Query 010469
Match_columns 510
No_of_seqs 385 out of 3719
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 07:28:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010469.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010469hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f8u_A Protein disulfide-isome 100.0 1.7E-58 5.9E-63 473.8 43.2 394 94-501 2-419 (481)
2 2b5e_A Protein disulfide-isome 100.0 1E-56 3.4E-61 462.9 33.9 390 92-501 13-426 (504)
3 3us3_A Calsequestrin-1; calciu 100.0 2.2E-45 7.5E-50 361.3 34.8 326 88-423 7-355 (367)
4 2r2j_A Thioredoxin domain-cont 100.0 1.1E-45 3.9E-50 366.1 25.7 351 93-457 5-376 (382)
5 1sji_A Calsequestrin 2, calseq 100.0 5.6E-44 1.9E-48 350.1 35.1 316 93-420 11-350 (350)
6 3apo_A DNAJ homolog subfamily 100.0 3.3E-43 1.1E-47 380.9 35.5 374 91-501 114-610 (780)
7 3uem_A Protein disulfide-isome 100.0 2.3E-39 7.8E-44 319.4 30.0 297 197-499 13-314 (361)
8 3apo_A DNAJ homolog subfamily 100.0 2.7E-30 9.2E-35 279.8 33.3 371 94-503 336-724 (780)
9 3ed3_A Protein disulfide-isome 100.0 4.1E-30 1.4E-34 244.4 23.2 220 91-315 15-279 (298)
10 3ec3_A Protein disulfide-isome 100.0 4.2E-28 1.4E-32 225.2 19.8 228 198-436 3-248 (250)
11 2h8l_A Protein disulfide-isome 100.0 3.8E-28 1.3E-32 226.0 19.0 231 197-437 2-251 (252)
12 3idv_A Protein disulfide-isome 99.9 3.8E-26 1.3E-30 211.8 24.3 211 91-307 13-239 (241)
13 4f9z_D Endoplasmic reticulum r 99.9 8.1E-25 2.8E-29 200.2 20.6 212 201-418 9-227 (227)
14 3q6o_A Sulfhydryl oxidase 1; p 99.9 1.5E-21 5.2E-26 180.8 25.0 205 92-301 11-236 (244)
15 3zzx_A Thioredoxin; oxidoreduc 99.9 5.9E-21 2E-25 151.2 13.1 95 99-198 7-104 (105)
16 2dj1_A Protein disulfide-isome 99.9 1.6E-20 5.3E-25 158.2 15.8 116 90-205 14-129 (140)
17 3h79_A Thioredoxin-like protei 99.9 1.3E-20 4.5E-25 155.7 15.0 108 91-198 13-126 (127)
18 3t58_A Sulfhydryl oxidase 1; o 99.8 4E-19 1.4E-23 180.3 27.3 207 92-302 11-237 (519)
19 2av4_A Thioredoxin-like protei 99.8 4E-20 1.4E-24 152.6 12.2 102 95-199 23-138 (160)
20 2voc_A Thioredoxin; electron t 99.8 7.7E-20 2.6E-24 147.5 13.6 104 95-202 3-107 (112)
21 2qsi_A Putative hydrogenase ex 99.8 4.8E-20 1.7E-24 150.0 12.3 104 93-199 15-122 (137)
22 3gnj_A Thioredoxin domain prot 99.8 1E-19 3.5E-24 146.6 14.2 105 93-200 4-110 (111)
23 3tco_A Thioredoxin (TRXA-1); d 99.8 1.4E-19 4.9E-24 145.1 14.4 104 93-199 4-108 (109)
24 3uem_A Protein disulfide-isome 99.8 4.3E-17 1.5E-21 160.1 34.9 301 93-414 17-355 (361)
25 1x5e_A Thioredoxin domain cont 99.8 1.3E-19 4.4E-24 149.6 13.9 111 92-206 6-116 (126)
26 2qgv_A Hydrogenase-1 operon pr 99.8 3.3E-20 1.1E-24 151.6 9.2 107 94-203 18-128 (140)
27 3die_A Thioredoxin, TRX; elect 99.8 2.3E-19 8E-24 143.1 14.0 103 93-199 3-106 (106)
28 3uvt_A Thioredoxin domain-cont 99.8 1.9E-19 6.4E-24 145.0 13.5 105 93-198 5-110 (111)
29 2trx_A Thioredoxin; electron t 99.8 2.8E-19 9.7E-24 143.1 14.3 104 93-199 2-107 (108)
30 1x5d_A Protein disulfide-isome 99.8 3E-19 1E-23 148.9 14.6 110 91-200 5-117 (133)
31 1nsw_A Thioredoxin, TRX; therm 99.8 2.1E-19 7.2E-24 143.1 13.1 102 95-199 2-104 (105)
32 1mek_A Protein disulfide isome 99.8 4E-20 1.4E-24 151.2 8.8 111 92-202 6-119 (120)
33 2ppt_A Thioredoxin-2; thiredox 99.8 4.4E-19 1.5E-23 151.6 15.5 107 92-201 46-153 (155)
34 3hz4_A Thioredoxin; NYSGXRC, P 99.8 2.6E-19 8.9E-24 150.5 13.6 108 91-201 4-113 (140)
35 3qfa_C Thioredoxin; protein-pr 99.8 1.7E-19 5.8E-24 146.4 11.6 102 93-199 12-116 (116)
36 3apq_A DNAJ homolog subfamily 99.8 1.9E-19 6.6E-24 162.5 13.1 115 91-208 95-210 (210)
37 2yzu_A Thioredoxin; redox prot 99.8 4.3E-19 1.5E-23 142.2 13.7 105 94-201 2-107 (109)
38 2ywm_A Glutaredoxin-like prote 99.8 2.4E-18 8.3E-23 157.7 20.3 193 101-303 9-218 (229)
39 2l5l_A Thioredoxin; structural 99.8 5.4E-19 1.9E-23 147.8 14.5 109 91-202 7-128 (136)
40 1a8l_A Protein disulfide oxido 99.8 1.1E-18 3.9E-23 159.6 17.8 193 101-303 10-224 (226)
41 3p2a_A Thioredoxin 2, putative 99.8 5.8E-19 2E-23 150.0 14.7 107 92-201 37-144 (148)
42 3bj5_A Protein disulfide-isome 99.8 1.9E-19 6.7E-24 151.3 11.4 133 299-432 7-143 (147)
43 2i4a_A Thioredoxin; acidophIle 99.8 8.7E-19 3E-23 140.0 14.7 103 93-198 2-106 (107)
44 1w4v_A Thioredoxin, mitochondr 99.8 6.4E-19 2.2E-23 143.7 13.7 111 87-200 7-119 (119)
45 2o8v_B Thioredoxin 1; disulfid 99.8 5.4E-19 1.9E-23 146.0 13.1 104 93-199 22-127 (128)
46 3f3q_A Thioredoxin-1; His TAG, 99.8 7.8E-19 2.7E-23 140.7 13.4 100 95-199 9-109 (109)
47 1t00_A Thioredoxin, TRX; redox 99.8 1.1E-18 3.9E-23 140.6 14.5 105 93-200 5-111 (112)
48 3ga4_A Dolichyl-diphosphooligo 99.8 9.4E-19 3.2E-23 150.1 14.5 112 92-203 17-156 (178)
49 2e0q_A Thioredoxin; electron t 99.8 1.1E-18 3.8E-23 138.5 14.0 102 95-200 1-103 (104)
50 3hxs_A Thioredoxin, TRXP; elec 99.8 6.1E-19 2.1E-23 148.6 12.7 107 91-200 20-139 (141)
51 1thx_A Thioredoxin, thioredoxi 99.8 1.5E-18 5E-23 140.6 14.5 105 93-200 7-113 (115)
52 1dby_A Chloroplast thioredoxin 99.8 1.2E-18 4E-23 139.3 13.5 103 94-199 2-106 (107)
53 2dml_A Protein disulfide-isome 99.8 9.2E-19 3.2E-23 145.3 13.4 106 92-200 16-124 (130)
54 4euy_A Uncharacterized protein 99.8 1.8E-19 6.2E-24 143.5 8.3 97 99-199 7-104 (105)
55 2pu9_C TRX-F, thioredoxin F-ty 99.8 1.9E-18 6.4E-23 139.1 14.1 103 92-199 4-110 (111)
56 1gh2_A Thioredoxin-like protei 99.8 2.2E-18 7.6E-23 137.6 14.5 101 95-200 3-107 (107)
57 1r26_A Thioredoxin; redox-acti 99.8 1.9E-18 6.4E-23 142.0 13.7 101 95-200 21-123 (125)
58 1ep7_A Thioredoxin CH1, H-type 99.8 2E-18 7E-23 139.1 13.7 103 94-200 3-111 (112)
59 1fb6_A Thioredoxin M; electron 99.8 2.4E-18 8.3E-23 136.9 13.6 102 95-199 2-105 (105)
60 3aps_A DNAJ homolog subfamily 99.8 8.8E-19 3E-23 143.6 11.2 106 93-201 3-114 (122)
61 1syr_A Thioredoxin; SGPP, stru 99.8 2.2E-18 7.6E-23 138.9 13.1 103 92-199 8-111 (112)
62 3d6i_A Monothiol glutaredoxin- 99.8 3.1E-18 1.1E-22 138.0 13.3 102 95-199 2-108 (112)
63 1xwb_A Thioredoxin; dimerizati 99.8 5.4E-18 1.8E-22 135.1 14.2 101 95-199 2-106 (106)
64 3dxb_A Thioredoxin N-terminall 99.8 3.3E-18 1.1E-22 155.7 14.5 111 89-202 8-120 (222)
65 2i1u_A Thioredoxin, TRX, MPT46 99.8 2.8E-18 9.6E-23 140.4 12.7 108 90-200 9-118 (121)
66 3ul3_B Thioredoxin, thioredoxi 99.8 1.3E-18 4.3E-23 144.0 10.3 96 99-197 31-127 (128)
67 3qou_A Protein YBBN; thioredox 99.8 2.9E-18 1E-22 162.8 14.1 107 92-201 6-115 (287)
68 2djj_A PDI, protein disulfide- 99.8 1.2E-18 4.3E-23 142.5 9.7 108 91-201 5-118 (121)
69 3m9j_A Thioredoxin; oxidoreduc 99.8 5.8E-18 2E-22 134.7 13.3 96 99-199 7-105 (105)
70 2dj3_A Protein disulfide-isome 99.8 8.3E-19 2.8E-23 146.2 8.5 111 91-202 5-120 (133)
71 3gix_A Thioredoxin-like protei 99.8 3.4E-18 1.2E-22 144.9 12.4 99 98-199 9-120 (149)
72 1faa_A Thioredoxin F; electron 99.8 8.2E-18 2.8E-22 138.2 14.3 103 92-199 17-123 (124)
73 1xfl_A Thioredoxin H1; AT3G510 99.8 1.2E-17 4E-22 137.1 14.4 104 91-199 14-123 (124)
74 3idv_A Protein disulfide-isome 99.8 6.7E-18 2.3E-22 156.0 14.5 111 93-203 130-240 (241)
75 2vlu_A Thioredoxin, thioredoxi 99.8 1.1E-17 3.6E-22 137.1 13.8 103 93-200 13-120 (122)
76 2vim_A Thioredoxin, TRX; thior 99.8 1.3E-17 4.4E-22 132.3 13.7 99 96-199 2-104 (104)
77 1v98_A Thioredoxin; oxidoreduc 99.8 9.4E-18 3.2E-22 141.1 13.6 106 93-201 33-139 (140)
78 2xc2_A Thioredoxinn; oxidoredu 99.8 7.4E-18 2.5E-22 137.0 12.5 100 94-199 14-117 (117)
79 2l6c_A Thioredoxin; oxidoreduc 99.8 3.4E-18 1.2E-22 137.2 10.2 101 96-201 6-107 (110)
80 1oaz_A Thioredoxin 1; immune s 99.8 1.5E-18 5.2E-23 142.1 8.3 104 93-199 3-122 (123)
81 2oe3_A Thioredoxin-3; electron 99.7 7.8E-18 2.7E-22 135.9 12.0 94 99-197 19-113 (114)
82 1zma_A Bacterocin transport ac 99.7 2.7E-18 9.2E-23 139.8 9.0 101 93-196 12-117 (118)
83 3emx_A Thioredoxin; structural 99.7 3.6E-18 1.2E-22 142.5 9.8 104 92-202 15-128 (135)
84 2wz9_A Glutaredoxin-3; protein 99.7 1.4E-17 4.7E-22 142.2 13.6 105 93-202 12-120 (153)
85 2l57_A Uncharacterized protein 99.7 5.1E-18 1.8E-22 139.9 10.6 95 105-202 21-119 (126)
86 3evi_A Phosducin-like protein 99.7 1.4E-17 4.8E-22 134.2 12.1 98 93-197 3-111 (118)
87 2es7_A Q8ZP25_salty, putative 99.7 2.2E-18 7.4E-23 144.2 7.6 111 94-208 18-133 (142)
88 1qgv_A Spliceosomal protein U5 99.7 1.4E-17 4.7E-22 139.9 12.1 98 99-199 10-120 (142)
89 2j23_A Thioredoxin; immune pro 99.7 1.7E-17 5.7E-22 135.7 12.0 103 94-199 16-120 (121)
90 3d22_A TRXH4, thioredoxin H-ty 99.7 3.4E-17 1.2E-21 137.5 14.1 105 92-201 23-133 (139)
91 2dj0_A Thioredoxin-related tra 99.7 1.1E-18 3.7E-23 146.2 4.7 103 93-197 7-118 (137)
92 2vm1_A Thioredoxin, thioredoxi 99.7 5.2E-17 1.8E-21 132.1 13.6 104 93-201 6-115 (118)
93 2djk_A PDI, protein disulfide- 99.7 2.4E-17 8.2E-22 137.0 11.6 127 303-432 3-131 (133)
94 2f51_A Thioredoxin; electron t 99.7 5.5E-17 1.9E-21 131.9 12.5 103 94-201 4-114 (118)
95 1ti3_A Thioredoxin H, PTTRXH1; 99.7 4.4E-17 1.5E-21 131.4 11.7 102 93-199 4-111 (113)
96 1sji_A Calsequestrin 2, calseq 99.7 1.1E-15 3.7E-20 149.2 23.6 261 203-498 13-291 (350)
97 3f8u_A Protein disulfide-isome 99.7 9.1E-15 3.1E-19 149.2 31.2 307 93-420 110-465 (481)
98 2c0g_A ERP29 homolog, windbeut 99.7 1.2E-16 4.2E-21 145.5 15.4 108 90-202 13-134 (248)
99 3cxg_A Putative thioredoxin; m 99.7 5.7E-17 2E-21 134.7 10.2 104 91-200 18-129 (133)
100 2dbc_A PDCL2, unnamed protein 99.7 2E-16 7E-21 131.7 12.2 100 93-199 10-120 (135)
101 2kuc_A Putative disulphide-iso 99.7 1.5E-16 5.1E-21 131.8 11.2 104 96-202 9-123 (130)
102 3us3_A Calsequestrin-1; calciu 99.7 5.1E-15 1.7E-19 145.1 23.3 262 203-498 15-293 (367)
103 1a8l_A Protein disulfide oxido 99.7 3.1E-16 1.1E-20 143.3 12.9 105 95-199 118-225 (226)
104 2qc7_A ERP31, ERP28, endoplasm 99.7 6.4E-16 2.2E-20 140.3 14.7 102 93-199 5-118 (240)
105 1a0r_P Phosducin, MEKA, PP33; 99.7 2.3E-17 7.9E-22 150.2 4.5 130 62-198 83-224 (245)
106 3fk8_A Disulphide isomerase; A 99.7 4.9E-16 1.7E-20 129.2 11.5 91 106-199 25-132 (133)
107 2yj7_A LPBCA thioredoxin; oxid 99.5 6.6E-18 2.3E-22 134.4 0.0 101 95-198 3-105 (106)
108 2fwh_A Thiol:disulfide interch 99.7 3.5E-16 1.2E-20 130.2 9.8 98 99-200 18-128 (134)
109 1fo5_A Thioredoxin; disulfide 99.6 4.2E-16 1.4E-20 118.5 8.0 83 111-199 3-85 (85)
110 2hls_A Protein disulfide oxido 99.6 8E-15 2.7E-19 134.8 17.7 193 101-305 15-226 (243)
111 2trc_P Phosducin, MEKA, PP33; 99.6 3.6E-16 1.2E-20 140.6 8.2 130 62-198 70-211 (217)
112 1nho_A Probable thioredoxin; b 99.6 5.5E-16 1.9E-20 117.9 7.2 82 112-199 3-84 (85)
113 1wou_A Thioredoxin -related pr 99.6 1.1E-15 3.7E-20 125.2 9.2 100 94-197 6-122 (123)
114 3qcp_A QSOX from trypanosoma b 99.6 1.2E-16 4.1E-21 157.6 3.7 105 92-197 22-136 (470)
115 3iv4_A Putative oxidoreductase 99.6 3.4E-15 1.2E-19 116.3 10.9 96 95-195 8-111 (112)
116 2djk_A PDI, protein disulfide- 99.6 1.8E-15 6E-20 125.6 9.5 104 95-202 8-117 (133)
117 2b5e_A Protein disulfide-isome 99.6 3E-15 1E-19 153.6 13.4 115 87-203 352-470 (504)
118 1wmj_A Thioredoxin H-type; str 99.6 1.6E-16 5.6E-21 131.6 1.6 105 93-202 14-124 (130)
119 3f9u_A Putative exported cytoc 99.6 2.5E-15 8.7E-20 130.9 9.0 99 98-199 31-165 (172)
120 2ju5_A Thioredoxin disulfide i 99.6 1.4E-14 4.7E-19 123.5 11.8 94 103-200 40-152 (154)
121 2ywm_A Glutaredoxin-like prote 99.6 6.8E-15 2.3E-19 134.6 10.4 101 94-200 119-220 (229)
122 3kp8_A Vkorc1/thioredoxin doma 99.6 1.4E-15 4.7E-20 120.4 4.6 76 109-197 11-92 (106)
123 1lu4_A Soluble secreted antige 99.6 1.4E-14 4.8E-19 120.7 10.1 101 95-199 9-135 (136)
124 2hls_A Protein disulfide oxido 99.5 3.5E-14 1.2E-18 130.5 13.2 102 98-202 125-228 (243)
125 2b5x_A YKUV protein, TRXY; thi 99.5 4.5E-14 1.5E-18 119.4 12.9 103 96-201 15-146 (148)
126 4f9z_D Endoplasmic reticulum r 99.5 4.3E-13 1.5E-17 122.1 20.2 197 94-303 10-223 (227)
127 2lst_A Thioredoxin; structural 99.3 4.4E-16 1.5E-20 129.0 0.0 98 101-201 10-117 (130)
128 1zzo_A RV1677; thioredoxin fol 99.5 3.1E-14 1.1E-18 118.5 10.9 102 95-200 10-135 (136)
129 2h30_A Thioredoxin, peptide me 99.5 2.3E-14 8E-19 123.6 9.9 105 94-200 22-156 (164)
130 1sen_A Thioredoxin-like protei 99.5 6.1E-15 2.1E-19 127.1 5.3 96 101-199 37-147 (164)
131 3dml_A Putative uncharacterize 99.5 2.2E-14 7.7E-19 113.5 7.8 90 109-199 17-109 (116)
132 3raz_A Thioredoxin-related pro 99.5 8.7E-14 3E-18 118.3 11.5 92 109-202 23-142 (151)
133 3or5_A Thiol:disulfide interch 99.5 1.4E-13 4.7E-18 118.9 12.5 105 95-201 19-152 (165)
134 2f9s_A Thiol-disulfide oxidore 99.5 1.1E-13 3.7E-18 117.6 11.3 92 109-202 25-140 (151)
135 1z6n_A Hypothetical protein PA 99.5 5.2E-14 1.8E-18 120.8 9.2 94 98-196 41-139 (167)
136 3lor_A Thiol-disulfide isomera 99.5 2.6E-13 9E-18 116.4 13.3 102 98-201 18-156 (160)
137 1ilo_A Conserved hypothetical 99.5 8.8E-14 3E-18 103.3 8.4 74 113-195 2-76 (77)
138 3eyt_A Uncharacterized protein 99.5 3.4E-13 1.2E-17 115.5 12.4 91 109-201 27-153 (158)
139 2lja_A Putative thiol-disulfid 99.5 2.1E-13 7.1E-18 116.0 10.6 92 109-202 29-145 (152)
140 3erw_A Sporulation thiol-disul 99.5 3.9E-13 1.3E-17 113.2 11.4 85 109-195 33-144 (145)
141 2r2j_A Thioredoxin domain-cont 99.5 9E-12 3.1E-16 122.8 22.6 258 203-498 7-281 (382)
142 3hcz_A Possible thiol-disulfid 99.4 2.6E-13 9E-18 114.7 9.2 89 109-199 30-145 (148)
143 3ira_A Conserved protein; meth 99.4 2.4E-13 8.1E-18 116.6 8.8 80 98-180 27-118 (173)
144 3ph9_A Anterior gradient prote 99.4 1.3E-13 4.5E-18 115.8 6.8 98 101-199 35-144 (151)
145 2l5o_A Putative thioredoxin; s 99.4 5.8E-13 2E-17 113.3 10.8 102 98-201 16-142 (153)
146 4evm_A Thioredoxin family prot 99.4 4.2E-13 1.4E-17 111.7 9.6 87 109-198 21-137 (138)
147 2lrn_A Thiol:disulfide interch 99.4 6.2E-13 2.1E-17 113.1 10.6 87 109-200 28-141 (152)
148 3ewl_A Uncharacterized conserv 99.4 5.6E-13 1.9E-17 111.9 10.2 87 109-199 26-140 (142)
149 2lrt_A Uncharacterized protein 99.4 1.5E-12 5.1E-17 110.7 12.5 84 109-194 34-142 (152)
150 3gl3_A Putative thiol:disulfid 99.4 1.7E-12 5.9E-17 110.2 12.8 92 109-202 27-144 (152)
151 3ia1_A THIO-disulfide isomeras 99.4 5.6E-13 1.9E-17 113.6 9.8 87 111-202 31-146 (154)
152 3eur_A Uncharacterized protein 99.4 6.9E-13 2.4E-17 111.4 10.1 83 109-196 30-141 (142)
153 3lwa_A Secreted thiol-disulfid 99.4 1.3E-12 4.4E-17 114.9 12.2 90 108-199 57-180 (183)
154 3hdc_A Thioredoxin family prot 99.4 2E-12 6.9E-17 110.7 12.4 102 98-201 29-153 (158)
155 2av4_A Thioredoxin-like protei 99.4 2.4E-13 8.3E-18 112.2 6.2 70 436-509 23-94 (160)
156 3fkf_A Thiol-disulfide oxidore 99.4 8E-13 2.7E-17 111.7 9.5 88 109-200 32-146 (148)
157 3ha9_A Uncharacterized thiored 99.4 1.1E-12 3.7E-17 113.2 9.9 86 109-199 36-163 (165)
158 2fgx_A Putative thioredoxin; N 99.4 7.8E-13 2.7E-17 103.2 7.9 77 112-195 30-106 (107)
159 2b1k_A Thiol:disulfide interch 99.4 1.5E-12 5E-17 112.8 9.3 95 99-199 39-159 (168)
160 1i5g_A Tryparedoxin II; electr 99.4 1.6E-12 5.6E-17 109.3 9.1 86 95-181 13-124 (144)
161 3kh7_A Thiol:disulfide interch 99.4 2.4E-12 8.4E-17 112.2 10.2 91 103-199 51-166 (176)
162 3kcm_A Thioredoxin family prot 99.4 3.1E-12 1.1E-16 108.9 10.6 90 109-200 27-143 (154)
163 1kng_A Thiol:disulfide interch 99.4 1.7E-12 5.9E-17 110.8 8.7 86 109-199 41-151 (156)
164 1ttz_A Conserved hypothetical 99.3 1.1E-12 3.8E-17 98.9 6.2 74 114-199 3-76 (87)
165 3fw2_A Thiol-disulfide oxidore 99.3 6.8E-12 2.3E-16 106.3 11.8 87 109-199 32-147 (150)
166 2hyx_A Protein DIPZ; thioredox 99.3 4.4E-12 1.5E-16 122.0 11.8 89 109-199 81-198 (352)
167 1o8x_A Tryparedoxin, TRYX, TXN 99.3 2.7E-12 9.2E-17 108.3 9.2 71 109-180 27-123 (146)
168 3s9f_A Tryparedoxin; thioredox 99.3 3.2E-12 1.1E-16 110.2 9.6 72 109-181 47-144 (165)
169 3h79_A Thioredoxin-like protei 99.3 1.5E-12 5E-17 107.1 6.2 71 433-503 14-87 (127)
170 1jfu_A Thiol:disulfide interch 99.3 9.9E-12 3.4E-16 109.5 11.7 92 109-202 59-182 (186)
171 1o73_A Tryparedoxin; electron 99.3 3.3E-12 1.1E-16 107.4 8.1 73 109-182 27-125 (144)
172 2djj_A PDI, protein disulfide- 99.3 5.8E-12 2E-16 102.4 8.1 72 429-500 2-76 (121)
173 2ywi_A Hypothetical conserved 99.3 1E-11 3.6E-16 110.3 10.3 91 109-201 44-175 (196)
174 2dj3_A Protein disulfide-isome 99.3 5.3E-12 1.8E-16 104.6 7.4 75 432-508 5-79 (133)
175 4fo5_A Thioredoxin-like protei 99.3 8.9E-12 3E-16 104.7 8.7 84 109-196 31-141 (143)
176 2cvb_A Probable thiol-disulfid 99.3 1.8E-11 6.1E-16 108.0 10.4 90 109-201 32-160 (188)
177 2lus_A Thioredoxion; CR-Trp16, 98.9 4.7E-13 1.6E-17 112.4 0.0 92 96-187 10-129 (143)
178 3zzx_A Thioredoxin; oxidoreduc 99.3 3.1E-12 1E-16 100.9 4.2 64 440-508 7-71 (105)
179 2qsi_A Putative hydrogenase ex 99.2 2.4E-12 8.2E-17 104.7 3.5 72 434-509 15-88 (137)
180 3evi_A Phosducin-like protein 99.2 5.5E-12 1.9E-16 101.3 5.3 61 434-497 3-65 (118)
181 2h8l_A Protein disulfide-isome 99.2 7.2E-10 2.5E-14 102.4 20.1 197 93-304 6-229 (252)
182 2rli_A SCO2 protein homolog, m 99.2 4.1E-11 1.4E-15 103.9 10.8 92 109-200 25-164 (171)
183 3u5r_E Uncharacterized protein 99.2 3E-11 1E-15 109.1 10.2 103 96-201 44-188 (218)
184 3cmi_A Peroxiredoxin HYR1; thi 99.2 1.9E-11 6.4E-16 106.1 8.4 89 109-200 31-168 (171)
185 2trx_A Thioredoxin; electron t 99.2 1.8E-11 6.3E-16 97.2 7.2 68 434-503 2-69 (108)
186 2ggt_A SCO1 protein homolog, m 99.2 6.7E-11 2.3E-15 101.7 10.8 92 109-200 22-161 (164)
187 3dwv_A Glutathione peroxidase- 99.2 4.9E-11 1.7E-15 105.0 10.1 104 96-201 32-184 (187)
188 2vup_A Glutathione peroxidase- 99.2 5.7E-11 2E-15 104.9 10.4 90 109-200 47-185 (190)
189 3ec3_A Protein disulfide-isome 99.2 2.4E-09 8.1E-14 98.8 21.5 199 92-304 5-227 (250)
190 2o8v_B Thioredoxin 1; disulfid 99.2 4E-11 1.4E-15 98.4 8.5 69 433-503 21-89 (128)
191 1un2_A DSBA, thiol-disulfide i 99.2 4E-12 1.4E-16 112.3 2.5 114 371-498 42-160 (197)
192 3ed3_A Protein disulfide-isome 99.2 1.5E-09 5.2E-14 102.6 20.2 204 202-416 18-267 (298)
193 1a0r_P Phosducin, MEKA, PP33; 99.2 3E-12 1E-16 116.4 1.3 85 408-496 87-174 (245)
194 3drn_A Peroxiredoxin, bacterio 99.2 1.3E-10 4.3E-15 99.7 11.4 76 109-186 27-131 (161)
195 2p5q_A Glutathione peroxidase 99.2 5.2E-11 1.8E-15 103.1 9.1 90 109-200 31-168 (170)
196 3ga4_A Dolichyl-diphosphooligo 99.2 2E-11 6.9E-16 104.5 6.0 75 433-509 17-102 (178)
197 2f8a_A Glutathione peroxidase 99.2 5.4E-11 1.8E-15 106.4 9.0 89 109-199 46-206 (208)
198 2ls5_A Uncharacterized protein 98.8 2.3E-12 7.7E-17 110.5 0.0 100 97-199 20-147 (159)
199 2v1m_A Glutathione peroxidase; 99.2 8E-11 2.7E-15 101.8 9.7 89 109-199 30-166 (169)
200 3gnj_A Thioredoxin domain prot 99.2 1.7E-11 5.8E-16 97.9 5.0 68 434-503 4-71 (111)
201 2k6v_A Putative cytochrome C o 99.2 3.5E-11 1.2E-15 104.4 7.2 90 109-198 34-171 (172)
202 2trc_P Phosducin, MEKA, PP33; 99.2 2.9E-12 9.8E-17 115.1 0.2 86 406-495 72-160 (217)
203 1x5d_A Protein disulfide-isome 99.2 2.5E-11 8.5E-16 100.4 5.9 71 433-503 6-78 (133)
204 2p31_A CL683, glutathione pero 99.2 5.3E-11 1.8E-15 104.2 8.3 89 109-199 48-180 (181)
205 2i4a_A Thioredoxin; acidophIle 99.2 4.6E-11 1.6E-15 94.6 6.9 67 434-502 2-68 (107)
206 2dml_A Protein disulfide-isome 99.2 2.3E-11 7.9E-16 100.2 5.2 68 433-502 16-83 (130)
207 3kp9_A Vkorc1/thioredoxin doma 99.2 1E-11 3.4E-16 115.2 3.3 82 102-198 191-278 (291)
208 3dxb_A Thioredoxin N-terminall 99.2 5.8E-11 2E-15 107.6 8.2 73 429-503 7-79 (222)
209 1t00_A Thioredoxin, TRX; redox 99.1 4.2E-11 1.4E-15 95.8 6.3 68 433-502 4-71 (112)
210 1qgv_A Spliceosomal protein U5 99.1 4.9E-11 1.7E-15 99.8 6.7 65 440-508 10-75 (142)
211 2pu9_C TRX-F, thioredoxin F-ty 99.1 5.2E-11 1.8E-15 95.1 6.6 61 432-495 3-64 (111)
212 3aps_A DNAJ homolog subfamily 99.1 2.7E-11 9.1E-16 98.6 4.9 67 434-502 3-69 (122)
213 3hz4_A Thioredoxin; NYSGXRC, P 99.1 3.7E-11 1.3E-15 100.4 5.2 69 433-503 5-73 (140)
214 1w4v_A Thioredoxin, mitochondr 99.1 2.7E-11 9.4E-16 98.1 4.2 71 430-502 9-79 (119)
215 2voc_A Thioredoxin; electron t 99.1 6.5E-11 2.2E-15 94.7 6.3 64 436-503 3-66 (112)
216 3kij_A Probable glutathione pe 99.1 1.1E-10 3.9E-15 102.0 8.2 103 95-199 23-169 (180)
217 2l4c_A Endoplasmic reticulum r 99.1 2E-10 6.8E-15 92.8 8.6 104 197-305 15-124 (124)
218 3gix_A Thioredoxin-like protei 99.1 3.8E-11 1.3E-15 101.3 4.5 63 439-503 9-72 (149)
219 2qgv_A Hydrogenase-1 operon pr 99.1 6.6E-12 2.3E-16 102.5 -0.4 70 435-509 18-90 (140)
220 3hxs_A Thioredoxin, TRXP; elec 99.1 4E-11 1.4E-15 100.4 4.3 69 433-503 21-100 (141)
221 2dj0_A Thioredoxin-related tra 99.1 3.6E-11 1.2E-15 100.1 4.0 70 433-503 6-76 (137)
222 1dby_A Chloroplast thioredoxin 99.1 5.6E-11 1.9E-15 94.1 5.0 65 436-502 3-67 (107)
223 1thx_A Thioredoxin, thioredoxi 99.1 8.2E-11 2.8E-15 94.5 5.7 68 433-502 6-73 (115)
224 2obi_A PHGPX, GPX-4, phospholi 99.1 1.7E-10 5.8E-15 101.2 8.1 88 109-198 46-182 (183)
225 2gs3_A PHGPX, GPX-4, phospholi 99.1 1.8E-10 6.3E-15 101.1 8.3 88 109-198 48-184 (185)
226 1we0_A Alkyl hydroperoxide red 99.1 2E-10 6.8E-15 101.1 8.6 89 109-199 30-156 (187)
227 2l5l_A Thioredoxin; structural 99.1 8.6E-11 2.9E-15 97.6 5.9 69 432-502 7-86 (136)
228 3q6o_A Sulfhydryl oxidase 1; p 99.1 8.4E-11 2.9E-15 108.3 6.3 76 433-508 11-87 (244)
229 1fb6_A Thioredoxin M; electron 99.1 9E-11 3.1E-15 92.5 5.6 63 436-500 2-64 (105)
230 2e7p_A Glutaredoxin; thioredox 99.1 4.9E-11 1.7E-15 96.1 4.1 86 102-198 12-106 (116)
231 2i1u_A Thioredoxin, TRX, MPT46 99.1 9.3E-11 3.2E-15 95.2 5.8 69 432-502 10-78 (121)
232 3die_A Thioredoxin, TRX; elect 99.1 9.5E-11 3.2E-15 92.6 5.7 65 435-503 4-68 (106)
233 2dlx_A UBX domain-containing p 99.1 7.9E-10 2.7E-14 92.8 11.2 94 102-199 30-135 (153)
234 2dj1_A Protein disulfide-isome 99.1 6.7E-11 2.3E-15 98.8 4.6 70 432-502 15-85 (140)
235 1nsw_A Thioredoxin, TRX; therm 99.1 1.2E-10 3.9E-15 92.0 5.8 64 436-502 2-65 (105)
236 1zof_A Alkyl hydroperoxide-red 99.1 3.1E-10 1E-14 100.9 9.2 89 109-199 32-160 (198)
237 4euy_A Uncharacterized protein 99.1 9.9E-11 3.4E-15 92.4 5.2 63 440-508 7-69 (105)
238 2ppt_A Thioredoxin-2; thiredox 99.1 9E-11 3.1E-15 99.8 5.3 68 433-503 46-113 (155)
239 3uvt_A Thioredoxin domain-cont 99.1 1.1E-10 3.6E-15 93.2 5.4 69 433-503 4-73 (111)
240 2k8s_A Thioredoxin; dimer, str 99.1 8E-11 2.7E-15 87.8 4.3 61 114-179 4-65 (80)
241 1xvw_A Hypothetical protein RV 99.1 3E-10 1E-14 97.2 8.6 87 109-197 34-157 (160)
242 3qou_A Protein YBBN; thioredox 99.1 8E-11 2.7E-15 111.3 5.4 69 433-503 6-75 (287)
243 1wjk_A C330018D20RIK protein; 99.1 2.7E-10 9.1E-15 88.7 7.4 80 110-200 15-96 (100)
244 2bmx_A Alkyl hydroperoxidase C 99.1 4.3E-10 1.5E-14 99.7 9.8 90 109-200 44-170 (195)
245 3qfa_C Thioredoxin; protein-pr 99.1 4.1E-11 1.4E-15 96.5 2.8 68 433-503 11-79 (116)
246 3tco_A Thioredoxin (TRXA-1); d 99.1 1.3E-10 4.4E-15 92.3 5.7 67 433-502 3-69 (109)
247 3p2a_A Thioredoxin 2, putative 99.0 1.7E-10 5.9E-15 97.3 5.9 68 433-503 37-104 (148)
248 2yzu_A Thioredoxin; redox prot 99.0 1.9E-10 6.6E-15 91.2 5.3 64 435-501 2-65 (109)
249 1oaz_A Thioredoxin 1; immune s 99.0 1.2E-10 4.3E-15 94.7 4.0 71 434-508 3-87 (123)
250 1gh2_A Thioredoxin-like protei 99.0 2.3E-10 8E-15 90.6 5.5 63 436-501 3-67 (107)
251 3d6i_A Monothiol glutaredoxin- 99.0 1.5E-10 5.2E-15 92.5 4.4 66 436-502 2-70 (112)
252 2dbc_A PDCL2, unnamed protein 99.0 2.6E-10 8.8E-15 94.5 5.9 63 433-498 9-73 (135)
253 1faa_A Thioredoxin F; electron 99.0 2.9E-10 1E-14 92.7 6.1 60 433-495 17-77 (124)
254 2b7k_A SCO1 protein; metalloch 99.0 8.8E-10 3E-14 98.0 9.6 92 109-200 40-179 (200)
255 2i3y_A Epididymal secretory gl 99.0 2.5E-09 8.5E-14 95.7 12.5 103 95-200 40-211 (215)
256 2f51_A Thioredoxin; electron t 99.0 2.2E-10 7.4E-15 92.6 4.8 64 435-501 4-69 (118)
257 1x5e_A Thioredoxin domain cont 99.0 2.3E-10 7.9E-15 93.6 5.1 67 433-503 6-72 (126)
258 1r26_A Thioredoxin; redox-acti 99.0 2.3E-10 7.8E-15 93.4 4.8 64 435-502 20-84 (125)
259 1qmv_A Human thioredoxin perox 99.0 1.9E-09 6.3E-14 95.7 10.7 89 109-199 33-162 (197)
