BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010461
(510 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VY26|CCD8_ARATH Carotenoid cleavage dioxygenase 8, chloroplastic OS=Arabidopsis
thaliana GN=CCD8 PE=1 SV=1
Length = 570
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/514 (64%), Positives = 422/514 (82%), Gaps = 9/514 (1%)
Query: 5 VASHQSPASVPERESC-AEHRNHVAWTSVKQERWEGELVVEGEIPSWLNGTYLRNGPGVW 63
V + +P+ +PE+E E R HVAWTSV+QE WEGEL V+G+IP+WLNGTYLRNGPG+W
Sbjct: 58 VINSAAPSPLPEKEKVEGERRCHVAWTSVQQENWEGELTVQGKIPTWLNGTYLRNGPGLW 117
Query: 64 HIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEAYKAAKKNKKLCYREFSVSPKP 123
+IG+ +F HLFDGY+ LVK+ F+ GR+ A HR +E++AYKAAKK+ +LCYREFS +PK
Sbjct: 118 NIGDHDFRHLFDGYSTLVKLQFD-GGRIFAAHRLLESDAYKAAKKHNRLCYREFSETPKS 176
Query: 124 ----DNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLTETQKGSVIVDPDTLDTL 179
N + +GE+ +LFSG SLTDNAN G+ KLGDGR++CLTETQKGS++VD +TL+T+
Sbjct: 177 VIINKNPFSGIGEIVRLFSGESLTDNANTGVIKLGDGRVMCLTETQKGSILVDHETLETI 236
Query: 180 GKFEYSDPLGG-FIQSSHPIVTDDEFLTLLPDLLNPGYLVVRMEPGTNERKVIGRVNCRG 238
GKFEY D L IQS+HPIVT+ E TL+PDL+ PGY VVRME G+N+R+V+GRV CR
Sbjct: 237 GKFEYDDVLSDHMIQSAHPIVTETEMWTLIPDLVKPGYRVVRMEAGSNKREVVGRVRCRS 296
Query: 239 GP-APGWVHSFTMTEHYVVVPEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKAS 297
G PGWVHSF +TE+YVV+PEMPL+YSV++LL+AEP+ LY+FEW P+ AF+HV+ K +
Sbjct: 297 GSWGPGWVHSFAVTENYVVIPEMPLRYSVKNLLRAEPTPLYKFEWCPQDGAFIHVMSKLT 356
Query: 298 GKIAASVEVPLYMVFHFINAYEE-KDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFH 356
G++ ASVEVP Y+ FHFINAYEE K+ DG+ +IADCCEHNADT I++ L L LRS H
Sbjct: 357 GEVVASVEVPAYVTFHFINAYEEDKNGDGKATVIIADCCEHNADTRILDMLRLDTLRSSH 416
Query: 357 GQDVLPDARVGRFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGA 416
G DVLPDAR+GRF IP DGS++GKLET ++ E+HGR +DMCSINP YLG+KYRY YA GA
Sbjct: 417 GHDVLPDARIGRFRIPLDGSKYGKLETAVEAEKHGRAMDMCSINPLYLGQKYRYVYACGA 476
Query: 417 KRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKNGGA 476
+RPCNFPN+L+K+D+V++K KNW E G++PSEP FV RPGAT EDDGVVIS++SE+NGG+
Sbjct: 477 QRPCNFPNALSKVDIVEKKVKNWHEHGMIPSEPFFVPRPGATHEDDGVVISIVSEENGGS 536
Query: 477 YVVLLDGSTFEEIARARFPFGLPYGFHGCWVPEN 510
+ +LLDGS+FEEIARA+FP+GLPYG HGCW+P++
Sbjct: 537 FAILLDGSSFEEIARAKFPYGLPYGLHGCWIPKD 570
>sp|Q9I993|BCDO1_CHICK Beta,beta-carotene 15,15'-monooxygenase OS=Gallus gallus GN=BCMO1
PE=1 SV=1
Length = 526
Score = 185 bits (469), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 147/516 (28%), Positives = 237/516 (45%), Gaps = 64/516 (12%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V+G++P+WL G LRNGPG+ IG+ + H FDG A+L F KNG + + + ++
Sbjct: 20 VQGQLPTWLQGVLLRNGPGMHTIGDTKYNHWFDGLALLHSFTF-KNGEVYYRSKYLRSDT 78
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGAS-----LTDNANNGIYKLGDGR 157
Y + ++ EF PD AK FS S TDN I K GD
Sbjct: 79 YNCNIEANRIVVSEFGTMAYPD---PCKNIFAKAFSYLSHTIPEFTDNCLINIMKTGDDY 135
Query: 158 IICLTETQKGSVI--VDPDTLDTLGKFEYSDPLGGFIQSSHP-IVTDDEFLTLLPDLLNP 214
T + + I +DP TL+TL K +YS + + +SHP + L + +++
Sbjct: 136 Y----ATSETNFIRKIDPQTLETLDKVDYSKYVAVNLATSHPHYDSAGNILNMGTSIVDK 191
Query: 215 G---YLVVRMEPGTNER----------KVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMP 261
G Y++ ++ E+ +V+ + R P + HSF +TE+Y+V E P
Sbjct: 192 GRTKYVLFKIPSSVPEKEKKKSCFKHLEVVCSIPSRSLLQPSYYHSFGITENYIVFIEQP 251
Query: 262 LQYSVQSLLKAEPSALYQ---FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINA 317
+ + L A + + E K + H V + + K ++ +++H INA
Sbjct: 252 FKLDIVKLATAYIRGVNWASCLSFHKEDKTWFHFVDRKTKKEVSTKFYTDALVLYHHINA 311
Query: 318 YEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNL-RSFHGQDVLPDA-RVGRFTIPFD- 374
YEE DG V+ I D ++ + LK L + F + L RF +P
Sbjct: 312 YEE---DGHVVFDIVAY----RDNSLYDMFYLKKLDKDFEVNNKLTSIPTCKRFVVPLQY 364
Query: 375 ------GSQFGKLET------------VMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGA 416
GS KL T PE G+++ +N Y GKKY+Y YA
Sbjct: 365 DKDAEVGSNLVKLPTSATAVKEKDGSIYCQPEILCEGIELPRVNYDYNGKKYKYVYATEV 424
Query: 417 KRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVIS--MISEKNG 474
+ P + KL++ ++ +W E+ PSEP+FV P A +ED+GVV++ ++SE N
Sbjct: 425 QW-SPVPTKIAKLNVQTKEVLHWGEDHCWPSEPIFVPSPDAREEDEGVVLTCVVVSEPNK 483
Query: 475 GAYVVLLDGSTFEEIARARFPFGLPYGFHGCWVPEN 510
++++LD TF+E+ RA + HG ++P+N
Sbjct: 484 APFLLILDAKTFKELGRATVNVEMHLDLHGMFIPQN 519
>sp|Q8HXG8|BCDO2_MACFA Beta,beta-carotene 9',10'-oxygenase OS=Macaca fascicularis GN=BCO2
PE=2 SV=2
Length = 556
Score = 181 bits (460), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 151/520 (29%), Positives = 238/520 (45%), Gaps = 67/520 (12%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G P WLNG+ LR GPG + G+ + H FDG A+L + K G + + ++++
Sbjct: 49 VWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAK-GTVTYRSKFLQSDT 107
Query: 103 YKAAKKNKKLCYREFSVSPKPDN----FLAYVGELAKLFSGASLTDNANNGIYKLGDGRI 158
YKA ++ EF PD F ++ A++TDN N +
Sbjct: 108 YKANSAKNRIVMSEFGTLATPDPCKNVFERFMSRFELPGKAAAMTDNTNVNYVRYKGDYY 167
Query: 159 ICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP---G 215
+C TET + VD +TL+ K ++S + ++HP D + + P
Sbjct: 168 LC-TETNFMNK-VDIETLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSFGPFGFS 225
Query: 216 YLVVRMEP-------GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQS 268
Y V+R+ P T+ +VI + P + HSF MT +Y++ E PL+ ++
Sbjct: 226 YKVIRVPPEKVDLEETTHGAQVICSIAPTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLWK 285
Query: 269 LL--KAEPSALYQ-FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKD 324
+ K A W P+ HVV K +G+ + ++ FH INA+E++
Sbjct: 286 IATSKIRGKAFSDGISWEPQCNTRFHVVDKHTGQLLPGRYYSKPFVAFHHINAFEDQG-- 343
Query: 325 GRVIAVIADCCEHNADTTIIETLSLKNL---------------RSFHGQDVLP-----DA 364
+I CC+ N I+E L+NL RSF + VLP +A
Sbjct: 344 ---CVIIDLCCQDNG--RILEVYQLQNLRKAGEELDQVYNSAGRSFPRRFVLPLNVSLNA 398
Query: 365 RVGRFTIPF-----------DGSQFGKLETVM--DPEEHGRGVDMCSINPA-YLGKKYRY 410
G P DG+ + E + D E+ G G++ I + GKKYR+
Sbjct: 399 PEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKEG-GIEFPQIYYGQFSGKKYRF 457
Query: 411 AYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMI- 469
Y G + +SL K+D+V + K W E+G PSEP+FV PG +ED GV++S++
Sbjct: 458 FYGCGFRHLVG--DSLIKVDVVNKTLKVWREDGFYPSEPVFVPVPGTNEEDGGVILSVVI 515
Query: 470 -SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFHGCWVP 508
+N ++++LD FEE+ RA P +PYGFHG ++P
Sbjct: 516 TPNQNESNFLLVLDAKNFEELGRAEVPVQMPYGFHGTFIP 555
>sp|Q99NF1|BCDO2_MOUSE Beta,beta-carotene 9',10'-oxygenase OS=Mus musculus GN=Bco2 PE=1
SV=1
Length = 532
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 147/518 (28%), Positives = 238/518 (45%), Gaps = 67/518 (12%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WLNG LR GPG + G+ + H FDG A+L + E+ G + + ++++
Sbjct: 29 VRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFRMER-GTVTYKSKFLQSDT 87
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNAN-NGIYKLGDGRIICL 161
YKA ++ EF PD + F ++TDN N N + GD +
Sbjct: 88 YKANSAGGRIVISEFGTLALPDPCKSIFERFMSRFEPPTMTDNTNVNFVQYKGDYYMSTE 147
Query: 162 TETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPG---YLV 218
T VD + L+ K ++S + ++HP D + + P Y +
Sbjct: 148 TNFMNK---VDIEMLERTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSYGPRGSCYNI 204
Query: 219 VRMEPGTNE-------RKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYS----VQ 267
+R+ P E +V+ + P + HSF MT++Y++ E P++ +
Sbjct: 205 IRVPPKKKEPGETIHGAQVLCSIASTEKMKPSYYHSFGMTKNYIIFVEQPVKMKLWKIIT 264
Query: 268 SLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAASVEVPL-YMVFHFINAYEEKDKDGR 326
S ++ +P A W P+ HVV K +G++ + + ++ +H INA+E++
Sbjct: 265 SKIRGKPFAD-GISWEPQYNTRFHVVDKHTGQLLPGMYYSMPFLTYHQINAFEDQG---- 319
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLR---------------SFHGQDVLP-----DARV 366
VI CC+ + + ++ L+NLR SF + VLP DA
Sbjct: 320 -CIVIDLCCQDDGRS--LDLYQLQNLRKAGEGLDQVYELKAKSFPRRFVLPLDVSVDAAE 376
Query: 367 GRFTIPF-----------DGSQFGKLETVM--DPEEHGRGVDMCSINPA-YLGKKYRYAY 412
G+ P DG + E + D EE G G++ IN + GKKY + Y
Sbjct: 377 GKNLSPLSYSSASAVKQGDGEIWCSPENLHHEDLEEEG-GIEFPQINYGRFNGKKYSFFY 435
Query: 413 AIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEK 472
G + +SL K+D+ + + W EEG PSEP+FV PGA +ED GV++S++
Sbjct: 436 GCGFRHLVG--DSLIKVDVTNKTLRVWREEGFYPSEPVFVPVPGADEEDSGVILSVVITP 493
Query: 473 NGGA--YVVLLDGSTFEEIARARFPFGLPYGFHGCWVP 508
N ++++LD +F E+ RA P +PYGFHG +VP
Sbjct: 494 NQSESNFLLVLDAKSFTELGRAEVPVQMPYGFHGTFVP 531
>sp|Q9JJS6|BCDO1_MOUSE Beta,beta-carotene 15,15'-monooxygenase OS=Mus musculus GN=Bcmo1
PE=1 SV=2
Length = 566
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 151/529 (28%), Positives = 244/529 (46%), Gaps = 69/529 (13%)
Query: 33 KQERWEG-ELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRL 91
K+E+ E + V G IP+WL GT LRNGPG+ +GE + H FDG A+L ++G +
Sbjct: 9 KKEQLEPVQAKVTGSIPAWLQGTLLRNGPGMHTVGESKYNHWFDGLALLHSFSI-RDGEV 67
Query: 92 IAGHRQIETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGAS-----LTDNA 146
+ ++++ Y A + ++ EF PD +K FS S TDN
Sbjct: 68 FYRSKYLQSDTYIANIEANRIVVSEFGTMAYPD---PCKNIFSKAFSYLSHTIPDFTDNC 124
Query: 147 NNGIYKLGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDD-EFL 205
I K G+ TET I DP TL+TL K +Y + + +SHP + L
Sbjct: 125 LINIMKCGED-FYATTETNYIRKI-DPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVL 182
Query: 206 TLLPDLLNPG---YLVVRMEPGTNERKVIGR-----------VNCRGGPAPGWVHSFTMT 251
+ +++ G Y++ ++ + K G+ ++ R +P + HSF +T
Sbjct: 183 NMGTSVVDKGRTKYVIFKIPATVPDSKKKGKSPVKHAEVFCSISSRSLLSPSYYHSFGVT 242
Query: 252 EHYVVVPEMPLQYSVQSLLKAEPSALYQFEWRP------ERKAFLHVVCKASGK-IAASV 304
E+YVV E P + + LK + + W E K ++H++ + + K +
Sbjct: 243 ENYVVFLEQPFKLDI---LKMATAYMRGVSWASCMSFDREDKTYIHIIDQRTRKPVPTKF 299
Query: 305 EVPLYMVFHFINAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNL-RSFHGQDVLPD 363
+VFH +NAYEE DG V+ D + D+++ + L NL + F + L
