Query 010466
Match_columns 510
No_of_seqs 290 out of 2052
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 07:25:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010466.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010466hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qdm_A Prophytepsin; aspartic 100.0 5.8E-85 2E-89 688.9 40.7 473 31-510 1-478 (478)
2 3psg_A Pepsinogen; hydrolase(a 100.0 8.3E-68 2.8E-72 542.7 36.6 364 30-510 1-370 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 2.2E-67 7.4E-72 540.7 35.4 369 29-510 7-383 (383)
4 3k1w_A Renin; protease, altern 100.0 5.9E-62 2E-66 495.0 35.2 328 76-510 6-340 (341)
5 1tzs_A Cathepsin E; hydrolase, 100.0 4.3E-62 1.5E-66 497.7 34.2 328 76-510 11-342 (351)
6 3cms_A Chymosin B; hydrolase, 100.0 1E-61 3.5E-66 489.5 36.1 318 76-510 2-323 (323)
7 1dpj_A Proteinase A; proteinas 100.0 1.7E-61 5.6E-66 489.2 36.0 322 78-510 3-329 (329)
8 4aa9_A Chymosin; hydrolase, as 100.0 1E-61 3.5E-66 489.0 32.5 315 79-510 2-320 (320)
9 1am5_A Pepsin, acid proteinase 100.0 2.6E-61 9E-66 486.7 33.2 318 79-510 3-324 (324)
10 1htr_B Gastricsin; aspartyl pr 100.0 3.2E-61 1.1E-65 487.1 33.0 321 79-510 4-329 (329)
11 3qvc_A Histo-aspartic protease 100.0 6.6E-61 2.3E-65 501.2 34.2 319 75-510 124-449 (451)
12 1miq_A Plasmepsin; aspartic pr 100.0 1.9E-60 6.6E-65 488.9 34.4 319 76-510 50-374 (375)
13 2bju_A Plasmepsin II; aspartic 100.0 1.8E-60 6.1E-65 497.3 33.3 318 76-510 126-450 (453)
14 1yg9_A Aspartic protease BLA G 100.0 5.2E-59 1.8E-63 470.9 32.3 315 77-510 6-329 (330)
15 1mpp_A Pepsin; hydrolase(acid 100.0 5.6E-59 1.9E-63 476.7 31.1 323 75-510 5-355 (361)
16 2apr_A Rhizopuspepsin; hydrola 100.0 6.6E-57 2.3E-61 454.6 36.6 308 84-510 11-324 (325)
17 3c9x_A Trichoderma reesei aspa 100.0 8.8E-57 3E-61 454.5 34.2 308 85-509 12-329 (329)
18 1oew_A Endothiapepsin; hydrola 100.0 1.3E-56 4.4E-61 453.3 32.9 306 86-509 13-329 (329)
19 3fv3_A SAPP1P-secreted asparti 100.0 1.6E-55 5.5E-60 447.3 34.5 311 78-510 3-329 (339)
20 1ibq_A Aspergillopepsin; aspar 100.0 1.9E-55 6.6E-60 443.9 34.2 305 86-510 12-325 (325)
21 2qzx_A Candidapepsin-5; aspart 100.0 3E-55 1E-59 445.8 34.8 312 78-510 3-331 (342)
22 1izd_A Aspartic proteinase; su 100.0 2.6E-55 9E-60 442.4 33.7 308 78-510 7-323 (323)
23 1j71_A Candidapepsin, aspartic 100.0 3.2E-55 1.1E-59 444.1 33.6 309 78-510 3-324 (334)
24 3pvk_A Candidapepsin-2; hydrol 100.0 3.4E-55 1.2E-59 445.5 32.4 313 78-510 3-331 (342)
25 1bxo_A Protein (penicillopepsi 100.0 2.3E-55 7.9E-60 442.9 28.5 307 79-510 8-323 (323)
26 1wkr_A Polyporopepsin; hydrola 100.0 6.2E-54 2.1E-58 435.7 33.8 310 78-510 3-333 (340)
27 3lpj_A Beta-secretase 1; alzhe 100.0 5.2E-54 1.8E-58 452.6 28.7 321 81-510 67-420 (455)
28 2ewy_A Beta-secretase 2; BACE2 100.0 1.4E-53 4.7E-58 440.2 30.0 320 81-510 6-355 (383)
29 3vf3_A Beta-secretase 1; struc 100.0 4.4E-53 1.5E-57 439.1 28.1 318 83-510 23-374 (402)
30 2qp8_A Beta-secretase 1; BACE1 100.0 7E-53 2.4E-57 436.6 29.5 320 81-510 14-367 (395)
31 3aup_A SBG7S, BG, basic 7S glo 100.0 1.2E-50 4E-55 420.7 26.9 321 77-510 9-387 (403)
32 3vla_A EDGP; extracellular, in 100.0 5.8E-50 2E-54 415.5 23.7 328 76-509 7-398 (413)
33 1t6e_X Xylanase inhibitor; two 100.0 2.4E-47 8.3E-52 392.9 21.0 320 79-510 4-373 (381)
34 1b5f_A Protein (cardosin A); h 100.0 2.6E-46 8.9E-51 360.5 25.3 233 78-314 3-239 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 4.4E-42 1.5E-46 331.7 26.6 236 170-510 2-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1.3E-23 4.4E-28 171.9 10.6 93 78-170 3-96 (97)
37 1b5f_B Protein (cardosin A); h 99.8 8.1E-21 2.8E-25 152.6 9.9 87 423-510 1-87 (87)
38 3rfi_A Asp; PSI, saposin, hydr 99.6 4.9E-17 1.7E-21 135.2 4.1 106 313-419 3-108 (108)
39 1l9l_A Granulysin; saposin fol 97.1 0.00019 6.6E-09 54.5 2.7 38 382-420 2-39 (74)
40 3bqp_A Proactivator polypeptid 97.1 0.00024 8.1E-09 54.9 3.2 47 381-430 2-48 (80)
41 2qyp_A Proactivator polypeptid 97.1 0.00023 7.7E-09 56.6 2.9 48 380-430 4-51 (91)
42 4ddj_A Saposin-A, protein A; s 97.0 0.00043 1.5E-08 53.9 3.4 41 381-421 3-43 (83)
43 1of9_A Pore-forming peptide am 96.8 0.00056 1.9E-08 52.5 2.9 40 381-421 2-41 (77)
44 2gtg_A Proactivator polypeptid 96.7 0.001 3.5E-08 51.7 3.4 41 380-420 3-43 (83)
45 1nkl_A NK-lysin; saposin fold, 96.5 0.0012 4E-08 50.8 2.4 39 382-420 2-40 (78)
46 1n69_A Saposin B; lipid bindin 96.3 0.0022 7.6E-08 49.6 3.2 41 381-421 3-44 (81)
47 2qyp_A Proactivator polypeptid 96.2 0.0036 1.2E-07 49.5 4.0 40 317-356 46-85 (91)
48 3bqp_A Proactivator polypeptid 95.7 0.0032 1.1E-07 48.3 1.4 37 317-353 43-79 (80)
49 2js9_A Saposin-like protein fa 95.5 0.0019 6.4E-08 51.9 -0.6 51 379-431 19-69 (99)
50 2js9_A Saposin-like protein fa 95.4 0.004 1.4E-07 50.0 1.1 38 316-353 62-99 (99)
51 1nkl_A NK-lysin; saposin fold, 95.4 0.0048 1.6E-07 47.3 1.4 37 317-353 41-77 (78)
52 2gtg_A Proactivator polypeptid 95.3 0.0047 1.6E-07 47.9 1.2 38 317-354 45-82 (83)
53 1of9_A Pore-forming peptide am 94.8 0.006 2.1E-07 46.6 0.6 37 316-352 41-77 (77)
54 1n69_A Saposin B; lipid bindin 94.8 0.0079 2.7E-07 46.4 1.1 36 317-353 45-80 (81)
55 4ddj_A Saposin-A, protein A; s 94.6 0.0069 2.4E-07 46.9 0.3 37 317-353 45-82 (83)
56 1l9l_A Granulysin; saposin fol 93.6 0.022 7.5E-07 43.0 1.4 33 317-349 41-73 (74)
57 2i1a_A DNA damage-inducible pr 88.7 0.99 3.4E-05 38.5 7.0 26 482-507 109-134 (148)
58 3s8i_A Protein DDI1 homolog 1; 87.8 2.1 7.3E-05 36.6 8.5 26 482-507 108-133 (148)
59 3s64_A AC-SLP-1, saposin-like 82.9 0.84 2.9E-05 35.3 3.1 51 302-352 36-87 (87)
60 2hs1_A HIV-1 protease; ultra-h 77.1 2.8 9.6E-05 33.2 4.4 30 90-121 9-38 (99)
61 1fmb_A EIAV protease; hydrolas 76.4 2.3 8E-05 34.0 3.9 26 90-117 9-34 (104)
62 2i1a_A DNA damage-inducible pr 75.2 2.2 7.6E-05 36.3 3.7 91 86-197 23-115 (148)
63 3ec0_A Protease; HIV-2, inhibi 73.0 4.1 0.00014 32.2 4.4 29 91-121 10-38 (99)
64 3liy_A Protease; hydrolase, hy 69.5 3.8 0.00013 33.2 3.5 32 91-122 12-46 (116)
65 2hah_A Protease, retropepsin; 62.6 6.3 0.00022 32.1 3.6 27 90-119 15-41 (116)
66 3s8i_A Protein DDI1 homolog 1; 61.7 5.9 0.0002 33.8 3.5 91 87-197 22-114 (148)
67 3vcm_P Prorenin; aspartic prot 58.9 8.6 0.00029 25.1 3.2 24 29-52 7-30 (43)
68 3sqf_A Protease; folded monome 57.0 10 0.00035 30.7 3.9 30 90-121 10-39 (114)
69 3slz_A GAG-Pro-POL polyprotein 49.8 18 0.00061 30.2 4.4 30 89-120 22-51 (132)
70 3ka2_A [L-Ala51;Gly51']HIV-1 p 42.4 19 0.00067 32.3 3.7 29 90-120 9-37 (203)
71 2rsp_A RSV protease; hydrolase 41.5 24 0.00083 29.0 3.9 24 96-121 27-50 (124)
72 1htr_P Progastricsin (Pro segm 34.6 22 0.00076 22.5 2.2 21 30-50 2-22 (43)
73 1tzs_P Activation peptide from 32.6 21 0.00071 21.4 1.7 21 29-49 2-22 (35)
74 1ibq_A Aspergillopepsin; aspar 27.7 61 0.0021 31.0 5.0 41 252-302 3-43 (325)
75 1bxo_A Protein (penicillopepsi 27.5 63 0.0022 30.8 5.0 41 252-302 4-44 (323)
76 1lya_A Cathepsin D; lysosomal 25.1 23 0.0008 27.5 1.1 32 262-301 12-43 (97)
77 1izd_A Aspartic proteinase; su 25.0 75 0.0026 30.3 5.0 41 252-302 4-44 (323)
78 3ka2_A [L-Ala51;Gly51']HIV-1 p 22.0 90 0.0031 27.9 4.4 30 90-121 113-142 (203)
No 1
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=5.8e-85 Score=688.91 Aligned_cols=473 Identities=73% Similarity=1.277 Sum_probs=392.5
Q ss_pred EEeeeeeccCchhhhhhhcccccccc-hhhhccccccccCCCCCCCCccEEeceeccCceEEEEEeecCCCceEEEEecC
Q 010466 31 YRIGLKKRKFDLNNRVAARLDSKEGE-SFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDT 109 (510)
Q Consensus 31 ~~ipl~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDT 109 (510)
+||||+|+++.++.+.+.+......+ .++ ++. ...+..+...+||.|+.+.+|+++|+||||||++.|+|||
T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DT 73 (478)
T 1qdm_A 1 VRIALKKRPIDRNSRVATGLSGGEEQPLLS----GAN---PLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDT 73 (478)
T ss_dssp CEEEEEECCCCHHHHHHHHTC-----------------------CCSSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEET
T ss_pred CeeeeeeccchHHHHHhcchhhhhHHHHHh----hcc---cccCcCCCceEEeEeccCCEEEEEEEECCCCeEEEEEEcC
Confidence 48999999998888877664322222 111 110 0112234566999999999999999999999999999999
Q ss_pred CCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCceEEEEEEEeEEEEcceEeccc----eeeecCccc
Q 010466 110 GSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQ----ATREPSLTF 185 (510)
Q Consensus 110 GSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs~~G~~~~D~v~~g~~~~~~~----~~~~~~~~~ 185 (510)
||+++||+|..|.....|..++.|+|++|+||+..++.|.+.|++|+++|.+++|+|+||+..+++| +....+..|
T Consensus 74 GSs~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f 153 (478)
T 1qdm_A 74 GSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITF 153 (478)
T ss_dssp TCCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHH
T ss_pred CCcceEEecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCccc
Confidence 9999999999996456899999999999999999999999999999999999999999999999988 223334445
Q ss_pred cccccceEEeeccccccCCCCCcHHHHHHHcCCCCCCeEEEEecCCCCCCCCcEEEEcCcCCCCcccceeEEeccCccce
Q 010466 186 LLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYW 265 (510)
Q Consensus 186 ~~~~~~GIlGLg~~~~s~~~~~~~l~~l~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w 265 (510)
....++||||||++..+.....|++++|++||.|+.++||+||++..+....|+|+|||+|+++|.|++.|+|+.+.++|
T Consensus 154 ~~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w 233 (478)
T 1qdm_A 154 LVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYW 233 (478)
T ss_dssp HHCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTE
T ss_pred ccccccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeE
Confidence 56678999999999988777789999999999999999999998864334589999999999999999999999988999
Q ss_pred EEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHHHhcCCcccccccchhhhhhhHHHHHHhhccCCccch
Q 010466 266 QFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKI 345 (510)
Q Consensus 266 ~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 345 (510)
.|.+++|.|++..+.++..+..++|||||+++++|.+++++|.+++++.+.+..+|+.++++|++.++++|+++++|+++
T Consensus 234 ~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~v 313 (478)
T 1qdm_A 234 QFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKI 313 (478)
T ss_dssp EEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHH
T ss_pred EEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhh
Confidence 99999999999987666678899999999999999999999999999998899999999999999999999999999999
Q ss_pred hccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCce
Q 010466 346 CSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGES 425 (510)
Q Consensus 346 ~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~ 425 (510)
|.+.|+|..++.++.++.++.+++++++.++...++..|++|||++.|++++|++|.|+++|+++++++|+.++...|.|
T Consensus 314 C~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~ 393 (478)
T 1qdm_A 314 CSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGES 393 (478)
T ss_dssp HHHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCC
T ss_pred hccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeE
Confidence 99999999999999999999999988778888899999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEeceeecccCCCCCCeeEEChhhhcceEEEEECCCCeEE
Q 010466 426 AVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVG 505 (510)
Q Consensus 426 ~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iG 505 (510)
.+||+.+..+|+|+|+|+|+.|+|+|++|+++..++....|+++|++++++++.++.||||+.|||++|+|||++++|||
T Consensus 394 ~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIG 473 (478)
T 1qdm_A 394 AVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIG 473 (478)
T ss_dssp EECGGGGTTCCCEEEEETTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEE
T ss_pred EeecccccccccEEEEECCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEE
Confidence 99999888999999999999999999999998665445689999998887666678999999999999999999999999
Q ss_pred EEEcC
Q 010466 506 FAEAA 510 (510)
Q Consensus 506 fa~a~ 510 (510)
||+++
T Consensus 474 fA~a~ 478 (478)
T 1qdm_A 474 FAKAA 478 (478)
T ss_dssp EEEEC
T ss_pred EEeCC
Confidence 99986
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=8.3e-68 Score=542.67 Aligned_cols=364 Identities=42% Similarity=0.778 Sum_probs=312.5
Q ss_pred eEEeeeeeccCchhhhhhhcccccccchhhhccccccccCCCCCC--CCccEEeceeccCceEEEEEeecCCCceEEEEe
Q 010466 30 LYRIGLKKRKFDLNNRVAARLDSKEGESFRTSIRKYSLRGNLGES--GDADIVALKNYMDAQYFGEIGIGTPPQNFTVIF 107 (510)
Q Consensus 30 ~~~ipl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~l 107 (510)
++||||+|.++.++.+.+.+...+ +++.+ ++.+...+... ......||.|+.|.+|+++|+||||||++.|++
T Consensus 1 ~~~ipl~~~~s~r~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~ 75 (370)
T 3psg_A 1 LVKVPLVRKKSLRQNLIKDGKLKD---FLKTH--KHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIF 75 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHH---HHHHC--CCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEE
T ss_pred CEEEEeEEcCcHHHHHHhcCcHHH---HHhhh--hcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEE
Confidence 479999999999988888776544 44422 22222111111 245678999999999999999999999999999
Q ss_pred cCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCceEEEEEEEeEEEEcceEeccc----eeeecCc
Q 010466 108 DTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQ----ATREPSL 183 (510)
Q Consensus 108 DTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs~~G~~~~D~v~~g~~~~~~~----~~~~~~~ 183 (510)
||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++.|.+++|+|++|+..+++| +....+.
T Consensus 76 DTGSs~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~ 154 (370)
T 3psg_A 76 DTGSSNLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGS 154 (370)
T ss_dssp ETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCG
T ss_pred eCCCCccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeeccc
Confidence 999999999999996 66899999999999999999999999999999999999999999999999988 2223344
Q ss_pred cccccccceEEeeccccccCCCCCcHHHHHHHcCCCCCCeEEEEecCCCCCCCCcEEEEcCcCCCCcccceeEEeccCcc
Q 010466 184 TFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKG 263 (510)
Q Consensus 184 ~~~~~~~~GIlGLg~~~~s~~~~~~~l~~l~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~ 263 (510)
.|....++||||||++..+.....|++++|++||.|++++||+||.+.. ..+|+|+|||+|+++|.|++.|+|+.+++
T Consensus 155 ~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~ 232 (370)
T 3psg_A 155 FLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEG 232 (370)
T ss_dssp GGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEET
T ss_pred ccccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeecccccc
Confidence 4666778999999999998878889999999999999999999999862 23899999999999999999999999999
Q ss_pred ceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHHHhcCCcccccccchhhhhhhHHHHHHhhccCCcc
Q 010466 264 YWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQ 343 (510)
Q Consensus 264 ~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~ 343 (510)
+|.|.+++|+|+++.+. +..+..++|||||+++++|.+++++|.+++++..
T Consensus 233 ~w~v~l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~---------------------------- 283 (370)
T 3psg_A 233 YWQITLDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE---------------------------- 283 (370)
T ss_dssp TEEEEECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE----------------------------
T ss_pred eeEEEEeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCcc----------------------------
Confidence 99999999999998875 5578899999999999999999999999997751
Q ss_pred chhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCC
Q 010466 344 KICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMG 423 (510)
Q Consensus 344 ~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~ 423 (510)
...|
T Consensus 284 ----------------------------------------------------------------------------~~~g 287 (370)
T 3psg_A 284 ----------------------------------------------------------------------------NSDG 287 (370)
T ss_dssp ----------------------------------------------------------------------------CTTC
T ss_pred ----------------------------------------------------------------------------cCCC
Confidence 2356
Q ss_pred ceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEeceeecccCCCCCCeeEEChhhhcceEEEEECCCCe
Q 010466 424 ESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMR 503 (510)
Q Consensus 424 ~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~ 503 (510)
.|.+||+....+|+|+|+|+|++++|++++|+++ . .+.|+++|+..+.+...++.||||++|||++|+|||++++|
T Consensus 288 ~~~v~C~~~~~lP~i~f~~~g~~~~l~~~~yi~~-~---~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~r 363 (370)
T 3psg_A 288 EMVISCSSIDSLPDIVFTIDGVQYPLSPSAYILQ-D---DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNK 363 (370)
T ss_dssp CEECCGGGGGGCCCEEEEETTEEEEECHHHHEEE-C---SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTE
T ss_pred cEEEECCCcccCCcEEEEECCEEEEECHHHhccc-C---CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCE
Confidence 7999999888899999999999999999999998 2 24799999987755445568999999999999999999999
Q ss_pred EEEEEcC
Q 010466 504 VGFAEAA 510 (510)
Q Consensus 504 iGfa~a~ 510 (510)
||||+|+
T Consensus 364 iGfA~a~ 370 (370)
T 3psg_A 364 VGLAPVA 370 (370)
T ss_dssp EEEEEBC
T ss_pred EEEEEcC
Confidence 9999996
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=2.2e-67 Score=540.74 Aligned_cols=369 Identities=40% Similarity=0.763 Sum_probs=291.2
Q ss_pred ceEEeeeeeccCchhhhhhhcc-cccccchhhhccccccccCCCCCCCCccEEeceeccCceEEEEEeecCCCceEEEEe
Q 010466 29 GLYRIGLKKRKFDLNNRVAARL-DSKEGESFRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIF 107 (510)
Q Consensus 29 ~~~~ipl~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~l 107 (510)
+++||||+|+++.++.+.+.+. ..+ .++.....+.. .........+||.|+.+.+|+++|+||||||+|.|+|
T Consensus 7 ~~~~i~l~k~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~ 80 (383)
T 2x0b_A 7 TFKRIFLKRMPSIRESLKERGVDMAR---LGPEWSQPMKR---LTLGNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVF 80 (383)
T ss_dssp --------------------------------------------------CEEEEEEETTTEEEEEEEETTTTEEEEEEE
T ss_pred cEEEEEEEECCcHHHHHHHhCchHHH---HHHhhcccccc---ccccCCcceEeeeecCCCEEEEEEEECCCCcEEEEEE
Confidence 4789999999887777666554 221 22211000000 0001234569999999999999999999999999999
Q ss_pred cCCCCceeeeCCCCCC-CcccCCCCCccCCCCCceeECCcEEEEEecCceEEEEEEEeEEEEcceEeccc----eeeecC
Q 010466 108 DTGSSNLWVPSSKCYF-SIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQ----ATREPS 182 (510)
Q Consensus 108 DTGSs~~Wv~~~~C~~-~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs~~G~~~~D~v~~g~~~~~~~----~~~~~~ 182 (510)
||||+++||+|..|.. ...|..|+.|+|++|+||+..++.|.+.|++|+++|.+++|+|++|+..++ | +....+
T Consensus 81 DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g 159 (383)
T 2x0b_A 81 DTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMPA 159 (383)
T ss_dssp ETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECCH
T ss_pred eCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecCC
Confidence 9999999999999962 358999999999999999999999999999999999999999999999999 8 333334
Q ss_pred ccccccccceEEeeccccccCCCCCcHHHHHHHcCCCCCCeEEEEecCCCCCC--CCcEEEEcCcCCCCcccceeEEecc
Q 010466 183 LTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEE--EGGEIVFGGMDPDHYKGEHTYVPVT 260 (510)
Q Consensus 183 ~~~~~~~~~GIlGLg~~~~s~~~~~~~l~~l~~qg~i~~~~FSl~l~~~~~~~--~~G~L~fGg~d~~~~~g~l~~~p~~ 260 (510)
..|....++||||||++..+.....|++++|++||.|++++||+||++..+.. .+|+|+|||+|+++|.|++.|+|+.
T Consensus 160 ~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~ 239 (383)
T 2x0b_A 160 LPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI 239 (383)
T ss_dssp HHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS
T ss_pred cccccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC
Confidence 44556778999999999988878889999999999999999999998864321 3799999999999999999999999
Q ss_pred CccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHHHhcCCcccccccchhhhhhhHHHHHHhhccC
Q 010466 261 QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKD 340 (510)
Q Consensus 261 ~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~ 340 (510)
+.++|.|.+++|.|+++.+. +..+..+++||||+++++|.+++++|.+++++.
