 [details] [associations]
symbol:BCMO1 "Beta,beta-carotene 15,15'-monooxygenase"
species:9606 "Homo sapiens" [GO:0004497 "monooxygenase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042572 "retinol metabolic process" evidence=IEA] [GO:0001523
"retinoid metabolic process" evidence=IDA;TAS] [GO:0003834
"beta-carotene 15,15'-monooxygenase activity" evidence=IDA;TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0008202 "steroid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0035238 "vitamin A biosynthetic process"
evidence=NAS] [GO:0042574 "retinal metabolic process" evidence=NAS]
Reactome:REACT_111217 UniPathway:UPA00912 GO:GO:0005829
GO:GO:0008202 GO:GO:0046872 GO:GO:0004497 EMBL:CH471114
GO:GO:0042572 GO:GO:0042574 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OMA:ITENYIV
OrthoDB:EOG4G7BZ5 GO:GO:0003834 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:AF294900 EMBL:AK001592
EMBL:BC126210 EMBL:BC126212 IPI:IPI00307216 RefSeq:NP_059125.2
UniGene:Hs.212172 ProteinModelPortal:Q9HAY6 SMR:Q9HAY6
IntAct:Q9HAY6 STRING:Q9HAY6 PhosphoSite:Q9HAY6 DMDM:41688803
PRIDE:Q9HAY6 DNASU:53630 Ensembl:ENST00000258168 GeneID:53630
KEGG:hsa:53630 UCSC:uc002fgn.1 GeneCards:GC16P081272
HGNC:HGNC:13815 HPA:HPA043811 MIM:115300 MIM:605748
neXtProt:NX_Q9HAY6 Orphanet:199285 PharmGKB:PA37812
InParanoid:Q9HAY6 PhylomeDB:Q9HAY6 BioCyc:MetaCyc:HS06050-MONOMER
ChiTaRS:BCMO1 GenomeRNAi:53630 NextBio:56108 ArrayExpress:Q9HAY6
Bgee:Q9HAY6 CleanEx:HS_BCMO1 Genevestigator:Q9HAY6
GermOnline:ENSG00000135697 GO:GO:0035238 Uniprot:Q9HAY6
Length = 547
Score = 224 (83.9 bits), Expect = 7.0e-34, Sum P(2) = 7.0e-34
Identities = 69/245 (28%), Positives = 115/245 (46%)
Query: 285 ERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKD---------KDGRVIAVIADC 334
E K ++H++ + + + + +VFH +NAYEE +D + +
Sbjct: 279 EEKTYIHIIDQRTRQPVQTKFYTDAMVVFHHVNAYEEDGCIVFDVIAYEDNSLYQLFY-L 337
Query: 335 CEHNADTTIIETL-SLKNLRSFHGQ-DVLPDARVGRFTIPFDGSQFGKL-----ETVMDP 387
N D L S+ LR F V +A VG I + L + P
Sbjct: 338 ANLNQDFKENSRLTSVPTLRRFAVPLHVDKNAEVGTNLIKVASTTATALKEEDGQVYCQP 397
Query: 388 EEHGRGVDMCSINPAYLGKKYRYAYAIGAK-RPCNFPNSLTKLDLVKQKAKNWCEEGIVP 446
E G+++ +N A+ GK+YRY +A G + P P + K D++ + + W E+ P
Sbjct: 398 EFLYEGLELPRVNYAHNGKQYRYVFATGVQWSP--IPTKIIKYDILTKSSLKWREDDCWP 455
Query: 447 SEPLFVARPGATDEDDGVVISMI--SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFHG 504
+EPLFV PGA DEDDGV++S I ++ ++++LD +F E+ARA + HG
Sbjct: 456 AEPLFVPAPGAKDEDDGVILSAIVSTDPQKLPFLLILDAKSFTELARASVDVDMHMDLHG 515
Query: 505 CWVPE 509
++ +
Sbjct: 516 LFITD 520
Score = 220 (82.5 bits), Expect = 7.0e-34, Sum P(2) = 7.0e-34
Identities = 70/257 (27%), Positives = 114/257 (44%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G+IP+WL GT LRNGPG+ +GE + H FDG A+L ++G + + + ++
Sbjct: 20 VTGKIPAWLQGTLLRNGPGMHTVGESRYNHWFDGLALLHSFTI-RDGEVYYRSKYLRSDT 78
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGA--SLTDNANNGIYKLGDGRIIC 160
Y + ++ EF PD + S TDN I K G+
Sbjct: 79 YNTNIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLINIMKCGED-FYA 137
Query: 161 LTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTD-DEFLTLLPDLLNPG---Y 216
+ET I +P TL+TL K +Y + + +SHP + L + ++ G Y
Sbjct: 138 TSETNYIRKI-NPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGTSIVEKGKTKY 196
Query: 217 LVVRMEPGTNERKVIGR-------VNC----RGGPAPGWVHSFTMTEHYVVVPEMPLQYS 265
++ ++ E K G+ V C R +P + HSF +TE+YV+ E P +
Sbjct: 197 VIFKIPATVPEGKKQGKSPWKHTEVFCSIPSRSLLSPSYYHSFGVTENYVIFLEQPFRLD 256
Query: 266 VQSLLKAEPSALYQFEW 282
+ LK + + + W
Sbjct: 257 I---LKMATAYIRRMSW 270
>WB|WBGene00018755 [details] [associations]
symbol:bcmo-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
GO:GO:0040010 eggNOG:COG3670 GeneTree:ENSGT00500000044783
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:FO080905
RefSeq:NP_494694.2 ProteinModelPortal:Q9TXT9 PaxDb:Q9TXT9
EnsemblMetazoa:F53C3.12 GeneID:173733 KEGG:cel:CELE_F53C3.12
CTD:173733 WormBase:F53C3.12 HOGENOM:HOG000153586 InParanoid:Q9TXT9
OMA:MEAQRIV NextBio:880851 Uniprot:Q9TXT9
Length = 530
Score = 301 (111.0 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 94/359 (26%), Positives = 167/359 (46%)
Query: 45 GEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEAYK 104
G +PS+L GT LRNGPG++ IG+ + H FDG + + HFE +G++ R +E+E YK
Sbjct: 26 GSVPSYLKGTMLRNGPGMFEIGDTKYQHWFDGMGFIQRYHFE-DGKMYYSARYLESENYK 84
Query: 105 AAKKNKKLCYREFSVSPKPDNFLAYVGELAKLF-SGASLTDNANNGIYKLGDGRIICLTE 163
+ +++ F + PD + F + DNAN +GDG C TE
Sbjct: 85 KNMEAQRIVTGSFGTASFPDPCKSIFSRFFSSFVQSEGIHDNANVAFAPVGDGLYAC-TE 143
Query: 164 TQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLL-----PDLL------ 212
T VD D+LDTL ++S + ++H + ++ + + PD
Sbjct: 144 TPNMHR-VDLDSLDTLEPVDFSKYVALHTCTAHQLFDENGDVYNIGSRFGPDAAHVFTVT 202
Query: 213 -NPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQS-LL 270
NP L + IG + C P ++HSF M+E+Y+++ E P++ ++ ++
Sbjct: 203 KNPKNLQSDSDRSWEHTTKIGEIRCSETFYPTYMHSFGMSENYLIMFESPIRIDIKKFIM 262
Query: 271 KAEPSALYQ--FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGRV 327
K + ++ +W ++ + ++ K +G+ + +++ + FH N +E +DG
Sbjct: 263 KRFITTTFRDCMKWHADKDVKIFILNKKTGEQVPLKLKMAPFFTFHHANTFE---RDG-- 317
Query: 328 IAVIADCCE----HNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTIPF---DGSQFG 379
++ D C N D +IE + N ++ D L + R IP DG+Q G
Sbjct: 318 -CLVVDYCRIEQAGNFDALLIENMKTGNFQN----DALFLPYLTRVIIPLSIPDGAQPG 371
Score = 128 (50.1 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 35/106 (33%), Positives = 50/106 (47%)
Query: 406 KKYRYAYA---IGAKRPCNFPNSLTKLDLVKQKAKNWCEEGI--VPSEPLFVARPGATDE 460
K Y Y Y +GA++ P + K DL K W E + EP+FV P E
Sbjct: 419 KPYNYVYGSSVLGAQKSETLPG-IVKADLENGDHKVWRRENDKQICGEPIFVPNPEGVRE 477
Query: 461 DDGVVISMISEKNGGA--YVVLLDGSTFEEIARARFPFG-LPYGFH 503
DDG++I + + G +V++L+ EIAR P +P GFH
Sbjct: 478 DDGILIVPVMTISDGQRPFVLILEAKNLTEIARYTIPEARIPLGFH 523
>UNIPROTKB|E9PJJ1 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IEA] InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AP002884 HGNC:HGNC:18503 ChiTaRS:BCO2 IPI:IPI00985076
ProteinModelPortal:E9PJJ1 SMR:E9PJJ1 Ensembl:ENST00000532593
ArrayExpress:E9PJJ1 Bgee:E9PJJ1 Uniprot:E9PJJ1
Length = 474
Score = 244 (91.0 bits), Expect = 4.3e-33, Sum P(2) = 4.3e-33
Identities = 49/126 (38%), Positives = 75/126 (59%)
Query: 386 DPEEHGRGVDMCSIN-PAYLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGI 444
D E+ G G++ I + GKKY + Y G + +SL K+D+V + K W E+G
Sbjct: 351 DLEKEG-GIEFPQIYYDRFSGKKYHFFYGCGFRHLVG--DSLIKVDVVNKTLKVWREDGF 407
Query: 445 VPSEPLFVARPGATDEDDGVVISMI--SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGF 502
PSEP+FV PG +ED GV++S++ +N ++++LD FEE+ RA P +PYGF
Sbjct: 408 YPSEPVFVPAPGTNEEDGGVILSVVITPNQNESNFILVLDAKNFEELGRAEVPVQMPYGF 467
Query: 503 HGCWVP 508
HG ++P
Sbjct: 468 HGTFIP 473
Score = 187 (70.9 bits), Expect = 4.3e-33, Sum P(2) = 4.3e-33
Identities = 86/324 (26%), Positives = 143/324 (44%)
Query: 78 AMLVKVHFEKNGRLIAGHRQIETEAYKAAKKNKKLCYREFSVSPKPD---N-FLAYVGEL 133
A+L + K G + + ++++ YKA ++ EF PD N F ++
Sbjct: 2 ALLHQFRMAK-GTVTYRSKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERFMSRF 60
Query: 134 AKLFSGASLTDNAN-NGIYKLGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFI 192
A++TDN N N + GD +C TET + VD +TL+ K ++S +
Sbjct: 61 ELPGKAAAMTDNTNVNYVRYKGD-YYLC-TETNFMNK-VDIETLEKTEKVDWSKFIAVNG 117
Query: 193 QSSHPIVTDDEFLTLLPDLLNP---GYLVVRMEPGTNE--RKVIG-RVNCRGGPA----P 242
++HP D + + P Y V+R+ P + + G +V C P
Sbjct: 118 ATAHPHYDLDGTAYNMGNSFGPYGFSYKVIRVPPEKVDLGETIHGVQVICSIASTEKGKP 177
Query: 243 GWVHSFTMTEHYVVVPEMPLQYSVQSLL--KAEPSALYQ-FEWRPERKAFLHVVCKASGK 299
+ HSF MT +Y++ E PL+ ++ + K A W P+ HVV K +G+
Sbjct: 178 SYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVEKRTGQ 237
Query: 300 IAAS--VEVPLYMVFHFINAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSF-H 356
+ P ++ FH INA+E++ G VI + CC+ N T +E L+NLR
Sbjct: 238 LLPGRYYSKP-FVTFHQINAFEDQ---GCVIIDL--CCQDNGRT--LEVYQLQNLRKAGE 289
Query: 357 GQDVLPDARVG----RFTIPFDGS 376
G D + ++ RF +P + S
Sbjct: 290 GLDQVHNSAAKSFPRRFVLPLNVS 313
>WB|WBGene00012914 [details] [associations]
symbol:bcmo-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
GO:GO:0040010 eggNOG:COG3670 GeneTree:ENSGT00500000044783
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AL110485
OMA:TSMEFPR HOGENOM:HOG000153586 RefSeq:NP_496729.2
UniGene:Cel.14051 ProteinModelPortal:Q9U2E4 SMR:Q9U2E4
DIP:DIP-26226N IntAct:Q9U2E4 MINT:MINT-1067701 PaxDb:Q9U2E4
EnsemblMetazoa:Y46G5A.24 GeneID:189959 KEGG:cel:CELE_Y46G5A.24
UCSC:Y46G5A.24 CTD:189959 WormBase:Y46G5A.24 InParanoid:Q9U2E4
NextBio:944184 Uniprot:Q9U2E4
Length = 529
Score = 281 (104.0 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 87/328 (26%), Positives = 154/328 (46%)
Query: 45 GEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEAYK 104
G +PS+L GT LRNGPG++ +GE + H FDG + + HFE +G++ R +E+EAY
Sbjct: 26 GSVPSYLTGTMLRNGPGMFTVGEEEYKHWFDGLGFMQRYHFE-DGKMFYSARYLESEAYT 84
Query: 105 AAKKNKKLCYREFSVSPKPDNFLAYVGE-LAKLFSGASLTDNANNGIYKLGDGRIICLTE 163
+ +++ F PD + ++ + + DN+N +GD C TE
Sbjct: 85 KTVEAQRIVAGTFGTLSFPDPCKTIFSKYFSEFMNHSEKHDNSNVAFTPVGDSLYAC-TE 143
