Query 010461
Match_columns 510
No_of_seqs 125 out of 1099
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 07:18:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010461.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010461hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kvc_A Retinoid isomerohydrola 100.0 1E-114 4E-119 936.8 39.9 472 25-509 12-533 (533)
2 2biw_A Apocarotenoid-cleaving 100.0 2E-113 5E-118 919.0 41.5 455 22-509 17-490 (490)
3 3npe_A 9-CIS-epoxycarotenoid d 100.0 3E-109 1E-113 890.5 44.7 455 23-509 46-521 (529)
4 3c75_H MADH, methylamine dehyd 41.3 58 0.002 33.2 7.8 78 409-495 85-168 (426)
5 3mbr_X Glutamine cyclotransfer 40.0 75 0.0026 29.8 7.7 22 474-495 122-143 (243)
6 2mad_H Methylamine dehydrogena 37.2 1.8E+02 0.0062 28.5 10.6 78 409-495 33-116 (373)
7 3nol_A Glutamine cyclotransfer 36.4 2.8E+02 0.0095 26.2 13.7 36 150-186 92-127 (262)
8 3nol_A Glutamine cyclotransfer 33.1 90 0.0031 29.6 7.1 22 474-495 144-165 (262)
9 2iwa_A Glutamine cyclotransfer 28.3 1.6E+02 0.0055 27.8 8.0 71 410-495 33-105 (266)
10 1qks_A Cytochrome CD1 nitrite 22.4 2.8E+02 0.0095 29.1 9.3 76 408-495 208-285 (567)
11 3mbr_X Glutamine cyclotransfer 22.2 1.8E+02 0.006 27.2 6.9 25 409-438 75-99 (243)
12 2iwa_A Glutamine cyclotransfer 21.2 2.9E+02 0.0099 26.0 8.3 69 410-495 77-145 (266)
13 3euj_B Chromosome partition pr 20.8 21 0.00071 30.4 0.0 34 19-52 17-57 (152)
14 2oiz_A Aromatic amine dehydrog 20.1 3E+02 0.01 26.4 8.5 79 409-495 16-100 (361)
No 1
>3kvc_A Retinoid isomerohydrolase; 7-bladed beta-propeller, monotopic membrane protein, sensory transduction, vision, isomerase, non-heme iron protein; 1.90A {Bos taurus} PDB: 3fsn_A 4f2z_A 4f30_A 4f3a_A 4f3d_A
Probab=100.00 E-value=1.1e-114 Score=936.79 Aligned_cols=472 Identities=30% Similarity=0.503 Sum_probs=385.2
Q ss_pred cCcCccccceeeeeeeeEEEecCCCCCceEEEEECCCCCCCCCccccccCCccccEEEEEEeeCCeEEEeeeccCcHHHH
Q 010461 25 NHVAWTSVKQERWEGELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRLIAGHRQIETEAYK 104 (510)
Q Consensus 25 ~~~~~~~~~~E~~~~~l~V~G~iP~~L~Gt~~RnGP~~~~~g~~~~~H~FDGdGmv~~~~f~~dG~v~y~~R~V~T~~~~ 104 (510)
....|+|+.|+....+|+|+|+||+||+|||||||||++++|+.+++||||||||||+|+|+ ||+|+|+||||||++|+
T Consensus 12 ~~~~f~~~~E~~~p~~l~V~G~IP~~L~Gtl~RNGPg~~~~g~~~~~HwFDGdGmlh~~~~~-~G~v~y~~R~v~T~~~~ 90 (533)
T 3kvc_A 12 YKKLFETVEELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFK-EGHVTYHRRFIRTDAYV 90 (533)
T ss_dssp GGGGGSCCCCCSSCEECEEEECCCTTCCEEEEEEEECCCEETTEECCBTTTSCEEEEEEEEE-TTEEEEEEEECCCHHHH
T ss_pred hhhhcCcccccCCceeeeEEeeCCCCCceEEEEeCCCccccCCcccccccCCCCEEEEEEEe-CCEEEEEEEEecCHHHH
Confidence 45678988877777899999999999999999999999999888899999999999999999 99999999999999999
Q ss_pred HHHHcCCcccccccCCCCCcchHHHHHHHhhhccCCCcCCccceeEEEeCCCeEEEeecCCCceeEeCCCCCceeccccc
Q 010461 105 AAKKNKKLCYREFSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLTETQKGSVIVDPDTLDTLGKFEY 184 (510)
Q Consensus 105 ~e~~ag~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~aNt~v~~~~~grllAl~E~g~~p~~lDp~TLeT~g~~~~ 184 (510)
+|+++||++|++||+...++++.+.+..+.+.+.....+|+|||||++|+ ||||||||++ .||+|||+||||+|.++|
T Consensus 91 ~e~~agr~~~~~fg~~~~~~p~~~~~~~~~~~~~~~~~~~~ANt~v~~~~-g~LlAl~E~~-~p~~iDp~tLeT~G~~d~ 168 (533)
T 3kvc_A 91 RAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPVG-EDYYACTETN-FITKVNPETLETIKQVDL 168 (533)
T ss_dssp HHHHHTSCCSCBTTBCC-------------------CCCCCCCSEEEEET-TEEEEECSSS-EEEEECTTTCCEEEEEEH
T ss_pred HHHHcCCcceeccCcccCCcchhhHHHHHHHhhccCCCCCCCEEEEEEEC-CEEEEEEcCC-cCEEeChHHccccccccc
Confidence 99999999999999875555554444433444433356899999999997 8999999998 699999999999999999
Q ss_pred CCCCCccccCCCCccCCC-CceecccCCCC---CcEEEEEEcCCC-------CceeEEEEEecCCCCCCccceeeeecCc
Q 010461 185 SDPLGGFIQSSHPIVTDD-EFLTLLPDLLN---PGYLVVRMEPGT-------NERKVIGRVNCRGGPAPGWVHSFTMTEH 253 (510)