Sbjct: 300 YTDPMVVFHHVNAYEE---DG---CVLFDVIAYE-DSSLYQLFYLANLNKDFEEKSRLTS 352
Query: 364 A-RVGRFTIPFD-------GSQFGKLETVM-------------DPEEHGRGVDMCSINPA 402
+ RF +P GS K+ + PE G+++ IN A
Sbjct: 353 VPTLRRFAVPLHVDKDAEVGSNLVKVSSTTATALKEKDGHVYCQPEVLYEGLELPRINYA 412
Query: 403 YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDD 462
Y GK YRY +A + P + K D++ + + W EE P+EPLFV PGA DEDD
Sbjct: 413 YNGKPYRYIFAAEVQW-SPVPTKILKYDILTKSSLKWSEESCWPAEPLFVPTPGAKDEDD 471
Query: 463 GVVISMI--SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFHGCWVPE 509
GV++S I ++ ++++LD +F E+ARA + HG ++P+
Sbjct: 472 GVILSAIVSTDPQKLPFLLILDAKSFTELARASVDADMHLDLHGLFIPD 520
>sp|Q9YGX2|RPE65_CHICK Retinoid isomerohydrolase OS=Gallus gallus GN=RPE65 PE=1 SV=1
Length = 533
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 150/512 (29%), Positives = 231/512 (45%), Gaps = 59/512 (11%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP+WL G+ LR GPG++ +G F HLFDG A+L K F K G + R + T+A
Sbjct: 30 VTGRIPTWLRGSLLRCGPGLFEVGAEPFYHLFDGQALLHKFDF-KEGHVTYHRRFVRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDNA +Y +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTYAYPDPCKNIFSRFFSYFKGVEVTDNALVNVYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP----GYLV 218
ET + I +PDTL+T+ + + + ++HP V +D + + + Y +
Sbjct: 148 ETNFITKI-NPDTLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIGNCFGKNFSLAYNI 206
Query: 219 VRMEP-------GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
+R+ P N+ +V+ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 IRIPPLQADKEDPMNKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLKFLS 266
Query: 272 AEP--SALYQ--FEWRPERKAFLHVVCKASGKIA-ASVEVPLYMVFHFINAYEEKDKDGR 326
+ A Y FE +LHV K G++ + +FH IN +E+
Sbjct: 267 SWSLWGANYMDCFESNETMGVWLHVAEKKKGRLLNIKYRTSAFNLFHHINTFEDNG---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQ-----DVLPDARVGRFTIPF--DGSQFG 379
+I D C + L L NLR+ + + P R+ +P D + G
Sbjct: 323 --FLIVDLCTWKGFEFVYNYLYLANLRANWDEVKKQAEKAPQPEARRYVLPLRIDKADTG 380
Query: 380 KL----------------ETV-MDPEEHGRG----VDMCSIN-PAYLGKKYRYAYAIGAK 417
K ETV ++PE G + IN Y GK Y Y Y +G
Sbjct: 381 KNLVTLPYTTATATLRSDETVWLEPEVIFSGPRHAFEFPQINYKKYGGKPYTYTYGLGLN 440
Query: 418 RPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKNGG-- 475
P+ L KL++ ++ W E PSEP+FV+ P A +EDDGVV+S++ G
Sbjct: 441 HFV--PDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSIVISPGSGPK 498
Query: 476 -AYVVLLDGSTFEEIARARFPFGLPYGFHGCW 506
AY+++L+ E+ARA +P FHG +
Sbjct: 499 PAYLLILNAKDMSEVARAEVEVNIPVTFHGLF 530
>sp|Q9YI25|RPE65_AMBTI Retinoid isomerohydrolase OS=Ambystoma tigrinum GN=RPE65 PE=2 SV=3
Length = 533
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 151/512 (29%), Positives = 233/512 (45%), Gaps = 59/512 (11%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WL+G+ LR GPG++ +G F HLFDG A+L K F K G +I R I T+
Sbjct: 30 VTGRIPVWLSGSLLRCGPGLFEVGSEQFYHLFDGQALLHKFEF-KGGHVIYHRRFIRTDT 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDNA +Y +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTFAFPDPCKNIFSRFLSYFQGLEVTDNALVNVYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP----GYLV 218
ET + I +P+TL+T+ K + + + ++HP + D + + + Y +
Sbjct: 148 ETNYITKI-NPETLETVKKVDLCNYVSINGVTAHPHIEHDGTVYNIGNCFGKHFAFAYNI 206
Query: 219 VRMEP-------GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
V++ P N+ KV+ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 VKIPPLQADKEDPINKAKVVVQFPCSERFKPSYVHSFGLTPNYIVFVEQPVKINLFKFLS 266
Query: 272 AEP--SALYQ--FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
+ A Y FE ++HV K +G+ + + +FH IN YE+
Sbjct: 267 SWSIWGANYMDCFESHETMGVWMHVAEKHTGEYLNIKYRTSAFNLFHHINTYEDHG---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSF-----HGQDVLPDARVGRFTIPFD------G 375
+I D C + L L NLR + P V R+ +P D G
Sbjct: 323 --FLIVDLCCWKGFEFVYNYLYLANLRENWEEVKRSAEKPPQPEVRRYVLPLDIHKVDTG 380
Query: 376 SQFGKL------------ETV-MDPEEHGRG----VDMCSIN-PAYLGKKYRYAYAIGAK 417
L ET+ ++PE G + IN + GK Y YAY +G
Sbjct: 381 KNLVNLPYTTATAVLRSDETIWLEPEVLFSGPRQAFEFPQINYKKHGGKDYTYAYGVGLN 440
Query: 418 RPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKNGG-- 475
P+ L+KL++ ++ W E PSEP+FV++P A +EDDGVV+S++ G
Sbjct: 441 HFV--PDRLSKLNVKTKETWVWQEPDTYPSEPIFVSQPDAIEEDDGVVLSVVISPGEGQK 498
Query: 476 -AYVVLLDGSTFEEIARARFPFGLPYGFHGCW 506
A++++L+ EIARA +P FHG +
Sbjct: 499 PAFLLILNAKDMSEIARAEVDSNIPVTFHGMF 530
>sp|Q8AXN9|RPE65_CYNPY Retinoid isomerohydrolase OS=Cynops pyrrhogaster GN=RPE65 PE=2 SV=3
Length = 533
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 148/512 (28%), Positives = 231/512 (45%), Gaps = 59/512 (11%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WL G+ LR GPG++ +G F HLFDG A+L K F K G + R I T+
Sbjct: 30 VTGRIPVWLTGSLLRCGPGLFEVGSEQFYHLFDGQALLHKFDF-KEGHVTYHRRFIRTDT 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDN +Y +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTFAFPDPCKNIFSRFLSYFQGLEVTDNTLVNVYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP----GYLV 218
ET + V+P+TL+T+ K + + + ++HP++ +D + + + Y +
Sbjct: 148 ETNYITK-VNPETLETIKKVDLCNYVSINGVTAHPLIENDGTVYNIGNCFGKHFSFAYNI 206
Query: 219 VRMEP-------GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
V++ P N+ KV+ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 VKIPPLQEDKEDPINKAKVVVQFPCSERFKPSYVHSFGLTPNYIVFVEQPVKINLFKFLS 266
Query: 272 AEP--SALYQ--FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
+ A Y FE ++HV K +G+ + + +FH IN YE+
Sbjct: 267 SWSIWGANYMDCFESHETMGVWMHVAEKLTGEYLNIKYRTSAFNLFHHINTYEDHG---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSF-----HGQDVLPDARVGRFTIPFD------G 375
+I D C I L L N+R + P V R+ +P D G
Sbjct: 323 --FLIVDLCCWKGFEFIYNYLYLANMRENWEEVKRNAEKAPQPEVRRYVLPLDIHKVDTG 380
Query: 376 SQFGKL------------ETV-MDPEEHGRGVDMCSINPA-----YLGKKYRYAYAIGAK 417
L ET+ ++PE G + P + GK Y +AY +G
Sbjct: 381 KNLVNLPYTTATAILRSDETIWLEPEVLFSGPRLAFEFPQINYKKFGGKDYTFAYGLGLN 440
Query: 418 RPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKNGG-- 475
P+ L+KL++ ++ W E PSEP+FV++P A +EDDGVV+S+I G
Sbjct: 441 HFV--PDRLSKLNVKTKEIWVWQEPDSYPSEPIFVSQPDAMEEDDGVVLSVIVNPGPGQK 498
Query: 476 -AYVVLLDGSTFEEIARARFPFGLPYGFHGCW 506
A++++L+ EIARA +P FHG +
Sbjct: 499 PAFLLILNAKDMSEIARAEVDINIPVTFHGMY 530
>sp|A9C3R9|RP65B_DANRE All-trans-retinyl ester 13-cis isomerohydrolase OS=Danio rerio
GN=rpe65b PE=1 SV=1
Length = 532
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 233/515 (45%), Gaps = 61/515 (11%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G+IP+WL+G+ LR GPG++ IG+ F HLFDG A++ K K+GR+ + I T+A
Sbjct: 30 VSGKIPAWLSGSLLRMGPGLFEIGDEPFNHLFDGQALIHKFDL-KDGRVTYHRKFIRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ E + PD F G +TDN + IY +G+ C T
Sbjct: 89 YVRAMTEKRVVITELGTAAYPDPCKNIFSRFFTYFQGTEVTDNCSVNIYPIGEDFYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDL----LNPGYLV 218
ET + V+PDTL+T+ K + + L ++HP + D + + + ++ Y +
Sbjct: 148 ETNFITK-VNPDTLETIKKVDLCNYLSVNGLTAHPHIEADGTVYNIGNCFGKNMSLAYNI 206
Query: 219 VRMEPGTNER-------KVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
V++ P E+ KV+ + P +VHSF MTE++ V E P++ ++ L
Sbjct: 207 VKIPPLQEEKSDPLAMSKVLVQFPSSERFKPSYVHSFGMTENHFVFVETPVKINLLKFLT 266
Query: 272 A----EPSALYQFEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
+ + + FE + H+ K GK I + +FH IN +E++
Sbjct: 267 SWSIRGSNYMDCFESNDRMGTWFHLAAKNPGKYIDHKFRTSAFNIFHHINCFEDQG---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDV------LPDARVGRFTIPFDGSQFGK 380
++ D C + L L NLR + ++V P V R+ +P D + +
Sbjct: 323 --FIVVDLCTWKGHEFVYNYLYLANLRQ-NWEEVKKAALRAPQPEVRRYVLPLDIHREEQ 379
Query: 381 LETVMDPEEHGRGVDMCSINPAYL------------------------GKKYRYAYAIGA 416
+ ++ MCS +L GK Y +AY +G
Sbjct: 380 GKNLVSLPYTTATAVMCSDGTVWLEPEVLFSGPRQAFEFPQINYSKFNGKDYTFAYGLGL 439
Query: 417 KRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISE---KN 473
P+ + KL++ ++ W E PSEPLFV P A DEDDGV++S++ +
Sbjct: 440 NH--FVPDRICKLNVKSKETWIWQEPDAYPSEPLFVQSPDAEDEDDGVLLSIVVKPGVSQ 497
Query: 474 GGAYVVLLDGSTFEEIARARFPFGLPYGFHGCWVP 508
A++++L + EIARA +P HG + P
Sbjct: 498 RPAFLLILKATDLTEIARAEVDVLIPLTLHGIYKP 532
>sp|A9C3R8|RP65C_DANRE Retinal Mueller cells isomerohydrolase OS=Danio rerio GN=rpe65c
PE=1 SV=1
Length = 532
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 146/515 (28%), Positives = 235/515 (45%), Gaps = 61/515 (11%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V GEIP+WL+G+ LR GPG++ +G+ F HLFDG A+L K K+GR+ R I T+A
Sbjct: 30 VSGEIPAWLSGSLLRMGPGLFEVGDEPFYHLFDGQALLHKFDL-KDGRVTYHRRFIRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF + PD F G +TDN IY +G+ C T
Sbjct: 89 YVRAMTEKRVVITEFGTTAYPDPCKNIFSRFFTYFQGIEVTDNCLVNIYPIGEDFYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDL----LNPGYLV 218
ET + VDPDTL+T+ K + + L ++HP + D + + + ++ Y +
Sbjct: 148 ETNFITK-VDPDTLETVKKVDLCNYLSVNGLTAHPHIEADGTVYNIGNCFGKNMSLAYNI 206
Query: 219 VRMEPGTNER-------KVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
V++ P ++ K++ + P +VHSF +TE++ V E P++ ++ L
Sbjct: 207 VKIPPLQEDKSDQFEKSKILVQFPSSERFKPSYVHSFGITENHFVFVETPVKINLLKFLT 266
Query: 272 A----EPSALYQFEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
+ + + FE + + H+ K GK I + +FH IN +E++
Sbjct: 267 SWSIRGSNYMDCFESNDKMGTWFHLAAKNPGKYIDHKFRTSAFNIFHHINCFEDQG---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDV------LPDARVGRFTIPFD------ 374
++ D C + L L NLR + ++V P V R+ +P D
Sbjct: 323 --FIVVDLCTWKGHEFVYNYLYLANLRQ-NWEEVKKAALRAPQPEVRRYVLPLDIHREEQ 379
Query: 375 GSQFGKLETV-------------MDPEEHGRG----VDMCSIN-PAYLGKKYRYAYAIGA 416
G L ++PE G + IN + GK Y +AY +G
Sbjct: 380 GKNLVSLPYTTATAVMRSDGTVWLEPEVLFSGPRQAFEFPQINYSKFNGKDYTFAYGLGL 439
Query: 417 KRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISE---KN 473
P+ + KL++ ++ W E PSEPLFV P A DEDDGV++S++ +
Sbjct: 440 NHFV--PDRICKLNVKSKETWIWQEPDAYPSEPLFVQSPDAEDEDDGVLLSIVVKPGVSQ 497