Query: 164 TQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPG---YLVVR 220
T VD DTL TL ++S + ++H + ++ + + P V
Sbjct: 144 TPH-MYRVDLDTLKTLEAADFSKFVAVHSCTAHQLYDENGDVYNIGSRFGPESAHVFTVT 202
Query: 221 MEP----GTNERK-----VIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
P N+ IG + P ++HSF M+E+Y+V+ E P++ +Q L
Sbjct: 203 KNPKNQKSENDHSWEHTSKIGEIKASDPLYPTYMHSFGMSENYLVMFESPVRLHLQKYLL 262
Query: 272 AE-PSALYQ--FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGRV 327
+E A Y EW ++ + ++ K +G+ + ++++ + FH N +E KDG
Sbjct: 263 SEFVRATYHDCLEWHGDKDVSIFILNKKTGEQLPLTLKMNPFFTFHHANTFE---KDG-- 317
Query: 328 IAVIADCCE-HNADTTIIETLSLKNLRS 354
++ D C NA +TL + N+++
Sbjct: 318 -CLVMDYCRIENAGK--FDTLLISNMKT 342
Score = 133 (51.9 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 37/112 (33%), Positives = 54/112 (48%)
Query: 406 KKYRYAYA--IGAKRPCNFPNSLTKLDLVKQKAKNWCEEGI--VPSEPLFVARPGATDED 461
K+YRY + + + N + K DL W E + EP+FV P +ED
Sbjct: 419 KEYRYVFGSTVFGRIDGNLAG-VVKADLKFGNHLIWNRENPHQICGEPIFVPNPEGIEED 477
Query: 462 DGVVIS--MISEKNGGAYVVLLDGSTFEEIARARFPFG-LPYGFHGCWVPEN 510
DG++I M S + +V++LD T EE AR P +P GFH + P+N
Sbjct: 478 DGILIVPIMSSSEKQVPFVLILDAKTLEETARFEIPEARIPLGFHAFYKPKN 529
>UNIPROTKB|F1P321 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0042574 "retinal metabolic process" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0071257
"cellular response to electrical stimulus" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 IPI:IPI00584895 EMBL:AADN02012423
Ensembl:ENSGALT00000018373 Uniprot:F1P321
Length = 449
Score = 204 (76.9 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 77/304 (25%), Positives = 129/304 (42%)
Query: 100 TEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRII 159
T+AY A K++ EF PD F G +TDNA +Y +G+
Sbjct: 2 TDAYVRAMTEKRIVITEFGTYAYPDPCKNIFSRFFSYFKGVEVTDNALVNVYPVGEDYYA 61
Query: 160 CLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPG---- 215
C TET + I +PDTL+T+ + + + ++HP V +D + + +
Sbjct: 62 C-TETNFITKI-NPDTLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIGNCFGKNFSLA 119
Query: 216 YLVVRMEP-------GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQS 268
Y ++R+ P N+ +V+ + C P +VHSF +T +Y+V E P++ ++
Sbjct: 120 YNIIRIPPLQADKEDPMNKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLK 179
Query: 269 LLKAEP--SALYQ--FEWRPERKAFLHVVCKASGKIA-ASVEVPLYMVFHFINAYEEKDK 323
L + A Y FE +LHV K G++ + +FH IN +E+
Sbjct: 180 FLSSWSLWGANYMDCFESNETMGVWLHVAEKKKGRLLNIKYRTSAFNLFHHINTFED--- 236
Query: 324 DGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQ-----DVLPDARVGRFTIPF--DGS 376
+G +I D C + L L NLR+ + + P R+ +P D +
Sbjct: 237 NG---FLIVDLCTWKGFEFVYNYLYLANLRANWDEVKKQAEKAPQPEARRYVLPLRIDKA 293
Query: 377 QFGK 380
GK
Sbjct: 294 DTGK 297
Score = 188 (71.2 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 40/105 (38%), Positives = 58/105 (55%)
Query: 403 YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDD 462
Y GK Y Y Y +G P+ L KL++ ++ W E PSEP+FV+ P A +EDD
Sbjct: 342 YGGKPYTYTYGLGLNH--FVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDD 399
Query: 463 GVVISMISEKNGG---AYVVLLDGSTFEEIARARFPFGLPYGFHG 504
GVV+S++ G AY+++L+ E+ARA +P FHG
Sbjct: 400 GVVLSIVISPGSGPKPAYLLILNAKDMSEVARAEVEVNIPVTFHG 444
>UNIPROTKB|F1NE28 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0042574 "retinal metabolic process" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0071257
"cellular response to electrical stimulus" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:WLHVADK EMBL:AADN02012423 IPI:IPI00821971
Ensembl:ENSGALT00000037886 Uniprot:F1NE28
Length = 458
Score = 204 (76.9 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 77/304 (25%), Positives = 129/304 (42%)
Query: 100 TEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRII 159
T+AY A K++ EF PD F G +TDNA +Y +G+
Sbjct: 11 TDAYVRAMTEKRIVITEFGTYAYPDPCKNIFSRFFSYFKGVEVTDNALVNVYPVGEDYYA 70
Query: 160 CLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPG---- 215
C TET + I +PDTL+T+ + + + ++HP V +D + + +
Sbjct: 71 C-TETNFITKI-NPDTLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIGNCFGKNFSLA 128
Query: 216 YLVVRMEP-------GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQS 268
Y ++R+ P N+ +V+ + C P +VHSF +T +Y+V E P++ ++
Sbjct: 129 YNIIRIPPLQADKEDPMNKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLK 188
Query: 269 LLKAEP--SALYQ--FEWRPERKAFLHVVCKASGKIA-ASVEVPLYMVFHFINAYEEKDK 323
L + A Y FE +LHV K G++ + +FH IN +E+
Sbjct: 189 FLSSWSLWGANYMDCFESNETMGVWLHVAEKKKGRLLNIKYRTSAFNLFHHINTFED--- 245
Query: 324 DGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQ-----DVLPDARVGRFTIPF--DGS 376
+G +I D C + L L NLR+ + + P R+ +P D +
Sbjct: 246 NG---FLIVDLCTWKGFEFVYNYLYLANLRANWDEVKKQAEKAPQPEARRYVLPLRIDKA 302
Query: 377 QFGK 380
GK
Sbjct: 303 DTGK 306
Score = 188 (71.2 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 40/105 (38%), Positives = 58/105 (55%)
Query: 403 YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDD 462
Y GK Y Y Y +G P+ L KL++ ++ W E PSEP+FV+ P A +EDD
Sbjct: 351 YGGKPYTYTYGLGLNH--FVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDD 408
Query: 463 GVVISMISEKNGG---AYVVLLDGSTFEEIARARFPFGLPYGFHG 504
GVV+S++ G AY+++L+ E+ARA +P FHG
Sbjct: 409 GVVLSIVISPGSGPKPAYLLILNAKDMSEVARAEVEVNIPVTFHG 453
>UNIPROTKB|F1N3B7 [details] [associations]
symbol:BCMO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003834 "beta-carotene 15,15'-monooxygenase activity"
evidence=IEA] [GO:0001523 "retinoid metabolic process"
evidence=IEA] GO:GO:0001523 GeneTree:ENSGT00500000044783
OMA:ITENYIV GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:DAAA02046109 EMBL:DAAA02046110 IPI:IPI00702818
Ensembl:ENSBTAT00000048748 Uniprot:F1N3B7
Length = 494
Score = 198 (74.8 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 63/249 (25%), Positives = 111/249 (44%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G+IP+WL G LRNGPG+ +GE + H FDG A+L ++G + + + ++
Sbjct: 20 VTGKIPAWLQGILLRNGPGMHTVGETRYNHWFDGLALLHSFTI-RDGEVYYRSKYLRSDT 78
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGA--SLTDNANNGIYKLGDGRIIC 160
Y A + ++ EF PD + S TDN I + G+
Sbjct: 79 YTANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLINIMRCGED-FYA 137
Query: 161 LTETQKGSVI--VDPDTLDTLGKFEYSDPLGGFIQSSHPIV-TDDEFLTLLPDLLNPG-- 215
TET S I ++P TL+TL K ++ + + +SHP L + +++ G
Sbjct: 138 TTET---SYIRRINPQTLETLEKVDFRKYVAVNLATSHPHYDAAGNVLNVGTSIVDKGKT 194
Query: 216 -YLVVRME---PG--------TNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQ 263
Y++ ++ PG + +V + +P + HSF ++E+Y++ E P +
Sbjct: 195 KYVIFKIPAPVPGGRKEGRSPLKDTEVFCSIAAHSLLSPSYYHSFGVSENYIIFLEQPFK 254
Query: 264 YSVQSLLKA 272
+ + A
Sbjct: 255 LDILKMATA 263
Score = 172 (65.6 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 62/221 (28%), Positives = 103/221 (46%)
Query: 285 ERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKD---------KDGRV-----IA 329
E K +H++ + + K + +VFH +NAYEE +DG + +A
Sbjct: 279 EDKTHIHIIDRRTRKPVPTKYHTDPMVVFHHVNAYEEDGCLLFDVITYEDGSLYQLFYLA 338
Query: 330 VIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTIPFDGSQFGKLETVMD--- 386
+ + + N+ T + TL + + H V +A VG I + L+ D
Sbjct: 339 NLNEDFKENSRLTSMPTLK-RFVLPLH---VDKNAEVGSNLIKLSSTTARALKEKDDQVY 394
Query: 387 --PEEHGRGVDMCSINPAYLGKKYRYAYAIGAK-RPCNFPNSLTKLDLVKQKAKNWCEEG 443
PE G+++ IN A+ G+ YRY +A G + P P + + + W EE
Sbjct: 395 CQPELLCEGLELPHINYAHNGQPYRYIFAAGVQWSP--IPKLFYSSIVAQWSSLTWREEH 452
Query: 444 IVPSEPLFVARPGATDEDDGVVISMI--SEKNGGAYVVLLD 482
P+EPLFV PGA DEDDG+++S I ++ ++++LD
Sbjct: 453 CWPAEPLFVPTPGAKDEDDGIILSAIVSTDPQKSPFLLVLD 493
>ASPGD|ASPL0000049803 [details] [associations]
symbol:AN1704 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] EMBL:BN001307 GO:GO:0016702 EMBL:AACD01000026
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:XP_659308.1 ProteinModelPortal:Q5BCM6
EnsemblFungi:CADANIAT00008347 GeneID:2875405 KEGG:ani:AN1704.2
HOGENOM:HOG000166169 OrthoDB:EOG4WDHM3 Uniprot:Q5BCM6
Length = 575
Score = 208 (78.3 bits), Expect = 3.9e-25, Sum P(3) = 3.9e-25
Identities = 40/122 (32%), Positives = 68/122 (55%)
Query: 390 HGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEP 449
H ++ ++NP Y+ +RY YA+ + F + + K D + + K W E P E
Sbjct: 447 HALSPELATLNPFYITHPHRYTYAVTDRGLSTFVDGIVKFDSLTGETKLWSEHAQSPGEA 506
Query: 450 LFVARPGATDEDDGVVISMISE-KNGGAYVVLLDGSTFEEIARARFPFGLPYGFHGCWVP 508
+FVA P +EDDGV++S++ + ++G +Y+++LD +EI RA + +GFHG V
Sbjct: 507 IFVADPDGKEEDDGVLLSVVLDGRSGRSYLLVLDAGNMKEIGRASVNAAVGFGFHGVHVA 566
Query: 509 EN 510
N
Sbjct: 567 GN 568
Score = 119 (46.9 bits), Expect = 3.9e-25, Sum P(3) = 3.9e-25
Identities = 54/211 (25%), Positives = 85/211 (40%)
Query: 138 SGASLTDNANNGIYKLGDGRIICLTETQKGSVIVDPDTLDTLGKF--EYSDPLGGFIQSS 195
S A+ N ++G+ L + T Q ++P L T G E + PL S
Sbjct: 173 SSANEKLNTSSGVKTL-TAKTDNSTYKQLHPSTLEPLALATQGILHPELTGPLSASHAKS 231
Query: 196 HPIVTDDEFLTLLPDLLNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYV 255
P D L P Y V R+ T E ++ AP ++HSF +T YV
Sbjct: 232 DPETGDVYNYNLSFSSGTPTYRVFRVSAETGETSILAAFTA----APAYLHSFFLTGDYV 287
Query: 256 VVPEMPLQYSVQSLLKAEPSALYQF-EWRPERKAFLHVVCKASGKIAASVEVPLYMVFHF 314