260 3f3q_A Thioredoxin-1; His TAG, 99.0 2.3E-10 7.8E-15 91.0 3.9 66 434-503 7-72 (109)
261 1hyu_A AHPF, alkyl hydroperoxi 99.0 2.3E-09 7.9E-14 109.9 12.1 96 96-198 102-198 (521)
262 1xwb_A Thioredoxin; dimerizati 99.0 4.6E-10 1.6E-14 88.5 5.3 64 436-501 2-67 (106)
263 1mek_A Protein disulfide isome 99.0 3.8E-10 1.3E-14 91.3 4.8 70 433-503 6-76 (120)
264 1ep7_A Thioredoxin CH1, H-type 99.0 4.1E-10 1.4E-14 89.9 4.8 67 434-502 2-72 (112)
265 1xzo_A BSSCO, hypothetical pro 99.0 2.1E-09 7.1E-14 93.2 9.7 92 109-200 32-172 (174)
266 2e0q_A Thioredoxin; electron t 99.0 4.5E-10 1.5E-14 88.2 4.8 62 436-501 1-62 (104)
267 1zye_A Thioredoxin-dependent p 99.0 1.4E-09 4.7E-14 98.2 8.4 89 109-199 55-184 (220)
268 1ego_A Glutaredoxin; electron 98.9 2.1E-09 7.2E-14 81.0 8.0 75 114-199 3-83 (85)
269 1uul_A Tryparedoxin peroxidase 98.9 2.7E-09 9.2E-14 95.1 9.9 89 109-199 35-164 (202)
270 2i81_A 2-Cys peroxiredoxin; st 98.9 3.4E-09 1.2E-13 95.0 10.5 89 109-199 51-179 (213)
271 2vlu_A Thioredoxin, thioredoxi 98.9 4.9E-10 1.7E-14 91.0 4.5 67 433-502 12-81 (122)
272 2jsy_A Probable thiol peroxida 98.9 6.1E-09 2.1E-13 89.6 11.7 99 97-199 31-166 (167)
273 1xfl_A Thioredoxin H1; AT3G510 98.9 7.9E-10 2.7E-14 90.1 5.7 67 433-502 15-85 (124)
274 1v98_A Thioredoxin; oxidoreduc 98.9 5.3E-10 1.8E-14 93.3 4.6 65 434-501 33-97 (140)
275 2h01_A 2-Cys peroxiredoxin; th 98.9 2.7E-09 9.1E-14 94.3 9.2 89 109-199 30-158 (192)
276 2xc2_A Thioredoxinn; oxidoredu 98.9 5.5E-10 1.9E-14 90.0 4.2 64 435-502 14-79 (117)
277 2r37_A Glutathione peroxidase 98.9 4.2E-09 1.4E-13 93.7 10.1 88 109-199 37-192 (207)
278 2oe3_A Thioredoxin-3; electron 98.9 4.1E-10 1.4E-14 90.3 3.0 66 434-502 12-77 (114)
279 3apq_A DNAJ homolog subfamily 98.9 6.4E-10 2.2E-14 99.8 4.5 67 433-502 96-162 (210)
280 3gkn_A Bacterioferritin comigr 98.9 5E-09 1.7E-13 89.8 9.7 88 109-198 34-160 (163)
281 3ul3_B Thioredoxin, thioredoxi 98.9 5.3E-10 1.8E-14 91.7 3.4 59 443-503 33-91 (128)
282 3t58_A Sulfhydryl oxidase 1; o 98.9 1.1E-09 3.6E-14 111.2 5.8 76 433-508 11-87 (519)
283 3ztl_A Thioredoxin peroxidase; 98.9 8.8E-09 3E-13 93.1 11.3 87 109-197 68-195 (222)
284 1syr_A Thioredoxin; SGPP, stru 98.9 9E-10 3.1E-14 87.9 4.2 65 433-501 8-72 (112)
285 2vim_A Thioredoxin, TRX; thior 98.9 1.1E-09 3.9E-14 85.9 4.7 62 437-501 2-65 (104)
286 3d22_A TRXH4, thioredoxin H-ty 98.9 1.4E-09 4.9E-14 90.5 5.5 68 433-503 23-94 (139)
287 2wz9_A Glutaredoxin-3; protein 98.9 1.2E-09 4.2E-14 92.5 5.1 67 433-502 11-79 (153)
288 1nm3_A Protein HI0572; hybrid, 98.9 5.9E-08 2E-12 88.9 16.5 143 109-274 32-224 (241)
289 2yj7_A LPBCA thioredoxin; oxid 98.4 2.3E-10 7.8E-15 90.2 0.0 69 436-508 3-71 (106)
290 1ti3_A Thioredoxin H, PTTRXH1; 98.9 1.7E-09 5.9E-14 86.3 5.2 66 433-501 3-72 (113)
291 3qcp_A QSOX from trypanosoma b 98.9 1.7E-09 5.7E-14 106.9 5.4 71 433-503 22-99 (470)
292 1eej_A Thiol:disulfide interch 98.8 5.6E-09 1.9E-13 93.9 8.3 82 109-199 85-210 (216)
293 3gyk_A 27KDA outer membrane pr 98.8 1.3E-08 4.6E-13 88.2 10.3 83 109-199 21-172 (175)
294 3cxg_A Putative thioredoxin; m 98.8 8.8E-10 3E-14 91.0 2.5 67 433-503 19-87 (133)
295 1xvq_A Thiol peroxidase; thior 98.8 7.5E-09 2.6E-13 89.8 8.5 70 109-183 43-146 (175)
296 1wou_A Thioredoxin -related pr 98.8 2.5E-09 8.7E-14 86.9 5.1 58 436-495 7-72 (123)
297 3emx_A Thioredoxin; structural 98.8 3.2E-10 1.1E-14 94.0 -0.4 56 433-495 15-70 (135)
298 2c0d_A Thioredoxin peroxidase 98.8 1.4E-08 4.8E-13 91.4 10.2 89 109-199 55-183 (221)
299 4g2e_A Peroxiredoxin; redox pr 98.8 3E-09 1E-13 90.5 5.4 87 109-197 29-155 (157)
300 2vm1_A Thioredoxin, thioredoxi 98.8 2.3E-09 7.9E-14 86.3 4.2 66 433-501 5-74 (118)
301 3ixr_A Bacterioferritin comigr 98.8 2.5E-08 8.5E-13 86.8 10.9 102 95-198 36-176 (179)
302 3me7_A Putative uncharacterize 98.8 2.1E-08 7.2E-13 86.5 10.2 94 109-202 27-164 (170)
303 2a4v_A Peroxiredoxin DOT5; yea 98.8 2.2E-08 7.5E-13 85.4 10.2 81 105-188 30-139 (159)
304 3m9j_A Thioredoxin; oxidoreduc 98.8 3.6E-09 1.2E-13 83.2 4.6 60 440-502 7-67 (105)
305 2j23_A Thioredoxin; immune pro 98.8 1.8E-09 6E-14 87.6 2.7 68 433-502 14-82 (121)
306 1n8j_A AHPC, alkyl hydroperoxi 98.8 4.6E-08 1.6E-12 85.7 11.8 89 109-199 29-155 (186)
307 2l57_A Uncharacterized protein 98.8 1.8E-09 6.2E-14 88.2 2.1 49 449-499 23-73 (126)
308 2l6c_A Thioredoxin; oxidoreduc 98.8 1.8E-09 6.2E-14 85.8 1.7 61 437-502 6-66 (110)
309 2pn8_A Peroxiredoxin-4; thiore 98.7 5.2E-08 1.8E-12 87.1 10.9 89 109-199 47-176 (211)
310 1t3b_A Thiol:disulfide interch 98.7 2.6E-08 8.9E-13 89.1 8.3 82 109-197 85-208 (211)
311 3iv4_A Putative oxidoreductase 98.7 2.6E-09 8.8E-14 83.1 1.1 61 434-499 6-67 (112)
312 1fo5_A Thioredoxin; disulfide 98.7 1.3E-08 4.6E-13 76.4 5.1 49 453-503 3-51 (85)
313 3qpm_A Peroxiredoxin; oxidored 98.7 4.1E-08 1.4E-12 89.6 9.2 88 109-198 76-204 (240)
314 4gqc_A Thiol peroxidase, perox 98.7 1E-08 3.4E-13 87.9 4.4 95 103-199 26-159 (164)
315 3uma_A Hypothetical peroxiredo 98.7 5.8E-08 2E-12 84.6 9.0 74 109-184 55-166 (184)
316 1zma_A Bacterocin transport ac 98.7 2E-08 6.8E-13 80.8 5.1 57 435-496 13-69 (118)
317 3a2v_A Probable peroxiredoxin; 98.7 8.4E-08 2.9E-12 87.4 9.8 94 104-199 27-161 (249)
318 2l4c_A Endoplasmic reticulum r 98.7 3.5E-07 1.2E-11 73.6 12.3 93 95-198 23-122 (124)
319 1tp9_A Peroxiredoxin, PRX D (t 98.6 1.1E-07 3.7E-12 81.2 9.9 75 109-185 34-146 (162)
320 1psq_A Probable thiol peroxida 98.6 1.4E-07 4.9E-12 80.6 10.6 85 109-197 41-162 (163)
321 2wfc_A Peroxiredoxin 5, PRDX5; 98.6 1.1E-07 3.6E-12 81.7 9.7 69 109-179 30-135 (167)
322 1wmj_A Thioredoxin H-type; str 98.6 4.2E-09 1.4E-13 86.5 0.6 68 433-503 13-84 (130)
323 4hde_A SCO1/SENC family lipopr 98.6 2.7E-07 9.4E-12 79.4 11.9 60 95-154 17-77 (170)
324 2kuc_A Putative disulphide-iso 98.6 6.9E-09 2.4E-13 85.1 1.6 57 439-497 11-73 (130)
325 3fk8_A Disulphide isomerase; A 98.6 1E-08 3.5E-13 84.5 2.5 52 442-495 16-72 (133)
326 1nho_A Probable thioredoxin; b 98.6 1.5E-08 5.1E-13 76.1 3.1 51 454-508 3-53 (85)
327 2c0g_A ERP29 homolog, windbeut 98.6 2.1E-08 7.1E-13 91.2 4.4 59 433-496 15-76 (248)
328 2pwj_A Mitochondrial peroxired 98.6 1.1E-07 3.7E-12 82.0 8.7 48 105-154 39-88 (171)
329 1h75_A Glutaredoxin-like prote 98.6 3.8E-08 1.3E-12 73.2 5.0 70 114-197 3-75 (81)
330 2fwh_A Thiol:disulfide interch 98.6 1.4E-08 4.6E-13 83.9 2.6 55 440-497 18-76 (134)
331 1r7h_A NRDH-redoxin; thioredox 98.6 1.7E-07 5.7E-12 68.4 8.1 68 114-195 3-73 (75)
332 3tjj_A Peroxiredoxin-4; thiore 98.6 6.9E-08 2.3E-12 88.7 7.0 87 109-197 90-217 (254)
333 2es7_A Q8ZP25_salty, putative 98.6 5.7E-09 2E-13 86.8 -0.3 68 435-508 18-89 (142)
334 3f9u_A Putative exported cytoc 98.6 3.8E-08 1.3E-12 85.1 4.9 61 437-499 29-95 (172)
335 1z6n_A Hypothetical protein PA 98.6 1.8E-08 6E-13 86.2 2.6 46 451-499 53-98 (167)
336 1v58_A Thiol:disulfide interch 98.6 2.3E-07 7.9E-12 84.7 10.2 85 110-199 97-232 (241)
337 2lst_A Thioredoxin; structural 98.0 7.8E-09 2.7E-13 84.9 0.0 58 450-509 17-77 (130)
338 2yzh_A Probable thiol peroxida 98.6 9.9E-08 3.4E-12 82.3 6.9 85 109-198 46-170 (171)
339 1jfu_A Thiol:disulfide interch 98.5 2.5E-07 8.6E-12 81.0 8.9 92 404-497 13-104 (186)
340 3dml_A Putative uncharacterize 98.5 1.1E-08 3.9E-13 80.7 0.1 59 451-509 17-75 (116)
341 3mng_A Peroxiredoxin-5, mitoch 98.5 2.8E-07 9.7E-12 79.3 8.6 74 109-184 42-155 (173)
342 3h93_A Thiol:disulfide interch 98.5 3E-07 1E-11 80.9 9.0 86 109-199 24-183 (192)
343 1q98_A Thiol peroxidase, TPX; 98.5 2.8E-07 9.6E-12 78.9 8.4 72 109-184 42-148 (165)
344 3p7x_A Probable thiol peroxida 98.5 2.6E-07 8.9E-12 79.2 7.9 84 109-197 45-165 (166)
345 3hd5_A Thiol:disulfide interch 98.4 7.1E-07 2.4E-11 78.7 9.7 43 109-154 24-66 (195)
346 2qc7_A ERP31, ERP28, endoplasm 98.4 1.6E-07 5.6E-12 85.0 5.5 58 434-496 5-64 (240)
347 3kp8_A Vkorc1/thioredoxin doma 98.4 2.6E-08 8.9E-13 78.2 -0.6 31 452-482 12-42 (106)
348 1sen_A Thioredoxin-like protei 98.4 3E-08 1E-12 84.9 -0.4 48 450-499 44-91 (164)
349 1hyu_A AHPF, alkyl hydroperoxi 98.4 8.7E-07 3E-11 90.7 10.3 145 325-503 20-165 (521)
350 1prx_A HORF6; peroxiredoxin, h 98.4 3.2E-06 1.1E-10 76.1 12.7 86 112-199 34-168 (224)
351 3zrd_A Thiol peroxidase; oxido 98.4 1.1E-06 3.6E-11 77.8 9.3 67 109-179 77-177 (200)
352 1kte_A Thioltransferase; redox 98.4 8.7E-07 3E-11 69.4 7.2 68 102-179 4-78 (105)
353 3s9f_A Tryparedoxin; thioredox 98.4 7.2E-07 2.5E-11 76.3 7.3 47 451-497 47-93 (165)
354 3eur_A Uncharacterized protein 98.3 6E-07 2.1E-11 74.6 6.4 45 452-497 31-78 (142)
355 1i5g_A Tryparedoxin II; electr 98.3 8.4E-07 2.9E-11 73.9 7.2 47 451-497 27-73 (144)
356 3ira_A Conserved protein; meth 98.3 2.6E-07 8.8E-12 79.0 3.9 57 442-501 30-89 (173)
357 1xcc_A 1-Cys peroxiredoxin; un 98.3 1.9E-06 6.6E-11 77.3 9.8 86 112-199 34-165 (220)
358 1o8x_A Tryparedoxin, TRYX, TXN 98.3 9.3E-07 3.2E-11 73.9 7.2 47 451-497 27-73 (146)
359 1ilo_A Conserved hypothetical 98.3 2.4E-07 8.4E-12 67.9 3.1 37 455-493 2-38 (77)
360 3raz_A Thioredoxin-related pro 98.3 7.7E-07 2.6E-11 74.9 6.5 45 451-496 23-67 (151)
361 1o73_A Tryparedoxin; electron 98.3 1.2E-06 4E-11 73.0 7.2 47 451-497 27-73 (144)
362 4fo5_A Thioredoxin-like protei 98.3 9E-07 3.1E-11 73.7 6.4 46 451-497 31-76 (143)
363 2v2g_A Peroxiredoxin 6; oxidor 98.3 4.2E-06 1.4E-10 75.6 10.9 89 109-199 28-164 (233)
364 3fkf_A Thiol-disulfide oxidore 98.3 3.8E-07 1.3E-11 76.3 3.3 47 451-498 32-79 (148)
365 3hz8_A Thiol:disulfide interch 98.3 5E-06 1.7E-10 73.0 10.6 42 109-153 23-64 (193)
366 3or5_A Thiol:disulfide interch 98.3 1.4E-06 4.7E-11 74.4 6.7 59 437-497 20-78 (165)
367 2b5x_A YKUV protein, TRXY; thi 98.2 2.4E-06 8.1E-11 71.3 8.0 57 437-496 15-71 (148)
368 2h30_A Thioredoxin, peptide me 98.2 1.2E-06 4.2E-11 74.6 6.2 59 435-495 22-80 (164)
369 2fgx_A Putative thioredoxin; N 98.2 3.4E-07 1.2E-11 71.2 2.2 50 454-509 30-79 (107)
370 1zzo_A RV1677; thioredoxin fol 98.2 1.5E-06 5.1E-11 71.3 6.2 55 438-496 12-66 (136)
371 1lu4_A Soluble secreted antige 98.2 1.4E-06 4.9E-11 71.5 5.9 43 451-496 23-65 (136)
372 2ju5_A Thioredoxin disulfide i 98.2 9E-07 3.1E-11 74.8 4.7 55 442-498 34-95 (154)
373 2ht9_A Glutaredoxin-2; thiored 98.2 2.5E-06 8.6E-11 70.9 7.3 67 100-179 39-112 (146)
374 2hze_A Glutaredoxin-1; thiored 98.2 1.3E-06 4.4E-11 69.6 5.3 56 113-179 20-85 (114)
375 2cq9_A GLRX2 protein, glutared 98.2 2.4E-06 8.1E-11 69.7 6.9 67 100-179 17-90 (130)
376 3ic4_A Glutaredoxin (GRX-1); s 98.2 2.8E-06 9.7E-11 64.6 6.8 71 114-196 14-91 (92)
377 2lrn_A Thiol:disulfide interch 98.2 2.4E-06 8.2E-11 71.9 7.0 46 451-497 28-73 (152)
378 3ph9_A Anterior gradient prote 98.2 1.3E-06 4.5E-11 73.0 5.2 50 442-493 31-86 (151)
379 2lrt_A Uncharacterized protein 98.2 1.8E-06 6.2E-11 72.7 6.1 47 451-498 34-80 (152)
380 3ewl_A Uncharacterized conserv 98.2 1.4E-06 4.6E-11 72.4 5.3 46 451-497 26-74 (142)
381 1ttz_A Conserved hypothetical 98.2 3E-07 1E-11 69.0 1.0 45 456-509 3-47 (87)
382 2znm_A Thiol:disulfide interch 98.1 6.1E-06 2.1E-10 72.6 8.7 42 109-153 21-62 (195)
383 3hcz_A Possible thiol-disulfid 98.1 1.7E-06 5.7E-11 72.3 4.7 47 451-498 30-76 (148)
384 3erw_A Sporulation thiol-disul 98.1 3.2E-06 1.1E-10 70.2 6.4 45 451-496 33-77 (145)
385 3eyt_A Uncharacterized protein 98.1 3.4E-06 1.2E-10 71.4 6.7 44 451-495 27-71 (158)
386 3kij_A Probable glutathione pe 98.1 3.7E-06 1.3E-10 73.0 6.8 45 451-496 37-81 (180)
387 3lwa_A Secreted thiol-disulfid 98.1 3.2E-06 1.1E-10 73.6 6.4 45 451-496 58-108 (183)
388 2f9s_A Thiol-disulfide oxidore 98.1 3E-06 1E-10 71.1 5.9 46 451-497 25-70 (151)
389 3lor_A Thiol-disulfide isomera 98.1 3.9E-06 1.3E-10 71.1 6.6 44 451-495 29-73 (160)
390 3hdc_A Thioredoxin family prot 98.1 4.9E-06 1.7E-10 70.5 6.8 45 451-496 40-84 (158)
391 2b1k_A Thiol:disulfide interch 98.1 2.8E-06 9.5E-11 72.8 5.3 52 440-496 39-90 (168)
392 2f8a_A Glutathione peroxidase 98.1 3.4E-06 1.2E-10 75.0 6.0 44 451-495 46-89 (208)
393 2lja_A Putative thiol-disulfid 98.1 4.5E-06 1.5E-10 70.1 6.4 47 451-498 29-75 (152)
394 3c1r_A Glutaredoxin-1; oxidize 98.1 3.5E-06 1.2E-10 67.4 5.3 69 101-179 16-92 (118)
395 2yan_A Glutaredoxin-3; oxidore 98.1 8.6E-06 2.9E-10 63.6 7.5 66 101-179 8-82 (105)
396 3kcm_A Thioredoxin family prot 98.1 6.3E-06 2.1E-10 69.3 7.1 46 451-497 27-72 (154)
397 1z6m_A Conserved hypothetical 98.1 2.2E-05 7.7E-10 67.6 10.6 83 109-196 26-174 (175)
398 3gl3_A Putative thiol:disulfid 98.1 5.5E-06 1.9E-10 69.5 6.3 47 451-498 27-73 (152)
399 2p31_A CL683, glutathione pero 98.1 4.6E-06 1.6E-10 72.5 6.0 45 451-496 48-92 (181)
400 2p5q_A Glutathione peroxidase 98.0 5.3E-06 1.8E-10 71.1 6.0 45 451-496 31-75 (170)
401 2v1m_A Glutathione peroxidase; 98.0 5.4E-06 1.8E-10 71.0 6.0 45 451-496 30-74 (169)
402 3nzn_A Glutaredoxin; structura 98.0 1.6E-05 5.5E-10 61.8 8.0 71 112-195 22-101 (103)
403 3dwv_A Glutathione peroxidase- 98.0 3.5E-06 1.2E-10 73.6 4.6 44 451-495 45-88 (187)
404 3fw2_A Thiol-disulfide oxidore 98.0 8.7E-06 3E-10 68.2 6.7 46 451-497 32-80 (150)
405 4evm_A Thioredoxin family prot 98.0 8.9E-06 3E-10 66.6 6.6 43 451-495 21-63 (138)
406 2klx_A Glutaredoxin; thioredox 98.0 6.5E-06 2.2E-10 62.1 5.2 55 114-179 8-65 (89)
407 3ha9_A Uncharacterized thiored 98.0 7.5E-06 2.6E-10 69.8 6.3 42 451-495 36-77 (165)
408 2lqo_A Putative glutaredoxin R 98.0 2E-05 6.8E-10 59.5 7.8 75 113-200 5-84 (92)
409 3gv1_A Disulfide interchange p 98.0 1.6E-05 5.4E-10 66.1 7.9 82 109-201 13-140 (147)
410 2rem_A Disulfide oxidoreductas 98.0 3.3E-05 1.1E-09 67.7 10.4 41 110-153 25-65 (193)
411 3l9v_A Putative thiol-disulfid 98.0 1.1E-05 3.8E-10 70.5 6.9 42 110-154 14-58 (189)
412 3bj5_A Protein disulfide-isome 98.0 0.00011 3.8E-09 61.0 12.6 109 93-204 14-131 (147)
413 3feu_A Putative lipoprotein; a 98.0 1.9E-05 6.5E-10 68.7 8.3 30 110-139 22-51 (185)
414 3qmx_A Glutaredoxin A, glutare 98.0 1.3E-05 4.4E-10 61.7 6.2 58 111-179 15-77 (99)
415 2vup_A Glutathione peroxidase- 98.0 7.8E-06 2.7E-10 71.6 5.6 45 451-496 47-91 (190)
416 2l5o_A Putative thioredoxin; s 98.0 1.2E-05 4.2E-10 67.4 6.7 44 451-495 27-70 (153)
417 2obi_A PHGPX, GPX-4, phospholi 97.9 9.5E-06 3.2E-10 70.6 6.0 45 451-496 46-90 (183)
418 3rhb_A ATGRXC5, glutaredoxin-C 97.9 1.4E-05 4.8E-10 63.4 6.4 66 101-179 10-83 (113)
419 2gs3_A PHGPX, GPX-4, phospholi 97.9 1E-05 3.4E-10 70.6 6.0 45 451-496 48-92 (185)
420 1un2_A DSBA, thiol-disulfide i 97.9 2.2E-06 7.4E-11 75.4 1.5 44 110-156 113-159 (197)
421 4f82_A Thioredoxin reductase; 97.9 3.3E-05 1.1E-09 65.8 8.6 75 102-178 40-150 (176)
422 2lus_A Thioredoxion; CR-Trp16, 97.2 1.4E-06 4.7E-11 72.4 0.0 46 452-497 25-72 (143)
423 3sbc_A Peroxiredoxin TSA1; alp 97.9 3.4E-05 1.2E-09 68.0 8.9 88 109-198 51-179 (216)
424 3cmi_A Peroxiredoxin HYR1; thi 97.9 7.8E-06 2.7E-10 70.2 4.6 43 451-495 31-73 (171)
425 1kng_A Thiol:disulfide interch 97.9 7.9E-06 2.7E-10 68.8 4.5 42 452-497 42-83 (156)
426 3ia1_A THIO-disulfide isomeras 97.9 8.6E-06 3E-10 68.5 4.6 39 453-495 31-69 (154)
427 3msz_A Glutaredoxin 1; alpha-b 97.9 3.3E-05 1.1E-09 58.0 7.1 74 113-200 5-87 (89)
428 2ls5_A Uncharacterized protein 97.1 1.9E-06 6.6E-11 73.1 0.0 48 451-498 32-80 (159)
429 3keb_A Probable thiol peroxida 97.9 3.7E-05 1.3E-09 68.3 8.1 84 109-199 47-175 (224)
430 2k8s_A Thioredoxin; dimer, str 97.9 2.6E-06 8.8E-11 62.9 0.5 38 455-494 3-40 (80)
431 4dvc_A Thiol:disulfide interch 97.8 8.9E-05 3E-09 64.3 10.2 86 109-199 20-181 (184)
432 3u5r_E Uncharacterized protein 97.8 2.2E-05 7.4E-10 70.4 6.2 43 452-495 58-101 (218)
433 2cvb_A Probable thiol-disulfid 97.8 2.8E-05 9.6E-10 67.8 6.5 44 451-496 32-75 (188)
434 2dlx_A UBX domain-containing p 97.8 5E-06 1.7E-10 69.5 1.6 53 442-496 29-87 (153)
435 3kh7_A Thiol:disulfide interch 97.8 2.1E-05 7.1E-10 67.9 5.5 39 452-495 58-96 (176)
436 2hyx_A Protein DIPZ; thioredox 97.8 2.3E-05 7.8E-10 75.2 6.2 44 452-496 82-125 (352)
437 2k6v_A Putative cytochrome C o 97.8 1.6E-05 5.4E-10 68.2 4.6 47 451-497 34-83 (172)
438 1fov_A Glutaredoxin 3, GRX3; a 97.8 4.6E-05 1.6E-09 56.2 6.5 67 114-196 3-73 (82)
439 1wjk_A C330018D20RIK protein; 97.8 3.6E-06 1.2E-10 65.1 0.2 38 452-495 15-52 (100)
440 2ywi_A Hypothetical conserved 97.8 1.7E-05 5.9E-10 69.7 4.7 44 452-496 45-89 (196)
441 3drn_A Peroxiredoxin, bacterio 97.8 3E-05 1E-09 65.8 5.9 43 452-495 28-72 (161)
442 2ggt_A SCO1 protein homolog, m 97.7 3.4E-05 1.2E-09 65.5 5.9 46 452-497 23-72 (164)
443 2rli_A SCO2 protein homolog, m 97.7 3.5E-05 1.2E-09 66.0 6.0 45 452-496 26-74 (171)
444 1xvw_A Hypothetical protein RV 97.7 2.4E-05 8.3E-10 66.2 4.7 44 452-496 35-80 (160)
445 2khp_A Glutaredoxin; thioredox 97.7 4.7E-05 1.6E-09 57.6 5.7 55 114-179 8-66 (92)
446 1ego_A Glutaredoxin; electron 97.7 1.4E-05 4.8E-10 59.5 2.6 40 456-498 3-42 (85)
447 2i3y_A Epididymal secretory gl 97.7 4.7E-05 1.6E-09 67.7 6.2 43 451-495 55-97 (215)
448 2ec4_A FAS-associated factor 1 97.7 0.00045 1.5E-08 59.1 11.8 89 108-199 53-167 (178)
449 3kp9_A Vkorc1/thioredoxin doma 97.6 9.1E-06 3.1E-10 75.3 0.8 28 454-481 199-226 (291)
450 3ctg_A Glutaredoxin-2; reduced 97.6 2.5E-05 8.7E-10 63.3 3.2 72 100-179 27-104 (129)
451 3h8q_A Thioredoxin reductase 3 97.6 7.6E-05 2.6E-09 59.1 5.6 66 100-178 7-79 (114)
452 4eo3_A Bacterioferritin comigr 97.6 0.00032 1.1E-08 66.5 10.7 98 96-199 10-138 (322)
453 2r37_A Glutathione peroxidase 97.6 7E-05 2.4E-09 66.3 5.6 43 451-495 37-79 (207)
454 1qmv_A Human thioredoxin perox 97.6 6.8E-05 2.3E-09 65.9 5.5 45 451-496 33-78 (197)
455 1we0_A Alkyl hydroperoxide red 97.6 5.3E-05 1.8E-09 66.0 4.7 44 452-496 31-75 (187)
456 2bmx_A Alkyl hydroperoxidase C 97.6 6E-05 2E-09 66.2 4.9 44 452-496 45-89 (195)
457 2e7p_A Glutaredoxin; thioredox 97.5 3.8E-05 1.3E-09 61.0 3.1 37 453-496 20-56 (116)
458 1xzo_A BSSCO, hypothetical pro 97.5 5.5E-05 1.9E-09 64.9 4.2 46 451-496 32-79 (174)
459 2jsy_A Probable thiol peroxida 97.5 9.9E-05 3.4E-09 62.9 5.6 43 451-496 43-86 (167)
460 1zof_A Alkyl hydroperoxide-red 97.5 5.2E-05 1.8E-09 66.8 3.9 45 451-496 32-77 (198)
461 3l9s_A Thiol:disulfide interch 97.5 0.0002 6.7E-09 62.5 7.6 40 110-152 21-63 (191)
462 1wik_A Thioredoxin-like protei 97.5 0.00018 6.3E-09 56.3 6.5 66 100-178 5-79 (109)
463 3ztl_A Thioredoxin peroxidase; 97.5 0.00011 3.8E-09 65.9 5.5 45 451-496 68-113 (222)
464 3hd5_A Thiol:disulfide interch 97.5 0.00017 5.7E-09 63.3 6.5 45 451-497 24-68 (195)
465 1uul_A Tryparedoxin peroxidase 97.5 0.00012 4E-09 64.7 5.4 44 452-496 36-80 (202)
466 2b7k_A SCO1 protein; metalloch 97.5 0.00011 3.8E-09 64.7 5.2 46 451-496 40-88 (200)
467 2h01_A 2-Cys peroxiredoxin; th 97.4 9.3E-05 3.2E-09 64.8 3.9 45 451-496 30-75 (192)
468 2pn8_A Peroxiredoxin-4; thiore 97.4 0.00017 5.7E-09 64.2 5.5 44 452-496 48-92 (211)
469 2i81_A 2-Cys peroxiredoxin; st 97.4 0.00012 4.2E-09 65.1 4.6 45 451-496 51-96 (213)
470 3gkn_A Bacterioferritin comigr 97.4 0.00016 5.3E-09 61.3 5.1 43 452-495 35-78 (163)
471 3hz8_A Thiol:disulfide interch 97.4 0.00026 8.9E-09 61.9 6.3 46 451-498 23-68 (193)
472 2c0d_A Thioredoxin peroxidase 97.3 0.00013 4.5E-09 65.3 4.4 45 451-496 55-100 (221)
473 3gha_A Disulfide bond formatio 97.3 0.0019 6.6E-08 56.7 11.8 88 109-201 28-193 (202)
474 1zye_A Thioredoxin-dependent p 97.3 0.00016 5.5E-09 64.7 4.9 44 452-496 56-100 (220)
475 3tue_A Tryparedoxin peroxidase 97.3 0.0015 5.2E-08 57.6 10.8 88 109-198 55-183 (219)
476 3ixr_A Bacterioferritin comigr 97.3 0.00034 1.2E-08 60.3 6.3 44 452-496 51-95 (179)
477 2wfc_A Peroxiredoxin 5, PRDX5; 97.2 0.00028 9.5E-09 60.1 5.0 44 451-495 30-76 (167)
478 1q98_A Thiol peroxidase, TPX; 97.2 0.0003 1E-08 59.7 5.2 42 452-496 43-85 (165)
479 1tp9_A Peroxiredoxin, PRX D (t 97.2 0.00026 8.8E-09 60.0 4.7 44 451-495 34-80 (162)
480 1xvq_A Thiol peroxidase; thior 97.2 0.00026 9.1E-09 60.8 4.8 41 452-496 44-85 (175)
481 1n8j_A AHPC, alkyl hydroperoxi 97.2 0.00032 1.1E-08 60.9 5.2 44 452-496 30-74 (186)
482 1psq_A Probable thiol peroxida 97.2 0.00038 1.3E-08 59.0 4.9 43 451-496 41-84 (163)
483 2pwj_A Mitochondrial peroxired 97.1 0.00017 5.7E-09 61.8 2.6 42 453-495 45-88 (171)
484 2a4v_A Peroxiredoxin DOT5; yea 97.1 0.00065 2.2E-08 57.2 6.3 41 453-495 36-77 (159)
485 2yzh_A Probable thiol peroxida 97.1 0.0004 1.4E-08 59.3 5.0 42 452-496 47-89 (171)
486 3me7_A Putative uncharacterize 97.1 0.00052 1.8E-08 58.6 5.6 45 452-496 28-74 (170)
487 3uma_A Hypothetical peroxiredo 97.1 0.00045 1.5E-08 59.8 4.8 43 452-495 56-101 (184)
488 1nm3_A Protein HI0572; hybrid, 97.0 0.00058 2E-08 62.0 5.4 44 451-495 32-78 (241)
489 3qpm_A Peroxiredoxin; oxidored 97.0 0.00081 2.8E-08 60.9 6.0 44 452-496 77-121 (240)
490 4g2e_A Peroxiredoxin; redox pr 97.0 0.00013 4.3E-09 61.6 0.6 43 452-495 30-73 (157)
491 1h75_A Glutaredoxin-like prote 97.0 0.00042 1.4E-08 50.8 3.3 35 456-498 3-37 (81)
492 3f4s_A Alpha-DSBA1, putative u 97.0 0.0048 1.6E-07 55.1 10.7 93 109-202 38-213 (226)
493 3h93_A Thiol:disulfide interch 97.0 0.0012 4.2E-08 57.5 6.6 44 451-496 24-67 (192)
494 3l4n_A Monothiol glutaredoxin- 96.9 0.0016 5.5E-08 52.2 6.4 70 101-178 5-79 (127)
495 3zrd_A Thiol peroxidase; oxido 96.9 0.00092 3.2E-08 58.7 4.8 42 452-496 78-120 (200)
496 3tjj_A Peroxiredoxin-4; thiore 96.8 0.00095 3.3E-08 60.9 4.7 44 452-496 91-135 (254)
497 1r7h_A NRDH-redoxin; thioredox 96.8 0.00086 3E-08 48.1 3.3 35 456-498 3-37 (75)
498 3l9v_A Putative thiol-disulfid 96.8 0.00059 2E-08 59.4 2.9 43 452-496 14-59 (189)
499 4hde_A SCO1/SENC family lipopr 96.7 0.0016 5.5E-08 55.5 5.2 45 451-495 31-77 (170)
500 1eej_A Thiol:disulfide interch 96.7 0.0008 2.7E-08 59.9 3.3 38 451-493 85-122 (216)
No 1
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=1.7e-58 Score=473.75 Aligned_cols=394 Identities=34% Similarity=0.610 Sum_probs=351.7
Q ss_pred CcEEeChhcHHHHHhCC---CeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccE
Q 010469 94 DVVVLKERNFSDVIENN---KFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (510)
Q Consensus 94 ~v~~l~~~~~~~~~~~~---~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~ 170 (510)
.|..|++++|++.+.++ ++++|+|||+||++|+++.|.|+++++.+++ .+.++.|||++++++|++|+|+++||
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt 78 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKG---IVPLAKVDCTANTNTCNKYGVSGYPT 78 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCCEEEEETTTCHHHHHHTTCCEESE
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcC---ceEEEEEECCCCHHHHHhcCCCCCCE
Confidence 58899999999999777 9999999999999999999999999999987 59999999999999999999999999
Q ss_pred EEEEeCC-eeeeecCCCCHHHHHHHHHHHcCCCcccccchhHHHHhccCCCeEEEEEecCCCCcchHHHHHhc-cccCce
Q 010469 171 IYFFVDG-QHKAYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADAS-RLEDDV 248 (510)
Q Consensus 171 ~~~~~~g-~~~~y~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~ 248 (510)
+++|++| ....|.|.++.+.|.+|+.+.+++++..+.+.+++++++..++..+|+||.+.+......|..+| .+++++
T Consensus 79 l~~~~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~f~~~a~~~~~~~ 158 (481)
T 3f8u_A 79 LKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNY 158 (481)
T ss_dssp EEEEETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHHHHHHHHHHHHHTTTS
T ss_pred EEEEeCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcCCcEEEEEECCCccchHHHHHHHHHHhccCc
Confidence 9999999 56799999999999999999999999999999999999999999999999887888888998887 678999
Q ss_pred eEEEcCChhHHHhhCCCCCCCCCeEEEec------cCCCceeeccC-CCCCHHHHHHHHHhcCCCceeecCCCchhhhcc
Q 010469 249 NFYQTTNPDVAKIFHLDSKVNRPALVMVK------KETEKISYFAD-GKFDKSTIADFVFSNKLPLVTIFTRENAPSVFE 321 (510)
Q Consensus 249 ~f~~~~~~~l~~~~~~~~~~~~p~l~~~~------~~~~~~~~y~~-g~~~~~~i~~fi~~~~~p~~~~lt~~~~~~~~~ 321 (510)
.|+.+.+.+++++++++. +.+++|+ ..++....| . |.++.++|.+||..+++|+++++|.+|+..++.