Query: 474 GGAYVVLLDGSTFEEIARARFPFGLPYGFHGCWVP 508
A++++L + EIARA +P HG + P
Sbjct: 498 RPAFLLILKATDLTEIARAEVDVLIPVTLHGIYKP 532
>sp|Q5RF16|BCDO2_PONAB Beta,beta-carotene 9',10'-oxygenase OS=Pongo abelii GN=BCO2 PE=2
SV=1
Length = 557
Score = 178 bits (452), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 148/520 (28%), Positives = 236/520 (45%), Gaps = 66/520 (12%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G P WLNG+ LR GPG + G+ + H FDG A+L + K G + + ++++
Sbjct: 49 VRGHFPKWLNGSLLRTGPGKFEFGKDKYNHWFDGMALLHQFRMAK-GTVTYRSKFLQSDT 107
Query: 103 YKAAKKNKKLCYREFSVSPKPDN----FLAYVGELAKLFSGASLTDNANNGIYKLGDGRI 158
YKA ++ EF PD F ++ A++TDN N +
Sbjct: 108 YKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFELPGKAAAMTDNTNVNYVRYKGDYY 167
Query: 159 ICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP---G 215
+C TET + VD +TL+ K ++S + ++HP D + + P
Sbjct: 168 LC-TETNFMNK-VDIETLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSFGPYGFS 225
Query: 216 YLVVRMEP-------GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQS 268
Y V+R+ P + +VI + P + HSF MT +Y++ E PL+ ++
Sbjct: 226 YKVIRVPPEKVDLGETIHGAQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLWK 285
Query: 269 LL--KAEPSALYQ-FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKD 324
+ K A W P+ + HVV K +G+ + ++ FH INA+E++
Sbjct: 286 IATSKIRGKAFSDGISWEPQCNTWFHVVDKRTGQLLPGRYYSKPFVTFHQINAFEDQG-- 343
Query: 325 GRVIAVIADCCEHNADTTIIETLSLKNLR---------------SFHGQDVLP-----DA 364
+I CC+ N T +E L+NLR SF + VLP +A
Sbjct: 344 ---CVIIDLCCQDNGRT--LEVYQLQNLRKAGEGLDQVYNSAAKSFPRRFVLPLNVSLNA 398
Query: 365 RVGRFTIPF-----------DGSQFGKLETVM--DPEEHGRGVDMCSI-NPAYLGKKYRY 410
G P DG+ + E + D E+ G G++ I + GKKY +
Sbjct: 399 PEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKEG-GIEFPQIYYDQFSGKKYHF 457
Query: 411 AYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMI- 469
Y G + +SL K+D+V + K W E+G PSEP+FV PG +ED GV++S++
Sbjct: 458 FYGCGFRHLVG-GDSLIKVDVVNKTLKVWREDGFYPSEPVFVPAPGTNEEDGGVILSVVI 516
Query: 470 -SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFHGCWVP 508
+N ++++LD F E+ RA P +PYGFHG ++P
Sbjct: 517 TPNQNESNFLLVLDAKNFGELGRAEVPVQMPYGFHGTFIP 556
>sp|Q9XT71|RPE65_CHLAE Retinoid isomerohydrolase OS=Chlorocebus aethiops GN=RPE65 PE=2
SV=3
Length = 533
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 148/511 (28%), Positives = 234/511 (45%), Gaps = 61/511 (11%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WL G+ LR GPG++ +G F HLFDG A+L K F K G + R I T+A
Sbjct: 30 VTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDF-KEGHVTYHRRFIRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDNA +Y +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP----GYLV 218
ET + I +P+TL+T+ + + + + ++HP + +D + + + Y +
Sbjct: 148 ETNFITKI-NPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNI 206
Query: 219 VRMEPGTNERK-------VIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
V++ P +++ ++ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 VKIPPLQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLS 266
Query: 272 A----EPSALYQFEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
+ + + FE +LH+ K K + + +FH IN YE+
Sbjct: 267 SWSLWGANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSPFNLFHHINTYEDNG---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDAR------VGRFTIPF--DGSQF 378
+I D C + L L NLR + ++V +AR V R+ +P D +
Sbjct: 323 --FLIVDLCCWKGFEFVYNYLYLANLRE-NWEEVKKNARKAPQPEVRRYVLPLNIDKADT 379
Query: 379 GK----------------LETV-MDPEEHGRG----VDMCSIN-PAYLGKKYRYAYAIGA 416
GK ET+ ++PE G + IN Y GK Y YAY +G
Sbjct: 380 GKNLITLPNTTATAILCSEETIWLEPEVLFSGPRQAFEFPQINYQKYCGKPYTYAYGLGL 439
Query: 417 KRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKNGG- 475
P+ L KL++ ++ W E PSEP+FV+ P A +EDDGVV+S++ G
Sbjct: 440 NH--FVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSVVVSPGAGQ 497
Query: 476 --AYVVLLDGSTFEEIARARFPFGLPYGFHG 504
AY+++L+ E+ARA +P FHG
Sbjct: 498 KPAYLLILNAKDLSEVARAEVEINIPVTFHG 528
>sp|Q16518|RPE65_HUMAN Retinoid isomerohydrolase OS=Homo sapiens GN=RPE65 PE=1 SV=3
Length = 533
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 148/511 (28%), Positives = 234/511 (45%), Gaps = 61/511 (11%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WL G+ LR GPG++ +G F HLFDG A+L K F K G + R I T+A
Sbjct: 30 VTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDF-KEGHVTYHRRFIRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDNA +Y +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP----GYLV 218
ET + I +P+TL+T+ + + + + ++HP + +D + + + Y +
Sbjct: 148 ETNFITKI-NPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNI 206
Query: 219 VRMEPGTNERK-------VIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
V++ P +++ ++ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 VKIPPLQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLS 266
Query: 272 A----EPSALYQFEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
+ + + FE +LH+ K K + + +FH IN YE+
Sbjct: 267 SWSLWGANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSPFNLFHHINTYEDNG---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDAR------VGRFTIPF--DGSQF 378
+I D C + L L NLR + ++V +AR V R+ +P D +
Sbjct: 323 --FLIVDLCCWKGFEFVYNYLYLANLRE-NWEEVKKNARKAPQPEVRRYVLPLNIDKADT 379
Query: 379 GKL----------------ETV-MDPEEHGRG----VDMCSIN-PAYLGKKYRYAYAIGA 416
GK ET+ ++PE G + IN Y GK Y YAY +G
Sbjct: 380 GKNLVTLPNTTATAILCSDETIWLEPEVLFSGPRQAFEFPQINYQKYCGKPYTYAYGLGL 439
Query: 417 KRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKNGG- 475
P+ L KL++ ++ W E PSEP+FV+ P A +EDDGVV+S++ G
Sbjct: 440 NH--FVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSVVVSPGAGQ 497
Query: 476 --AYVVLLDGSTFEEIARARFPFGLPYGFHG 504
AY+++L+ E+ARA +P FHG
Sbjct: 498 KPAYLLILNAKDLSEVARAEVEINIPVTFHG 528
>sp|Q9BYV7|BCDO2_HUMAN Beta,beta-carotene 9',10'-oxygenase OS=Homo sapiens GN=BCO2 PE=1
SV=5
Length = 579
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 146/520 (28%), Positives = 236/520 (45%), Gaps = 67/520 (12%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G P WLNG+ LR GPG + G+ + H FDG A+L + K G + + ++++
Sbjct: 72 VWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAK-GTVTYRSKFLQSDT 130
Query: 103 YKAAKKNKKLCYREFSVSPKPDN----FLAYVGELAKLFSGASLTDNANNGIYKLGDGRI 158
YKA ++ EF PD F ++ A++TDN N +
Sbjct: 131 YKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFELPGKAAAMTDNTNVNYVRYKGDYY 190
Query: 159 ICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP---G 215
+C TET + VD +TL+ K ++S + ++HP D + + P
Sbjct: 191 LC-TETNFMNK-VDIETLEKTEKVDWSKFIAVNGATAHPHYDLDGTAYNMGNSFGPYGFS 248
Query: 216 YLVVRMEP-------GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQS 268
Y V+R+ P + +VI + P + HSF MT +Y++ E PL+ ++
Sbjct: 249 YKVIRVPPEKVDLGETIHGVQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLWK 308
Query: 269 LL--KAEPSALYQ-FEWRPERKAFLHVVCKASGKIA-ASVEVPLYMVFHFINAYEEKDKD 324
+ K A W P+ HVV K +G++ ++ FH INA+E++
Sbjct: 309 IATSKIRGKAFSDGISWEPQCNTRFHVVEKRTGQLLPGRYYSKPFVTFHQINAFEDQG-- 366
Query: 325 GRVIAVIADCCEHNADTTIIETLSLKNLR-SFHGQDVLPDARVG----RFTIPF------ 373
+I CC+ N T +E L+NLR + G D + ++ RF +P
Sbjct: 367 ---CVIIDLCCQDNGRT--LEVYQLQNLRKAGEGLDQVHNSAAKSFPRRFVLPLNVSLNA 421
Query: 374 --------------------DGSQFGKLETVM--DPEEHGRGVDMCSI-NPAYLGKKYRY 410
DG+ + E + D E+ G G++ I + GKKY +
Sbjct: 422 PEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKEG-GIEFPQIYYDRFSGKKYHF 480
Query: 411 AYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMI- 469
Y G + +SL K+D+V + K W E+G PSEP+FV PG +ED GV++S++
Sbjct: 481 FYGCGFRHLVG--DSLIKVDVVNKTLKVWREDGFYPSEPVFVPAPGTNEEDGGVILSVVI 538
Query: 470 -SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFHGCWVP 508
+N ++++LD FEE+ RA P +PYGFHG ++P
Sbjct: 539 TPNQNESNFILVLDAKNFEELGRAEVPVQMPYGFHGTFIP 578
>sp|Q91XT5|BCDO1_RAT Beta,beta-carotene 15,15'-monooxygenase OS=Rattus norvegicus
GN=Bcmo1 PE=2 SV=1
Length = 566
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 152/530 (28%), Positives = 244/530 (46%), Gaps = 71/530 (13%)
Query: 33 KQERWEG-ELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRL 91
K+E+ E V G IP+WL GT LRNGPG+ +G+ + H FDG A+L ++G +
Sbjct: 9 KKEQLEPLRATVTGSIPAWLQGTLLRNGPGMHTVGDSKYNHWFDGLALLHSFSI-RDGEV 67
Query: 92 IAGHRQIETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGAS-----LTDNA 146
+ ++++ Y A + ++ EF PD +K FS S TDN
Sbjct: 68 FYRSKYLQSDTYNANIEANRIVVSEFGTMAYPD---PCKNIFSKAFSYLSHTIPDFTDNC 124
Query: 147 NNGIYKLGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTD-DEFL 205
I K G+ TET I DP TL+TL K +Y + + +SHP + L
Sbjct: 125 LINIMKCGED-FYATTETNYIRKI-DPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVL 182
Query: 206 TLLPDLLNPG---YLVVRM---EPGTNER--------KVIGRVNCRGGPAPGWVHSFTMT 251
+ + + G Y++ ++ PG+ ++ +V + R +P + HSF +T
Sbjct: 183 NMGTSIADKGGTKYVMFKIPATAPGSKKKGKNPLKHSEVFCSIPSRSLLSPSYYHSFGVT 242
Query: 252 EHYVVVPEMPLQYSVQSLLKAEPSALYQFEWRP------ERKAFLHVVCKASGK-IAASV 304
E+YVV E P + + LK + + W E K ++H++ + + K +
Sbjct: 243 ENYVVFLEQPFKLDI---LKMATAYMRGVSWASCMTFCKEDKTYIHIIDQKTRKPVPTKF 299
Query: 305 EVPLYMVFHFINAYEEKDKDGRVI-AVIADCCEHNADTTIIETLSLKNL-RSFHGQDVLP 362
+VFH +NAYEE DG V+ VIA D ++ + L NL + F + L
Sbjct: 300 YTDPMVVFHHVNAYEE---DGCVLFDVIA-----YEDNSLYQLFYLANLNKDFEEKSRLT 351
Query: 363 DA-RVGRFTIPFD-------GSQFGKLETVM-------------DPEEHGRGVDMCSINP 401
+ RF +P GS K+ + PE G+++ IN
Sbjct: 352 SVPTLRRFAVPLHVDKDAEVGSNLVKVSSTTATALKEKDDHVYCQPEVLYEGLELPRINY 411
Query: 402 AYLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDED 461
A+ GK YRY +A + P + K D++ + + W EE P+EPLFV PGA DED
Sbjct: 412 AHNGKPYRYIFAAEVQW-SPVPTKILKYDVLTKSSLKWSEESCWPAEPLFVPTPGAKDED 470
Query: 462 DGVVISMI--SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFHGCWVPE 509
DGV++S I ++ ++++LD +F E+ARA + HG ++P+
Sbjct: 471 DGVILSAIISTDPQKLPFLLILDAKSFTELARASVDVDMHLDLHGLFIPD 520