T Consensus 240 ~~~~w~v~l~~i~v~~~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~-------------------------- 292 (383)
T 2x0b_A 240 KTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLMEALGAK-------------------------- 292 (383)
T ss_dssp STTSCEEEECEEEESSCCCB-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCE--------------------------
T ss_pred CCceEEEEEeEEEeCCceEE-cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCc--------------------------
Confidence 99999999999999998753 567889999999999999999999999999764
Q ss_pred CccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCC
Q 010466 341 EPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPS 420 (510)
Q Consensus 341 ~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~ 420 (510)
+
T Consensus 293 ------------------------------------------------------------------------------~- 293 (383)
T 2x0b_A 293 ------------------------------------------------------------------------------K- 293 (383)
T ss_dssp ------------------------------------------------------------------------------E-
T ss_pred ------------------------------------------------------------------------------c-
Confidence 0
Q ss_pred CCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEeceeecccCCCCCCeeEEChhhhcceEEEEECC
Q 010466 421 PMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYS 500 (510)
Q Consensus 421 ~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~ 500 (510)
..|.|.++|+.+..+|+|+|+|+|++|+|+|++|+++..+.+...|+++|+..+.+.+.++.||||++|||++|+|||++
T Consensus 294 ~~g~~~v~C~~~~~~P~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~ 373 (383)
T 2x0b_A 294 RLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRR 373 (383)
T ss_dssp CSSCEEEEGGGTTTCCCEEEEETTEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETT
T ss_pred cCCcEEEeccccccCceEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECC
Confidence 24668999998889999999999999999999999986544456899999988765555678999999999999999999
Q ss_pred CCeEEEEEcC
Q 010466 501 NMRVGFAEAA 510 (510)
Q Consensus 501 ~~~iGfa~a~ 510 (510)
++|||||+++
T Consensus 374 ~~rIGfA~a~ 383 (383)
T 2x0b_A 374 NNRIGFALAR 383 (383)
T ss_dssp TTEEEEEEEC
T ss_pred CCEEeEEEcC
Confidence 9999999986
No 4
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=5.9e-62 Score=495.04 Aligned_cols=328 Identities=43% Similarity=0.866 Sum_probs=289.3
Q ss_pred CccEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCC-CcccCCCCCccCCCCCceeECCcEEEEEecC
Q 010466 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYF-SIACYFHSKYRSGRSSTYKKNGKSADIHYGT 154 (510)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~-~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~ 154 (510)
+...+||.|+.|.+|+++|+||||||++.|++||||+++||+|..|.. ...|..++.|+|++|+||+..++.|.+.|++
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 85 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYST 85 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEETT
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEECC
Confidence 567899999999999999999999999999999999999999999963 3479889999999999999999999999999
Q ss_pred ceEEEEEEEeEEEEcceEeccc---eee-ecCccccccccceEEeeccccccCCCCCcHHHHHHHcCCCCCCeEEEEecC
Q 010466 155 GAISGFFSEDHVKIGDLVVKDQ---ATR-EPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNR 230 (510)
Q Consensus 155 gs~~G~~~~D~v~~g~~~~~~~---~~~-~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~l~~l~~qg~i~~~~FSl~l~~ 230 (510)
|++.|.+++|+|+|++..+ ++ ... .....|.....+||||||++..+.....|++++|++||.|++++||+||.+
T Consensus 86 gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~ 164 (341)
T 3k1w_A 86 GTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNR 164 (341)
T ss_dssp EEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECC
T ss_pred cEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeC
Confidence 9999999999999999999 77 222 222235566789999999999887778899999999999999999999998
Q ss_pred CC--CCCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHH
Q 010466 231 NA--DEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVN 308 (510)
Q Consensus 231 ~~--~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~ 308 (510)
.. +....|.|+|||+|++++.|++.|+|+.+.++|.|.+++|.+++..+. ......++|||||+++++|++++++|.
T Consensus 165 ~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~ 243 (341)
T 3k1w_A 165 DSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLM 243 (341)
T ss_dssp CC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHH
T ss_pred CCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEee-cCCCCEEEEECCCChhcCCHHHHHHHH
Confidence 64 223489999999999999999999999999999999999999998753 456789999999999999999999999
Q ss_pred HHhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhH
Q 010466 309 HAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCE 388 (510)
Q Consensus 309 ~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (510)
+++++..
T Consensus 244 ~~~~~~~------------------------------------------------------------------------- 250 (341)
T 3k1w_A 244 EALGAKK------------------------------------------------------------------------- 250 (341)
T ss_dssp HHHTCEE-------------------------------------------------------------------------
T ss_pred HHcCCee-------------------------------------------------------------------------
Confidence 9997651
Q ss_pred HHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEe
Q 010466 389 MAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCIS 468 (510)
Q Consensus 389 ~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~ 468 (510)
...| |.+||+....+|+|+|+|+|++++|++++|+++..+.+...|++
T Consensus 251 -------------------------------~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~~ 298 (341)
T 3k1w_A 251 -------------------------------RLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTL 298 (341)
T ss_dssp -------------------------------CSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEEB
T ss_pred -------------------------------cCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCCCCCeEEe
Confidence 1234 99999987789999999999999999999999865544679999
Q ss_pred ceeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 469 GFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 469 ~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
+|+..+.+...++.||||++|||++|+|||++++|||||+++
T Consensus 299 ~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 299 AIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp SEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 999876554556789999999999999999999999999986
No 5
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.3e-62 Score=497.68 Aligned_cols=328 Identities=48% Similarity=0.886 Sum_probs=284.9
Q ss_pred CccEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCc
Q 010466 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (510)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~g 155 (510)
+...+||.|+.+..|+++|+||||+|++.|++||||+++||+|..|. ...|..++.|+|++|+||+..+|.|.+.|++|
T Consensus 11 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 89 (351)
T 1tzs_A 11 QSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTG 89 (351)
T ss_dssp ---CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCBCCSCEEEEESSSC
T ss_pred CccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-ccccCCCCcCCcccCcceEECCCEEEEEeCCC
Confidence 34458899988999999999999999999999999999999999996 46899999999999999999999999999999
Q ss_pred eEEEEEEEeEEEEcceEeccc----eeeecCccccccccceEEeeccccccCCCCCcHHHHHHHcCCCCCCeEEEEecCC
Q 010466 156 AISGFFSEDHVKIGDLVVKDQ----ATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRN 231 (510)
Q Consensus 156 s~~G~~~~D~v~~g~~~~~~~----~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~l~~l~~qg~i~~~~FSl~l~~~ 231 (510)
++.|.+++|+|++++..++++ +....+..|.....+||||||++..+.....+++++|++||.|++++||+||++.
T Consensus 90 s~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~ 169 (351)
T 1tzs_A 90 SLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSN 169 (351)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCC
T ss_pred CeEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCC
Confidence 999999999999999999888 2222233455567899999999988877788999999999999999999999887
Q ss_pred CCCCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHHHh
Q 010466 232 ADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAI 311 (510)
Q Consensus 232 ~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~l 311 (510)
.+....|.|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|++..+. +..+..++|||||+++++|.+++++|.+++
T Consensus 170 ~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~ 248 (351)
T 1tzs_A 170 PEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPSDKIKQLQNAI 248 (351)
T ss_dssp C--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEE-cCCCceEEeccCCcceeCCHHHHHHHHHHh
Confidence 4333479999999999999999999999988999999999999998864 456789999999999999999999999999
Q ss_pred cCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHH
Q 010466 312 GATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAV 391 (510)
Q Consensus 312 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (510)
++..
T Consensus 249 ~~~~---------------------------------------------------------------------------- 252 (351)
T 1tzs_A 249 GAAP---------------------------------------------------------------------------- 252 (351)
T ss_dssp TCEE----------------------------------------------------------------------------
T ss_pred CCcc----------------------------------------------------------------------------
Confidence 7640
Q ss_pred HHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEecee
Q 010466 392 VWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFS 471 (510)
Q Consensus 392 ~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~~~ 471 (510)
.. +.|.++|+....+|+|+|+|+|++++|++++|+++..+.+...|+++|+
T Consensus 253 ----------------------------~~-g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~~~~ 303 (351)
T 1tzs_A 253 ----------------------------VD-GEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQ 303 (351)
T ss_dssp ----------------------------CS-SSEEECGGGGGGSCCEEEEETTEEEEECTTTSEECC-----CCEEESEE
T ss_pred ----------------------------cC-CeEEEeCCCCccCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEE
Confidence 12 5688999987789999999999999999999999765433468999998
Q ss_pred ecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 472 ALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 472 ~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
..+.+.+..+.||||++|||++|+|||++++|||||+++
T Consensus 304 ~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~ 342 (351)
T 1tzs_A 304 GLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAV 342 (351)
T ss_dssp ECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred ECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECC
Confidence 776543455789999999999999999999999999985
No 6
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1e-61 Score=489.46 Aligned_cols=318 Identities=45% Similarity=0.843 Sum_probs=282.3
Q ss_pred CccEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCc
Q 010466 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (510)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~g 155 (510)
+...+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..+|.|.+.|++|
T Consensus 2 ~~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 80 (323)
T 3cms_A 2 EVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTG 80 (323)
T ss_dssp CCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCC-cccccCCCCCCCccCCCeEECCcEEEEEeCCC
Confidence 35568999999999999999999999999999999999999999995 46899999999999999999999999999999
Q ss_pred eEEEEEEEeEEEEcceEeccc----eeeecCccccccccceEEeeccccccCCCCCcHHHHHHHcCCCCCCeEEEEecCC
Q 010466 156 AISGFFSEDHVKIGDLVVKDQ----ATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRN 231 (510)
Q Consensus 156 s~~G~~~~D~v~~g~~~~~~~----~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~l~~l~~qg~i~~~~FSl~l~~~ 231 (510)
++.|.+++|+|++++..++++ +....+..|.....+||||||++..+.....+++++|++||.|++++||+||.+.
T Consensus 81 s~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~ 160 (323)
T 3cms_A 81 SMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRN 160 (323)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTT
T ss_pred CeEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCC
Confidence 999999999999999999888 2222233454567899999999998887888999999999999999999999876
Q ss_pred CCCCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHHHh
Q 010466 232 ADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAI 311 (510)
Q Consensus 232 ~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~l 311 (510)
.. .|+|+|||+|++++.|++.|+|+.+.++|.|.+++|+|+++.+. ...+..++|||||+++++|++++++|.+++
T Consensus 161 ~~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~ 236 (323)
T 3cms_A 161 GQ---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAI 236 (323)
T ss_dssp SS---CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHHHH
T ss_pred CC---CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEee-cCCCcEEEEecCCccEeCCHHHHHHHHHHh
Confidence 43 49999999999999999999999989999999999999998875 346789999999999999999999999998
Q ss_pred cCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHH
Q 010466 312 GATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAV 391 (510)
Q Consensus 312 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (510)
++..
T Consensus 237 ~~~~---------------------------------------------------------------------------- 240 (323)
T 3cms_A 237 GATQ---------------------------------------------------------------------------- 240 (323)
T ss_dssp TCEE----------------------------------------------------------------------------
T ss_pred CCee----------------------------------------------------------------------------
Confidence 7640
Q ss_pred HHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEecee
Q 010466 392 VWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFS 471 (510)
Q Consensus 392 ~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~~~ 471 (510)
...+.|.++|+....+|+|+|+|+|++++|+|++|+++ ....|+++|+
T Consensus 241 ----------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~----~~~~C~~~i~ 288 (323)
T 3cms_A 241 ----------------------------NQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQ----DQGFCTSGFQ 288 (323)
T ss_dssp ----------------------------ETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEE----ETTEEEESEE
T ss_pred ----------------------------cCCCcEEEECCCCccCceEEEEECCEEEEECHHHhccC----CCCEEEEEEE
Confidence 12356889999888899999999999999999999998 2368999888
Q ss_pred ecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 472 ALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 472 ~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
..+ .++.||||++|||++|+|||++++|||||+++
T Consensus 289 ~~~----~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 289 SEN----HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp EC-------CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eCC----CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 643 34679999999999999999999999999986
No 7
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.7e-61 Score=489.24 Aligned_cols=322 Identities=44% Similarity=0.837 Sum_probs=284.5
Q ss_pred cEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCceE
Q 010466 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAI 157 (510)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs~ 157 (510)
..+||.|+.+..|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..+|.|.+.|++|++
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 81 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSL 81 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCC-CcccCCcCcCCcccCcCeEECCcEEEEEECCceE
Confidence 458999999999999999999999999999999999999999997 4469889999999999999999999999999999
Q ss_pred EEEEEEeEEEEcceEeccc----eeeecCccccccccceEEeeccccccCCCCCcHHHHHHHcCCCCCCeEEEEecCCCC
Q 010466 158 SGFFSEDHVKIGDLVVKDQ----ATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNAD 233 (510)
Q Consensus 158 ~G~~~~D~v~~g~~~~~~~----~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~l~~l~~qg~i~~~~FSl~l~~~~~ 233 (510)
.|.+++|+|+|++..++++ +....+..|.....+||||||++..+.....+++++|++||+|++++||+||.+...
T Consensus 82 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~ 161 (329)
T 1dpj_A 82 EGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSK 161 (329)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGG
T ss_pred EEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCC
Confidence 9999999999999999888 222222245556789999999998877777889999999999999999999986532
Q ss_pred -CCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHHHhc
Q 010466 234 -EEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIG 312 (510)
Q Consensus 234 -~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~l~ 312 (510)
....|+|+|||+|+++|.|++.|+|+.++++|.|.+++|+|++..+. ..+..++|||||+++++|++++++|.++++
T Consensus 162 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 239 (329)
T 1dpj_A 162 DTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINAEIG 239 (329)
T ss_dssp TCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHHHHT
T ss_pred CCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEec--CCCccEEeeCCCCcEECCHHHHHHHHHHhC
Confidence 22479999999999999999999999989999999999999998874 356889999999999999999999999987
Q ss_pred CCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHHH
Q 010466 313 ATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVV 392 (510)
Q Consensus 313 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (510)
+.
T Consensus 240 ~~------------------------------------------------------------------------------ 241 (329)
T 1dpj_A 240 AK------------------------------------------------------------------------------ 241 (329)
T ss_dssp CE------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 54
Q ss_pred HHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEeceee
Q 010466 393 WMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSA 472 (510)
Q Consensus 393 ~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~ 472 (510)
....+.|.++|+....+|+|+|+|+|.+++|+|++|+++.. ..|+++|+.
T Consensus 242 --------------------------~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----~~C~~~~~~ 291 (329)
T 1dpj_A 242 --------------------------KGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS----GSCISAITP 291 (329)
T ss_dssp --------------------------ECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEET----TEEEECEEE
T ss_pred --------------------------cCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEecCC----CEEEEEEEe
Confidence 02346789999987789999999999999999999999753 589999988
Q ss_pred cccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 473 LDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 473 ~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
.+.+.+.++.||||++|||++|++||++++|||||+++
T Consensus 292 ~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 292 MDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp CCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 76544456789999999999999999999999999986
No 8
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1e-61 Score=488.97 Aligned_cols=315 Identities=46% Similarity=0.857 Sum_probs=277.1
Q ss_pred EEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCceEE
Q 010466 79 IVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAIS 158 (510)
Q Consensus 79 ~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs~~ 158 (510)
.+||.|+.|.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 80 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCK-SNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGSME 80 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCC-ccccCCCCCCCCCCCcCeEcCCcEEEEEECCcEEE
Confidence 46899999999999999999999999999999999999999996 56799999999999999999999999999999999
Q ss_pred EEEEEeEEEEcceEeccc----eeeecCccccccccceEEeeccccccCCCCCcHHHHHHHcCCCCCCeEEEEecCCCCC
Q 010466 159 GFFSEDHVKIGDLVVKDQ----ATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADE 234 (510)
Q Consensus 159 G~~~~D~v~~g~~~~~~~----~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~l~~l~~qg~i~~~~FSl~l~~~~~~ 234 (510)
|.+++|+|+|++..++++ +....+..|.....+||||||++..+.....+++++|++||.|++++||+||.+.
T Consensus 81 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~--- 157 (320)
T 4aa9_A 81 GFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN--- 157 (320)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS---
T ss_pred EEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC---
Confidence 999999999999999988 2223333455566799999999998887788999999999999999999999985
Q ss_pred CCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHHHhcCC
Q 010466 235 EEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGAT 314 (510)
Q Consensus 235 ~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~l~~~ 314 (510)
...|+|+|||+|++++.|++.|+|+.+.++|.|.+++|.++++.+. ......++|||||+++++|++++++|.+++++.
T Consensus 158 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 236 (320)
T 4aa9_A 158 GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT 236 (320)
T ss_dssp SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEE-STTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE
T ss_pred CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEec-cCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999999999999999999998875 346789999999999999999999999999764
Q ss_pred cccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHHHHH
Q 010466 315 GIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWM 394 (510)
Q Consensus 315 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (510)
.
T Consensus 237 ~------------------------------------------------------------------------------- 237 (320)
T 4aa9_A 237 E------------------------------------------------------------------------------- 237 (320)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEeceeecc
Q 010466 395 QNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALD 474 (510)
Q Consensus 395 ~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~ 474 (510)
...+.|.+||+....+|+|+|+|+|++++|++++|+.+ ....|+++|+..
T Consensus 238 -------------------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~----~~~~C~~~i~~~- 287 (320)
T 4aa9_A 238 -------------------------NRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTSK----DQGFCTSGFQGD- 287 (320)
T ss_dssp -------------------------CTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEEE----ETTEEEESEEEE-
T ss_pred -------------------------cCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhccC----CCCeEEEEEEcC-
Confidence 12467999999878899999999999999999999976 236899988852
Q ss_pred cCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 475 VAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 475 ~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
..++.||||++|||++|++||++++|||||+||
T Consensus 288 ---~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 288 ---NNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp ---TTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---CCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 234679999999999999999999999999986
No 9
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.6e-61 Score=486.72 Aligned_cols=318 Identities=43% Similarity=0.795 Sum_probs=282.8
Q ss_pred EEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCceEE
Q 010466 79 IVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAIS 158 (510)
Q Consensus 79 ~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs~~ 158 (510)
.+||.|+.+..|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~ 81 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMR 81 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-cccccCCCcCCCccCCCeEeCCcEEEEEECCCCeE
Confidence 47999999999999999999999999999999999999999996 45799899999999999999999999999999999
Q ss_pred EEEEEeEEEEcceEeccc----eeeecCccccccccceEEeeccccccCCCCCcHHHHHHHcCCCCCCeEEEEecCCCCC
Q 010466 159 GFFSEDHVKIGDLVVKDQ----ATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADE 234 (510)
Q Consensus 159 G~~~~D~v~~g~~~~~~~----~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~l~~l~~qg~i~~~~FSl~l~~~~~~ 234 (510)
|.+++|+|++++..++++ +....+..|.....+||||||++..+.....|++++|++||.|++++||+||++..+
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~- 160 (324)
T 1am5_A 82 GILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGA- 160 (324)
T ss_dssp EEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTC-
T ss_pred EEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCCC-
Confidence 999999999999988888 222333345556789999999998887778889999999999999999999988632
Q ss_pred CCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHHHhcCC
Q 010466 235 EEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGAT 314 (510)
Q Consensus 235 ~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~l~~~ 314 (510)
..|+|+|||+|++++.|++.|+|+.+.++|.|.+++|+|+++.+. +.+ ..++|||||+++++|++++++|.+++++.
T Consensus 161 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 161 -NGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp -SCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECC-CCC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred -CCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceee-ccC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 389999999999999999999999888999999999999998764 334 89999999999999999999999988642
Q ss_pred cccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHHHHH
Q 010466 315 GIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWM 394 (510)
Q Consensus 315 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (510)
T Consensus 238 -------------------------------------------------------------------------------- 237 (324)
T 1am5_A 238 -------------------------------------------------------------------------------- 237 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEeceeecc
Q 010466 395 QNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALD 474 (510)
Q Consensus 395 ~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~ 474 (510)
...|.|.++|+....+|+|+|+|+|.+++|+|++|+++. ...|+++|+..+
T Consensus 238 -------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~----~~~C~~~~~~~~ 288 (324)
T 1am5_A 238 -------------------------ENQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGD----QAFCTSGLGSSG 288 (324)
T ss_dssp -------------------------ECCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEES----SSCEEECEEECC
T ss_pred -------------------------ccCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC----CCeEEEEEEECc
Confidence 113568899998889999999999999999999999985 368999998776
Q ss_pred cCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 475 VAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 475 ~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
.+.+.++.||||++|||++|++||++++|||||+++
T Consensus 289 ~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 289 VPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp SCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred cCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 544455789999999999999999999999999986
No 10
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=3.2e-61 Score=487.12 Aligned_cols=321 Identities=44% Similarity=0.856 Sum_probs=283.2
Q ss_pred EEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCceEE
Q 010466 79 IVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAIS 158 (510)
Q Consensus 79 ~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs~~ 158 (510)
.+||+ +.+..|+++|.||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 81 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLT 81 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-CcccCCCCcCCCccCCCeEECCcEEEEEeCCCCeE
Confidence 37888 88999999999999999999999999999999999996 45799899999999999999999999999999999
Q ss_pred EEEEEeEEEEcceEeccc---e-eeecCccccccccceEEeeccccccCCCCCcHHHHHHHcCCCCCCeEEEEecCCCCC
Q 010466 159 GFFSEDHVKIGDLVVKDQ---A-TREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADE 234 (510)
Q Consensus 159 G~~~~D~v~~g~~~~~~~---~-~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~l~~l~~qg~i~~~~FSl~l~~~~~~ 234 (510)
|.+++|+|++++..++++ . ....+..|.....+||||||++..+.....|++++|++||.|++++||+||++....
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~ 161 (329)
T 1htr_B 82 GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGS 161 (329)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSS
T ss_pred EEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCC
Confidence 999999999999999988 2 222233455567899999999998877788999999999999999999999886432
Q ss_pred CCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHHHhcCC
Q 010466 235 EEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGAT 314 (510)
Q Consensus 235 ~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~l~~~ 314 (510)
..|+|+|||+|++++.|++.|+|+.+.++|.|.+++|+|+++.+..+.....++|||||+++++|++++++|.+++++.
T Consensus 162 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 240 (329)
T 1htr_B 162 -SGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 240 (329)
T ss_dssp -EEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE
T ss_pred -CCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCe
Confidence 3799999999999999999999999899999999999999987643456789999999999999999999999999764
Q ss_pred cccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHHHHH
Q 010466 315 GIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWM 394 (510)
Q Consensus 315 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (510)
.