T Consensus 159 ~F~~~~~~~~~~~~~v~~----~~i~~~~p~~~~~~~~~~~~~y-~~~~~~~~~l~~fi~~~~~p~v~e~t~~n~~~~~~ 233 (481)
T 3f8u_A 159 RFAHTNVESLVNEYDDNG----EGIILFRPSHLTNKFEDKTVAY-TEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQG 233 (481)
T ss_dssp CEEEECCHHHHHHHCSSS----EEEEEECCGGGCBTTBCSEEEC-CCSSCCHHHHHHHHHHHTTTTSCEECTTTHHHHTT
T ss_pred eEEEECCHHHHHHhCCCC----CcEEEEecccccCccCCccccc-CCCCCCHHHHHHHHHHhCCCCccccChhHHHHhcC
Confidence 999999999999999985 5688898 445677888 6 889999999999999999999999999999975
Q ss_pred CCccceEEEEEec-c-c---hhhHHHHHHHHHHhccCc---eEEEEEEcCCcccccchhhhcCCC--CCCCcEEEEeeCC
Q 010469 322 SPIKNQLLLFAVS-N-D---SEKLLPVFEEAAKSFKGK---LIFVYVQMDNEDVGKPVSEYFGIT--GEAPKVLAYTGND 391 (510)
Q Consensus 322 ~~~~~~~v~~~~~-~-~---~~~~~~~~~~~A~~~~~~---~~f~~vd~~~~~~~~~l~~~~gi~--~~~~P~~~i~~~~ 391 (510)
.+ ..++++... . . .+.+.+.++++|++|+++ +.|+++|+.. ....++.||++ ..+.|.+++.+ .
T Consensus 234 ~~--~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~---~~~~l~~~gl~~~~~~~P~~~i~~-~ 307 (481)
T 3f8u_A 234 KD--LLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKT---FSHELSDFGLESTAGEIPVVAIRT-A 307 (481)
T ss_dssp SS--EEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTT---THHHHGGGTCCCCTTCSCEEEEEC-S
T ss_pred CC--ceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHH---HHHHHHHcCCCcccCCCcEEEEEc-C
Confidence 43 333333222 1 1 223678899999999998 9999999765 34567899998 34789999987 5
Q ss_pred CCCcccCCCCCCHH--HHHHHHHHhhcCcccccccCCCCCCCCCCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhh
Q 010469 392 DAKKHILDGELTLD--KIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQA 469 (510)
Q Consensus 392 ~~~~y~~~~~~t~e--~i~~Fi~~~~~Gkl~~~~kSe~~p~~~~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~ 469 (510)
++.+|.+.++++.+ +|.+|++++++|+++++++|+++|+...+.++.+++++|++.+.+++++|+|+|||+||++|+.
T Consensus 308 ~~~ky~~~~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~ 387 (481)
T 3f8u_A 308 KGEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKN 387 (481)
T ss_dssp SSCEEECCSCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHH
T ss_pred CCcccCCCcccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHH
Confidence 56889998899999 9999999999999999999999999888999999999999999888899999999999999999
Q ss_pred hhHHHHHHHHHhcCCCcEEEEEEeCCCCcCcc
Q 010469 470 FEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHR 501 (510)
Q Consensus 470 ~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~ 501 (510)
+.|.+.++++.+++..++.|+++|++.|+.+.
T Consensus 388 ~~p~~~~l~~~~~~~~~v~~~~id~~~~~~~~ 419 (481)
T 3f8u_A 388 LEPKYKELGEKLSKDPNIVIAKMDATANDVPS 419 (481)
T ss_dssp HHHHHHHHHHHTTTCSSEEEEEEETTSSCCCT
T ss_pred hhHHHHHHHHHhccCCCEEEEEEECCchhhHh
Confidence 99999999999987668999999999996553
No 2
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=1e-56 Score=462.91 Aligned_cols=390 Identities=30% Similarity=0.513 Sum_probs=346.5
Q ss_pred CCCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 92 DKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
.+.|..|+.++|++.+.++++++|+|||+||++|+++.|.|+++++.+++. ++.++.|||++++.+|++|+|+++||+
T Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 90 (504)
T 2b5e_A 13 DSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK--NITLAQIDCTENQDLCMEHNIPGFPSL 90 (504)
T ss_dssp TSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT--TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC--CeEEEEEECCCCHHHHHhcCCCcCCEE
Confidence 457999999999999999999999999999999999999999999999872 599999999999999999999999999
Q ss_pred EEEeCCe---eeeecCCCCHHHHHHHHHHHcCCCcccccchhHHHHhccCCC--eEEEEEecCCCCcchHHHHHhc-ccc
Q 010469 172 YFFVDGQ---HKAYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSET--KVVLGYLNSLVGSESEVLADAS-RLE 245 (510)
Q Consensus 172 ~~~~~g~---~~~y~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~-~~~ 245 (510)
++|++|. ...|.|.++.+.|.+|+.+.+++++..+++ ++.++..++ ..+|+||.+.+......|..+| .++
T Consensus 91 ~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~~v~~i~~---~~~~~~~~~~~~~~v~~f~~~~~~~~~~f~~~A~~~~ 167 (504)
T 2b5e_A 91 KIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVVAD---LPAYLANETFVTPVIVQSGKIDADFNATFYSMANKHF 167 (504)
T ss_dssp EEEETTCTTCEEECCSCCSHHHHHHHHHHHTSCSEEECSC---HHHHHHHSCCSSCEEEEEESCCHHHHHHHHHHHHHTT
T ss_pred EEEeCCccccceeecCCCCHHHHHHHHHHhcCCcceeHHH---HHHHHhcCCCceEEEEEeCCCCchHHHHHHHHHHHhh
Confidence 9999995 789999999999999999999999999887 788887777 8899999887777788888877 678
Q ss_pred CceeEEEcCChhHHHhhCCCCCCCCCeEEEeccCCCceeeccCCC-C---CHHHHHHHHHhcCCCceeecCCCchhhhcc
Q 010469 246 DDVNFYQTTNPDVAKIFHLDSKVNRPALVMVKKETEKISYFADGK-F---DKSTIADFVFSNKLPLVTIFTRENAPSVFE 321 (510)
Q Consensus 246 ~~~~f~~~~~~~l~~~~~~~~~~~~p~l~~~~~~~~~~~~y~~g~-~---~~~~i~~fi~~~~~p~~~~lt~~~~~~~~~ 321 (510)
+++.|+.+. +++++++++ +++|+..+ ....| .|. + +.+.|.+||..+++|+++++|.+++..++.
T Consensus 168 ~~~~F~~~~--~~~~~~~~~-------i~l~~~~~-~~~~~-~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~~~~~~~ 236 (504)
T 2b5e_A 168 NDYDFVSAE--NADDDFKLS-------IYLPSAMD-EPVVY-NGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQYVE 236 (504)
T ss_dssp TTCEEEEEE--CTTSCCEEE-------EEETTEEE-EEEEC-CSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHHHHHHHH
T ss_pred cCcEEEEEH--HHHHhcCCe-------EEecCCCC-ccccc-CCcccccCCHHHHHHHHHhcccCCcccCCHhHHHHHhc
Confidence 999999887 566666652 78888765 77788 888 6 899999999999999999999999999998
Q ss_pred CCccceEEEEEeccchhhHHHHHHHHHHhccCceEEEEEEcCCcccccchhhhcCCCCCCCcEEEEeeCCCCCcccCC--
Q 010469 322 SPIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILD-- 399 (510)
Q Consensus 322 ~~~~~~~v~~~~~~~~~~~~~~~~~~A~~~~~~~~f~~vd~~~~~~~~~l~~~~gi~~~~~P~~~i~~~~~~~~y~~~-- 399 (510)
.+.+.+++++......+.+.+.++++|++|++++.|+|+|+.. ...+++.||+ ..+.|++++++..++.+|.+.
T Consensus 237 ~~~~~~~l~~~~~~~~~~~~~~l~~~a~~~~~~i~F~~id~~~---~~~~~~~~gl-~~~~P~v~i~~~~~~~ky~~~~~ 312 (504)
T 2b5e_A 237 SGLPLGYLFYNDEEELEEYKPLFTELAKKNRGLMNFVSIDARK---FGRHAGNLNM-KEQFPLFAIHDMTEDLKYGLPQL 312 (504)
T ss_dssp TTSCEEEEEESSHHHHHHHHHHHHHHHHHTTTTCEEEEEEHHH---HTTHHHHTTC-CSCSSEEEEEETTTTEEEECCCC
T ss_pred CCCcEEEEEecCcccHHHHHHHHHHHHHhcCCeeEEEEEehhh---hHHHHHHcCC-cccCCEEEEEeCCcCcccCCCCC
Confidence 8876655554443445778999999999999999999999865 4468899999 778999999988777788876
Q ss_pred CC-----------CCHHHHHHHHHHhhcCcccccccCCCCCCCCCCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhh
Q 010469 400 GE-----------LTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQ 468 (510)
Q Consensus 400 ~~-----------~t~e~i~~Fi~~~~~Gkl~~~~kSe~~p~~~~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~ 468 (510)
++ ++.+.|.+|+.++..|++.|.++|+++|+...+.+..+++++|++.+.+.+++|||+|||+||++|+
T Consensus 313 ~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~ 392 (504)
T 2b5e_A 313 SEEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCK 392 (504)
T ss_dssp CHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHH
T ss_pred ccchhhccccccccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceecccccHHHhhccCCCCEEEEEECCCChhHH
Confidence 55 8999999999999999999999999999888889999999999999988889999999999999999
Q ss_pred hhhHHHHHHHHHhc-CCCcEEEEEEeCCCCcCcc
Q 010469 469 AFEPTYNKLAKHLR-GVDSIVIAKMDGTTNEHHR 501 (510)
Q Consensus 469 ~~~~~~~~~a~~~~-~~~~~~~~~id~~~n~~~~ 501 (510)
.+.|.+.++++.+. ...++.++.+|++.|+.+.
T Consensus 393 ~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~ 426 (504)
T 2b5e_A 393 RLAPTYQELADTYANATSDVLIAKLDHTENDVRG 426 (504)
T ss_dssp HHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCSS
T ss_pred HHhHHHHHHHHHhhccCCcEEEEEecCCcccccc
Confidence 99999999999886 3357999999999988663
No 3
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=2.2e-45 Score=361.32 Aligned_cols=326 Identities=17% Similarity=0.259 Sum_probs=280.7
Q ss_pred CccCC-CCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhh------HHHHHHHHHHhhcCCCeEEEEEeCcccHHHH
Q 010469 88 PEIDD-KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALA------PEYAAAATELKSANESVVLAKVDATEENELA 160 (510)
Q Consensus 88 ~~~~~-~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~------p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~ 160 (510)
|..+. +.|+.|+.++|++++.++++++|.||||||+||+... |.|+++++.+++ .++.++.|||++++++|
T Consensus 7 p~~~~~~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~--~~v~~~~Vd~~~~~~l~ 84 (367)
T 3us3_A 7 PEYDGVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLED--KGVGFGLVDSEKDAAVA 84 (367)
T ss_dssp CCCCCCCCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTT--TTEEEEEEETTTTHHHH
T ss_pred CCCCCCCccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhc--CCceEEEEeCcccHHHH
Confidence 34433 4799999999999998899999999999999974433 799999999876 35999999999999999
Q ss_pred HhCCCCcccEEEEEeCCeeeeecCCCCHHHHHHHHHHHcCCCcccccchhHHHHhcc-CCCeEEEEEecCCCCcchHHHH
Q 010469 161 HEYDVQGFPTIYFFVDGQHKAYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLT-SETKVVLGYLNSLVGSESEVLA 239 (510)
Q Consensus 161 ~~~~v~~~P~~~~~~~g~~~~y~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~ 239 (510)
++|+|+++||+++|++|....|.|.++.+.|.+|+.+.+++++..+++.+++++++. +++..+|+||.+.+......|.
T Consensus 85 ~~~~V~~~PTl~~f~~G~~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~f~ 164 (367)
T 3us3_A 85 KKLGLTEEDSIYVFKEDEVIEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNKDSEHYKAFK 164 (367)
T ss_dssp HHHTCCSTTEEEEEETTEEEECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTCHHHHHHH
T ss_pred HHcCCCcCceEEEEECCcEEEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCCCchHHHHHH
Confidence 999999999999999998889999999999999999999999999999999999998 6788999999888888888898
Q ss_pred Hhc-cccCceeEEEcCChhHHHhhCCCCCCCCCeEEEeccCCCceeeccCC-CCCHHHHHHHHHhcCCCceeecCCCchh
Q 010469 240 DAS-RLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVMVKKETEKISYFADG-KFDKSTIADFVFSNKLPLVTIFTRENAP 317 (510)
Q Consensus 240 ~~~-~~~~~~~f~~~~~~~l~~~~~~~~~~~~p~l~~~~~~~~~~~~y~~g-~~~~~~i~~fi~~~~~p~~~~lt~~~~~ 317 (510)
.+| .+++++.|+.+.+++++++++++. |+|++|++.++....| .| .++.++|.+||..++.|+++++|.+++.
T Consensus 165 ~~A~~~~~~~~F~~~~~~~~~~~~~v~~----p~i~lf~~~~~~~~~y-~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~ 239 (367)
T 3us3_A 165 EAAEEFHPYIPFFATFDSKVAKKLTLKL----NEIDFYEAFMEEPVTI-PDKPNSEEEIVNFVEEHRRSTLRKLKPESMY 239 (367)
T ss_dssp HHHHHHTTTSCEEEECCHHHHHHHTCCT----TCEEEECTTCSSCEEC-SSSSCCHHHHHHHHHHTCSCSEEECCGGGHH
T ss_pred HHHHhhcCCcEEEEECCHHHHHHcCCCC----CeEEEEcCCCCCCeec-CCCCCCHHHHHHHHHHcCccceeecChhhHH
Confidence 887 678899999999999999999984 9999999977778899 77 4899999999999999999999999998
Q ss_pred hhccCCcc-ceEEEEEecc--chhhHHHHHHHHHHhccC--ceEEEEEEcCCcccccch---hhhcCCCCCCCcEEEEee
Q 010469 318 SVFESPIK-NQLLLFAVSN--DSEKLLPVFEEAAKSFKG--KLIFVYVQMDNEDVGKPV---SEYFGITGEAPKVLAYTG 389 (510)
Q Consensus 318 ~~~~~~~~-~~~v~~~~~~--~~~~~~~~~~~~A~~~~~--~~~f~~vd~~~~~~~~~l---~~~~gi~~~~~P~~~i~~ 389 (510)
.++.++.. .++++|.+.. .+.++.+.++++|++|++ ++.|+|+|+... ...+ .+.||++ ...|.+++++
T Consensus 240 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~--~~~l~~~~~~fgl~-~~~P~~~i~~ 316 (367)
T 3us3_A 240 ETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDF--PLLVPYWEKTFDID-LSAPQIGVVN 316 (367)
T ss_dssp HHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGC--TTTHHHHHHHHTCC-TTSCEEEEEE
T ss_pred HHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccc--hhHHHHHHHhcCCC-CCCCeEEEEe
Confidence 88765433 5566677653 367889999999999998 799999998763 2221 3459998 4689999998
Q ss_pred CCCC--CcccCCC---CCCHHHHHHHHHHhhcCcccccc
Q 010469 390 NDDA--KKHILDG---ELTLDKIKTFGEDFLEGKLKPFF 423 (510)
Q Consensus 390 ~~~~--~~y~~~~---~~t~e~i~~Fi~~~~~Gkl~~~~ 423 (510)
..++ .+|.+.+ .+|.++|.+|++++++|+++|.-
T Consensus 317 ~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl~p~~ 355 (367)
T 3us3_A 317 VTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGEINTED 355 (367)
T ss_dssp TTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHTSSCC--
T ss_pred cccccceeecCCcccccCCHHHHHHHHHHHHcCCcCccc
Confidence 7655 4676664 79999999999999999999853
No 4
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-45 Score=366.08 Aligned_cols=351 Identities=23% Similarity=0.365 Sum_probs=261.2
Q ss_pred CCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhc---CCCeEEEEEeCcccHHHHHhCCCCccc
Q 010469 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSA---NESVVLAKVDATEENELAHEYDVQGFP 169 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~---~~~v~~~~vd~~~~~~~~~~~~v~~~P 169 (510)
+.|..|++++|++++.++++++|+|||+||++|+++.|.|+++++.+++. ..++.++.|||++++++|++|+|+++|
T Consensus 5 ~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~P 84 (382)
T 2r2j_A 5 SEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYP 84 (382)
T ss_dssp ---CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEES
T ss_pred CceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCC
Confidence 45888999999999988999999999999999999999999999999642 125999999999999999999999999
Q ss_pred EEEEEeCCeee--eecCCCCHHHHHHHHHHHcCCCcccccchhHHHHhccCCCeEEEEEecCCCCcchHHHHHhc-cccC
Q 010469 170 TIYFFVDGQHK--AYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADAS-RLED 246 (510)
Q Consensus 170 ~~~~~~~g~~~--~y~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~ 246 (510)
|+++|++|... .|.|.++.+.|.+|+.+.+++++..+.+.++++. +..+...+|+||.+...+....|..+| .+++
T Consensus 85 t~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~~~~~f~~~A~~~~~ 163 (382)
T 2r2j_A 85 TLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKDSDNYRVFERVANILHD 163 (382)
T ss_dssp EEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEEESCSSSHHHHHHHHHHHHHTT
T ss_pred EEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCCCChhHHHHHHHHHHhhc
Confidence 99999999553 6999999999999999999999999988888888 677778899999887777777888877 6788
Q ss_pred ceeEEEcCChhHHHhhCCCCCCCCCeEEEeccC--CCceeeccCCCC-CHHHHHHHHHhcCCCceeecCCCchhhhccCC
Q 010469 247 DVNFYQTTNPDVAKIFHLDSKVNRPALVMVKKE--TEKISYFADGKF-DKSTIADFVFSNKLPLVTIFTRENAPSVFESP 323 (510)
Q Consensus 247 ~~~f~~~~~~~l~~~~~~~~~~~~p~l~~~~~~--~~~~~~y~~g~~-~~~~i~~fi~~~~~p~~~~lt~~~~~~~~~~~ 323 (510)
++.|+.+.+ ++.+.++++. .| ++|++. ......| .|.+ +.++|.+||..++.|+++++|.+++..++..+
T Consensus 164 ~~~F~~~~~-~~~~~~~v~~---~p--i~~~~~~~~~~~~~y-~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~ 236 (382)
T 2r2j_A 164 DCAFLSAFG-DVSKPERYSG---DN--IIYKPPGHSAPDMVY-LGAMTNFDVTYNWIQDKCVPLVREITFENGEELTEEG 236 (382)
T ss_dssp TCEEEEEES-CC-----------CE--EEEECSSSSSCCEEC-CSCTTCHHHHHHHHHHHHSCSSEECCHHHHHHHHTTC
T ss_pred cceEEEEeh-hhHHhhCCCC---Cc--eEECCCCCCCcCccc-CCCCCCHHHHHHHHHhcccCceEecChhhHHHHhcCC
Confidence 999998877 6778888864 46 556654 2356788 8888 89999999999999999999999999998877
Q ss_pred ccceEEEEEecc---chhhHHHHHHHHHHhccCceEEEEEEcCCcccccchhhhcCCCCCCCcEEEEeeCCCCCcccCC-
Q 010469 324 IKNQLLLFAVSN---DSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILD- 399 (510)
Q Consensus 324 ~~~~~v~~~~~~---~~~~~~~~~~~~A~~~~~~~~f~~vd~~~~~~~~~l~~~~gi~~~~~P~~~i~~~~~~~~y~~~- 399 (510)
.+.+++ |.... ..+.+...+.++|.++++++.|+|+|+.. ...+++.||++..+.|++++.+.++ .|.+.
T Consensus 237 ~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~~---~~~~~~~~gl~~~~~P~i~i~~~~~--~y~~~~ 310 (382)
T 2r2j_A 237 LPFLIL-FHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDK---FRHPLLHIQKTPADCPVIAIDSFRH--MYVFGD 310 (382)
T ss_dssp CCEEEE-EECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETTT---THHHHHHTTCCGGGCSEEEEECSSC--EEECCC
T ss_pred CcEEEE-EecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchHH---hHHHHHHcCCCccCCCEEEEEcchh--cCCCCc
Confidence 665544 44432 24556677778888899999999999875 3467899999877889999986543 35443
Q ss_pred --CCCCHHHHHHHHHHhhcCcccccccCCCCCCCC------CCceEEEeCcchhhHhhccCCcEEE
Q 010469 400 --GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETN------DGDVKIVVGNNFDEIVLDESKDVLL 457 (510)
Q Consensus 400 --~~~t~e~i~~Fi~~~~~Gkl~~~~kSe~~p~~~------~~~~~~l~~~~f~~~v~~~~~~vlv 457 (510)
+.++.++|.+|++++++|+++|++||+|+|+.+ ...+.....++|.++.-...+-.++
T Consensus 311 ~~~~~~~~~i~~F~~d~~~Gkl~p~~kse~~P~~~~~~~~~~~~~~~~~~s~f~~l~~~~~~~~~~ 376 (382)
T 2r2j_A 311 FKDVLIPGKLKQFVFDLHSGKLHREFHHGPDPTDTAPGEQAQDVASSPPESSFQKLAPSEYRYTLL 376 (382)
T ss_dssp SGGGGSTTHHHHHHHHHHHTTTSSCC-------------------CCCCCCSGGGGSCCTTTCEEC
T ss_pred cccccCHHHHHHHHHHHHCCCccccccCCCCCCCCCcccccccCCCCCCcccccccCCCccceecc
Confidence 456789999999999999999999999999876 2223456777888755433444443
No 5
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=5.6e-44 Score=350.12 Aligned_cols=316 Identities=17% Similarity=0.273 Sum_probs=277.9
Q ss_pred CCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHH-------HHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCC
Q 010469 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPE-------YAAAATELKSANESVVLAKVDATEENELAHEYDV 165 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~-------~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v 165 (510)
+.|..|++++|++.+.++++++|+||||||+ |+.++|. |+++++.+++. ++.++.|||++++++|++|+|
T Consensus 11 ~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~--~v~~~~Vd~~~~~~l~~~~~v 87 (350)
T 1sji_A 11 DRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK--DIGFVMVDAKKEAKLAKKLGF 87 (350)
T ss_dssp CCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS--SEEEEEEETTTTHHHHHHHTC
T ss_pred CccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc--CcEEEEEeCCCCHHHHHhcCC
Confidence 4699999999999998899999999999999 9999999 99999999772 599999999999999999999
Q ss_pred CcccEEEEEeCCeeeeecCCCCHHHHHHHHHHHcCCCcccccchhHHHHhcc-CCCeEEEEEecCCCCcchHHHHHhc-c
Q 010469 166 QGFPTIYFFVDGQHKAYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLT-SETKVVLGYLNSLVGSESEVLADAS-R 243 (510)
Q Consensus 166 ~~~P~~~~~~~g~~~~y~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~-~ 243 (510)
+++||+++|++|....|.|.++.+.|.+|+.+.+++++..+++.+++++++. +++..+|+||.+.+......|.++| .