V+ S + +K S + E+ + A +VV + G + A E + FH
Sbjct: 288 VICVWNAHLSPEGFMKKPGSYIGAIKEFDNQIPAKWYVVDRRHGGLVAVYESQAFFCFHT 347
Query: 315 INAYEE----KDKDGRVIAVIADCCEH-NAD 340
INA++E D + ++A+C + N D
Sbjct: 348 INAWQETSNPSDSSTSQLDIVAECIMYENPD 378
Score = 76 (31.8 bits), Expect = 3.9e-25, Sum P(3) = 3.9e-25
Identities = 18/44 (40%), Positives = 22/44 (50%)
Query: 40 ELVVEGEIPSWLNGTYLRNGPGVW-----HIGEFNFGHLFDGYA 78
EL V G IP + GT R GPG + H F H FDG++
Sbjct: 33 ELSVTGSIPHYAAGTLYRTGPGRYKVDTKHGNTFQVSHWFDGFS 76
>RGD|1309022 [details] [associations]
symbol:Bco2 "beta-carotene oxygenase 2" species:10116 "Rattus
norvegicus" [GO:0005739 "mitochondrion" evidence=ISO] [GO:0016116
"carotenoid metabolic process" evidence=ISO] [GO:0016119 "carotene
metabolic process" evidence=ISO] [GO:0016121 "carotene catabolic
process" evidence=ISO] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISO] [GO:0051881
"regulation of mitochondrial membrane potential" evidence=ISO]
[GO:0055114 "oxidation-reduction process" evidence=ISO] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=ISO] InterPro:IPR012606 Pfam:PF08069 RGD:1309022
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 IPI:IPI00382241
EMBL:AY325176 UniGene:Rn.162999 ProteinModelPortal:Q7TP70
PRIDE:Q7TP70 UCSC:RGD:1309022 Genevestigator:Q7TP70 Uniprot:Q7TP70
Length = 481
Score = 169 (64.5 bits), Expect = 6.2e-24, Sum P(3) = 6.2e-24
Identities = 51/159 (32%), Positives = 74/159 (46%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WLNG LR GPG + G+ + H FDG A+L + EK G + + ++++
Sbjct: 104 VRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFKMEK-GTVTYKSKFLQSDT 162
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNAN-NGIYKLGDGRIICL 161
YKA ++ EF PD + F ++TDN + N + GD
Sbjct: 163 YKANSAGDRIVISEFGTLALPDPCKSIFERFMSRFEPPTMTDNTSVNFVQYKGD--YYMS 220
Query: 162 TETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVT 200
TET + VD +TL+ K PL G + S P +T
Sbjct: 221 TETNFMNK-VDIETLERTEK-----PLPG-VYYSKPFLT 252
Score = 164 (62.8 bits), Expect = 6.2e-24, Sum P(3) = 6.2e-24
Identities = 37/95 (38%), Positives = 55/95 (57%)
Query: 386 DPEEHGRGVDMCSINPA-YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGI 444
D EE G G++ IN + GKKY + Y G + +SL K+D+V + + W EEG
Sbjct: 353 DLEEEG-GIEFPQINYGRFSGKKYSFFYGCGFRHLVG--DSLIKVDVVNKTLRVWREEGC 409
Query: 445 VPSEPLFVARPGATDEDDGVVISMISEKNGGAYVV 479
PSEP+FV PGA +ED G ++S++ N + +V
Sbjct: 410 YPSEPVFVPVPGADEEDSGAILSVVITPNQTSAIV 444
Score = 59 (25.8 bits), Expect = 6.2e-24, Sum P(3) = 6.2e-24
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 309 YMVFHFINAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQ-DVLPDARVG 367
++ +H INA+E++ G + VI CCE D ++ L+NLR + D + A+
Sbjct: 250 FLTYHQINAFEDQ---GCI--VIDLCCED--DGRSLDIYQLQNLRKAGEELDQVYKAKAK 302
Query: 368 ----RFTIPFD 374
RF +P D
Sbjct: 303 SFPRRFVLPLD 313
>RGD|1597300 [details] [associations]
symbol:Tex12 "testis expressed 12" species:10116 "Rattus
norvegicus" [GO:0000795 "synaptonemal complex" evidence=ISO]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR012606 Pfam:PF08069 RGD:1597300
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 IPI:IPI00382241 Ensembl:ENSRNOT00000059191
UCSC:RGD:1597300 ArrayExpress:F1LMB4 Uniprot:F1LMB4
Length = 481
Score = 169 (64.5 bits), Expect = 6.2e-24, Sum P(3) = 6.2e-24
Identities = 51/159 (32%), Positives = 74/159 (46%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WLNG LR GPG + G+ + H FDG A+L + EK G + + ++++
Sbjct: 104 VRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFKMEK-GTVTYKSKFLQSDT 162
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNAN-NGIYKLGDGRIICL 161
YKA ++ EF PD + F ++TDN + N + GD
Sbjct: 163 YKANSAGDRIVISEFGTLALPDPCKSIFERFMSRFEPPTMTDNTSVNFVQYKGD--YYMS 220
Query: 162 TETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVT 200
TET + VD +TL+ K PL G + S P +T
Sbjct: 221 TETNFMNK-VDIETLERTEK-----PLPG-VYYSKPFLT 252
Score = 164 (62.8 bits), Expect = 6.2e-24, Sum P(3) = 6.2e-24
Identities = 37/95 (38%), Positives = 55/95 (57%)
Query: 386 DPEEHGRGVDMCSINPA-YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGI 444
D EE G G++ IN + GKKY + Y G + +SL K+D+V + + W EEG
Sbjct: 353 DLEEEG-GIEFPQINYGRFSGKKYSFFYGCGFRHLVG--DSLIKVDVVNKTLRVWREEGC 409
Query: 445 VPSEPLFVARPGATDEDDGVVISMISEKNGGAYVV 479
PSEP+FV PGA +ED G ++S++ N + +V
Sbjct: 410 YPSEPVFVPVPGADEEDSGAILSVVITPNQTSAIV 444
Score = 59 (25.8 bits), Expect = 6.2e-24, Sum P(3) = 6.2e-24
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 309 YMVFHFINAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQ-DVLPDARVG 367
++ +H INA+E++ G + VI CCE D ++ L+NLR + D + A+
Sbjct: 250 FLTYHQINAFEDQ---GCI--VIDLCCED--DGRSLDIYQLQNLRKAGEELDQVYKAKAK 302
Query: 368 ----RFTIPFD 374
RF +P D
Sbjct: 303 SFPRRFVLPLD 313
>TAIR|locus:2093751 [details] [associations]
symbol:NCED6 "nine-cis-epoxycarotenoid dioxygenase 6"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA;TAS] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA;TAS] [GO:0009639 "response to red or far red light"
evidence=IEP] [GO:0010114 "response to red light" evidence=IEP]
[GO:0016114 "terpenoid biosynthetic process" evidence=RCA]
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0010114 GO:GO:0009688 GO:GO:0009535 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 EMBL:AB028621
ProtClustDB:PLN02258 IPI:IPI00526624 RefSeq:NP_189064.1
UniGene:At.37572 ProteinModelPortal:Q9LRM7 SMR:Q9LRM7 STRING:Q9LRM7
PaxDb:Q9LRM7 EnsemblPlants:AT3G24220.1 GeneID:822008
KEGG:ath:AT3G24220 TAIR:At3g24220 InParanoid:Q9LRM7 OMA:AWEERTE
PhylomeDB:Q9LRM7 BioCyc:MetaCyc:AT3G24220-MONOMER
Genevestigator:Q9LRM7 Uniprot:Q9LRM7
Length = 577
Score = 210 (79.0 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 87/324 (26%), Positives = 142/324 (43%)
Query: 41 LVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIET 100
L V G+IPS L G Y+RNG HLFDG M+ V + ++ R +T
Sbjct: 117 LEVVGQIPSCLKGVYIRNGANPM-FPPLAGHHLFDGDGMIHAVSIGFDNQVSYSCRYTKT 175
Query: 101 EAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKL--FS---GASLTDNANN-GIYKLG 154
+ SV PKP L LA+L F+ G L D G+ G
Sbjct: 176 NRLVQETALGR------SVFPKPIGELHGHSGLARLALFTARAGIGLVDGTRGMGVANAG 229
Query: 155 ----DGRIICLTETQKG-SVIVDPD-TLDTLGKFEYSDPLGGFIQSSHPIV--TDDEFLT 206
+GR++ ++E V +D L+T+G+F + D + + +HP V T + T
Sbjct: 230 VVFFNGRLLAMSEDDLPYQVKIDGQGDLETIGRFGFDDQIDSSV-IAHPKVDATTGDLHT 288
Query: 207 LLPDLLNPGYL-VVRMEP-GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQY 264
L ++L +L ++ G R V + P P +H F +TE++VV+P+ + +
Sbjct: 289 LSYNVLKKPHLRYLKFNTCGKKTRDV--EITL---PEPTMIHDFAITENFVVIPDQQMVF 343
Query: 265 SVQSLLKAEPSALYQFEWRPERKAFLHVVCKA--SGKIAASVEVPLYMVFHFINAYEEKD 322
+ +++ +Y E+ A V+ K +G V+VP FH NA+EE+
Sbjct: 344 KLSEMIRGGSPVIYV----KEKMARFGVLSKQDLTGSDINWVDVPDCFCFHLWNAWEERT 399
Query: 323 KDGRVIAVIADCCEHNADTTIIET 346
++G + V+ C DT E+
Sbjct: 400 EEGDPVIVVIGSCMSPPDTIFSES 423
Score = 137 (53.3 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 40/126 (31%), Positives = 64/126 (50%)
Query: 391 GRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPS--- 447
G ++ IN +Y+G+K ++ Y I P + + K+D+ + G PS
Sbjct: 451 GVNLEAGHINRSYVGRKSQFVY-IAIADPWPKCSGIAKVDIQNGTVSEF-NYG--PSRFG 506
Query: 448 -EPLFVARPGATDEDDGVVISMI--SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFHG 504
EP FV G +ED G V+ + EK+ +VV+ D + +++A R P +PYGFHG
Sbjct: 507 GEPCFVPE-GEGEEDKGYVMGFVRDEEKDESEFVVV-DATDMKQVAAVRLPERVPYGFHG 564
Query: 505 CWVPEN 510
+V EN
Sbjct: 565 TFVSEN 570
>TAIR|locus:2091652 [details] [associations]
symbol:NCED3 "nine-cis-epoxycarotenoid dioxygenase 3"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009414 "response to water deprivation"
evidence=RCA;IMP] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=ISS] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA;IMP] [GO:0006970 "response to osmotic stress"
evidence=IMP] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0009414 GO:GO:0009688 GO:GO:0009535 GO:GO:0042538
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 OMA:HTLNAYD
EMBL:AB028617 ProtClustDB:PLN02258 EMBL:AB026549 EMBL:AY056255
IPI:IPI00528622 RefSeq:NP_188062.1 UniGene:At.26346
ProteinModelPortal:Q9LRR7 SMR:Q9LRR7 STRING:Q9LRR7 PaxDb:Q9LRR7
EnsemblPlants:AT3G14440.1 GeneID:820667 KEGG:ath:AT3G14440
TAIR:At3g14440 InParanoid:Q9LRR7 PhylomeDB:Q9LRR7
BioCyc:ARA:AT3G14440-MONOMER BioCyc:MetaCyc:AT3G14440-MONOMER
Genevestigator:Q9LRR7 Uniprot:Q9LRR7
Length = 599
Score = 186 (70.5 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 84/321 (26%), Positives = 143/321 (44%)
Query: 32 VKQERWEGELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGH-LFDGYAMLVKVHFEKNGR 90
V ++ L V G++P + G Y+RNG H E GH FDG M+ V FE +G
Sbjct: 130 VNEQPVRRNLPVVGKLPDSIKGVYVRNGANPLH--EPVTGHHFFDGDGMVHAVKFE-HGS 186
Query: 91 LIAGHRQIETEAYKAAKKNKKLCYREFSVSPKPDNFL-AYVGELAKLF-----SGASLTD 144
R +T + ++ + V PK L + G +A+L + A + D
Sbjct: 187 ASYACRFTQTNRFVQERQLGR------PVFPKAIGELHGHTG-IARLMLFYARAAAGIVD 239
Query: 145 NANN-GIYKLG----DGRIICLTETQKG-SVIVDPD-TLDTLGKFEYSDPLGGFIQSSHP 197
A+ G+ G +GR++ ++E V + P+ L T+G+F++ L + +HP