T Consensus 241 ~------------------------------------------------------------------------------- 241 (329)
T 1htr_B 241 E------------------------------------------------------------------------------- 241 (329)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred e-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEeceeecc
Q 010466 395 QNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALD 474 (510)
Q Consensus 395 ~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~ 474 (510)
...+.|.++|+....+|+|+|+|+|++++|+|++|+++.. +.|+++|+..+
T Consensus 242 -------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----g~C~~~~~~~~ 292 (329)
T 1htr_B 242 -------------------------DEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNN----GYCTVGVEPTY 292 (329)
T ss_dssp -------------------------CTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEECS----SCEEESEEEEC
T ss_pred -------------------------cCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhcccCC----CEEEEEEEECC
Confidence 1235688999987789999999999999999999999854 38999998776
Q ss_pred cCCCCCC-eeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 475 VAPPRGP-LWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 475 ~~~~~~~-~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
.+.+.++ .||||++|||++|++||++++|||||+++
T Consensus 293 ~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 293 LSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp CCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 5434455 89999999999999999999999999986
No 11
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=6.6e-61 Score=501.19 Aligned_cols=319 Identities=30% Similarity=0.560 Sum_probs=282.0
Q ss_pred CCccEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecC
Q 010466 75 GDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGT 154 (510)
Q Consensus 75 ~~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~ 154 (510)
.....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++
T Consensus 124 ~~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~-s~~C~~~~~ydps~SsT~~~~~~~f~i~Ygd 202 (451)
T 3qvc_A 124 SEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT-SESCESKNHYDSSKSKTYEKDDTPVKLTSKA 202 (451)
T ss_dssp ---CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEECSS
T ss_pred ccCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-ccccCCCCCCCCCCCcccccCCCEEEEEECC
Confidence 356678999999999999999999999999999999999999999996 5689999999999999999999999999999
Q ss_pred ceEEEEEEEeEEEEcceEeccc---eeee----cCccccccccceEEeeccccccCCCCCcHHHHHHHcCCCCCCeEEEE
Q 010466 155 GAISGFFSEDHVKIGDLVVKDQ---ATRE----PSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFW 227 (510)
Q Consensus 155 gs~~G~~~~D~v~~g~~~~~~~---~~~~----~~~~~~~~~~~GIlGLg~~~~s~~~~~~~l~~l~~qg~i~~~~FSl~ 227 (510)
|++.|.+++|+|++|+..++ + .... ... |.....+||||||++..+....+|++++|++||.|++++||+|
T Consensus 203 Gs~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~ 280 (451)
T 3qvc_A 203 GTISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIY 280 (451)
T ss_dssp EEEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEE
T ss_pred CEEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEE
Confidence 99999999999999999999 8 2222 222 5556789999999999887778899999999999999999999
Q ss_pred ecCCCCCCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHH
Q 010466 228 FNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQV 307 (510)
Q Consensus 228 l~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l 307 (510)
|++.. ...|+|+|||+|++++.|++.|+|+.++++|.|.++ |.|++. +.....++|||||+++++|++++++|
T Consensus 281 L~~~~--~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~----~~~~~~aiiDSGTt~i~lP~~~~~~i 353 (451)
T 3qvc_A 281 LPPEN--KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV----SSKKANVILDSATSVITVPTEFFNQF 353 (451)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE----EEEEEEEEECTTBSSEEECHHHHHHH
T ss_pred EcCCC--CCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc----cCCCceEEEeCCCccccCCHHHHHHH
Confidence 99873 238999999999999999999999999999999999 999998 23567899999999999999999999
Q ss_pred HHHhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhh
Q 010466 308 NHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTC 387 (510)
Q Consensus 308 ~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (510)
.+++++..
T Consensus 354 ~~~i~a~~------------------------------------------------------------------------ 361 (451)
T 3qvc_A 354 VESASVFK------------------------------------------------------------------------ 361 (451)
T ss_dssp HTTTTCEE------------------------------------------------------------------------
T ss_pred HHHcCCee------------------------------------------------------------------------
Confidence 99887641
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeE
Q 010466 388 EMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCI 467 (510)
Q Consensus 388 ~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~ 467 (510)
....|.|.+||+ ...+|+|+|+|+|.+++|||++|+.+..+.+...|+
T Consensus 362 -------------------------------~~~~g~y~v~C~-~~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~C~ 409 (451)
T 3qvc_A 362 -------------------------------VPFLSLYVTTCG-NTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCM 409 (451)
T ss_dssp -------------------------------CTTSSCEEEETT-CTTCCCEEEEETTEEEEECHHHHEEECTTTSTTEEE
T ss_pred -------------------------------cCCCCeEEeeCC-cCcCCcEEEEECCEEEEEcHHHheeecccCCCCeEE
Confidence 012567999999 788999999999999999999999986654567999
Q ss_pred eceeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 468 SGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 468 ~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
++++..+. ..+.||||++|||++|+|||++++|||||+|+
T Consensus 410 ~~i~~~~~---~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 410 LNIVPIDL---EKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp ECEEECCC---STTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEeCCC---CCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99986542 15689999999999999999999999999986
No 12
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.9e-60 Score=488.87 Aligned_cols=319 Identities=33% Similarity=0.661 Sum_probs=281.4
Q ss_pred CccEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCc
Q 010466 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (510)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~g 155 (510)
....+||.|+.+..|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..+|.|.+.|++|
T Consensus 50 ~~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 128 (375)
T 1miq_A 50 ENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGSG 128 (375)
T ss_dssp TTBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC-cccccCCCcCCCccCCceEECCcEEEEEeCCC
Confidence 44568999988999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eEEEEEEEeEEEEcceEeccc--eeee----cCccccccccceEEeeccccccCCCCCcHHHHHHHcCCCCCCeEEEEec
Q 010466 156 AISGFFSEDHVKIGDLVVKDQ--ATRE----PSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFN 229 (510)
Q Consensus 156 s~~G~~~~D~v~~g~~~~~~~--~~~~----~~~~~~~~~~~GIlGLg~~~~s~~~~~~~l~~l~~qg~i~~~~FSl~l~ 229 (510)
++.|.+++|+|++|+..+++. .... .. .|.....+||||||++..+.....|++++|++||.|++++||+||.
T Consensus 129 s~~G~~~~Dtv~ig~~~v~~~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~ 207 (375)
T 1miq_A 129 TVKGFFSKDLVTLGHLSMPYKFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLP 207 (375)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECC
T ss_pred eEEEEEEEEEEEEcCceECcEEEEEEecccccc-ccccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEEec
Confidence 999999999999999887765 2222 22 4445678999999999988878889999999999999999999999
Q ss_pred CCCCCCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHH
Q 010466 230 RNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNH 309 (510)
Q Consensus 230 ~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~ 309 (510)
+... ..|+|+|||+|+++|.|++.|+|+.+.++|.|.++ |+|+++.+ ....++|||||+++++|.+++++|.+
T Consensus 208 ~~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~----~~~~aiiDSGTs~~~lP~~~~~~l~~ 280 (375)
T 1miq_A 208 VHDV--HAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFLNKFFA 280 (375)
T ss_dssp TTCT--TEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHHHHHHH
T ss_pred CCCC--CCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc----ccceEEecCCCccEEcCHHHHHHHHH
Confidence 8632 48999999999999999999999998999999999 99999876 45789999999999999999999999
Q ss_pred HhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHH
Q 010466 310 AIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEM 389 (510)
Q Consensus 310 ~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (510)
++++..
T Consensus 281 ~~~~~~-------------------------------------------------------------------------- 286 (375)
T 1miq_A 281 NLNVIK-------------------------------------------------------------------------- 286 (375)
T ss_dssp HHTCEE--------------------------------------------------------------------------
T ss_pred HhCCcc--------------------------------------------------------------------------
Confidence 997630
Q ss_pred HHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEec
Q 010466 390 AVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISG 469 (510)
Q Consensus 390 ~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~ 469 (510)
+...|.|.++|+. ..+|+|+|+|+|++++|+|++|+++....+...|+++
T Consensus 287 -----------------------------~~~~g~~~~~C~~-~~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C~~~ 336 (375)
T 1miq_A 287 -----------------------------VPFLPFYVTTCDN-KEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMIT 336 (375)
T ss_dssp -----------------------------CTTSSCEEEETTC-TTCCCEEEECSSCEEEECGGGSEEESSSSSCSEEEES
T ss_pred -----------------------------cCCCCeEEEECCC-CCCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEE
Confidence 1234678999997 7899999999999999999999998654345689999
Q ss_pred eeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 470 FSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 470 ~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
|+..+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 337 ~~~~~~~---~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 337 MLPVDID---SNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EEECCSS---SSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEECCCC---CCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 9865421 2689999999999999999999999999985
No 13
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.8e-60 Score=497.33 Aligned_cols=318 Identities=33% Similarity=0.641 Sum_probs=280.0
Q ss_pred CccEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCc
Q 010466 76 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (510)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~g 155 (510)
....+||.|+.+..|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..+|.|.+.|++|
T Consensus 126 ~~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdG 204 (453)
T 2bju_A 126 SNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSG 204 (453)
T ss_dssp CSEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSS
T ss_pred CCCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC-ccccCCCCcCCCccCCceeECCcEEEEEcCCC
Confidence 34679999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eEEEEEEEeEEEEcceEeccc----eeeec--CccccccccceEEeeccccccCCCCCcHHHHHHHcCCCCCCeEEEEec
Q 010466 156 AISGFFSEDHVKIGDLVVKDQ----ATREP--SLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFN 229 (510)
Q Consensus 156 s~~G~~~~D~v~~g~~~~~~~----~~~~~--~~~~~~~~~~GIlGLg~~~~s~~~~~~~l~~l~~qg~i~~~~FSl~l~ 229 (510)
++.|.+++|+|++|+..++ + +.... +..|.....+||||||++..+....+|++++|++||.|++++||+||+
T Consensus 205 s~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~ 283 (453)
T 2bju_A 205 TVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLP 283 (453)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECC
T ss_pred CeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeC
Confidence 9999999999999999999 7 22222 333445678999999999988877889999999999999999999999
Q ss_pred CCCCCCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHH
Q 010466 230 RNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNH 309 (510)
Q Consensus 230 ~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~ 309 (510)
+.+ ...|+|+|||+|++++.|++.|+|+.+.++|.|.++ |+|++ .+ . .+..++|||||+++++|++++++|.+
T Consensus 284 ~~~--~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg-~~--~-~~~~aIiDSGTsl~~lP~~~~~~l~~ 356 (453)
T 2bju_A 284 VHD--KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGN-IM--L-EKANCIVDSGTSAITVPTDFLNKMLQ 356 (453)
T ss_dssp BTT--TBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETT-EE--E-EEEEEEECTTCCSEEECHHHHHHHTT
T ss_pred CCC--CCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECc-EE--e-ccccEEEcCCCCeEecCHHHHHHHHH
Confidence 862 348999999999999999999999988899999999 99999 43 2 56789999999999999999999988
Q ss_pred HhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHH
Q 010466 310 AIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEM 389 (510)
Q Consensus 310 ~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (510)
++++.
T Consensus 357 ~i~~~--------------------------------------------------------------------------- 361 (453)
T 2bju_A 357 NLDVI--------------------------------------------------------------------------- 361 (453)
T ss_dssp TSSCE---------------------------------------------------------------------------
T ss_pred HhCCc---------------------------------------------------------------------------
Confidence 87653
Q ss_pred HHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCC-ceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEe
Q 010466 390 AVVWMQNQLKQNQTQERILNYVNELCDRLPSPMG-ESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCIS 468 (510)
Q Consensus 390 ~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~-~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~ 468 (510)
+...| .|.++|+. ..+|+|+|+|+|.+++|+|++|+++....+...|++
T Consensus 362 -----------------------------~~~~g~~~~v~C~~-~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~~ 411 (453)
T 2bju_A 362 -----------------------------KVPFLPFYVTLCNN-SKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCML 411 (453)
T ss_dssp -----------------------------ECTTSSCEEEETTC-TTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEE
T ss_pred -----------------------------ccCCCceEEEecCC-CCCCcEEEEECCEEEEECHHHhEeecccCCCceEEE
Confidence 01234 68999997 789999999999999999999999865434568999
Q ss_pred ceeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 469 GFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 469 ~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
+|+..+. ..+.||||++|||++|+|||++++|||||+++
T Consensus 412 ~~~~~~~---~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 412 NIIGLDF---PVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp CEEECCC---SSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEeCCC---CCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 9987542 13589999999999999999999999999985
No 14
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=5.2e-59 Score=470.86 Aligned_cols=315 Identities=31% Similarity=0.533 Sum_probs=277.4
Q ss_pred ccEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCccc--CCCCCccCCCCCceeECCcEEEEEecC
Q 010466 77 ADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIAC--YFHSKYRSGRSSTYKKNGKSADIHYGT 154 (510)
Q Consensus 77 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C--~~~~~y~p~~SsT~~~~~~~~~~~Y~~ 154 (510)
...+||.|+.+..|+++|+|| ||++.|++||||+++||+|..|. ...| ..++.|+|++| ||+..++.|.+.|++
T Consensus 6 ~~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~~~y~~~~S-T~~~~~~~~~i~Yg~ 81 (330)
T 1yg9_A 6 PLYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECV-GGACVCPNLQKYEKLKP-KYISDGNVQVKFFDT 81 (330)
T ss_dssp CSCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCC-SGGGGSTTCCCCCCSSC-EEEEEEEEEEEETTT
T ss_pred eeEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-CccCcccccCccCCCCC-ceEECCCEEEEEECC
Confidence 344789999899999999999 89999999999999999999996 4579 88899999999 999999999999999
Q ss_pred ceEEEEEEEeEEEEcceEeccc---eeeecCccccccccceEEeecccccc-CCCCCcHHHHHHHcCCCCCCeEEEEecC
Q 010466 155 GAISGFFSEDHVKIGDLVVKDQ---ATREPSLTFLLAKFDGILGLGFQEIS-VGKAVPVWYNMVNQGLVNEPVFSFWFNR 230 (510)
Q Consensus 155 gs~~G~~~~D~v~~g~~~~~~~---~~~~~~~~~~~~~~~GIlGLg~~~~s-~~~~~~~l~~l~~qg~i~~~~FSl~l~~ 230 (510)
|++.|.+++|+|++|+..++++ .....+..|.....+||||||++..+ ....+|++++|++||.| +++||+||++
T Consensus 82 Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l~~ 160 (330)
T 1yg9_A 82 GSAVGRGIEDSLTISQLTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHHAR 160 (330)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEEEE
T ss_pred ceEEEEEEEEEEEECCEEEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEEcC
Confidence 9999999999999999999988 22222444555678999999999887 66788899999999999 9999999988
Q ss_pred CCCCCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHHH
Q 010466 231 NADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHA 310 (510)
Q Consensus 231 ~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~ 310 (510)
..+....|+|+|||+|++++.|++.|+|+.+.++|.|.+++|.|+++.+. ..+..++|||||+++++|++++++|.++
T Consensus 161 ~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP~~~~~~l~~~ 238 (330)
T 1yg9_A 161 FQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGPKAYVNPINEA 238 (330)
T ss_dssp CTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE--CTTCEEEECTTCSSEEEEHHHHHHHHHH
T ss_pred CCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc--CCCcEEEEecCCccccCCHHHHHHHHHH
Confidence 64333479999999999999999999999999999999999999998864 4678999999999999999999999999
Q ss_pred hcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHH
Q 010466 311 IGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMA 390 (510)
Q Consensus 311 l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (510)
+++..
T Consensus 239 ~~~~~--------------------------------------------------------------------------- 243 (330)
T 1yg9_A 239 IGCVV--------------------------------------------------------------------------- 243 (330)
T ss_dssp HTCEE---------------------------------------------------------------------------
T ss_pred hCCcc---------------------------------------------------------------------------
Confidence 97641
Q ss_pred HHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCC--ce-eeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeE
Q 010466 391 VVWMQNQLKQNQTQERILNYVNELCDRLPSPMG--ES-AVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCI 467 (510)
Q Consensus 391 ~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~--~~-~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~ 467 (510)
...| .| .+||+....+|+|+|+|+|++++|++++|+++. ...|+
T Consensus 244 -----------------------------~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~~----~~~C~ 290 (330)
T 1yg9_A 244 -----------------------------EKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQN----GNLCY 290 (330)
T ss_dssp -----------------------------EECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEE----TTEEE
T ss_pred -----------------------------cCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhcccC----CCcEE
Confidence 1123 57 899997778999999999999999999999985 36899
Q ss_pred eceeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 468 SGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 468 ~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
++|+.. +.++.||||++|||++|+|||++++|||||+++
T Consensus 291 ~~i~~~----~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 291 SGFQPC----GHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp ESEEEE----TTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEeC----CCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 988854 234579999999999999999999999999985
No 15
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=5.6e-59 Score=476.68 Aligned_cols=323 Identities=28% Similarity=0.515 Sum_probs=279.8
Q ss_pred CCccEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecC
Q 010466 75 GDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGT 154 (510)
Q Consensus 75 ~~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~ 154 (510)
+....+||.|+.+..|+++|+||||+|++.|+|||||+++||+|..|.....|..++.|+|++|+||+..++.|.+.|++
T Consensus 5 g~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 84 (361)
T 1mpp_A 5 GSVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGT 84 (361)
T ss_dssp CCEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSS
T ss_pred CccceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECC
Confidence 35667899999999999999999999999999999999999999999423479989999999999999999999999999
Q ss_pred ceEEEEEEEeEEEEcceEeccc----eeeecC-----ccccccccceEEeeccccccCCC------CCcHHHHHHHcCCC
Q 010466 155 GAISGFFSEDHVKIGDLVVKDQ----ATREPS-----LTFLLAKFDGILGLGFQEISVGK------AVPVWYNMVNQGLV 219 (510)
Q Consensus 155 gs~~G~~~~D~v~~g~~~~~~~----~~~~~~-----~~~~~~~~~GIlGLg~~~~s~~~------~~~~l~~l~~qg~i 219 (510)
|++.|.+++|+|+|++..++++ +....+ ..|.....+||||||++..+... .++++++|++||.|
T Consensus 85 Gs~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i 164 (361)
T 1mpp_A 85 GGANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLI 164 (361)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSS
T ss_pred ceEEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCC
Confidence 9999999999999999999987 222222 23445678999999998876533 78899999999999
Q ss_pred CCCeEEEEecCCCCCCCCcEEEEcCcCCCCcccceeEEeccCcc----ceEEEeceEEEcCeeeeecCCCeeEE-EcCCC
Q 010466 220 NEPVFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKG----YWQFDMGDVMIDGQTTGFCAGGCAAI-ADSGT 294 (510)
Q Consensus 220 ~~~~FSl~l~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~----~w~v~l~~i~v~~~~~~~~~~~~~ai-iDTGt 294 (510)
++++||+||.+. ...|.|+|||+|++++.|++.|+|+.+.. +|.|.+++|+|+++.+. +.....++ |||||
T Consensus 165 ~~~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~~ai~iDSGT 240 (361)
T 1mpp_A 165 SSPVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAV-SFDGAQAFTIDTGT 240 (361)
T ss_dssp SSSEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEETTC
T ss_pred CCcEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeec-cCCCCEEEEECCCC
Confidence 999999999875 23799999999999999999999997655 99999999999998874 23567899 99999
Q ss_pred cCcccCHHHHHHHHHHhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcC
Q 010466 295 SLLAGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHR 374 (510)
Q Consensus 295 t~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~ 374 (510)
++++||++++++|.+++++..
T Consensus 241 t~~~lP~~~~~~l~~~~~~~~----------------------------------------------------------- 261 (361)
T 1mpp_A 241 NFFIAPSSFAEKVVKAALPDA----------------------------------------------------------- 261 (361)
T ss_dssp CSEEEEHHHHHHHHHHHCTTC-----------------------------------------------------------
T ss_pred CceeCCHHHHHHHHHHhCCcc-----------------------------------------------------------
Confidence 999999999999999997641
Q ss_pred CCCCCCCccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCC-CcEEEEE--C-----CEE
Q 010466 375 ASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSL-PIVSFTI--G-----GKI 446 (510)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~-P~i~f~~--~-----g~~ 446 (510)
+...+.|.++|+....+ |+|+|+| + |.+
T Consensus 262 --------------------------------------------~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~g~~ 297 (361)
T 1mpp_A 262 --------------------------------------------TESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTID 297 (361)
T ss_dssp --------------------------------------------EEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEE
T ss_pred --------------------------------------------cCCCCcEEEECCCcccCCCcEEEEEEcCCcCCCCeE
Confidence 01245688999877778 9999999 8 899
Q ss_pred EeeCcccceeeecCCCCceeEeceeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 447 FDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 447 ~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
++|+|++|+++... +...|+++|+.. .++.||||++|||++|+|||++++|||||+++
T Consensus 298 ~~i~~~~y~~~~~~-~~~~C~~~i~~~-----~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 355 (361)
T 1mpp_A 298 VSVPISKMLLPVDK-SGETCMFIVLPD-----GGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLA 355 (361)
T ss_dssp EEEEGGGGEEECSS-SSCEEEESEEEE-----SSSCCEEEHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEECHHHhEEecCC-CCCeeEEEEEeC-----CCCCEEEChHHhccEEEEEECCCCEEEEEEcc
Confidence 99999999998543 346899888853 34579999999999999999999999999985
No 16
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=6.6e-57 Score=454.60 Aligned_cols=308 Identities=33% Similarity=0.638 Sum_probs=264.6
Q ss_pred eccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCce-EEEEEE
Q 010466 84 NYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA-ISGFFS 162 (510)
Q Consensus 84 n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs-~~G~~~ 162 (510)
+..+..|+++|+||||+|++.|++||||+++||+|..|..+ |..++.|+|++|+||+..++.|.+.|++|+ +.|.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c--~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~ 88 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC--GSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILA 88 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC--CTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH--hcCCCCCCcccCCCeeeCCCEEEEEECCCCCEEEEEE
Confidence 45688999999999999999999999999999999999733 677889999999999999999999999998 799999
Q ss_pred EeEEEEcceEeccc---eeeecCccccccccceEEeeccccccC-CCCCcHHHHHHHcCCCCCCeEEEEecCCCCCCCCc
Q 010466 163 EDHVKIGDLVVKDQ---ATREPSLTFLLAKFDGILGLGFQEISV-GKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGG 238 (510)
Q Consensus 163 ~D~v~~g~~~~~~~---~~~~~~~~~~~~~~~GIlGLg~~~~s~-~~~~~~l~~l~~qg~i~~~~FSl~l~~~~~~~~~G 238 (510)
+|+|++++..++++ ........|.....+||||||++..+. ...++++++|++||+|++++||+||.+.. ....|
T Consensus 89 ~D~v~~g~~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~-~~~~G 167 (325)
T 2apr_A 89 KDNVNLGGLLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAK-NGGGG 167 (325)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGG-GTCCE
T ss_pred EEEEEECCEEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCC-CCCCC
Confidence 99999999999888 222222234445589999999998764 45778999999999999999999997542 12389
Q ss_pred EEEEcCcCCCCcccceeEEecc-CccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHHHhcCCccc
Q 010466 239 EIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGIV 317 (510)
Q Consensus 239 ~L~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~l~~~~~~ 317 (510)
.|+|||+|+++|.|++.|+|+. ..++|.|.+++|+|++ .+ ......++|||||++++||+++|+++.+++.+.-
T Consensus 168 ~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~--~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~-- 242 (325)
T 2apr_A 168 EYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-ST--VASSFDGILDTGTTLLILPNNIAASVARAYGASD-- 242 (325)
T ss_dssp EEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EE--EECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEE--
T ss_pred EEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-Ee--cCCCceEEEecCCccEECCHHHHHHHHHHHhccc--
Confidence 9999999999999999999996 5789999999999999 33 4467899999999999999999999999986540
Q ss_pred ccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHHHHHHHH
Q 010466 318 SQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQ 397 (510)
Q Consensus 318 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (510)
T Consensus 243 -------------------------------------------------------------------------------- 242 (325)
T 2apr_A 243 -------------------------------------------------------------------------------- 242 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEeceeecccCC
Q 010466 398 LKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAP 477 (510)
Q Consensus 398 ~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~ 477 (510)
+. .+.|.++|+. ..+|+|+|+|+|.+++||+++|+++.. ...|++.|+..+
T Consensus 243 ---------------------~~-~g~~~~~C~~-~~~p~i~f~f~g~~~~ip~~~~~~~~~---~~~C~~~i~~~~--- 293 (325)
T 2apr_A 243 ---------------------NG-DGTYTISCDT-SAFKPLVFSINGASFQVSPDSLVFEEF---QGQCIAGFGYGN--- 293 (325)
T ss_dssp ---------------------CS-SSCEEECSCG-GGCCCEEEEETTEEEEECGGGGEEEEE---TTEEEESEEEES---
T ss_pred ---------------------CC-CCeEEEECCC-CCCCcEEEEECCEEEEECHHHEEEcCC---CCeEEEEEEcCC---
Confidence 01 1568899984 348999999998899999999998754 468999887542
Q ss_pred CCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 478 PRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 478 ~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
.+.||||++|||++|+|||++++|||||+++
T Consensus 294 --~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 294 --WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp --SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred --CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 4579999999999999999999999999985
No 17
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=8.8e-57 Score=454.45 Aligned_cols=308 Identities=29% Similarity=0.467 Sum_probs=261.7
Q ss_pred ccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeE-CCcEEEEEecCce-EEEEEE
Q 010466 85 YMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKK-NGKSADIHYGTGA-ISGFFS 162 (510)
Q Consensus 85 ~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~-~~~~~~~~Y~~gs-~~G~~~ 162 (510)
+.+..|+++|+||||+|++.|++||||+++||+|..|. ...|..++.|+|++|+||+. .++.|.+.|++|+ +.|.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~ 90 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-KSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDVY 90 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEEEEEE
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-ccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEEEEEE
Confidence 45788999999999999999999999999999999996 33567789999999999999 6899999999998 799999
Q ss_pred EeEEEEcceEeccc---eee-ecCccccccccceEEeeccccccC---CCCCcHHHHHHHcCCCCCCeEEEEecCCCCCC
Q 010466 163 EDHVKIGDLVVKDQ---ATR-EPSLTFLLAKFDGILGLGFQEISV---GKAVPVWYNMVNQGLVNEPVFSFWFNRNADEE 235 (510)
Q Consensus 163 ~D~v~~g~~~~~~~---~~~-~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~l~~l~~qg~i~~~~FSl~l~~~~~~~ 235 (510)
+|+|+|++..++++ ... ..+..+.....+||||||++..+. ...++++++|+++ |++++||+||.+.