T Consensus 88 ~~~Pt~~~~~~g~~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~~~~~A~~ 167 (350)
T 1sji_A 88 DEEGSLYVLKGDRTIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSEESEYYKAFEEAAEH 167 (350)
T ss_dssp CSTTEEEEEETTEEEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSHHHHHHHHHHHH
T ss_pred CccceEEEEECCcEEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCCCcHHHHHHHHHHHh
Confidence 9999999999998889999999999999999999999999999999999988 7778899999887777788898887 6
Q ss_pred ccCceeEEEcCChhHHHhhCCCCCCCCCeEEEeccCCCceeeccCCC-CCHHHHHHHHHhcCCCceeecCCCchhhhccC
Q 010469 244 LEDDVNFYQTTNPDVAKIFHLDSKVNRPALVMVKKETEKISYFADGK-FDKSTIADFVFSNKLPLVTIFTRENAPSVFES 322 (510)
Q Consensus 244 ~~~~~~f~~~~~~~l~~~~~~~~~~~~p~l~~~~~~~~~~~~y~~g~-~~~~~i~~fi~~~~~p~~~~lt~~~~~~~~~~ 322 (510)
++.++.|+.+.+++++++++++ .|++++|++.++....| .|. ++.++|.+||..++.|+++++|.+++..++.+
T Consensus 168 ~~~~~~f~~~~~~~~~~~~~v~----~p~i~~~~~~~~~~~~y-~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~ 242 (350)
T 1sji_A 168 FQPYIKFFATFDKGVAKKLSLK----MNEVDFYEPFMDEPIAI-PDKPYTEEELVEFVKEHQRPTLRRLRPEDMFETWED 242 (350)
T ss_dssp TTTTSEEEEECCHHHHHHHTCC----TTCEEEECTTCSSCEEC-SSSSCCHHHHHHHHHHHCCCSEEECCTTTHHHHHHS
T ss_pred hccCcEEEEECCHHHHHHcCCC----CCcEEEEeCCCCCceec-CCCCCCHHHHHHHHHHcCccchhhcChhhHHHHhcC
Confidence 7799999999999999999997 49999999877778889 786 89999999999999999999999999999887
Q ss_pred Cc-cceEEEEEeccc--hhhHHHHHHHHHHhccC--ceEEEEEEcCCcccccchh----hhcCCCCCCCcEEEEeeCCCC
Q 010469 323 PI-KNQLLLFAVSND--SEKLLPVFEEAAKSFKG--KLIFVYVQMDNEDVGKPVS----EYFGITGEAPKVLAYTGNDDA 393 (510)
Q Consensus 323 ~~-~~~~v~~~~~~~--~~~~~~~~~~~A~~~~~--~~~f~~vd~~~~~~~~~l~----~~~gi~~~~~P~~~i~~~~~~ 393 (510)
+. +.++++|....+ +..+.+.++++|+++++ ++.|+|+|+.. ...++ +.||++ .+.|++++++..++
T Consensus 243 ~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~---~~~~~~~~~~~~gi~-~~~P~~~i~~~~~~ 318 (350)
T 1sji_A 243 DLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDD---FPLLVAYWEKTFKID-LFKPQIGVVNVTDA 318 (350)
T ss_dssp CSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGG---CHHHHHHHHHHCCSC-TTSCEEEEEESSSS
T ss_pred CCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchh---hHHHHHHHHhhcCCC-ccCCcEEEEecccc
Confidence 65 556666766433 56889999999999987 89999999865 33456 789998 35799999987555
Q ss_pred Cccc--CC---CCCCHHHHHHHHHHhhcCccc
Q 010469 394 KKHI--LD---GELTLDKIKTFGEDFLEGKLK 420 (510)
Q Consensus 394 ~~y~--~~---~~~t~e~i~~Fi~~~~~Gkl~ 420 (510)
.+|. +. +.++.++|.+|++++++|++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~i~~F~~d~~~Gkl~ 350 (350)
T 1sji_A 319 DSVWMEIPDDDDLPTAEELEDWIEDVLSGKIN 350 (350)
T ss_dssp CEEESCSSCCSCCCCHHHHHHHHHHHHTSCC-
T ss_pred cccccCCCcccccCCHHHHHHHHHHHhcCccC
Confidence 4554 43 489999999999999999873
No 6
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=3.3e-43 Score=380.93 Aligned_cols=374 Identities=20% Similarity=0.348 Sum_probs=303.7
Q ss_pred CCCCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccE
Q 010469 91 DDKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (510)
Q Consensus 91 ~~~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~ 170 (510)
+...|..|+.++|++.+.++++++|+|||+||++|+++.|.|+++++.+++ .+.++.|||++++++|++++|.++||
T Consensus 114 ~~~~v~~l~~~~f~~~i~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt 190 (780)
T 3apo_A 114 DDPEIITLERREFDAAVNSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDG---LLRIGAVNCGDDRMLCRMKGVNSYPS 190 (780)
T ss_dssp TCTTEEECCHHHHHHHHTSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTCSSCC--------CE
T ss_pred CCcceeeechHhHHhhhcCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcC---ceEEEEEeCCCcHHHHHHcCCceeee
Confidence 345799999999999998899999999999999999999999999999977 59999999999999999999999999
Q ss_pred EEEEeCCe-eeeecCCCCHHHHHHHHHHHcCCCcccccch---hHHHHhccCCCeEEEEEecCCCC-cchHHHHHhc---
Q 010469 171 IYFFVDGQ-HKAYNGGRTKDAIVTWIKKKIGPGIYNITTL---DEAERVLTSETKVVLGYLNSLVG-SESEVLADAS--- 242 (510)
Q Consensus 171 ~~~~~~g~-~~~y~g~~~~~~l~~~i~~~~~~~~~~i~~~---~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~--- 242 (510)
+++|++|. ..+|.|.++.+.|.+|+.+.+++.+..+.+. +++++++..+...+++|+..... +....+.+++
T Consensus 191 ~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~vi~f~~~~~~~~~~~~~~~l~~~f 270 (780)
T 3apo_A 191 LFIFRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETAFAAGVGWLITFCSKGEDCLTSQTRLRLSGML 270 (780)
T ss_dssp EEEECTTSCCEECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHHHHHTCEEEEEEECTTSCCCCHHHHHHHHHHT
T ss_pred EEEEeCCcEeeEecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhhhccCCCEEEEEecCcccccCHHHHHHHHHHh
Confidence 99999995 6799999999999999999999999999887 68888887777777777765431 1212222111
Q ss_pred --------------------------------------------------------------------------------
Q 010469 243 -------------------------------------------------------------------------------- 242 (510)
Q Consensus 243 -------------------------------------------------------------------------------- 242 (510)
T Consensus 271 ~~~~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~~~~y~g~~~~~~i~~~i~~~~p~v~~it~~~f~~~~~ 350 (780)
T 3apo_A 271 DGLVNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNLPDFELLSANQLEDRLA 350 (780)
T ss_dssp TTTEEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGGGSEEECCCCHHHHHHHHHHHSCCCCEECHHHHHHHHT
T ss_pred hccceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCcccceeccccccHHHHHHHHHHhCCCcccCCHHHHHHHhc
Confidence
Q ss_pred --------------------------ccc-CceeEEEc---CChhHHHhhCCCCCCCCCeEEEeccCC-CceeeccCCCC
Q 010469 243 --------------------------RLE-DDVNFYQT---TNPDVAKIFHLDSKVNRPALVMVKKET-EKISYFADGKF 291 (510)
Q Consensus 243 --------------------------~~~-~~~~f~~~---~~~~l~~~~~~~~~~~~p~l~~~~~~~-~~~~~y~~g~~ 291 (510)
.+. ..+.|+.+ .++.+++.+++.. |++++|+..+ +....| .|.+
T Consensus 351 ~~~~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~~~~~~----p~i~l~~~~~~e~~~~~-~g~~ 425 (780)
T 3apo_A 351 HHRWLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSAPGICSDLYVFQ----PSLAVFKGQGTKEYEIH-HGKK 425 (780)
T ss_dssp TSEEEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGCHHHHHHTTCCS----CEEEEEESSTTSSEEEC-CSCC
T ss_pred cCCeEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCchhhHhhccccC----ChhhhccCCCcceeeec-ccHh
Confidence 111 33556554 3556788888863 9999998876 457778 8889
Q ss_pred CHHHHHHHHHhcCCCceeecCCCchhhhccCCccceEEEEEe-c-cchhhHHHHHHHHHHhccCceEEEEEEcCCccccc
Q 010469 292 DKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAV-S-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGK 369 (510)
Q Consensus 292 ~~~~i~~fi~~~~~p~~~~lt~~~~~~~~~~~~~~~~v~~~~-~-~~~~~~~~~~~~~A~~~~~~~~f~~vd~~~~~~~~ 369 (510)
+.++|.+|+..+..|.+.+++.+++..+ .+. .+++.|.. . ..|....+.+.++|+++++++.|+.+|++. ..
T Consensus 426 ~~~~i~~f~~~~~~~~v~~l~~~~~~~~--~~~-~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~---~~ 499 (780)
T 3apo_A 426 ILYDILAFAKESVNSHVTTLGPQNFPAS--DKE-PWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTI---HE 499 (780)
T ss_dssp CHHHHHHHHHHHHTSCEEECCTTTSCTT--CCS-CEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CH
T ss_pred hHHHHHHHhhhccCCCCEecCHHHHHHc--CCC-eEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCC---CH
Confidence 9999999999999999999999999888 333 44444444 2 678999999999999999999999999876 44
Q ss_pred chhhhcCCCCCCCcEEEEeeCCCCCcccCCCCCCHHHHHHHHHHhhcCcccccccCCCCCCCCCCceEEEeCcchhhHhh
Q 010469 370 PVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVL 449 (510)
Q Consensus 370 ~l~~~~gi~~~~~P~~~i~~~~~~~~y~~~~~~t~e~i~~Fi~~~~~Gkl~~~~kSe~~p~~~~~~~~~l~~~~f~~~v~ 449 (510)
.+++.||+.. .|+++++.. +..+.+.|..+.+.|.+|++++++ +.+..+++++|++.+.
T Consensus 500 ~~~~~~~v~~--~Pt~~~~~~--g~~~~~~g~~~~~~l~~fi~~~~~-----------------~~v~~l~~~~f~~~v~ 558 (780)
T 3apo_A 500 GLCNMYNIQA--YPTTVVFNQ--SSIHEYEGHHSAEQILEFIEDLRN-----------------PSVVSLTPSTFNELVK 558 (780)
T ss_dssp HHHHHTTCCS--SSEEEEEET--TEEEEECSCSCHHHHHHHHHHHHS-----------------CSEEECCHHHHHHHTT
T ss_pred HHHHHcCCCc--CCeEEEEcC--CceeeecCcccHHHHHHHHHhhcc-----------------cceeecCcccHHHHhh
Confidence 7899999976 699888854 345778899999999999999986 2467789999999987
Q ss_pred cc--CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCcc
Q 010469 450 DE--SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHR 501 (510)
Q Consensus 450 ~~--~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~ 501 (510)
.. +..++|.||+|||++|+.+.|.|.++|+.+++ ++.|+.+|++.|...+
T Consensus 559 ~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~--~v~~~~vd~~~~~~l~ 610 (780)
T 3apo_A 559 QRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTG--LINVGSVDCGQYHSFC 610 (780)
T ss_dssp TCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTTHHHH
T ss_pred ccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--CeEEEEEECcchHHHH
Confidence 64 45789999999999999999999999999987 7999999999876543
No 7
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=100.00 E-value=2.3e-39 Score=319.44 Aligned_cols=297 Identities=35% Similarity=0.625 Sum_probs=266.0
Q ss_pred HHcCCCcccccchhHHHHhccCCCeEEEEEecCCCCcchHHHHHhccccCceeEEEcCChhHHHhhCCCCCCCCCeEEEe
Q 010469 197 KKIGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADASRLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVMV 276 (510)
Q Consensus 197 ~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~~~~~~~p~l~~~ 276 (510)
....+.+..|++.+++++++..++.++|+||.+.+......|.++|....++.|+.+.+.+++++++++. |++++|
T Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~~~~f~~~A~~~~~~~F~~t~~~~v~~~~~v~~----~~i~lf 88 (361)
T 3uem_A 13 GPGSEFATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAIDDIPFGITSNSDVFSKYQLDK----DGVVLF 88 (361)
T ss_dssp CCCCSSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHHHHHHHHHHHHCSSSCEEEECCHHHHHHTTCSS----SEEEEE
T ss_pred CCccccceecCCHHHHHHHHhcCCcEEEEEEcCCCchHHHHHHHHHhcCCCceEEEECcHHHHHHhCCCC----CeEEEE
Confidence 3345668889999999999999999999999988888889999988555899999999999999999975 999999
Q ss_pred ccCCCceeeccCCCCCHHHHHHHHHhcCCCceeecCCCchhhhccCCccceEEEEEec--cchhhHHHHHHHHHHhccCc
Q 010469 277 KKETEKISYFADGKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKGK 354 (510)
Q Consensus 277 ~~~~~~~~~y~~g~~~~~~i~~fi~~~~~p~~~~lt~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~A~~~~~~ 354 (510)
+..++....| +|+++.++|.+||..++.|++.+++.+++..++.++.+.++++|... .+++.+.+.|+++|++|+++
T Consensus 89 k~f~~~~~~~-~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~ 167 (361)
T 3uem_A 89 KKFDEGRNNF-EGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK 167 (361)
T ss_dssp ESSTTSEEEC-CSCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT
T ss_pred EecCCCcccc-CCcCCHHHHHHHHHHcCCCcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc
Confidence 9877788899 99999999999999999999999999999999988877777777764 67999999999999999999
Q ss_pred eEEEEEEcCCcccccchhhhcCCCCCCCcEEEEeeCC-CCCcccCC-CCCCHHHHHHHHHHhhcCcccccccCCCCCCCC
Q 010469 355 LIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGND-DAKKHILD-GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETN 432 (510)
Q Consensus 355 ~~f~~vd~~~~~~~~~l~~~~gi~~~~~P~~~i~~~~-~~~~y~~~-~~~t~e~i~~Fi~~~~~Gkl~~~~kSe~~p~~~ 432 (510)
+.|+++|++... ...+++.||+...+.|++++++.+ ...+|.+. +.++.+.|.+|++++++|+++|.++|+++|+.+
T Consensus 168 i~f~~vd~~~~~-~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~ 246 (361)
T 3uem_A 168 ILFIFIDSDHTD-NQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDW 246 (361)
T ss_dssp CEEEEECTTSGG-GHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTT
T ss_pred eEEEEecCChHH-HHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCccc
Confidence 999999987433 557899999987778999998763 45677765 689999999999999999999999999999874
Q ss_pred -CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcC
Q 010469 433 -DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH 499 (510)
Q Consensus 433 -~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~ 499 (510)
.+.+..+++.+|++.+.+.+++++|+||||||++|+.+.|.+.++++.+++..++.++.+|++.|+.
T Consensus 247 ~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~~ 314 (361)
T 3uem_A 247 DKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV 314 (361)
T ss_dssp TTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCBC
T ss_pred ccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccch
Confidence 7889999999999999888899999999999999999999999999999875679999999999984
No 8
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.98 E-value=2.7e-30 Score=279.78 Aligned_cols=371 Identities=17% Similarity=0.276 Sum_probs=297.2
Q ss_pred CcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEE
Q 010469 94 DVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYF 173 (510)
Q Consensus 94 ~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~ 173 (510)
.+..+|.++|+..+. +++++|.|++.-|. ....+.+.+++..+++ ..+.|+.+||..++.+|+++++.. |++++
T Consensus 336 ~v~~it~~~f~~~~~-~~~~lv~F~~~~~~--~~~~~~~~~~A~~~~~--~~i~f~~~D~~~~~~~~~~~~~~~-p~i~l 409 (780)
T 3apo_A 336 DFELLSANQLEDRLA-HHRWLVFFHFGKNE--NANDPELKKLKTLLKN--EHIQVVRFDCSSAPGICSDLYVFQ-PSLAV 409 (780)
T ss_dssp CCCEECHHHHHHHHT-TSEEEEEEECC-------CCGGGGGHHHHHGG--GTEEEEEEEGGGCHHHHHHTTCCS-CEEEE
T ss_pred CcccCCHHHHHHHhc-cCCeEEEEecCCcc--ccchHHHHHHHHhhcc--CceeEEEEeCCCchhhHhhccccC-Chhhh
Confidence 456788888887544 36999999987653 3356889999998875 369999999999999999999986 99999
Q ss_pred EeCCe---eeeecCCCCHHHHHHHHHHHcCCCcccccchhHHHHhccCCCeEEEEEecCCCCc---chHHHHHhc-cccC
Q 010469 174 FVDGQ---HKAYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGS---ESEVLADAS-RLED 246 (510)
Q Consensus 174 ~~~g~---~~~y~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~-~~~~ 246 (510)
|+.+. ...|.|..+.+.|.+|+.....+.+..++. +.+..+ ....++|.|+.+++.. ....+.+++ .+.+
T Consensus 410 ~~~~~~e~~~~~~g~~~~~~i~~f~~~~~~~~v~~l~~-~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~ 486 (780)
T 3apo_A 410 FKGQGTKEYEIHHGKKILYDILAFAKESVNSHVTTLGP-QNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYG 486 (780)
T ss_dssp EESSTTSSEEECCSCCCHHHHHHHHHHHHTSCEEECCT-TTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT
T ss_pred ccCCCcceeeecccHhhHHHHHHHhhhccCCCCEecCH-HHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC
Confidence 98642 667899999999999999999888888765 556555 5566777888777764 334556666 5667
Q ss_pred ceeEEEc---CChhHHHhhCCCCCCCCCeEEEeccCCCceeeccCCCCCHHHHHHHHHhcCCCceeecCCCchhhhccCC
Q 010469 247 DVNFYQT---TNPDVAKIFHLDSKVNRPALVMVKKETEKISYFADGKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESP 323 (510)
Q Consensus 247 ~~~f~~~---~~~~l~~~~~~~~~~~~p~l~~~~~~~~~~~~y~~g~~~~~~i~~fi~~~~~p~~~~lt~~~~~~~~~~~ 323 (510)
++.|+.+ ....+++.|++.. .|++++++.+ ....| .|..+.++|.+|+....-|.+..++.+++..+....
T Consensus 487 ~v~~~~vd~~~~~~~~~~~~v~~---~Pt~~~~~~g--~~~~~-~g~~~~~~l~~fi~~~~~~~v~~l~~~~f~~~v~~~ 560 (780)
T 3apo_A 487 QLKVGTLDCTIHEGLCNMYNIQA---YPTTVVFNQS--SIHEY-EGHHSAEQILEFIEDLRNPSVVSLTPSTFNELVKQR 560 (780)
T ss_dssp TCEEEEEETTTCHHHHHHTTCCS---SSEEEEEETT--EEEEE-CSCSCHHHHHHHHHHHHSCSEEECCHHHHHHHTTTC
T ss_pred CeEEEEEeCCCCHHHHHHcCCCc---CCeEEEEcCC--ceeee-cCcccHHHHHHHHHhhcccceeecCcccHHHHhhcc
Confidence 8888876 3567999999987 8999999653 34678 899999999999999988999999999998876553
Q ss_pred --ccceEEEEEec--cchhhHHHHHHHHHHhccCceEEEEEEcCCcccccchhhhcCCCCCCCcEEEEeeCCCC---Ccc
Q 010469 324 --IKNQLLLFAVS--NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDA---KKH 396 (510)
Q Consensus 324 --~~~~~v~~~~~--~~~~~~~~~~~~~A~~~~~~~~f~~vd~~~~~~~~~l~~~~gi~~~~~P~~~i~~~~~~---~~y 396 (510)
....++.|+.. ..|+.+.+.|.++|+++++++.|+.+|+.. ...+++.+++.. .|+++++..+.. ...
T Consensus 561 ~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~~---~~~l~~~~~v~~--~Pti~~~~~~~~~~~~~~ 635 (780)
T 3apo_A 561 KHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQ---YHSFCTQENVQR--YPEIRFYPQKSSKAYQYH 635 (780)
T ss_dssp CTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTT---THHHHHHTTCCS--SSEEEEECCCSSSCCSCE
T ss_pred CCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCeEEEEEECcc---hHHHHHHcCCCC--CCeEEEEcCCCcCccchh
Confidence 23445656554 568899999999999999999999999876 457888999976 599988866543 234
Q ss_pred cCCC-CCCHHHHHHHHHHhhcCcccccccCCCCCCCCCCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHH
Q 010469 397 ILDG-ELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYN 475 (510)
Q Consensus 397 ~~~~-~~t~e~i~~Fi~~~~~Gkl~~~~kSe~~p~~~~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~ 475 (510)
.+.| ..+.++|.+|+.+... +.+..+++++|.+.+.+.+++++|.|||+||++|+.+.|.+.
T Consensus 636 ~y~g~~~~~~~l~~fi~~~~~-----------------~~v~~l~~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~ 698 (780)
T 3apo_A 636 SYNGWNRDAYSLRSWGLGFLP-----------------QASIDLTPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFE 698 (780)
T ss_dssp ECCCSCCSHHHHHHHHHTTSC-----------------CCSEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHH
T ss_pred hcCCCCCCHHHHHHHHhhhcc-----------------cccccCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHH
Confidence 4788 8999999999998652 236779999999888888899999999999999999999999
Q ss_pred HHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 476 KLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 476 ~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
++++.+++ ++.|+.+|++.+......
T Consensus 699 ~la~~~~~--~~~~~~vd~~~~~~~~~~ 724 (780)
T 3apo_A 699 LLARMIKG--KVRAGKVDCQAYPQTCQK 724 (780)
T ss_dssp HHHHHHTT--TCEEEEEETTTCHHHHHH
T ss_pred HHHHHhcC--CceEEEEECCCCHHHHHh
Confidence 99999976 799999999887654443
No 9
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.1e-30 Score=244.41 Aligned_cols=220 Identities=25% Similarity=0.500 Sum_probs=189.3
Q ss_pred CCCCcEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc--ccHHHHHhCCCCc
Q 010469 91 DDKDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT--EENELAHEYDVQG 167 (510)
Q Consensus 91 ~~~~v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~ 167 (510)
....|++|+.++|++.+ ..+++++|+|||+||++|+++.|.|+++++.+++ .+.++.|||+ +++++|++|+|.+
T Consensus 15 ~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~---~~~~~~v~~d~~~~~~l~~~~~I~~ 91 (298)
T 3ed3_A 15 SDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG---VVQVAAVNCDLNKNKALCAKYDVNG 91 (298)
T ss_dssp SCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTSTTTHHHHHHTTCCB
T ss_pred CCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC---CcEEEEEEccCccCHHHHHhCCCCc
Confidence 44579999999999988 4578999999999999999999999999999977 5899999998 6889999999999
Q ss_pred ccEEEEEeCCe------------------eeeecCCCCHHHHHHHHHHHcCCCcccccchhHHHHhccCCCeEEEEEecC
Q 010469 168 FPTIYFFVDGQ------------------HKAYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLNS 229 (510)
Q Consensus 168 ~P~~~~~~~g~------------------~~~y~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~~~~ 229 (510)
+||+++|++|+ ...|.|.++.+.|.+|+.+.+++.+..+.+.+++++++..++...+++|..
T Consensus 92 ~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~fs~ 171 (298)
T 3ed3_A 92 FPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLFSK 171 (298)
T ss_dssp SSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEEES
T ss_pred cceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEEcC
Confidence 99999999885 578999999999999999999999999999999999998866666666644
Q ss_pred CCCcchHHHHHhc-cccCceeEEEcCChhHHHhhCC-----CC---------------CCCCCeEEEeccCCCceeeccC
Q 010469 230 LVGSESEVLADAS-RLEDDVNFYQTTNPDVAKIFHL-----DS---------------KVNRPALVMVKKETEKISYFAD 288 (510)
Q Consensus 230 ~~~~~~~~~~~~~-~~~~~~~f~~~~~~~l~~~~~~-----~~---------------~~~~p~l~~~~~~~~~~~~y~~ 288 (510)
.......|..+| .+++.+.|+.+.+.+++..+++ +. ....|+|++|+..++.+..| .
T Consensus 172 -~~~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y-~ 249 (298)
T 3ed3_A 172 -QDKISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEY-E 249 (298)
T ss_dssp -SSSCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEEC-C
T ss_pred -CCcchHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEe-c
Confidence 455678888887 6889999999988877644421 10 02479999999988899999 6
Q ss_pred -CCCCHHHHHHHHH--hcCCCceeecCCCc
Q 010469 289 -GKFDKSTIADFVF--SNKLPLVTIFTREN 315 (510)
Q Consensus 289 -g~~~~~~i~~fi~--~~~~p~~~~lt~~~ 315 (510)
+.++.++|.+||. .+..|.++++|..+
T Consensus 250 g~~~~~~~i~~fi~~~~~~~p~~~~ls~~~ 279 (298)
T 3ed3_A 250 GNSINKNDISKFLRDTFSITPNEGPFSRRS 279 (298)
T ss_dssp CSSCCHHHHHHHHHHHHTCCCSSSTTSHHH
T ss_pred cccCCHHHHHHHHHhhcCCCCCcCCCchHH
Confidence 5789999999999 88999999998855
No 10
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.96 E-value=4.2e-28 Score=225.23 Aligned_cols=228 Identities=24% Similarity=0.382 Sum_probs=179.5
Q ss_pred HcCCCcccccchhHHHHhccC-CCeEEEEEecCCCCcchHHHHHhc-cccCceeEEEcCChhHHHhhCCCCCCCCCeEEE
Q 010469 198 KIGPGIYNITTLDEAERVLTS-ETKVVLGYLNSLVGSESEVLADAS-RLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVM 275 (510)
Q Consensus 198 ~~~~~~~~i~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~f~~~~~~~l~~~~~~~~~~~~p~l~~ 275 (510)
+.+|++..|++.++++++++. +++++|+||.+.++.....|.++| .+++++.|+.+.+++++++++++. |+|++
T Consensus 3 ~~gP~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t~~~~v~~~~~v~~----p~ivl 78 (250)
T 3ec3_A 3 LGSPPSKEILTLKQVQEFLKDGDDVVILGVFQGVGDPGYLQYQDAANTLREDYKFHHTFSTEIAKFLKVSL----GKLVL 78 (250)
T ss_dssp --CCSSEECCCHHHHHHHHHHCSSCEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEECCHHHHHHHTCCS----SEEEE
T ss_pred CCCCCceecCCHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEECcHHHHHHcCCCC----CeEEE
Confidence 467899999999999999998 999999999988888999999988 678999999999999999999975 99999
Q ss_pred eccC------CCceeeccC--CCCCHHHHHHHHHhcCCCceeecCCCchhhhccCCccceEEEEEec------cchhhHH
Q 010469 276 VKKE------TEKISYFAD--GKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS------NDSEKLL 341 (510)
Q Consensus 276 ~~~~------~~~~~~y~~--g~~~~~~i~~fi~~~~~p~~~~lt~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~ 341 (510)
|++. ++....| . +.++.++|.+||..+++|++.++|.+|...++. +.+.+++++..+ ...+.++
T Consensus 79 fk~~~~~~kfde~~~~y-~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~~ 156 (250)
T 3ec3_A 79 MQPEKFQSKYEPRMHVM-DVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRYS-KRPLVVVYYSVDFSFDYRTATQFWR 156 (250)
T ss_dssp ECCGGGCCTTSCSCEEE-ECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHSC-SSSEEEEEECCCCSTTTHHHHHHHH
T ss_pred Eecchhhccccccceec-cCCCCCCHHHHHHHHHHcCCCceeecCccchhhhhc-cCccEEEEEecccccccchhHHHHH
Confidence 9963 4556778 6 578999999999999999999999999998884 444444333211 2345689
Q ss_pred HHHHHHHHhccCceEEEEEEcCCcccccchhhhcCCCCCC-CcEEEEeeCCCCCcccCC-CCCCHHHHHHHHHHhhcCcc
Q 010469 342 PVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA-PKVLAYTGNDDAKKHILD-GELTLDKIKTFGEDFLEGKL 419 (510)
Q Consensus 342 ~~~~~~A~~~~~~~~f~~vd~~~~~~~~~l~~~~gi~~~~-~P~~~i~~~~~~~~y~~~-~~~t~e~i~~Fi~~~~~Gkl 419 (510)
..++++|++|+ ++.|+|+|+.. ....++.||++..+ +|.+++++ ..+.+|.+. ++++.++|.+|++++++|++
T Consensus 157 ~~~~~vAk~~k-ki~F~~~d~~~---~~~~l~~fgl~~~~~~p~~~~~~-~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gkl 231 (250)
T 3ec3_A 157 NKVLEVAKDFP-EYTFAIADEED---YATEVKDLGLSESGGDVNAAILD-ESGKKFAMEPEEFDSDALREFVMAFKKGKL 231 (250)
T ss_dssp HHHHHHHTTCT-TSEEEEEETTT---THHHHHHTTCSSCSCSCEEEEEC-TTSCEEECCCCSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhhc-ceeEEEEcHHH---HHHHHHHcCCCccCCCcEEEEEc-CCCceecCCcccCCHHHHHHHHHHHHCCCc
Confidence 99999999999 99999999765 33467899998654 45666665 456889887 68999999999999999999
Q ss_pred cccccCCCCCCCCCCce
Q 010469 420 KPFFKSDPIPETNDGDV 436 (510)
Q Consensus 420 ~~~~kSe~~p~~~~~~~ 436 (510)
+|++||||+|+.++++|
T Consensus 232 ~p~~kSepiPe~~~~pV 248 (250)
T 3ec3_A 232 KPVIKSQPVPKNNKGAA 248 (250)
T ss_dssp CCCC-------------
T ss_pred cceeecCCCCCCCCCCC
Confidence 99999999999877665
No 11
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.96 E-value=3.8e-28 Score=226.04 Aligned_cols=231 Identities=19% Similarity=0.346 Sum_probs=180.1
Q ss_pred HHcCCCcccccchhHHHHhccCCCeEEEEEecCCCCcchHHHHHhc-cccCceeEEEcCChhHHHhhCCCCCCCCCeEEE
Q 010469 197 KKIGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADAS-RLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVM 275 (510)
Q Consensus 197 ~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~f~~~~~~~l~~~~~~~~~~~~p~l~~ 275 (510)
++.+|++..|++.+++++++..+++.+|+||.+.+......|.++| .+++++.|+.+.+++++++++++. |+|++
T Consensus 2 ~~~gP~v~~l~s~~~~~~~l~~~~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~~~~~v~~~~~~~~----p~i~~ 77 (252)
T 2h8l_A 2 PLGSPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTNVESLVNEYDDNG----EGIIL 77 (252)
T ss_dssp ----CCEEECCSHHHHHHHHTSSSCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEECCHHHHHHHCSSS----EEEEE
T ss_pred CcCCCCceeecCHHHHHHHhhcCCeEEEEEECCCCChHHHHHHHHHHhcccCcEEEEEChHHHHHHhCCCC----CcEEE
Confidence 4678899999999999999999999999999988888889999887 678999999999999999999984 99999
Q ss_pred eccC------CCceeeccCCCCCHHHHHHHHHhcCCCceeecCCCchhhhccCCccceEEEEEec-c----chhhHHHHH
Q 010469 276 VKKE------TEKISYFADGKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS-N----DSEKLLPVF 344 (510)
Q Consensus 276 ~~~~------~~~~~~y~~g~~~~~~i~~fi~~~~~p~~~~lt~~~~~~~~~~~~~~~~v~~~~~-~----~~~~~~~~~ 344 (510)
|++. ++....|+.|.++.++|.+||..+++|+++++|.+|...++.. +.+++++... . ..+.++..+
T Consensus 78 fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~ 155 (252)
T 2h8l_A 78 FRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGK--DLLIAYYDVDYEKNAKGSNYWRNRV 155 (252)
T ss_dssp ECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHHSSS--SEEEEEECCBTTTBHHHHHHHHHHH
T ss_pred EcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhhcCC--CeEEEEeecchhhcchhHHHHHHHH
Confidence 9962 3456667456789999999999999999999999999998544 3444333222 1 134688899
Q ss_pred HHHHHhccCc---eEEEEEEcCCcccccchhhhcCC--CCCCCcEEEEeeCCCCCcccCCCCCCHHH--HHHHHHHhhcC
Q 010469 345 EEAAKSFKGK---LIFVYVQMDNEDVGKPVSEYFGI--TGEAPKVLAYTGNDDAKKHILDGELTLDK--IKTFGEDFLEG 417 (510)
Q Consensus 345 ~~~A~~~~~~---~~f~~vd~~~~~~~~~l~~~~gi--~~~~~P~~~i~~~~~~~~y~~~~~~t~e~--i~~Fi~~~~~G 417 (510)
+++|++|+++ +.|+|+|+.. ...+++.||+ +..+.|.+++.+. .+.+|.+.++++.++ |.+|++++++|
T Consensus 156 ~~vA~~~~~k~~~~~F~~~d~~~---~~~~~~~fgl~~~~~~~P~v~i~~~-~~~ky~~~~~~t~~~~~i~~F~~~~~~G 231 (252)
T 2h8l_A 156 MMVAKKFLDAGHKLNFAVASRKT---FSHELSDFGLESTAGEIPVVAIRTA-KGEKFVMQEEFSRDGKALERFLQDYFDG 231 (252)
T ss_dssp HHHHHHHHHTTCCCEEEEEETTT---THHHHGGGTCCCCSCSSCEEEEECT-TSCEEECCSCCCTTSHHHHHHHHHHHHT
T ss_pred HHHHHHccccCceEEEEEEchHH---HHHHHHHcCCCCccCCCCEEEEEeC-cCcEecCCcccCcchHHHHHHHHHHHCC
Confidence 9999999987 9999999865 3357899999 5578999999865 567898888899999 99999999999
Q ss_pred cccccccCCCCCCCCCCceE
Q 010469 418 KLKPFFKSDPIPETNDGDVK 437 (510)
Q Consensus 418 kl~~~~kSe~~p~~~~~~~~ 437 (510)
+++|+++||++|+.++++|+
T Consensus 232 kl~~~~kSe~iPe~~~~pV~ 251 (252)
T 2h8l_A 232 NLKRYLKSEPIPESNDGAAA 251 (252)
T ss_dssp CSCCCC--------------
T ss_pred CccccccCCCCCCCCCCCCC
Confidence 99999999999998777764
No 12
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.95 E-value=3.8e-26 Score=211.79 Aligned_cols=211 Identities=29% Similarity=0.577 Sum_probs=177.6
Q ss_pred CCCCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccE
Q 010469 91 DDKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (510)
Q Consensus 91 ~~~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~ 170 (510)
..+.|..|++++|++.+.++++++|+|||+||++|+++.|.|.++++.+++.+..+.++.|||++++++|++|+|.++||
T Consensus 13 ~~~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt 92 (241)
T 3idv_A 13 EENGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPT 92 (241)
T ss_dssp EETTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSE
T ss_pred cCCCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCE
Confidence 34679999999999999999999999999999999999999999999998855569999999999999999999999999
Q ss_pred EEEEeCCeeeeecCCCCHHHHHHHHHHHcCCC------cccccchhHHHHhccCCCeEEEEEecCCCCcc---hHHHHHh
Q 010469 171 IYFFVDGQHKAYNGGRTKDAIVTWIKKKIGPG------IYNITTLDEAERVLTSETKVVLGYLNSLVGSE---SEVLADA 241 (510)
Q Consensus 171 ~~~~~~g~~~~y~g~~~~~~l~~~i~~~~~~~------~~~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~ 241 (510)
+++|++|....|.|.++.+.+.+|+.+.+.+. .....+.+++++++...+.++|.|+..++... ...+..+
T Consensus 93 ~~~~~~g~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~ 172 (241)
T 3idv_A 93 IKILKKGQAVDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKA 172 (241)
T ss_dssp EEEEETTEEEECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHH
T ss_pred EEEEcCCCcccccCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHH
Confidence 99999997778999999999999999988653 23334557888888888888888888887653 3455555
Q ss_pred c-cccC---ceeEEEc---CChhHHHhhCCCCCCCCCeEEEeccCCCceeeccCCCCCHHHHHHHHHhcCCCc
Q 010469 242 S-RLED---DVNFYQT---TNPDVAKIFHLDSKVNRPALVMVKKETEKISYFADGKFDKSTIADFVFSNKLPL 307 (510)
Q Consensus 242 ~-~~~~---~~~f~~~---~~~~l~~~~~~~~~~~~p~l~~~~~~~~~~~~y~~g~~~~~~i~~fi~~~~~p~ 307 (510)
+ .+.. .+.|+.+ .+.+++++|++.. .|++++|+.+ ....| .|..+.++|.+||..+.-|.