Q Consensus 185 ~~~l~~~~~tAHPk~dp~-e~~~~~~~~~~---~~~~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~iHDf~vTen 253 (510)
++.|++..||||||+||. |+++|++...+ +.|.++++++.. .+..++.++++.+++.|+|||||+||||
T Consensus 169 ~g~l~~~~~tAHPk~DptGel~~fg~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~p~~iHDFaiTen 248 (533)
T 3kvc_A 169 CNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKIPPLQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPN 248 (533)
T ss_dssp HHHSSCSCCCSCCEECTTSCEEEEEEECC---CCEEEEEEECCCCTTCCCGGGGCEEEEEEECSSTTCCBCCCCCEECSS
T ss_pred CCccCCCccCCCCccCCCCCEEEEeeccCCCCCcEEEEEEECccccccccccccceeEEeeccccCCCCceeeeeeecCC
Confidence 999987789999999999 99999987653 568999987441 1234567888777789999999999999
Q ss_pred EEEEecCCccccHHHHhcc----CCCccceeeecCCCCeEEEEEeCCCCce-eEEEEcCCceeEeeeceeeccCCCCceE
Q 010461 254 YVVVPEMPLQYSVQSLLKA----EPSALYQFEWRPERKAFLHVVCKASGKI-AASVEVPLYMVFHFINAYEEKDKDGRVI 328 (510)
Q Consensus 254 y~V~~~~P~~~~~~~~~~g----~~~~~~~~~w~~~~~t~~~VIpR~~~~~-v~~~~~~~~f~fH~~NayE~~~~~g~~~ 328 (510)
|+||+++|+++|+.++++| +.+.+++|.|+|++++||+||||++++. ++||++++||+||++|||||++
T Consensus 249 y~Vf~~~P~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~tr~~VipR~~~~~~~~~~~~~~~f~fH~~NA~Ee~~------ 322 (533)
T 3kvc_A 249 YIVFVETPVKINLFKFLSSWSLWGANYMDCFESNETMGVWLHIADKKRKKYINNKYRTSPFNLFHHINTYEDHE------ 322 (533)
T ss_dssp EEEEEECSEEEC-----------CCCSGGGEEECSSCCEEEEEEETTTTEEEEEEEEECCEEEEEEEEEEEETT------
T ss_pred EEEEEeCCeEEcHHHHhhcccccCCChHHheeecCCCCcEEEEEECCCCCcccEEEEeCCeeEEeeeeeEEeCC------
Confidence 9999999999999999887 5666789999999999999999998875 4899999999999999999754
Q ss_pred EEEecccccCCchhHHhhhhhcccccCC-C----CCCCCCcceEEEEEecCCCC-------------Ccc----------
Q 010461 329 AVIADCCEHNADTTIIETLSLKNLRSFH-G----QDVLPDARVGRFTIPFDGSQ-------------FGK---------- 380 (510)
Q Consensus 329 ~iv~D~~~~~~~~~~~~~~~~~~l~~~~-~----~~~~~~~~l~R~~idl~~~~-------------~~~---------- 380 (510)
+||+|+|+|+..+++++.+++++++... . ....+.++|+||+|||+++. +++
T Consensus 323 ~Iv~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~R~~l~l~~~~~~~~~nl~~~~~~~~~a~~~~~~~~~ 402 (533)
T 3kvc_A 323 FLIVDLCCWKGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRRYVLPLNIDKADTGKNLVTLPNTTATAILCSDETIW 402 (533)
T ss_dssp EEEEEEEEEESSSCGGGGCBHHHHTSCHHHHHHHHTTSCEEEEEEEEEESCCCGGGTTSBCCCCTTCCCEEEECTTSEEE
T ss_pred EEEEEEeeeCCchhhhhhhhhhhhcccchhccccccccCCceEEEEEEeCCcccccccccccccccccceeeeccCCcee
Confidence 7999999999326677666666665310 0 01235679999999998641 010
Q ss_pred e-eeecCCCCcCC-cccCCccCC-CCCCCCcceeEEecccCCCCCCCeEEEEeccCCCeeEEecCCccCCccEEeeCCCC
Q 010461 381 L-ETVMDPEEHGR-GVDMCSINP-AYLGKKYRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGA 457 (510)
Q Consensus 381 ~-~~~l~~~~~~~-~~EfP~in~-~~~g~~yry~y~~~~~~~~~~~~~lvk~D~~tg~~~~w~~~~~~~~EPvFVPrp~~ 457 (510)
+ ++.++. .+. ++|||+||+ ++.||+|||+|+++... ..+++|+|+|++||+.+.|+++++++|||+|||||++
T Consensus 403 ~~~~~l~~--~~~~~~EfP~In~~~~~Gr~~Ry~Y~~~~~~--~~~~~l~K~D~~tg~~~~w~~~~~~~~EPiFVPrp~~ 478 (533)
T 3kvc_A 403 LEPEVLFS--GPRQAFEFPQINYQKYGGKPYTYAYGLGLNH--FVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDA 478 (533)
T ss_dssp EECEEEEC--BTTEEEEEEECCHHHHTTSCCCEEEEEEEET--TEEEEEEEEETTTCCEEEECCTTCBCCCCEEEECTTC
T ss_pred eeeeeecc--CCcccccCceECHHHhCCCcccEEEEeccCC--CCCceeEEEEcCCCCEEEEeCCCccccCceeecCCCC
Confidence 0 112210 125 799999999 79999999999987653 4579999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEEEcCC---CceEEEEEecCCccceEEEEcCCCCCCCcccccccC
Q 010461 458 TDEDDGVVISMISEKN---GGAYVVLLDGSTFEEIARARFPFGLPYGFHGCWVPE 509 (510)
Q Consensus 458 ~~EDDG~Ll~~v~d~~---~~S~L~VlDA~~l~~vAr~~lP~~iP~GfHG~w~~~ 509 (510)
++|||||||++|+|.. ++|+|+||||++|++|||++||++||+||||+|+++
T Consensus 479 ~~EDDG~lLs~V~d~~~~~~~s~LlILDA~~l~~vArv~lP~rvP~GfHG~w~~~ 533 (533)