T Consensus 91 ~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~---- 164 (329)
T 3c9x_A 91 TDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHG---- 164 (329)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSS----
T ss_pred EEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCC----
Confidence 99999999999888 222 222222225679999999988765 2467899999987 8899999999864
Q ss_pred CCcEEEEcCcCCCCcccceeEEecc-CccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHHHhcCC
Q 010466 236 EGGEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGAT 314 (510)
Q Consensus 236 ~~G~L~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~l~~~ 314 (510)
..|.|+|||+|++++.|++.|+|+. +.++|.|.+++|+|+++.+ +.....++|||||++++||++++++|.+++.+.
T Consensus 165 ~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a 242 (329)
T 3c9x_A 165 QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKL--NRNSIDGIADTGTTLLLLDDNVVDAYYANVQSA 242 (329)
T ss_dssp SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCC--CSCCEEEEECTTCCSEEECHHHHHHHHTTCTTC
T ss_pred CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEec--cCCCceEEEECCCCcEeCCHHHHHHHHHhCCCc
Confidence 2799999999999999999999996 5789999999999999876 346789999999999999999999999887433
Q ss_pred cccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHHHHH
Q 010466 315 GIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWM 394 (510)
Q Consensus 315 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (510)
.
T Consensus 243 ~------------------------------------------------------------------------------- 243 (329)
T 3c9x_A 243 Q------------------------------------------------------------------------------- 243 (329)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred E-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEeceeecc
Q 010466 395 QNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALD 474 (510)
Q Consensus 395 ~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~ 474 (510)
.....+.|.+||+ ..+|+|+|+|+|++++||+++|++...+.+...|++.|+..+
T Consensus 244 -----------------------~~~~~~~~~~~C~--~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~ 298 (329)
T 3c9x_A 244 -----------------------YDNQQEGVVFDCD--EDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGGLQSSS 298 (329)
T ss_dssp -----------------------EETTTTEEEEETT--CCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEESEEECT
T ss_pred -----------------------EcCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEEEEcCC
Confidence 0012466889998 479999999999999999999998754333478999887532
Q ss_pred cCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEc
Q 010466 475 VAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 509 (510)
Q Consensus 475 ~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a 509 (510)
..+.||||++|||++|+|||++++|||||+.
T Consensus 299 ----~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 299 ----GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp ----TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred ----CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 3468999999999999999999999999984
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.3e-56 Score=453.26 Aligned_cols=306 Identities=28% Similarity=0.471 Sum_probs=259.2
Q ss_pred cCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeE-CCcEEEEEecCce-EEEEEEE
Q 010466 86 MDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKK-NGKSADIHYGTGA-ISGFFSE 163 (510)
Q Consensus 86 ~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~-~~~~~~~~Y~~gs-~~G~~~~ 163 (510)
.+..|+++|+||||+|++.|++||||+++||+|..|. ...| .++.|+|++|+||+. .++.|.+.|++|+ +.|.+++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~-~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~~ 90 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEV-XQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVYT 90 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC-cccc-ccCccCCccCccceecCCCeEEEEeCCCCcEEEEEEE
Confidence 4788999999999999999999999999999999997 3345 688999999999999 6899999999998 7999999
Q ss_pred eEEEEcceEeccc---ee-eecCccccccccceEEeeccccccC---CCCCcHHHHHHHcCCCCCCeEEEEecCCCCCCC
Q 010466 164 DHVKIGDLVVKDQ---AT-REPSLTFLLAKFDGILGLGFQEISV---GKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEE 236 (510)
Q Consensus 164 D~v~~g~~~~~~~---~~-~~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~l~~l~~qg~i~~~~FSl~l~~~~~~~~ 236 (510)
|+|++++..++++ .. ...+..+.....+||||||++..+. ...++++++|++| |++++||+||.+. .
T Consensus 91 D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~ 164 (329)
T 1oew_A 91 DTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH----A 164 (329)
T ss_dssp EEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS----S
T ss_pred EEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC----C
Confidence 9999999999988 22 2222222225679999999998765 3467899999987 8899999999864 2
Q ss_pred CcEEEEcCcCCCCcccceeEEecc-CccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHHHhcCCc
Q 010466 237 GGEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATG 315 (510)
Q Consensus 237 ~G~L~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~l~~~~ 315 (510)
.|+|+|||+|+++|.|++.|+|+. +.++|.|.+++|+|+++.+. .....++|||||+++++|++++++|.+++.+..
T Consensus 165 ~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~ 242 (329)
T 1oew_A 165 PGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--STSIDGIADTGTTLLYLPATVVSAYWAQVSGAK 242 (329)
T ss_dssp CEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE--EEEEEEEECTTCCSEEECHHHHHHHHTTSTTCE
T ss_pred CeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc--CCCceEEEeCCCCCEECCHHHHHHHHHhCCCcE
Confidence 799999999999999999999996 67899999999999998763 356789999999999999999999998874320
Q ss_pred ccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHHHHHH
Q 010466 316 IVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQ 395 (510)
Q Consensus 316 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (510)
T Consensus 243 -------------------------------------------------------------------------------- 242 (329)
T 1oew_A 243 -------------------------------------------------------------------------------- 242 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEeceeeccc
Q 010466 396 NQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDV 475 (510)
Q Consensus 396 ~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~ 475 (510)
.....+.|.++|+ ..+|+|+|+|+|++++||+++|+++....+...|++.|+..+
T Consensus 243 ----------------------~~~~~g~~~~~C~--~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~- 297 (329)
T 1oew_A 243 ----------------------SSSSVGGYVFPCS--ATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSA- 297 (329)
T ss_dssp ----------------------EETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEEST-
T ss_pred ----------------------EcCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEEEEeCC-
Confidence 0012467889999 479999999999999999999998754334578999887542
Q ss_pred CCCCCCeeEEChhhhcceEEEEEC-CCCeEEEEEc
Q 010466 476 APPRGPLWILGDVFMGPYHTVFDY-SNMRVGFAEA 509 (510)
Q Consensus 476 ~~~~~~~~ILG~~fl~~~yvvfD~-~~~~iGfa~a 509 (510)
..+.||||++|||++|+|||+ +++|||||++
T Consensus 298 ---~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 298 ---GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp ---TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred ---CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 346899999999999999999 9999999985
No 19
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.6e-55 Score=447.27 Aligned_cols=311 Identities=26% Similarity=0.453 Sum_probs=266.2
Q ss_pred cEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCC--CCCCcccCCCCCccCCCCCceeECCcEEEEEecCc
Q 010466 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSK--CYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG 155 (510)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~--C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~g 155 (510)
..+||.+. +..|+++|+||||||++.|++||||+++||++.. |.....|..++.|+|++|+||+..++.|.+.|++|
T Consensus 3 i~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 81 (339)
T 3fv3_A 3 ISLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDG 81 (339)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTTS
T ss_pred eeeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECCC
Confidence 46788876 6789999999999999999999999999999654 65444799899999999999999999999999999
Q ss_pred -eEEEEEEEeEEEEcceEeccc--eeeecCccccccccceEEeeccccccC----------CCCCcHHHHHHHcCCCCCC
Q 010466 156 -AISGFFSEDHVKIGDLVVKDQ--ATREPSLTFLLAKFDGILGLGFQEISV----------GKAVPVWYNMVNQGLVNEP 222 (510)
Q Consensus 156 -s~~G~~~~D~v~~g~~~~~~~--~~~~~~~~~~~~~~~GIlGLg~~~~s~----------~~~~~~l~~l~~qg~i~~~ 222 (510)
.+.|.+++|+|+|++..++++ ...... ...+||||||++..+. ...++++++|++||.|+++
T Consensus 82 s~~~G~~~~D~v~~g~~~v~~~~fg~~~~~-----~~~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~ 156 (339)
T 3fv3_A 82 STSQGTWGKDTVTINGVSITGQQIADVTQT-----SVDQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTN 156 (339)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEE-----SSSSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSS
T ss_pred ceEEEEEEEEEEEECCEEECceEEEEEEec-----CCCceeEEecCccccccccccccccCccCCcHHHHHHHCCCCCCc
Confidence 589999999999999999988 111111 1359999999988753 3356799999999999999
Q ss_pred eEEEEecCCCCCCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHH
Q 010466 223 VFSFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTT 302 (510)
Q Consensus 223 ~FSl~l~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~ 302 (510)
+||+||++.. ...|+|+|||+|++++.|++.|+|+....+|.|.+++|.+++..+.. ...++|||||++++||++
T Consensus 157 ~fsl~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGtt~~~lP~~ 231 (339)
T 3fv3_A 157 AYSLYLNSPS--AETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF---GDGALLDSGTTLTYFPSD 231 (339)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE---EEEEEECTTBSSEEECHH
T ss_pred eEEEEECCCC--CCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC---CccEEEeCCCCCEecCHH
Confidence 9999998763 23899999999999999999999999888999999999999998753 378999999999999999
Q ss_pred HHHHHHHHhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCc
Q 010466 303 IITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDA 382 (510)
Q Consensus 303 ~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (510)
++++|.+++++.. .
T Consensus 232 ~~~~i~~~~~~~~--~---------------------------------------------------------------- 245 (339)
T 3fv3_A 232 FAAQLADKAGARL--V---------------------------------------------------------------- 245 (339)
T ss_dssp HHHHHHHHHTCEE--E----------------------------------------------------------------
T ss_pred HHHHHHHHcCCEE--c----------------------------------------------------------------
Confidence 9999999998651 0
Q ss_pred cchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEE-CCEEEeeCcccceeeecCC
Q 010466 383 MCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTI-GGKIFDLTPDQYILKVGEG 461 (510)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~-~g~~~~i~~~~y~~~~~~~ 461 (510)
..+...+.|.+||+. ..+|+|+|+| +|++++|++++|+++..
T Consensus 246 ----------------------------------~~~~~~~~~~~~C~~-~~~p~i~f~f~~g~~~~v~~~~~~~~~~-- 288 (339)
T 3fv3_A 246 ----------------------------------QVARDQYLYFIDCNT-DTSGTTVFNFGNGAKITVPNTEYVYQNG-- 288 (339)
T ss_dssp ----------------------------------EEETTEEEEEECTTC-CCCSEEEEEETTSCEEEEEGGGGEEECS--
T ss_pred ----------------------------------cccccCceEEEecCC-CCCCcEEEEECCCCEEEECHHHheeeCC--
Confidence 000124568999986 5689999999 58999999999998753
Q ss_pred CCceeEeceeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 462 DAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 462 ~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
...|+++|+. .+.||||++|||++|++||++++|||||+++
T Consensus 289 -~~~C~~~i~~-------~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 329 (339)
T 3fv3_A 289 -DGTCLWGIQP-------SDDTILGDNFLRHAYLLYNLDANTISIAQVK 329 (339)
T ss_dssp -SSCEEESEEE-------CSSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred -CCeEEEEEEe-------CCcEEeChHHHhCEEEEEECCCCEEEEEecC
Confidence 3589998874 2469999999999999999999999999985
No 20
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.9e-55 Score=443.89 Aligned_cols=305 Identities=28% Similarity=0.446 Sum_probs=259.7
Q ss_pred cCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCce-EEEEEEEe
Q 010466 86 MDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA-ISGFFSED 164 (510)
Q Consensus 86 ~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs-~~G~~~~D 164 (510)
.+..|+++|+|| +|++.|++||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.|.+++|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 87 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-SSEQTGHDLYTPSSSA-TKLSGYSWDISYGDGSSASGDVYRD 87 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-HHHHTTSCCCBCCSSC-EECTTCBEEEECSSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-ccccCCCCCCCchhcC-CccCCCEEEEEeCCCCEEEEEEEEe
Confidence 478899999999 89999999999999999999997 3457788999999999 7778999999999998 79999999
Q ss_pred EEEEcceEeccc----eeeecCccccccccceEEeeccccccC---CCCCcHHHHHHHcCCCCCCeEEEEecCCCCCCCC
Q 010466 165 HVKIGDLVVKDQ----ATREPSLTFLLAKFDGILGLGFQEISV---GKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEG 237 (510)
Q Consensus 165 ~v~~g~~~~~~~----~~~~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~l~~l~~qg~i~~~~FSl~l~~~~~~~~~ 237 (510)
+|+|++..++++ +....+..+.....+||||||++..+. ...++++++|.+| |.+++||+||.+. ..
T Consensus 88 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~ 161 (325)
T 1ibq_A 88 TVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSPLFAVQLKHD----AP 161 (325)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEEEETT----EE
T ss_pred EEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCcEEEEEecCC----CC
Confidence 999999999988 222222222224679999999998765 3577899999987 8899999999874 28
Q ss_pred cEEEEcCcCCCCcccceeEEecc-CccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHHHhcCCcc
Q 010466 238 GEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGI 316 (510)
Q Consensus 238 G~L~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~l~~~~~ 316 (510)
|+|+|||+|++++.|++.|+|+. +.++|.|.+++|+|+++.+ +.....++|||||+++++|++++++|.+++.+..
T Consensus 162 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~- 238 (325)
T 1ibq_A 162 GVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSS--SSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQ- 238 (325)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCC--BSCCEEEEECTTCCSEEECHHHHHHHHTTSTTCB-
T ss_pred ceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeec--cCCCceEEEeCCCCcEeCCHHHHHHHHHhCCCce-
Confidence 99999999999999999999996 5789999999999999876 3567899999999999999999999999884320
Q ss_pred cccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHHHHHHH
Q 010466 317 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQN 396 (510)
Q Consensus 317 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (510)
T Consensus 239 -------------------------------------------------------------------------------- 238 (325)
T 1ibq_A 239 -------------------------------------------------------------------------------- 238 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEeceeecccC
Q 010466 397 QLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVA 476 (510)
Q Consensus 397 ~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~ 476 (510)
.....+.|.+||+ ..+|+|+|+|+|++++||+++|+++..+.+...|++.|+..+
T Consensus 239 ---------------------~~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~-- 293 (325)
T 1ibq_A 239 ---------------------ESYEAGGYVFSCS--TDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSNS-- 293 (325)
T ss_dssp ---------------------CCSSSSSCEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEECT--
T ss_pred ---------------------EcCcCCeEEEEcC--CCCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEEEcCC--
Confidence 0112466889998 479999999999999999999998754323478999887532
Q ss_pred CCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 477 PPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 477 ~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
..+.||||++|||++|+|||++++|||||+++
T Consensus 294 --~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 294 --GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp --TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred --CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 34679999999999999999999999999986
No 21
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=3e-55 Score=445.79 Aligned_cols=312 Identities=26% Similarity=0.424 Sum_probs=264.5
Q ss_pred cEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCC--CCCC------CcccCCCCCccCCCCCceeECCcEEE
Q 010466 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSS--KCYF------SIACYFHSKYRSGRSSTYKKNGKSAD 149 (510)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~--~C~~------~~~C~~~~~y~p~~SsT~~~~~~~~~ 149 (510)
..+||.| .+..|+++|+||||+|++.|++||||+++||++. .|.. ...|..++.|+|++|+||+..+|.|.
T Consensus 3 v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 2qzx_A 3 VAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRFD 81 (342)
T ss_dssp EEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcEE
Confidence 4578888 4789999999999999999999999999999866 6752 24788889999999999999999999
Q ss_pred EEecCce-EEEEEEEeEEEEcceEeccc--eeeecCccccccccceEEeeccccccCC--CCCcHHHHHHHcCCCCCCeE
Q 010466 150 IHYGTGA-ISGFFSEDHVKIGDLVVKDQ--ATREPSLTFLLAKFDGILGLGFQEISVG--KAVPVWYNMVNQGLVNEPVF 224 (510)
Q Consensus 150 ~~Y~~gs-~~G~~~~D~v~~g~~~~~~~--~~~~~~~~~~~~~~~GIlGLg~~~~s~~--~~~~~l~~l~~qg~i~~~~F 224 (510)
+.|++|+ +.|.+++|+|+|++..++++ ..... ....+||||||++..+.. .+.+++++|++||.|++++|
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~-----~~~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~~F 156 (342)
T 2qzx_A 82 IKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWS-----TSARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKAAY 156 (342)
T ss_dssp EECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEE-----ECSSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSSSEE
T ss_pred EEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEe-----cCCCcCEEEEccccccCCCccCccHHHHHHHCCCcCccEE
Confidence 9999998 68999999999999998887 11111 125799999999877542 35679999999999999999
Q ss_pred EEEecCCCCCCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHH
Q 010466 225 SFWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTII 304 (510)
Q Consensus 225 Sl~l~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~ 304 (510)
|+||.+.. ...|.|+|||+|+++|.|++.|+|+.+..+|.|.+++|.|+++.+.. +..++|||||++++||++++
T Consensus 157 s~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~aiiDSGTt~~~lP~~~~ 231 (342)
T 2qzx_A 157 SLYLNSAE--ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVDA---NTNVLLDSGTTISYFTRSIV 231 (342)
T ss_dssp EEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE---EEEEEECTTCSSEEECHHHH
T ss_pred EEEeCCCC--CCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecCC---CcCEEEeCCCCCEEcCHHHH
Confidence 99998752 33899999999999999999999999888999999999999988753 46799999999999999999
Q ss_pred HHHHHHhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccc
Q 010466 305 TQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMC 384 (510)
Q Consensus 305 ~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (510)
++|.+++++...
T Consensus 232 ~~l~~~~~~~~~-------------------------------------------------------------------- 243 (342)
T 2qzx_A 232 RNILYAIGAQMK-------------------------------------------------------------------- 243 (342)
T ss_dssp HHHHHHHTCEEE--------------------------------------------------------------------
T ss_pred HHHHHHhCCeee--------------------------------------------------------------------
Confidence 999999987510
Q ss_pred hhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEE-CCEEEeeCcccceeeec---C
Q 010466 385 STCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTI-GGKIFDLTPDQYILKVG---E 460 (510)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~-~g~~~~i~~~~y~~~~~---~ 460 (510)
..+...+.|.++|+ .+|.|+|+| +|++++|++++|+++.. .
T Consensus 244 --------------------------------~~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~i~~~~~~~~~~~~~~ 288 (342)
T 2qzx_A 244 --------------------------------FDSAGNKVYVADCK---TSGTIDFQFGNNLKISVPVSEFLFQTYYTSG 288 (342)
T ss_dssp --------------------------------ECTTSCEEEEECTT---CCCEEEEEETTTEEEEEEGGGGEECCBCTTS
T ss_pred --------------------------------eccCCCcEEEEECC---CCCcEEEEECCCcEEEEcHHHhcccccccCC
Confidence 00112236889998 389999999 79999999999998743 1
Q ss_pred CCCceeEeceeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 461 GDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 461 ~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
.....|++.++.. +.||||++|||++|++||++++|||||+++
T Consensus 289 ~~~~~C~~~i~~~-------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 2qzx_A 289 KPFPKCEVRIRES-------EDNILGDNFLRSAYVVYNLDDKKISMAPVK 331 (342)
T ss_dssp CBCSSEEESEEEC-------SSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCCccEEEEecC-------CCcEeChHhhhcEEEEEECCCCEEEEEeeC
Confidence 2236899988742 259999999999999999999999999985
No 22
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.6e-55 Score=442.43 Aligned_cols=308 Identities=30% Similarity=0.437 Sum_probs=260.8
Q ss_pred cEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCce-
Q 010466 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA- 156 (510)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs- 156 (510)
...|+. .+..|+++|+|| ||++.|++||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.+.|++|+
T Consensus 7 ~~~~~~--~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~ 80 (323)
T 1izd_A 7 TTNPTS--NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPGSSA-QKIDGATWSISYGDGSS 80 (323)
T ss_dssp EEEECG--GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTCCCBCCCTTC-EEEEEEEEEEECTTSCE
T ss_pred eeeEcC--CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-cccccCCCCCCccccC-CccCCCeEEEEcCCCCe
Confidence 334553 478899999999 89999999999999999999997 3457788999999999 8778999999999998
Q ss_pred EEEEEEEeEEEEcceEeccc----eeeecCccccccccceEEeeccccccC---CCCCcHHHHHHHcCCCCCCeEEEEec
Q 010466 157 ISGFFSEDHVKIGDLVVKDQ----ATREPSLTFLLAKFDGILGLGFQEISV---GKAVPVWYNMVNQGLVNEPVFSFWFN 229 (510)
Q Consensus 157 ~~G~~~~D~v~~g~~~~~~~----~~~~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~l~~l~~qg~i~~~~FSl~l~ 229 (510)
+.|.+++|+|+|++..++++ +....+..+.....+||||||++..+. ...++++++|++| |.+++||+||.