T Consensus 173 a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~~~~g--~~~~~-~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 173 AKELSKRSPPIPLAKVDATAETDLAKRFDVSG---YPTLKIFRKG--RPYDY-NGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp HHHHHTSSSCCCEEEEETTTCHHHHHHTTCCS---SSEEEEEETT--EEEEC-CSCCSHHHHHHHHHHHTTCT
T ss_pred HHHHhccCCcEEEEEEECCCCHHHHHHcCCcc---cCEEEEEECC--eEEEe-cCCCCHHHHHHHHHhhhCCC
Confidence 5 3433 3777765 4678999999986 8999999864 45668 99999999999999887654
No 13
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.93 E-value=8.1e-25 Score=200.19 Aligned_cols=212 Identities=20% Similarity=0.342 Sum_probs=186.1
Q ss_pred CCcccccchhHHHHhccCCCeEEEEEecCCCCcchHHHHHhccccCceeEEEcCChhHHHhhCCCCCCCCCeEEEeccCC
Q 010469 201 PGIYNITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADASRLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVMVKKET 280 (510)
Q Consensus 201 ~~~~~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~~~~~~~p~l~~~~~~~ 280 (510)
..+.+|.+.+++++++..+++++|+||.+.+......|.++|....++.|+.+.+++++++++++. |+|++|++.+
T Consensus 9 ~~~~~l~s~~~~~~~l~~~~v~vVgff~~~~~~~~~~f~~~A~~l~~~~F~~t~~~~v~~~~~v~~----p~i~lfk~~~ 84 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNITG----NTICLFRLVD 84 (227)
T ss_dssp CCCEECCSHHHHHHHHHTSSEEEEEECSCSCSTHHHHHHHHTTTCTTSEEEEECCHHHHHHTTCCS----SEEEEEETTT
T ss_pred CCCeeeCCHHHHHHHHhcCCeEEEEEecCCCchhHHHHHHHHHhCCCceEEEECCHHHHHHcCCCC----CeEEEEEecC
Confidence 347788999999999999999999999998899999999998544699999999999999999974 9999999877
Q ss_pred CceeeccC----CCCCHHHHHHHHHhcCCCceeecCCCchhhhccCCccceEEEEEec--cchhhHHHHHHHHHHhccCc
Q 010469 281 EKISYFAD----GKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKGK 354 (510)
Q Consensus 281 ~~~~~y~~----g~~~~~~i~~fi~~~~~p~~~~lt~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~A~~~~~~ 354 (510)
+....| . |.++.+.|.+||..++.|++.++|.+|+..++..+.+.++++|.+. .+++.+.+.++++|++|+++
T Consensus 85 ~~~~~~-~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~ 163 (227)
T 4f9z_D 85 NEQLNL-EDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK 163 (227)
T ss_dssp TEEEEE-CHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT
T ss_pred cccccc-cccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC
Confidence 677788 6 4789999999999999999999999999999988888888778664 56888999999999999999
Q ss_pred eEEEEEEcCCcccccchhhhcCCCCCCCcEEEEeeCCCCCcccCC-CCCCHHHHHHHHHHhhcCc
Q 010469 355 LIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILD-GELTLDKIKTFGEDFLEGK 418 (510)
Q Consensus 355 ~~f~~vd~~~~~~~~~l~~~~gi~~~~~P~~~i~~~~~~~~y~~~-~~~t~e~i~~Fi~~~~~Gk 418 (510)
+.|+|+|+.... ...+++.||++..+.|++++++..+..+|.+. ++++.++|.+|++++++||
T Consensus 164 i~F~~vd~~~~~-~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 164 ILFILVDSGMKE-NGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp CEEEEEETTSGG-GHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTTC
T ss_pred EEEEEeCCccHh-HHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCCC
Confidence 999999987544 33567999998777899999987766778764 6899999999999999996
No 14
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.89 E-value=1.5e-21 Score=180.78 Aligned_cols=205 Identities=18% Similarity=0.301 Sum_probs=147.5
Q ss_pred CCCcEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeC--cccHHHHHhCCCCcc
Q 010469 92 DKDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA--TEENELAHEYDVQGF 168 (510)
Q Consensus 92 ~~~v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~--~~~~~~~~~~~v~~~ 168 (510)
...|..|++++|+..+ ..+++++|+|||+||++|+++.|.|+++++.+++.+..+.++.||| ++++++|++|+|.++
T Consensus 11 ~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~ 90 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGF 90 (244)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSS
T ss_pred CCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCcc
Confidence 4569999999999877 4569999999999999999999999999999987555799999999 678999999999999
Q ss_pred cEEEEEeCC------eeeeecCCCCHHHHHHHHHHHcCCCcc---------cccchhHHHHhccCCC-eEEEEEecCCCC
Q 010469 169 PTIYFFVDG------QHKAYNGGRTKDAIVTWIKKKIGPGIY---------NITTLDEAERVLTSET-KVVLGYLNSLVG 232 (510)
Q Consensus 169 P~~~~~~~g------~~~~y~g~~~~~~l~~~i~~~~~~~~~---------~i~~~~~~~~~~~~~~-~~~v~~~~~~~~ 232 (510)
||+++|++| ....+.| .+.+.+.++|.+.+..... ...+.+++..++..+. ..++++|.+...
T Consensus 91 Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~~~ 169 (244)
T 3q6o_A 91 PTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXGGS 169 (244)
T ss_dssp SEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECTTC
T ss_pred CEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEECCc
Confidence 999999874 3345666 7999999999998754332 3345578888875432 333344444332
Q ss_pred cchHHHHHhccccCceeEEEcCC--hhHHHhhCCCCCCCCCeEEEeccCCCceeeccCCCCCHHHHHHHHH
Q 010469 233 SESEVLADASRLEDDVNFYQTTN--PDVAKIFHLDSKVNRPALVMVKKETEKISYFADGKFDKSTIADFVF 301 (510)
Q Consensus 233 ~~~~~~~~~~~~~~~~~f~~~~~--~~l~~~~~~~~~~~~p~l~~~~~~~~~~~~y~~g~~~~~~i~~fi~ 301 (510)
.....+.........+.+..+.+ ..++++||++. .|+++++..++ +...++...-+.+.+..+++
T Consensus 170 ~~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~~---~Pslvl~~~~g-~~~~~~~~~~~r~~~~~~l~ 236 (244)
T 3q6o_A 170 YLAREVALDLSQHKGVAVRRVLNTEANVVRKFGVTD---FPSCYLLFRNG-SVSRVPVLMESRSFYTAYLQ 236 (244)
T ss_dssp CHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCC---SSEEEEEETTS-CEEECCCSSSSHHHHHHHHH
T ss_pred chHHHHHHHhccCCceEEEEEeCchHHHHHHcCCCC---CCeEEEEeCCC-CeEeeccccccHHHHHHHHH
Confidence 22222111112234456665544 89999999996 89999998765 55555223333455555554
No 15
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.85 E-value=5.9e-21 Score=151.22 Aligned_cols=95 Identities=29% Similarity=0.710 Sum_probs=84.5
Q ss_pred ChhcHHHHHh--CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEEeC
Q 010469 99 KERNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVD 176 (510)
Q Consensus 99 ~~~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~~ 176 (510)
+.++|++.+. ++++++|+|||+||+||+.+.|.|+++++.+.+ +.|+.||++++++++++|+|+++||+++|++
T Consensus 7 ~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~----~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~ 82 (105)
T 3zzx_A 7 DQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD----VVFLKVDVDECEDIAQDNQIACMPTFLFMKN 82 (105)
T ss_dssp SHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----EEEEEEETTTCHHHHHHTTCCBSSEEEEEET
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC----eEEEEEecccCHHHHHHcCCCeecEEEEEEC
Confidence 4578998774 468999999999999999999999999988754 8999999999999999999999999999999
Q ss_pred Cee-eeecCCCCHHHHHHHHHHH
Q 010469 177 GQH-KAYNGGRTKDAIVTWIKKK 198 (510)
Q Consensus 177 g~~-~~y~g~~~~~~l~~~i~~~ 198 (510)
|+. .++.| .+.+.|.+||+++
T Consensus 83 G~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 83 GQKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp TEEEEEEES-CCHHHHHHHHHHH
T ss_pred CEEEEEEeC-cCHHHHHHHHHhc
Confidence 954 57778 5889999999874
No 16
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.85 E-value=1.6e-20 Score=158.24 Aligned_cols=116 Identities=39% Similarity=0.775 Sum_probs=106.1
Q ss_pred cCCCCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCccc
Q 010469 90 IDDKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFP 169 (510)
Q Consensus 90 ~~~~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 169 (510)
.....+..+++++|++.+.++++++|+||++||++|+++.|.|.++++.+++.+..+.++.||++++++++++|+|.++|
T Consensus 14 ~~~~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 93 (140)
T 2dj1_A 14 KEENGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYP 93 (140)
T ss_dssp EEETTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSS
T ss_pred CCCCCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccC
Confidence 34567999999999999988999999999999999999999999999999875456999999999999999999999999
Q ss_pred EEEEEeCCeeeeecCCCCHHHHHHHHHHHcCCCccc
Q 010469 170 TIYFFVDGQHKAYNGGRTKDAIVTWIKKKIGPGIYN 205 (510)
Q Consensus 170 ~~~~~~~g~~~~y~g~~~~~~l~~~i~~~~~~~~~~ 205 (510)
++++|++|+...|.|..+.+.|.+||.+.+.+.+..
T Consensus 94 t~~~~~~G~~~~~~g~~~~~~l~~~l~~~~~~~~~~ 129 (140)
T 2dj1_A 94 TIKILKKGQAVDYDGSRTQEEIVAKVREVSQPDWTP 129 (140)
T ss_dssp EEEEEETTEEEECCSCCCHHHHHHHHHHHHSSSCCC
T ss_pred eEEEEECCcEEEcCCCCCHHHHHHHHHHhcCCCCCC
Confidence 999999998778999999999999999999776543
No 17
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.85 E-value=1.3e-20 Score=155.74 Aligned_cols=108 Identities=21% Similarity=0.412 Sum_probs=96.3
Q ss_pred CCCCcEEeChhcHHHHHh-CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhc--CCCeEEEEEeCcccHHHHHhCCCCc
Q 010469 91 DDKDVVVLKERNFSDVIE-NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSA--NESVVLAKVDATEENELAHEYDVQG 167 (510)
Q Consensus 91 ~~~~v~~l~~~~~~~~~~-~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~--~~~v~~~~vd~~~~~~~~~~~~v~~ 167 (510)
..+.|..|++++|++.+. .+++++|+|||+||++|+.+.|.|+++++.+... ..++.++.|||++++++|++|+|.+
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~ 92 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG 92 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS
T ss_pred CCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc
Confidence 345799999999999884 5899999999999999999999999999987632 2469999999999999999999999
Q ss_pred ccEEEEEeCCe---eeeecCCCCHHHHHHHHHHH
Q 010469 168 FPTIYFFVDGQ---HKAYNGGRTKDAIVTWIKKK 198 (510)
Q Consensus 168 ~P~~~~~~~g~---~~~y~g~~~~~~l~~~i~~~ 198 (510)
+||+++|++|. ...|.|.++.+.|.+||.+.
T Consensus 93 ~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 93 FPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp SSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 99999999873 26899999999999999864
No 18
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.84 E-value=4e-19 Score=180.34 Aligned_cols=207 Identities=16% Similarity=0.277 Sum_probs=148.6
Q ss_pred CCCcEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc--ccHHHHHhCCCCcc
Q 010469 92 DKDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT--EENELAHEYDVQGF 168 (510)
Q Consensus 92 ~~~v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~~ 168 (510)
...|..+++++|+..+ .++++++|+|||+||++|+++.|.|+++++++++.+..+.|+.|||+ +++++|++|+|.++
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~ 90 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGF 90 (519)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSB
T ss_pred CCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCccc
Confidence 3469999999999876 55699999999999999999999999999999875557999999995 48999999999999
Q ss_pred cEEEEEeCC-----eeeeecCCCCHHHHHHHHHHHcCCCc---------ccccchhHHHHhccCCC-eEEEEEecCCCCc
Q 010469 169 PTIYFFVDG-----QHKAYNGGRTKDAIVTWIKKKIGPGI---------YNITTLDEAERVLTSET-KVVLGYLNSLVGS 233 (510)
Q Consensus 169 P~~~~~~~g-----~~~~y~g~~~~~~l~~~i~~~~~~~~---------~~i~~~~~~~~~~~~~~-~~~v~~~~~~~~~ 233 (510)
||+++|++| ....+.|..+.+.+.++|.+.+.... ....+.++++.++..+. ..++++|.+....
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~~s~ 170 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFEREDSY 170 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECTTCC
T ss_pred CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCCchH
Confidence 999999854 23567888999999999999885432 12234578888886643 3444444443332
Q ss_pred chHHHHHhccccCceeEEEc--CChhHHHhhCCCCCCCCCeEEEeccCCCceeeccCCCCCHHHHHHHHHh
Q 010469 234 ESEVLADASRLEDDVNFYQT--TNPDVAKIFHLDSKVNRPALVMVKKETEKISYFADGKFDKSTIADFVFS 302 (510)
Q Consensus 234 ~~~~~~~~~~~~~~~~f~~~--~~~~l~~~~~~~~~~~~p~l~~~~~~~~~~~~y~~g~~~~~~i~~fi~~ 302 (510)
....+.........+.+..+ .+.++.++||++. .|+++++..++ +...++-..-...-+..++..
T Consensus 171 ~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~---~Pslvl~~~nG-k~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 171 LGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTD---FPSCYLLLRNG-SVSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp HHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCC---SSEEEEEETTS-CEEECCCSSCSHHHHHHHHTT
T ss_pred HHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCC---CCeEEEEeCCC-ceeecccccccHHHHHHHHHH
Confidence 22222221222334555544 4468999999997 89999998766 333331112223446666664
No 19
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.83 E-value=4e-20 Score=152.59 Aligned_cols=102 Identities=18% Similarity=0.276 Sum_probs=90.0
Q ss_pred cEEeC-hhcHHHHHh--CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 95 VVVLK-ERNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 95 v~~l~-~~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
+..|+ ..+|++.+. ++++++|.|||+||+||+.+.|.|+++++++.+ .+.|+.||.++.++++.+|+|+++||+
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~---~v~f~kVDVDe~~e~a~~y~V~siPT~ 99 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN---FCVIYLVDITEVPDFNTMYELYDPVSV 99 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT---TEEEEEEETTTCCTTTTTTTCCSSEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC---CcEEEEEECCCCHHHHHHcCCCCCCEE
Confidence 44444 478988663 678999999999999999999999999999976 699999999999999999999999999
Q ss_pred EEEeCCeee----------eecCCCC-HHHHHHHHHHHc
Q 010469 172 YFFVDGQHK----------AYNGGRT-KDAIVTWIKKKI 199 (510)
Q Consensus 172 ~~~~~g~~~----------~y~g~~~-~~~l~~~i~~~~ 199 (510)
++|++|+.. +..|... .+.|.++|...+
T Consensus 100 ~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 100 MFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp EEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred EEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 999999664 6889877 899999988776
No 20
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.83 E-value=7.7e-20 Score=147.47 Aligned_cols=104 Identities=27% Similarity=0.540 Sum_probs=96.8
Q ss_pred cEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEE
Q 010469 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFF 174 (510)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~ 174 (510)
+..++.++|++.+ ++++++|+||++||++|+.+.|.|.++++++++ ++.++.||++++++++++|+|.++|++++|
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 78 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD---KLKIVKIDVDENQETAGKYGVMSIPTLLVL 78 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT---TCEEEEEETTTCCSHHHHTTCCSBSEEEEE
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC---CcEEEEEECCCCHHHHHHcCCCcccEEEEE
Confidence 6789999999988 889999999999999999999999999999876 699999999999999999999999999999
Q ss_pred eCCe-eeeecCCCCHHHHHHHHHHHcCCC
Q 010469 175 VDGQ-HKAYNGGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 175 ~~g~-~~~y~g~~~~~~l~~~i~~~~~~~ 202 (510)
++|+ ..++.|..+.+.+.+|+.+.++++
T Consensus 79 ~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 79 KDGEVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred eCCEEEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 9995 468999999999999999988765
No 21
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.83 E-value=4.8e-20 Score=150.03 Aligned_cols=104 Identities=15% Similarity=0.163 Sum_probs=94.7
Q ss_pred CCcEEeChhcHHHHHhCCC-eEEEEEECCCC--hHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCccc
Q 010469 93 KDVVVLKERNFSDVIENNK-FVMVEFYAPWC--GHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFP 169 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~-~~~v~f~a~wC--~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 169 (510)
.....+++++|++.+.+++ +++|.|||+|| +||+.+.|.++++++++.+ ++.|++||.+++++++.+|+|+++|
T Consensus 15 ~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~---~v~~~KVdvDe~~~la~~ygV~siP 91 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG---RLVAAEVAAEAERGLMARFGVAVCP 91 (137)
T ss_dssp --CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT---TEEEEEECGGGHHHHHHHHTCCSSS
T ss_pred cCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC---CcEEEEEECCCCHHHHHHcCCccCC
Confidence 4567899999999886665 99999999999 9999999999999999977 7999999999999999999999999
Q ss_pred EEEEEeCCee-eeecCCCCHHHHHHHHHHHc
Q 010469 170 TIYFFVDGQH-KAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 170 ~~~~~~~g~~-~~y~g~~~~~~l~~~i~~~~ 199 (510)
|+++|++|+. .+..|..+.+.+.++|.+.+
T Consensus 92 TlilFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 92 SLAVVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEEEEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999954 68899999999999998776
No 22
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.83 E-value=1e-19 Score=146.55 Aligned_cols=105 Identities=24% Similarity=0.420 Sum_probs=97.0
Q ss_pred CCcEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 93 KDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
..+..+++++|++.+ .++++++|+||++||++|+.+.|.|.++++.+.+ ++.++.||++++++++++|+|.++|++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 80 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE---SFGFYYVDVEEEKTLFQRFSLKGVPQI 80 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTCHHHHHHTTCCSSCEE
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC---ceEEEEEECCcChhHHHhcCCCcCCEE
Confidence 358899999999988 7889999999999999999999999999999876 699999999999999999999999999
Q ss_pred EEEeCCee-eeecCCCCHHHHHHHHHHHcC
Q 010469 172 YFFVDGQH-KAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 172 ~~~~~g~~-~~y~g~~~~~~l~~~i~~~~~ 200 (510)
++|++|+. .++.|..+.+.+.+||.+.++
T Consensus 81 ~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 81 LYFKDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEEETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 99999954 589999999999999998763
No 23
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.82 E-value=1.4e-19 Score=145.09 Aligned_cols=104 Identities=32% Similarity=0.642 Sum_probs=97.2
Q ss_pred CCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEE
Q 010469 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~ 172 (510)
+.+..+++++|++.+.++++++|+||++||++|+.+.|.|.++++.+++ ++.++.||++++++++++|+|.++|+++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~i~~~Pt~~ 80 (109)
T 3tco_A 4 DVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG---KAVFGRLNVDENQKIADKYSVLNIPTTL 80 (109)
T ss_dssp CCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC---CceEEEEccccCHHHHHhcCcccCCEEE
Confidence 4688999999999998899999999999999999999999999999876 6999999999999999999999999999
Q ss_pred EEeCC-eeeeecCCCCHHHHHHHHHHHc
Q 010469 173 FFVDG-QHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 173 ~~~~g-~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
+|++| ...++.|..+.+.+.++|.+.+
T Consensus 81 ~~~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 81 IFVNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEcCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 99999 4568999999999999998875
No 24
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.82 E-value=4.3e-17 Score=160.11 Aligned_cols=301 Identities=17% Similarity=0.291 Sum_probs=226.3
Q ss_pred CCcEEe-ChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 93 KDVVVL-KERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 93 ~~v~~l-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
..+..| +.+++++++...+.++|.|+..-+..+ ...|.++|+.+ + ++.|+.+ .++++|+++++.. |++
T Consensus 17 ~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~-~---~~~F~~t---~~~~v~~~~~v~~-~~i 85 (361)
T 3uem_A 17 EFATTLPDGAAAESLVESSEVAVIGFFKDVESDS---AKQFLQAAEAI-D---DIPFGIT---SNSDVFSKYQLDK-DGV 85 (361)
T ss_dssp SSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHC-S---SSCEEEE---CCHHHHHHTTCSS-SEE
T ss_pred ccceecCCHHHHHHHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcC-C---CceEEEE---CcHHHHHHhCCCC-CeE
Confidence 346666 458899999989999999998766665 46899999887 4 4777755 4689999999987 999
Q ss_pred EEEeC--CeeeeecCCCCHHHHHHHHHHHcCCCcccccchhHHHHhccCCC-eEEEEEecCCCCcc---hHHHHHhc-cc
Q 010469 172 YFFVD--GQHKAYNGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSET-KVVLGYLNSLVGSE---SEVLADAS-RL 244 (510)
Q Consensus 172 ~~~~~--g~~~~y~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~-~~~v~~~~~~~~~~---~~~~~~~~-~~ 244 (510)
++|+. +....|.|..+.+.|.+||.....|.+.+++. +.+.++..+.. ..++.|+..++... ...+..+| .+
T Consensus 86 ~lfk~f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~-~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~ 164 (361)
T 3uem_A 86 VLFKKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTE-QTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESF 164 (361)
T ss_dssp EEEESSTTSEEECCSCCCHHHHHHHHHHHSSCSEEECST-TTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGG
T ss_pred EEEEecCCCccccCCcCCHHHHHHHHHHcCCCcceecCc-ccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHc
Confidence 99975 57788999999999999999999998888866 56666666544 34555555555443 34566666 67
Q ss_pred cCceeEEEcC-----ChhHHHhhCCCCCCCCCeEEEeccCCCceeec--cCCCCCHHHHHHHHHhcCC------------
Q 010469 245 EDDVNFYQTT-----NPDVAKIFHLDSKVNRPALVMVKKETEKISYF--ADGKFDKSTIADFVFSNKL------------ 305 (510)
Q Consensus 245 ~~~~~f~~~~-----~~~l~~~~~~~~~~~~p~l~~~~~~~~~~~~y--~~g~~~~~~i~~fi~~~~~------------ 305 (510)
++.+.|+.+. ...+++.||+.. ...|++++++..+ ....| +.+..+.+.|.+|+....-
T Consensus 165 ~~~i~f~~vd~~~~~~~~~~~~fgi~~-~~~P~~~~~~~~~-~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~ 242 (361)
T 3uem_A 165 KGKILFIFIDSDHTDNQRILEFFGLKK-EECPAVRLITLEE-EMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQEL 242 (361)
T ss_dssp TTTCEEEEECTTSGGGHHHHHHTTCCT-TTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCC
T ss_pred cCceEEEEecCChHHHHHHHHHcCCCc-cCCccEEEEEcCC-cccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCC
Confidence 7889998754 346889999973 2369999998743 23344 1378999999999987421
Q ss_pred ------CceeecCCCchhhhccCCccceEEEEEec--cchhhHHHHHHHHHHhccCc--eEEEEEEcCCcccccchhhhc
Q 010469 306 ------PLVTIFTRENAPSVFESPIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKGK--LIFVYVQMDNEDVGKPVSEYF 375 (510)
Q Consensus 306 ------p~~~~lt~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~A~~~~~~--~~f~~vd~~~~~~~~~l~~~~ 375 (510)
..+..++.+++..+.....+.+++.|... ..|+...+.|.++|.+++++ +.|+.+|+.... ++.+
T Consensus 243 p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~-----~~~~ 317 (361)
T 3uem_A 243 PEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE-----VEAV 317 (361)
T ss_dssp CTTTTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB-----CSSC
T ss_pred CcccccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc-----hhhc
Confidence 23677888888887654445566666654 67999999999999999875 999999987633 5678
Q ss_pred CCCCCCCcEEEEeeCC-CCCcccCCCCCCHHHHHHHHHHh
Q 010469 376 GITGEAPKVLAYTGND-DAKKHILDGELTLDKIKTFGEDF 414 (510)
Q Consensus 376 gi~~~~~P~~~i~~~~-~~~~y~~~~~~t~e~i~~Fi~~~ 414 (510)
++.. .|+++++..+ +.....+.|..+.+.|.+||++-
T Consensus 318 ~v~~--~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 318 KVHS--FPTLKFFPASADRTVIDYNGERTLDGFKKFLESG 355 (361)
T ss_dssp CCCS--SSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTT
T ss_pred CCcc--cCeEEEEECCCCcceeEecCCCCHHHHHHHHHhc
Confidence 8865 4999888554 34567788999999999999764
No 25
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=1.3e-19 Score=149.56 Aligned_cols=111 Identities=36% Similarity=0.643 Sum_probs=99.4
Q ss_pred CCCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 92 DKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
.+.+..+++++|++++.+ .++|+||++||++|+++.|.|.++++.+++ .++.++.||++++++++++|+|.++||+
T Consensus 6 ~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~--~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 81 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGED--LEVNIAKVDVTEQPGLSGRFIINALPTI 81 (126)
T ss_dssp CCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGG--GTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhcc--CCeEEEEEECcCCHHHHHHcCCcccCEE
Confidence 456899999999988754 489999999999999999999999999875 3699999999999999999999999999
Q ss_pred EEEeCCeeeeecCCCCHHHHHHHHHHHcCCCcccc
Q 010469 172 YFFVDGQHKAYNGGRTKDAIVTWIKKKIGPGIYNI 206 (510)
Q Consensus 172 ~~~~~g~~~~y~g~~~~~~l~~~i~~~~~~~~~~i 206 (510)
++|++|+..++.|..+.+.+.+||.+.+...+..+
T Consensus 82 ~~~~~G~~~~~~G~~~~~~l~~~l~~~~~~~~~~~ 116 (126)
T 1x5e_A 82 YHCKDGEFRRYQGPRTKKDFINFISDKEWKSIEPV 116 (126)
T ss_dssp EEEETTEEEECCSCCCHHHHHHHHHTCGGGGSCEE
T ss_pred EEEeCCeEEEeecCCCHHHHHHHHHHHhhccCCCc
Confidence 99999987899999999999999999886655444
No 26
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.82 E-value=3.3e-20 Score=151.64 Aligned_cols=107 Identities=12% Similarity=0.140 Sum_probs=97.0
Q ss_pred CcEEeChhcHHHHHhCCCeEEEEEECCC--ChHHhhhhHHHHHHHHHHhhcCCC-eEEEEEeCcccHHHHHhCCCCcccE
Q 010469 94 DVVVLKERNFSDVIENNKFVMVEFYAPW--CGHCQALAPEYAAAATELKSANES-VVLAKVDATEENELAHEYDVQGFPT 170 (510)
Q Consensus 94 ~v~~l~~~~~~~~~~~~~~~~v~f~a~w--C~~C~~~~p~~~~~~~~~~~~~~~-v~~~~vd~~~~~~~~~~~~v~~~P~ 170 (510)
.+..+++++|++.+.++++++|.|||+| |++|+.+.|.+++++++|.+ + +.|++||.+++++++.+|+|+++||
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g---~~v~~~KVdvDe~~~lA~~ygV~sIPT 94 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD---YTWQVAIADLEQSEAIGDRFGAFRFPA 94 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT---SCCEEEECCHHHHHHHHHHHTCCSSSE
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC---CeEEEEEEECCCCHHHHHHcCCccCCE
Confidence 5778999999998887889999999999 99999999999999999987 7 9999999999999999999999999
Q ss_pred EEEEeCCee-eeecCCCCHHHHHHHHHHHcCCCc
Q 010469 171 IYFFVDGQH-KAYNGGRTKDAIVTWIKKKIGPGI 203 (510)
Q Consensus 171 ~~~~~~g~~-~~y~g~~~~~~l~~~i~~~~~~~~ 203 (510)
+++|++|+. .+..|..+.+.+.+||.+.+..+.
T Consensus 95 lilFk~G~~v~~~~G~~~k~~l~~~i~~~l~~~~ 128 (140)
T 2qgv_A 95 TLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQQ 128 (140)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHHC---
T ss_pred EEEEECCEEEEEEecCCCHHHHHHHHHHHhcCCC
Confidence 999999954 688999999999999998885543
No 27
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.81 E-value=2.3e-19 Score=143.06 Aligned_cols=103 Identities=24% Similarity=0.498 Sum_probs=95.0
Q ss_pred CCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEE
Q 010469 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~ 172 (510)
..+..+++++|++.+ ++++++|+||++||++|+.+.|.|.++++.+++ ++.++.||++++++++++|+|.++|+++
T Consensus 3 ~~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 78 (106)
T 3die_A 3 MAIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEG---KADILKLDVDENPSTAAKYEVMSIPTLI 78 (106)
T ss_dssp CCCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSBSEEE
T ss_pred cceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CcEEEEEECCcCHHHHHhCCCcccCEEE
Confidence 357889999999998 889999999999999999999999999999877 6999999999999999999999999999
Q ss_pred EEeCC-eeeeecCCCCHHHHHHHHHHHc
Q 010469 173 FFVDG-QHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 173 ~~~~g-~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
+|++| ...++.|..+.+.+.++|.+.+
T Consensus 79 ~~~~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 79 VFKDGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred EEeCCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 99999 4468999999999999998653
No 28
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.81 E-value=1.9e-19 Score=144.95 Aligned_cols=105 Identities=34% Similarity=0.745 Sum_probs=95.3
Q ss_pred CCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEE
Q 010469 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~ 172 (510)
+.+..+++++|++.+. +++++|+||++||++|+.+.|.|.++++.+......+.++.||++++++++++|+|.++|+++
T Consensus 5 ~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 83 (111)
T 3uvt_A 5 STVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLL 83 (111)
T ss_dssp CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEE
Confidence 4689999999999988 779999999999999999999999999887653347999999999999999999999999999
Q ss_pred EEeCC-eeeeecCCCCHHHHHHHHHHH
Q 010469 173 FFVDG-QHKAYNGGRTKDAIVTWIKKK 198 (510)
Q Consensus 173 ~~~~g-~~~~y~g~~~~~~l~~~i~~~ 198 (510)
+|++| ...++.|..+.+.+.+||.+.