T 3kvc_A 479 LEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVTFHGLFKKS 533 (533)
T ss_dssp CSTTCEEEEEEEECCSTTSCSEEEEEEETTTCCEEEEEEESSCCCCCCEEEEEEC
T ss_pred CCCCCcEEEEEEEeCCcCCCccEEEEEeCCCChhhEEEEeCCCCCCCccccccCC
Confidence 9999999999999963 568999999999999999999999999999999974
No 2
>2biw_A Apocarotenoid-cleaving oxygenase; non-heme iron, carotenoid cleavage, retinal forma oxidoreductase, dioxygenase; HET: 3ON; 2.39A {Synechocystis SP} PDB: 2bix_A*
Probab=100.00 E-value=1.6e-113 Score=919.01 Aligned_cols=455 Identities=27% Similarity=0.395 Sum_probs=387.3
Q ss_pred ccCcCcCccccceeeeeeeeE-EEecCCCCCceEEEEECCCCCCCCCccccccCCccccEEEEEE-eeCCeEEEeeeccC
Q 010461 22 EHRNHVAWTSVKQERWEGELV-VEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHF-EKNGRLIAGHRQIE 99 (510)
Q Consensus 22 ~~~~~~~~~~~~~E~~~~~l~-V~G~iP~~L~Gt~~RnGP~~~~~g~~~~~H~FDGdGmv~~~~f-~~dG~v~y~~R~V~ 99 (510)
..+|+++|+|+.+|.+. +|. |+|+||+||+|||||||||++++++..+.||||||||||+|+| + +|+|+|+|||||
T Consensus 17 ~~~~~~~f~~~~~E~~~-~l~~V~G~IP~~L~Gt~~RnGP~~~~~~~~~~~H~FDGdGmlh~~~f~~-~G~v~y~~R~v~ 94 (490)
T 2biw_A 17 PQDWLRGYQSQPQEWDY-WVEDVEGSIPPDLQGTLYRNGPGLLEIGDRPLKHPFDGDGMVTAFKFPG-DGRVHFQSKFVR 94 (490)
T ss_dssp HHHHHHTTSCCCSCEEE-ECCCEEECCCTTCCEEEEECCBCCSEETTEECSSGGGSCBEEEEEEECS-SSCCEEEEEECC
T ss_pred ccchhhhccCccccCCc-ccceEEeCCCCCCCeEEEEeCCCcCcCCCCcccCccCCCCeEEEEEECC-CCEEEEEcceEe
Confidence 36899999999999855 577 9999999999999999999999988889999999999999999 8 999999999999
Q ss_pred cHHHHHHHHcCCccccc-ccCCCCCcchHHHHHHHhhhccCCCcCCccceeEEEeCCCeEEEeecCCCceeEeCCCCCce
Q 010461 100 TEAYKAAKKNKKLCYRE-FSVSPKPDNFLAYVGELAKLFSGASLTDNANNGIYKLGDGRIICLTETQKGSVIVDPDTLDT 178 (510)
Q Consensus 100 T~~~~~e~~ag~~~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~aNt~v~~~~~grllAl~E~g~~p~~lDp~TLeT 178 (510)
|++|++|+++||++|++ ||+...++. +.+ .+ ....+|+|||||++|+ ||||||||++ .||+|||.||||
T Consensus 95 T~~~~~e~~ag~~~~~~~fg~~~~~~~-~~~------~~-~~~~~~~aNT~v~~~~-g~llAl~E~~-~p~~ldp~tLeT 164 (490)
T 2biw_A 95 TQGYVEEQKAGKMIYRGVFGSQPAGGW-LKT------IF-DLRLKNIANTNITYWG-DRLLALWEGG-QPHRLEPSNLAT 164 (490)
T ss_dssp CHHHHHHHHHTSCCSBCTTSCCCSSTH-HHH------TT-CCCBCCCCCSEEEEET-TEEEEECTTS-CCEEECTTTCCE
T ss_pred CHHHHHHHHhCCcccccccccCCCCch-hhh------hc-ccccCCCCEEEEEEEC-CEEEEEEcCC-CCEecccccccE
Confidence 99999999999999999 998653332 221 12 2346899999999997 8999999998 599999999999
Q ss_pred ecccccCCCC-CccccCCCCccCCC--------CceecccCCCCCc-EEEEEEcCCCCceeEEEEEecCCCCCCccceee
Q 010461 179 LGKFEYSDPL-GGFIQSSHPIVTDD--------EFLTLLPDLLNPG-YLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSF 248 (510)
Q Consensus 179 ~g~~~~~~~l-~~~~~tAHPk~dp~--------e~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~iHDf 248 (510)
+|.++|++.| ++..||||||+||. ||++|++...++. |.++++++.... .....+. ++.++|||||
T Consensus 165 ~G~~d~~g~l~~~~~~tAHPk~Dp~~~~~~gtgel~~fg~~~~~~~~~~~~~~~~~G~~-~~~~~~~---~~~~~~~HDf 240 (490)
T 2biw_A 165 IGLDDLGGILAEGQPLSAHPRIDPASTFDGGQPCYVTFSIKSSLSSTLTLLELDPQGKL-LRQKTET---FPGFAFIHDF 240 (490)
T ss_dssp EEECCTTTTSCTTCCCCSCCEEESSCTTTTTCCEEEEEEEEESSEEEEEEEEECTTSCE-EEEEEEE---EESCCCCCCC
T ss_pred eeeeccCCcccCCcccccCceECccccccCCCCeEEEEEecCCCCcEEEEEEECCCCCE-EeeEEEe---CCCCceEeee
Confidence 9999999999 77789999999997 7999998765443 678888865332 2222333 4688999999
Q ss_pred eecCcEEEEecCCccccHHHHhccCCCccceeeecCCCCeEEEEEeCCCCceeEEEEcCCceeEeeeceeeccCCCCceE
Q 010461 249 TMTEHYVVVPEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASGKIAASVEVPLYMVFHFINAYEEKDKDGRVI 328 (510)
Q Consensus 249 ~vTeny~V~~~~P~~~~~~~~~~g~~~~~~~~~w~~~~~t~~~VIpR~~~~~v~~~~~~~~f~fH~~NayE~~~~~g~~~ 328 (510)
+|||||+||+++|+++++.+++.|.++..+++.|+|++++||+||||+ ++.|+||++|+||+||++|||||++
T Consensus 241 aiTeny~V~~~~P~~~~~~~~~~g~~~~~~~~~~~p~~~tr~~VipR~-~~~v~~f~~~~~f~fH~~NA~Ee~~------ 313 (490)