T Consensus 81 ~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~L~ 158 (323)
T 1izd_A 81 ASGDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEPIFAVALK 158 (323)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEECC
T ss_pred EEEEEEEEEEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCcEEEEEcc
Confidence 79999999999999999988 222222222225679999999998775 3577899999988 88999999998
Q ss_pred CCCCCCCCcEEEEcCcCCCCcccceeEEecc-CccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHH
Q 010466 230 RNADEEEGGEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVN 308 (510)
Q Consensus 230 ~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~ 308 (510)
+. ..|+|+|||+|++++.|++.|+|+. +.++|.|.+++|+|++ .+ +..+..++|||||+++++|++++++|.
T Consensus 159 ~~----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~--~~~~~~aiiDSGTs~~~lp~~~~~~i~ 231 (323)
T 1izd_A 159 HN----APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS--SSDSITGIADTGTTLLLLDDSIVDAYY 231 (323)
T ss_dssp TT----SCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE--ECCCEEEEECTTCCSEEECHHHHHHHH
T ss_pred CC----CCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cc--cCCCceEEEeCCCcceeCCHHHHHHHH
Confidence 74 2799999999999999999999996 6789999999999999 54 456789999999999999999999999
Q ss_pred HHhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhH
Q 010466 309 HAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCE 388 (510)
Q Consensus 309 ~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (510)
+++.+..
T Consensus 232 ~~i~ga~------------------------------------------------------------------------- 238 (323)
T 1izd_A 232 EQVNGAS------------------------------------------------------------------------- 238 (323)
T ss_dssp TTSTTCE-------------------------------------------------------------------------
T ss_pred HhCCCcE-------------------------------------------------------------------------
Confidence 8884320
Q ss_pred HHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEe
Q 010466 389 MAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCIS 468 (510)
Q Consensus 389 ~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~ 468 (510)
.....+.|.+||+ ..+|+|+|+|+|++++||+++|+++.. +...|++
T Consensus 239 -----------------------------~~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~--~~~~C~~ 285 (323)
T 1izd_A 239 -----------------------------YDSSQGGYVFPSS--ASLPDFSVTIGDYTATVPGEYISFADV--GNGQTFG 285 (323)
T ss_dssp -----------------------------EETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEEC--STTEEEE
T ss_pred -----------------------------EcCcCCEEEEECC--CCCceEEEEECCEEEecCHHHeEEecC--CCCeEEE
Confidence 0012467899999 479999999999999999999998753 2468999
Q ss_pred ceeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 469 GFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 469 ~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
.|+..+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 286 ~i~~~~----~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 286 GIQSNS----GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp SEEECT----TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEcCC----CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 888542 34689999999999999999999999999986
No 23
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=3.2e-55 Score=444.07 Aligned_cols=309 Identities=26% Similarity=0.415 Sum_probs=263.9
Q ss_pred cEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCC--CCCC------CcccCCCCCccCCCCCceeECCcEEE
Q 010466 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSS--KCYF------SIACYFHSKYRSGRSSTYKKNGKSAD 149 (510)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~--~C~~------~~~C~~~~~y~p~~SsT~~~~~~~~~ 149 (510)
..+||.|. +..|+++|+||||+|++.|++||||+++||++. .|.. ...|..++.|+|++|+||+..+|.|.
T Consensus 3 ~~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (334)
T 1j71_A 3 VPTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFS 81 (334)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceE
Confidence 45788886 789999999999999999999999999999976 6752 23788899999999999999999999
Q ss_pred EEecCce-EEEEEEEeEEEEcceEeccceeeecCccccccccceEEeeccccccC--CCCCcHHHHHHHcCCCCCCeEEE
Q 010466 150 IHYGTGA-ISGFFSEDHVKIGDLVVKDQATREPSLTFLLAKFDGILGLGFQEISV--GKAVPVWYNMVNQGLVNEPVFSF 226 (510)
Q Consensus 150 ~~Y~~gs-~~G~~~~D~v~~g~~~~~~~~~~~~~~~~~~~~~~GIlGLg~~~~s~--~~~~~~l~~l~~qg~i~~~~FSl 226 (510)
+.|++|+ +.|.+++|+|++++..++++....... ....+||||||++..+. ..+++++++|++||.|++++||+
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~---~~~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~ 158 (334)
T 1j71_A 82 IEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTT---TSVDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKNAYSL 158 (334)
T ss_dssp EEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEE---ESSSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSSEEEE
T ss_pred EEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEe---cCCCccEEEEcCCcccCccccCCcHHHHHHHCCCCCccEEEE
Confidence 9999998 689999999999999988881111100 12579999999987754 34567999999999999999999
Q ss_pred EecCCCCCCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHH
Q 010466 227 WFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQ 306 (510)
Q Consensus 227 ~l~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~ 306 (510)
||++.. ...|.|+|||+|+++|.|++.|+|+.+..+|.|.+++|.++++.+.. +..++|||||++++||++++++
T Consensus 159 ~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGTt~~~lP~~~~~~ 233 (334)
T 1j71_A 159 YLNSED--ASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVST---NADVVLDSGTTITYFSQSTADK 233 (334)
T ss_dssp ECCCTT--CSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEEE---EEEEEECTTCSSEEECHHHHHH
T ss_pred EeCCCC--CCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEeccC---CccEEEeCCCCcEecCHHHHHH
Confidence 998752 23899999999999999999999999888999999999999988753 4679999999999999999999
Q ss_pred HHHHhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchh
Q 010466 307 VNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCST 386 (510)
Q Consensus 307 l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (510)
|.+++++..
T Consensus 234 l~~~~~~~~----------------------------------------------------------------------- 242 (334)
T 1j71_A 234 FARIVGATW----------------------------------------------------------------------- 242 (334)
T ss_dssp HHHHHTCEE-----------------------------------------------------------------------
T ss_pred HHHHcCCcc-----------------------------------------------------------------------
Confidence 999997650
Q ss_pred hHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCcee-eeCCCCCCCCcEEEEE-CCEEEeeCcccceeeecCCCCc
Q 010466 387 CEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESA-VDCSRLSSLPIVSFTI-GGKIFDLTPDQYILKVGEGDAA 464 (510)
Q Consensus 387 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~-~~c~~~~~~P~i~f~~-~g~~~~i~~~~y~~~~~~~~~~ 464 (510)
....+.|. ++|+ .+|+|+|+| +|++++|++++|+++..++ .
T Consensus 243 --------------------------------~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~i~~~~y~~~~~~~--~ 285 (334)
T 1j71_A 243 --------------------------------DSRNEIYRLPSCD---LSGDAVFNFDQGVKITVPLSELILKDSDS--S 285 (334)
T ss_dssp --------------------------------ETTTTEEECSSSC---CCSEEEEEESTTCEEEEEGGGGEEECSSS--S
T ss_pred --------------------------------cCCCceEEEEcCC---CCCceEEEEcCCcEEEECHHHheeecCCC--C
Confidence 01234677 8998 389999999 7999999999999985432 3
Q ss_pred eeEeceeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 465 QCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 465 ~C~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
.|++.++.. +.||||++|||++|++||++++|||||+++
T Consensus 286 ~C~~~i~~~-------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (334)
T 1j71_A 286 ICYFGISRN-------DANILGDNFLRRAYIVYDLDDKTISLAQVK 324 (334)
T ss_dssp CEEESEEEC-------TTCEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eeEEEEeEC-------CCcEEChHhhccEEEEEECCCCEEEEEecC
Confidence 599988742 259999999999999999999999999985
No 24
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=3.4e-55 Score=445.49 Aligned_cols=313 Identities=26% Similarity=0.435 Sum_probs=262.8
Q ss_pred cEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCC--CC------CCcccCCCCCccCCCCCceeECCcEEE
Q 010466 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSK--CY------FSIACYFHSKYRSGRSSTYKKNGKSAD 149 (510)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~--C~------~~~~C~~~~~y~p~~SsT~~~~~~~~~ 149 (510)
..+||.+. +.+|+++|+||||||++.|++||||+++||++.. |. ....|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 3pvk_A 3 VPVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFK 81 (342)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred cceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEE
Confidence 45778775 6789999999999999999999999999998664 63 235798899999999999999999999
Q ss_pred EEecCce-EEEEEEEeEEEEcceEeccc--eeeecCccccccccceEEeeccccccCC-CCCcHHHHHHHcCCCCCCeEE
Q 010466 150 IHYGTGA-ISGFFSEDHVKIGDLVVKDQ--ATREPSLTFLLAKFDGILGLGFQEISVG-KAVPVWYNMVNQGLVNEPVFS 225 (510)
Q Consensus 150 ~~Y~~gs-~~G~~~~D~v~~g~~~~~~~--~~~~~~~~~~~~~~~GIlGLg~~~~s~~-~~~~~l~~l~~qg~i~~~~FS 225 (510)
+.|++|+ +.|.+++|+|+|++..++++ ..... ....+||||||++..+.. ..++++++|++||.|++++||
T Consensus 82 i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~-----~~~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~fs 156 (342)
T 3pvk_A 82 IGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDS-----TSIDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNAYS 156 (342)
T ss_dssp EECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEE-----ESSSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSEEE
T ss_pred EEecCCCeEEEEEEEEEEEECCEEecceEEEEEEc-----cCCCccEEEecCccccccccCCcHHHHHHhcCCCCCceEE
Confidence 9999998 79999999999999999988 11111 125699999999886543 356799999999999999999
Q ss_pred EEecCCCCCCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHH
Q 010466 226 FWFNRNADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIIT 305 (510)
Q Consensus 226 l~l~~~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~ 305 (510)
+||++.. ...|+|+|||+|++++.|++.|+|+....+|.|.+++|.++++.+.. .+..++|||||++++||+++++
T Consensus 157 ~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~--~~~~~iiDSGtt~~~lP~~~~~ 232 (342)
T 3pvk_A 157 LYLNSPD--AATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINT--DNVDVLLDSGTTITYLQQDLAD 232 (342)
T ss_dssp EECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE--EEEEEEECTTCSSEEECHHHHH
T ss_pred EEeCCCC--CCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecC--CCceEEEeCCCCCeecCHHHHH
Confidence 9998753 23799999999999999999999999888999999999999998753 3478999999999999999999
Q ss_pred HHHHHhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccch
Q 010466 306 QVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCS 385 (510)
Q Consensus 306 ~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (510)
+|.+++++...
T Consensus 233 ~i~~~~~~~~~--------------------------------------------------------------------- 243 (342)
T 3pvk_A 233 QIIKAFNGKLT--------------------------------------------------------------------- 243 (342)
T ss_dssp HHHHHTTCEEE---------------------------------------------------------------------
T ss_pred HHHHHcCCeec---------------------------------------------------------------------
Confidence 99999987510
Q ss_pred hhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEEC-CEEEeeCcccceeeecCCC--
Q 010466 386 TCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIG-GKIFDLTPDQYILKVGEGD-- 462 (510)
Q Consensus 386 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~-g~~~~i~~~~y~~~~~~~~-- 462 (510)
......+.|.+||+. .|+|+|+|+ |.+++||+++|+++.....
T Consensus 244 -------------------------------~~~~~~~~~~~~C~~---~p~i~f~f~~g~~~~vp~~~~~~~~~~~~g~ 289 (342)
T 3pvk_A 244 -------------------------------QDSNGNSFYEVDCNL---SGDVVFNFSKNAKISVPASEFAASLQGDDGQ 289 (342)
T ss_dssp -------------------------------ECTTSCEEEEECSCC---CSEEEEEESTTCEEEEEGGGGEEC-------
T ss_pred -------------------------------ccCCCceEEEEecCC---CCceEEEECCCCEEEEcHHHheeeccccCCC
Confidence 000112358999994 599999997 8999999999998743211
Q ss_pred -CceeEeceeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 463 -AAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 463 -~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
...|++.+.. .+.||||++|||++|++||++++|||||+++
T Consensus 290 ~~~~C~~~i~~-------~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 3pvk_A 290 PYDKCQLLFDV-------NDANILGDNFLRSAYIVYDLDDNEISLAQVK 331 (342)
T ss_dssp ---CEEESEEE-------CTTCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cCCeeEEEEee-------CCCeEeCHHHHhcEEEEEECCCCEEEEEecC
Confidence 2689998874 1468999999999999999999999999985
No 25
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.3e-55 Score=442.95 Aligned_cols=307 Identities=27% Similarity=0.450 Sum_probs=258.9
Q ss_pred EEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCce-E
Q 010466 79 IVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA-I 157 (510)
Q Consensus 79 ~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs-~ 157 (510)
..|+. .+..|+++|+|| ||++.|++||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +
T Consensus 8 ~~~~~--~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~ 81 (323)
T 1bxo_A 8 NTPTA--NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATG-KELSGYTWSISYGDGSSA 81 (323)
T ss_dssp EEECG--GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHC-EEEEEEEEEEECTTSCEE
T ss_pred eeecC--CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-chhccCCCCCCcccCC-cccCCCeEEEEeCCCCeE
Confidence 34443 478899999999 89999999999999999999996 3457788999999999 8878999999999998 7
Q ss_pred EEEEEEeEEEEcceEeccc---eee-ecCccccccccceEEeeccccccC---CCCCcHHHHHHHcCCCCCCeEEEEecC
Q 010466 158 SGFFSEDHVKIGDLVVKDQ---ATR-EPSLTFLLAKFDGILGLGFQEISV---GKAVPVWYNMVNQGLVNEPVFSFWFNR 230 (510)
Q Consensus 158 ~G~~~~D~v~~g~~~~~~~---~~~-~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~l~~l~~qg~i~~~~FSl~l~~ 230 (510)
.|.+++|+|+|++..++++ ... ..+..+.....+||||||++..+. ...++++++|++| |++++||+||.+
T Consensus 82 ~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~ 159 (323)
T 1bxo_A 82 SGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALKH 159 (323)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSSEEEEECCS
T ss_pred EEEEEEEEEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCcEEEEEEeC
Confidence 9999999999999999988 222 222222225679999999998765 2467899999987 889999999986
Q ss_pred CCCCCCCcEEEEcCcCCCCcccceeEEecc-CccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHH
Q 010466 231 NADEEEGGEIVFGGMDPDHYKGEHTYVPVT-QKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNH 309 (510)
Q Consensus 231 ~~~~~~~G~L~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~ 309 (510)
. ..|+|+|||+|+++|.|++.|+|+. +.++|.|.+++|+|++ + ...+..++|||||+++++|++++++|.+
T Consensus 160 ~----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~--~~~~~~aiiDSGTs~~~lP~~~~~~l~~ 231 (323)
T 1bxo_A 160 Q----QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--Q--SGDGFSGIADTGTTLLLLDDSVVSQYYS 231 (323)
T ss_dssp S----SCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--E--EEEEEEEEECTTCSSEEECHHHHHHHHT
T ss_pred C----CCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--c--cCCCceEEEeCCCCceeCCHHHHHHHHH
Confidence 4 2799999999999999999999996 6789999999999999 2 3456789999999999999999999999
Q ss_pred HhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHH
Q 010466 310 AIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEM 389 (510)
Q Consensus 310 ~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (510)
++.+..
T Consensus 232 ~i~~a~-------------------------------------------------------------------------- 237 (323)
T 1bxo_A 232 QVSGAQ-------------------------------------------------------------------------- 237 (323)
T ss_dssp TSTTCE--------------------------------------------------------------------------
T ss_pred hCCCce--------------------------------------------------------------------------
Confidence 884320
Q ss_pred HHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEec
Q 010466 390 AVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISG 469 (510)
Q Consensus 390 ~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~ 469 (510)
.....+.|.+||+ ..+|+|+|+|+|++++||+++|+++... +...|++.
T Consensus 238 ----------------------------~~~~~g~~~~~C~--~~~P~i~f~fgg~~~~l~~~~~~~~~~~-~~~~C~~~ 286 (323)
T 1bxo_A 238 ----------------------------QDSNAGGYVFDCS--TNLPDFSVSISGYTATVPGSLINYGPSG-DGSTCLGG 286 (323)
T ss_dssp ----------------------------EETTTTEEEECTT--CCCCCEEEEETTEEEEECHHHHEEEECS-SSSCEEES
T ss_pred ----------------------------EcCcCCEEEEECC--CCCceEEEEECCEEEEECHHHeEEeccC-CCCeEEEE
Confidence 0012467899999 4799999999999999999999987532 34689998
Q ss_pred eeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 470 FSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 470 ~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
|+..+ ..+.||||++|||++|+|||++++|||||+++
T Consensus 287 i~~~~----~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 287 IQSNS----GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp EEECT----TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EECCC----CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 88542 34689999999999999999999999999986
No 26
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=6.2e-54 Score=435.72 Aligned_cols=310 Identities=27% Similarity=0.485 Sum_probs=258.6
Q ss_pred cEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCceE
Q 010466 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAI 157 (510)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs~ 157 (510)
..+||.|+ +..|+++|+||||+|++.|+|||||+++||+|. +.|+|++|+++ .+|.|.+.|++|++
T Consensus 3 ~~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~~--~~~~~~i~Yg~Gs~ 68 (340)
T 1wkr_A 3 GSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSSA--TSDKVSVTYGSGSF 68 (340)
T ss_dssp EEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCEE--EEEEEEEECSSCEE
T ss_pred ccEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCccc--cCceEEEEECCcEE
Confidence 45899997 679999999999999999999999999999752 46999888754 57899999999999
Q ss_pred EEEEEEeEEEEcceEeccc--eeeecCccccccccceEEeeccccccC--------CCCCcHHHHHHHcCCCCCCeEEEE
Q 010466 158 SGFFSEDHVKIGDLVVKDQ--ATREPSLTFLLAKFDGILGLGFQEISV--------GKAVPVWYNMVNQGLVNEPVFSFW 227 (510)
Q Consensus 158 ~G~~~~D~v~~g~~~~~~~--~~~~~~~~~~~~~~~GIlGLg~~~~s~--------~~~~~~l~~l~~qg~i~~~~FSl~ 227 (510)
+|.+++|+|+||+..++++ ........| ...+||||||++..+. ...++++++|++||.|++++||+|
T Consensus 69 ~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~ 146 (340)
T 1wkr_A 69 SGTEYTDTVTLGSLTIPKQSIGVASRDSGF--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVS 146 (340)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEESC--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEEE
T ss_pred EEEEEEEEEEECCEEEcceEEEEEEccCCC--cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEEEE
Confidence 9999999999999999888 111111112 3579999999998765 356789999999999999999999
Q ss_pred ecCCC-CCCCCcEEEEcCcCCCCcccceeEEeccC----ccceEEEeceEEEcC-eeeeecCCCeeEEEcCCCcCcccCH
Q 010466 228 FNRNA-DEEEGGEIVFGGMDPDHYKGEHTYVPVTQ----KGYWQFDMGDVMIDG-QTTGFCAGGCAAIADSGTSLLAGPT 301 (510)
Q Consensus 228 l~~~~-~~~~~G~L~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~-~~~~~~~~~~~aiiDTGtt~i~lP~ 301 (510)
|.+.. +....|+|+|||+|+++|.|++.|+|+.+ .++|.|. .+|.|++ +.+. .+..++|||||++++||+
T Consensus 147 l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~---~~~~aiiDSGTt~~~lP~ 222 (340)
T 1wkr_A 147 FEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL---SSTAGIVDTGTTLTLIAS 222 (340)
T ss_dssp CCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---EEEEEEECTTBCSEEECH
T ss_pred ecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---CCCeEEEeCCcccccCCH
Confidence 98642 12347999999999999999999999976 7899999 9999998 7663 246899999999999999
Q ss_pred HHHHHHHHHhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCC
Q 010466 302 TIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHD 381 (510)
Q Consensus 302 ~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (510)
+++++|.+++++..
T Consensus 223 ~~~~~l~~~~~a~~------------------------------------------------------------------ 236 (340)
T 1wkr_A 223 DAFAKYKKATGAVA------------------------------------------------------------------ 236 (340)
T ss_dssp HHHHHHHHHHTCEE------------------------------------------------------------------
T ss_pred HHHHHHHHhhCCEE------------------------------------------------------------------
Confidence 99999999887641
Q ss_pred ccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecC-
Q 010466 382 AMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGE- 460 (510)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~- 460 (510)
....+.|.+||+....+|+|+|.|+|.+++|+|++|+++...
T Consensus 237 -------------------------------------~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~~yi~~~~~~ 279 (340)
T 1wkr_A 237 -------------------------------------DNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPRNLN 279 (340)
T ss_dssp -------------------------------------CTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCGGGG
T ss_pred -------------------------------------cCCCCeEEeeccccccCCcEEEEECCEEEEEcHHHhccccccc
Confidence 012467899998666899999999999999999999986432
Q ss_pred ----CCCceeEeceeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 461 ----GDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 461 ----~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
+....|++.|..++.....+..||||++|||++|+|||++++|||||+++
T Consensus 280 ~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 333 (340)
T 1wkr_A 280 TAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTS 333 (340)
T ss_dssp GGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECT
T ss_pred cccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecC
Confidence 12368998888765333334579999999999999999999999999975
No 27
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=5.2e-54 Score=452.60 Aligned_cols=321 Identities=28% Similarity=0.454 Sum_probs=257.4
Q ss_pred eceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCceEEEE
Q 010466 81 ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGF 160 (510)
Q Consensus 81 ~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs~~G~ 160 (510)
.|.+..+..|+++|+||||||++.|+|||||+++||+|..| |..++.|+|++|+||+..++.|.+.|++|++.|.
T Consensus 67 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-----c~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 141 (455)
T 3lpj_A 67 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 141 (455)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred cccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc-----cccCCcccCCCCCCcccCCccEEEEeCCeEEEEE
Confidence 45555678999999999999999999999999999999887 5668899999999999999999999999999999
Q ss_pred EEEeEEEEcc-eEecc--c--eeeecCccc-cccccceEEeeccccccCC--CCCcHHHHHHHcCCCCCCeEEEEecCCC
Q 010466 161 FSEDHVKIGD-LVVKD--Q--ATREPSLTF-LLAKFDGILGLGFQEISVG--KAVPVWYNMVNQGLVNEPVFSFWFNRNA 232 (510)
Q Consensus 161 ~~~D~v~~g~-~~~~~--~--~~~~~~~~~-~~~~~~GIlGLg~~~~s~~--~~~~~l~~l~~qg~i~~~~FSl~l~~~~ 232 (510)
+++|+|+|++ ..+.. + ........| .....+||||||++..+.. ..++++++|++|+.|+ ++||+||.+..
T Consensus 142 ~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~L~~~~ 220 (455)
T 3lpj_A 142 LGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAG 220 (455)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCS
T ss_pred EEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ceeEEEecccc
Confidence 9999999984 22221 1 222222222 2356799999999988764 3789999999999997 99999997631
Q ss_pred C--------CCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecC---CCeeEEEcCCCcCcccCH
Q 010466 233 D--------EEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCA---GGCAAIADSGTSLLAGPT 301 (510)
Q Consensus 233 ~--------~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~---~~~~aiiDTGtt~i~lP~ 301 (510)
. ....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+.+.. ....++|||||++++||.
T Consensus 221 ~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~ 300 (455)
T 3lpj_A 221 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 300 (455)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEEH
T ss_pred ccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeCCH
Confidence 0 23489999999999999999999999999999999999999999876432 256899999999999999
Q ss_pred HHHHHHHHHhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCC
Q 010466 302 TIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHD 381 (510)
Q Consensus 302 ~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (510)
+++++|.+++++....