>sp|Q28175|RPE65_BOVIN Retinoid isomerohydrolase OS=Bos taurus GN=RPE65 PE=1 SV=3
Length = 533
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 151/513 (29%), Positives = 235/513 (45%), Gaps = 61/513 (11%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WL G+ LR GPG++ +G F HLFDG A+L K F K G + R I T+A
Sbjct: 30 VTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDF-KEGHVTYHRRFIRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDNA IY +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP----GYLV 218
ET + V+P+TL+T+ + + + + ++HP + +D + + + Y +
Sbjct: 148 ETNFITK-VNPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNI 206
Query: 219 VRMEPGTNERK-------VIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
V++ P +++ ++ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 VKIPPLQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLS 266
Query: 272 AEP--SALYQ--FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
+ A Y FE +LH+ K K I + +FH IN YE+ +
Sbjct: 267 SWSLWGANYMDCFESNETMGVWLHIADKKRKKYINNKYRTSPFNLFHHINTYEDHE---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDAR------VGRFTIPF--DGSQF 378
+I D C + L NLR + ++V +AR V R+ +P D +
Sbjct: 323 --FLIVDLCCWKGFEFVYNYSYLANLRE-NWEEVKKNARKAPQPEVRRYVLPLNIDKADT 379
Query: 379 GKL----------------ETV-MDPEEHGRG----VDMCSIN-PAYLGKKYRYAYAIGA 416
GK ET+ ++PE G + IN Y GK Y YAY +G
Sbjct: 380 GKNLVTLPNTTATAILCSDETIWLEPEVLFSGPRQAFEFPQINYQKYGGKPYTYAYGLGL 439
Query: 417 KRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKNGG- 475
P+ L KL++ ++ W E PSEP+FV+ P A +EDDGVV+S++ G
Sbjct: 440 NH--FVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSVVVSPGAGQ 497
Query: 476 --AYVVLLDGSTFEEIARARFPFGLPYGFHGCW 506
AY+++L+ E+ARA +P FHG +
Sbjct: 498 KPAYLLILNAKDLSEVARAEVEINIPVTFHGLF 530
>sp|Q9TVB8|RPE65_CANFA Retinoid isomerohydrolase OS=Canis familiaris GN=RPE65 PE=1 SV=3
Length = 533
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 233/513 (45%), Gaps = 61/513 (11%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WL G+ LR GPG++ +G F HLFDG A+L K F K G + R I T+A
Sbjct: 30 VTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDF-KEGHVTYHRRFIRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDNA +Y +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNP----GYLV 218
ET + I +P+TL+T+ + + + + ++HP + +D + + + Y +
Sbjct: 148 ETNFITKI-NPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNI 206
Query: 219 VRMEPGTNER-------KVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
V++ P ++ +V+ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 VKIPPLQADKEDPISKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLKFLS 266
Query: 272 AEP--SALYQ--FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
+ A Y FE +LH+ K K + + +FH IN YE+ +
Sbjct: 267 SWSLWGANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSSFNLFHHINTYEDNE---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDAR------VGRFTIPF--DGSQF 378
+I D C + L L NLR + ++V +AR V R+ +P D +
Sbjct: 323 --FLIVDLCCWKGFEFVYNYLYLANLRE-NWEEVKKNARKAPQPEVRRYVLPLNIDKADT 379
Query: 379 GK-LETVMDPEEHG--RGVDMCSINPAYL-------------------GKKYRYAYAIGA 416
GK L T+ + R + + P L GK Y YAY +G
Sbjct: 380 GKNLVTLPNTTATATLRSDETIWLEPEVLFSGPRQAFEFPQINYQKSGGKPYTYAYGLGL 439
Query: 417 KRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKNGG- 475
P+ L KL++ ++ W E PSEP+FV+ P A +EDDGVV+S++ G
Sbjct: 440 NHFV--PDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSVVVSPGAGQ 497
Query: 476 --AYVVLLDGSTFEEIARARFPFGLPYGFHGCW 506
AY+++L+ E+ARA +P FHG +
Sbjct: 498 KPAYLLILNAKDLSEVARAEVEINIPVTFHGLF 530
>sp|O70276|RPE65_RAT Retinoid isomerohydrolase OS=Rattus norvegicus GN=Rpe65 PE=2 SV=3
Length = 533
Score = 175 bits (443), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 226/513 (44%), Gaps = 65/513 (12%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WL G+ LR GPG++ +G F HLFDG A+L K F K G + R I T+A
Sbjct: 30 VTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDF-KEGHVTYYRRFIRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDNA IY +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDD-----------EFLTLLPDL 211
ET + I +P+TL+T+ + + + + ++HP + D + T+ ++
Sbjct: 148 ETNFITKI-NPETLETIKQVDLCNYVSVNGATAHPHIESDGTVYNIGNCFGKNFTVAYNI 206
Query: 212 LNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
+ L E N+ +V+ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 IKIPPLKADKEDPINKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLS 266
Query: 272 A----EPSALYQFEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
+ + + FE +LHV K K + +FH IN YE+
Sbjct: 267 SWSLWGANYMDCFESNESMGVWLHVADKKRRKYFNNKYRTSPFNLFHHINTYEDNG---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDV------LPDARVGRFTIPF--DGSQF 378
+I D C + L L NLR + ++V P V R+ +P D +
Sbjct: 323 --FLIVDLCCWKGFEFVYNYLYLANLRE-NWEEVKRNAMKAPQPEVRRYVLPLTIDKADT 379
Query: 379 GKLETVMDPEEHGRGVDMCSINPAYL------------------------GKKYRYAYAI 414
G+ V P + +CS +L GK Y YAY +
Sbjct: 380 GR-NLVTLPHTTATAI-LCSDETIWLEPEVLFSGPRQAFEFPQINYQKCGGKPYTYAYGL 437
Query: 415 GAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKNG 474
G P+ L KL++ ++ W E PSEP+FV++P A +EDDGVV+S++
Sbjct: 438 GLNH--FVPDKLCKLNVKTKEIWMWQEPDSYPSEPIFVSQPDALEEDDGVVLSVVVSPGA 495
Query: 475 G---AYVVLLDGSTFEEIARARFPFGLPYGFHG 504
G AY+++L+ EIARA +P FHG
Sbjct: 496 GQKPAYLLVLNAKDLSEIARAEVETNIPVTFHG 528
>sp|Q91ZQ5|RPE65_MOUSE Retinoid isomerohydrolase OS=Mus musculus GN=Rpe65 PE=1 SV=3
Length = 533
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 152/513 (29%), Positives = 229/513 (44%), Gaps = 61/513 (11%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G IP WL G+ LR GPG++ +G F HLFDG A+L K F K G + R I T+A
Sbjct: 30 VTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDF-KEGHVTYHRRFIRTDA 88
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLT 162
Y A K++ EF PD F G +TDNA IY +G+ C T
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFKGVEVTDNALVNIYPVGEDYYAC-T 147
Query: 163 ETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDD-----------EFLTLLPDL 211
ET + I +P+TL+T+ + + + + ++HP + D + T+ ++
Sbjct: 148 ETNFITKI-NPETLETIKQVDLCNYISVNGATAHPHIESDGTVYNIGNCFGKNFTVAYNI 206
Query: 212 LNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLK 271
+ L E N+ +V+ + C P +VHSF +T +Y+V E P++ ++ L
Sbjct: 207 IKIPPLKADKEDPINKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLS 266
Query: 272 AEP--SALYQ--FEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDGR 326
+ A Y FE +LHV K K + +FH IN YE+
Sbjct: 267 SWSLWGANYMDCFESNESMGVWLHVADKKRRKYFNNKYRTSPFNLFHHINTYEDNG---- 322
Query: 327 VIAVIADCCEHNADTTIIETLSLKNLRSFHGQDV------LPDARVGRFTIPF------D 374
+I D C + L L NLR + ++V P V R+ +P
Sbjct: 323 --FLIVDLCCWKGFEFVYNYLYLANLRE-NWEEVKRNAMKAPQPEVRRYVLPLTIDKVDT 379
Query: 375 GSQFGKL------------ETV-MDPEEHGRG----VDMCSIN-PAYLGKKYRYAYAIGA 416
G L ET+ ++PE G + IN + GK Y YAY +G
Sbjct: 380 GRNLVTLPHTTATATLRSDETIWLEPEVLFSGPRQAFEFPQINYQKFGGKPYTYAYGLGL 439
Query: 417 KRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKNGG- 475
P+ L KL++ ++ W E PSEP+FV++P A +EDDGVV+S++ G
Sbjct: 440 NHFV--PDKLCKLNVKTKEIWMWQEPDSYPSEPIFVSQPDALEEDDGVVLSVVVSPGAGQ 497
Query: 476 --AYVVLLDGSTFEEIARARFPFGLPYGFHGCW 506
AY+++L+ EIARA +P FHG +
Sbjct: 498 KPAYLLVLNAKDLSEIARAEVETNIPVTFHGLF 530
>sp|Q9HAY6|BCDO1_HUMAN Beta,beta-carotene 15,15'-monooxygenase OS=Homo sapiens GN=BCMO1
PE=1 SV=1
Length = 547
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 140/522 (26%), Positives = 237/522 (45%), Gaps = 76/522 (14%)
Query: 43 VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEA 102
V G+IP+WL GT LRNGPG+ +GE + H FDG A+L ++G + + + ++
Sbjct: 20 VTGKIPAWLQGTLLRNGPGMHTVGESRYNHWFDGLALLHSFTI-RDGEVYYRSKYLRSDT 78
Query: 103 YKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGAS-----LTDNANNGIYKLGDGR 157
Y + ++ EF PD +K FS S TDN I K G+
Sbjct: 79 YNTNIEANRIVVSEFGTMAYPD---PCKNIFSKAFSYLSHTIPDFTDNCLINIMKCGED- 134
Query: 158 IICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDD-EFLTLLPDLLNPG- 215
+ET I +P TL+TL K +Y + + +SHP + L + ++ G
Sbjct: 135 FYATSETNYIRKI-NPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGTSIVEKGK 193
Query: 216 --YLVVRMEPGTNERKVIGR-----------VNCRGGPAPGWVHSFTMTEHYVVVPEMPL 262
Y++ ++ E K G+ + R +P + HSF +TE+YV+ E P
Sbjct: 194 TKYVIFKIPATVPEGKKQGKSPWKHTEVFCSIPSRSLLSPSYYHSFGVTENYVIFLEQPF 253
Query: 263 QYSVQSLLKAEPSALYQFEW------RPERKAFLHVVCKASGK-IAASVEVPLYMVFHFI 315
+ + LK + + + W E K ++H++ + + + + +VFH +
Sbjct: 254 RLDI---LKMATAYIRRMSWASCLAFHREEKTYIHIIDQRTRQPVQTKFYTDAMVVFHHV 310
Query: 316 NAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVG------RF 369
NAYEE DG ++ D + D ++ + L NL QD ++R+ RF
Sbjct: 311 NAYEE---DG---CIVFDVIAYE-DNSLYQLFYLANL----NQDFKENSRLTSVPTLRRF 359
Query: 370 TIPFD-------GSQFGKLETVM-------------DPEEHGRGVDMCSINPAYLGKKYR 409
+P G+ K+ + PE G+++ +N A+ GK+YR
Sbjct: 360 AVPLHVDKNAEVGTNLIKVASTTATALKEEDGQVYCQPEFLYEGLELPRVNYAHNGKQYR 419
Query: 410 YAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMI 469
Y +A G + P + K D++ + + W E+ P+EPLFV PGA DEDDGV++S I
Sbjct: 420 YVFATGVQW-SPIPTKIIKYDILTKSSLKWREDDCWPAEPLFVPAPGAKDEDDGVILSAI 478
Query: 470 --SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFHGCWVPE 509
++ ++++LD +F E+ARA + HG ++ +
Sbjct: 479 VSTDPQKLPFLLILDAKSFTELARASVDVDMHMDLHGLFITD 520
>sp|Q6PBW5|RP65A_DANRE Retinoid isomerohydrolase OS=Danio rerio GN=rpe65a PE=2 SV=1
Length = 531
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 224/514 (43%), Gaps = 58/514 (11%)
Query: 42 VVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETE 101
V G IPS++ G+ LR GPG++ G F HLFDG A++ K F NG++ + ++T+
Sbjct: 29 TVTGRIPSFIKGSLLRLGPGLFEAGAEPFYHLFDGQALMHKFDF-SNGQVTYFRKFVKTD 87
Query: 102 AYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICL 161
AY A K++ EF PD F G +TDN +Y +G+ +