T 2biw_A 241 AITPHYAIFLQNNVTLNGLPYLFGLRGAGECVQFHPDKPAQIILVPRD-GGEIKRIPVQAGFVFHHANAFEENG------ 313 (490)
T ss_dssp EECSSEEEEEECCEEECCHHHHTTSSCGGGGEEECTTSCEEEEEEETT-SCCCEEEEECCCEEEEEEEEEEETT------
T ss_pred eccCCEEEEEeCCeEEcHHHHhhccCCccceeEeCCCCCcEEEEEECC-CCccEEEecCCCeEEecccceecCC------
Confidence 999999999999999999999988777778999999999999999999 7789999999999999999999854
Q ss_pred EEEecccccCCchhHHhhhhhcccccCCCCCCCCCcceEEEEEecCCCCCcceeeecCCCCcCCcccCCccCCCCCCCCc
Q 010461 329 AVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPAYLGKKY 408 (510)
Q Consensus 329 ~iv~D~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~R~~idl~~~~~~~~~~~l~~~~~~~~~EfP~in~~~~g~~y 408 (510)
+||+|+|+|++ ..++.. +.++... .....++++|+||+|||+++++. ++.+. +.++|||+||+++.||+|
T Consensus 314 ~Iv~d~~~~~~-~~~~~~--~~~~~~~-~~~~~~~~~l~R~~i~l~~g~v~--~~~l~----~~~~EfP~In~~~~G~~~ 383 (490)
T 2biw_A 314 KIILDSICYNS-LPQVDT--DGDFRST-NFDNLDPGQLWRFTIDPAAATVE--KQLMV----SRCCEFPVVHPQQVGRPY 383 (490)
T ss_dssp EEEEEEEEESC-CCCCCT--TCCGGGC-CGGGSCCCEEEEEEEETTTTEEE--EEEEE----CSCEEEEECCGGGTTSCC
T ss_pred eEEEEEeccCC-cccccc--ccccccc-ccccCCCceEEEEEEECCCCceE--EEecc----CCcccccccChhhCCcee
Confidence 79999999984 322211 1111110 11234568999999999976542 33343 468999999999999999
Q ss_pred ceeEEecccC--CCCCCCeEEEEeccCCCeeEEe-cCCccCCccEEeeCCCCCCCCCcEEEEEEEcC-CCceEEEEEecC
Q 010461 409 RYAYAIGAKR--PCNFPNSLTKLDLVKQKAKNWC-EEGIVPSEPLFVARPGATDEDDGVVISMISEK-NGGAYVVLLDGS 484 (510)
Q Consensus 409 ry~y~~~~~~--~~~~~~~lvk~D~~tg~~~~w~-~~~~~~~EPvFVPrp~~~~EDDG~Ll~~v~d~-~~~S~L~VlDA~ 484 (510)
||+|+++... +...+++|+|+|++||+.+.|. +++++++||+|||||++++|||||||++|+|. +++|+|+||||+
T Consensus 384 Ry~Y~~~~~~~~~~~~~~~l~K~D~~tg~~~~~~~g~g~~~~EPvFVPrp~~~~EDDG~ll~~V~d~~~~~S~l~IlDA~ 463 (490)
T 2biw_A 384 RYVYMGAAHHSTGNAPLQAILKVDLESGTETLRSFAPHGFAGEPIFVPRPGGVAEDDGWLLCLIYKADLHRSELVILDAQ 463 (490)
T ss_dssp SEEEEEECSSSSSCCCCCEEEEEETTTTEEEEEECTTTEECCCCEEEECTTCCSTTCEEEEEEEEETTTTEEEEEEEETT
T ss_pred eeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEECCCCccccCCEEecCCCCCCCCCcEEEEEEEeCCCCceeEEEEccC
Confidence 9999987653 3446899999999999999996 69999999999999999999999999999996 689999999999
Q ss_pred Ccc--ceEEEEcCCCCCCCcccccccC
Q 010461 485 TFE--EIARARFPFGLPYGFHGCWVPE 509 (510)
Q Consensus 485 ~l~--~vAr~~lP~~iP~GfHG~w~~~ 509 (510)
+|+ +|||++||++||+||||+|+++
T Consensus 464 ~~~~~pvArv~lP~rvP~GfHG~wv~~ 490 (490)
T 2biw_A 464 DITAPAIATLKLKHHIPYPLHGSWAQT 490 (490)
T ss_dssp CTTSCCSEEEECSSCCCCCCCEEEEEC
T ss_pred CCCcCceEEEeCCCcCCCCccccccCC
Confidence 998 5999999999999999999874
No 3
>3npe_A 9-CIS-epoxycarotenoid dioxygenase 1, chloroplasti; seven blade beta propeller, abscisic acid, non iron, oxidoreductase; 3.20A {Zea mays}
Probab=100.00 E-value=3e-109 Score=890.51 Aligned_cols=455 Identities=23% Similarity=0.379 Sum_probs=373.5
Q ss_pred cCcCcCccccceeeeeeeeEEEecCCCCCceEEEEECCCCCCCCCccccccCCccccEEEEEEeeCCeE-EEeeeccCcH
Q 010461 23 HRNHVAWTSVKQERWEGELVVEGEIPSWLNGTYLRNGPGVWHIGEFNFGHLFDGYAMLVKVHFEKNGRL-IAGHRQIETE 101 (510)
Q Consensus 23 ~~~~~~~~~~~~E~~~~~l~V~G~iP~~L~Gt~~RnGP~~~~~g~~~~~H~FDGdGmv~~~~f~~dG~v-~y~~R~V~T~ 101 (510)
+-++++|+|+++|.+..+|+|+|+||+||+|||||||||+.+. ....+||||||||||+|+|+ ||+| +|+||||||+
T Consensus 46 ~~l~g~fapv~ee~~~~~l~V~G~IP~~L~Gt~~RNGpnP~f~-~~~~~HwFDGdGmlh~~~f~-~G~a~~y~nRfVrT~ 123 (529)
T 3npe_A 46 VQIAGNFAPVGERPPVHELPVSGRIPPFIDGVYARNGANPCFD-PVAGHHLFDGDGMVHALRIR-NGAAESYACRFTETA 123 (529)
T ss_dssp HHTSGGGSCCCCEEEEESCCEEECCCTTCEEEEEECCBCCSSC-CSSCCCGGGSCBEEEEEEEE-TTEEEEEEEEECCCH
T ss_pred chhccCcccccccCCcccceEeecCCccCCceEEEecCCcCcC-CcCCCccCCCCceEEEEEEC-CCccceEEEeEecCH
Confidence 4678999999999888899999999999999999999986432 23568999999999999999 9999 9999999999
Q ss_pred HHHHHHHcCCccccc-ccCCCCCcchHHHHHH-----HhhhccCCCcCCccceeEEEeCCCeEEEeecCCCceeEe--CC