T Consensus 301 ~~~~~i~~~i~~~~~~---------------------------------------------------------------- 316 (455)
T 3lpj_A 301 KVFEAAVKSIKAASST---------------------------------------------------------------- 316 (455)
T ss_dssp HHHHHHHHHHHHHTTT----------------------------------------------------------------
T ss_pred HHHHHHHHHhhhhccc----------------------------------------------------------------
Confidence 9999999999764100
Q ss_pred ccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCC-CCCceeeeCCCCCC-----CCcEEEEECCE------EEee
Q 010466 382 AMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPS-PMGESAVDCSRLSS-----LPIVSFTIGGK------IFDL 449 (510)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~-~~~~~~~~c~~~~~-----~P~i~f~~~g~------~~~i 449 (510)
...+. ....|.++|..... +|+|+|+|+|. +++|
T Consensus 317 ----------------------------------~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l 362 (455)
T 3lpj_A 317 ----------------------------------EKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITI 362 (455)
T ss_dssp ----------------------------------SCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEE
T ss_pred ----------------------------------cccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEEE
Confidence 00000 01224578876544 89999999765 5999
Q ss_pred CcccceeeecCCC--CceeEeceeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 450 TPDQYILKVGEGD--AAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 450 ~~~~y~~~~~~~~--~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
+|++|+.+..+.+ ...|++ |... ...+.||||++|||++|+|||++++|||||+++
T Consensus 363 ~~~~yi~~~~~~~~~~~~C~~-f~~~----~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 420 (455)
T 3lpj_A 363 LPQQYLRPVEDVATSQDDCYK-FAIS----QSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 420 (455)
T ss_dssp CHHHHEEEECCTTCCSCEEEE-ECEE----EESSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred CHHHheEeccCCCCCCceEEE-Eecc----CCCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 9999999865432 258996 3211 123579999999999999999999999999974
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-53 Score=440.19 Aligned_cols=320 Identities=28% Similarity=0.475 Sum_probs=254.7
Q ss_pred eceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCceEEEE
Q 010466 81 ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGF 160 (510)
Q Consensus 81 ~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs~~G~ 160 (510)
+|++..+..|+++|+||||||++.|+|||||+++||+|..|. .| ++.|+|++|+||+..++.|.+.|++|++.|.
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~---~~--~~~f~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 80 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS---YI--DTYFDTERSSTYRSKGFDVTVKYTQGSWTGF 80 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT---TB--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred eccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC---cc--ccCcccccCccceeCCceEEEEECCcEEEEE
Confidence 567777889999999999999999999999999999999885 45 5789999999999999999999999999999
Q ss_pred EEEeEEEEcceE-eccc----eeeecCccc-cccccceEEeeccccccC--CCCCcHHHHHHHcCCCCCCeEEEEecCC-
Q 010466 161 FSEDHVKIGDLV-VKDQ----ATREPSLTF-LLAKFDGILGLGFQEISV--GKAVPVWYNMVNQGLVNEPVFSFWFNRN- 231 (510)
Q Consensus 161 ~~~D~v~~g~~~-~~~~----~~~~~~~~~-~~~~~~GIlGLg~~~~s~--~~~~~~l~~l~~qg~i~~~~FSl~l~~~- 231 (510)
+++|+|+|++.. ...+ ........| .....+||||||++..+. ...++++++|++|+.| .++||+||++.
T Consensus 81 ~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~FS~~l~~~~ 159 (383)
T 2ewy_A 81 VGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNVFSMQMCGAG 159 (383)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSCEEEEECCC-
T ss_pred EEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-CcceEEEeeccc
Confidence 999999998632 2222 111111112 224679999999998865 4578899999999999 79999999752
Q ss_pred ----CCCCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCC---CeeEEEcCCCcCcccCHHHH
Q 010466 232 ----ADEEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAG---GCAAIADSGTSLLAGPTTII 304 (510)
Q Consensus 232 ----~~~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~---~~~aiiDTGtt~i~lP~~~~ 304 (510)
.+....|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|+|+++.+.+... ...++|||||+++++|++++
T Consensus 160 ~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~ 239 (383)
T 2ewy_A 160 LPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVF 239 (383)
T ss_dssp --------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHHH
T ss_pred cccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHHH
Confidence 11234899999999999999999999999889999999999999998764322 46899999999999999999
Q ss_pred HHHHHHhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccc
Q 010466 305 TQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMC 384 (510)
Q Consensus 305 ~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (510)
++|.+++++.....
T Consensus 240 ~~l~~~i~~~~~~~------------------------------------------------------------------ 253 (383)
T 2ewy_A 240 DAVVEAVARASLIP------------------------------------------------------------------ 253 (383)
T ss_dssp HHHHHHHHHTTCSS------------------------------------------------------------------
T ss_pred HHHHHHHhhhcccc------------------------------------------------------------------
Confidence 99999997651000
Q ss_pred hhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCC-CCceeeeCCCC-----CCCCcEEEEECC------EEEeeCcc
Q 010466 385 STCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSP-MGESAVDCSRL-----SSLPIVSFTIGG------KIFDLTPD 452 (510)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~-~~~~~~~c~~~-----~~~P~i~f~~~g------~~~~i~~~ 452 (510)
..+.. ...|.++|... ..+|+|+|+|+| .+++|+|+
T Consensus 254 --------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~ 301 (383)
T 2ewy_A 254 --------------------------------EFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQ 301 (383)
T ss_dssp --------------------------------CCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEECHH
T ss_pred --------------------------------cCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEEChH
Confidence 00000 01246778654 258999999976 37999999
Q ss_pred cceeeecC-CCCceeEe-ceeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 453 QYILKVGE-GDAAQCIS-GFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 453 ~y~~~~~~-~~~~~C~~-~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
+|+.+..+ .....|++ .+.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 302 ~yi~~~~~~~~~~~C~~~~i~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 355 (383)
T 2ewy_A 302 LYIQPMMGAGLNYECYRFGISP------STNALVIGATVMEGFYVIFDRAQKRVGFAASP 355 (383)
T ss_dssp HHEEEECCCTTCSEEEEESEEE------ESSCEEECHHHHTTEEEEEETTTTEEEEEECT
T ss_pred HheeecccCCCCceeEEEEecC------CCCcEEEChHHhCCeeEEEECCCCeEEEEecc
Confidence 99987642 23468985 4442 13469999999999999999999999999974
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=4.4e-53 Score=439.13 Aligned_cols=318 Identities=28% Similarity=0.456 Sum_probs=253.6
Q ss_pred eeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCceEEEEEE
Q 010466 83 KNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFS 162 (510)
Q Consensus 83 ~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs~~G~~~ 162 (510)
....+..|+++|+||||||++.|+|||||+++||+|..| |..++.|+|++|+||+..++.|.+.|++|++.|.++
T Consensus 23 ~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c-----~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~ 97 (402)
T 3vf3_A 23 RGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGELG 97 (402)
T ss_dssp EEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEEEE
T ss_pred cCCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC-----CcccCCcCcccCcccccCCCEEEEEECcEEEEEEEE
Confidence 334467899999999999999999999999999999887 566889999999999999999999999999999999
Q ss_pred EeEEEEcc-eEeccc----eeeecCccc-cccccceEEeeccccccCC--CCCcHHHHHHHcCCCCCCeEEEEecCCC--
Q 010466 163 EDHVKIGD-LVVKDQ----ATREPSLTF-LLAKFDGILGLGFQEISVG--KAVPVWYNMVNQGLVNEPVFSFWFNRNA-- 232 (510)
Q Consensus 163 ~D~v~~g~-~~~~~~----~~~~~~~~~-~~~~~~GIlGLg~~~~s~~--~~~~~l~~l~~qg~i~~~~FSl~l~~~~-- 232 (510)
+|+|+|++ ..+..+ ........| .....+||||||++..+.. ..++++++|++|+.|+ ++||+||.+..
T Consensus 98 ~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~l~~~~~~ 176 (402)
T 3vf3_A 98 TDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAGFP 176 (402)
T ss_dssp EEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCC--
T ss_pred EEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cceEEEeeccccc
Confidence 99999984 333333 112222222 2356799999999988764 3789999999999997 99999997531
Q ss_pred ---C---CCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecC---CCeeEEEcCCCcCcccCHHH
Q 010466 233 ---D---EEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCA---GGCAAIADSGTSLLAGPTTI 303 (510)
Q Consensus 233 ---~---~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~---~~~~aiiDTGtt~i~lP~~~ 303 (510)
. ....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+.+.. ....++|||||++++||.++
T Consensus 177 ~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~ 256 (402)
T 3vf3_A 177 LNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKV 256 (402)
T ss_dssp -----------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHH
T ss_pred ccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHHH
Confidence 0 23489999999999999999999999999999999999999999886432 25689999999999999999
Q ss_pred HHHHHHHhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCcc
Q 010466 304 ITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAM 383 (510)
Q Consensus 304 ~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (510)
+++|.+++++....
T Consensus 257 ~~~i~~~i~~~~~~------------------------------------------------------------------ 270 (402)
T 3vf3_A 257 FEAAVKSIKAASST------------------------------------------------------------------ 270 (402)
T ss_dssp HHHHHHHHHHHTTT------------------------------------------------------------------
T ss_pred HHHHHHHHhhhccc------------------------------------------------------------------
Confidence 99999999764100
Q ss_pred chhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCC-CCCceeeeCCCCC-----CCCcEEEEECCE------EEeeCc
Q 010466 384 CSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPS-PMGESAVDCSRLS-----SLPIVSFTIGGK------IFDLTP 451 (510)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~-~~~~~~~~c~~~~-----~~P~i~f~~~g~------~~~i~~ 451 (510)
...+. ....|.++|.... .+|+|+|+|+|. +++|+|
T Consensus 271 --------------------------------~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~ 318 (402)
T 3vf3_A 271 --------------------------------EKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILP 318 (402)
T ss_dssp --------------------------------SCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEECH
T ss_pred --------------------------------cccCccccccccccccccccchHhhCCceEEEEecCCCCceEEEEECH
Confidence 00000 0122467887554 689999999764 599999
Q ss_pred ccceeeecCCC--CceeEe-ceeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 452 DQYILKVGEGD--AAQCIS-GFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 452 ~~y~~~~~~~~--~~~C~~-~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
++|+.+..+.. ...|++ .+.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 319 ~~yi~~~~~~~~~~~~C~~~~~~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 374 (402)
T 3vf3_A 319 QQYLRPVEDVATSQDDCYKFAISQ------SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 374 (402)
T ss_dssp HHHEEECCCGGGTTEEEEEECEEE------ESSCEEECHHHHTTEEEEEEGGGTEEEEEEET
T ss_pred HHheehhccCCCCCceEEEEeccC------CCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 99999765432 248996 3321 23579999999999999999999999999974
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=7e-53 Score=436.55 Aligned_cols=320 Identities=28% Similarity=0.444 Sum_probs=254.6
Q ss_pred eceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCceEEEE
Q 010466 81 ALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGF 160 (510)
Q Consensus 81 ~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs~~G~ 160 (510)
+|++..+..|+++|+||||+|++.|+|||||+++||+|..|. .| ++.|+|++|+||+..++.|.+.|++|++.|.
T Consensus 14 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~---~~--~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 88 (395)
T 2qp8_A 14 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP---FL--HRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 88 (395)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT---TC--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred ecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc---cc--cCCcCcccCCCceeCCceEEEEECCcEEEEE
Confidence 455566789999999999999999999999999999999884 34 6889999999999999999999999999999
Q ss_pred EEEeEEEEc-ceEeccc----eeeecCcccc-ccccceEEeeccccccCC--CCCcHHHHHHHcCCCCCCeEEEEecCCC
Q 010466 161 FSEDHVKIG-DLVVKDQ----ATREPSLTFL-LAKFDGILGLGFQEISVG--KAVPVWYNMVNQGLVNEPVFSFWFNRNA 232 (510)
Q Consensus 161 ~~~D~v~~g-~~~~~~~----~~~~~~~~~~-~~~~~GIlGLg~~~~s~~--~~~~~l~~l~~qg~i~~~~FSl~l~~~~ 232 (510)
+++|+|+|+ +..+..+ ........|. ....+||||||++..+.. ...+++++|++|+.|+ ++||+||++..
T Consensus 89 ~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~FS~~L~~~~ 167 (395)
T 2qp8_A 89 LGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAG 167 (395)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCS
T ss_pred EEeEEEEECCCCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ceEEEEecccc
Confidence 999999998 4444332 2222222222 346799999999987653 5788999999999997 89999998631
Q ss_pred C--------CCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecC---CCeeEEEcCCCcCcccCH
Q 010466 233 D--------EEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCA---GGCAAIADSGTSLLAGPT 301 (510)
Q Consensus 233 ~--------~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~---~~~~aiiDTGtt~i~lP~ 301 (510)
- ....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+.+.. ....++|||||++++||+
T Consensus 168 ~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~ 247 (395)
T 2qp8_A 168 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 247 (395)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEH
T ss_pred ccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEecCH
Confidence 0 12479999999999999999999999988999999999999999875432 246799999999999999
Q ss_pred HHHHHHHHHhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCC
Q 010466 302 TIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHD 381 (510)
Q Consensus 302 ~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (510)
+++++|.+++++.....
T Consensus 248 ~~~~~l~~~i~~~~~~~--------------------------------------------------------------- 264 (395)
T 2qp8_A 248 KVFEAAVKSIKAASSTE--------------------------------------------------------------- 264 (395)
T ss_dssp HHHHHHHHHHHHHTTTS---------------------------------------------------------------
T ss_pred HHHHHHHHHHhhhcccc---------------------------------------------------------------
Confidence 99999999987541000
Q ss_pred ccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCC-CCCceeeeCCCCC-----CCCcEEEEECCE------EEee
Q 010466 382 AMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPS-PMGESAVDCSRLS-----SLPIVSFTIGGK------IFDL 449 (510)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~-~~~~~~~~c~~~~-----~~P~i~f~~~g~------~~~i 449 (510)
..+. ....+.++|.... .+|+|+|+|+|. +++|
T Consensus 265 -----------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l 309 (395)
T 2qp8_A 265 -----------------------------------KFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITI 309 (395)
T ss_dssp -----------------------------------CCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEE
T ss_pred -----------------------------------cCCccccccccccccccccchHhhCCcEEEEEccCCCCceEEEEE
Confidence 0000 0012346776543 589999999654 7999
Q ss_pred CcccceeeecC--CCCceeE-eceeecccCCCCCCeeEEChhhhcceEEEEECCCCeEEEEEcC
Q 010466 450 TPDQYILKVGE--GDAAQCI-SGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 450 ~~~~y~~~~~~--~~~~~C~-~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
+|++|+.+..+ .+...|+ .++.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 310 ~p~~yi~~~~~~~~~~~~C~~~~i~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 367 (395)
T 2qp8_A 310 LPQQYLRPVEDVATSQDDCYKFAISQ------SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 367 (395)
T ss_dssp CHHHHEEEECCTTCCSCEEEEECEEE------ESSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred CHHHhEeecccCCCCCceEEEEEecC------CCCcEEEChHHhCCeeEEEECCCCEEEEEecc
Confidence 99999998653 2335897 45542 12479999999999999999999999999974
No 31
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.2e-50 Score=420.72 Aligned_cols=321 Identities=16% Similarity=0.256 Sum_probs=246.9
Q ss_pred ccEEece-eccCceEEEEEeecCCCceEEEEecCCCCceeeeCC-----------CCCCCcccCCCCCc------cCCCC
Q 010466 77 ADIVALK-NYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSS-----------KCYFSIACYFHSKY------RSGRS 138 (510)
Q Consensus 77 ~~~~~l~-n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~-----------~C~~~~~C~~~~~y------~p~~S 138 (510)
...+||+ |+.+.+|+++|.||||||++.|+|||||+++||+|. .|. ...|..++.| ++.+|
T Consensus 9 ~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~-s~~C~~~~~~~c~~c~~~~~s 87 (403)
T 3aup_A 9 LVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH-STQCSRANTHQCLSCPAASRP 87 (403)
T ss_dssp CEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTT-BHHHHHTTCCCEEECSSSCBT
T ss_pred cEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCC-CccccCccccCccccCCCCCC
Confidence 3468999 778899999999999999999999999999999999 664 4457777777 66554
Q ss_pred CceeECCcEEEEEec-Cce-EEEEEEEeEEEEcc-----------eEeccc---eeeecCcc-ccccccceEEeeccccc
Q 010466 139 STYKKNGKSADIHYG-TGA-ISGFFSEDHVKIGD-----------LVVKDQ---ATREPSLT-FLLAKFDGILGLGFQEI 201 (510)
Q Consensus 139 sT~~~~~~~~~~~Y~-~gs-~~G~~~~D~v~~g~-----------~~~~~~---~~~~~~~~-~~~~~~~GIlGLg~~~~ 201 (510)
+ +....|.|.+.|+ +|+ +.|.+++|+|+|++ ..++++ ........ +.....+||||||++..
T Consensus 88 ~-~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 166 (403)
T 3aup_A 88 G-CHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPI 166 (403)
T ss_dssp T-BCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTT
T ss_pred C-CCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCc
Confidence 4 4556899999997 554 79999999999987 677776 22221111 33456899999999876
Q ss_pred cCCCCCcHHHHHHHcCCCCCCeEEEEecCCCCCCCCcEEEEcCcCCCCc--c-c-----ceeEEeccCc--cceEEEece
Q 010466 202 SVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPDHY--K-G-----EHTYVPVTQK--GYWQFDMGD 271 (510)
Q Consensus 202 s~~~~~~~l~~l~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~d~~~~--~-g-----~l~~~p~~~~--~~w~v~l~~ 271 (510)
+ +..+|. ++.+.+++||+||.+.. ...|.|+||| |+.+| . | ++.|+|+... ++|.|.+++
T Consensus 167 s------~~~ql~-~~~~~~~~FS~~L~~~~--~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~ 236 (403)
T 3aup_A 167 S------LPNQLA-SHFGLQRQFTTCLSRYP--TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNS 236 (403)
T ss_dssp S------HHHHHH-HHHTCCSEEEEECCSCT--TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEE
T ss_pred C------HHHHHH-hhcCCCCeEEEEcCCCC--CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEE
Confidence 5 555664 45577899999998752 2389999999 98888 5 5 9999999765 899999999
Q ss_pred EEEcCeee-eecCC--------CeeEEEcCCCcCcccCHHHHHHHHHHhcCCcccccccchhhhhhhHHHHHHhhccCCc
Q 010466 272 VMIDGQTT-GFCAG--------GCAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEP 342 (510)
Q Consensus 272 i~v~~~~~-~~~~~--------~~~aiiDTGtt~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ 342 (510)
|+|+++.+ .+... ...+||||||++++||+++|++|.++|.+... .+ .
T Consensus 237 i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~----------~~---------~---- 293 (403)
T 3aup_A 237 IRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLP----------KQ---------A---- 293 (403)
T ss_dssp EEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSC----------GG---------G----
T ss_pred EEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhc----------cc---------c----
Confidence 99999887 43322 23599999999999999999999999854300 00 0
Q ss_pred cchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCC
Q 010466 343 QKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPM 422 (510)
Q Consensus 343 ~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~ 422 (510)
. ..+...
T Consensus 294 ----------------------------------------------------------------------~---~~~~~~ 300 (403)
T 3aup_A 294 ----------------------------------------------------------------------Q---VKSVAP 300 (403)
T ss_dssp ----------------------------------------------------------------------E---ECCCTT
T ss_pred ----------------------------------------------------------------------c---cCCCCC
Confidence 0 000112
Q ss_pred CceeeeCCCCCCCCcEEEEECC---EEEeeCcccceeeecCCCCceeEeceeecccCCCCCCeeEEChhhhcceEEEEEC
Q 010466 423 GESAVDCSRLSSLPIVSFTIGG---KIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDY 499 (510)
Q Consensus 423 ~~~~~~c~~~~~~P~i~f~~~g---~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~ 499 (510)
..|.++|+.+..+|+|+|+|+| ++|+|++++|+++..+ ...|+ +|+..+. ...+.||||+.|||++|+|||+
T Consensus 301 ~~~c~~c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~-~~~~~~~--~~~~~~ILG~~fl~~~yvvfD~ 375 (403)
T 3aup_A 301 FGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCL-GVMNGGM--QPRAEITLGARQLEENLVVFDL 375 (403)
T ss_dssp CSCEECGGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEE-CEEECCS--CCSSSEEECHHHHTTSCEEEET
T ss_pred CCceEECCCcCcCCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEE-EEEcCCC--CCCCcEEEChHHhcCeEEEEEC
Confidence 2367899877789999999976 5999999999997542 36899 7876542 1245799999999999999999
Q ss_pred CCCeEEE-EEcC
Q 010466 500 SNMRVGF-AEAA 510 (510)
Q Consensus 500 ~~~~iGf-a~a~ 510 (510)
+++|||| |+++
T Consensus 376 ~~~rIGf~A~~~ 387 (403)
T 3aup_A 376 ARSRVGFSTSSL 387 (403)
T ss_dssp TTTEEEEESSCG
T ss_pred CCCEEEEecccc
Confidence 9999999 7763
No 32
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=5.8e-50 Score=415.47 Aligned_cols=328 Identities=17% Similarity=0.219 Sum_probs=245.0
Q ss_pred CccEEecee-ccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCC----------CCcccCCCCCccCCC-----CC
Q 010466 76 DADIVALKN-YMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCY----------FSIACYFHSKYRSGR-----SS 139 (510)
Q Consensus 76 ~~~~~~l~n-~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~----------~~~~C~~~~~y~p~~-----Ss 139 (510)
+...+|++. ..+.+|+++|+||||||++.|++||||+++||+|..|. ....|..++.|++.. ++
T Consensus 7 ~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~ 86 (413)
T 3vla_A 7 SALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACGDCFNGPRP 86 (413)
T ss_dssp SEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEECCSSCCBT
T ss_pred ccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCcccccCCCC
Confidence 455678774 45789999999999999999999999999999996542 144677677787642 34
Q ss_pred ceeECCcEEEEEec-Cce-EEEEEEEeEEEEcc---------eEeccc---eeeecCccccccccceEEeeccccccCCC
Q 010466 140 TYKKNGKSADIHYG-TGA-ISGFFSEDHVKIGD---------LVVKDQ---ATREPSLTFLLAKFDGILGLGFQEISVGK 205 (510)
Q Consensus 140 T~~~~~~~~~~~Y~-~gs-~~G~~~~D~v~~g~---------~~~~~~---~~~~~~~~~~~~~~~GIlGLg~~~~s~~~ 205 (510)
++....|.|.+.|+ +|+ +.|.+++|+|+|++ ..++++ +.............+||||||++..+
T Consensus 87 ~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~~lS--- 163 (413)
T 3vla_A 87 GCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIA--- 163 (413)
T ss_dssp TBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSSSSS---
T ss_pred CCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCCCcc---
Confidence 56667799999994 655 69999999999972 466666 22211111123467999999998876
Q ss_pred CCcHHHHHHHcCCCCCCeEEEEecCCCCCCCCcEEEEcCcCCCC-----cccc-eeEEeccCc--------------cce
Q 010466 206 AVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPDH-----YKGE-HTYVPVTQK--------------GYW 265 (510)
Q Consensus 206 ~~~~l~~l~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~d~~~-----~~g~-l~~~p~~~~--------------~~w 265 (510)
+..+|.+|+.+ +++||+||.+.. ..+|.|+||++|..+ +.|+ +.|+|+... .+|
T Consensus 164 ---l~sql~~~~~i-~~~FS~cL~~~~--~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y 237 (413)
T 3vla_A 164 ---LPSQFASAFSF-KRKFAMCLSGST--SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEY 237 (413)
T ss_dssp ---HHHHHHHHHTC-CSEEEEECCSCS--SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSC
T ss_pred ---hHHHHhhhcCC-CceEEEeCCCCC--CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceE
Confidence 77889999988 899999998842 348999999998753 6788 999999654 699
Q ss_pred EEEeceEEEcCeeeeecC--------CCeeEEEcCCCcCcccCHHHHHHHHHHhcCCcccccccchhhhhhhHHHHHHhh
Q 010466 266 QFDMGDVMIDGQTTGFCA--------GGCAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLL 337 (510)
Q Consensus 266 ~v~l~~i~v~~~~~~~~~--------~~~~aiiDTGtt~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~ 337 (510)
.|++++|+||++.+.++. +...+||||||++++||+++|++|.++|++.. ...-+
T Consensus 238 ~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~-----------------~~~~~ 300 (413)
T 3vla_A 238 FIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKES-----------------AARNI 300 (413)
T ss_dssp EECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHH-----------------HHTTC
T ss_pred EEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHh-----------------cccCC
Confidence 999999999999886532 35789999999999999999999999986530 00000
Q ss_pred ccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhccc
Q 010466 338 AKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDR 417 (510)
Q Consensus 338 ~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~ 417 (510)
.+..+. .....|+.