Sbjct: 88 AYVRAITEKRVVITEFGTCAYPDPCKNIFSRFFSYFKGVEVTDNCLVNVYPIGED-FYAV 146
Query: 162 TETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDLLNPG----YL 217
TET + V+ DTL+TL K + + + ++HP + D + + + + G Y
Sbjct: 147 TETNYITK-VNVDTLETLKKVDMCNYVNINGVTAHPHIERDGTVYNIGNCMGKGASLAYN 205
Query: 218 VVRMEPGTNER-------KVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLL 270
+VR+ P ++ KV+ + P +VHSF MTE+Y V E P++ ++ L
Sbjct: 206 IVRIPPTQKDKSDPIEKSKVVVQFPSAERFKPSYVHSFGMTENYFVFVETPVKINLLKFL 265
Query: 271 KA----EPSALYQFEWRPERKAFLHVVCKASGK-IAASVEVPLYMVFHFINAYEEKDKDG 325
A + + FE E+ ++H+ K G+ I +FH IN YE+
Sbjct: 266 SAWSIRGSNYMDCFESDEEKGTWIHIARKHPGEYIDYKFRTSAMGLFHHINCYEDSG--- 322
Query: 326 RVIAVIADCCEHNADTTIIETLSLKNLRSF-----HGQDVLPDARVGRFTIPFD------ 374
++ D C + L L NLR+ + P V R+ IP D
Sbjct: 323 ---FIVFDLCAWKGFEFVYNYLWLANLRANWEEVKRNAMIAPQPEVRRYVIPLDPFREEQ 379
Query: 375 GSQFGKLETV-------------MDPEEHGRG----VDMCSINPAYL-GKKYRYAYAIGA 416
G L ++PE G + IN + GK Y YAY +G
Sbjct: 380 GKNLISLPYTTATATMRADGTIWLEPEVLFSGPRQAFEFPQINYRMVNGKNYTYAYGLGL 439
Query: 417 KRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKNGG- 475
P+ + KL++ ++ W E PSEPLFV P DEDDG++++++
Sbjct: 440 NHFV--PDRICKLNVRTKETWVWQEPDSYPSEPLFVQTPDGVDEDDGILMTIVVSPGAQR 497
Query: 476 -AYVVLLDGSTFEEIARARFPFGLPYGFHGCWVP 508
Y ++L+ EIARA P FHG + P
Sbjct: 498 PTYCLILNAKDLSEIARAEVEILTPVTFHGMYKP 531
>sp|P74334|ACOX_SYNY3 Apocarotenoid-15,15'-oxygenase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1541 PE=1 SV=1
Length = 490
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 223/517 (43%), Gaps = 54/517 (10%)
Query: 11 PASVPERESCAEHRNHVAWTSVKQERWEGELV-VEGEIPSWLNGTYLRNGPGVWHIGEFN 69
P S P + S + + S QE W+ + VEG IP L GT RNGPG+ IG+
Sbjct: 6 PTSSPSQRSYSPQDWLRGYQSQPQE-WDYWVEDVEGSIPPDLQGTLYRNGPGLLEIGDRP 64
Query: 70 FGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEAYKAAKKNKKLCYREFSVSPKPDNFLAY 129
H FDG M+ F +GR+ + + T+ Y +K K+ YR S +L
Sbjct: 65 LKHPFDGDGMVTAFKFPGDGRVHFQSKFVRTQGYVEEQKAGKMIYRGVFGSQPAGGWLKT 124
Query: 130 VGELAKLFSGASLTDNANNGIYKLGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSDPLG 189
+ +L L + AN I GD R++ L E + + +P L T+G D LG
Sbjct: 125 IFDL-------RLKNIANTNITYWGD-RLLALWEGGQPHRL-EPSNLATIGL----DDLG 171
Query: 190 GFIQSSHPIVTD---DEFLTLLPDLLNPGYLVVRMEPGTNERKVIGRVNCRGG------- 239
G + P+ D T D P Y+ ++ + + ++ +G
Sbjct: 172 GILAEGQPLSAHPRIDPASTF--DGGQPCYVTFSIKSSLSSTLTLLELDPQGKLLRQKTE 229
Query: 240 --PAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKAS 297
P ++H F +T HY + + + + L A ++ P++ A + +V +
Sbjct: 230 TFPGFAFIHDFAITPHYAIFLQNNVTLNGLPYLFGLRGAGECVQFHPDKPAQIILVPRDG 289
Query: 298 GKIAASVEVPLYMVFHFINAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHG 357
G+I + V VFH NA+EE K +I D +N ++ + + + RS +
Sbjct: 290 GEI-KRIPVQAGFVFHHANAFEENGK------IILDSICYN---SLPQVDTDGDFRSTNF 339
Query: 358 QDVLPDARVGRFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAK 417
++ P ++ RFTI + K V R + ++P +G+ YRY Y A
Sbjct: 340 DNLDP-GQLWRFTIDPAAATVEKQLMV------SRCCEFPVVHPQQVGRPYRYVYMGAAH 392
Query: 418 RPC-NFP-NSLTKLDLVK--QKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKN 473
N P ++ K+DL + +++ G EP+FV RPG EDDG ++ +I + +
Sbjct: 393 HSTGNAPLQAILKVDLESGTETLRSFAPHGFA-GEPIFVPRPGGVAEDDGWLLCLIYKAD 451
Query: 474 -GGAYVVLLDGS--TFEEIARARFPFGLPYGFHGCWV 507
+ +V+LD T IA + +PY HG W
Sbjct: 452 LHRSELVILDAQDITAPAIATLKLKHHIPYPLHGSWA 488
>sp|Q9LRM7|NCED6_ARATH 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic
OS=Arabidopsis thaliana GN=NCED6 PE=2 SV=1
Length = 577
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 215/501 (42%), Gaps = 78/501 (15%)
Query: 41 LVVEGEIPSWLNGTYLRNG------PGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAG 94
L V G+IPS L G Y+RNG P H HLFDG M+ V + ++
Sbjct: 117 LEVVGQIPSCLKGVYIRNGANPMFPPLAGH-------HLFDGDGMIHAVSIGFDNQVSYS 169
Query: 95 HRQIETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLF-----SGASLTDN---- 145
R +T + SV PKP L LA+L +G L D
Sbjct: 170 CRYTKTNRLVQETALGR------SVFPKPIGELHGHSGLARLALFTARAGIGLVDGTRGM 223
Query: 146 --ANNGIYKLGDGRIICLTETQKG-SVIVDPD-TLDTLGKFEYSDPLGGFIQSSHPIV-- 199
AN G+ +GR++ ++E V +D L+T+G+F + D + + +HP V
Sbjct: 224 GVANAGVVFF-NGRLLAMSEDDLPYQVKIDGQGDLETIGRFGFDDQIDSSV-IAHPKVDA 281
Query: 200 TDDEFLTLLPDLLNPGYL--VVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVV 257
T + TL ++L +L + G R V + P P +H F +TE++VV+
Sbjct: 282 TTGDLHTLSYNVLKKPHLRYLKFNTCGKKTRDVEITL-----PEPTMIHDFAITENFVVI 336
Query: 258 PEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKA--SGKIAASVEVPLYMVFHFI 315
P+ + + + +++ +Y E+ A V+ K +G V+VP FH
Sbjct: 337 PDQQMVFKLSEMIRGGSPVIYV----KEKMARFGVLSKQDLTGSDINWVDVPDCFCFHLW 392
Query: 316 NAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTIPFDG 375
NA+EE+ ++G + V+ C DT E+ G+ + R +
Sbjct: 393 NAWEERTEEGDPVIVVIGSCMSPPDTIFSES----------GEPTRVELSEIRLNMRTKE 442
Query: 376 SQFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQK 435
S + T G ++ IN +Y+G+K ++ Y I P + + K+D+ +
Sbjct: 443 SNRKVIVT-------GVNLEAGHINRSYVGRKSQFVY-IAIADPWPKCSGIAKVDI---Q 491
Query: 436 AKNWCEEGIVPS----EPLFVARPGATDEDDGVVISMI--SEKNGGAYVVLLDGSTFEEI 489
E PS EP FV G +ED G V+ + EK+ +VV +D + +++
Sbjct: 492 NGTVSEFNYGPSRFGGEPCFVPE-GEGEEDKGYVMGFVRDEEKDESEFVV-VDATDMKQV 549
Query: 490 ARARFPFGLPYGFHGCWVPEN 510
A R P +PYGFHG +V EN
Sbjct: 550 AAVRLPERVPYGFHGTFVSEN 570
>sp|O49675|CCD4_ARATH Probable carotenoid cleavage dioxygenase 4, chloroplastic
OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1
Length = 595
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 209/505 (41%), Gaps = 79/505 (15%)
Query: 42 VVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAML--VKVHFEKNGRLIAGHRQIE 99
++ G +P LNG Y+RNGP + + HLFDG ML +K+H NG+ R ++
Sbjct: 129 IIHGTLPLSLNGAYIRNGPNPQFLPRGPY-HLFDGDGMLHAIKIH---NGKATLCSRYVK 184
Query: 100 TEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDG--- 156
T Y K+ P+ F + G A + GA G Y +G
Sbjct: 185 TYKYNVEKQTGAPVM--------PNVFSGFNGVTASVARGALTAARVLTGQYNPVNGIGL 236
Query: 157 ----------RIICLTETQKGSVI--VDPDTLDTLGKFEYSDPLGGFIQSSHPIV--TDD 202
R+ L E+ + + ++T+G++++ L ++HP
Sbjct: 237 ANTSLAFFSNRLFALGESDLPYAVRLTESGDIETIGRYDFDGKLA-MSMTAHPKTDPITG 295
Query: 203 EFLTLLPDLLNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPL 262
E + P R + +++ + + +P ++H F +T+ + + E+ L
Sbjct: 296 ETFAFRYGPVPPFLTYFRFDSAGKKQRDVPIFSMT---SPSFLHDFAITKRHAIFAEIQL 352
Query: 263 --QYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAAS--VEVPLYMVFHFINAY 318
+ ++ L+ S + + R L V+ K +G + EVP + + H INA+
Sbjct: 353 GMRMNMLDLVLEGGSPVGTDNGKTPR---LGVIPKYAGDESEMKWFEVPGFNIIHAINAW 409
Query: 319 EEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTIPFDGSQF 378
+E D G + +IA +I TL +L + V D G
Sbjct: 410 DEDD--GNSVVLIAPNI-----MSIEHTLERMDLVHALVEKVKIDLVTG----------- 451
Query: 379 GKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYA-IGAKRPCNFPNSLTKLDLVKQK-- 435
V R +D INPA+LG+ RY YA IG P + + KLD+ K
Sbjct: 452 ----IVRRHPISARNLDFAVINPAFLGRCSRYVYAAIGDPMPKI--SGVVKLDVSKGDRD 505
Query: 436 ----AKNWCEEGIVPSEPLFVAR-PG--ATDEDDGVVISMI-SEKNGGAYVVLLDGST-- 485
A+ G EP FVAR PG +EDDG V++ + E G + +++D +
Sbjct: 506 DCTVARRMYGSGCYGGEPFFVARDPGNPEAEEDDGYVVTYVHDEVTGESKFLVMDAKSPE 565
Query: 486 FEEIARARFPFGLPYGFHGCWVPEN 510
E +A R P +PYGFHG +V E+
Sbjct: 566 LEIVAAVRLPRRVPYGFHGLFVKES 590
>sp|Q9C6Z1|NCED5_ARATH Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1
Length = 589
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 209/508 (41%), Gaps = 61/508 (12%)
Query: 23 HRNHVAWTSVKQERWEGELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVK 82
H+ + V ++ + L V+G+IP ++G YLRNG + HLFDG M+
Sbjct: 111 HQISGNYAPVPEQSVKSSLSVDGKIPDCIDGVYLRNGANPL-FEPVSGHHLFDGDGMVHA 169
Query: 83 VHFEKNGRLIAGHRQIETEAYKAAKKNKKLCYRE-----FSVSPKPDNFLAYVGELAKLF 137
V NG R ETE K+ + + S L Y L L
Sbjct: 170 VKI-TNGDASYSCRFTETERLVQEKQLGSPIFPKAIGELHGHSGIARLMLFYARGLFGLL 228
Query: 138 SGASLTDNANNGIYKLGDGRIICLTETQ--KGSVIVDPDTLDTLGKFEYSDPLGGFIQSS 195
+ + T AN G+ D R++ ++E + D L+T+G+F++ L + +
Sbjct: 229 NHKNGTGVANAGLVYFHD-RLLAMSEDDLPYQVRVTDNGDLETIGRFDFDGQLSSAM-IA 286
Query: 196 HPIV--TDDEFLTLLPDLLNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEH 253
HP + E L D++ YL E+ + +P +H F +TE+
Sbjct: 287 HPKIDPVTKELFALSYDVVKKPYLKYFKFSPEGEKSPDVEIPLA---SPTMMHDFAITEN 343
Query: 254 YVVVPEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAASVEVPLYMVFH 313
+VV+P+ + + + + + Y E + R L K + ++ VE P FH
Sbjct: 344 FVVIPDQQVVFKLSDMFLGKSPVKYDGE-KISRFGILPRNAKDASEMVW-VESPETFCFH 401
Query: 314 FINAYEEKDKDGRVIAVIADC----------CEHNADTTIIET-LSLKNLRSFHGQDVLP 362
NA+E + D + VI C C+ ++ + E L+LK +S
Sbjct: 402 LWNAWESPETDE--VVVIGSCMTPADSIFNECDEQLNSVLSEIRLNLKTGKS-------- 451
Query: 363 DARVGRFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNF 422
R IP GS LE M +N LG+K RYAY + P
Sbjct: 452 ---TRRTIIP--GSVQMNLEAGM-------------VNRNLLGRKTRYAY-LAIAEPWPK 492
Query: 423 PNSLTKLDLVKQKAKNWCEEG-IVPSEPLFVARPGATD-EDDGVVISMI-SEKNGGAYVV 479
+ K+DL + KN G EP F+ R +D EDDG ++S + E++ + +
Sbjct: 493 VSGFAKVDLSTGEVKNHFYGGKKYGGEPFFLPRGLESDGEDDGYIMSFVHDEESWESELH 552
Query: 480 LLDGSTFEEIARARFPFGLPYGFHGCWV 507
+++ T E A + P +PYGFHG +V
Sbjct: 553 IVNAVTLELEATVKLPSRVPYGFHGTFV 580
>sp|O65572|CCD1_ARATH Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis
thaliana GN=CCD1 PE=1 SV=2
Length = 538
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 207/508 (40%), Gaps = 80/508 (15%)
Query: 40 ELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIE 99
+L V G +P LNG ++R GP + H FDG M+ V K+G+ R ++
Sbjct: 64 DLPVHGFLPECLNGEFVRVGPNPKFDAVAGY-HWFDGDGMIHGVRI-KDGKATYVSRYVK 121
Query: 100 T------EAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNA-NNGIYK 152
T E + AAK K + F F + + +L + + DN NG
Sbjct: 122 TSRLKQEEFFGAAKFMKIGDLKGF--------FGLLMVNVQQLRTKLKILDNTYGNGTAN 173