T Consensus 84 ~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 84 LFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred EEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 99999 446899999999999999875
No 29
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.81 E-value=2.8e-19 Score=143.14 Aligned_cols=104 Identities=23% Similarity=0.598 Sum_probs=94.7
Q ss_pred CCcEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 93 KDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
+.|..+++++|++.+ .++++++|+||++||++|+.+.|.|.++++.+++ ++.++.||++++++++++|+|.++|++
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 78 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG---KLTVAKLNIDQNPGTAPKYGIRGIPTL 78 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTCTTHHHHTTCCSSSEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC---CcEEEEEECCCCHHHHHHcCCcccCEE
Confidence 468899999999654 6789999999999999999999999999999876 699999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHHc
Q 010469 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 172 ~~~~~g~-~~~y~g~~~~~~l~~~i~~~~ 199 (510)
++|++|+ ..++.|..+.+.+.+|+.+.+
T Consensus 79 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 79 LLFKNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEeCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 9999994 467899999999999998875
No 30
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=3e-19 Score=148.89 Aligned_cols=110 Identities=45% Similarity=0.805 Sum_probs=97.9
Q ss_pred CCCCcEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhc-CCCeEEEEEeCcccHHHHHhCCCCcc
Q 010469 91 DDKDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSA-NESVVLAKVDATEENELAHEYDVQGF 168 (510)
Q Consensus 91 ~~~~v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~v~~~~vd~~~~~~~~~~~~v~~~ 168 (510)
....+..++.++|++.+ ..+++++|+||++||++|+.+.|.|.++++.++.. ..++.++.||++++++++++|+|.++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 84 (133)
T 1x5d_A 5 SSGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGF 84 (133)
T ss_dssp SCCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSS
T ss_pred CCCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCee
Confidence 34568999999999876 66889999999999999999999999999999721 12699999999999999999999999
Q ss_pred cEEEEEeCC-eeeeecCCCCHHHHHHHHHHHcC
Q 010469 169 PTIYFFVDG-QHKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 169 P~~~~~~~g-~~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
|++++|++| ...+|.|..+.+.+.+|+.+.+.
T Consensus 85 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 85 PTIKIFQKGESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp SEEEEEETTEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCceEEecCCCCHHHHHHHHHHHhh
Confidence 999999999 45789999999999999998874
No 31
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.81 E-value=2.1e-19 Score=143.08 Aligned_cols=102 Identities=26% Similarity=0.563 Sum_probs=93.7
Q ss_pred cEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEE
Q 010469 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFF 174 (510)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~ 174 (510)
+..+++++|++++.++++++|.||++||++|+.+.|.|+++++.+++ ++.++.||++++++++++|+|.++|++++|
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 78 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD---KVTVAKLNVDENPETTSQFGIMSIPTLILF 78 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT---TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CcEEEEEECcCCHHHHHHcCCccccEEEEE
Confidence 67899999998888889999999999999999999999999998876 699999999999999999999999999999
Q ss_pred eCCe-eeeecCCCCHHHHHHHHHHHc
Q 010469 175 VDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 175 ~~g~-~~~y~g~~~~~~l~~~i~~~~ 199 (510)
++|+ ..++.|..+.+.+.+++.+.+
T Consensus 79 ~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 79 KGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp ETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred eCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 9995 457899999999999987654
No 32
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.81 E-value=4e-20 Score=151.15 Aligned_cols=111 Identities=54% Similarity=1.064 Sum_probs=101.3
Q ss_pred CCCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 92 DKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
.+.+..+++++|++.+.++++++|+||++||++|+.+.|.|.++++.+++.+.++.++.+|+++++.++++|+|.++|++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (120)
T 1mek_A 6 EDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTI 85 (120)
T ss_dssp ETTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEE
T ss_pred CCCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEE
Confidence 34689999999999998899999999999999999999999999999876545799999999999999999999999999
Q ss_pred EEEeCCe-e--eeecCCCCHHHHHHHHHHHcCCC
Q 010469 172 YFFVDGQ-H--KAYNGGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 172 ~~~~~g~-~--~~y~g~~~~~~l~~~i~~~~~~~ 202 (510)
++|++|+ . ..|.|..+.+.+.+|+.+.++++
T Consensus 86 ~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 86 KFFRNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp EEEESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred EEEeCCCcCCcccccCccCHHHHHHHHHhccCCC
Confidence 9999884 3 68999999999999999988765
No 33
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.81 E-value=4.4e-19 Score=151.62 Aligned_cols=107 Identities=29% Similarity=0.609 Sum_probs=98.2
Q ss_pred CCCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 92 DKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
.+.+..+++.+|++.+.++++++|+||++||++|+.+.|.|+++++++.+ ++.|+.||++++++++++|+|+++|++
T Consensus 46 ~~~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~---~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 122 (155)
T 2ppt_A 46 TGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG---QVRLAKIDTQAHPAVAGRHRIQGIPAF 122 (155)
T ss_dssp CSSEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---TCEEEEEETTTSTHHHHHTTCCSSSEE
T ss_pred CCCCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC---CEEEEEEeCCccHHHHHHcCCCcCCEE
Confidence 35688999999999887789999999999999999999999999999986 699999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHHcCC
Q 010469 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 172 ~~~~~g~-~~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
++|++|+ ..++.|..+.+.|.+||.+.++.
T Consensus 123 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 123 ILFHKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEeCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 9999994 46799999999999999998764
No 34
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.81 E-value=2.6e-19 Score=150.54 Aligned_cols=108 Identities=26% Similarity=0.464 Sum_probs=98.6
Q ss_pred CCCCcEEeChhcHH-HHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCccc
Q 010469 91 DDKDVVVLKERNFS-DVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFP 169 (510)
Q Consensus 91 ~~~~v~~l~~~~~~-~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 169 (510)
....+..+++++|. .++.++++++|+||++||++|+.+.|.|.++++.+.+ ++.++.||++++++++++|+|.++|
T Consensus 4 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~P 80 (140)
T 3hz4_A 4 NGSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS---SAVFGRINIATNPWTAEKYGVQGTP 80 (140)
T ss_dssp CTTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---TSEEEEEETTTCHHHHHHHTCCEES
T ss_pred CCcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC---ceEEEEEECCcCHhHHHHCCCCcCC
Confidence 34578999999999 5667789999999999999999999999999999977 6999999999999999999999999
Q ss_pred EEEEEeCCee-eeecCCCCHHHHHHHHHHHcCC
Q 010469 170 TIYFFVDGQH-KAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 170 ~~~~~~~g~~-~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
|+++|++|+. .++.|..+.+.+.+||.+.+..
T Consensus 81 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 81 TFKFFCHGRPVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp EEEEEETTEEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEEEEeCCcEEEEEcCCCCHHHHHHHHHHHhcc
Confidence 9999999954 5899999999999999988843
No 35
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.81 E-value=1.7e-19 Score=146.37 Aligned_cols=102 Identities=24% Similarity=0.558 Sum_probs=91.7
Q ss_pred CCcEEeChhcHHHHHh--CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccE
Q 010469 93 KDVVVLKERNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~ 170 (510)
......+.++|++.+. ++++++|+||++||++|+.+.|.|+++++++++ +.|+.||++++++++++|+|.++|+
T Consensus 12 ~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~----v~~~~vd~d~~~~l~~~~~v~~~Pt 87 (116)
T 3qfa_C 12 SVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN----VIFLEVDVDDCQDVASECEVKSMPT 87 (116)
T ss_dssp CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT----SEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred cccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----CEEEEEECCCCHHHHHHcCCccccE
Confidence 3455678999999987 889999999999999999999999999988754 9999999999999999999999999
Q ss_pred EEEEeCC-eeeeecCCCCHHHHHHHHHHHc
Q 010469 171 IYFFVDG-QHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 171 ~~~~~~g-~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
+++|++| ...++.|. +.+.+.++|.+.+
T Consensus 88 ~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 88 FQFFKKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp EEEESSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred EEEEeCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 9999989 45678898 9999999998764
No 36
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.80 E-value=1.9e-19 Score=162.48 Aligned_cols=115 Identities=26% Similarity=0.640 Sum_probs=105.0
Q ss_pred CCCCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccE
Q 010469 91 DDKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (510)
Q Consensus 91 ~~~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~ 170 (510)
+...+..+++++|+..+.++++++|+||++||++|+.+.|.|.++++.+++ .+.++.|||++++.+|++++|.++||
T Consensus 95 ~~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt 171 (210)
T 3apq_A 95 DDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG---LLRIGAVNCGDDRMLCRMKGVNSYPS 171 (210)
T ss_dssp TCTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT---TBEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC---ceEEEEEECCccHHHHHHcCCCcCCe
Confidence 345689999999999988899999999999999999999999999999876 69999999999999999999999999
Q ss_pred EEEEeCC-eeeeecCCCCHHHHHHHHHHHcCCCcccccc
Q 010469 171 IYFFVDG-QHKAYNGGRTKDAIVTWIKKKIGPGIYNITT 208 (510)
Q Consensus 171 ~~~~~~g-~~~~y~g~~~~~~l~~~i~~~~~~~~~~i~~ 208 (510)
+++|++| ...++.|..+.+.+.+||.+.+++.+.+|++
T Consensus 172 ~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~~~~i~~ 210 (210)
T 3apq_A 172 LFIFRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELST 210 (210)
T ss_dssp EEEECTTSCCEECCSCCCHHHHHHHHHHHHHCCSSCC--
T ss_pred EEEEECCCceeEecCCCCHHHHHHHHHHhCcccceecCC
Confidence 9999988 4578999999999999999999988887753
No 37
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.80 E-value=4.3e-19 Score=142.24 Aligned_cols=105 Identities=29% Similarity=0.593 Sum_probs=96.0
Q ss_pred CcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEE
Q 010469 94 DVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYF 173 (510)
Q Consensus 94 ~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~ 173 (510)
.+..+++++|++++.++++++|+||++||++|+.+.|.|.++++.+.+ ++.++.||++++++++++|+|.++|++++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG---KLLVAKLDVDENPKTAMRYRVMSIPTVIL 78 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT---TBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC---ceEEEEEECCCCHhHHHhCCCCcCCEEEE
Confidence 578899999999888899999999999999999999999999999876 69999999999999999999999999999
Q ss_pred EeCCe-eeeecCCCCHHHHHHHHHHHcCC
Q 010469 174 FVDGQ-HKAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 174 ~~~g~-~~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
|++|+ ...+.|..+.+.+.+|+.+.++.
T Consensus 79 ~~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 79 FKDGQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred EeCCcEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 99995 45799999999999999987753
No 38
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.80 E-value=2.4e-18 Score=157.68 Aligned_cols=193 Identities=16% Similarity=0.208 Sum_probs=146.1
Q ss_pred hcHHHHH--hCCCeEEEEEE-----CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEE
Q 010469 101 RNFSDVI--ENNKFVMVEFY-----APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYF 173 (510)
Q Consensus 101 ~~~~~~~--~~~~~~~v~f~-----a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~ 173 (510)
+.+.+.+ ...++++|.|| ++||++|+.+.|.|.++++.+.+ ...+.++.|||++++++|++|+|+++||+++
T Consensus 9 ~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~-~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~ 87 (229)
T 2ywm_A 9 MQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVG-QDKIKLDIYSPFTHKEETEKYGVDRVPTIVI 87 (229)
T ss_dssp HHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHC-TTTEEEEEECTTTCHHHHHHTTCCBSSEEEE
T ss_pred HHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCC-CCceEEEEecCcccHHHHHHcCCCcCcEEEE
Confidence 4455556 33455555555 89999999999999999988843 1279999999999999999999999999999
Q ss_pred EeCC-eeeeecCCCCHHHHHHHHHHHcC--CCcccccchhHHHHhccCCCeE-EEEEecCCCCcchH---HHHHhccccC
Q 010469 174 FVDG-QHKAYNGGRTKDAIVTWIKKKIG--PGIYNITTLDEAERVLTSETKV-VLGYLNSLVGSESE---VLADASRLED 246 (510)
Q Consensus 174 ~~~g-~~~~y~g~~~~~~l~~~i~~~~~--~~~~~i~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~---~~~~~~~~~~ 246 (510)
|++| ...+|.|.++.+.+..|+...+. ..+..++. +.++.+......+ ++.|+..++..... .+..++....
T Consensus 88 ~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~ 166 (229)
T 2ywm_A 88 EGDKDYGIRYIGLPAGLEFTTLINGIFHVSQRKPQLSE-KTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND 166 (229)
T ss_dssp ESSSCCCEEEESCCCTTHHHHHHHHHHHHHTTCCSCCH-HHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT
T ss_pred ECCCcccceecCCccHHHHHHHHHHHHhccCCccCCCH-HHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC
Confidence 9876 56799999999999999988653 33445543 6777777655555 66688888876433 4445553335
Q ss_pred ceeEEEc---CChhHHHhhCCCCCCCCCeEEEeccCCCceeeccCCCCCHHHHHHHHHhc
Q 010469 247 DVNFYQT---TNPDVAKIFHLDSKVNRPALVMVKKETEKISYFADGKFDKSTIADFVFSN 303 (510)
Q Consensus 247 ~~~f~~~---~~~~l~~~~~~~~~~~~p~l~~~~~~~~~~~~y~~g~~~~~~i~~fi~~~ 303 (510)
.+.|+.+ .+.+++++|++.. .|++++ ++ ....| .|..+.++|.+||...
T Consensus 167 ~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~---~G-~~~~~-~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 167 YITSKVIDASENQDLAEQFQVVG---VPKIVI---NK-GVAEF-VGAQPENAFLGYIMAV 218 (229)
T ss_dssp TEEEEEEEGGGCHHHHHHTTCCS---SSEEEE---GG-GTEEE-ESCCCHHHHHHHHHHH
T ss_pred CeEEEEEECCCCHHHHHHcCCcc---cCEEEE---CC-EEEEe-eCCCCHHHHHHHHHHH
Confidence 7777765 4678999999986 899987 22 34557 8888999999999754
No 39
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.80 E-value=5.4e-19 Score=147.81 Aligned_cols=109 Identities=28% Similarity=0.553 Sum_probs=98.4
Q ss_pred CCCCcEEeChhcHHHHHh------------CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHH
Q 010469 91 DDKDVVVLKERNFSDVIE------------NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE 158 (510)
Q Consensus 91 ~~~~v~~l~~~~~~~~~~------------~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~ 158 (510)
....+..++.++|.+.+. ++++++|+||++||++|+.+.|.|.++++++++ ++.++.||++++++
T Consensus 7 ~~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~---~v~~~~vd~~~~~~ 83 (136)
T 2l5l_A 7 GNGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG---QIVIYKVDTEKEQE 83 (136)
T ss_dssp CTTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHH
T ss_pred cCCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC---CEEEEEEeCCCCHH
Confidence 345689999999998775 468999999999999999999999999999876 69999999999999
Q ss_pred HHHhCCCCcccEEEEE-eCCeeeeecCCCCHHHHHHHHHHHcCCC
Q 010469 159 LAHEYDVQGFPTIYFF-VDGQHKAYNGGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 159 ~~~~~~v~~~P~~~~~-~~g~~~~y~g~~~~~~l~~~i~~~~~~~ 202 (510)
++++|+|.++|++++| ++|+...+.|..+.+.+.+||.+.++..
T Consensus 84 l~~~~~v~~~Pt~~~~~~~G~~~~~~G~~~~~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 84 LAGAFGIRSIPSILFIPMEGKPEMAQGAMPKASFKKAIDEFLLKK 128 (136)
T ss_dssp HHHHTTCCSSCEEEEECSSSCCEEEESCCCHHHHHHHHHHHHTSC
T ss_pred HHHHcCCCCCCEEEEECCCCcEEEEeCCCCHHHHHHHHHHHhhcc
Confidence 9999999999999999 6886668999999999999999988553
No 40
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.80 E-value=1.1e-18 Score=159.55 Aligned_cols=193 Identities=14% Similarity=0.215 Sum_probs=147.9
Q ss_pred hcHHHHH-h--CCCeEEEEEECC-CChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc--cHHHHHhCCCCcccEEEEE
Q 010469 101 RNFSDVI-E--NNKFVMVEFYAP-WCGHCQALAPEYAAAATELKSANESVVLAKVDATE--ENELAHEYDVQGFPTIYFF 174 (510)
Q Consensus 101 ~~~~~~~-~--~~~~~~v~f~a~-wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~P~~~~~ 174 (510)
+.+++.+ . ++++++|.||++ ||++|+++.|.|+++++. .+ ++.++.|||++ ++++|++|+|.++||+++|
T Consensus 10 ~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~---~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~ 85 (226)
T 1a8l_A 10 KVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TD---KLSYEIVDFDTPEGKELAKRYRIDRAPATTIT 85 (226)
T ss_dssp HHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CT---TEEEEEEETTSHHHHHHHHHTTCCSSSEEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CC---ceEEEEEeCCCcccHHHHHHcCCCcCceEEEE
Confidence 4455656 2 356778999999 999999999999999854 23 69999999999 9999999999999999999
Q ss_pred eCCe--eeeecCCCCHHHHHHHHHHHcC--CCcccccchhHHHHhccCCCeE-EEEEecCCCCcchH---HHHHhc-ccc
Q 010469 175 VDGQ--HKAYNGGRTKDAIVTWIKKKIG--PGIYNITTLDEAERVLTSETKV-VLGYLNSLVGSESE---VLADAS-RLE 245 (510)
Q Consensus 175 ~~g~--~~~y~g~~~~~~l~~~i~~~~~--~~~~~i~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~---~~~~~~-~~~ 245 (510)
++|. ..+|.|....+.+..|+...+. .....+ +.+.++.+......+ ++.|+.+++..... .+..++ .+.
T Consensus 86 ~~g~~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l-~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~ 164 (226)
T 1a8l_A 86 QDGKDFGVRYFGLPAGHEFAAFLEDIVDVSREETNL-MDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENT 164 (226)
T ss_dssp ETTBCCSEEEESCCCTTHHHHHHHHHHHHHHTCCCC-CHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHH
T ss_pred cCCceeeEEEeccCcHHHHHHHHHHHHhhcCCCCCC-CHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcc
Confidence 9884 3689999999999999988653 223333 335666666555555 78888888876443 444544 333
Q ss_pred ----CceeEEEc---CChhHHHhhCCCCCCCCCeEEEeccCCCceeeccCCCCCHHHHHHHHHhc
Q 010469 246 ----DDVNFYQT---TNPDVAKIFHLDSKVNRPALVMVKKETEKISYFADGKFDKSTIADFVFSN 303 (510)
Q Consensus 246 ----~~~~f~~~---~~~~l~~~~~~~~~~~~p~l~~~~~~~~~~~~y~~g~~~~~~i~~fi~~~ 303 (510)
..+.|+.+ .+.+++++|++.. .|++++|+.+ .....| .|..+.++|.+||...
T Consensus 165 ~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~~~~G-~~~~~~-~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 165 KAGKGKILGDMVEAIEYPEWADQYNVMA---VPKIVIQVNG-EDRVEF-EGAYPEKMFLEKLLSA 224 (226)
T ss_dssp HTTCCCEEEEEEEGGGCHHHHHHTTCCS---SCEEEEEETT-EEEEEE-ESCCCHHHHHHHHHHH
T ss_pred cccCCcEEEEEEEcccCHHHHHhCCCcc---cCeEEEEeCC-ceeEEE-cCCCCHHHHHHHHHHh
Confidence 46777765 4567999999986 8999999744 345667 8888999999999764
No 41
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.80 E-value=5.8e-19 Score=150.04 Aligned_cols=107 Identities=25% Similarity=0.646 Sum_probs=99.4
Q ss_pred CCCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 92 DKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
...+..+++++|++.+..+++++|+||++||++|+.+.|.|+++++.+.+ ++.++.||++++++++++|+|.++|++
T Consensus 37 ~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 113 (148)
T 3p2a_A 37 DGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG---KVRFVKVNTEAEPALSTRFRIRSIPTI 113 (148)
T ss_dssp CCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC---ceEEEEEECcCCHHHHHHCCCCccCEE
Confidence 45789999999999998899999999999999999999999999999876 699999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHHcCC
Q 010469 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 172 ~~~~~g~-~~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
++|++|+ ..++.|..+.+.+.+||.+.+..
T Consensus 114 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 114 MLYRNGKMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp EEEETTEEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred EEEECCeEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 9999994 46899999999999999998754
No 42
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.80 E-value=1.9e-19 Score=151.30 Aligned_cols=133 Identities=36% Similarity=0.621 Sum_probs=108.8
Q ss_pred HHHhcCCCceeecCCCchhhhccCCccceEEEEEec--cchhhHHHHHHHHHHhccCceEEEEEEcCCcccccchhhhcC
Q 010469 299 FVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFG 376 (510)
Q Consensus 299 fi~~~~~p~~~~lt~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~A~~~~~~~~f~~vd~~~~~~~~~l~~~~g 376 (510)
-+..+++|+|.++|.+|...++.++.+.++++|... .+.+.+.+.++++|++|++++.|+++|..... ...+++.||
T Consensus 7 ~~~~~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~-~~~~l~~fG 85 (147)
T 3bj5_A 7 HMKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTD-NQRILEFFG 85 (147)
T ss_dssp --------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGG-GHHHHHHTT
T ss_pred chhhccCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHh-HHHHHHHcC
Confidence 457889999999999999999999988877777753 44778999999999999999999999974344 335778999
Q ss_pred CCCCCCcEEEEeeC-CCCCcccCC-CCCCHHHHHHHHHHhhcCcccccccCCCCCCCC
Q 010469 377 ITGEAPKVLAYTGN-DDAKKHILD-GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETN 432 (510)
Q Consensus 377 i~~~~~P~~~i~~~-~~~~~y~~~-~~~t~e~i~~Fi~~~~~Gkl~~~~kSe~~p~~~ 432 (510)
++..+.|+++|.+. ....+|.+. ++++.+.|.+|++++++|+|+|++||||+|+.|
T Consensus 86 l~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~p~~KSEpiPe~w 143 (147)
T 3bj5_A 86 LKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDW 143 (147)
T ss_dssp CCGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSCEEECCSCCCGGG
T ss_pred CCcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCccccccCCCCCCCc
Confidence 99878999999876 557789876 789999999999999999999999999999974
No 43
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.80 E-value=8.7e-19 Score=139.97 Aligned_cols=103 Identities=24% Similarity=0.617 Sum_probs=94.1
Q ss_pred CCcEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 93 KDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
+.+..+++++|++.+ .++++++|.||++||++|+.+.|.|.++++.+++ ++.++.||+++++.++++|+|.++|++
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 78 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG---KVTVAKVNIDDNPETPNAYQVRSIPTL 78 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT---SEEEEEEETTTCCHHHHHTTCCSSSEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC---cEEEEEEECCCCHHHHHhcCCCccCEE
Confidence 358899999999765 6789999999999999999999999999999876 699999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHH
Q 010469 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKK 198 (510)
Q Consensus 172 ~~~~~g~-~~~y~g~~~~~~l~~~i~~~ 198 (510)
++|++|+ ..++.|..+.+.+.+||.+.
T Consensus 79 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 79 MLVRDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred EEEeCCEEEEEecCCCCHHHHHHHHHhc
Confidence 9999995 45789999999999999875
No 44
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.80 E-value=6.4e-19 Score=143.73 Aligned_cols=111 Identities=29% Similarity=0.574 Sum_probs=97.4
Q ss_pred CCccCCCCcEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCC
Q 010469 87 EPEIDDKDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDV 165 (510)
Q Consensus 87 ~~~~~~~~v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v 165 (510)
.+......+..+++++|++.+ +.+++++|+||++||++|+.+.|.|.++++++.+ ++.++.||++++++++++|+|
T Consensus 7 ~~~~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~---~v~~~~vd~d~~~~l~~~~~v 83 (119)
T 1w4v_A 7 HHHHGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG---KVVMAKVDIDDHTDLAIEYEV 83 (119)
T ss_dssp ---CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---SSEEEEEETTTTHHHHHHTTC
T ss_pred cccCCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEeCCCCHHHHHHcCC
Confidence 344455679999999999865 6678999999999999999999999999998876 699999999999999999999
Q ss_pred CcccEEEEEeCCe-eeeecCCCCHHHHHHHHHHHcC
Q 010469 166 QGFPTIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 166 ~~~P~~~~~~~g~-~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
.++|++++|++|+ ..++.|..+.+.+.+||.+.++
T Consensus 84 ~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 84 SAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp CSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred CcccEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHhC
Confidence 9999999999995 4588999999999999988763
No 45
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.80 E-value=5.4e-19 Score=145.96 Aligned_cols=104 Identities=22% Similarity=0.563 Sum_probs=95.0
Q ss_pred CCcEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 93 KDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
..|..++.++|++.+ .++++++|+||++||++|+.+.|.|+++++.+++ ++.++.||++++++++++|+|.++|++
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 98 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG---KLTVAKLNIDQNPGTAPKYGIRGIPTL 98 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT---TEEEEEEETTTCCTTSGGGTCCSSSEE
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEECCCCHHHHHHcCCCccCEE
Confidence 458899999999654 6789999999999999999999999999999876 699999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHHc
Q 010469 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 172 ~~~~~g~-~~~y~g~~~~~~l~~~i~~~~ 199 (510)
++|++|+ ..++.|..+.+.+.+||.+.+
T Consensus 99 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 99 LLFKNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEeCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 9999995 467999999999999998865
No 46
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.80 E-value=7.8e-19 Score=140.73 Aligned_cols=100 Identities=27% Similarity=0.530 Sum_probs=89.9
Q ss_pred cEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEE
Q 010469 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFF 174 (510)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~ 174 (510)
....+.++|++.+.++++++|+||++||++|+.+.|.|+++++++.+ +.++.||++++++++++|+|.++|++++|
T Consensus 9 ~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~----~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 84 (109)
T 3f3q_A 9 TQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ----ADFYKLDVDELGDVAQKNEVSAMPTLLLF 84 (109)
T ss_dssp EECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC----CEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 44567899999999999999999999999999999999999998854 99999999999999999999999999999
Q ss_pred eCCe-eeeecCCCCHHHHHHHHHHHc
Q 010469 175 VDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 175 ~~g~-~~~y~g~~~~~~l~~~i~~~~ 199 (510)
++|+ ..++.|. +.+.+.++|.+.+
T Consensus 85 ~~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 85 KNGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp ETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred ECCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 9994 4578888 7799999998753
No 47
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.80 E-value=1.1e-18 Score=140.61 Aligned_cols=105 Identities=30% Similarity=0.575 Sum_probs=94.9
Q ss_pred CCcEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 93 KDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
+.|..+++++|.+.+ +++++++|.||++||++|+.+.|.|.++++.+++ ++.++.||++++++++++|+|.++|++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 81 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD---KIEIVKLNIDENPGTAAKYGVMSIPTL 81 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC---CeEEEEEEcCCCHHHHHhCCCCcccEE
Confidence 357899999998755 6688999999999999999999999999999876 699999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHHcC
Q 010469 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 172 ~~~~~g~-~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
++|++|+ ..++.|..+.+.+.+++.+.+.
T Consensus 82 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 82 NVYQGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred EEEeCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 9999994 4678999999999999988764
No 48
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.79 E-value=9.4e-19 Score=150.07 Aligned_cols=112 Identities=17% Similarity=0.308 Sum_probs=96.3
Q ss_pred CCCcEEeChhcHHHHHhC--CCeEEEEEEC-------CCChHHhhhhHHHHHHHHHHhhcC--CCeEEEEEeCcccHHHH
Q 010469 92 DKDVVVLKERNFSDVIEN--NKFVMVEFYA-------PWCGHCQALAPEYAAAATELKSAN--ESVVLAKVDATEENELA 160 (510)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~--~~~~~v~f~a-------~wC~~C~~~~p~~~~~~~~~~~~~--~~v~~~~vd~~~~~~~~ 160 (510)
.+.|+.||+++|++++.+ +.++||.||| +||++|+.+.|.|+++++++.... .++.|+.||++++++++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la 96 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLV 96 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHH
Confidence 456999999999998854 4589999999 499999999999999999997211 27999999999999999
Q ss_pred HhCCCCcccEEEEEeCCe--e-----------eee---cC-CCCHHHHHHHHHHHcCCCc
Q 010469 161 HEYDVQGFPTIYFFVDGQ--H-----------KAY---NG-GRTKDAIVTWIKKKIGPGI 203 (510)
Q Consensus 161 ~~~~v~~~P~~~~~~~g~--~-----------~~y---~g-~~~~~~l~~~i~~~~~~~~ 203 (510)
++|+|+++||+++|++|. . ..| .| .++.+.+.+||.+.++..+
T Consensus 97 ~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i 156 (178)
T 3ga4_A 97 KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISI 156 (178)
T ss_dssp HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCC
T ss_pred HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCc
Confidence 999999999999999872 2 345 35 8999999999999998655
No 49
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.79 E-value=1.1e-18 Score=138.48 Aligned_cols=102 Identities=30% Similarity=0.635 Sum_probs=93.9
Q ss_pred cEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEE
Q 010469 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFF 174 (510)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~ 174 (510)
|..+++++|++.+.++++++|+||++||++|+.+.|.|.++++.+++ +.++.+|+++++++++++++.++|++++|
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 76 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ----VGFGKLNSDENPDIAARYGVMSLPTVIFF 76 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC----ceEEEEECCCCHHHHHhCCccccCEEEEE
Confidence 46789999999998899999999999999999999999999988754 99999999999999999999999999999
Q ss_pred eCCee-eeecCCCCHHHHHHHHHHHcC
Q 010469 175 VDGQH-KAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 175 ~~g~~-~~y~g~~~~~~l~~~i~~~~~ 200 (510)
++|+. .++.|..+.+.+.+|+.+.++
T Consensus 77 ~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 77 KDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred ECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 99954 589999999999999998764
No 50
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.79 E-value=6.1e-19 Score=148.60 Aligned_cols=107 Identities=29% Similarity=0.593 Sum_probs=95.9
Q ss_pred CCCCcEEeChhcHHHHHhC------------CCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHH
Q 010469 91 DDKDVVVLKERNFSDVIEN------------NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE 158 (510)
Q Consensus 91 ~~~~v~~l~~~~~~~~~~~------------~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~ 158 (510)
....+..++..+|...+.. +++++|+||++||++|+.+.|.|.++++.+.+ ++.++.||++++++
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~ 96 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG---KIYIYKVNVDKEPE 96 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHH
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC---ceEEEEEECCCCHH
Confidence 4457899999999988753 78999999999999999999999999999976 69999999999999
Q ss_pred HHHhCCCCcccEEEEEe-CCeeeeecCCCCHHHHHHHHHHHcC
Q 010469 159 LAHEYDVQGFPTIYFFV-DGQHKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 159 ~~~~~~v~~~P~~~~~~-~g~~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
++++|+|.++|++++|+ +|....+.|..+.+.+.+||.+.+.