Sbjct: 240 PAHGTGVANAGLVYFNGRLLAMSEDDLPYQVQITPNGDLKTVGRFDFDGQLESTM-IAHP 298
Query: 198 IVTDD--EFLTLLPDLLNPGYL-VVRMEP-GTNERKVIGRVNCRGGPAPGWVHSFTMTEH 253
V + E L D+++ YL R P GT V +++ P +H F +TE+
Sbjct: 299 KVDPESGELFALSYDVVSKPYLKYFRFSPDGTKSPDVEIQLD-----QPTMMHDFAITEN 353
Query: 254 YVVVPEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAASVEVPLYMVFH 313
+VVVP+ + + + +++ +Y + R L + S I ++ P FH
Sbjct: 354 FVVVPDQQVVFKLPEMIRGGSPVVYDKN-KVARFGILDKYAEDSSNIKW-IDAPDCFCFH 411
Query: 314 FINAYEEKDKDGRVIAVIADC 334
NA+EE + D + VI C
Sbjct: 412 LWNAWEEPETDE--VVVIGSC 430
Score = 146 (56.5 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 53/206 (25%), Positives = 94/206 (45%)
Query: 304 VEVPLYMVFHFINAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPD 363
++ P FH NA+EE + D + VI C D+ E S +NL+S VL +
Sbjct: 402 IDAPDCFCFHLWNAWEEPETDE--VVVIGSCMTP-PDSIFNE--SDENLKS-----VLSE 451
Query: 364 ARVGRFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFP 423
R+ T G + ++ E+ ++ +N LG+K ++AY + P
Sbjct: 452 IRLNLKT----GESTRR--PIISNEDQQVNLEAGMVNRNMLGRKTKFAY-LALAEPWPKV 504
Query: 424 NSLTKLDLVKQKAKNWCE-EGIVPSEPLFVARPGATDEDDGVVISMI-SEKNGGAYVVLL 481
+ K+DL + K + EPLF+ G +ED+G ++ + EK + + ++
Sbjct: 505 SGFAKVDLTTGEVKKHLYGDNRYGGEPLFLPGEGG-EEDEGYILCFVHDEKTWKSELQIV 563
Query: 482 DGSTFEEIARARFPFGLPYGFHGCWV 507
+ + E A + P +PYGFHG ++
Sbjct: 564 NAVSLEVEATVKLPSRVPYGFHGTFI 589
>TAIR|locus:2202492 [details] [associations]
symbol:NCED5 "nine-cis-epoxycarotenoid dioxygenase 5"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009688
"abscisic acid biosynthetic process" evidence=IMP;TAS] [GO:0045549
"9-cis-epoxycarotenoid dioxygenase activity" evidence=TAS]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0010162 "seed dormancy process" evidence=IGI] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0009414 GO:GO:0009688
GO:GO:0009579 GO:GO:0009535 eggNOG:COG3670 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010162 HOGENOM:HOG000254836
GO:GO:0045549 KO:K09840 EMBL:AC074176 ProtClustDB:PLN02258
EMBL:AK226774 IPI:IPI00530821 PIR:A86425 RefSeq:NP_174302.1
UniGene:At.51834 ProteinModelPortal:Q9C6Z1 SMR:Q9C6Z1 IntAct:Q9C6Z1
STRING:Q9C6Z1 EnsemblPlants:AT1G30100.1 GeneID:839889
KEGG:ath:AT1G30100 TAIR:At1g30100 InParanoid:Q9C6Z1 OMA:PTYVLHF
PhylomeDB:Q9C6Z1 Genevestigator:Q9C6Z1 Uniprot:Q9C6Z1
Length = 589
Score = 177 (67.4 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 79/316 (25%), Positives = 132/316 (41%)
Query: 29 WTSVKQERWEGELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKN 88
+ V ++ + L V+G+IP ++G YLRNG + HLFDG M+ V N
Sbjct: 117 YAPVPEQSVKSSLSVDGKIPDCIDGVYLRNGANPL-FEPVSGHHLFDGDGMVHAVKIT-N 174
Query: 89 GRLIAGHRQIETEAYKAAKKNKKLCYRE-----FSVSPKPDNFLAYVGELAKLFSGASLT 143
G R ETE K+ + + S L Y L L + + T
Sbjct: 175 GDASYSCRFTETERLVQEKQLGSPIFPKAIGELHGHSGIARLMLFYARGLFGLLNHKNGT 234
Query: 144 DNANNGIYKLGDGRIICLTETQKG-SV-IVDPDTLDTLGKFEYSDPLGGFIQSSHPIV-- 199
AN G+ D R++ ++E V + D L+T+G+F++ L + +HP +
Sbjct: 235 GVANAGLVYFHD-RLLAMSEDDLPYQVRVTDNGDLETIGRFDFDGQLSSAM-IAHPKIDP 292
Query: 200 TDDEFLTLLPDLLNPGYL-VVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVP 258
E L D++ YL + P E+ + +P +H F +TE++VV+P
Sbjct: 293 VTKELFALSYDVVKKPYLKYFKFSP-EGEKSPDVEIPLA---SPTMMHDFAITENFVVIP 348
Query: 259 EMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAASVEVPLYMVFHFINAY 318
+ + + + + + Y E + R L K + ++ VE P FH NA+
Sbjct: 349 DQQVVFKLSDMFLGKSPVKYDGE-KISRFGILPRNAKDASEMVW-VESPETFCFHLWNAW 406
Query: 319 EEKDKDGRVIAVIADC 334
E + D + VI C
Sbjct: 407 ESPETDE--VVVIGSC 420
Score = 148 (57.2 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 60/207 (28%), Positives = 92/207 (44%)
Query: 304 VEVPLYMVFHFINAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPD 363
VE P FH NA+E + D + VI C AD+ E N VL +
Sbjct: 392 VESPETFCFHLWNAWESPETDE--VVVIGSCMTP-ADSIFNECDEQLN-------SVLSE 441
Query: 364 ARVGRFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFP 423
R+ T G + T++ P ++ +N LG+K RYAY + P
Sbjct: 442 IRLNLKT----GKSTRR--TII-PGSVQMNLEAGMVNRNLLGRKTRYAY-LAIAEPWPKV 493
Query: 424 NSLTKLDLVKQKAKNWCEEGI-VPSEPLFVARPGATD-EDDGVVISMI-SEKNGGAYVVL 480
+ K+DL + KN G EP F+ R +D EDDG ++S + E++ + + +
Sbjct: 494 SGFAKVDLSTGEVKNHFYGGKKYGGEPFFLPRGLESDGEDDGYIMSFVHDEESWESELHI 553
Query: 481 LDGSTFEEIARARFPFGLPYGFHGCWV 507
++ T E A + P +PYGFHG +V
Sbjct: 554 VNAVTLELEATVKLPSRVPYGFHGTFV 580
>TAIR|locus:2134796 [details] [associations]
symbol:NCED4 "nine-cis-epoxycarotenoid dioxygenase 4"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010287 "plastoglobule" evidence=IDA] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
EMBL:AL021687 EMBL:AL161550 GO:GO:0016702 GO:GO:0010287
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 EMBL:AY136353 EMBL:BT008785 EMBL:AY056789
EMBL:AK227175 IPI:IPI00536835 PIR:T04438 RefSeq:NP_193652.1
UniGene:At.1927 UniGene:At.67316 ProteinModelPortal:O49675
SMR:O49675 IntAct:O49675 STRING:O49675 PaxDb:O49675 PRIDE:O49675
EnsemblPlants:AT4G19170.1 GeneID:827655 KEGG:ath:AT4G19170
TAIR:At4g19170 InParanoid:O49675 KO:K09840 OMA:HGAWVPR
PhylomeDB:O49675 ProtClustDB:CLSN2685496 Genevestigator:O49675
Uniprot:O49675
Length = 595
Score = 271 (100.5 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 133/507 (26%), Positives = 221/507 (43%)
Query: 42 VVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAML--VKVHFEKNGRLIAGHRQIE 99
++ G +P LNG Y+RNGP + + HLFDG ML +K+H NG+ R ++
Sbjct: 129 IIHGTLPLSLNGAYIRNGPNPQFLPRGPY-HLFDGDGMLHAIKIH---NGKATLCSRYVK 184
Query: 100 TEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGAS-----LTDNAN--NGI-- 150
T Y K+ P+ F + G A + GA LT N NGI
Sbjct: 185 TYKYNVEKQT--------GAPVMPNVFSGFNGVTASVARGALTAARVLTGQYNPVNGIGL 236
Query: 151 ----YKLGDGRIICLTETQKGSVI--VDPDTLDTLGKFEYSDPLGGFIQSSHPI---VTD 201
R+ L E+ + + ++T+G++++ L ++HP +T
Sbjct: 237 ANTSLAFFSNRLFALGESDLPYAVRLTESGDIETIGRYDFDGKLA-MSMTAHPKTDPITG 295
Query: 202 DEFLTLLPDLLNPGYLVV-RMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEM 260
+ F + P +L R + +++ + + +P ++H F +T+ + + E+
Sbjct: 296 ETFAFRYGPV--PPFLTYFRFDSAGKKQRDVPIFSMT---SPSFLHDFAITKRHAIFAEI 350
Query: 261 PL--QYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAAS--VEVPLYMVFHFIN 316
L + ++ L+ S + + R L V+ K +G + EVP + + H IN
Sbjct: 351 QLGMRMNMLDLVLEGGSPVGTDNGKTPR---LGVIPKYAGDESEMKWFEVPGFNIIHAIN 407
Query: 317 AYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTIPFDGS 376
A++E D G + +IA N +I TL +L H ++ ++ T
Sbjct: 408 AWDEDD--GNSVVLIAP----NI-MSIEHTLERMDL--VHA--LVEKVKIDLVT------ 450
Query: 377 QFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYA-IGAKRPCNFPNSLTKLDLVKQK 435
G + P R +D INPA+LG+ RY YA IG P + + KLD+ K
Sbjct: 451 --GIVRR--HPIS-ARNLDFAVINPAFLGRCSRYVYAAIGDPMPKI--SGVVKLDVSKGD 503
Query: 436 ------AKNWCEEGIVPSEPLFVAR-PG--ATDEDDGVVISMI-SEKNGGAYVVLLDGST 485
A+ G EP FVAR PG +EDDG V++ + E G + +++D +
Sbjct: 504 RDDCTVARRMYGSGCYGGEPFFVARDPGNPEAEEDDGYVVTYVHDEVTGESKFLVMDAKS 563
Query: 486 --FEEIARARFPFGLPYGFHGCWVPEN 510
E +A R P +PYGFHG +V E+
Sbjct: 564 PELEIVAAVRLPRRVPYGFHGLFVKES 590
>ZFIN|ZDB-GENE-010508-1 [details] [associations]
symbol:bcmo1a "beta-carotene 15,15'-monooxygenase 1a"
species:7955 "Danio rerio" [GO:0008198 "ferrous iron binding"
evidence=NAS] [GO:0003834 "beta-carotene 15,15'-monooxygenase
activity" evidence=IDA] [GO:0030902 "hindbrain development"
evidence=IMP] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0004497 "monooxygenase
activity" evidence=IEA] [GO:0001754 "eye photoreceptor cell
differentiation" evidence=IMP] ZFIN:ZDB-GENE-010508-1 GO:GO:0008198
GO:GO:0030902 HOVERGEN:HBG050679 GO:GO:0003834 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 BRENDA:1.14.99.36 GO:GO:0001754
EMBL:AJ290390 IPI:IPI00483690 UniGene:Dr.12383 STRING:Q90WH4
ArrayExpress:Q90WH4 Uniprot:Q90WH4
Length = 516
Score = 267 (99.0 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 92/361 (25%), Positives = 153/361 (42%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V+G IP W+ GT +RNGPG++ +GE + H FDG A+L K G + R + +
Sbjct: 20 VKGSIPEWVQGTLIRNGPGMFSVGETTYNHWFDGMALLHSFAINK-GEVTYRSRYLRGDT 78
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGA--SLTDNANNGIYKLGDGRIIC 160
Y + + ++ E PD ++ S TDN N I K G+
Sbjct: 79 YNSNMQANRIVVSEMGTMAYPDPCKNIFSKVITFLSHTIPDFTDNCGNNIIKYGND-FHA 137
Query: 161 LTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDD----EFLTLLPDLLNPGY 216
+ET I DP TL+T K +Y L I +SH + T + + Y
Sbjct: 138 TSETNYIRKI-DPVTLETQEKIDYLKYLPVSIVASHTHYDKEGNSYSMGTCIAEKGKTKY 196
Query: 217 LVVRMEPGTN--------ERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQS 268
++ ++ G+ + + + CR P + HSF MT++Y + E PL+ +
Sbjct: 197 MLFKVPGGSRPDGSPPLKSAEAVCTLPCRSLLTPSYYHSFGMTDNYFIFIEQPLKLDI-- 254
Query: 269 LLKAEPSALYQFEW------RPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEK 321
LK + L + W PE +H++ + + K +A V+H +NA+E+
Sbjct: 255 -LKMATAYLRRVSWASCMKFHPEDSTLIHLIDRNTKKEVATKFYTDAMTVYHQVNAFED- 312
Query: 322 DKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQ-DVLPDARVGRFTIPF-DGSQFG 379
DG V+ D ++ D + E L L+ G ++ + RF P D + G
Sbjct: 313 --DGHVVF---DVIAYD-DNNLYEFFYLNKLKETMGATNLYCKPKFTRFVFPLSDQGETG 366