Q 010461 102 AYKAAKKNKKLCYRE-FSVSPKPDNFLAYVGE-----LAKLFSGASLTDNANNGIYKLGDGRIICLTETQKGSVIV--DP 173 (510)
Q Consensus 102 ~~~~e~~ag~~~~~~-f~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~aNt~v~~~~~grllAl~E~g~~p~~l--Dp 173 (510)
+|++|+++||++|++ +++.+ +...+.++.. ..++......+|+|||||++|+ ||||||||++ .||++ ||
T Consensus 124 ~~~~e~~agr~~~~~~~~~~~-~~~~~~r~~~~~~~~~~~~~~~~~~~~~ANtnvv~~~-g~llAl~E~g-~Py~~~idp 200 (529)
T 3npe_A 124 RLRQERAIGRPVFPKAIGELH-GHSGIARLALFYARAACGLVDPSAGTGVANAGLVYFN-GRLLAMSEDD-LPYHVRVAD 200 (529)
T ss_dssp HHHHHHHHTSCCSCCTTTTTT-SSTHHHHHHHHHHHHHTTSCCGGGCCCCCCSCEEEET-TEEEECCTTS-CCEEEEECT
T ss_pred HHHHHHHcCCccccccccccc-ccchhhhhhhhhhhcccccccccccCCCCeEEEEEEC-CEEEEEEcCC-CceEEecCC
Confidence 999999999999987 66654 2223333211 1111111234689999999997 8999999998 59988 99
Q ss_pred C-CCceecccccCCCCCccccCCCCccCCC--CceecccCCC-CCcEEEEEEcCCCCceeEEEEEecCCCCCCccceeee
Q 010461 174 D-TLDTLGKFEYSDPLGGFIQSSHPIVTDD--EFLTLLPDLL-NPGYLVVRMEPGTNERKVIGRVNCRGGPAPGWVHSFT 249 (510)
Q Consensus 174 ~-TLeT~g~~~~~~~l~~~~~tAHPk~dp~--e~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~iHDf~ 249 (510)
+ ||||+|.++|+|.|++ .||||||+||. |+++|++... ++.+.++++++..... ....++ ++.++|||||+
T Consensus 201 ~~tLeT~G~~d~~g~l~~-~~tAHPk~Dp~TGel~~f~y~~~~~p~~~~~~~~~~G~~~-~~~~i~---~~~p~~~HDFa 275 (529)
T 3npe_A 201 DGDLETVGRYDFDGQLGC-AMIAHPKLDPATGELHALSYDVIKRPYLKYFYFRPDGTKS-DDVEIP---LEQPTMIHDFA 275 (529)
T ss_dssp TSCEEEEEECCGGGCCCS-CCCSCCEECTTTCCEEEEECCSSSSCCCEEEEECTTCCBC-CCEECC---CSSCBCCCCCE
T ss_pred CCCcceeeeeccCCccCC-cccccCcCCCCCCcEEEEEeecCCCCcEEEEEECCCCCEE-EEEEEe---CCCCceEeeEE
Confidence 5 9999999999999996 79999999998 9999999875 4667788887554322 234443 67899999999
Q ss_pred ecCcEEEEecCCccccHHHHhccCCCccceeeecCCCCeEEEEEeCCCC--ceeEEEEcCCceeEeeeceeeccCCCCce
Q 010461 250 MTEHYVVVPEMPLQYSVQSLLKAEPSALYQFEWRPERKAFLHVVCKASG--KIAASVEVPLYMVFHFINAYEEKDKDGRV 327 (510)
Q Consensus 250 vTeny~V~~~~P~~~~~~~~~~g~~~~~~~~~w~~~~~t~~~VIpR~~~--~~v~~~~~~~~f~fH~~NayE~~~~~g~~ 327 (510)
|||||+||+++|+++|+.+++.|+. ++.|+|++++||+||||+++ +.|+||++|+||+||++|||||++ +|
T Consensus 276 iTenyvVf~~~Pl~~~~~~~~~g~~----~~~~~p~~~tr~~VipR~~~~~~~vrw~e~~~~f~fH~~NA~Ee~~-~~-- 348 (529)
T 3npe_A 276 ITENLVVVPDHQVVFKLQEMLRGGS----PVVLDAAKTSRFGVLPKHAADASEMAWVDVPDCFCFHLWNAWEDEA-TG-- 348 (529)
T ss_dssp ECSSEEEEEECSEEECGGGGTTTCC----SEEECTTSCCEEEEEETTCSSGGGCEEEECTTCEEEEEEEEEEETT-TT--
T ss_pred ecCCeEEEEeCCeEEcHHHHhCCCC----ceEECCCCCcEEEEEECCCCCCCceEEEEcCCEEEEEecccEecCC-CC--
Confidence 9999999999999999999988754 78999999999999999875 469999999999999999999864 23
Q ss_pred EEEEecccccCCchhHHhhhhhcccccCCCCCCCCCcceEEEEEecCCCCCcceeeecCCCCcCCcccCCccCCCCCCCC
Q 010461 328 IAVIADCCEHNADTTIIETLSLKNLRSFHGQDVLPDARVGRFTIPFDGSQFGKLETVMDPEEHGRGVDMCSINPAYLGKK 407 (510)
Q Consensus 328 ~~iv~D~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~R~~idl~~~~~~~~~~~l~~~~~~~~~EfP~in~~~~g~~ 407 (510)
+||+|.|++.....++.. . ....+++|+||+||+.++++. .+.++++. .+.++|||+||++|.||+
T Consensus 349 -~ivv~~~~~~~~~~~~~~-~----------~~~~~~~l~r~rl~l~~g~~~-~~~l~~~~-~~~~~EfP~In~~~~Gr~ 414 (529)
T 3npe_A 349 -EVVVIGSCMTPADSIFNE-S----------DERLESVLTEIRLDARTGRST-RRAVLPPS-QQVNLEVGMVNRNLLGRE 414 (529)
T ss_dssp -EEEEEEEEECCCCCSCCS-S----------SSCCCCEEEEEEECTTTCCEE-EEESSCSS-SCCCEEEEEECGGGTTSC
T ss_pred -eEEEEEecccCchhhhhc-c----------chhhccceEEEEEcCCCCCEE-eEEecccc-cCccccCceEChhHcCCc
Confidence 567666665422222111 0 112256899999999876542 22233211 136899999999999999
Q ss_pred cceeEEecccCCCCCCCeEEEEeccCCCeeEE-ecCCccCCccEEeeCCC----CCCCCCcEEEEEEEcC-CCceEEEEE
Q 010461 408 YRYAYAIGAKRPCNFPNSLTKLDLVKQKAKNW-CEEGIVPSEPLFVARPG----ATDEDDGVVISMISEK-NGGAYVVLL 481 (510)
Q Consensus 408 yry~y~~~~~~~~~~~~~lvk~D~~tg~~~~w-~~~~~~~~EPvFVPrp~----~~~EDDG~Ll~~v~d~-~~~S~L~Vl 481 (510)
|||+|+++.+ +...+++|+|+|++||+.+.| +++++++|||+|||||+ +++|||||||++|+|. .++|+|+||