T Consensus 301 ~~~~~~------------------------------------------------------------------~~~~~C~~ 314 (413)
T 3vla_A 301 TRVASV------------------------------------------------------------------APFGACFS 314 (413)
T ss_dssp CEECCC------------------------------------------------------------------TTCSCEEE
T ss_pred CcCCCC------------------------------------------------------------------CCCcceec
Confidence 000000 00012222
Q ss_pred CCCCCCceeeeCCC----CCCCCcEEEEECC--EEEeeCcccceeeecCCCCceeEeceeecccCCCCCCeeEEChhhhc
Q 010466 418 LPSPMGESAVDCSR----LSSLPIVSFTIGG--KIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMG 491 (510)
Q Consensus 418 ~~~~~~~~~~~c~~----~~~~P~i~f~~~g--~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~ 491 (510)
.+ |.. ...+|+|+|+|+| +.|+|++++|+++..+ ...|+ +|...+. ..++.||||+.|||
T Consensus 315 ~~---------~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl-~~~~~~~--~~~~~~IlGd~fl~ 380 (413)
T 3vla_A 315 TD---------NILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCL-GVVDGGS--NLRTSIVIGGHQLE 380 (413)
T ss_dssp CT---------TCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEE-CEEEEES--SCSSSEEECHHHHT
T ss_pred cC---------CccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEE-EEEecCC--CcccceeEehhhhc
Confidence 21 110 1278999999977 8999999999998653 36898 5665442 12468999999999
Q ss_pred ceEEEEECCCCeEEEEEc
Q 010466 492 PYHTVFDYSNMRVGFAEA 509 (510)
Q Consensus 492 ~~yvvfD~~~~~iGfa~a 509 (510)
++|+|||++++|||||++
T Consensus 381 ~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 381 DNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp TEEEEEETTTTEEEEEEE
T ss_pred CeEEEEECCCCEEEEEEe
Confidence 999999999999999986
No 33
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.4e-47 Score=392.92 Aligned_cols=320 Identities=15% Similarity=0.208 Sum_probs=231.0
Q ss_pred EEece-eccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCC-------CCcccCCCCCccCCCCCcee-------E
Q 010466 79 IVALK-NYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCY-------FSIACYFHSKYRSGRSSTYK-------K 143 (510)
Q Consensus 79 ~~~l~-n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~-------~~~~C~~~~~y~p~~SsT~~-------~ 143 (510)
.+||. ++.+.+|+++|+|||| |+|||||+++||+|..|. ....|..++.|++..+ ++. .
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~s~~C~~~~~~~~~sc-~~~~~~~~~~~ 77 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGC-PAPSCGSDKHD 77 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCTTC-CCCCC------
T ss_pred EEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCCCchhccccCCCCCCC-CCccCCcCcCC
Confidence 46777 6778999999999997 999999999999996542 0345666667877633 322 2
Q ss_pred CCc-EEEEEecCceE-EEEEEEeEEEEcc----eEeccce------eee-c-CccccccccceEEeeccccccCCCCCcH
Q 010466 144 NGK-SADIHYGTGAI-SGFFSEDHVKIGD----LVVKDQA------TRE-P-SLTFLLAKFDGILGLGFQEISVGKAVPV 209 (510)
Q Consensus 144 ~~~-~~~~~Y~~gs~-~G~~~~D~v~~g~----~~~~~~~------~~~-~-~~~~~~~~~~GIlGLg~~~~s~~~~~~~ 209 (510)
..| .|.+.|++|+. +|.+++|+|++++ ..++++. ... . ...+ ....+||||||++..+ +
T Consensus 78 ~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------~ 150 (381)
T 1t6e_X 78 KPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------L 150 (381)
T ss_dssp CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------H
T ss_pred CccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------h
Confidence 345 59999999985 8999999999985 4555541 111 1 1111 3568999999998775 6
Q ss_pred HHHHHHcCCCCCCeEEEEecCCCCCCCCcEEEEcCcCCC--CcccceeEEeccCc---cceEEEeceEEEcCeeeeecCC
Q 010466 210 WYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGMDPD--HYKGEHTYVPVTQK---GYWQFDMGDVMIDGQTTGFCAG 284 (510)
Q Consensus 210 l~~l~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~d~~--~~~g~l~~~p~~~~---~~w~v~l~~i~v~~~~~~~~~~ 284 (510)
..+|.+|++ .+++||+||.+. ..|+|+|||+|.. ++.|++.|+|+... .+|.|.+++|+|+++.+.++..
T Consensus 151 ~~ql~~~~~-~~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 225 (381)
T 1t6e_X 151 PAQVASAQK-VANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEG 225 (381)
T ss_dssp HHHHHHHHT-CCSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTT
T ss_pred HHHHhhhcc-cCceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHH
Confidence 678998885 479999999875 2899999998765 47899999999653 4677999999999998865433
Q ss_pred ---CeeEEEcCCCcCcccCHHHHHHHHHHhcCCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccc
Q 010466 285 ---GCAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVS 361 (510)
Q Consensus 285 ---~~~aiiDTGtt~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~ 361 (510)
...+||||||++++||+++|++|.+++.+.. .... .+. +++.
T Consensus 226 ~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~---------~~~~----~~g--~~~~-------------------- 270 (381)
T 1t6e_X 226 ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKAL---------AAQH----ANG--APVA-------------------- 270 (381)
T ss_dssp CSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHH---------HHC-------------C--------------------
T ss_pred HccCCCEEEECCCccEEeCHHHHHHHHHHHHHhh---------cccc----ccc--cccc--------------------
Confidence 3569999999999999999999999886530 0000 000 0000
Q ss_pred cccccccccCCcCCCCCCCCccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCCC---------
Q 010466 362 MGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSRL--------- 432 (510)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~~--------- 432 (510)
+.. ....+..+|...
T Consensus 271 -------------------------------------------------------~~~-~~~~~~~~C~~~~~~~~~~~~ 294 (381)
T 1t6e_X 271 -------------------------------------------------------RAV-EAVAPFGVCYDTKTLGNNLGG 294 (381)
T ss_dssp -------------------------------------------------------CEE-CCCTTCSCEEEGGGCCEETTE
T ss_pred -------------------------------------------------------ccC-CCCCCCCccCCCCCCcccccC
Confidence 000 000011334322
Q ss_pred CCCCcEEEEEC-CEEEeeCcccceeeecCCCCceeEeceeecccC---CCCCCeeEEChhhhcceEEEEECCCCeEEEEE
Q 010466 433 SSLPIVSFTIG-GKIFDLTPDQYILKVGEGDAAQCISGFSALDVA---PPRGPLWILGDVFMGPYHTVFDYSNMRVGFAE 508 (510)
Q Consensus 433 ~~~P~i~f~~~-g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~---~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfa~ 508 (510)
..+|+|+|+|+ |++++|++++|+++..+ ...|+ +|...+.. ....+.||||+.|||++|+|||++++|||||+
T Consensus 295 ~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl-~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~ 371 (381)
T 1t6e_X 295 YAVPNVQLGLDGGSDWTMTGKNSMVDVKQ--GTACV-AFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSR 371 (381)
T ss_dssp ECCCCEEEEETTSCEEEECHHHHEEEEET--TEEEE-SEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred CcCCeEEEEECCCcEEEeCCCeEEEEcCC--CeEEE-EEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEec
Confidence 26899999996 59999999999998643 36898 57654321 01235799999999999999999999999999
Q ss_pred cC
Q 010466 509 AA 510 (510)
Q Consensus 509 a~ 510 (510)
++
T Consensus 372 ~~ 373 (381)
T 1t6e_X 372 LP 373 (381)
T ss_dssp CC
T ss_pred cc
Confidence 74
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=2.6e-46 Score=360.52 Aligned_cols=233 Identities=70% Similarity=1.180 Sum_probs=209.3
Q ss_pred cEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCceE
Q 010466 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAI 157 (510)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs~ 157 (510)
..+||.|+.+.+|+++|.||||+|++.|+|||||+++||+|..|.....|..++.|+|++|+||+..++.|.+.|++|++
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 82 (239)
T 1b5f_A 3 AVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGSI 82 (239)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEE
T ss_pred ceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCcE
Confidence 46899999999999999999999999999999999999999999645679989999999999999999999999999999
Q ss_pred EEEEEEeEEEEcceEeccc----eeeecCccccccccceEEeeccccccCCCCCcHHHHHHHcCCCCCCeEEEEecCCCC
Q 010466 158 SGFFSEDHVKIGDLVVKDQ----ATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNAD 233 (510)
Q Consensus 158 ~G~~~~D~v~~g~~~~~~~----~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~l~~l~~qg~i~~~~FSl~l~~~~~ 233 (510)
.|.+++|+|++++..++++ +....+..|.....+||||||++..+ .|++++|++|+.|++++||+||.+..+
T Consensus 83 ~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~~~FS~~l~~~~~ 158 (239)
T 1b5f_A 83 TGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNVD 158 (239)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSCS
T ss_pred EEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCCCEEEEEEeCCCC
Confidence 9999999999999999888 22233334555678999999998775 678899999999999999999988643
Q ss_pred CCCCcEEEEcCcCCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHHHhcC
Q 010466 234 EEEGGEIVFGGMDPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGA 313 (510)
Q Consensus 234 ~~~~G~L~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~l~~ 313 (510)
....|+|+|||+|++++.|++.|+|+.+.++|.|.+++|.|+++.+.++.....++|||||+++++|++++++|.+++++
T Consensus 159 ~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 159 EEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp SSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred CCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 34589999999999999999999999888999999999999999887666778999999999999999999999999986
Q ss_pred C
Q 010466 314 T 314 (510)
Q Consensus 314 ~ 314 (510)
+
T Consensus 239 ~ 239 (239)
T 1b5f_A 239 N 239 (239)
T ss_dssp C
T ss_pred C
Confidence 3
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=4.4e-42 Score=331.72 Aligned_cols=236 Identities=47% Similarity=0.914 Sum_probs=200.7
Q ss_pred ceEeccc----eeeecCccccccccceEEeeccccccCCCCCcHHHHHHHcCCCCCCeEEEEecCCCCCCCCcEEEEcCc
Q 010466 170 DLVVKDQ----ATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEEEGGEIVFGGM 245 (510)
Q Consensus 170 ~~~~~~~----~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~l~~l~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg~ 245 (510)
+.++++| +....+..|.....+||||||++..+....+|++++|++||.|++++||+||++..+....|+|+|||+
T Consensus 2 g~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~ 81 (241)
T 1lya_B 2 GVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGT 81 (241)
T ss_dssp CEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSC
T ss_pred CeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCc
Confidence 4555555 222334445566789999999998887778899999999999999999999988754334899999999
Q ss_pred CCCCcccceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHHHHHHHHHHhcCCcccccccchhh
Q 010466 246 DPDHYKGEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTTIITQVNHAIGATGIVSQECKAVV 325 (510)
Q Consensus 246 d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~ 325 (510)
|+++|.|++.|+|+.+.++|.|.+++|+|+++.+. +..+..+++||||+++++|++++++|.+++++..
T Consensus 82 d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~---------- 150 (241)
T 1lya_B 82 DSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP---------- 150 (241)
T ss_dssp CGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE----------
T ss_pred CHHHcCCceEEEECccccEEEEEEeEEEECCeeEe-ccCCCEEEEECCCccccCCHHHHHHHHHHhCCee----------
Confidence 99999999999999999999999999999998753 4567899999999999999999999999997641
Q ss_pred hhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHHHHHHHHhhhhhhHH
Q 010466 326 SQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVVWMQNQLKQNQTQE 405 (510)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 405 (510)
T Consensus 151 -------------------------------------------------------------------------------- 150 (241)
T 1lya_B 151 -------------------------------------------------------------------------------- 150 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhhhcccCCCCCCceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEeceeecccCCCCCCeeEE
Q 010466 406 RILNYVNELCDRLPSPMGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWIL 485 (510)
Q Consensus 406 ~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~IL 485 (510)
...+.|.+||+....+|+|+|+|+|++++|+|++|+++..+.+...|+++|+..+.+.+..+.|||
T Consensus 151 --------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~il 216 (241)
T 1lya_B 151 --------------LIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWIL 216 (241)
T ss_dssp --------------EETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEE
T ss_pred --------------ccCCcEEEECCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEe
Confidence 113568999998778999999999999999999999987654457899999887654445678999
Q ss_pred ChhhhcceEEEEECCCCeEEEEEcC
Q 010466 486 GDVFMGPYHTVFDYSNMRVGFAEAA 510 (510)
Q Consensus 486 G~~fl~~~yvvfD~~~~~iGfa~a~ 510 (510)
|++|||++|+|||++++|||||+++
T Consensus 217 G~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 217 GDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp CHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred chHHhcceEEEEECCCCEEEEEEcC
Confidence 9999999999999999999999986
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.90 E-value=1.3e-23 Score=171.94 Aligned_cols=93 Identities=66% Similarity=1.122 Sum_probs=86.9
Q ss_pred cEEeceeccCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCC-CcccCCCCCccCCCCCceeECCcEEEEEecCce
Q 010466 78 DIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYF-SIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA 156 (510)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~-~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs 156 (510)
..+||.|+.+..|+++|.||||||++.|+|||||+++||+|..|.. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~~~~~i~Yg~Gs 82 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGS 82 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCCCcEEEEECCcE
Confidence 3589999999999999999999999999999999999999999952 247988999999999999999999999999999
Q ss_pred EEEEEEEeEEEEcc
Q 010466 157 ISGFFSEDHVKIGD 170 (510)
Q Consensus 157 ~~G~~~~D~v~~g~ 170 (510)
+.|.+++|+|+|++
T Consensus 83 ~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 83 LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEEEEESC
T ss_pred EEEEEEEEEEEECC
Confidence 99999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.84 E-value=8.1e-21 Score=152.63 Aligned_cols=87 Identities=74% Similarity=1.246 Sum_probs=77.1
Q ss_pred CceeeeCCCCCCCCcEEEEECCEEEeeCcccceeeecCCCCceeEeceeecccCCCCCCeeEEChhhhcceEEEEECCCC
Q 010466 423 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNM 502 (510)
Q Consensus 423 ~~~~~~c~~~~~~P~i~f~~~g~~~~i~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~ 502 (510)
|.|.+||+.++.+|+|+|+|+|++++|+|++|+.+...++...|+++|++.+.+ +.++.||||++|||++|+|||++++
T Consensus 1 G~y~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~-~~~~~~ILGd~Fl~~~y~vfD~~~~ 79 (87)
T 1b5f_B 1 EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDAT-LLGPLWILGDVFMRPYHTVFDYGNL 79 (87)
T ss_dssp CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCB-SSSBEEEECHHHHTTEEEEEETTTT
T ss_pred CcEEEECCCCCcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCC-CCCCeEEechHHhccEEEEEECCCC
Confidence 579999998888999999999999999999999986654456899999987653 4456899999999999999999999
Q ss_pred eEEEEEcC
Q 010466 503 RVGFAEAA 510 (510)
Q Consensus 503 ~iGfa~a~ 510 (510)
|||||+++
T Consensus 80 riGfA~~~ 87 (87)
T 1b5f_B 80 LVGFAEAA 87 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99999986
No 38
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=99.65 E-value=4.9e-17 Score=135.16 Aligned_cols=106 Identities=51% Similarity=0.915 Sum_probs=77.4
Q ss_pred CCcccccccchhhhhhhHHHHHHhhccCCccchhccCcccccCCCCccccccccccccCCcCCCCCCCCccchhhHHHHH
Q 010466 313 ATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDGSRGVSMGIESVVPENNHRASGGFHDAMCSTCEMAVV 392 (510)
Q Consensus 313 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (510)
+.+.++..|+.++++|++.++++|++.++|+++|.+.|+|..++.+.+++.++.++.+.... +...++..|++|+++++
T Consensus 3 a~g~~~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~~~~i~~vv~~~~~~-~~~~~~~~C~~Ce~~V~ 81 (108)
T 3rfi_A 3 AMAIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERETEG-SSVGEAPLCTACEMAVV 81 (108)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC-------------------------CCHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCccccccccccccccccccc-ccCCCCCcChhHHHHHH
Confidence 45567889999999999999999999999999999999999988877777776666543211 11247999999999999
Q ss_pred HHHHHhhhhhhHHHHHHhhhhhcccCC
Q 010466 393 WMQNQLKQNQTQERILNYVNELCDRLP 419 (510)
Q Consensus 393 ~~~~~~~~~~t~~~~~~~~~~~c~~~~ 419 (510)
|++++|++|.|+++|+++++++|.++|
T Consensus 82 ~ie~~L~~N~Te~eI~~~l~k~C~~LP 108 (108)
T 3rfi_A 82 WMQNQLKQEGTKEKVLEYVNQLCEKIP 108 (108)
T ss_dssp HHHHHHTSHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhcCchHHHHHHHHHHHHhhCc
Confidence 999999999999999999999999886
No 39
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=97.15 E-value=0.00019 Score=54.50 Aligned_cols=38 Identities=21% Similarity=0.265 Sum_probs=36.1
Q ss_pred ccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCC
Q 010466 382 AMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPS 420 (510)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~ 420 (510)
..|.+|+++++.++..+ +|.|+++|++.++++|..+|.
T Consensus 2 ~~C~~C~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~ 39 (74)
T 1l9l_A 2 RDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRS 39 (74)
T ss_dssp HHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCH
T ss_pred CCChHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHhCCh
Confidence 47999999999999999 999999999999999999985
No 40
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=97.14 E-value=0.00024 Score=54.91 Aligned_cols=47 Identities=28% Similarity=0.655 Sum_probs=41.6
Q ss_pred CccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCC
Q 010466 381 DAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCS 430 (510)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~ 430 (510)
+..|+.|+++++++++.|..|.|+++|.+++++.|..+|.. +...|.
T Consensus 2 ~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~~---~~~~C~ 48 (80)
T 3bqp_A 2 GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP---YQKQCD 48 (80)
T ss_dssp CTTHHHHHHHHHHHHHHSCTTCCHHHHHHHHHHHGGGSCGG---GHHHHH
T ss_pred cCcchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCCCc---cchhhH
Confidence 56899999999999999999999999999999999999863 344564
No 41
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=97.11 E-value=0.00023 Score=56.63 Aligned_cols=48 Identities=27% Similarity=0.711 Sum_probs=42.5
Q ss_pred CCccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCC
Q 010466 380 HDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCS 430 (510)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~ 430 (510)
++..|..|+++++++++.|+.|.|+++|.+++++.|..+|... ...|.
T Consensus 4 ~~~~C~~C~~vv~~i~~~l~~n~t~~~I~~~l~~~C~~lp~~~---~~~C~ 51 (91)
T 2qyp_A 4 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSL---SEECQ 51 (91)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHTSCSST---TTTHH
T ss_pred CCCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHCCCCc---ccchH
Confidence 5678999999999999999999999999999999999999653 34564
No 42
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=96.99 E-value=0.00043 Score=53.91 Aligned_cols=41 Identities=39% Similarity=0.711 Sum_probs=38.5
Q ss_pred CccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCC
Q 010466 381 DAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSP 421 (510)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~ 421 (510)
+..|..|+++++++++.+++|.|+++|.+++++.|..+|..
T Consensus 3 ~~~C~~C~~~v~~~~~~l~~n~t~~~I~~~l~~~C~~lp~~ 43 (83)
T 4ddj_A 3 SLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKP 43 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTSCTT
T ss_pred CCcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHhCCCc
Confidence 45799999999999999999999999999999999999864
No 43
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=96.84 E-value=0.00056 Score=52.47 Aligned_cols=40 Identities=18% Similarity=0.559 Sum_probs=37.4
Q ss_pred CccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCC
Q 010466 381 DAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSP 421 (510)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~ 421 (510)
+..|..|+++++.+++.+..| |+++|++++++.|..+|..
T Consensus 2 ~~~C~~C~~vv~~ve~~l~~n-t~~~I~~~l~~~C~~lp~~ 41 (77)
T 1of9_A 2 EILCNLCTGLINTLENLLTTK-GADKVKDYISSLCNKASGF 41 (77)
T ss_dssp CSSHHHHHHHHHHHHHHCSSS-CSHHHHHHHHHHHTTCSST
T ss_pred CCcchhHHHHHHHHHHHHHHC-cHHHHHHHHHHHHHcCChH
Confidence 568999999999999999999 9999999999999999754
No 44
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=96.69 E-value=0.001 Score=51.73 Aligned_cols=41 Identities=29% Similarity=0.696 Sum_probs=38.3
Q ss_pred CCccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCC
Q 010466 380 HDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPS 420 (510)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~ 420 (510)
++..|..|++++++++..|..|.|+++|.+.+++.|..+|.
T Consensus 3 ~~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~ 43 (83)
T 2gtg_A 3 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK 43 (83)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCH
T ss_pred CCCcChhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHCCC
Confidence 46789999999999999999999999999999999999984
No 45
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=96.47 E-value=0.0012 Score=50.79 Aligned_cols=39 Identities=13% Similarity=0.489 Sum_probs=37.1
Q ss_pred ccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCC
Q 010466 382 AMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPS 420 (510)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~ 420 (510)
..|..|+++++.+++.+.+|.|+++|++.+++.|..+|.
T Consensus 2 ~~C~~C~~iv~~ve~~l~~~~t~~~I~~~l~~~C~~lp~ 40 (78)
T 1nkl_A 2 YFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI 40 (78)
T ss_dssp CHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS
T ss_pred CcchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhhCch
Confidence 469999999999999999999999999999999999985
No 46
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=96.31 E-value=0.0022 Score=49.57 Aligned_cols=41 Identities=29% Similarity=0.520 Sum_probs=38.3
Q ss_pred CccchhhHHHHHHHHHHhhhhhhH-HHHHHhhhhhcccCCCC
Q 010466 381 DAMCSTCEMAVVWMQNQLKQNQTQ-ERILNYVNELCDRLPSP 421 (510)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~t~-~~~~~~~~~~c~~~~~~ 421 (510)
+..|..|+++++.++..+..|.|+ ++|.+.+++.|..+|..