Query: 380 K 380
+
Sbjct: 367 E 367
Score = 252 (93.8 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 83/307 (27%), Positives = 138/307 (44%)
Query: 223 PGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLKA---EPSALYQ 279
P + + + CR P + HSF MT++Y + E PL+ + + A S
Sbjct: 211 PPLKSAEAVCTLPCRSLLTPSYYHSFGMTDNYFIFIEQPLKLDILKMATAYLRRVSWASC 270
Query: 280 FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGRVIA-VIA----D 333
++ PE +H++ + + K +A V+H +NA+E+ DG V+ VIA +
Sbjct: 271 MKFHPEDSTLIHLIDRNTKKEVATKFYTDAMTVYHQVNAFED---DGHVVFDVIAYDDNN 327
Query: 334 CCEHNADTTIIETLSLKNL--RSFHGQDVLPDARVGRFTIPFDGSQFGKLETVMDPEE-- 389
E + ET+ NL + + V P + G ++ V + +
Sbjct: 328 LYEFFYLNKLKETMGATNLYCKPKFTRFVFPLSDQGETGEDLVKLKYTTASAVKEKDGKI 387
Query: 390 --HGR----GVDMCSINPAYLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEG 443
G GV++ IN + GKKYRY+Y + K D ++ W +
Sbjct: 388 MCQGEVLCEGVELPRINYNFNGKKYRYSYMCCVDES-PVATRIVKFDADTKQQIEWKGDD 446
Query: 444 IVPSEPLFVARPGATDEDDGVVISMISEKNG--GAYVVLLDGSTFEEIARARFPFGLPYG 501
SEP+F+ RPGA DEDDGVV+++I G ++++LD +F+EIARA +
Sbjct: 447 GFASEPVFIPRPGAVDEDDGVVLTVIINNKPLQGGFLLVLDAKSFKEIARACLDVEIHMD 506
Query: 502 FHGCWVP 508
HG ++P
Sbjct: 507 MHGYFIP 513
>TAIR|locus:2087418 [details] [associations]
symbol:CCD1 "carotenoid cleavage dioxygenase 1"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0016118 "carotenoid catabolic process"
evidence=IDA] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA] [GO:0005773 "vacuole" evidence=IDA]
[GO:0016121 "carotene catabolic process" evidence=IMP] [GO:0016124
"xanthophyll catabolic process" evidence=IMP] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006636 "unsaturated fatty acid biosynthetic
process" evidence=RCA] [GO:0006655 "phosphatidylglycerol
biosynthetic process" evidence=RCA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
[GO:0016117 "carotenoid biosynthetic process" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0044242 "cellular
lipid catabolic process" evidence=RCA] GO:GO:0005886 GO:GO:0009506
GO:GO:0005794 GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006950 GO:GO:0046872 EMBL:AL163818 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121
EMBL:AJ005813 EMBL:BT000436 EMBL:BT002102 IPI:IPI00517969
PIR:T49193 PIR:T51734 RefSeq:NP_191911.1 UniGene:At.22615
UniGene:At.43820 ProteinModelPortal:O65572 SMR:O65572 STRING:O65572
PaxDb:O65572 PRIDE:O65572 EnsemblPlants:AT3G63520.1 GeneID:825527
KEGG:ath:AT3G63520 TAIR:At3g63520 HOGENOM:HOG000254836
InParanoid:O65572 KO:K11159 OMA:GVMMHDF PhylomeDB:O65572
ProtClustDB:PLN02491 Genevestigator:O65572 GO:GO:0045549
GO:GO:0016124 Uniprot:O65572
Length = 538
Score = 265 (98.3 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 129/500 (25%), Positives = 206/500 (41%)
Query: 40 ELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIE 99
+L V G +P LNG ++R GP + H FDG M+ V K+G+ R ++
Sbjct: 64 DLPVHGFLPECLNGEFVRVGPNPKFDAVAGY-HWFDGDGMIHGVRI-KDGKATYVSRYVK 121
Query: 100 TEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNA-NNGIYKLG---- 154
T K + + + + F + + +L + + DN NG
Sbjct: 122 TSRLKQEEFFGAAKFMK--IGDLKGFFGLLMVNVQQLRTKLKILDNTYGNGTANTALVYH 179
Query: 155 DGRIICLTETQKGSVI--VDPDTLDTLGKFEYSDPLGGFIQSSHPIV--TDDEFLTLLPD 210
G+++ L E K VI ++ L TLG +Y L ++HP V E T
Sbjct: 180 HGKLLALQEADKPYVIKVLEDGDLQTLGIIDYDKRLTHSF-TAHPKVDPVTGEMFTFGYS 238
Query: 211 LLNPGYLVVRM--EPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQS 268
P YL R+ + G V ++ P +H F +TE Y + ++P+ + +
Sbjct: 239 H-TPPYLTYRVISKDGIMHDPVPITIS-----EPIMMHDFAITETYAIFMDLPMHFRPKE 292
Query: 269 LLKAEPSALYQFEWRPERKAFLHVVCK-ASGKIAAS-VEVPLYMVFHFINAYEEKDKDGR 326
++K E +Y F+ P +KA V+ + A ++ E+P +FH NA+EE+D+
Sbjct: 293 MVK-EKKMIYSFD--PTKKARFGVLPRYAKDELMIRWFELPNCFIFHNANAWEEEDE--- 346
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTIPFDGSQFGKLETVMD 386
V+ C N D ++ + L +F G ++ RF + + KL
Sbjct: 347 --VVLITCRLENPDLDMVSGKVKEKLENF-GNELYEM----RFNMKTGSASQKKLSA--- 396
Query: 387 PEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFPNSLTKLDL--VKQKAKNWCE--- 441
VD IN Y GKK RY Y + K DL + K E
Sbjct: 397 -----SAVDFPRINECYTGKKQRYVYGTILDSIAKV-TGIIKFDLHAEAETGKRMLEVGG 450
Query: 442 ---------EGIVPSEPLFVARPGATDEDDGVVISMISEKNGG-AYVVLLDGSTF--EEI 489
EG SE ++V R A +EDDG +I + ++N G + V ++D T E +
Sbjct: 451 NIKGIYDLGEGRYGSEAIYVPRETA-EEDDGYLIFFVHDENTGKSCVTVIDAKTMSAEPV 509
Query: 490 ARARFPFGLPYGFHGCWVPE 509
A P +PYGFH +V E
Sbjct: 510 AVVELPHRVPYGFHALFVTE 529
>TAIR|locus:2032085 [details] [associations]
symbol:NCED9 "nine-cis-epoxycarotenoid dioxygenase 9"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA;TAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA;TAS] [GO:0010162 "seed dormancy process"
evidence=IGI;RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC013430
GO:GO:0009570 GO:GO:0046872 GO:GO:0009688 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010162
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 ProtClustDB:PLN02258
IPI:IPI00528094 PIR:E96812 RefSeq:NP_177960.1 UniGene:At.34302
ProteinModelPortal:Q9M9F5 SMR:Q9M9F5 STRING:Q9M9F5 PaxDb:Q9M9F5
PRIDE:Q9M9F5 EnsemblPlants:AT1G78390.1 GeneID:844175
KEGG:ath:AT1G78390 TAIR:At1g78390 InParanoid:Q9M9F5 OMA:WMAVAER
PhylomeDB:Q9M9F5 BioCyc:MetaCyc:AT1G78390-MONOMER
Genevestigator:Q9M9F5 Uniprot:Q9M9F5
Length = 657
Score = 183 (69.5 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 80/309 (25%), Positives = 135/309 (43%)
Query: 41 LVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIET 100
L V G +P + G Y+RNG H + HLFDG M+ V F+ NG + R ET
Sbjct: 199 LPVTGTVPECIQGVYVRNGANPLH-KPVSGHHLFDGDGMVHAVRFD-NGSVSYACRFTET 256
Query: 101 EAYKAAKKNKKLCYREFSVSPKPDNFL-AYVGELAKL--FS--GA-SLTDNANN-GIYKL 153
++ C R V PK L ++G +AKL F+ G L D G+
Sbjct: 257 NRLVQERE----CGRP--VFPKAIGELHGHLG-IAKLMLFNTRGLFGLVDPTGGLGVANA 309
Query: 154 G----DGRIICLTETQKGSVIVDPDT--LDTLGKFEYSDPLGGFIQSSHPIVTDD--EFL 205
G +G ++ ++E + T L+T G++++ L + +HP + + E
Sbjct: 310 GLVYFNGHLLAMSEDDLPYHVKVTQTGDLETSGRYDFDGQLKSTM-IAHPKIDPETRELF 368
Query: 206 TLLPDLLNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYS 265
L D+++ YL E+ + P +H F +TE++VV+P+ + +
Sbjct: 369 ALSYDVVSKPYLKYFRFTSDGEKSPDVEIPL---DQPTMIHDFAITENFVVIPDQQVVFR 425
Query: 266 VQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAASVEVPLYMVFHFINAYEEKDKDG 325
+ +++ +Y E + R L+ K + I +EVP FH N++EE + D
Sbjct: 426 LPEMIRGGSPVVYD-EKKKSRFGILNKNAKDASSIQW-IEVPDCFCFHLWNSWEEPETDE 483
Query: 326 RVIAVIADC 334
+ VI C
Sbjct: 484 --VVVIGSC 490
Score = 116 (45.9 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 32/112 (28%), Positives = 55/112 (49%)
Query: 399 INPAYLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCE-EGIVPSEPLFVARPGA 457
+N LG+K RYAY + P + K+DL + + + EG EPLF+ P
Sbjct: 538 VNRNLLGRKTRYAY-LALTEPWPKVSGFAKVDLSTGEIRKYIYGEGKYGGEPLFL--PSG 594
Query: 458 TDEDDG--VVISMISEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFHGCWV 507
E+DG +++ + E+ + + L++ + A P +PYGFHG ++
Sbjct: 595 DGEEDGGYIMVFVHDEEKVKSELQLINAVNMKLEATVTLPSRVPYGFHGTFI 646
>UNIPROTKB|Q9I993 [details] [associations]
symbol:BCMO1 "Beta,beta-carotene 15,15'-monooxygenase"
species:9031 "Gallus gallus" [GO:0004497 "monooxygenase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042572 "retinol metabolic process" evidence=IEA] [GO:0003834
"beta-carotene 15,15'-monooxygenase activity" evidence=IDA]
[GO:0001523 "retinoid metabolic process" evidence=IDA]
UniPathway:UPA00912 GO:GO:0046872 GO:GO:0004497 GO:GO:0042572
GO:GO:0001523 EMBL:AJ271386 IPI:IPI00595044 RefSeq:NP_989966.1
UniGene:Gga.41 STRING:Q9I993 Ensembl:ENSGALT00000008685
GeneID:395346 KEGG:gga:395346 CTD:53630 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InParanoid:Q9I993 KO:K00515 OMA:ITENYIV
OrthoDB:EOG4G7BZ5 BioCyc:MetaCyc:MONOMER-17624 NextBio:20815431
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
Uniprot:Q9I993
Length = 526
Score = 247 (92.0 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 93/354 (26%), Positives = 153/354 (43%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V+G++P+WL G LRNGPG+ IG+ + H FDG A+L F KNG + + + ++
Sbjct: 20 VQGQLPTWLQGVLLRNGPGMHTIGDTKYNHWFDGLALLHSFTF-KNGEVYYRSKYLRSDT 78
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGAS-----LTDNANNGIYKLGDGR 157
Y + ++ EF PD AK FS S TDN I K GD
Sbjct: 79 YNCNIEANRIVVSEFGTMAYPD---PCKNIFAKAFSYLSHTIPEFTDNCLINIMKTGDD- 134
Query: 158 IICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTD-DEFLTLLPDLLNPG- 215
+ET I DP TL+TL K +YS + + +SHP L + +++ G
Sbjct: 135 YYATSETNFIRKI-DPQTLETLDKVDYSKYVAVNLATSHPHYDSAGNILNMGTSIVDKGR 193
Query: 216 --YLVVRMEPGTNERK----------VIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQ 263
Y++ ++ E++ V+ + R P + HSF +TE+Y+V E P +
Sbjct: 194 TKYVLFKIPSSVPEKEKKKSCFKHLEVVCSIPSRSLLQPSYYHSFGITENYIVFIEQPFK 253
Query: 264 YSVQSLLKAEPSALYQ---FEWRPERKAFLHVVCKASGKIAASVEVPLYMVFHFINAYEE 320
+ L A + + E K + H V + + K ++ +V + +
Sbjct: 254 LDIVKLATAYIRGVNWASCLSFHKEDKTWFHFVDRKTKKEVSTKFYTDALVLY--HHINA 311
Query: 321 KDKDGRVIAVIADCCEHNADTTIIETLSLKNL-RSFHGQDVLPDARV-GRFTIP 372
++DG V+ D + D ++ + LK L + F + L RF +P