T Consensus 97 ~~~~~~v~~~Pt~~~~~~~g~~~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 97 LARDFGIQSIPTIWFVPMKGEPQVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HHHHTTCCSSSEEEEECSSSCCEEEESCCCHHHHHHHHHHTTC
T ss_pred HHHHcCCCCcCEEEEEeCCCCEEEEeCCCCHHHHHHHHHHHHc
Confidence 99999999999999995 6666799999999999999998764
No 51
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.79 E-value=1.5e-18 Score=140.64 Aligned_cols=105 Identities=23% Similarity=0.531 Sum_probs=96.2
Q ss_pred CCcEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 93 KDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
+.|..+++++|++.+ ..+++++|.||++||++|+.+.|.|+++++.+++ ++.++.||++++++++++|+|.++|++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~Pt~ 83 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD---RLKVVKLEIDPNPTTVKKYKVEGVPAL 83 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT---TCEEEEEESTTCHHHHHHTTCCSSSEE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC---cEEEEEEEcCCCHHHHHHcCCCceeEE
Confidence 458999999999865 6789999999999999999999999999999876 699999999999999999999999999
Q ss_pred EEEeCCee-eeecCCCCHHHHHHHHHHHcC
Q 010469 172 YFFVDGQH-KAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 172 ~~~~~g~~-~~y~g~~~~~~l~~~i~~~~~ 200 (510)
++|++|+. .++.|..+.+.+.+|+.+.++
T Consensus 84 ~~~~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 84 RLVKGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEEcCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 99999954 578999999999999998875
No 52
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.79 E-value=1.2e-18 Score=139.28 Aligned_cols=103 Identities=31% Similarity=0.622 Sum_probs=93.6
Q ss_pred CcEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEE
Q 010469 94 DVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (510)
Q Consensus 94 ~v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~ 172 (510)
.|..+++++|++.+ .++++++|.||++||++|+.+.|.|.++++.+++ ++.++.||++++++++++|+|.++|+++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 78 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD---KLKCVKLNTDESPNVASEYGIRSIPTIM 78 (107)
T ss_dssp CCEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHHTCCSSCEEE
T ss_pred ccEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC---ceEEEEEECCCCHHHHHHCCCCcCCEEE
Confidence 36789999999865 6688999999999999999999999999999876 6999999999999999999999999999
Q ss_pred EEeCC-eeeeecCCCCHHHHHHHHHHHc
Q 010469 173 FFVDG-QHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 173 ~~~~g-~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
++++| ...++.|..+.+.+.+++.+.+
T Consensus 79 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 79 VFKGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp EESSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99988 4468899999999999998765
No 53
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=9.2e-19 Score=145.27 Aligned_cols=106 Identities=43% Similarity=0.780 Sum_probs=96.4
Q ss_pred CCCcEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccE
Q 010469 92 DKDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (510)
Q Consensus 92 ~~~v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~ 170 (510)
.+.+..++.++|++.+ ..+++++|+||++||++|+.+.|.|.++++.+++ .+.++.||++++++++++|+|.++|+
T Consensus 16 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt 92 (130)
T 2dml_A 16 SDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD---VVKVGAVNADKHQSLGGQYGVQGFPT 92 (130)
T ss_dssp TSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT---TSEEEEEETTTCHHHHHHHTCCSSSE
T ss_pred CCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC---ceEEEEEeCCCCHHHHHHcCCCccCE
Confidence 4568999999999855 6788999999999999999999999999999876 69999999999999999999999999
Q ss_pred EEEEeCC-e-eeeecCCCCHHHHHHHHHHHcC
Q 010469 171 IYFFVDG-Q-HKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 171 ~~~~~~g-~-~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
+++|++| . ...|.|..+.+.+.+|+.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 93 IKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp EEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 9999876 4 6789999999999999998763
No 54
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.79 E-value=1.8e-19 Score=143.49 Aligned_cols=97 Identities=16% Similarity=0.216 Sum_probs=76.7
Q ss_pred ChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEEeCCe
Q 010469 99 KERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQ 178 (510)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~~g~ 178 (510)
+.++|++.+.++++++|+|||+||++|+.+.|.|.++++.+. ++.++.||++++++++++|+|.++||+++|++|+
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 82 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN----YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGK 82 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT----TEEEEEEEECCC---------CCCCEEEEEETTE
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC----CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCe
Confidence 345666667788999999999999999999999999999873 5999999999999999999999999999999994
Q ss_pred e-eeecCCCCHHHHHHHHHHHc
Q 010469 179 H-KAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 179 ~-~~y~g~~~~~~l~~~i~~~~ 199 (510)
. .++.|..+.+.+.+++.+.+
T Consensus 83 ~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 83 EILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEEEEESSCCHHHHHHHHHTTC
T ss_pred EEEEEeCCcCHHHHHHHHHHhh
Confidence 4 68899999999999998764
No 55
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.79 E-value=1.9e-18 Score=139.07 Aligned_cols=103 Identities=24% Similarity=0.490 Sum_probs=91.4
Q ss_pred CCCcEEeChhcHHHHHh--CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc-ccHHHHHhCCCCcc
Q 010469 92 DKDVVVLKERNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-EENELAHEYDVQGF 168 (510)
Q Consensus 92 ~~~v~~l~~~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-~~~~~~~~~~v~~~ 168 (510)
.+.+..+++++|++.+. ++++++|+||++||++|+.+.|.|.++++.+++ +.++.||++ ++++++++|+|.++
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~----v~~~~vd~~~~~~~~~~~~~v~~~ 79 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD----VIFLKLDCNQENKTLAKELGIRVV 79 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEECSSTTHHHHHHHCCSBS
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC----eEEEEEecCcchHHHHHHcCCCee
Confidence 45789999999999886 578999999999999999999999999988754 999999998 78999999999999
Q ss_pred cEEEEEeCCe-eeeecCCCCHHHHHHHHHHHc
Q 010469 169 PTIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 169 P~~~~~~~g~-~~~y~g~~~~~~l~~~i~~~~ 199 (510)
||++++++|+ ..++.|.. .+.+.++|.+.+
T Consensus 80 Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~~ 110 (111)
T 2pu9_C 80 PTFKILKENSVVGEVTGAK-YDKLLEAIQAAR 110 (111)
T ss_dssp SEEEEESSSSEEEEEESSC-HHHHHHHHHHHH
T ss_pred eEEEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 9999998994 45788874 899999998764
No 56
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.79 E-value=2.2e-18 Score=137.64 Aligned_cols=101 Identities=21% Similarity=0.424 Sum_probs=87.6
Q ss_pred cEEe-ChhcHHHHH--hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 95 VVVL-KERNFSDVI--ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 95 v~~l-~~~~~~~~~--~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
+..+ +.++|++.+ .++++++|+||++||++|+.+.|.|+++++++. ++.++.||++++++++++|+|.++||+
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~----~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 78 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP----QAVFLEVDVHQCQGTAATNNISATPTF 78 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHHHHHHTTCCSSSEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC----CcEEEEEECccCHHHHHhcCCCcccEE
Confidence 4445 568899988 568999999999999999999999999999883 599999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHHcC
Q 010469 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 172 ~~~~~g~-~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
++|++|+ ..++.|. ..+.+.+|+.+.++
T Consensus 79 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~lg 107 (107)
T 1gh2_A 79 QFFRNKVRIDQYQGA-DAVGLEEKIKQHLE 107 (107)
T ss_dssp EEEETTEEEEEEESS-CHHHHHHHHHHHHC
T ss_pred EEEECCeEEEEEeCC-CHHHHHHHHHHhcC
Confidence 9999995 4578885 45569999988763
No 57
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.78 E-value=1.9e-18 Score=141.98 Aligned_cols=101 Identities=24% Similarity=0.422 Sum_probs=92.3
Q ss_pred cEEeCh-hcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEE
Q 010469 95 VVVLKE-RNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYF 173 (510)
Q Consensus 95 v~~l~~-~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~ 173 (510)
+..++. ++|++.+..+++++|.||++||++|+.+.|.|.++++.+. ++.|+.||++++++++++|+|.++||+++
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i 96 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP----TVKFAKVDADNNSEIVSKCRVLQLPTFII 96 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT----TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC----CCEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 788998 9999999889999999999999999999999999999873 49999999999999999999999999999
Q ss_pred EeCCee-eeecCCCCHHHHHHHHHHHcC
Q 010469 174 FVDGQH-KAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 174 ~~~g~~-~~y~g~~~~~~l~~~i~~~~~ 200 (510)
|++|+. ..+.| .+.+.+.++|.+.+.
T Consensus 97 ~~~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 97 ARSGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EETTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred EeCCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 999954 57888 688999999988763
No 58
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.78 E-value=2e-18 Score=139.10 Aligned_cols=103 Identities=23% Similarity=0.538 Sum_probs=92.4
Q ss_pred CcEEe-ChhcHHHHHhC----CCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcc
Q 010469 94 DVVVL-KERNFSDVIEN----NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGF 168 (510)
Q Consensus 94 ~v~~l-~~~~~~~~~~~----~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~ 168 (510)
.+..+ +.++|++.+.. +++++|.||++||++|+.+.|.|.++++.+.+ ++.++.||++++++++++|+|.++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~ 79 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG---KVIFLKVDVDAVAAVAEAAGITAM 79 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTTHHHHHHHTCCBS
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC---CeEEEEEECCchHHHHHHcCCCcc
Confidence 46777 56889998865 89999999999999999999999999999875 699999999999999999999999
Q ss_pred cEEEEEeCCe-eeeecCCCCHHHHHHHHHHHcC
Q 010469 169 PTIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 169 P~~~~~~~g~-~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
|+++++++|+ ..++.|. +.+.+.++|.+.+.
T Consensus 80 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 80 PTFHVYKDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp SEEEEEETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred cEEEEEECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 9999999995 4578898 99999999988763
No 59
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.78 E-value=2.4e-18 Score=136.86 Aligned_cols=102 Identities=28% Similarity=0.642 Sum_probs=92.5
Q ss_pred cEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEE
Q 010469 95 VVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYF 173 (510)
Q Consensus 95 v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~ 173 (510)
|..+++++|++.+ .++++++|.||++||++|+.+.|.|.++++.+++ ++.++.+|++++++++++++|.++|++++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG---KIAVYKLNTDEAPGIATQYNIRSIPTVLF 78 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC---ceEEEEEcCcchHHHHHhCCCCcccEEEE
Confidence 6788999999866 5678999999999999999999999999998876 69999999999999999999999999999
Q ss_pred EeCCee-eeecCCCCHHHHHHHHHHHc
Q 010469 174 FVDGQH-KAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 174 ~~~g~~-~~y~g~~~~~~l~~~i~~~~ 199 (510)
+++|+. .++.|..+.+.+.+++.+.+
T Consensus 79 ~~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 79 FKNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp EETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred EeCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 999954 57899999999999998753
No 60
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.78 E-value=8.8e-19 Score=143.65 Aligned_cols=106 Identities=26% Similarity=0.543 Sum_probs=94.1
Q ss_pred CCcEEeChhcHHH-HHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 93 KDVVVLKERNFSD-VIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 93 ~~v~~l~~~~~~~-~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
+.+..++.++|.+ ++.++++++|.||++||++|+.+.|.|.++++.+.+ ++.++.||++++++++++|+|.++|++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 79 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG---KVRAGKVDCQAYPQTCQKAGIKAYPSV 79 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEeCcCCHHHHHHcCCCccceE
Confidence 4588999999965 667789999999999999999999999999999876 699999999999999999999999999
Q ss_pred EEEeCC-eeeeecCC----CCHHHHHHHHHHHcCC
Q 010469 172 YFFVDG-QHKAYNGG----RTKDAIVTWIKKKIGP 201 (510)
Q Consensus 172 ~~~~~g-~~~~y~g~----~~~~~l~~~i~~~~~~ 201 (510)
++|++| ...++.|. .+.+.+.+|+.+.+..
T Consensus 80 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 80 KLYQYERAKKSIWEEQINSRDAKTIAALIYGKLET 114 (122)
T ss_dssp EEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred EEEeCCCccceeeccccCcCCHHHHHHHHHHHHHh
Confidence 999765 54566665 8999999999988754
No 61
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.78 E-value=2.2e-18 Score=138.86 Aligned_cols=103 Identities=27% Similarity=0.582 Sum_probs=92.9
Q ss_pred CCCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 92 DKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
.+....++.++|++.++++++++|+||++||++|+.+.|.|.++++++.+ +.++.||++++++++++|+|.++|++
T Consensus 8 ~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~----v~~~~vd~~~~~~~~~~~~v~~~Pt~ 83 (112)
T 1syr_A 8 HMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK----MVFIKVDVDEVSEVTEKENITSMPTF 83 (112)
T ss_dssp -CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred eeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC----CEEEEEECCCCHHHHHHcCCCcccEE
Confidence 34577899999999999899999999999999999999999999988753 99999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHHc
Q 010469 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 172 ~~~~~g~-~~~y~g~~~~~~l~~~i~~~~ 199 (510)
+++++|+ ..++.|. +.+.+.+||.+.+
T Consensus 84 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 84 KVYKNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEEETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred EEEECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 9999994 4578898 9999999998754
No 62
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.77 E-value=3.1e-18 Score=138.00 Aligned_cols=102 Identities=20% Similarity=0.454 Sum_probs=87.5
Q ss_pred cEEeCh-hcHHHHHhC---CCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccE
Q 010469 95 VVVLKE-RNFSDVIEN---NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (510)
Q Consensus 95 v~~l~~-~~~~~~~~~---~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~ 170 (510)
|..++. ++|++.+.. +++++|+||++||++|+.+.|.|.+++++++. .++.++.||++++++++++|+|.++|+
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~~vd~~~~~~~~~~~~v~~~Pt 79 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSN--SNVSFLSIDADENSEISELFEISAVPY 79 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGG--TTSEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCC--CCEEEEEEecccCHHHHHHcCCCcccE
Confidence 567887 999998875 89999999999999999999999999998644 259999999999999999999999999
Q ss_pred EEEEeCCee-eeecCCCCHHHHHHHHHHHc
Q 010469 171 IYFFVDGQH-KAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 171 ~~~~~~g~~-~~y~g~~~~~~l~~~i~~~~ 199 (510)
+++|++|+. .++.|. ..+.+.++|.+.+
T Consensus 80 ~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~ 108 (112)
T 3d6i_A 80 FIIIHKGTILKELSGA-DPKEYVSLLEDCK 108 (112)
T ss_dssp EEEEETTEEEEEECSC-CHHHHHHHHHHHH
T ss_pred EEEEECCEEEEEecCC-CHHHHHHHHHHHH
Confidence 999999954 578887 4556999998775
No 63
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.77 E-value=5.4e-18 Score=135.08 Aligned_cols=101 Identities=29% Similarity=0.654 Sum_probs=90.0
Q ss_pred cEEeCh-hcHHHHHh--CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 95 VVVLKE-RNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 95 v~~l~~-~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
+..++. ++|++.+. ++++++|.||++||++|+.+.|.|.++++.+++ ++.++.||++++++++++++|.++|++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 78 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD---NVVVLKVDVDECEDIAMEYNISSMPTF 78 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC---CeEEEEEeccchHHHHHHcCCCcccEE
Confidence 456777 88998886 789999999999999999999999999998865 699999999999999999999999999
Q ss_pred EEEeCCe-eeeecCCCCHHHHHHHHHHHc
Q 010469 172 YFFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 172 ~~~~~g~-~~~y~g~~~~~~l~~~i~~~~ 199 (510)
+++++|+ ..++.| .+.+.+.+++.+.+
T Consensus 79 ~~~~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 79 VFLKNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp EEEETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred EEEcCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 9999994 457888 78899999998653
No 64
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.77 E-value=3.3e-18 Score=155.65 Aligned_cols=111 Identities=23% Similarity=0.562 Sum_probs=100.5
Q ss_pred ccCCCCcEEeChhcHHH-HHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCc
Q 010469 89 EIDDKDVVVLKERNFSD-VIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQG 167 (510)
Q Consensus 89 ~~~~~~v~~l~~~~~~~-~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~ 167 (510)
......+..+|+++|++ +++++++++|+|||+||++|+.+.|.|.++++++++ .+.++.||+++++.++++|+|.+
T Consensus 8 ~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~---~v~~~~vd~d~~~~l~~~~~v~~ 84 (222)
T 3dxb_A 8 HPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG---KLTVAKLNIDQNPGTAPKYGIRG 84 (222)
T ss_dssp -CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCTTTGGGGTCCS
T ss_pred CCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC---CcEEEEEECCCCHHHHHHcCCCc
Confidence 44556789999999998 467789999999999999999999999999999977 69999999999999999999999
Q ss_pred ccEEEEEeCCe-eeeecCCCCHHHHHHHHHHHcCCC
Q 010469 168 FPTIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 168 ~P~~~~~~~g~-~~~y~g~~~~~~l~~~i~~~~~~~ 202 (510)
+||+++|++|+ ..++.|..+.+.+.+|+.+.+...
T Consensus 85 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 85 IPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp BSEEEEEETTEEEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred CCEEEEEECCeEEEEeccccChHHHHHHHHhhcccc
Confidence 99999999994 458999999999999999998654
No 65
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.77 E-value=2.8e-18 Score=140.37 Aligned_cols=108 Identities=30% Similarity=0.578 Sum_probs=95.2
Q ss_pred cCCCCcEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcc
Q 010469 90 IDDKDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGF 168 (510)
Q Consensus 90 ~~~~~v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~ 168 (510)
.....+..++..+|...+ ..+++++|.||++||++|+.+.|.|.++++.+++ ++.++.||+++++.++++|+|.++
T Consensus 9 ~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~i~~~ 85 (121)
T 2i1u_A 9 SEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT---DLTVAKLDVDTNPETARNFQVVSI 85 (121)
T ss_dssp ---CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTCHHHHHHTTCCSS
T ss_pred hhcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEECCCCHHHHHhcCCCcC
Confidence 345578999999999754 6788999999999999999999999999999876 699999999999999999999999
Q ss_pred cEEEEEeCCee-eeecCCCCHHHHHHHHHHHcC
Q 010469 169 PTIYFFVDGQH-KAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 169 P~~~~~~~g~~-~~y~g~~~~~~l~~~i~~~~~ 200 (510)
|++++|++|+. .++.|..+.+.+.+||.+.++
T Consensus 86 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 86 PTLILFKDGQPVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHTCSCCC
T ss_pred CEEEEEECCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 99999999954 689999999999999977653
No 66
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.77 E-value=1.3e-18 Score=143.96 Aligned_cols=96 Identities=22% Similarity=0.403 Sum_probs=85.8
Q ss_pred ChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEEeCCe
Q 010469 99 KERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQ 178 (510)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~~g~ 178 (510)
+++.++....++++++|+||++||++|+++.|.|+++++++++ ++.++.||++++++++++|+|.++|++++|++|+
T Consensus 31 ~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~ 107 (128)
T 3ul3_B 31 GSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK---RIYLLKVDLDKNESLARKFSVKSLPTIILLKNKT 107 (128)
T ss_dssp CCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG---GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTE
T ss_pred CccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCE
Confidence 3444555556789999999999999999999999999999986 7999999999999999999999999999999994
Q ss_pred -eeeecCCCCHHHHHHHHHH
Q 010469 179 -HKAYNGGRTKDAIVTWIKK 197 (510)
Q Consensus 179 -~~~y~g~~~~~~l~~~i~~ 197 (510)
..++.|..+.+.+.+||++
T Consensus 108 ~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 108 MLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEEEESSCCCHHHHHHHHTT
T ss_pred EEEEecCCCCHHHHHHHHHh
Confidence 5689999999999999864
No 67
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.77 E-value=2.9e-18 Score=162.84 Aligned_cols=107 Identities=25% Similarity=0.530 Sum_probs=98.5
Q ss_pred CCCcEEeChhcHHHHHhC--CCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCccc
Q 010469 92 DKDVVVLKERNFSDVIEN--NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFP 169 (510)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~--~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 169 (510)
.+.|..++.++|++++.. +++++|+||++||+||+.+.|.|+++++++++ ++.|+.|||+++++++++|+|.++|
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~P 82 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG---QFILAKLDCDAEQMIAAQFGLRAIP 82 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS---SSEEEEEETTTCHHHHHTTTCCSSS
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC---CeEEEEEeCccCHHHHHHcCCCCCC
Confidence 456899999999998864 79999999999999999999999999999986 6999999999999999999999999
Q ss_pred EEEEEeCCee-eeecCCCCHHHHHHHHHHHcCC
Q 010469 170 TIYFFVDGQH-KAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 170 ~~~~~~~g~~-~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
|+++|++|+. .++.|..+.+.+..|+...++.
T Consensus 83 t~~~~~~G~~~~~~~g~~~~~~l~~~l~~~lp~ 115 (287)
T 3qou_A 83 TVYLFQNGQPVDGFQGPQPEEAIRALLDXVLPR 115 (287)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred eEEEEECCEEEEEeeCCCCHHHHHHHHHHHcCC
Confidence 9999999954 5799999999999999998844
No 68
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.76 E-value=1.2e-18 Score=142.50 Aligned_cols=108 Identities=37% Similarity=0.797 Sum_probs=94.0
Q ss_pred CCCCcEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhc--CCCeEEEEEeCcccHHHHHhCCCCc
Q 010469 91 DDKDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSA--NESVVLAKVDATEENELAHEYDVQG 167 (510)
Q Consensus 91 ~~~~v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~--~~~v~~~~vd~~~~~~~~~~~~v~~ 167 (510)
..+.|..|++++|++.+ .++++++|+|||+||++|+++.|.|+++++++++. ...+.++.|||++++ +++ +|.+
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~ 81 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQG 81 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSS
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCc
Confidence 45678999999999875 67899999999999999999999999999999752 126999999998876 565 9999
Q ss_pred ccEEEEEeCC-e--eeeecCCCCHHHHHHHHHHHcCC
Q 010469 168 FPTIYFFVDG-Q--HKAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 168 ~P~~~~~~~g-~--~~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
+||+++|++| . ..+|.|..+.+.|.+||.+.+..
T Consensus 82 ~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 82 FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCc
Confidence 9999999877 5 67899999999999999988754
No 69
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.76 E-value=5.8e-18 Score=134.65 Aligned_cols=96 Identities=27% Similarity=0.651 Sum_probs=87.1
Q ss_pred ChhcHHHHHh--CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEEeC
Q 010469 99 KERNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVD 176 (510)
Q Consensus 99 ~~~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~~ 176 (510)
+.++|++.+. ++++++|.||++||++|+.+.|.|+++++.+++ +.++.||++++++++++|+|.++|++++|++
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 82 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN----VIFLEVDVDDCQDVASESEVKSMPTFQFFKK 82 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT----SEEEEEETTTCHHHHHHTTCCBSSEEEEEET
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC----eEEEEEEhhhhHHHHHHcCCCcCcEEEEEEC
Confidence 5678888887 789999999999999999999999999998854 9999999999999999999999999999999
Q ss_pred Ce-eeeecCCCCHHHHHHHHHHHc
Q 010469 177 GQ-HKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 177 g~-~~~y~g~~~~~~l~~~i~~~~ 199 (510)
|+ ..++.|. +.+.+.+++.+.+
T Consensus 83 g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 83 GQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp TEEEEEEESS-CHHHHHHHHHHHC
T ss_pred CeEEEEEeCC-CHHHHHHHHHHhC
Confidence 94 4578898 9999999998764
No 70
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.76 E-value=8.3e-19 Score=146.17 Aligned_cols=111 Identities=34% Similarity=0.713 Sum_probs=96.9
Q ss_pred CCCCcEEeChhcHHHHHh-CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCccc
Q 010469 91 DDKDVVVLKERNFSDVIE-NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFP 169 (510)
Q Consensus 91 ~~~~v~~l~~~~~~~~~~-~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 169 (510)
+.+.|..+++++|+..+. .+++++|+||++||++|+.+.|.|.++++.+++. .++.++.||+++++.++++|+|.++|
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~P 83 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQ-KDLVIAKMDATANDITNDQYKVEGFP 83 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTS-SSEEEEEECTTTSCCCCSSCCCSSSS
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CCEEEEEecCCcCHHHHhhcCCCcCC
Confidence 345789999999998775 4899999999999999999999999999999752 26999999999999999999999999
Q ss_pred EEEEEeCCe---eeeec-CCCCHHHHHHHHHHHcCCC
Q 010469 170 TIYFFVDGQ---HKAYN-GGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 170 ~~~~~~~g~---~~~y~-g~~~~~~l~~~i~~~~~~~ 202 (510)
|+++|++|. ...|. |..+.+.|.+||.+.+...
T Consensus 84 t~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 84 TIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp EEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred EEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcccc
Confidence 999998772 34678 5589999999999998754
No 71
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.76 E-value=3.4e-18 Score=144.94 Aligned_cols=99 Identities=19% Similarity=0.339 Sum_probs=89.1
Q ss_pred eChhcHHHHH--hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEEe
Q 010469 98 LKERNFSDVI--ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFV 175 (510)
Q Consensus 98 l~~~~~~~~~--~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~ 175 (510)
.+.++|++.+ .++++++|+|||+||++|+.+.|.|+++++++++ .+.++.||++++++++++|+|.++||+++++
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~---~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~ 85 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK---MAAIYLVDVDQTAVYTQYFDISYIPSTVFFF 85 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT---TEEEEEEETTTCCHHHHHTTCCSSSEEEEEE
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC---ceEEEEEECCcCHHHHHHcCCCccCeEEEEE
Confidence 3678899877 4589999999999999999999999999998866 6999999999999999999999999999999
Q ss_pred CCee----------eeecC-CCCHHHHHHHHHHHc
Q 010469 176 DGQH----------KAYNG-GRTKDAIVTWIKKKI 199 (510)
Q Consensus 176 ~g~~----------~~y~g-~~~~~~l~~~i~~~~ 199 (510)
+|+. .++.| ..+.+.+.+++...+
T Consensus 86 ~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 86 NGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp TTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred CCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 9954 47889 889999999998765
No 72
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.76 E-value=8.2e-18 Score=138.23 Aligned_cols=103 Identities=25% Similarity=0.527 Sum_probs=91.3
Q ss_pred CCCcEEeChhcHHHHHh--CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc-ccHHHHHhCCCCcc
Q 010469 92 DKDVVVLKERNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-EENELAHEYDVQGF 168 (510)
Q Consensus 92 ~~~v~~l~~~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-~~~~~~~~~~v~~~ 168 (510)
.+.+..++.++|.+.+. ++++++|.||++||++|+.+.|.|+++++++++ +.++.||++ ++++++++|+|.++
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~----~~~~~vd~~~~~~~~~~~~~v~~~ 92 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD----VIFLKLDCNQENKTLAKELGIRVV 92 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEECSSTTHHHHHHHCCSSS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC----CEEEEEecCcchHHHHHHcCCCee
Confidence 45688999999998875 688999999999999999999999999988754 899999998 68999999999999
Q ss_pred cEEEEEeCCee-eeecCCCCHHHHHHHHHHHc
Q 010469 169 PTIYFFVDGQH-KAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 169 P~~~~~~~g~~-~~y~g~~~~~~l~~~i~~~~ 199 (510)
||++++++|+. .++.|.. .+.+.+++.+..
T Consensus 93 Pt~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 93 PTFKILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp SEEEEEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred eEEEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 99999999954 5778876 899999998764
No 73
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.76 E-value=1.2e-17 Score=137.15 Aligned_cols=104 Identities=29% Similarity=0.617 Sum_probs=90.9
Q ss_pred CCCCcEEe-ChhcHHHHHh----CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCC
Q 010469 91 DDKDVVVL-KERNFSDVIE----NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDV 165 (510)
Q Consensus 91 ~~~~v~~l-~~~~~~~~~~----~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v 165 (510)
+...+..+ +.++|++.+. ++++++|+||++||++|+.+.|.|.++++++. ++.++.||++++++++++|+|
T Consensus 14 ~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~vd~d~~~~l~~~~~v 89 (124)
T 1xfl_A 14 EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP----NVLFLKVDTDELKSVASDWAI 89 (124)
T ss_dssp CCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS----SEEEEEEETTTSHHHHHHTTC
T ss_pred CCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CcEEEEEECccCHHHHHHcCC
Confidence 34457777 6788998775 48999999999999999999999999998874 499999999999999999999
Q ss_pred CcccEEEEEeCCee-eeecCCCCHHHHHHHHHHHc
Q 010469 166 QGFPTIYFFVDGQH-KAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 166 ~~~P~~~~~~~g~~-~~y~g~~~~~~l~~~i~~~~ 199 (510)
.++|++++|++|+. .++.| .+.+.+.++|.+.+
T Consensus 90 ~~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 90 QAMPTFMFLKEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp CSSSEEEEEETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred CccCEEEEEECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 99999999999954 57788 58899999998765
No 74
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.76 E-value=6.7e-18 Score=156.04 Aligned_cols=111 Identities=45% Similarity=0.862 Sum_probs=103.4
Q ss_pred CCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEE
Q 010469 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~ 172 (510)
..+..++.++|++.+..+++++|+||++||++|+.+.|.|.++++.+++.+..+.++.||++++++++++|+|.++||++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 209 (241)
T 3idv_A 130 EVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLK 209 (241)
T ss_dssp CSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEE
Confidence 46888999999999988999999999999999999999999999999875556999999999999999999999999999
Q ss_pred EEeCCeeeeecCCCCHHHHHHHHHHHcCCCc
Q 010469 173 FFVDGQHKAYNGGRTKDAIVTWIKKKIGPGI 203 (510)
Q Consensus 173 ~~~~g~~~~y~g~~~~~~l~~~i~~~~~~~~ 203 (510)
+|++|+...|.|.++.+.+.+||.+.+++.+
T Consensus 210 ~~~~g~~~~~~g~~~~~~l~~~l~~~~~~~~ 240 (241)
T 3idv_A 210 IFRKGRPYDYNGPREKYGIVDYMIEQSGAAA 240 (241)
T ss_dssp EEETTEEEECCSCCSHHHHHHHHHHHTTCTT
T ss_pred EEECCeEEEecCCCCHHHHHHHHHhhhCCCC
Confidence 9999988789999999999999999987753
No 75
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.75 E-value=1.1e-17 Score=137.13 Aligned_cols=103 Identities=27% Similarity=0.550 Sum_probs=92.5
Q ss_pred CCcEEeChhcHHHHHh----CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcc
Q 010469 93 KDVVVLKERNFSDVIE----NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGF 168 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~~----~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~ 168 (510)
..+..++.++|++.+. .+++++|.||++||++|+.+.|.|.++++++.+ +.++.||++++++++++|+|.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----~~~~~vd~~~~~~~~~~~~v~~~ 88 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN----AVFLKVDVDELKPIAEQFSVEAM 88 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTCHHHHHHTTCCSS
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----cEEEEEECCCCHHHHHHcCCCcc
Confidence 3567789999998774 488999999999999999999999999988754 99999999999999999999999
Q ss_pred cEEEEEeCCee-eeecCCCCHHHHHHHHHHHcC
Q 010469 169 PTIYFFVDGQH-KAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 169 P~~~~~~~g~~-~~y~g~~~~~~l~~~i~~~~~ 200 (510)
|++++|++|+. .++.|.. .+.+.+||.+.+.
T Consensus 89 Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 89 PTFLFMKEGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp SEEEEEETTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred cEEEEEeCCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 99999999954 6789998 9999999998774
No 76
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.75 E-value=1.3e-17 Score=132.34 Aligned_cols=99 Identities=31% Similarity=0.668 Sum_probs=87.7
Q ss_pred EEeCh-hcHHHHHh--CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEE
Q 010469 96 VVLKE-RNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (510)
Q Consensus 96 ~~l~~-~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~ 172 (510)
..++. ++|++.+. ++++++|.||++||++|+.+.|.|.++++.+. ++.++.||++++++++++++|.++|+++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 77 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP----EVEFAKVDVDQNEEAAAKYSVTAMPTFV 77 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC----CCEEEEEeccCCHHHHHHcCCccccEEE
Confidence 45566 88999887 68999999999999999999999999998874 4999999999999999999999999999
Q ss_pred EEeCCee-eeecCCCCHHHHHHHHHHHc
Q 010469 173 FFVDGQH-KAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 173 ~~~~g~~-~~y~g~~~~~~l~~~i~~~~ 199 (510)
++++|+. .++.| .+.+.+.+|+.+.+
T Consensus 78 ~~~~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 78 FIKDGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp EEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EEeCCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 9999954 57888 68999999998753
No 77
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.75 E-value=9.4e-18 Score=141.05 Aligned_cols=106 Identities=25% Similarity=0.534 Sum_probs=82.2
Q ss_pred CCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEE
Q 010469 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~ 172 (510)
+.+..+++++|...+.+++.++|+||++||++|+.+.|.|+++++++.+ ++.|+.||++++++++++|+|.++|+++
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 109 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAG---RLKVVKVNVDEHPGLAARYGVRSVPTLV 109 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccC---ceEEEEEECCCCHHHHHHCCCCccCEEE
Confidence 5688899999998876555599999999999999999999999999876 6999999999999999999999999999
Q ss_pred EEeCCe-eeeecCCCCHHHHHHHHHHHcCC
Q 010469 173 FFVDGQ-HKAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 173 ~~~~g~-~~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
+|++|+ ...+.|..+.+.+.+||.+.+..