T Consensus 415 ~Ry~Y~~~~~-~~~~~~~l~K~D~~tg~~~~~~~g~~~~~~EPvFVPrp~~~~~~~~EDDG~lLs~V~d~~~~~S~LlIL 493 (529)
T 3npe_A 415 TRYAYLAVAE-PWPKVSGFAKVDLSTGELTKFEYGEGRFGGEPCFVPMDPAAAHPRGEDDGYVLTFVHDERAGTSELLVV 493 (529)
T ss_dssp CSEEEEEECC-STTSCCEEEEEETTTCCEEEEECCTTBCCCCCEEEECCSCSSSSCCTTCEEEEEEEEBSSCCCEEEEEE
T ss_pred cceEEEeccC-CCCCcceEEEEecCCCceEEEEcCCCccccCCEeeeCCCCCCCCCCCCCcEEEEEEEECCCCcEEEEEE
Confidence 9999998764 234679999999999998766 58999999999999999 8899999999999996 689999999
Q ss_pred ecCCccceEEEEcCCCCCCCcccccccC
Q 010461 482 DGSTFEEIARARFPFGLPYGFHGCWVPE 509 (510)
Q Consensus 482 DA~~l~~vAr~~lP~~iP~GfHG~w~~~ 509 (510)
||++|++|||++||++||+||||+|+++
T Consensus 494 DA~~l~~vArv~LP~rvP~GfHG~wv~~ 521 (529)
T 3npe_A 494 NAADMRLEATVQLPSRVPFGFHGTFITG 521 (529)
T ss_dssp ETTTTEEEEEEEESSCCCCCSCEEEEEH
T ss_pred eCCCCccceEEECCCCCCCCccccccCH
Confidence 9999999999999999999999999974
No 4
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=41.34 E-value=58 Score=33.20 Aligned_cols=78 Identities=21% Similarity=0.313 Sum_probs=48.7
Q ss_pred ceeEEecccCCCCCCCeEEEEeccCCCeeEEecCCccCCccEEeeCCCCCCCCCcEEEEEEE--cC----CCceEEEEEe
Q 010461 409 RYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMIS--EK----NGGAYVVLLD 482 (510)
Q Consensus 409 ry~y~~~~~~~~~~~~~lvk~D~~tg~~~~w~~~~~~~~EPvFVPrp~~~~EDDG~Ll~~v~--d~----~~~S~L~VlD 482 (510)
+++|.+........ +.|..+|+.|++...-.+-+..+ ...|-| |..+|.+.-. +. +....+.|+|
T Consensus 85 ~~vyV~n~~~~~~~-~~VsVID~~t~~vv~~I~vG~~P-gia~Sp-------Dgk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 85 RRVYIQDPAHFAAI-TQQFVIDGSTGRILGMTDGGFLP-HPVAAE-------DGSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp TEEEEEECTTTCSS-EEEEEEETTTTEEEEEEEECSSC-EEEECT-------TSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CEEEEECCCcCCCC-CeEEEEECCCCEEEEEEECCCCC-ceEECC-------CCCEEEEEeccccccccCCCCCEEEEEE
Confidence 45787654321111 79999999999876544444444 333322 3345554432 11 1235799999
Q ss_pred cCCccceEEEEcC
Q 010461 483 GSTFEEIARARFP 495 (510)
Q Consensus 483 A~~l~~vAr~~lP 495 (510)
+++++.++++.+|
T Consensus 156 ~~t~~vv~~I~v~ 168 (426)
T 3c75_H 156 PVTFLPIADIELP 168 (426)
T ss_dssp TTTCCEEEEEEET
T ss_pred CCCCcEEEEEECC
Confidence 9999999999997
No 5
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=39.98 E-value=75 Score=29.82 Aligned_cols=22 Identities=23% Similarity=0.407 Sum_probs=16.3
Q ss_pred CceEEEEEecCCccceEEEEcC
Q 010461 474 GGAYVVLLDGSTFEEIARARFP 495 (510)
Q Consensus 474 ~~S~L~VlDA~~l~~vAr~~lP 495 (510)
+.+.|.++|+++++.+.++.+-
T Consensus 122 gs~~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 122 GTAVIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp SSSEEEEECTTTCCEEEEEECE
T ss_pred CCCeEEEEeCCCCeEEEEEEEc
Confidence 4667777888777777777765
No 6
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=37.23 E-value=1.8e+02 Score=28.50 Aligned_cols=78 Identities=19% Similarity=0.210 Sum_probs=47.8
Q ss_pred ceeEEecccCCCCCCCeEEEEeccCCCeeEEecCCccCCccEEeeCCCCCCCCCcEEEEEEE--cCC----CceEEEEEe
Q 010461 409 RYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMIS--EKN----GGAYVVLLD 482 (510)
Q Consensus 409 ry~y~~~~~~~~~~~~~lvk~D~~tg~~~~w~~~~~~~~EPvFVPrp~~~~EDDG~Ll~~v~--d~~----~~S~L~VlD 482 (510)
+++|.+........ ..|..+|..+++...-.+.+..+ +..|-| |..+|.+.-. +.. ....+.|+|
T Consensus 33 ~~~yv~~~~~~~~~-~~v~v~D~~t~~~~~~i~~g~~p-~i~~sp-------Dg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 33 RRSYINLPAHHSAI-IQQWVLDAGSGSILGHVNGGFLP-NPVAAH-------SGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred CEEEEeCCcccCCc-cEEEEEECCCCeEEEEecCCCCC-CeEECC-------CCCEEEEEeccccccccCCCCCeEEEEE
Confidence 56887754111000 17899999999876444445444 555554 4445554432 111 124577999
Q ss_pred cCCccceEEEEcC
Q 010461 483 GSTFEEIARARFP 495 (510)