Sbjct: 312 YEEDGHVVF---DIVAYR-DNSLYDMFYLKKLDKDFEVNNKLTSIPTCKRFVVP 361
Score = 239 (89.2 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 74/247 (29%), Positives = 122/247 (49%)
Query: 285 ERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGRVIAVIADCCEHNA-DTT 342
E K + H V + + K ++ +++H INAYEE DG V+ I +++ D
Sbjct: 278 EDKTWFHFVDRKTKKEVSTKFYTDALVLYHHINAYEE---DGHVVFDIVAYRDNSLYDMF 334
Query: 343 IIETLS----LKN-LRSFHG--QDVLP-----DARVGRFTIPFDGSQFGKLET----VMD 386
++ L + N L S + V+P DA VG + S E
Sbjct: 335 YLKKLDKDFEVNNKLTSIPTCKRFVVPLQYDKDAEVGSNLVKLPTSATAVKEKDGSIYCQ 394
Query: 387 PEEHGRGVDMCSINPAYLGKKYRYAYAIGAK-RPCNFPNSLTKLDLVKQKAKNWCEEGIV 445
PE G+++ +N Y GKKY+Y YA + P P + KL++ ++ +W E+
Sbjct: 395 PEILCEGIELPRVNYDYNGKKYKYVYATEVQWSPV--PTKIAKLNVQTKEVLHWGEDHCW 452
Query: 446 PSEPLFVARPGATDEDDGVVIS--MISEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFH 503
PSEP+FV P A +ED+GVV++ ++SE N ++++LD TF+E+ RA + H
Sbjct: 453 PSEPIFVPSPDAREEDEGVVLTCVVVSEPNKAPFLLILDAKTFKELGRATVNVEMHLDLH 512
Query: 504 GCWVPEN 510
G ++P+N
Sbjct: 513 GMFIPQN 519
Score = 42 (19.8 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 11 PASVPERE---SCAEH 23
P+SVPE+E SC +H
Sbjct: 202 PSSVPEKEKKKSCFKH 217
>UNIPROTKB|I3LRK8 [details] [associations]
symbol:BCMO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003834 "beta-carotene 15,15'-monooxygenase activity"
evidence=IEA] [GO:0001523 "retinoid metabolic process"
evidence=IEA] GO:GO:0001523 GeneTree:ENSGT00500000044783
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
Ensembl:ENSSSCT00000027134 OMA:MARINDF Uniprot:I3LRK8
Length = 181
Score = 214 (80.4 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 47/125 (37%), Positives = 72/125 (57%)
Query: 387 PEEHGRGVDMCSINPAYLGKKYRYAYAIGAK-RPCNFPNSLTKLDLVKQKAKNWCEEGIV 445
PE +G+++ IN AY GK YRY +A + P P + K DL+ + + +W E
Sbjct: 31 PELLCKGLELPRINYAYNGKPYRYVFAAEVQWSP--IPTKVIKYDLLTKSSLSWGEAHCW 88
Query: 446 PSEPLFVARPGATDEDDGVVISMI--SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFH 503
P+EPLFV PGA DEDDG+++S I ++ ++++LD TF E+ARA + H
Sbjct: 89 PAEPLFVPTPGARDEDDGIILSAIVSTDPQKLPFLLVLDAKTFTELARASVDVDMHLDLH 148
Query: 504 GCWVP 508
G ++P
Sbjct: 149 GLFIP 153
>UNIPROTKB|G4MX63 [details] [associations]
symbol:MGG_08016 "Retinal pigment epithelial membrane
family protein" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CM001232
RefSeq:XP_003714968.1 ProteinModelPortal:G4MX63
EnsemblFungi:MGG_08016T0 GeneID:2678282 KEGG:mgr:MGG_08016
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 Uniprot:G4MX63
Length = 558
Score = 200 (75.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 69/229 (30%), Positives = 107/229 (46%)
Query: 300 IAASVEVPLYMVFHFINAYEEKDK--DGRVIAVIADCCEH-NADTTIIETLSLKNLRSFH 356
+ + E + FH INAYE + K D + ++AD C N D+ I L + NL S
Sbjct: 326 LVKTFESDAFYAFHTINAYEVEGKGEDASEVDIVADVCTFDNIDS--ITRLYIDNLLSDS 383
Query: 357 G-------QDVLPDARVGRFTIPFDGSQFGKLETVMDP-----EEHGR----GVDMCSIN 400
+D AR R+ + S GK + P E G G ++ SIN
Sbjct: 384 PAAKKRCEEDRFWSARYSRYRLAGVPSS-GKGDETTKPKRVQLEYQGAAELGGPELPSIN 442
Query: 401 PAYLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATD- 459
AY +K+R+ Y + A F + L KLD+ + W G SEP+FVA P +
Sbjct: 443 EAYRARKHRFVYGVTATGKSTFLDGLVKLDVDTGETICWSRPGQTASEPIFVADPDPSVY 502
Query: 460 ---EDDGVVISMISEK-NGGAYVVLLDGSTFEEIARARFPFGLPYGFHG 504
ED GV+++++ + G +Y+++L+ E+ARA + +GFHG
Sbjct: 503 GILEDAGVLLTVVLDGIQGESYLLVLNAKDMTEVARADVGGVVGFGFHG 551
Score = 105 (42.0 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 63/235 (26%), Positives = 103/235 (43%)
Query: 137 FSGASLTDNANNGIYKLGDGRIICLTETQKGSVIVDPDTLDTLG----KFEYSDPLGGFI 192
F G S + NG ++ +I T++ + DP+TL+ +G K + D L G +
Sbjct: 160 FPGLSRSAERVNG--RVEGPTLINKTDSTMMQAL-DPETLEPIGVASQKRLHPD-LAGPL 215
Query: 193 QSSHPIV---TDDEFLTLLPDLLNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFT 249
++H T D F L Y V + T E ++ + PA ++HS
Sbjct: 216 SAAHASTCPKTGDVFNYNLELGRYQTYRVFVVSAATGETSILATIKY---PA-AYLHSLF 271
Query: 250 MTEHYVVVPEMPLQYS---VQSLLK---AEPSALYQFEWRPERKAFLHVVCKASGK-IAA 302
++E+YV++ YS V +L AE A Y + +P + + K G+ +
Sbjct: 272 LSENYVILCVWNCFYSMGGVSTLWTRNLAEAFAPYD-KTKPA--TWFVIDRKPGGRGLVK 328
Query: 303 SVEVPLYMVFHFINAYEEKDK--DGRVIAVIADCCEH-NADTTIIETLSLKNLRS 354
+ E + FH INAYE + K D + ++AD C N D+ I L + NL S
Sbjct: 329 TFESDAFYAFHTINAYEVEGKGEDASEVDIVADVCTFDNIDS--ITRLYIDNLLS 381
Score = 63 (27.2 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 34 QERWEGELVVEGEIPSWLNGTYLRNGPGVWHI-----GE----FNFGHLFDGYAML 80
QE EL V+G+IP++ G RNG G + GE + H FD +A +
Sbjct: 21 QELEPKELTVKGDIPAYCAGVLFRNGLGPRSVETDKNGEKTTVYKTSHWFDSFAQV 76
>UNIPROTKB|O06785 [details] [associations]
symbol:MT0683 "Carotenoid cleavage oxygenase" species:1773
"Mycobacterium tuberculosis" [GO:0010436 "carotenoid dioxygenase
activity" evidence=IDA] [GO:0016118 "carotenoid catabolic process"
evidence=IDA] EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 EMBL:BX842574
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010436
PIR:A70534 RefSeq:NP_215168.1 RefSeq:NP_335094.1
RefSeq:YP_006513995.1 ProteinModelPortal:O06785 SMR:O06785
PRIDE:O06785 EnsemblBacteria:EBMYCT00000002162
EnsemblBacteria:EBMYCT00000072242 GeneID:13318540 GeneID:888089
GeneID:925966 KEGG:mtc:MT0683 KEGG:mtu:Rv0654 KEGG:mtv:RVBD_0654
PATRIC:18123223 TubercuList:Rv0654 HOGENOM:HOG000254835 OMA:HTLNAYD
ProtClustDB:CLSK790657 GO:GO:0016118 Uniprot:O06785
Length = 501
Score = 131 (51.2 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 60/244 (24%), Positives = 96/244 (39%)
Query: 280 FEWRPERKAFLHVVCKASGKIAA---SVEVPLYMVFHFINAYEEKDKDGRVIAVIADCCE 336
+ W P A + V+ + G +E P Y V+H +NAY E C
Sbjct: 280 YAWNPSYPARVGVMPREGGNEDVRWFDIE-PCY-VYHPLNAYSE--------------CR 323
Query: 337 HNADTTIIETLSLKNL----RSFHGQDVLPDARVGRFTIPFDGSQFGKLETVMDPEEHGR 392
+ A+ +++ + + R G D P + R+TI G + + R
Sbjct: 324 NGAEVLVLDVVRYSRMFDRDRRGPGGDSRPS--LDRWTINL---ATGAVTAECRDD---R 375
Query: 393 GVDMCSINPAYLGKKYRYAYAIGAK------RPCNFPNSLTKLDLVKQKAK-NWCEEGIV 445
+ IN +G +R+AY +G + L K D V + + ++
Sbjct: 376 AQEFPRINETLVGGPHRFAYTVGIEGGFLVGAGAALSTPLYKQDCVTGSSTVASLDPDLL 435
Query: 446 PSEPLFVARPGATDEDDGVVISMISEKNGG-AYVVLLDGSTFEEIARARFPFGLPYGFHG 504
E +FV P A EDDG+++ + ++LLD T E IA P +P GFHG
Sbjct: 436 IGEMVFVPNPSARAEDDGILMGYGWHRGRDEGQLLLLDAQTLESIATVHLPQRVPMGFHG 495
Query: 505 CWVP 508
W P
Sbjct: 496 NWAP 499
Score = 87 (35.7 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 37/137 (27%), Positives = 68/137 (49%)
Query: 156 GRIICLTETQKGSVIVD-PDTLDTLGKFEYSDPL-GGFIQSSHPIVTDDEF--LTLLPDL 211
GR + L E G V + D LDT+G ++ L GG+ ++HP D L +
Sbjct: 124 GRTLALVEA--GVVNYELTDELDTVGPCDFDGTLHGGY--TAHP-QRDPHTGELHAVSYS 178
Query: 212 LNPGYLVVRMEPGTN--ERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSL 269
G+ V GT+ R+ + + G P +HSF++T++YVV+ ++P+ + +
Sbjct: 179 FARGHRVQYSVIGTDGHARRTVD-IEVAGSPM---MHSFSLTDNYVVIYDLPVTFDPMQV 234
Query: 270 LKAEPSALYQFEWRPER 286
+ P+++ ++ RP R
Sbjct: 235 V---PASVPRWLQRPAR 248
Score = 79 (32.9 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 25/68 (36%), Positives = 32/68 (47%)
Query: 40 ELVVEGEIPSWLNGTYLRNGPG-VWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQI 98
+L V G IP L+G YLRNGP V + + H F G AM+ V +R +
Sbjct: 29 DLPVTGRIPEHLDGRYLRNGPNPVAEVDPATY-HWFTGDAMVHGVALRDGKARWYRNRWV 87
Query: 99 ETEAYKAA 106
T A AA
Sbjct: 88 RTPAVCAA 95
>UNIPROTKB|Q53353 [details] [associations]
symbol:Q53353 "Lignostilbene-alpha,beta-dioxygenase isozyme
I" species:13689 "Sphingomonas paucimobilis" [GO:0005506 "iron ion
binding" evidence=IDA] [GO:0046274 "lignin catabolic process"
evidence=IDA] [GO:0050054 "lignostilbene alpha beta-dioxygenase
activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] GO:GO:0005506 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0046274 EMBL:S65040 PIR:JN0595
ProteinModelPortal:Q53353 GO:GO:0050054 Uniprot:Q53353
Length = 485
Score = 124 (48.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 63/247 (25%), Positives = 101/247 (40%)
Query: 36 RWEGELV---VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLI 92
R EG+++ +EGE+P LNGT+ R P F F+G M+ F +G++
Sbjct: 18 RIEGDILDIEIEGEVPPQLNGTFHRVHPDAQFPPRFEDDQFFNGDGMVSLFRFH-DGKID 76
Query: 93 AGHRQIETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYK 152
R +T+ +K +K K + + +P D+ + + G T N N ++
Sbjct: 77 FRQRYAQTDKWKVERKAGKSLFGAYR-NPLTDD-----ASVQGMIRG---TANTNVMVHA 127
Query: 153 LGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPI---VTDD--EFLTL 207
G++ + E +I+DP TL+T G + L +HP VT + F
Sbjct: 128 ---GKLYAMKEDSP-CLIMDPLTLETEGYTNFDGKLQSQTFCAHPKIDPVTGNLCAFAYG 183
Query: 208 LPDLLNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQ 267
L+ + + P K I N P +H F +TE Y V MPL S
Sbjct: 184 AKGLMTLDMAYIEISPTGKLLKEIPFQN----PYYCMMHDFGVTEDYAVFAVMPLLSSWD 239
Query: 268 SLLKAEP 274
L + P
Sbjct: 240 RLEQRLP 246
Score = 123 (48.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 46/171 (26%), Positives = 74/171 (43%)
Query: 356 HGQDVLPDARVG---RFTIPF--DGSQFGKLETVMD-PEEHGRGVDMCSINPAYLGKKYR 409
HG P A G R+T+ +G F K E + D P+E R I+ Y + YR
Sbjct: 311 HGAPFDPVAGQGFLTRWTVDMASNGDSFEKTERLFDRPDEFPR------IDERYATRAYR 364