Query: 153 LG----DGRIICLTETQKGSVI--VDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLT 206
G+++ L E K VI ++ L TLG +Y L ++HP V
Sbjct: 174 TALVYHHGKLLALQEADKPYVIKVLEDGDLQTLGIIDYDKRLTHSF-TAHPKVD-----P 227
Query: 207 LLPDLLNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWV------HSFTMTEHYVVVPEM 260
+ ++ GY P +VI + P P + H F +TE Y + ++
Sbjct: 228 VTGEMFTFGY---SHTPPYLTYRVISKDGIMHDPVPITISEPIMMHDFAITETYAIFMDL 284
Query: 261 PLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGK--IAASVEVPLYMVFHFINAY 318
P+ + + ++K E +Y F+ P +KA V+ + + + E+P +FH NA+
Sbjct: 285 PMHFRPKEMVK-EKKMIYSFD--PTKKARFGVLPRYAKDELMIRWFELPNCFIFHNANAW 341
Query: 319 EEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTIPFDGSQF 378
EE+D+ V+ C N D ++ + L +F G ++ RF + +
Sbjct: 342 EEEDE-----VVLITCRLENPDLDMVSGKVKEKLENF-GNELYE----MRFNMKTGSASQ 391
Query: 379 GKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFPNSLTKLDL--VKQKA 436
KL VD IN Y GKK RY Y + K DL +
Sbjct: 392 KKLS--------ASAVDFPRINECYTGKKQRYVYGTILDSIAKV-TGIIKFDLHAEAETG 442
Query: 437 KNWCE------------EGIVPSEPLFVARPGATDEDDGVVISMISEKNGG-AYVVLLDG 483
K E EG SE ++V R A +EDDG +I + ++N G + V ++D
Sbjct: 443 KRMLEVGGNIKGIYDLGEGRYGSEAIYVPRETA-EEDDGYLIFFVHDENTGKSCVTVIDA 501
Query: 484 STF--EEIARARFPFGLPYGFHGCWVPE 509
T E +A P +PYGFH +V E
Sbjct: 502 KTMSAEPVAVVELPHRVPYGFHALFVTE 529
>sp|O24592|NCED1_MAIZE 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays
GN=VP14 PE=1 SV=2
Length = 604
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 215/499 (43%), Gaps = 73/499 (14%)
Query: 40 ELVVEGEIPSWLNGTYLRNG------PGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIA 93
EL V G IP +++G Y RNG P H HLFDG M+ +
Sbjct: 138 ELPVSGRIPPFIDGVYARNGANPCFDPVAGH-------HLFDGDGMVHALRIRNGAAESY 190
Query: 94 GHRQIETEAYKAAKKNKKLCYREFSVSPKPDNFL---AYVGELAKLFSGAS--LTD-NAN 147
R ET + + + V PK L + + LA ++ A+ L D +A
Sbjct: 191 ACRFTETARLRQERAIGR------PVFPKAIGELHGHSGIARLALFYARAACGLVDPSAG 244
Query: 148 NGIYKLG----DGRIICLTETQ--KGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIV-- 199
G+ G +GR++ ++E + D L+T+G++++ LG + +HP +
Sbjct: 245 TGVANAGLVYFNGRLLAMSEDDLPYHVRVADDGDLETVGRYDFDGQLGCAM-IAHPKLDP 303
Query: 200 TDDEFLTLLPDLLNPGYL-VVRMEP-GTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVV 257
E L D++ YL P GT V + P +H F +TE+ VVV
Sbjct: 304 ATGELHALSYDVIKRPYLKYFYFRPDGTKSDDVEIPLE-----QPTMIHDFAITENLVVV 358
Query: 258 PEMPLQYSVQSLLK-AEPSALYQFEWRPERKAFLHVVCK--ASGKIAASVEVPLYMVFHF 314
P+ + + +Q +L+ P L + E+ + V+ K A A V+VP FH
Sbjct: 359 PDHQVVFKLQEMLRGGSPVVLDK-----EKTSRFGVLPKHAADASEMAWVDVPDCFCFHL 413
Query: 315 INAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTIPFD 374
NA+E+ + G V V+ C AD+ E S + L S + L DAR GR T
Sbjct: 414 WNAWED-EATGEV--VVIGSCMTPADSIFNE--SDERLESVLTEIRL-DARTGRST---- 463
Query: 375 GSQFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFPNSLTKLDL-VK 433
V+ P + +++ +N LG++ RYAY + P + K+DL
Sbjct: 464 ------RRAVLPPSQQ-VNLEVGMVNRNLLGRETRYAY-LAVAEPWPKVSGFAKVDLSTG 515
Query: 434 QKAKNWCEEGIVPSEPLFVAR-PGATD---EDDGVVISMI-SEKNGGAYVVLLDGSTFEE 488
+ K EG EP FV P A EDDG V++ + E+ G + +++++ +
Sbjct: 516 ELTKFEYGEGRFGGEPCFVPMDPAAAHPRGEDDGYVLTFVHDERAGTSELLVVNAADMRL 575
Query: 489 IARARFPFGLPYGFHGCWV 507
A + P +P+GFHG ++
Sbjct: 576 EATVQLPSRVPFGFHGTFI 594
>sp|Q9LRR7|NCED3_ARATH 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic
OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1
Length = 599
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 217/498 (43%), Gaps = 54/498 (10%)
Query: 29 WTSVKQERWEGELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKN 88
+ V ++ L V G++P + G Y+RNG H H FDG M+ V FE
Sbjct: 127 FAPVNEQPVRRNLPVVGKLPDSIKGVYVRNGANPLH-EPVTGHHFFDGDGMVHAVKFEHG 185
Query: 89 GRLIAGHRQIETEAYKAAKKNKKLCYREFS--VSPKPDNFLAYVGELAKLF-----SGAS 141
+ A + + N+ + R+ V PK L +A+L + A
Sbjct: 186 S---------ASYACRFTQTNRFVQERQLGRPVFPKAIGELHGHTGIARLMLFYARAAAG 236
Query: 142 LTDNAN-NGIYKLG----DGRIICLTETQ-KGSVIVDPD-TLDTLGKFEYSDPLGGFIQS 194
+ D A+ G+ G +GR++ ++E V + P+ L T+G+F++ L +
Sbjct: 237 IVDPAHGTGVANAGLVYFNGRLLAMSEDDLPYQVQITPNGDLKTVGRFDFDGQLESTM-I 295
Query: 195 SHPIVTDD--EFLTLLPDLLNPGYL-VVRMEP-GTNERKVIGRVNCRGGPAPGWVHSFTM 250
+HP V + E L D+++ YL R P GT V +++ P +H F +
Sbjct: 296 AHPKVDPESGELFALSYDVVSKPYLKYFRFSPDGTKSPDVEIQLD-----QPTMMHDFAI 350
Query: 251 TEHYVVVPEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAASVEVPLYM 310
TE++VVVP+ + + + +++ +Y + + R L + S I ++ P
Sbjct: 351 TENFVVVPDQQVVFKLPEMIRGGSPVVYD-KNKVARFGILDKYAEDSSNIKW-IDAPDCF 408
Query: 311 VFHFINAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFT 370
FH NA+EE + D V+ C D+ E S +NL+S VL + R+ T
Sbjct: 409 CFHLWNAWEEPETDE---VVVIGSCMTPPDSIFNE--SDENLKS-----VLSEIRLNLKT 458
Query: 371 IPFDGSQFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFPNSLTKLD 430
G + ++ E+ ++ +N LG+K ++AY + P + K+D
Sbjct: 459 ----GESTRR--PIISNEDQQVNLEAGMVNRNMLGRKTKFAY-LALAEPWPKVSGFAKVD 511
Query: 431 LVK-QKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKNGGAYVVLLDGSTFEEI 489
L + K+ + EPLF+ G +++ ++ + EK + + +++ + E
Sbjct: 512 LTTGEVKKHLYGDNRYGGEPLFLPGEGGEEDEGYILCFVHDEKTWKSELQIVNAVSLEVE 571
Query: 490 ARARFPFGLPYGFHGCWV 507
A + P +PYGFHG ++
Sbjct: 572 ATVKLPSRVPYGFHGTFI 589
>sp|Q9M9F5|NCED9_ARATH 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic
OS=Arabidopsis thaliana GN=NCED9 PE=2 SV=1
Length = 657
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 121/503 (24%), Positives = 202/503 (40%), Gaps = 91/503 (18%)
Query: 41 LVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIET 100
L V G +P + G Y+RNG H + HLFDG M+ V F+ NG + R ET
Sbjct: 199 LPVTGTVPECIQGVYVRNGANPLH-KPVSGHHLFDGDGMVHAVRFD-NGSVSYACRFTET 256
Query: 101 EAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGD----- 155
++ C R V PK +GEL A L G++ L D
Sbjct: 257 NRLVQERE----CGR--PVFPKA------IGELHGHLGIAKLMLFNTRGLFGLVDPTGGL 304
Query: 156 -----------GRIICLTE---------TQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSS 195
G ++ ++E TQ G L+T G++++ L + +
Sbjct: 305 GVANAGLVYFNGHLLAMSEDDLPYHVKVTQTGD-------LETSGRYDFDGQLKSTM-IA 356
Query: 196 HPIVTDD--EFLTLLPDLLNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEH 253
HP + + E L D+++ YL E+ + P +H F +TE+
Sbjct: 357 HPKIDPETRELFALSYDVVSKPYLKYFRFTSDGEKSPDVEIPLD---QPTMIHDFAITEN 413
Query: 254 YVVVPEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAASVEVPLYMVFH 313
+VV+P+ + + + +++ +Y E + R L+ K + I +EVP FH
Sbjct: 414 FVVIPDQQVVFRLPEMIRGGSPVVYD-EKKKSRFGILNKNAKDASSIQW-IEVPDCFCFH 471
Query: 314 FINAYEEKDKDGRVIAVIADCCE------HNADTTIIETLSLKNLRSFHGQDVLPDARVG 367
N++EE + D + VI C + D T+ LS ++ + + G
Sbjct: 472 LWNSWEEPETDE--VVVIGSCMTPPDSIFNEHDETLQSVLS----------EIRLNLKTG 519
Query: 368 RFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFPNSLT 427
T S+ LE M +N LG+K RYAY + P +
Sbjct: 520 ESTRRPVISEQVNLEAGM-------------VNRNLLGRKTRYAY-LALTEPWPKVSGFA 565
Query: 428 KLDLVKQKAKNWCE-EGIVPSEPLFVARPGATDEDDG--VVISMISEKNGGAYVVLLDGS 484
K+DL + + + EG EPLF+ P E+DG +++ + E+ + + L++
Sbjct: 566 KVDLSTGEIRKYIYGEGKYGGEPLFL--PSGDGEEDGGYIMVFVHDEEKVKSELQLINAV 623
Query: 485 TFEEIARARFPFGLPYGFHGCWV 507
+ A P +PYGFHG ++
Sbjct: 624 NMKLEATVTLPSRVPYGFHGTFI 646
>sp|Q84KG5|CCD_CROSA Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus
GN=CCD PE=1 SV=1
Length = 546
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 126/517 (24%), Positives = 203/517 (39%), Gaps = 95/517 (18%)
Query: 40 ELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIE 99
+L V G +P LNG ++R GP + + H FDG M+ + K+G+ R ++
Sbjct: 68 DLPVRGHLPECLNGEFVRVGPNPKFMPVAGY-HWFDGDGMIHGMRI-KDGKATYASRYVK 125
Query: 100 TEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGD---- 155
T +L E+ PK +G+L F + K+ D
Sbjct: 126 TS---------RLKQEEYFEGPK----FMKIGDLKGFFGLFMVQMQLLRAKLKVIDVSYG 172
Query: 156 ------------GRIICLTETQKGSVI--VDPDTLDTLGKFEYSDPLGGFIQSSHPIVT- 200
G+++ L+E K V+ ++ L TLG +Y L ++HP V
Sbjct: 173 VGTGNTALIYHHGKLLALSEADKPYVVKVLEDGDLQTLGLLDYDKRLSHSF-TAHPKVDP 231
Query: 201 -DDEFLTLLPDLLNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWV------HSFTMTEH 253
DE T GY P +VI + P P + H F +TE+
Sbjct: 232 FTDEMFTF-------GY---AHTPPYVTYRVISKDGVMRDPVPITIPASVMMHDFAITEN 281
Query: 254 YVVVPEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKAS--GKIAASVEVPLYMV 311
Y + ++PL + + ++K F + +KA V+ + + + E+P +
Sbjct: 282 YSIFMDLPLYFQPKEMVKG---GKLIFSFDATKKARFGVLPRYAKDDSLIRWFELPNCFI 338
Query: 312 FHFINAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTI 371
FH NA+EE D+ V+ C N D ++ + L +F + L + R T
Sbjct: 339 FHNANAWEEGDE-----VVLITCRLENPDLDMVNGAVKEKLENFKNE--LYEMRFNMKT- 390
Query: 372 PFDGSQFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFPNSLTKLDL 431
G+ K +V VD IN +Y +K RY Y + K DL
Sbjct: 391 ---GAASQKQLSV-------SAVDFPRINESYTTRKQRYVYGTILDNITKV-KGIIKFDL 439
Query: 432 VK--QKAKNWCE-----EGIVP-------SEPLFVARPGA--TDEDDGVVISMISEKN-G 474
+ K E +GI SE +FV R ++EDDG +I + ++N G
Sbjct: 440 HAEPEAGKKKLEVGGNVQGIFDLGPGRYGSEAVFVPRERGIKSEEDDGYLIFFVHDENTG 499
Query: 475 GAYVVLLDGSTF--EEIARARFPFGLPYGFHGCWVPE 509
+ V ++D T E +A P +PYGFH +V E
Sbjct: 500 KSEVNVIDAKTMSAEPVAVVELPNRVPYGFHAFFVNE 536
>sp|Q9M6E8|NCED1_PHAVU 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus
vulgaris GN=NCED1 PE=2 SV=1
Length = 615
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 120/523 (22%), Positives = 218/523 (41%), Gaps = 59/523 (11%)
Query: 5 VASHQSPASVPERESCAEHRNHVA--WTSVKQERWEGELVVEGEIPSWLNGTYLRNG--- 59
+ SH+S +P+ A+ + +A + V + + L V G+IP ++G Y+RNG
Sbjct: 123 LVSHESKHPLPK---TADPKVQIAGNFAPVPEHAADQALPVVGKIPKCIDGVYVRNGANP 179
Query: 60 ---PGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEAYKAAKKNKKLCYRE 116
P H H FDG M+ V F NG R ET+ K + + +
Sbjct: 180 LYEPVAGH-------HFFDGDGMVHAVKF-TNGAASYACRFTETQRLAQEKSLGRPVFPK 231
Query: 117 -----FSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLTETQ--KGSV 169