T Consensus 3 ~~~C~~C~~~V~~ve~~l~~n~t~~~~I~~~l~~~C~~lp~~ 44 (81)
T 1n69_A 3 GDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPG 44 (81)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCTT
T ss_pred CCcchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHcCcH
Confidence 467999999999999999999999 99999999999999853
No 47
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=96.21 E-value=0.0036 Score=49.54 Aligned_cols=40 Identities=38% Similarity=0.802 Sum_probs=35.1
Q ss_pred cccccchhhhhhhHHHHHHhhccCCccchhccCcccccCC
Q 010466 317 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTFDG 356 (510)
Q Consensus 317 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~~~ 356 (510)
+...|+.++++|++.+++++.+..+|+.+|...|+|..+.
T Consensus 46 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~~~ 85 (91)
T 2qyp_A 46 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR 85 (91)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC----
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCCCcc
Confidence 6889999999999999999999999999999999998643
No 48
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=95.67 E-value=0.0032 Score=48.34 Aligned_cols=37 Identities=27% Similarity=0.707 Sum_probs=35.4
Q ss_pred cccccchhhhhhhHHHHHHhhccCCccchhccCcccc
Q 010466 317 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCT 353 (510)
Q Consensus 317 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~ 353 (510)
+...|+.++++|++.+++++.+.++|+.+|...|+|.
T Consensus 43 ~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~ 79 (80)
T 3bqp_A 43 YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACP 79 (80)
T ss_dssp GHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSC
T ss_pred cchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCC
Confidence 6788999999999999999999999999999999995
No 49
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=95.49 E-value=0.0019 Score=51.95 Aligned_cols=51 Identities=16% Similarity=0.327 Sum_probs=43.1
Q ss_pred CCCccchhhHHHHHHHHHHhhhhhhHHHHHHhhhhhcccCCCCCCceeeeCCC
Q 010466 379 FHDAMCSTCEMAVVWMQNQLKQNQTQERILNYVNELCDRLPSPMGESAVDCSR 431 (510)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~c~~~~~~~~~~~~~c~~ 431 (510)
..+..|..|+++++.+++.+ |.|+++|++.+++.|..+|.....+.-.|..
T Consensus 19 ~~~~~C~~C~~vV~~ve~~l--n~t~~~I~~~L~~~C~~lp~~ipf~~~~C~~ 69 (99)
T 2js9_A 19 RSALSCQMCELVVKKYEGSA--DKDANVIKKDFDAECKKLFHTIPFGTRECDH 69 (99)
T ss_dssp CCSSTHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHHTGGGGSTTHHHHHHT
T ss_pred CCCCcchhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHcCCCcchHHHHHHHH
Confidence 35788999999999999999 8999999999999999998553335556764
No 50
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=95.41 E-value=0.004 Score=49.98 Aligned_cols=38 Identities=24% Similarity=0.551 Sum_probs=35.7
Q ss_pred ccccccchhhhhhhHHHHHHhhccCCccchhccCcccc
Q 010466 316 IVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCT 353 (510)
Q Consensus 316 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~ 353 (510)
++...|+.++++|++.++++|.++..|+.+|.+.++|+
T Consensus 62 f~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~L~lC~ 99 (99)
T 2js9_A 62 FGTRECDHYVNSKVDPIIHELEGGTAPKDVCTKLNECP 99 (99)
T ss_dssp THHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCC
Confidence 36788999999999999999999999999999999995
No 51
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=95.38 E-value=0.0048 Score=47.28 Aligned_cols=37 Identities=27% Similarity=0.582 Sum_probs=35.4
Q ss_pred cccccchhhhhhhHHHHHHhhccCCccchhccCcccc
Q 010466 317 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCT 353 (510)
Q Consensus 317 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~ 353 (510)
+...|+.++++|++.+++++.++.+|+.+|...|+|.
T Consensus 41 ~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~ 77 (78)
T 1nkl_A 41 LRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICK 77 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCC
Confidence 6788999999999999999999999999999999995
No 52
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=95.29 E-value=0.0047 Score=47.85 Aligned_cols=38 Identities=39% Similarity=0.853 Sum_probs=35.2
Q ss_pred cccccchhhhhhhHHHHHHhhccCCccchhccCccccc
Q 010466 317 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCTF 354 (510)
Q Consensus 317 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~~ 354 (510)
+...|+.++++|++.+++.+.+.++|+.+|...|+|..
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~ 82 (83)
T 2gtg_A 45 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSG 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC-
T ss_pred chhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCCCC
Confidence 56789999999999999999999999999999999963
No 53
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=94.85 E-value=0.006 Score=46.61 Aligned_cols=37 Identities=22% Similarity=0.512 Sum_probs=34.9
Q ss_pred ccccccchhhhhhhHHHHHHhhccCCccchhccCccc
Q 010466 316 IVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLC 352 (510)
Q Consensus 316 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c 352 (510)
.+...|+.++++|++.+++++.+..+|+.+|...|+|
T Consensus 41 ~~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC 77 (77)
T 1of9_A 41 FIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 77 (77)
T ss_dssp TTHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 4678899999999999999999999999999999988
No 54
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=94.78 E-value=0.0079 Score=46.42 Aligned_cols=36 Identities=36% Similarity=0.860 Sum_probs=32.4
Q ss_pred cccccchhhhhhhHHHHHHhhccCCccchhccCcccc
Q 010466 317 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLCT 353 (510)
Q Consensus 317 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c~ 353 (510)
++..|+.++++|++.+++.+. .++|+++|.+.|+|.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~lglC~ 80 (81)
T 1n69_A 45 MADICKNYISQYSEIAIQMMM-HMQPKEICALVGFCD 80 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCHHHHHhhcCCCC
Confidence 678899999999998887776 699999999999995
No 55
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=94.59 E-value=0.0069 Score=46.92 Aligned_cols=37 Identities=30% Similarity=0.730 Sum_probs=34.4
Q ss_pred cccccchhhhhhhHHHHHHhhccC-CccchhccCcccc
Q 010466 317 VSQECKAVVSQYGEEIINMLLAKD-EPQKICSQIGLCT 353 (510)
Q Consensus 317 ~~~~c~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~c~ 353 (510)
+...|+.+++.|++.+++++.+.+ +|+.+|...|+|.
T Consensus 45 ~~~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~ 82 (83)
T 4ddj_A 45 MSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCE 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCC
Confidence 477899999999999999999995 9999999999996
No 56
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=93.62 E-value=0.022 Score=43.03 Aligned_cols=33 Identities=24% Similarity=0.590 Sum_probs=30.6
Q ss_pred cccccchhhhhhhHHHHHHhhccCCccchhccC
Q 010466 317 VSQECKAVVSQYGEEIINMLLAKDEPQKICSQI 349 (510)
Q Consensus 317 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (510)
+...|+.++++|+++++++|+++..|+.+|.+.
T Consensus 41 ~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~i 73 (74)
T 1l9l_A 41 WRDVCRNFMRRYQSRVIQGLVAGETAQQICEDL 73 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhc
Confidence 567899999999999999999999999999864
No 57
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=88.75 E-value=0.99 Score=38.52 Aligned_cols=26 Identities=12% Similarity=0.046 Sum_probs=23.3
Q ss_pred eeEEChhhhcceEEEEECCCCeEEEE
Q 010466 482 LWILGDVFMGPYHTVFDYSNMRVGFA 507 (510)
Q Consensus 482 ~~ILG~~fl~~~yvvfD~~~~~iGfa 507 (510)
..|||..||+.+-+.+|++++++-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 36999999999999999999998773
No 58
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=87.81 E-value=2.1 Score=36.63 Aligned_cols=26 Identities=12% Similarity=0.052 Sum_probs=23.2
Q ss_pred eeEEChhhhcceEEEEECCCCeEEEE
Q 010466 482 LWILGDVFMGPYHTVFDYSNMRVGFA 507 (510)
Q Consensus 482 ~~ILG~~fl~~~yvvfD~~~~~iGfa 507 (510)
..|||..||+.+-.+.|++++++-|.
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~ 133 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIG 133 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEc
Confidence 46999999999999999999998663
No 59
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=82.95 E-value=0.84 Score=35.25 Aligned_cols=51 Identities=24% Similarity=0.375 Sum_probs=41.1
Q ss_pred HHHHHHHHHh-cCCcccccccchhhhhhhHHHHHHhhccCCccchhccCccc
Q 010466 302 TIITQVNHAI-GATGIVSQECKAVVSQYGEEIINMLLAKDEPQKICSQIGLC 352 (510)
Q Consensus 302 ~~~~~l~~~l-~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~c 352 (510)
..+++.=+.+ ++..+.+..|+.|++.|.+.++..|..+..|+.+|...+.|
T Consensus 36 ~~~d~~Ckk~~~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~~C 87 (87)
T 3s64_A 36 KEFIQGCMTLIGWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLHAC 87 (87)
T ss_dssp HHHHHHHHHHHCSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHHCC
T ss_pred HHHHHHHHHhcccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhccC
Confidence 3444444444 44556678999999999999999999999999999988877
No 60
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=77.07 E-value=2.8 Score=33.20 Aligned_cols=30 Identities=23% Similarity=0.258 Sum_probs=25.4
Q ss_pred EEEEEeecCCCceEEEEecCCCCceeeeCCCC
Q 010466 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC 121 (510)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C 121 (510)
=++.+.|| +|.+.+++|||.+++-+...++
T Consensus 9 P~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~~ 38 (99)
T 2hs1_A 9 PLVTIKIG--GQLKEALLDTGADDTIIEEMSL 38 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSEEESCCSS
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEecccC
Confidence 35779999 6999999999999999976554
No 61
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=76.43 E-value=2.3 Score=34.02 Aligned_cols=26 Identities=19% Similarity=0.209 Sum_probs=23.2
Q ss_pred EEEEEeecCCCceEEEEecCCCCceeee
Q 010466 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVP 117 (510)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~ 117 (510)
-++.|.|| +|.+.+++|||.+++-+.
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 46789999 699999999999999887
No 62
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=75.24 E-value=2.2 Score=36.27 Aligned_cols=91 Identities=18% Similarity=0.148 Sum_probs=50.5
Q ss_pred cCceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCce--EEEEEEE
Q 010466 86 MDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGA--ISGFFSE 163 (510)
Q Consensus 86 ~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~gs--~~G~~~~ 163 (510)
....+++++.|+ ++++.+++|||++.+.+... +. ..++-....+..-.. ...+.|. ..|.+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~~-~a--~~lgl~~~~~~~~~~----------~a~g~g~~~~~~~~~~ 87 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMSTR-LA--KKTGLSRMIDKRFIG----------EARGVGTGKIIGRIHQ 87 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEHH-HH--HHHTGGGGCBCCCC---------------------CEEEEE
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCHH-HH--HHcCCCccCCcceEE----------EEecCCCcccccEEEE
Confidence 356789999998 58999999999999887532 21 112111111111100 1112121 2466667
Q ss_pred eEEEEcceEeccceeeecCccccccccceEEeec
Q 010466 164 DHVKIGDLVVKDQATREPSLTFLLAKFDGILGLG 197 (510)
Q Consensus 164 D~v~~g~~~~~~~~~~~~~~~~~~~~~~GIlGLg 197 (510)
+.+.+|+........... ...+||||+.
T Consensus 88 ~~i~ig~~~~~~~~~vl~------~~~d~iLG~d 115 (148)
T 2i1a_A 88 AQVKIETQYIPCSFTVLD------TDIDVLIGLD 115 (148)
T ss_dssp EEEEETTEEEEEEEEEEC------SSCSEEECHH
T ss_pred EEEEECCEEeceeEEEec------CCCCeEecHH
Confidence 789999877542211111 2468999987
No 63
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=73.04 E-value=4.1 Score=32.23 Aligned_cols=29 Identities=24% Similarity=0.223 Sum_probs=24.9
Q ss_pred EEEEeecCCCceEEEEecCCCCceeeeCCCC
Q 010466 91 FGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC 121 (510)
Q Consensus 91 ~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C 121 (510)
++.+.|| +|.+.+++|||.+++-+...++
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~~~ 38 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGIEL 38 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSCCC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCccc
Confidence 6779999 6999999999999999975544
No 64
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=69.51 E-value=3.8 Score=33.16 Aligned_cols=32 Identities=16% Similarity=0.298 Sum_probs=26.2
Q ss_pred EEEEeec---CCCceEEEEecCCCCceeeeCCCCC
Q 010466 91 FGEIGIG---TPPQNFTVIFDTGSSNLWVPSSKCY 122 (510)
Q Consensus 91 ~~~i~iG---tP~Q~~~v~lDTGSs~~Wv~~~~C~ 122 (510)
.+.|.|| +|+|.+..++|||.+++-+...++.
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 5566665 8899999999999999999866553
No 65
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=62.57 E-value=6.3 Score=32.12 Aligned_cols=27 Identities=15% Similarity=0.091 Sum_probs=22.8
Q ss_pred EEEEEeecCCCceEEEEecCCCCceeeeCC
Q 010466 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPSS 119 (510)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~ 119 (510)
=++ |.|| +|.+.+++|||.+++-+...
T Consensus 15 P~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 15 EIL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred CEE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 345 9999 69999999999999988753
No 66
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=61.73 E-value=5.9 Score=33.79 Aligned_cols=91 Identities=15% Similarity=0.231 Sum_probs=53.1
Q ss_pred CceEEEEEeecCCCceEEEEecCCCCceeeeCCCCCCCcccCCCCCccCCCCCceeECCcEEEEEecCc--eEEEEEEEe
Q 010466 87 DAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTG--AISGFFSED 164 (510)
Q Consensus 87 ~~~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Y~~g--s~~G~~~~D 164 (510)
-..|++++.|+ ++++++++|||++.+.+.. .|. ..|+-...-+. . +. - ...+-| ...|.+...
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~-~~A--~rlGL~~~~~~-~---~~-----~-~a~g~G~~~~~g~v~~~ 86 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQ-ACA--ERCNIMRLVDR-R---WA-----G-VAKGVGTQRIIGRVHLA 86 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH-HHH--HHTTCGGGEEG-G---GC-----E-ECCC---CEEEEEEEEE
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCH-HHH--HHcCCccccCc-c---ee-----E-EEEcCCccEEEEEEEEE
Confidence 34689999998 5999999999999998864 221 12221100000 0 00 0 011112 246777778
Q ss_pred EEEEcceEeccceeeecCccccccccceEEeec
Q 010466 165 HVKIGDLVVKDQATREPSLTFLLAKFDGILGLG 197 (510)
Q Consensus 165 ~v~~g~~~~~~~~~~~~~~~~~~~~~~GIlGLg 197 (510)
.+.+|+..+...+.... ....++|||+-
T Consensus 87 ~I~Ig~~~~~~~~~Vle-----~~~~d~LLGmD 114 (148)
T 3s8i_A 87 QIQIEGDFLQCSFSILE-----DQPMDMLLGLD 114 (148)
T ss_dssp EEEETTEEEEEEEEEET-----TCSSSEEECHH
T ss_pred EEEECCEEEEEEEEEeC-----CCCcCeeccHH
Confidence 99999976643322222 22358999997
No 67
>3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens}
Probab=58.87 E-value=8.6 Score=25.13 Aligned_cols=24 Identities=21% Similarity=0.037 Sum_probs=19.6
Q ss_pred ceEEeeeeeccCchhhhhhhcccc
Q 010466 29 GLYRIGLKKRKFDLNNRVAARLDS 52 (510)
Q Consensus 29 ~~~~ipl~~~~~~~~~~~~~~~~~ 52 (510)
.++||||++.++.++.+.+.+...
T Consensus 7 ~l~RIPL~k~kS~R~~l~e~g~~~ 30 (43)
T 3vcm_P 7 TFKRIFLKRMPSIRESLKERGVDM 30 (43)
T ss_dssp CCEEEEEEECCCHHHHHHHHTCCG
T ss_pred ceeEEeeeecccHHHHHHHcCchH
Confidence 568999999999988888776543
No 68
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=57.02 E-value=10 Score=30.75 Aligned_cols=30 Identities=13% Similarity=0.087 Sum_probs=25.2
Q ss_pred EEEEEeecCCCceEEEEecCCCCceeeeCCCC
Q 010466 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC 121 (510)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C 121 (510)
=.+.+.|| +|.+..++|||.+++-+...++
T Consensus 10 P~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 10 PSLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred CeEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 36778898 6999999999999999976554
No 69
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=49.79 E-value=18 Score=30.16 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=25.0
Q ss_pred eEEEEEeecCCCceEEEEecCCCCceeeeCCC
Q 010466 89 QYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSK 120 (510)
Q Consensus 89 ~Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~ 120 (510)
.-++.+.|+ +|.+.+++|||.+++-+....
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEcccc
Confidence 347779998 699999999999999887543
No 70
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=42.39 E-value=19 Score=32.25 Aligned_cols=29 Identities=24% Similarity=0.276 Sum_probs=24.7
Q ss_pred EEEEEeecCCCceEEEEecCCCCceeeeCCC
Q 010466 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPSSK 120 (510)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~ 120 (510)
-.+.|.|| +|.+.+++|||.+++-+..-+
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEELN 37 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEeccc
Confidence 46789999 699999999999999886543
No 71
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=41.51 E-value=24 Score=28.98 Aligned_cols=24 Identities=13% Similarity=0.209 Sum_probs=20.1
Q ss_pred ecCCCceEEEEecCCCCceeeeCCCC
Q 010466 96 IGTPPQNFTVIFDTGSSNLWVPSSKC 121 (510)
Q Consensus 96 iGtP~Q~~~v~lDTGSs~~Wv~~~~C 121 (510)
+| +|.+..++|||.+++-+...+.
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~l 50 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEEDW 50 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTTS
T ss_pred CC--CEEEEEEecCCCCcEEEecccC
Confidence 55 5888999999999999986555
No 72
>1htr_P Progastricsin (Pro segment); aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_P
Probab=34.62 E-value=22 Score=22.52 Aligned_cols=21 Identities=24% Similarity=0.115 Sum_probs=16.7
Q ss_pred eEEeeeeeccCchhhhhhhcc
Q 010466 30 LYRIGLKKRKFDLNNRVAARL 50 (510)
Q Consensus 30 ~~~ipl~~~~~~~~~~~~~~~ 50 (510)
++||||++.++.+..+.+.+.
T Consensus 2 l~RIpL~K~~s~R~~l~~~g~ 22 (43)
T 1htr_P 2 VVKVPLKKFKSIRETMKEKGL 22 (43)
T ss_dssp CEEEEEEECCCHHHHHHHTTC
T ss_pred eEEEeeeEcchHHHHHHHcCc
Confidence 689999999888877766553
No 73
>1tzs_P Activation peptide from cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=32.58 E-value=21 Score=21.39 Aligned_cols=21 Identities=19% Similarity=0.127 Sum_probs=15.8
Q ss_pred ceEEeeeeeccCchhhhhhhc
Q 010466 29 GLYRIGLKKRKFDLNNRVAAR 49 (510)
Q Consensus 29 ~~~~ipl~~~~~~~~~~~~~~ 49 (510)
+++||||++..+.+..+.+.+
T Consensus 2 ~l~rIpL~K~~s~r~~l~~~g 22 (35)
T 1tzs_P 2 SLHRVPLRRHPSLKKKLRARS 22 (35)
T ss_pred cEEEEEeEEchHHHHHHHHcc
Confidence 468999999887777665544
No 74
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=27.65 E-value=61 Score=30.98 Aligned_cols=41 Identities=17% Similarity=0.101 Sum_probs=29.0
Q ss_pred cceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHH
Q 010466 252 GEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTT 302 (510)
Q Consensus 252 g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~ 302 (510)
|.+...|+.....|.++ |.||.+. ..+++|||++.+++|..
T Consensus 3 ~~v~~~~~~~~~~Y~~~---i~iG~Q~-------~~v~~DTGSs~lWv~~~ 43 (325)
T 1ibq_A 3 GSAVTTPQNNDEEYLTP---VTVGKST-------LHLDFDTGSADLWVFSD 43 (325)
T ss_dssp EEEEEEECTTTSCEEEE---EEEBTEE-------EEEEEETTCCCEEEECT
T ss_pred ceEEeEEcCCCCEEEEE---EEECCEE-------EEEEEeCCCccceEeeC
Confidence 44556666666677654 6777433 45899999999999864
No 75
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=27.52 E-value=63 Score=30.85 Aligned_cols=41 Identities=27% Similarity=0.220 Sum_probs=29.3
Q ss_pred cceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHH
Q 010466 252 GEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTT 302 (510)
Q Consensus 252 g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~ 302 (510)
|.+...|+.....|.++ |.||.+. ..+++|||++.+++|..
T Consensus 4 g~v~~~~~~~~~~Y~~~---i~iG~Q~-------~~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 4 GVATNTPTANDEEYITP---VTIGGTT-------LNLNFDTGSADLWVFST 44 (323)
T ss_dssp EEEEEEECGGGSCEEEE---EEETTEE-------EEEEEETTCCCEEECBT
T ss_pred CceeeeecCCCCEEEEE---EEECCEE-------EEEEEeCCCcceEEecC
Confidence 45566676666677654 6778443 35899999999999864
No 76
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=25.12 E-value=23 Score=27.49 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=21.7
Q ss_pred ccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCH
Q 010466 262 KGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPT 301 (510)
Q Consensus 262 ~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~ 301 (510)
...|.+ .|.||. +.....++||||++.+++|.
T Consensus 12 ~~~Y~~---~i~iGT-----P~Q~~~v~~DTGSs~lWv~~ 43 (97)
T 1lya_A 12 DAQYYG---EIGIGT-----PPQCFTVVFDTGSSNLWVPS 43 (97)
T ss_dssp TTEEEE---EEEETT-----TTEEEEEEEETTCCCEEEEB
T ss_pred CCeEEE---EEEECC-----CCeEEEEEEeCCCCceEEeE
Confidence 345554 366763 22345689999999999985
No 77
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=25.02 E-value=75 Score=30.35 Aligned_cols=41 Identities=20% Similarity=0.163 Sum_probs=28.8
Q ss_pred cceeEEeccCccceEEEeceEEEcCeeeeecCCCeeEEEcCCCcCcccCHH
Q 010466 252 GEHTYVPVTQKGYWQFDMGDVMIDGQTTGFCAGGCAAIADSGTSLLAGPTT 302 (510)
Q Consensus 252 g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGtt~i~lP~~ 302 (510)
|.+...|+.....|.++ |.||.+. ..+++|||++.+++|..
T Consensus 4 ~~v~~~~~~~~~~Y~~~---i~iG~q~-------~~v~~DTGSs~lWv~~~ 44 (323)
T 1izd_A 4 GSVTTNPTSNDEEYITQ---VTVGDDT-------LGLDFDTGSADLWVFSS 44 (323)
T ss_dssp EEEEEEECGGGCCEEEE---EEETTEE-------EEEEEETTCCCEEECBT
T ss_pred CceeeeEcCCCCEEEEE---EEECCEE-------EEEEEcCCCcceEEecC
Confidence 45555666666667644 6777433 45899999999999864
No 78
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=22.03 E-value=90 Score=27.91 Aligned_cols=30 Identities=23% Similarity=0.251 Sum_probs=24.8
Q ss_pred EEEEEeecCCCceEEEEecCCCCceeeeCCCC
Q 010466 90 YFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKC 121 (510)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~~Wv~~~~C 121 (510)
=.+.+.|| +|.+..++|||.+++-+...+.
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~~~l 142 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEELNL 142 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSCCC
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeecccC
Confidence 46788998 5999999999999999865443
Done!