Query: 410 YAYAI--GAKRPCNFP--------NSLTKLDLVKQKAKNW-CEEGIVPSEPLFVARPGAT 458
+ + + ++P P N+L +DL K+ +W EP F+ R
Sbjct: 365 HGWMLILDTEKPYEAPGGAFYALTNTLGHIDLATGKSSSWWAGPRCAIQEPCFIPRSPDA 424
Query: 459 DEDDGVVISMISEKNGG-AYVVLLDGSTFEE--IARARFPFGLPYGFHGCW 506
E DG VI+++ + + + + D ++ IARA+ P + G HG W
Sbjct: 425 PEGDGYVIALVDDHVANYSDLAIFDAQHVDQGPIARAKLPVRIRQGLHGNW 475
>UNIPROTKB|Q7XU29 [details] [associations]
symbol:OSJNBb0034G17.9 "OSJNBb0034G17.9 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0010223 "secondary shoot
formation" evidence=IMP] [GO:0016121 "carotene catabolic process"
evidence=ISS] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS] GO:GO:0009570 GO:GO:0009733 GO:GO:0009926
EMBL:AP008210 EMBL:CM000141 eggNOG:COG3670 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121 GO:GO:0010223
GO:GO:0045549 GO:GO:0016124 EMBL:AL663000 RefSeq:NP_001053491.1
UniGene:Os.26493 UniGene:Os.56287 UniGene:Os.7470
EnsemblPlants:LOC_Os04g46470.1 GeneID:4336591 KEGG:osa:4336591
HOGENOM:HOG000240947 OMA:VMKNVAN ProtClustDB:PLN02969
Uniprot:Q7XU29
Length = 609
Score = 136 (52.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 44/136 (32%), Positives = 69/136 (50%)
Query: 388 EEHGRGVDMCSINPAYLGKKYRYAYA---IGAKR--PCNFP-NSLTKLDLVKQKAKNWCE 441
++H R D +INP+Y ++ R+ YA G++R P FP +S+ K+D+ A+ W
Sbjct: 477 DQHARPADFPAINPSYANQRNRFVYAGAASGSRRFLPY-FPFDSVVKVDVSDGSARWWST 535
Query: 442 EGI-VPSEPLFVARPGATDEDDGVVISM-ISEKNGGAYVVLLD----GSTFEEIARARFP 495
+G EP+FV G ED G V+ + + ++V+LD G+ +A+ P
Sbjct: 536 DGRKFVGEPVFVPTGGG--EDGGYVLLVEYAVSKHRCHLVVLDAKKIGTENALVAKLEVP 593
Query: 496 FGL--PYGFHGCWVPE 509
L P GFHG W E
Sbjct: 594 KNLTFPMGFHGFWGDE 609
Score = 113 (44.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 45/145 (31%), Positives = 62/145 (42%)
Query: 42 VVEGEIP-SWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIA-GHRQIE 99
V EG IP + GTY GPG++ + H DG+ L F R I R +E
Sbjct: 75 VTEGAIPPDFPAGTYYLAGPGIFSDDHGSTVHPLDGHGYLRSFRFRPGDRTIHYSARFVE 134
Query: 100 TEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDN-ANNGIYKLGDGRI 158
T A K + +R P F G K + N AN + + G GR+
Sbjct: 135 TAA-KREESRDGASWRFTHRGP----FSVLQG--GKKVGNVKVMKNVANTSVLRWG-GRL 186
Query: 159 ICLTETQKGSVIVDPDTLDTLGKFE 183
+CL E + VDP TL+T+G F+
Sbjct: 187 LCLWEGGQ-PYEVDPRTLETVGPFD 210
>UNIPROTKB|Q52008 [details] [associations]
symbol:lsdB "Lignostilbene-alpha,beta-dioxygenase isozyme
III" species:13689 "Sphingomonas paucimobilis" [GO:0005506 "iron
ion binding" evidence=ISS] [GO:0046274 "lignin catabolic process"
evidence=IDA] [GO:0050054 "lignostilbene alpha beta-dioxygenase
activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] GO:GO:0005506 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0046274 GO:GO:0050054 EMBL:S80637 PIR:JC4324
Uniprot:Q52008
Length = 490
Score = 181 (68.8 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 118/502 (23%), Positives = 197/502 (39%)
Query: 36 RWEGELV---VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLI 92
R EG+++ VEGEIP+ L+GT+ R P F F+G M+ F +G++
Sbjct: 18 RIEGDILDLEVEGEIPAQLDGTFHRVHPDAQFPPRFEDDQFFNGDGMVSLFRFH-DGKID 76
Query: 93 AGHRQIETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYK 152
R +T+ +K +K K + + +P D+ + + G T N N ++
Sbjct: 77 FRQRYAQTDKWKVERKAGKSLFGAYR-NPLTDD-----ASVQGMIRG---TANTNVMVHA 127
Query: 153 LGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSH----PIVTDD-EFLTL 207
G++ + E +I+DP TL+T G + L S+H P+ + F
Sbjct: 128 ---GKLYAMKEDSP-CLIMDPLTLETEGYTNFDGKLKNQTFSAHAKIDPVTGNFCNFGYA 183
Query: 208 LPDLLNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQ 267
LL ++P N ++ + P +H + +TEHY + +P +
Sbjct: 184 ATGLLTTDCSYFEIDPAGN---LLFETEFQV-PYYCMMHDYGLTEHYAIFHIVPCSPNWD 239
Query: 268 SLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAASV---EVP-LYMVFHFINAYEEKDK 323
L KA L F + +L VV + G V + P H +NA+EE K
Sbjct: 240 RL-KA---GLPHFGFDTTLPVWLGVVPRGPGVTNKDVRWFKAPKTIFASHVMNAFEEGSK 295
Query: 324 DGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDAR---VGRFTIPFDGSQFGK 380
+ DT E + HG P A + R+T+ GS
Sbjct: 296 I-------------HFDTPQAENNAFPFFPDIHGAPFDPVAARPYLHRWTVDL-GSNS-- 339
Query: 381 LETVMDPEEHGRGVD-MCSINPAYLGKKYRYAYAI----------GAKRPCNFP-NSLTK 428
E + + +D ++ Y+G+ YR+ + + R F N +
Sbjct: 340 -EDFAEVRQLTSWIDEFPRVDARYVGQPYRHGWGLVMDPEMEMEFARGRASGFKMNRIGH 398
Query: 429 LDLVKQKAKNW-CEEGIVPSEPLFVARPGATDEDDGVVISMISEK-NGGAYVVLLDGSTF 486
D K +W C + EP FV R + E DG +I+++ + +V+LD
Sbjct: 399 WDHATGKEDSWWCGPQSIIQEPCFVPRMADSAEGDGYIIALVDNLITNYSDLVVLDALNL 458
Query: 487 EE--IARARFPFGLPYGFHGCW 506
++ I RA+ P L G HG W
Sbjct: 459 KDGPIGRAKLPIRLRSGLHGNW 480
>UNIPROTKB|Q746V1 [details] [associations]
symbol:GSU3417 "Dioxygenase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0008150 "biological_process"
evidence=ND] [GO:0016491 "oxidoreductase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
GO:GO:0016491 InterPro:IPR006311 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016702 PROSITE:PS51318
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 InterPro:IPR019546 TIGRFAMs:TIGR01409
RefSeq:NP_954457.1 ProteinModelPortal:Q746V1 GeneID:2686608
KEGG:gsu:GSU3417 PATRIC:22029691 KO:K00464 OMA:INIAERS
ProtClustDB:CLSK743204 BioCyc:GSUL243231:GH27-3391-MONOMER
Uniprot:Q746V1
Length = 509
Score = 174 (66.3 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 79/302 (26%), Positives = 126/302 (41%)
Query: 30 TSVKQERWEGELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNG 89
TS+++E + E VEG IP+ L GT RNGP ++ G L DG M+ F G
Sbjct: 48 TSLREEH-DYEARVEGTIPAGLRGTLYRNGPALFDRGGMRKRTLLDGDGMVQAFRFGDRG 106
Query: 90 RLIAGHRQIETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNG 149
A +R + T + + + + +S P V +L S A +T
Sbjct: 107 IRYA-NRFVRTRKFVEEEAAGRFLHPTWSTQA-PGGIWTNVWPTERLLSQAGIT------ 158
Query: 150 IYKLGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLP 209
++ GR+ E+ + DPDTL T+G+ + P S+H +F +
Sbjct: 159 VFPWR-GRLYAFDESSFPYEL-DPDTLATVGETTFGLPRDLTTYSAH-----GKFDPVTG 211
Query: 210 DLLNPGYLVVRMEPGT-------NERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPL 262
+ L+ G +R P T N + R P ++H + +TE +VV P+
Sbjct: 212 EWLHFG---IRYGPRTFVHLTTFNADGTLRRHRALELPRAIYMHDWFVTERHVVFHLHPV 268
Query: 263 QYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAAS-VEVPLYMVFHFINAYEEK 321
+ + L S WRPER L +V + G+ VE ++H NA+EE+
Sbjct: 269 EIAYWPFLLGIRSMAESLRWRPERGTIL-MVAERDGEAPPRLVETEACYLWHTFNAWEER 327
Query: 322 DK 323
K
Sbjct: 328 GK 329
Score = 136 (52.9 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 79/351 (22%), Positives = 137/351 (39%)
Query: 171 VDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPGYLVVRMEPGT----- 225
+DPDTL T+G+ + P S+H +F + + L+ G +R P T
Sbjct: 178 LDPDTLATVGETTFGLPRDLTTYSAH-----GKFDPVTGEWLHFG---IRYGPRTFVHLT 229
Query: 226 --NERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLKAEPSALYQFEWR 283
N + R P ++H + +TE +VV P++ + L S WR
Sbjct: 230 TFNADGTLRRHRALELPRAIYMHDWFVTERHVVFHLHPVEIAYWPFLLGIRSMAESLRWR 289
Query: 284 PERKAFLHVVCKASGKIAAS-VEVPLYMVFHFINAYEEKDKDGRVIAVIADCCEHNADTT 342
PER L +V + G+ VE ++H NA+EE+ K + +D
Sbjct: 290 PERGTIL-MVAERDGEAPPRLVETEACYLWHTFNAWEERGKITADFVGYRNPDHFISDDP 348
Query: 343 IIETLSLKNLRSFHGQDVLPDARVGRFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPA 402
+I + L G P V R+ I D ++ V+ H + I+
Sbjct: 349 VITAVMLGR----RGTYSYP-GEVMRYRI--DPARGTAAREVL----HQGSCEWPRIDER 397
Query: 403 YLGKKYRYAYAIGAKRPCNFPNSLTK-LDLVKQKAKNWC-EEGIVPSEPLFVARPGATDE 460
+ +R Y + P F S+ LD V + + G+ +EP+F RP
Sbjct: 398 LRCRPHRTGYMLRCL-PGEFFWSIVMGLDPVTGRTDEYSFGRGVYCTEPVFAPRPDTLAG 456
Query: 461 DDG-VVISMISEKNGGAYVVLLDGSTFEE--IARARFPFGLPYGFHGCWVP 508
G +++ + + + + +LD + +A R +P+ +HG W P
Sbjct: 457 GPGWLLVELYDSRTRTSSLAILDADRIADGPLALVRLTHHVPFSYHGWWQP 507
>TIGR_CMR|GSU_3417 [details] [associations]
symbol:GSU_3417 "dioxygenase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0008150 "biological_process"
evidence=ND] [GO:0016491 "oxidoreductase activity" evidence=ISS]
GO:GO:0016491 InterPro:IPR006311 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016702 PROSITE:PS51318
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 InterPro:IPR019546 TIGRFAMs:TIGR01409
RefSeq:NP_954457.1 ProteinModelPortal:Q746V1 GeneID:2686608
KEGG:gsu:GSU3417 PATRIC:22029691 KO:K00464 OMA:INIAERS
ProtClustDB:CLSK743204 BioCyc:GSUL243231:GH27-3391-MONOMER
Uniprot:Q746V1
Length = 509
Score = 174 (66.3 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 79/302 (26%), Positives = 126/302 (41%)
Query: 30 TSVKQERWEGELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNG 89
TS+++E + E VEG IP+ L GT RNGP ++ G L DG M+ F G
Sbjct: 48 TSLREEH-DYEARVEGTIPAGLRGTLYRNGPALFDRGGMRKRTLLDGDGMVQAFRFGDRG 106
Query: 90 RLIAGHRQIETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNG 149
A +R + T + + + + +S P V +L S A +T
Sbjct: 107 IRYA-NRFVRTRKFVEEEAAGRFLHPTWSTQA-PGGIWTNVWPTERLLSQAGIT------ 158
Query: 150 IYKLGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLP 209
++ GR+ E+ + DPDTL T+G+ + P S+H +F +
Sbjct: 159 VFPWR-GRLYAFDESSFPYEL-DPDTLATVGETTFGLPRDLTTYSAH-----GKFDPVTG 211
Query: 210 DLLNPGYLVVRMEPGT-------NERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPL 262