S L Y L +L G+ AN G+ + ++ ++E
Sbjct: 232 AIGELHGHSGIARLLLFYARSLFQLVDGSHGMGVANAGLVYFNN-HLLAMSEDDLPYHVR 290
Query: 170 IVDPDTLDTLGKFEYSDPLGGFIQSSHPIV--TDDEFLTLLPDLLNPGYLVVRMEPGTNE 227
I L T+G+++++ L + +HP + + + L D++ YL
Sbjct: 291 ITSNGDLTTVGRYDFNGQLNSTM-IAHPKLDPVNGDLHALSYDVVQKPYLKYFRFSADGV 349
Query: 228 RKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLKAEPSALYQFEWRPERK 287
+ + + P +H F +TE++VVVP+ + + + ++ +Y + + R
Sbjct: 350 KSPDVEIPLK---EPTMMHDFAITENFVVVPDQQVVFKLTEMITGGSPVVYD-KNKTSRF 405
Query: 288 AFLHVVCKASGKIAASVEVPLYMVFHFINAYEEKDKDGRVIAVIADCCEHNADTTIIET- 346
L K + + ++ P FH NA+EE + D I VI C AD+ E
Sbjct: 406 GILDKNAKDANAMRW-IDAPECFCFHLWNAWEEPETDE--IVVIGSCMT-PADSIFNECD 461
Query: 347 LSLKNLRSFHGQDVLPDARVGRFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPAYLGK 406
SLK++ S ++ + R G+ T + + D E+ M +N LG+
Sbjct: 462 ESLKSVLS----EIRLNLRTGKST---------RRPIISDAEQVNLEAGM--VNRNKLGR 506
Query: 407 KYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCE-EGIVPSEPLFVARPGATDEDDGVV 465
K ++AY + P + K+DL + + + E EPLF+ P +E DG +
Sbjct: 507 KTQFAY-LALAEPWPKVSGFAKVDLFSGEVQKYMYGEEKFGGEPLFL--PNGEEEGDGYI 563
Query: 466 ISMI-SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFHGCWV 507
++ + EK + + +++ + A + P +PYGFHG ++
Sbjct: 564 LAFVHDEKEWKSELQIVNAQNLKLEASIKLPSRVPYGFHGTFI 606
>sp|O49505|NCED2_ARATH 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1
Length = 583
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 122/532 (22%), Positives = 218/532 (40%), Gaps = 67/532 (12%)
Query: 5 VASHQSPASVPERESCAEHRNHVA--WTSVKQERWEGELVVEGEIPSWLNGTYLRNG--- 59
+ SH+ + +P+ A+ R +A ++ V + L VEG IP ++G Y+RNG
Sbjct: 87 LISHEQDSPLPK---TADPRVQIAGNYSPVPESSVRRNLTVEGTIPDCIDGVYIRNGANP 143
Query: 60 ---PGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEAYKAAKKNKKLCYRE 116
P H HLFDG M+ V NG R +TE K+ + + +
Sbjct: 144 MFEPTAGH-------HLFDGDGMVHAVKI-TNGSASYACRFTKTERLVQEKRLGRPVFPK 195
Query: 117 -----FSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLTETQ--KGSV 169
S L Y L L + + AN G+ + R++ ++E
Sbjct: 196 AIGELHGHSGIARLMLFYARGLCGLINNQNGVGVANAGLVYFNN-RLLAMSEDDLPYQLK 254
Query: 170 IVDPDTLDTLGKFEYSDPLGGFIQSSHPIV--TDDEFLTLLPDLLNPGYL-VVRMEP-GT 225
I L T+G++++ L + +HP + E L D++ YL R P G
Sbjct: 255 ITQTGDLQTVGRYDFDGQLKSAM-IAHPKLDPVTKELHALSYDVVKKPYLKYFRFSPDGV 313
Query: 226 NERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYSVQSLLKAEPSALYQFEWRPE 285
++ + P +H F +TE++VV+P+ + + + ++ + ++ E
Sbjct: 314 KSPELEIPLE-----TPTMIHDFAITENFVVIPDQQVVFKLGEMISGKSPVVFD----GE 364
Query: 286 RKAFLHVVCKASGKIAASVEV--PLYMVFHFINAYEEKDKDGRVIAVIADCCEHNADTTI 343
+ + L ++ K + + + + V P FH NA+E + + I VI C AD
Sbjct: 365 KVSRLGIMPKDATEASQIIWVNSPETFCFHLWNAWESPETEE--IVVIGSCMSP-AD--- 418
Query: 344 IETLSLKNLRSFHGQDVLPDARVGRFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPAY 403
S+ N R + VL + R+ T E V +++ +N
Sbjct: 419 ----SIFNERDESLRSVLSEIRINLRTRKTTRRSLLVNEDV--------NLEIGMVNRNR 466
Query: 404 LGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEG-IVPSEPLFV---ARPGATD 459
LG+K R+A+ + P + K+DL + K + G EP F+ + G +
Sbjct: 467 LGRKTRFAF-LAIAYPWPKVSGFAKVDLCTGEMKKYIYGGEKYGGEPFFLPGNSGNGEEN 525
Query: 460 EDDGVVISMI-SEKNGGAYVVLLDGSTFEEIARARFPFGLPYGFHGCWVPEN 510
EDDG + + E+ + + +++ + A + P +PYGFHG +V N
Sbjct: 526 EDDGYIFCHVHDEETKTSELQIINAVNLKLEATIKLPSRVPYGFHGTFVDSN 577
>sp|Q53353|LSDX1_PSEPA Lignostilbene-alpha,beta-dioxygenase isozyme I OS=Pseudomonas
paucimobilis PE=1 SV=1
Length = 485
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 194/506 (38%), Gaps = 71/506 (14%)
Query: 31 SVKQERWEGELV---VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEK 87
+++ R EG+++ +EGE+P LNGT+ R P F F+G M+ F
Sbjct: 13 TLRPLRIEGDILDIEIEGEVPPQLNGTFHRVHPDAQFPPRFEDDQFFNGDGMVSLFRFH- 71
Query: 88 NGRLIAGHRQIETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNAN 147
+G++ R +T+ +K +K K F AY L S +
Sbjct: 72 DGKIDFRQRYAQTDKWKVERKAGKSL------------FGAYRNPLTDDASVQGMIRGTA 119
Query: 148 NGIYKLGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPI---VTDD-- 202
N + G++ + E +I+DP TL+T G + L +HP VT +
Sbjct: 120 NTNVMVHAGKLYAMKEDSP-CLIMDPLTLETEGYTNFDGKLQSQTFCAHPKIDPVTGNLC 178
Query: 203 EFLTLLPDLLNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPL 262
F L+ + + P K I N P +H F +TE Y V MPL
Sbjct: 179 AFAYGAKGLMTLDMAYIEISPTGKLLKEIPFQN----PYYCMMHDFGVTEDYAVFAVMPL 234
Query: 263 QYSVQSLLKAEPSALYQFEWRPERKAFLHVVCK-ASGKIAASVEVPLYMVFHFINAYEEK 321
S L + P F + +L ++ + + + V H +NA+
Sbjct: 235 LSSWDRLEQRLPF----FGFDTTLPCYLGILPRNGDARDLRWFKTGNCFVGHVMNAF--- 287
Query: 322 DKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVG---RFTIPF--DGS 376
DG + + +N+ HG P A G R+T+ +G
Sbjct: 288 -NDGTKVHIDMPVSRNNSFPFF----------DVHGAPFDPVAGQGFLTRWTVDMASNGD 336
Query: 377 QFGKLETVMD-PEEHGRGVDMCSINPAYLGKKYRYAYAI--GAKRPCNFP--------NS 425
F K E + D P+E R I+ Y + YR+ + + ++P P N+
Sbjct: 337 SFEKTERLFDRPDEFPR------IDERYATRAYRHGWMLILDTEKPYEAPGGAFYALTNT 390
Query: 426 LTKLDLVKQKAKNW-CEEGIVPSEPLFVARPGATDEDDGVVISMISEKNGG-AYVVLLDG 483
L +DL K+ +W EP F+ R E DG VI+++ + + + + D
Sbjct: 391 LGHIDLATGKSSSWWAGPRCAIQEPCFIPRSPDAPEGDGYVIALVDDHVANYSDLAIFDA 450
Query: 484 STFEE--IARARFPFGLPYGFHGCWV 507
++ IARA+ P + G HG W
Sbjct: 451 QHVDQGPIARAKLPVRIRQGLHGNWA 476
>sp|Q94IR2|CCD1_PHAVU Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus
vulgaris GN=CCD1 PE=1 SV=1
Length = 543
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 206/505 (40%), Gaps = 71/505 (14%)
Query: 40 ELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIE 99
+L V+G +P LNG ++R GP + H FDG M+ + K+G+ R +E
Sbjct: 66 DLPVKGHLPDCLNGEFVRVGPNPKFAPVAGY-HWFDGDGMIHGLRI-KDGKATYVSRFVE 123
Query: 100 T-----EAYKAAKKNKKLCYRE--FSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYK 152
T E Y K K+ + F + + L ++ L G T+ A +Y
Sbjct: 124 TSRLKQEEYFGRSKFMKIGDLKGLFGLLMVNIHMLRTKLKVLDLSYGGGTTNTAL--VYH 181
Query: 153 LGDGRIICLTETQKGSVI--VDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPD 210
G+++ L+E K I + L TLG +Y LG ++HP V D F +
Sbjct: 182 --HGKLLALSEADKPYAIKVFEDGDLQTLGMLDYDKRLGHSF-TAHPKV--DPFTG---E 233
Query: 211 LLNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWV------HSFTMTEHYVVVPEMPLQY 264
+ + GY P +VI + P P + H F +TE+Y V ++PL +
Sbjct: 234 MFSFGY---AHTPPYITYRVISKDGYMHDPVPITISDPIMMHDFAITENYAVFMDLPLIF 290
Query: 265 SVQSLLKAEPSALYQFE-WRPERKAFLHVVCKASGKIAASVEVPLYMVFHFINAYEEKDK 323
+ ++K + + ++ F+ + R L K I E+P +FH NA+EE+D+
Sbjct: 291 RPKEMVKNK-TLIFSFDSTKKARFGVLPRYAKDEQHIRW-FELPNCFIFHNANAWEEEDE 348
Query: 324 DGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTIPFDGSQFGKLET 383
V+ C N + + L +F + RF + + KL
Sbjct: 349 -----VVLITCRLQNPKLDNVGGTVQEKLENFSNE-----LYEMRFNMKTGEASQKKLS- 397
Query: 384 VMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQ--KAKNWCE 441
VD +N Y G+K RY Y + K DL + K E
Sbjct: 398 -------ASTVDFPRVNENYTGRKQRYVYGTTLDSIAKV-TGIIKFDLHAEPDHGKEKLE 449
Query: 442 ------------EGIVPSEPLFVAR-PG-ATDEDDGVVISMISEKNGG-AYVVLLDGSTF 486
G SE +++ R PG ++EDDG ++ + ++N G ++V ++D T
Sbjct: 450 VGGNVQGLYDLGPGKFGSEAVYIPRVPGIESEEDDGYLVLFVHDENAGKSFVHVIDAKTM 509
Query: 487 --EEIARARFPFGLPYGFHGCWVPE 509
+ +A P +PYGFH +V E
Sbjct: 510 SADPVAVVELPNRVPYGFHAFFVTE 534
>sp|Q8LP17|CCD1_PEA Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum
GN=CCD1 PE=2 SV=1
Length = 541
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 123/516 (23%), Positives = 201/516 (38%), Gaps = 91/516 (17%)
Query: 40 ELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIE 99
+L V+G +P LNG ++R GP + H FDG M+ + K+G+ R ++
Sbjct: 64 DLTVQGHLPDCLNGEFVRVGPNPKFSPVAGY-HWFDGDGMIHGLRI-KDGKASYVSRFVK 121
Query: 100 TEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGD---- 155
T +K E+ K +G+L LF + K+ D
Sbjct: 122 TSRFKQ---------EEYFNGSK----FMKIGDLKGLFGLLMVNMQMLRAKLKILDVSYG 168
Query: 156 ------------GRIICLTETQKGSVI--VDPDTLDTLGKFEYSDPLGGFIQSSHPIVTD 201
+++ L+E K I + L TLG +Y LG ++HP V
Sbjct: 169 HGTANTALVYHHQKLLALSEGDKPYAIKVFEDGDLQTLGMLDYDKRLGHNF-TAHPKV-- 225
Query: 202 DEFLTLLPDLLNPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWV------HSFTMTEHYV 255
D F ++ GY P R VI + P P + H F +TE+Y
Sbjct: 226 DPFTG---EMFTFGY--SHTAPYVTYR-VISKDGFMQDPVPITISDPVMMHDFAITENYS 279
Query: 256 VVPEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKAS--GKIAASVEVPLYMVFH 313
+ ++PL + + ++K + F + +KA V+ + + K E+P +FH
Sbjct: 280 IFMDLPLYFRPKEMVK---NKTLIFSFDSTKKARFGVLPRYAKDDKHIRWFELPNCFIFH 336
Query: 314 FINAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTIPF 373
NA+EE+D+ V+ C N + ++ + L +F + RF +
Sbjct: 337 NANAWEEEDE-----IVLITCRLENPNLDVVGGAVKEKLDNFSNE-----LYEMRFNMKT 386
Query: 374 DGSQFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCNFPNSLTKLDLVK 433
+ KL VD +N +Y G+K RY Y + K DL
Sbjct: 387 GEASQKKLS--------ASTVDFPRVNESYTGRKQRYVYGTTLDSIAKV-TGIIKFDLHA 437
Query: 434 Q--KAKNWCE------------EGIVPSEPLFVARPGATD--EDDGVVISMISEKN-GGA 476
+ K E G SE ++V R TD EDDG +I + ++N G +
Sbjct: 438 EPDSGKTKLEVGGNVQGLYDLGPGRFGSEAVYVPRVPGTDSEEDDGYLIFFVHDENTGKS 497
Query: 477 YVVLLDGSTF--EEIARARFPFGLPYGFHGCWVPEN 510
+V ++D E +A P +PYGFH +V E+
Sbjct: 498 FVHVIDAKRMSAEPVAVVELPQRVPYGFHAFFVTED 533
>sp|O06785|CCO_MYCTU Carotenoid cleavage oxygenase OS=Mycobacterium tuberculosis
GN=Rv0654 PE=1 SV=1
Length = 501
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 124/531 (23%), Positives = 196/531 (36%), Gaps = 106/531 (19%)
Query: 32 VKQERWEGELVVEGEIPSWLNGTYLRNGPG-VWHIGEFNFGHLFDGYAMLVKVHFEKNGR 90
V E +L V G IP L+G YLRNGP V + + H F G AM+ V
Sbjct: 21 VSTEVTATDLPVTGRIPEHLDGRYLRNGPNPVAEVDPATY-HWFTGDAMVHGVALRDGKA 79
Query: 91 LIAGHRQIETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGI 150
+R + T A AA S P P + G + + A
Sbjct: 80 RWYRNRWVRTPAVCAALGEP------ISARPHPRTGIIEGGPNTNVLTHA---------- 123
Query: 151 YKLGDGRIICLTETQKGSVIVD-PDTLDTLGKFEYSDPL-GGFIQSSHPIVTDDEF-LTL 207