Q Consensus 483 A~~l~~vAr~~lP 495 (510)
+++++.++++.++
T Consensus 104 ~~t~~~~~~i~~~ 116 (373)
T 2mad_H 104 PVTFLPIADIELP 116 (373)
T ss_pred CCCCcEEEEEECC
Confidence 9999999999987
No 7
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=36.43 E-value=2.8e+02 Score=26.15 Aligned_cols=36 Identities=19% Similarity=0.260 Sum_probs=27.5
Q ss_pred EEEeCCCeEEEeecCCCceeEeCCCCCceecccccCC
Q 010461 150 IYKLGDGRIICLTETQKGSVIVDPDTLDTLGKFEYSD 186 (510)
Q Consensus 150 v~~~~~grllAl~E~g~~p~~lDp~TLeT~g~~~~~~ 186 (510)
+...+ ++|+.++.....-+.+|+.||+.++...+.+
T Consensus 92 it~~g-~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~ 127 (262)
T 3nol_A 92 ISDWK-DKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG 127 (262)
T ss_dssp EEEET-TEEEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred EEEeC-CEEEEEEeeCCEEEEEECccCcEEEEEECCC
Confidence 45566 7998886433358999999999999988754
No 8
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=33.09 E-value=90 Score=29.64 Aligned_cols=22 Identities=14% Similarity=0.277 Sum_probs=16.0
Q ss_pred CceEEEEEecCCccceEEEEcC
Q 010461 474 GGAYVVLLDGSTFEEIARARFP 495 (510)
Q Consensus 474 ~~S~L~VlDA~~l~~vAr~~lP 495 (510)
+.+.|.++|+++++.++++.+.
T Consensus 144 Gs~~i~~iDp~T~~v~~~I~V~ 165 (262)
T 3nol_A 144 GTPVLRFLDPESLTPVRTITVT 165 (262)
T ss_dssp SSSEEEEECTTTCSEEEEEECE
T ss_pred CCCeEEEEcCCCCeEEEEEEec
Confidence 4566777777777777777765
No 9
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=28.30 E-value=1.6e+02 Score=27.79 Aligned_cols=71 Identities=11% Similarity=0.053 Sum_probs=40.9
Q ss_pred eeEEecccCCCCCCCeEEEEeccCCCeeEEe--cCCccCCccEEeeCCCCCCCCCcEEEEEEEcCCCceEEEEEecCCcc
Q 010461 410 YAYAIGAKRPCNFPNSLTKLDLVKQKAKNWC--EEGIVPSEPLFVARPGATDEDDGVVISMISEKNGGAYVVLLDGSTFE 487 (510)
Q Consensus 410 y~y~~~~~~~~~~~~~lvk~D~~tg~~~~w~--~~~~~~~EPvFVPrp~~~~EDDG~Ll~~v~d~~~~S~L~VlDA~~l~ 487 (510)
..|.++... .-+.|.++|++||+...-. +.+.+ +|= +.+. ++.|... +. ....+.|+|+++++
T Consensus 33 ~Lyvstg~~---~~s~v~~iD~~tg~v~~~i~l~~~~f-geG-i~~~-------g~~lyv~--t~-~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 33 TLFESTGLY---GRSSVRQVALQTGKVENIHKMDDSYF-GEG-LTLL-------NEKLYQV--VW-LKNIGFIYDRRTLS 97 (266)
T ss_dssp EEEEEECST---TTCEEEEEETTTCCEEEEEECCTTCC-EEE-EEEE-------TTEEEEE--ET-TCSEEEEEETTTTE
T ss_pred eEEEECCCC---CCCEEEEEECCCCCEEEEEecCCCcc-eEE-EEEe-------CCEEEEE--Ee-cCCEEEEEECCCCc
Confidence 577654321 1368999999999976543 23223 221 2221 1222222 11 33568888888888
Q ss_pred ceEEEEcC
Q 010461 488 EIARARFP 495 (510)
Q Consensus 488 ~vAr~~lP 495 (510)
.++++..+
T Consensus 98 v~~~i~~g 105 (266)
T 2iwa_A 98 NIKNFTHQ 105 (266)
T ss_dssp EEEEEECC
T ss_pred EEEEEECC
Confidence 88888776
No 10
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=22.42 E-value=2.8e+02 Score=29.12 Aligned_cols=76 Identities=21% Similarity=0.205 Sum_probs=45.2
Q ss_pred cceeEEecccCCCCCCCeEEEEecc--CCCeeEEecCCccCCccEEeeCCCCCCCCCcEEEEEEEcCCCceEEEEEecCC
Q 010461 408 YRYAYAIGAKRPCNFPNSLTKLDLV--KQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKNGGAYVVLLDGST 485 (510)
Q Consensus 408 yry~y~~~~~~~~~~~~~lvk~D~~--tg~~~~w~~~~~~~~EPvFVPrp~~~~EDDG~Ll~~v~d~~~~S~L~VlDA~~ 485 (510)
-||+|.++. -+.|..+|+. +++...-...+ .+|.-+.=..-..-|..||++.-... ..+.|+|+.+
T Consensus 208 Gr~lyv~~~------dg~V~viD~~~~t~~~v~~i~~G---~~P~~ia~s~~~~pDGk~l~v~n~~~---~~v~ViD~~t 275 (567)
T 1qks_A 208 GRYLFVIGR------DGKVNMIDLWMKEPTTVAEIKIG---SEARSIETSKMEGWEDKYAIAGAYWP---PQYVIMDGET 275 (567)
T ss_dssp SCEEEEEET------TSEEEEEETTSSSCCEEEEEECC---SEEEEEEECCSTTCTTTEEEEEEEET---TEEEEEETTT
T ss_pred CCEEEEEcC------CCeEEEEECCCCCCcEeEEEecC---CCCceeEEccccCCCCCEEEEEEccC---CeEEEEECCC
Confidence 357887652 2579999996 66654322322 33443321000001445887765543 5688999999
Q ss_pred ccceEEEEcC
Q 010461 486 FEEIARARFP 495 (510)
Q Consensus 486 l~~vAr~~lP 495 (510)
++.+.++.+.