+ L+ G +R P T N + R P ++H + +TE +VV P+
Sbjct: 212 EWLHFG---IRYGPRTFVHLTTFNADGTLRRHRALELPRAIYMHDWFVTERHVVFHLHPV 268
Query: 263 QYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAAS-VEVPLYMVFHFINAYEEK 321
+ + L S WRPER L +V + G+ VE ++H NA+EE+
Sbjct: 269 EIAYWPFLLGIRSMAESLRWRPERGTIL-MVAERDGEAPPRLVETEACYLWHTFNAWEER 327
Query: 322 DK 323
K
Sbjct: 328 GK 329
Score = 136 (52.9 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 79/351 (22%), Positives = 137/351 (39%)
Query: 171 VDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPGYLVVRMEPGT----- 225
+DPDTL T+G+ + P S+H +F + + L+ G +R P T
Sbjct: 178 LDPDTLATVGETTFGLPRDLTTYSAH-----GKFDPVTGEWLHFG---IRYGPRTFVHLT 229
Query: 226 --NERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLKAEPSALYQFEWR 283
N + R P ++H + +TE +VV P++ + L S WR
Sbjct: 230 TFNADGTLRRHRALELPRAIYMHDWFVTERHVVFHLHPVEIAYWPFLLGIRSMAESLRWR 289
Query: 284 PERKAFLHVVCKASGKIAAS-VEVPLYMVFHFINAYEEKDKDGRVIAVIADCCEHNADTT 342
PER L +V + G+ VE ++H NA+EE+ K + +D
Sbjct: 290 PERGTIL-MVAERDGEAPPRLVETEACYLWHTFNAWEERGKITADFVGYRNPDHFISDDP 348
Query: 343 IIETLSLKNLRSFHGQDVLPDARVGRFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPA 402
+I + L G P V R+ I D ++ V+ H + I+
Sbjct: 349 VITAVMLGR----RGTYSYP-GEVMRYRI--DPARGTAAREVL----HQGSCEWPRIDER 397
Query: 403 YLGKKYRYAYAIGAKRPCNFPNSLTK-LDLVKQKAKNWC-EEGIVPSEPLFVARPGATDE 460
+ +R Y + P F S+ LD V + + G+ +EP+F RP
Sbjct: 398 LRCRPHRTGYMLRCL-PGEFFWSIVMGLDPVTGRTDEYSFGRGVYCTEPVFAPRPDTLAG 456
Query: 461 DDG-VVISMISEKNGGAYVVLLDGSTFEE--IARARFPFGLPYGFHGCWVP 508
G +++ + + + + +LD + +A R +P+ +HG W P
Sbjct: 457 GPGWLLVELYDSRTRTSSLAILDADRIADGPLALVRLTHHVPFSYHGWWQP 507
>TAIR|locus:2124489 [details] [associations]
symbol:NCED2 "nine-cis-epoxycarotenoid dioxygenase 2"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=ISS] GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0009688 GO:GO:0009535 EMBL:AL161548
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 EMBL:AL021710
EMBL:BT030365 IPI:IPI00523545 PIR:T04531 RefSeq:NP_193569.1
UniGene:At.32916 ProteinModelPortal:O49505 SMR:O49505 STRING:O49505
EnsemblPlants:AT4G18350.1 GeneID:827562 KEGG:ath:AT4G18350
TAIR:At4g18350 InParanoid:O49505 OMA:MNAWEDG PhylomeDB:O49505
ProtClustDB:PLN02258 BioCyc:MetaCyc:AT4G18350-MONOMER
Genevestigator:O49505 Uniprot:O49505
Length = 583
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 65/274 (23%), Positives = 121/274 (44%)
Query: 242 PGWVHSFTMTEHYVVVPEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIA 301
P +H F +TE++VV+P+ + + + ++ + ++ E + R + + +I
Sbjct: 325 PTMIHDFAITENFVVIPDQQVVFKLGEMISGKSPVVFDGE-KVSRLGIMPKDATEASQII 383
Query: 302 ASVEVPLYMVFHFINAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVL 361
V P FH NA+E + + I VI C AD+ E ++LRS VL
Sbjct: 384 W-VNSPETFCFHLWNAWESPETEE--IVVIGSCMSP-ADSIFNERD--ESLRS-----VL 432
Query: 362 PDARVGRFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCN 421
+ R+ T + +++ E+ + M +N LG+K R+A+ + P
Sbjct: 433 SEIRINLRT------RKTTRRSLLVNEDVNLEIGM--VNRNRLGRKTRFAF-LAIAYPWP 483
Query: 422 FPNSLTKLDLVKQKAKNWCEEGI-VPSEPLFV---ARPGATDEDDGVVISMI-SEKNGGA 476
+ K+DL + K + G EP F+ + G +EDDG + + E+ +
Sbjct: 484 KVSGFAKVDLCTGEMKKYIYGGEKYGGEPFFLPGNSGNGEENEDDGYIFCHVHDEETKTS 543
Query: 477 YVVLLDGSTFEEIARARFPFGLPYGFHGCWVPEN 510
+ +++ + A + P +PYGFHG +V N
Sbjct: 544 ELQIINAVNLKLEATIKLPSRVPYGFHGTFVDSN 577
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 86/363 (23%), Positives = 151/363 (41%)
Query: 7 SHQSPASVPERESCAEHRNHVA--WTSVKQERWEGELVVEGEIPSWLNGTYLRNGPGVWH 64
SH+ + +P+ A+ R +A ++ V + L VEG IP ++G Y+RNG
Sbjct: 89 SHEQDSPLPKT---ADPRVQIAGNYSPVPESSVRRNLTVEGTIPDCIDGVYIRNGANPMF 145
Query: 65 IGEFNFGH-LFDGYAMLVKVHFEKNGRLIAGHRQIETEAYKAAKKNKKLCYRE-----FS 118
E GH LFDG M+ V NG R +TE K+ + + +
Sbjct: 146 --EPTAGHHLFDGDGMVHAVKIT-NGSASYACRFTKTERLVQEKRLGRPVFPKAIGELHG 202
Query: 119 VSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLTETQKGSVIVDPDT--L 176
S L Y L L + + AN G+ + R++ ++E + T L
Sbjct: 203 HSGIARLMLFYARGLCGLINNQNGVGVANAGLVYFNN-RLLAMSEDDLPYQLKITQTGDL 261
Query: 177 DTLGKFEYSDPLGGFIQSSHPIV--TDDEFLTLLPDLLNPGYL-VVRMEP-GTNERKVIG 232
T+G++++ L + +HP + E L D++ YL R P G ++
Sbjct: 262 QTVGRYDFDGQLKSAM-IAHPKLDPVTKELHALSYDVVKKPYLKYFRFSPDGVKSPEL-- 318
Query: 233 RVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHV 292
+ P +H F +TE++VV+P+ + + + ++ + ++ E + R +
Sbjct: 319 EIPLE---TPTMIHDFAITENFVVIPDQQVVFKLGEMISGKSPVVFDGE-KVSRLGIMPK 374
Query: 293 VCKASGKIAASVEVPLYMVFHFINAYEEKDKDGRVIAVIADCCEHNADTTIIET-LSLKN 351
+ +I V P FH NA+E + + I VI C AD+ E SL++
Sbjct: 375 DATEASQIIW-VNSPETFCFHLWNAWESPETEE--IVVIGSCMSP-ADSIFNERDESLRS 430
Query: 352 LRS 354
+ S
Sbjct: 431 VLS 433
>ASPGD|ASPL0000046682 [details] [associations]
symbol:AN1643 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] EMBL:BN001307 GO:GO:0016702 EMBL:AACD01000026
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
OMA:HGAWVPR HOGENOM:HOG000254835 OrthoDB:EOG4GTPN5
RefSeq:XP_659247.1 ProteinModelPortal:Q5BCT7
EnsemblFungi:CADANIAT00008281 GeneID:2875358 KEGG:ani:AN1643.2
Uniprot:Q5BCT7
Length = 480
Score = 153 (58.9 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 98/411 (23%), Positives = 169/411 (41%)
Query: 127 LAYVGELAKLFSGA---SLTDNANNGIYKLGDGRIICLTETQKGSVIVDPDTLDTLGKFE 183
LA +G+ F+ A + AN + +G+++ L E + DP TLDT G ++
Sbjct: 80 LAGLGKYRNRFTDAVELKVRSTANTNVVFF-NGQLLALKEDSPPYAL-DPVTLDTKGLYD 137
Query: 184 YSDPLGGFIQSSHPIV--TDDEFLTLLPDLLN---PGYLVVRMEPGTNERKVIGRVNCRG 238
+ L ++HP E + + P + P +V+ V
Sbjct: 138 FEGQLPSLTFTAHPKFDPATGEMVCFGYEARGDGTPDVCYYSVSPTGKFTEVVWLV---- 193
Query: 239 GPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASG 298
P +H F +T+++V+ P +P V L + + + ++W PE +L V+ +
Sbjct: 194 APVVAMIHDFAVTDNWVIFPIIP---QVCDLERMKQGGEH-WQWSPETPFYLGVMPRRGA 249
Query: 299 KIAASVEVPLYM-VF--HFINAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSF 355
K A V+ YM F H NAYE ++ G ++ + E N + +
Sbjct: 250 K-AEEVKWFRYMNSFPGHTANAYE--NEQGHLVIDLG-LSEKNVFFWWPDAQG----NAP 301
Query: 356 HGQDVLPDARVGRFTIPFDGSQFGKLETVMDPEEHGRG-VDMCSINPAYLGKKYRYAY-- 412
++ +++ RFTI Q L T+ +PE G + I+ + + YR+ Y
Sbjct: 302 EPSSIV--SQLVRFTID---PQTEDL-TLREPEVLQEGNSEFYRIDDRFATRPYRHCYFD 355
Query: 413 -----------AIGAKRPCNFP--NSLTKLDLVKQKAKNWCEEGI-VPSEPLFVARPGAT 458
IG K FP NSL LD + + + + EP+F+ R ++
Sbjct: 356 LMDPQLGTDFERIGTKIGGGFPLYNSLAHLDHTTGQVEVYFPGRTHLVQEPVFIPRKNSS 415
Query: 459 DEDDGVVISMISEKNGGAYVV-LLDGSTFEEI-ARARFPFGLPYGFHGCWV 507
E DG V+++++ + A + LLD F A+ P L G HG WV
Sbjct: 416 TEGDGHVLALVNNYDTMASELHLLDTRDFARAQAKILLPVRLRQGLHGSWV 466
Score = 46 (21.3 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 32 VKQERWEGE---LVVEGEIPSWLNGTYLRNGP 60
+K R+EG+ L V GEIP ++G + R P
Sbjct: 18 MKPCRFEGDVSHLEVYGEIPKDIDGVFYRVMP 49
>ASPGD|ASPL0000067272 [details] [associations]
symbol:AN7062 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR011047 SUPFAM:SSF50998 EMBL:BN001304
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 EMBL:AACD01000118 RefSeq:XP_664666.1
ProteinModelPortal:Q5AXB8 EnsemblFungi:CADANIAT00000409
GeneID:2869943 KEGG:ani:AN7062.2 OMA:FQEPIFV OrthoDB:EOG4GTPN5
Uniprot:Q5AXB8
Length = 555
Score = 96 (38.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 71/319 (22%), Positives = 130/319 (40%)
Query: 36 RWEGE---LVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLI 92
R EG+ L + G+IP+ ++GT+ R P + F+G + + N
Sbjct: 43 RIEGDVENLQITGQIPADIDGTFFRVQPDHRFPPIYESDIHFNGDGNVTAIRIT-NSTAH 101
Query: 93 AGHRQIETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYK 152
R + T+ ++A + + + ++ +P DN E K G T AN I+
Sbjct: 102 FKQRYVRTDRFQAEGQAGRALFGKYR-NPYTDN------EAVK---GVIRTA-ANTNIF- 149
Query: 153 LGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLL 212
G ++ T+ +DP +L+T+G++++ + ++HP +F +++
Sbjct: 150 FWRGMLLA-TKEDGPPYAMDPVSLETIGRYDFEGQVLSPTFTAHP-----KFDPKTGEMV 203
Query: 213 NPGYLVVRMEPGTNERK-----VIGRVNCRG---------GPAPGWVHSFTMTEHYVVVP 258
GY E G N V+ ++ G P G +H +++ +VV+P
Sbjct: 204 CYGY-----EAGGNGNDGSCDIVVYTIDANGVKTEESWYKAPFCGIIHDCGISDKWVVLP 258
Query: 259 EMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAASVEVPLYMVF--HFIN 316
PL+ + L K E + W PE + VV + GK F H ++
Sbjct: 259 MTPLKCDPERLKKGEN----HWAWDPEEDQWYGVVPRRGGKPGDIRWYRSKNAFQGHTVS 314
Query: 317 AYEEKDKDGRVI--AVIAD 333
Y+ D G+V+ IAD
Sbjct: 315 CYDTPD--GKVVFDLTIAD 331
Score = 86 (35.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 448 EPLFVARPGATDEDDGVVISMISEKNGGAY-VVLLDGSTFEE--IARARFPFGLPYGFHG 504
EP F+ R G+T+E DG ++++++ + V + D + IA PF L G HG
Sbjct: 452 EPAFIPRAGSTEEGDGYIVALLNHLDVLRNDVCIFDARKIAQGPIAVIHLPFKLRLGLHG 511
Query: 505 CWVPEN 510
+V E+
Sbjct: 512 NFVEES 517
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.138 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 510 510 0.00087 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 57
No. of states in DFA: 623 (66 KB)
Total size of DFA: 330 KB (2167 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.35u 0.14s 40.49t Elapsed: 00:00:02
Total cpu time: 40.37u 0.14s 40.51t Elapsed: 00:00:02
Start: Fri May 10 06:27:41 2013 End: Fri May 10 06:27:43 2013