GR + L E G V + D LDT+G ++ L GG+ ++HP L
Sbjct: 124 -----GRTLALVEA--GVVNYELTDELDTVGPCDFDGTLHGGY--TAHPQRDPHTGELHA 174
Query: 208 LPDLLNPGYLVVRMEPGTN--ERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQYS 265
+ G+ V GT+ R+ + + G P +HSF++T++YVV+ ++P+ +
Sbjct: 175 VSYSFARGHRVQYSVIGTDGHARRTVD-IEVAGSPM---MHSFSLTDNYVVIYDLPVTFD 230
Query: 266 VQSLLKA-------EPSAL----------------------------YQFEWRPERKAFL 290
++ A P+ L + W P A +
Sbjct: 231 PMQVVPASVPRWLQRPARLVIQSVLGRVRIPDPIAALGNRMQGHSDRLPYAWNPSYPARV 290
Query: 291 HVVCKASGKIAAS-VEVPLYMVFHFINAYEEKDKDGRVIAVIADCCEHNADTTIIETLSL 349
V+ + G ++ V+H +NAY E C + A+ +++ +
Sbjct: 291 GVMPREGGNEDVRWFDIEPCYVYHPLNAYSE--------------CRNGAEVLVLDVVRY 336
Query: 350 KNL----RSFHGQDVLPDARVGRFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPAYLG 405
+ R G D P + R+TI V R + IN +G
Sbjct: 337 SRMFDRDRRGPGGDSRPS--LDRWTINL------ATGAVTAECRDDRAQEFPRINETLVG 388
Query: 406 KKYRYAYAIGAK------RPCNFPNSLTKLDLVKQKAK-NWCEEGIVPSEPLFVARPGAT 458
+R+AY +G + L K D V + + ++ E +FV P A
Sbjct: 389 GPHRFAYTVGIEGGFLVGAGAALSTPLYKQDCVTGSSTVASLDPDLLIGEMVFVPNPSAR 448
Query: 459 DEDDGVVISMISEKNGG-AYVVLLDGSTFEEIARARFPFGLPYGFHGCWVP 508
EDDG+++ + ++LLD T E IA P +P GFHG W P
Sbjct: 449 AEDDGILMGYGWHRGRDEGQLLLLDAQTLESIATVHLPQRVPMGFHGNWAP 499
>sp|Q52008|LSDX3_PSEPA Lignostilbene-alpha,beta-dioxygenase isozyme III OS=Pseudomonas
paucimobilis GN=lsdB PE=1 SV=1
Length = 490
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 116/510 (22%), Positives = 190/510 (37%), Gaps = 84/510 (16%)
Query: 36 RWEGELV---VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLI 92
R EG+++ VEGEIP+ L+GT+ R P F F+G M+ F +G++
Sbjct: 18 RIEGDILDLEVEGEIPAQLDGTFHRVHPDAQFPPRFEDDQFFNGDGMVSLFRFH-DGKID 76
Query: 93 AGHRQIETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYK 152
R +T+ +K +K K F AY L S + N
Sbjct: 77 FRQRYAQTDKWKVERKAGKSL------------FGAYRNPLTDDASVQGMIRGTANTNVM 124
Query: 153 LGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSH----PIVTDD-EFLTL 207
+ G++ + E +I+DP TL+T G + L S+H P+ + F
Sbjct: 125 VHAGKLYAMKEDSP-CLIMDPLTLETEGYTNFDGKLKNQTFSAHAKIDPVTGNFCNFGYA 183
Query: 208 LPDLLNPGYLVVRMEPGTN---ERKVIGRVNCRGGPAPGWVHSFTMTEHYVVVPEMPLQY 264
LL ++P N E + C +H + +TEHY + +P
Sbjct: 184 ATGLLTTDCSYFEIDPAGNLLFETEFQVPYYCM-------MHDYGLTEHYAIFHIVPCSP 236
Query: 265 SVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAASV---EVP-LYMVFHFINAYEE 320
+ L P F + +L VV + G V + P H +NA+EE
Sbjct: 237 NWDRLKAGLP----HFGFDTTLPVWLGVVPRGPGVTNKDVRWFKAPKTIFASHVMNAFEE 292
Query: 321 KDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDAR---VGRFTIPF---- 373
K + DT E + HG P A + R+T+
Sbjct: 293 GSK-------------IHFDTPQAENNAFPFFPDIHGAPFDPVAARPYLHRWTVDLGSNS 339
Query: 374 -DGSQFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAI----------GAKRPCNF 422
D ++ +L + +D + ++ Y+G+ YR+ + + R F
Sbjct: 340 EDFAEVRQLTSWID--------EFPRVDARYVGQPYRHGWGLVMDPEMEMEFARGRASGF 391
Query: 423 P-NSLTKLDLVKQKAKNW-CEEGIVPSEPLFVARPGATDEDDGVVISMISEK-NGGAYVV 479
N + D K +W C + EP FV R + E DG +I+++ + +V
Sbjct: 392 KMNRIGHWDHATGKEDSWWCGPQSIIQEPCFVPRMADSAEGDGYIIALVDNLITNYSDLV 451
Query: 480 LLDGSTFEE--IARARFPFGLPYGFHGCWV 507
+LD ++ I RA+ P L G HG W
Sbjct: 452 VLDALNLKDGPIGRAKLPIRLRSGLHGNWA 481
>sp|Q84K96|ZCD_CROSA Zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromoplast OS=Crocus
sativus GN=ZCD PE=1 SV=1
Length = 369
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 115/280 (41%), Gaps = 37/280 (13%)
Query: 242 PGWVHSFTMTEHYVVVPEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIA 301
P +VH F +TEHY V P++ + +++ E P R L + ++
Sbjct: 108 PSFVHDFAITEHYAVFPDIQIVMKPAEIVRGRRMIGPDLEKVP-RLGLLPRYATSDSEMR 166
Query: 302 ASVEVPLYMVFHFINAYEEKDKDGRVIAVIADCCEHNADTTIIETLSLKNLRSFHGQDVL 361
+VP + + H +NA+EE + G V+ ++A + I+ L ++ + L
Sbjct: 167 W-FDVPGFNMVHVVNAWEE--EGGEVVVIVAPNVSPIENA--IDRFDLLHVSVEMARIEL 221
Query: 362 PDARVGRFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPAYLGKKYRYAYAIGAKRPCN 421
V R + + FG I+ Y G+K RYAY +G P
Sbjct: 222 KSGSVSRTLLSAENLDFG------------------VIHRGYSGRKSRYAY-LGVGDPMP 262
Query: 422 FPNSLTKLDLVKQK------AKNWCEEGIVPSEPLFV---ARPGATDEDDGVVISMI-SE 471
+ K+D A+ G EP FV ++ +EDDG V+S + E
Sbjct: 263 KIRGVVKVDFELAGRGECVVARREFGVGCFGGEPFFVPASSKKSGGEEDDGYVVSYLHDE 322
Query: 472 KNGGAYVVLLDGST--FEEIARARFPFGLPYGFHGCWVPE 509
G + V++D + E +A P +PYGFHG +V E
Sbjct: 323 GKGESSFVVMDARSPELEILAEVVLPRRVPYGFHGLFVTE 362
>sp|Q7XJM2|CCD7_ARATH Carotenoid cleavage dioxygenase 7, chloroplastic OS=Arabidopsis
thaliana GN=CCD7 PE=1 SV=1
Length = 618
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 43 VEGEIP-SWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIA-GHRQIET 100
+EG IP ++ +GTY GPG++ + H DG+ L H + N R + ++T
Sbjct: 81 IEGSIPVNFPSGTYYLAGPGLFTDDHGSTVHPLDGHGYLRAFHIDGNKRKATFTAKYVKT 140
Query: 101 EAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDN-ANNGIYKLGDGRII 159
EA K +R P F G K F + N AN + K GR++
Sbjct: 141 EAKKEEHDPVTDTWRFTHRGP----FSVLKG--GKRFGNTKVMKNVANTSVLKWA-GRLL 193
Query: 160 CLTETQKGSVIVDPDTLDTLGKF 182
CL E + I + +LDT+G+F
Sbjct: 194 CLWEGGEPYEI-ESGSLDTVGRF 215
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 16/131 (12%)
Query: 395 DMCSINPAYLGKKYRYAYAIGAK----RPCNFP-NSLTKLDLVKQKAKNWCEEGI-VPSE 448
D IN ++ GKK +Y Y+ + +FP + + K DL + W E
Sbjct: 488 DFPVINSSWSGKKNKYMYSAASSGTRSELPHFPFDMVVKFDLDSNLVRTWSTGARRFVGE 547
Query: 449 PLFVARPGATDEDDG----VVISMISEKNGGAYVVLLDGSTFEE----IARARFPFGL-- 498
P+FV + + ++ +V+ + Y+V+LD E ++R P L
Sbjct: 548 PMFVPKNSVEEGEEEDDGYIVVVEYAVSVERCYLVILDAKKIGESDAVVSRLEVPRNLTF 607
Query: 499 PYGFHGCWVPE 509
P GFHG W +
Sbjct: 608 PMGFHGLWASD 618
>sp|B8G187|HOA_DESHD 4-hydroxy-2-oxovalerate aldolase OS=Desulfitobacterium hafniense
(strain DCB-2 / DSM 10664) GN=Dhaf_1245 PE=3 SV=1
Length = 333
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 403 YLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDD 462
+L K++ YA R C +T++D+ +Q K + G++P L A G D
Sbjct: 95 HLAKEFGAKYA----RMCT---QITEVDIAEQHIKMAKQLGMIPIAVLPCA--GIIPVKD 145
Query: 463 GVVISMISEKNGGAYVVLLDG-------STFEEIARARFPFGLPYGFHG 504
V + ++E G + LLDG T+E IA + +P GFHG
Sbjct: 146 TVRYTQMAESYGAEVIYLLDGGGYQLPEQTYERIAAMKKAVDVPIGFHG 194
>sp|Q8DUW2|AROB_STRMU 3-dehydroquinate synthase OS=Streptococcus mutans serotype c
(strain ATCC 700610 / UA159) GN=aroB PE=3 SV=1
Length = 355
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 162 TETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDL 211
T TQ V++DPDTL+TLGK E + +G I+ + ++ D E +L DL
Sbjct: 156 TFTQPDGVLIDPDTLNTLGKRELIEGMGEVIK--YGLIADVELWEILKDL 203
>sp|Q9CES8|AROB_LACLA 3-dehydroquinate synthase OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=aroB PE=3 SV=1
Length = 356
Score = 37.0 bits (84), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 162 TETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDL 211
T TQ V++DP+ L TLG+ E+ + LG I+ + ++ D + LL DL
Sbjct: 156 TFTQPDGVLIDPEVLQTLGQREFREGLGEVIKCA--LIADKDLWNLLTDL 203
>sp|A2RMH5|AROB_LACLM 3-dehydroquinate synthase OS=Lactococcus lactis subsp. cremoris
(strain MG1363) GN=aroB PE=3 SV=1
Length = 356
Score = 36.6 bits (83), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 162 TETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDL 211
T TQ V++DP+ L TLG+ E+ + LG I+ + ++ D + LL DL
Sbjct: 156 TFTQPDGVLIDPEVLKTLGQREFCEGLGEVIKCA--LIADKDLWNLLTDL 203
>sp|Q02XB8|AROB_LACLS 3-dehydroquinate synthase OS=Lactococcus lactis subsp. cremoris
(strain SK11) GN=aroB PE=3 SV=1
Length = 356
Score = 35.8 bits (81), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 162 TETQKGSVIVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDL 211
T TQ V++DP+ L TLG+ E+ + LG I+ + ++ D LL DL
Sbjct: 156 TFTQPDGVLIDPEVLKTLGQREFCEGLGEVIKCA--LIADKALWNLLTDL 203
>sp|Q03LH4|AROB_STRTD 3-dehydroquinate synthase OS=Streptococcus thermophilus (strain
ATCC BAA-491 / LMD-9) GN=aroB PE=3 SV=1
Length = 355
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 24/162 (14%)
Query: 72 HLFDGYAMLVKVHFEKNGRLIAGHRQIETEAYKAAKK-NKKLCYREFSVSPKPDNFLAY- 129
H+ YA VK+ E G + +E EA K K NK + + + D +A
Sbjct: 44 HVGGLYAEKVKLSLEHEGFEVVVFNFLEGEASKNLKTVNKAYEFLIKNGMTRSDGIVALG 103
Query: 130 ---VGELAKLFSGA------------SLTDNANNGIY-KLG----DGRIICLTETQKGSV 169
VG+LA + SLT ++ I K G + I T Q V
Sbjct: 104 GGVVGDLAGFVASTYMRGIHFVQVPTSLTAQVDSSIGGKTGVNTPSAKNIVGTFAQPDGV 163
Query: 170 IVDPDTLDTLGKFEYSDPLGGFIQSSHPIVTDDEFLTLLPDL 211
++DP+ L+TLGK E + +G ++ + ++ D E LL ++
Sbjct: 164 LIDPNVLETLGKRELIEGMGEVVK--YGLIDDPELWQLLDNI 203
>sp|A2R1F6|MSH3_ASPNC DNA mismatch repair protein msh3 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=msh3 PE=3 SV=2
Length = 1119
Score = 32.7 bits (73), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 55/138 (39%), Gaps = 44/138 (31%)
Query: 82 KVHFEKNGRLIAGH-----RQIETEAYKAAKKNKKLCYREFSVSPKPDNFLAYVGELAKL 136
++H + AGH RQIET A KAA N+ +P +V +L L
Sbjct: 281 RLHVHVKRLVAAGHKVGVVRQIETAALKAAGDNRN--------AP-------FVRKLTNL 325
Query: 137 FSGASLTDNAN---------NGIYKLGDGRIICLTET-----------QKGSVIVDPDTL 176
++ + D+A +G G ++C+TET Q G V V P T
Sbjct: 326 YTKGTYIDDAEGLGGPMPAASGGASPATGYLLCITETNAKGWGNDEKVQVGIVAVQPAT- 384
Query: 177 DTLGKFEYSDPLGGFIQS 194
G Y D GF++S
Sbjct: 385 ---GDIVYDDFEDGFMRS 399
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 212,559,881
Number of Sequences: 539616
Number of extensions: 9775331
Number of successful extensions: 19284
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 19084
Number of HSP's gapped (non-prelim): 63
length of query: 510
length of database: 191,569,459
effective HSP length: 122
effective length of query: 388
effective length of database: 125,736,307
effective search space: 48785687116
effective search space used: 48785687116
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)