T Consensus 276 ~~~~~~i~~~ 285 (567)
T 1qks_A 276 LEPKKIQSTR 285 (567)
T ss_dssp CCEEEEEECC
T ss_pred CcEEEEEecc
Confidence 9998888764
No 11
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=22.19 E-value=1.8e+02 Score=27.19 Aligned_cols=25 Identities=8% Similarity=-0.012 Sum_probs=17.6
Q ss_pred ceeEEecccCCCCCCCeEEEEeccCCCeeE
Q 010461 409 RYAYAIGAKRPCNFPNSLTKLDLVKQKAKN 438 (510)
Q Consensus 409 ry~y~~~~~~~~~~~~~lvk~D~~tg~~~~ 438 (510)
...|.+... -+.+..+|.+|.+...
T Consensus 75 ~~ly~ltw~-----~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 75 DRLIQLTWR-----NHEGFVYDLATLTPRA 99 (243)
T ss_dssp TEEEEEESS-----SSEEEEEETTTTEEEE
T ss_pred CEEEEEEee-----CCEEEEEECCcCcEEE
Confidence 457776533 2678999999988654
No 12
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=21.22 E-value=2.9e+02 Score=25.96 Aligned_cols=69 Identities=16% Similarity=0.057 Sum_probs=44.2
Q ss_pred eeEEecccCCCCCCCeEEEEeccCCCeeEEecCCccCCccEEeeCCCCCCCCCcEEEEEEEcCCCceEEEEEecCCccce
Q 010461 410 YAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMISEKNGGAYVVLLDGSTFEEI 489 (510)
Q Consensus 410 y~y~~~~~~~~~~~~~lvk~D~~tg~~~~w~~~~~~~~EPvFVPrp~~~~EDDG~Ll~~v~d~~~~S~L~VlDA~~l~~v 489 (510)
..|.+... -+.+..+|.+|++...-.+.+ ..|+.=+-. |.++|+ +.+ +...|.++|+++++.+
T Consensus 77 ~lyv~t~~-----~~~v~viD~~t~~v~~~i~~g--~~~g~glt~------Dg~~l~--vs~--gs~~l~viD~~t~~v~ 139 (266)
T 2iwa_A 77 KLYQVVWL-----KNIGFIYDRRTLSNIKNFTHQ--MKDGWGLAT------DGKILY--GSD--GTSILYEIDPHTFKLI 139 (266)
T ss_dssp EEEEEETT-----CSEEEEEETTTTEEEEEEECC--SSSCCEEEE------CSSSEE--EEC--SSSEEEEECTTTCCEE
T ss_pred EEEEEEec-----CCEEEEEECCCCcEEEEEECC--CCCeEEEEE------CCCEEE--EEC--CCCeEEEEECCCCcEE
Confidence 57776542 267889999998876544322 233332211 334444 233 4578999999999999
Q ss_pred EEEEcC
Q 010461 490 ARARFP 495 (510)
Q Consensus 490 Ar~~lP 495 (510)
+++.+.
T Consensus 140 ~~I~Vg 145 (266)
T 2iwa_A 140 KKHNVK 145 (266)
T ss_dssp EEEECE
T ss_pred EEEEEC
Confidence 998875
No 13
>3euj_B Chromosome partition protein MUKF; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_E*
Probab=20.78 E-value=21 Score=30.44 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=0.0
Q ss_pred cccccCcCcCcccc------c-eeeeeeeeEEEecCCCCCc
Q 010461 19 SCAEHRNHVAWTSV------K-QERWEGELVVEGEIPSWLN 52 (510)
Q Consensus 19 ~~~~~~~~~~~~~~------~-~E~~~~~l~V~G~iP~~L~ 52 (510)
...|+||..-++.- + +|....+-+|.|++|.+|.
T Consensus 17 ~Yfd~pW~Lt~A~aeRL~DlRDEel~Lr~eEvtGelP~elE 57 (152)
T 3euj_B 17 NYFSSPWLLYTAKAEALLDLRDDEAMLNEMEAVGELPMALE 57 (152)
T ss_dssp -----------------------------------------
T ss_pred HhccCchhhhhcchHHHhhhhHHHHhhhhhhhhcCCchhhh
Confidence 46678998877543 2 3344456679999999985
No 14
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=20.14 E-value=3e+02 Score=26.43 Aligned_cols=79 Identities=11% Similarity=0.078 Sum_probs=45.8
Q ss_pred ceeEEecccCCCCCCCeEEEEeccCCCeeEEecCCccCCccEEeeCCCCCCCCCcEEEEEE--EcC----CCceEEEEEe
Q 010461 409 RYAYAIGAKRPCNFPNSLTKLDLVKQKAKNWCEEGIVPSEPLFVARPGATDEDDGVVISMI--SEK----NGGAYVVLLD 482 (510)
Q Consensus 409 ry~y~~~~~~~~~~~~~lvk~D~~tg~~~~w~~~~~~~~EPvFVPrp~~~~EDDG~Ll~~v--~d~----~~~S~L~VlD 482 (510)
+++|.+........-+.|..+|..+++...-.+.+..+ .-.|-| |..+|.+.- .+. +....+.++|
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~sp-------dg~~lyv~~~~~~~~~~g~~~~~v~v~d 87 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG-HVQVSN-------DGKKIYTMTTYHERITRGKRSDVVEVWD 87 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE-EEEECT-------TSSEEEEEEEEETTSSSSCEEEEEEEEE
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC-ceEECC-------CCCEEEEEEecccccccCCCCCEEEEEE
Confidence 57887653211111257899999999875434444333 222222 334544432 221 1235699999
Q ss_pred cCCccceEEEEcC
Q 010461 483 GSTFEEIARARFP 495 (510)
Q Consensus 483 A~~l~~vAr~~lP 495 (510)
+++++.++++.++
T Consensus 88 ~~t~~~~~~i~~~ 100 (361)
T 2oiz_A 88 ADKLTFEKEISLP 100 (361)
T ss_dssp TTTCCEEEEEEEC
T ss_pred CcCCcEEEEEEcC
Confidence 9999999999876
Done!