T Consensus 110 ~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 110 LFRRGAPVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred EEeCCcEEEEEeCCCCHHHHHHHHHHHHcc
Confidence 999995 46789999999999999988753
No 78
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.75 E-value=7.4e-18 Score=136.96 Aligned_cols=100 Identities=29% Similarity=0.637 Sum_probs=89.4
Q ss_pred CcEEeCh-hcHHHHHh--CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccE
Q 010469 94 DVVVLKE-RNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (510)
Q Consensus 94 ~v~~l~~-~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~ 170 (510)
.+..++. ++|++.+. ++++++|.||++||++|+.+.|.|.++++++ ++.++.||++++++++++|+|.++|+
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-----~~~~~~vd~~~~~~~~~~~~v~~~Pt 88 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY-----DAIFVKVDVDKLEETARKYNISAMPT 88 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-----SSEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-----CcEEEEEECCccHHHHHHcCCCccce
Confidence 4788888 89999887 7899999999999999999999999998776 48999999999999999999999999
Q ss_pred EEEEeCCee-eeecCCCCHHHHHHHHHHHc
Q 010469 171 IYFFVDGQH-KAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 171 ~~~~~~g~~-~~y~g~~~~~~l~~~i~~~~ 199 (510)
++++++|+. .++.| .+.+.+.++|.+.+
T Consensus 89 ~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 89 FIAIKNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEEEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EEEEeCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 999999954 57888 68899999998753
No 79
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.75 E-value=3.4e-18 Score=137.22 Aligned_cols=101 Identities=20% Similarity=0.291 Sum_probs=88.3
Q ss_pred EEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEEe
Q 010469 96 VVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFV 175 (510)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~ 175 (510)
..++.++| +.+.++++++|+||++||++|+.+.|.|+++++.+. ++.++.||++++++++++++|.++|++++|+
T Consensus 6 ~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~----~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 80 (110)
T 2l6c_A 6 DITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP----QVAISSVDSEARPELMKELGFERVPTLVFIR 80 (110)
T ss_dssp BCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT----TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEE
T ss_pred ecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC----CcEEEEEcCcCCHHHHHHcCCcccCEEEEEE
Confidence 45678899 667778999999999999999999999999988764 4899999999999999999999999999999
Q ss_pred CC-eeeeecCCCCHHHHHHHHHHHcCC
Q 010469 176 DG-QHKAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 176 ~g-~~~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
+| ...++.|..+.+.|.+++....++
T Consensus 81 ~G~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 81 DGKVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp SSSEEEEEESCCCHHHHHHHHHTC---
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 99 456899999999999999887654
No 80
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.75 E-value=1.5e-18 Score=142.12 Aligned_cols=104 Identities=23% Similarity=0.597 Sum_probs=88.6
Q ss_pred CCcEEeChhcHHHH-HhCCCeEEEEEECCCCh--------------HHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccH
Q 010469 93 KDVVVLKERNFSDV-IENNKFVMVEFYAPWCG--------------HCQALAPEYAAAATELKSANESVVLAKVDATEEN 157 (510)
Q Consensus 93 ~~v~~l~~~~~~~~-~~~~~~~~v~f~a~wC~--------------~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~ 157 (510)
+.+..+++++|++. +.++++++|.|||+||+ +|+.+.|.|+++++++++ ++.++.||+++++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~---~~~~~~vd~d~~~ 79 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG---KLTVAKLNIDQNP 79 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC----------CEEEEEETTSCT
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC---CeEEEEEECCCCH
Confidence 35888999999865 46789999999999999 999999999999998876 6999999999999
Q ss_pred HHHHhCCCCcccEEEEEeCCe-eeeecCCCCHHHHHHHHHHHc
Q 010469 158 ELAHEYDVQGFPTIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 158 ~~~~~~~v~~~P~~~~~~~g~-~~~y~g~~~~~~l~~~i~~~~ 199 (510)
+++++|+|.++|++++|++|+ ..++.|..+.+.+.+||.+.+
T Consensus 80 ~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 80 GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp TTGGGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHHHHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 999999999999999999994 468999999999999998765
No 81
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.75 E-value=7.8e-18 Score=135.93 Aligned_cols=94 Identities=29% Similarity=0.552 Sum_probs=84.7
Q ss_pred ChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEEeCCe
Q 010469 99 KERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQ 178 (510)
Q Consensus 99 ~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~~g~ 178 (510)
+.++|+++++++++++|.||++||++|+.+.|.|.++++++.+ +.++.||++++++++++|+|.++|+++++++|+
T Consensus 19 ~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~----v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 94 (114)
T 2oe3_A 19 NLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD----VRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQ 94 (114)
T ss_dssp SHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT----SEEEEEETTTCHHHHHHTTCCSBSEEEEEETTE
T ss_pred CHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----CEEEEEECCCCHHHHHHCCCCcccEEEEEeCCe
Confidence 3466788888899999999999999999999999999988754 999999999999999999999999999999995
Q ss_pred e-eeecCCCCHHHHHHHHHH
Q 010469 179 H-KAYNGGRTKDAIVTWIKK 197 (510)
Q Consensus 179 ~-~~y~g~~~~~~l~~~i~~ 197 (510)
. .++.|.. .+.+.++|.+
T Consensus 95 ~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 95 LIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEEEEESSC-HHHHHHHHHT
T ss_pred EEEEEeCCC-HHHHHHHHHh
Confidence 4 5788988 9999998864
No 82
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.75 E-value=2.7e-18 Score=139.80 Aligned_cols=101 Identities=14% Similarity=0.260 Sum_probs=85.6
Q ss_pred CCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeC----cccHHHHHhCCCCcc
Q 010469 93 KDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA----TEENELAHEYDVQGF 168 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~----~~~~~~~~~~~v~~~ 168 (510)
..+..++.++|.+.+.++++++|+|||+||++|+++.|.|.++++++.. .+.++.++. +..+.++++|+|.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~i~~~ 88 (118)
T 1zma_A 12 KDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA---HIYFINSEEPSQLNDLQAFRSRYGIPTV 88 (118)
T ss_dssp TTSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC---CCEEEETTCGGGHHHHHHHHHHHTCCSS
T ss_pred hhhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC---eEEEEECCCcCcHHHHHHHHHHcCCCCC
Confidence 3577889999999998899999999999999999999999999988754 566664332 334578999999999
Q ss_pred cEEEEEeCCe-eeeecCCCCHHHHHHHHH
Q 010469 169 PTIYFFVDGQ-HKAYNGGRTKDAIVTWIK 196 (510)
Q Consensus 169 P~~~~~~~g~-~~~y~g~~~~~~l~~~i~ 196 (510)
||+++|++|+ ..++.|..+.+.|.+||.
T Consensus 89 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 89 PGFVHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp CEEEEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred CeEEEEECCEEEEEecCCCCHHHHHHHhh
Confidence 9999999994 468899999999999985
No 83
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.75 E-value=3.6e-18 Score=142.50 Aligned_cols=104 Identities=18% Similarity=0.332 Sum_probs=92.2
Q ss_pred CCCcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeC---------cccHHHHHh
Q 010469 92 DKDVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA---------TEENELAHE 162 (510)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~---------~~~~~~~~~ 162 (510)
.+.+..++.++|++.+.+ +++|+|||+||++|+.+.|.|.++++++ ++.++.||+ +++++++++
T Consensus 15 ~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~-----~v~~~~vd~~~~~~~~~~d~~~~l~~~ 87 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEV-----DVPIVMFIWGSLIGERELSAARLEMNK 87 (135)
T ss_dssp TTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTC-----CSCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHC-----CCEEEEEECCCchhhhhhhhhHHHHHH
Confidence 456889999999999876 9999999999999999999999998765 288999999 888999999
Q ss_pred CCCCcccEEEEEeCCe-eeeecCCCCHHHHHHHHHHHcCCC
Q 010469 163 YDVQGFPTIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 163 ~~v~~~P~~~~~~~g~-~~~y~g~~~~~~l~~~i~~~~~~~ 202 (510)
|+|.++||+++|++|+ ..++.|..+.+.+..++++.+.++
T Consensus 88 ~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 88 AGVEGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp HTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC---
T ss_pred cCCceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhCCC
Confidence 9999999999999994 468999999999999999988664
No 84
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.75 E-value=1.4e-17 Score=142.21 Aligned_cols=105 Identities=23% Similarity=0.514 Sum_probs=92.8
Q ss_pred CCcEEeC-hhcHHHHHhC--CCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCccc
Q 010469 93 KDVVVLK-ERNFSDVIEN--NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFP 169 (510)
Q Consensus 93 ~~v~~l~-~~~~~~~~~~--~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 169 (510)
+.+..++ .++|++++.+ +++++|+||++||++|+.+.|.|.++++.+. ++.|+.||++++++++++|+|.++|
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~~~~~~l~~~~~v~~~P 87 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP----QVSFVKLEAEGVPEVSEKYEISSVP 87 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHHHHHHTTCCSSS
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC----CeEEEEEECCCCHHHHHHcCCCCCC
Confidence 4577776 5899998876 8999999999999999999999999999873 5999999999999999999999999
Q ss_pred EEEEEeCCee-eeecCCCCHHHHHHHHHHHcCCC
Q 010469 170 TIYFFVDGQH-KAYNGGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 170 ~~~~~~~g~~-~~y~g~~~~~~l~~~i~~~~~~~ 202 (510)
++++|++|+. .++.| .+.+.+.+||.+.++..
T Consensus 88 t~~~~~~G~~~~~~~G-~~~~~l~~~i~~~l~~~ 120 (153)
T 2wz9_A 88 TFLFFKNSQKIDRLDG-AHAPELTKKVQRHASSG 120 (153)
T ss_dssp EEEEEETTEEEEEEES-SCHHHHHHHHHHHSCTT
T ss_pred EEEEEECCEEEEEEeC-CCHHHHHHHHHHHhccc
Confidence 9999999955 46777 57889999999998653
No 85
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.75 E-value=5.1e-18 Score=139.88 Aligned_cols=95 Identities=18% Similarity=0.219 Sum_probs=85.7
Q ss_pred HHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEe--CcccHHHHHhCCCCcccEEEEEe-CCe-ee
Q 010469 105 DVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVD--ATEENELAHEYDVQGFPTIYFFV-DGQ-HK 180 (510)
Q Consensus 105 ~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd--~~~~~~~~~~~~v~~~P~~~~~~-~g~-~~ 180 (510)
....++++++|+||++||++|+.+.|.|.++++.+++ ++.++.|| ++++++++++|+|.++|++++|+ +|+ ..
T Consensus 21 ~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~---~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~ 97 (126)
T 2l57_A 21 EEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG---KFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFY 97 (126)
T ss_dssp TTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS---SCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEE
T ss_pred HHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC---CeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEE
Confidence 4445788999999999999999999999999998864 69999999 99999999999999999999998 884 46
Q ss_pred eecCCCCHHHHHHHHHHHcCCC
Q 010469 181 AYNGGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 181 ~y~g~~~~~~l~~~i~~~~~~~ 202 (510)
++.|..+.+.+.++|.+.+.+.
T Consensus 98 ~~~G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 98 VHQGLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp EEESCCCHHHHHHHHHHHCCCC
T ss_pred EecCCCCHHHHHHHHHHHhccc
Confidence 7899999999999999998664
No 86
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.74 E-value=1.4e-17 Score=134.17 Aligned_cols=98 Identities=13% Similarity=0.287 Sum_probs=82.0
Q ss_pred CCcEEeChhcHHHHHhC-CC--eEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCccc
Q 010469 93 KDVVVLKERNFSDVIEN-NK--FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFP 169 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~~~-~~--~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 169 (510)
+.+.+++.++|.+.+.+ ++ +++|.|||+||++|+.+.|.|+++++++.+ +.|++||+++. +.+|+|+++|
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~----v~f~kvd~d~~---~~~~~v~~~P 75 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE----TKFVKAIVNSC---IQHYHDNCLP 75 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT----SEEEEEEGGGT---STTCCGGGCS
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC----CEEEEEEhHHh---HHHCCCCCCC
Confidence 35788999999987643 33 999999999999999999999999998754 99999999875 5899999999
Q ss_pred EEEEEeCCe-eeeecCCC-------CHHHHHHHHHH
Q 010469 170 TIYFFVDGQ-HKAYNGGR-------TKDAIVTWIKK 197 (510)
Q Consensus 170 ~~~~~~~g~-~~~y~g~~-------~~~~l~~~i~~ 197 (510)
|+++|++|+ ..++.|.. +.+.+..+|.+
T Consensus 76 T~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 76 TIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp EEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred EEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 999999994 45777754 56777777754
No 87
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.74 E-value=2.2e-18 Score=144.20 Aligned_cols=111 Identities=14% Similarity=0.168 Sum_probs=81.8
Q ss_pred CcEEeChhcHHHHHhCCCeEEEEEECCC--ChHHhhhhHHHHHHHHHHhhcCCCeE--EEEEeCcccHHHHHhCCCCccc
Q 010469 94 DVVVLKERNFSDVIENNKFVMVEFYAPW--CGHCQALAPEYAAAATELKSANESVV--LAKVDATEENELAHEYDVQGFP 169 (510)
Q Consensus 94 ~v~~l~~~~~~~~~~~~~~~~v~f~a~w--C~~C~~~~p~~~~~~~~~~~~~~~v~--~~~vd~~~~~~~~~~~~v~~~P 169 (510)
.+..++.++|++.+.+++.++|.||++| |++|+.+.|.|+++++++ + ++. |+.||++++++++++|+|+++|
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~---~v~~~~~~Vd~d~~~~la~~~~V~~iP 93 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P---QFDWQVAVADLEQSEAIGDRFNVRRFP 93 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T---TSCCEEEEECHHHHHHHHHTTTCCSSS
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c---ccceeEEEEECCCCHHHHHhcCCCcCC
Confidence 5788999999999987778899999987 999999999999999988 5 577 9999999999999999999999
Q ss_pred EEEEEeCCe-eeeecCCCCHHHHHHHHHHHcCCCcccccc
Q 010469 170 TIYFFVDGQ-HKAYNGGRTKDAIVTWIKKKIGPGIYNITT 208 (510)
Q Consensus 170 ~~~~~~~g~-~~~y~g~~~~~~l~~~i~~~~~~~~~~i~~ 208 (510)
|+++|++|+ ..++.|..+.+.|.+||.+.+..+...+.+
T Consensus 94 T~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~~~~~~~ 133 (142)
T 2es7_A 94 ATLVFTDGKLRGALSGIHPWAELLTLMRSIVDTPAAQETV 133 (142)
T ss_dssp EEEEESCC----CEESCCCHHHHHHHHHHHHC--------
T ss_pred eEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhcccccCCCc
Confidence 999999994 468999999999999999999877655443
No 88
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.74 E-value=1.4e-17 Score=139.92 Aligned_cols=98 Identities=21% Similarity=0.324 Sum_probs=83.8
Q ss_pred ChhcHHHHHh--CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEEeC
Q 010469 99 KERNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVD 176 (510)
Q Consensus 99 ~~~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~~ 176 (510)
+.++|++.+. ++++++|+|||+||++|+.+.|.|+++++++++ ++.++.||++++++++++|+|.++||+++|++
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~ 86 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN---FAVIYLVDITEVPDFNKMYELYDPCTVMFFFR 86 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT---TEEEEEEETTTCCTTTTSSCSCSSCEEEEEET
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC---CeEEEEEccccCHHHHHHcCCCCCCEEEEEEC
Confidence 4778887654 589999999999999999999999999999876 69999999999999999999999999999999
Q ss_pred Ceee----------eecCCCC-HHHHHHHHHHHc
Q 010469 177 GQHK----------AYNGGRT-KDAIVTWIKKKI 199 (510)
Q Consensus 177 g~~~----------~y~g~~~-~~~l~~~i~~~~ 199 (510)
|+.. +..|..+ .+.+.++|.+.+
T Consensus 87 G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~ 120 (142)
T 1qgv_A 87 NKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120 (142)
T ss_dssp TEEEEEECC------CCSCCSCHHHHHHHHHHHH
T ss_pred CcEEEEecCCCCcceeeeecCcHHHHHHHHHHHH
Confidence 9544 2445554 788888887665
No 89
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.74 E-value=1.7e-17 Score=135.66 Aligned_cols=103 Identities=27% Similarity=0.577 Sum_probs=91.6
Q ss_pred CcEEeCh-hcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEE
Q 010469 94 DVVVLKE-RNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (510)
Q Consensus 94 ~v~~l~~-~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~ 172 (510)
.+..++. ++|++.+.++++++|.||++||++|+.+.|.|.++++.+++. ++.++.||++++++++++|+|.++|+++
T Consensus 16 ~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~--~v~~~~vd~d~~~~~~~~~~v~~~Pt~~ 93 (121)
T 2j23_A 16 SVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD--KVGFYKVDVDEQSQIAQEVGIRAMPTFV 93 (121)
T ss_dssp CEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH--HSEEEEEETTTCHHHHHHHTCCSSSEEE
T ss_pred ceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC--cEEEEEEECcCCHHHHHHcCCCcccEEE
Confidence 4555555 889999988899999999999999999999999999988762 4999999999999999999999999999
Q ss_pred EEeCCe-eeeecCCCCHHHHHHHHHHHc
Q 010469 173 FFVDGQ-HKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 173 ~~~~g~-~~~y~g~~~~~~l~~~i~~~~ 199 (510)
+|++|+ ..++.|. +.+.+.+||.+.+
T Consensus 94 ~~~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 94 FFKNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred EEECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 999995 4578898 9999999998765
No 90
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.73 E-value=3.4e-17 Score=137.46 Aligned_cols=105 Identities=22% Similarity=0.521 Sum_probs=91.7
Q ss_pred CCCcEEeC-hhcHHHHHh----CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCC
Q 010469 92 DKDVVVLK-ERNFSDVIE----NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQ 166 (510)
Q Consensus 92 ~~~v~~l~-~~~~~~~~~----~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~ 166 (510)
...+..++ .++|++.+. ++++++|+||++||++|+.+.|.|+++++++. ++.++.||++++++++++|+|.
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~v~~~~~~~~~~~~~v~ 98 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP----SLMFLVIDVDELSDFSASWEIK 98 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHHHHHHTTCC
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CCEEEEEeCcccHHHHHHcCCC
Confidence 44566665 789998773 57899999999999999999999999998874 4999999999999999999999
Q ss_pred cccEEEEEeCCee-eeecCCCCHHHHHHHHHHHcCC
Q 010469 167 GFPTIYFFVDGQH-KAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 167 ~~P~~~~~~~g~~-~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
++|+++++++|+. .++.|. +.+.+.++|.+.+..
T Consensus 99 ~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 99 ATPTFFFLRDGQQVDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp EESEEEEEETTEEEEEEESC-CHHHHHHHHHHHHHT
T ss_pred cccEEEEEcCCeEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 9999999999954 578888 889999999988754
No 91
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=1.1e-18 Score=146.25 Aligned_cols=103 Identities=23% Similarity=0.475 Sum_probs=90.0
Q ss_pred CCcEEeChhcHHHHHhCC--CeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCC----
Q 010469 93 KDVVVLKERNFSDVIENN--KFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQ---- 166 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~--~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~---- 166 (510)
..+..++.++|++.+..+ ++++|+|||+||++|+.+.|.|+++++++++ .++.++.||++++++++++|+|.
T Consensus 7 ~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~--~~v~~~~vd~~~~~~~~~~~~v~~~~~ 84 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNC--TGLNFGKVDVGRYTDVSTRYKVSTSPL 84 (137)
T ss_dssp SCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCS--SSCEEEECCTTTCHHHHHHTTCCCCSS
T ss_pred ceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CCeEEEEEeCccCHHHHHHccCcccCC
Confidence 458899999999988554 4999999999999999999999999999875 36999999999999999999999
Q ss_pred --cccEEEEEeCCe-eeeecCCCCHHHHHHHHHH
Q 010469 167 --GFPTIYFFVDGQ-HKAYNGGRTKDAIVTWIKK 197 (510)
Q Consensus 167 --~~P~~~~~~~g~-~~~y~g~~~~~~l~~~i~~ 197 (510)
++||+++|++|+ ..++.|..+.+.+.+|+.+
T Consensus 85 ~~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 85 TKQLPTLILFQGGKEAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp SSCSSEEEEESSSSEEEEESCBCSSSCBCCCCCC
T ss_pred cCCCCEEEEEECCEEEEEecCcCchHHHHHHHhc
Confidence 999999999994 4678898887777666643
No 92
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.73 E-value=5.2e-17 Score=132.07 Aligned_cols=104 Identities=33% Similarity=0.656 Sum_probs=90.7
Q ss_pred CCcEEe-ChhcHHHHHhC----CCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCc
Q 010469 93 KDVVVL-KERNFSDVIEN----NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQG 167 (510)
Q Consensus 93 ~~v~~l-~~~~~~~~~~~----~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~ 167 (510)
+.+..+ +.++|++.+.. +++++|.||++||++|+.+.|.|+++++.+. ++.++.||++++++++++|+|.+
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~v~~ 81 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP----GAIFLKVDVDELKDVAEAYNVEA 81 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTSHHHHHHTTCCS
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC----CcEEEEEEcccCHHHHHHcCCCc
Confidence 356777 57889988754 7899999999999999999999999998875 49999999999999999999999
Q ss_pred ccEEEEEeCCee-eeecCCCCHHHHHHHHHHHcCC
Q 010469 168 FPTIYFFVDGQH-KAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 168 ~P~~~~~~~g~~-~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
+|++++|++|+. .++.| .+.+.+.++|.+.+..
T Consensus 82 ~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 82 MPTFLFIKDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp BSEEEEEETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred CcEEEEEeCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 999999999954 56778 5889999999988754
No 93
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.72 E-value=2.4e-17 Score=136.96 Aligned_cols=127 Identities=21% Similarity=0.333 Sum_probs=108.5
Q ss_pred cCCCceeecCCCchhhhccCCccceEEEEEeccchhhHHHHHHHHHHhccCceEEEEEEcCCcccccchhhhcCCCCCCC
Q 010469 303 NKLPLVTIFTRENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 382 (510)
Q Consensus 303 ~~~p~~~~lt~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~A~~~~~~~~f~~vd~~~~~~~~~l~~~~gi~~~~~ 382 (510)
++.|++.++|.+++..++.++.+.++.++.....|+.+.+.++++|++|++++.|+++|.+. ...++..||+...+.
T Consensus 3 c~~plv~~~t~~~f~~~~~~~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~---~~~~a~~~gi~~~~i 79 (133)
T 2djk_A 3 LGSPLIGEIGPETYSDYMSAGIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAKA---FGAHAGNLNLKTDKF 79 (133)
T ss_dssp CSCCCSEECCHHHHHHHHHTTSCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTTT---TGGGTTTTTCCSSSS
T ss_pred cccCceeccChHHHHHHhcCCCCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchHH---hHHHHHHcCCCcccC
Confidence 67899999999999988776655544444444788999999999999999999999999876 457889999988778
Q ss_pred cEEEEeeCCCCCcccCC--CCCCHHHHHHHHHHhhcCcccccccCCCCCCCC
Q 010469 383 KVLAYTGNDDAKKHILD--GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETN 432 (510)
Q Consensus 383 P~~~i~~~~~~~~y~~~--~~~t~e~i~~Fi~~~~~Gkl~~~~kSe~~p~~~ 432 (510)
|++++++..++.+|.+. |.++.+.|.+|++++++|+++|++|||++|+.+
T Consensus 80 Ptl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl~p~~kSe~iP~~~ 131 (133)
T 2djk_A 80 PAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEKQ 131 (133)
T ss_dssp SEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCCCCSSCCCCCCTTS
T ss_pred CEEEEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCcCccccCCCCCCcC
Confidence 99999976455668776 899999999999999999999999999999874
No 94
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.72 E-value=5.5e-17 Score=131.87 Aligned_cols=103 Identities=25% Similarity=0.478 Sum_probs=87.2
Q ss_pred CcEEe--ChhcHHH-HHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccE
Q 010469 94 DVVVL--KERNFSD-VIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPT 170 (510)
Q Consensus 94 ~v~~l--~~~~~~~-~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~ 170 (510)
.+..+ +..+|++ +.+.+++++|+||++||++|+.+.|.|.++++.+ + ++.++.||++++++++++|+|.++|+
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~---~v~~~~vd~~~~~~~~~~~~i~~~Pt 79 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-K---DVTFIKVDVDKNGNAADAYGVSSIPA 79 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T---TSEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C---CeEEEEEECCCCHHHHHhcCCCCCCE
Confidence 46667 5788885 5567899999999999999999999999999988 3 69999999999999999999999999
Q ss_pred EEEEeC----Cee-eeecCCCCHHHHHHHHHHHcCC
Q 010469 171 IYFFVD----GQH-KAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 171 ~~~~~~----g~~-~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
+++|++ |+. .++.|..+ +.|...+.+...+
T Consensus 80 ~~~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~~~~ 114 (118)
T 2f51_A 80 LFFVKKEGNEIKTLDQFVGADV-SRIKADIEKFKHH 114 (118)
T ss_dssp EEEEEEETTEEEEEEEEESCCH-HHHHHHHHHHC--
T ss_pred EEEEeCCCCcceEEEeecCCCH-HHHHHHHHHhhhc
Confidence 999987 744 57888765 5699999887754
No 95
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.72 E-value=4.4e-17 Score=131.40 Aligned_cols=102 Identities=30% Similarity=0.595 Sum_probs=89.4
Q ss_pred CCcEEe-ChhcHHHHHhC----CCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCc
Q 010469 93 KDVVVL-KERNFSDVIEN----NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQG 167 (510)
Q Consensus 93 ~~v~~l-~~~~~~~~~~~----~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~ 167 (510)
+.+..+ +.++|++.+.. +++++|.||++||++|+.+.|.|.++++.+. ++.++.||++++++++++|+|.+
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~~~~~~~~~~v~~ 79 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP----NVTFLKVDVDELKAVAEEWNVEA 79 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS----SEEEEEEETTTCHHHHHHHHCSS
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC----CcEEEEEEccccHHHHHhCCCCc
Confidence 346677 67899988753 8899999999999999999999999998874 49999999999999999999999
Q ss_pred ccEEEEEeCCee-eeecCCCCHHHHHHHHHHHc
Q 010469 168 FPTIYFFVDGQH-KAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 168 ~P~~~~~~~g~~-~~y~g~~~~~~l~~~i~~~~ 199 (510)
+|++++|++|+. .++.| .+.+.+.++|.+.+
T Consensus 80 ~Pt~~~~~~G~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 80 MPTFIFLKDGKLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp TTEEEEEETTEEEEEEEC-CCTTHHHHHHHHHH
T ss_pred ccEEEEEeCCEEEEEEec-CCHHHHHHHHHHhh
Confidence 999999999954 56778 68899999998765
No 96
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.71 E-value=1.1e-15 Score=149.19 Aligned_cols=261 Identities=16% Similarity=0.199 Sum_probs=198.4
Q ss_pred cccccchhHHHHhccCCCeEEEEEecCCCCc--chHH-------HHHhc-cccC-ceeEEEc---CChhHHHhhCCCCCC
Q 010469 203 IYNITTLDEAERVLTSETKVVLGYLNSLVGS--ESEV-------LADAS-RLED-DVNFYQT---TNPDVAKIFHLDSKV 268 (510)
Q Consensus 203 ~~~i~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~-------~~~~~-~~~~-~~~f~~~---~~~~l~~~~~~~~~~ 268 (510)
+..++. +++++.+.+++.++|.|+.+++.- .... +.+++ .+.. .+.|+.+ .+.++++++++..
T Consensus 13 v~~l~~-~~f~~~i~~~~~~lV~F~a~wC~c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~-- 89 (350)
T 1sji_A 13 VVSLTE-KNFKQVLKKYDVLCLYYHESVSSDKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFDE-- 89 (350)
T ss_dssp CEEECH-HHHHHHHTTCSEEEEEEECCSCSSSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCCS--
T ss_pred cEECCH-HHHHHHHhhCCeEEEEEECCCCcchhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCCc--
Confidence 555544 788888888888999999999862 2222 66666 4444 5888865 4568999999997
Q ss_pred CCCeEEEeccCCCceeeccCCCCCHHHHHHHHHhcCCCceeecC-CCchhhhcc-CCccceEEEEEeccchhhHHHHHHH
Q 010469 269 NRPALVMVKKETEKISYFADGKFDKSTIADFVFSNKLPLVTIFT-RENAPSVFE-SPIKNQLLLFAVSNDSEKLLPVFEE 346 (510)
Q Consensus 269 ~~p~l~~~~~~~~~~~~y~~g~~~~~~i~~fi~~~~~p~~~~lt-~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~ 346 (510)
.|++++|+.+. ...| .|..+.+.|.+|+.....|.+.+++ .+++..+.. .. ...++.|.... +......|.+
T Consensus 90 -~Pt~~~~~~g~--~~~~-~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~-~~~vv~ff~~~-~~~~~~~~~~ 163 (350)
T 1sji_A 90 -EGSLYVLKGDR--TIEF-DGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIED-QIKLIGFFKSE-ESEYYKAFEE 163 (350)
T ss_dssp -TTEEEEEETTE--EEEE-CSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCS-SCEEEEECSCT-TSHHHHHHHH
T ss_pred -cceEEEEECCc--EEEe-cCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCC-CcEEEEEECCC-CcHHHHHHHH
Confidence 89999997654 6688 9999999999999999999999995 466777665 33 34455554442 3445678999
Q ss_pred HHHhccCceEEEEEEcCCcccccchhhhcCCCCCCCcEEEEeeCCCCCcccCCCC-CCHHHHHHHHHHhhcCcccccccC
Q 010469 347 AAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGE-LTLDKIKTFGEDFLEGKLKPFFKS 425 (510)
Q Consensus 347 ~A~~~~~~~~f~~vd~~~~~~~~~l~~~~gi~~~~~P~~~i~~~~~~~~y~~~~~-~t~e~i~~Fi~~~~~Gkl~~~~kS 425 (510)
+|..+++++.|+.+. ...+++.+|++ .|.++++.........+.|. .+.++|.+|+.....
T Consensus 164 ~A~~~~~~~~f~~~~------~~~~~~~~~v~---~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~--------- 225 (350)
T 1sji_A 164 AAEHFQPYIKFFATF------DKGVAKKLSLK---MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQR--------- 225 (350)
T ss_dssp HHHHTTTTSEEEEEC------CHHHHHHHTCC---TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCC---------
T ss_pred HHHhhccCcEEEEEC------CHHHHHHcCCC---CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCc---------
Confidence 999999999999885 23588899996 58888886644455667775 899999999987432
Q ss_pred CCCCCCCCCceEEEeCcchhhHhhccC-CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCc
Q 010469 426 DPIPETNDGDVKIVVGNNFDEIVLDES-KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE 498 (510)
Q Consensus 426 e~~p~~~~~~~~~l~~~~f~~~v~~~~-~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~ 498 (510)
+.+.+++.+++.+....+- +..++.|+.+||++|..+.+.+.++|+.+++..++.|+.+|++...
T Consensus 226 --------p~v~elt~~~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~ 291 (350)
T 1sji_A 226 --------PTLRRLRPEDMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFP 291 (350)
T ss_dssp --------CSEEECCTTTHHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCH
T ss_pred --------cchhhcChhhHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhH
Confidence 3567899999988654332 4455669999999999999999999999974357899999987553
No 97
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.71 E-value=9.1e-15 Score=149.22 Aligned_cols=307 Identities=16% Similarity=0.258 Sum_probs=225.3
Q ss_pred CCcEEe-ChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 93 KDVVVL-KERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 93 ~~v~~l-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
..+..+ +.++++..+..++.++|.|+.++|..| .+.|.++|..+.+ .+.|+.++ +.++++++++...| +
T Consensus 110 ~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~---~~~f~~~a~~~~~---~~~F~~~~---~~~~~~~~~v~~~~-i 179 (481)
T 3f8u_A 110 PASVPLRTEEEFKKFISDKDASIVGFFDDSFSEA---HSEFLKAASNLRD---NYRFAHTN---VESLVNEYDDNGEG-I 179 (481)
T ss_dssp CSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHH---HHHHHHHHHHHTT---TSCEEEEC---CHHHHHHHCSSSEE-E
T ss_pred cCceecCCHHHHHHHHhcCCcEEEEEECCCccch---HHHHHHHHHHhcc---CceEEEEC---CHHHHHHhCCCCCc-E
Confidence 346666 667888888888999999999987765 5789999999977 68888764 57899999998766 7
Q ss_pred EEEe--------CCeeeeec-CCCCHHHHHHHHHHHcCCCcccccchhHHHHhccCCCeEEEEEecCCCCcc-------h
Q 010469 172 YFFV--------DGQHKAYN-GGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGSE-------S 235 (510)
Q Consensus 172 ~~~~--------~g~~~~y~-g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~ 235 (510)
++|+ ++....|. |..+.+.|.+||....-|.+.+++. +....+.. .+ .+++|+....... .
T Consensus 180 ~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~-~n~~~~~~-~~-~~v~~~~~~~~~~~~~~~~~~ 256 (481)
T 3f8u_A 180 ILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTE-DNKDLIQG-KD-LLIAYYDVDYEKNAKGSNYWR 256 (481)
T ss_dssp EEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECT-TTHHHHTT-SS-EEEEEECCCTTTCHHHHHHHH
T ss_pred EEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccCh-hHHHHhcC-CC-ceEEEEecccccchhhHHHHH
Confidence 7887 34667888 8899999999999999998888865 55666653 33 3444443322111 2
Q ss_pred HHHHHhc-cccCc---eeEEEcCCh---hHHHhhCCCC-CCCCCeEEEeccCCCceeeccCCCCCHH--HHHHHHHhcC-
Q 010469 236 EVLADAS-RLEDD---VNFYQTTNP---DVAKIFHLDS-KVNRPALVMVKKETEKISYFADGKFDKS--TIADFVFSNK- 304 (510)
Q Consensus 236 ~~~~~~~-~~~~~---~~f~~~~~~---~l~~~~~~~~-~~~~p~l~~~~~~~~~~~~y~~g~~~~~--~i~~fi~~~~- 304 (510)
..+..+| +++++ +.|..+... ...+.||++. ....|.++++.. ++....+ .+.++.+ .|.+|+....
T Consensus 257 ~~~~~vA~~~~~k~~~i~F~~~D~~~~~~~l~~~gl~~~~~~~P~~~i~~~-~~~ky~~-~~~~t~e~~~l~~f~~~~~~ 334 (481)
T 3f8u_A 257 NRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTA-KGEKFVM-QEEFSRDGKALERFLQDYFD 334 (481)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCTTCSCEEEEECS-SSCEEEC-CSCCCTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEEEcHHHHHHHHHHcCCCcccCCCcEEEEEcC-CCcccCC-CcccCccHHHHHHHHHHHhc
Confidence 3355555 56666 899887654 3556889873 235799998873 3345566 6788888 9999998522
Q ss_pred ----------------CCceeecCCCchhhhccCCccceEEEEEec--cchhhHHHHHHHHHHhccC--ceEEEEEEcCC
Q 010469 305 ----------------LPLVTIFTRENAPSVFESPIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKG--KLIFVYVQMDN 364 (510)
Q Consensus 305 ----------------~p~~~~lt~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~A~~~~~--~~~f~~vd~~~ 364 (510)
...+..++.+++..+.....+.+++.|... ..|+...+.+.+++.++.+ ++.|+.+|+..
T Consensus 335 g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~ 414 (481)
T 3f8u_A 335 GNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA 414 (481)
T ss_dssp TCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTS
T ss_pred CCcccccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCc
Confidence 124566777888877666445566666654 7899999999999999987 59999999875
Q ss_pred cccccchhhhcCCCCCCCcEEEEeeCCCC-CcccCCCCCCHHHHHHHHHHhhcCccc
Q 010469 365 EDVGKPVSEYFGITGEAPKVLAYTGNDDA-KKHILDGELTLDKIKTFGEDFLEGKLK 420 (510)
Q Consensus 365 ~~~~~~l~~~~gi~~~~~P~~~i~~~~~~-~~y~~~~~~t~e~i~~Fi~~~~~Gkl~ 420 (510)
. .++..|++.. .|+++++..++. ....+.|..+.+.+.+||+........
T Consensus 415 ~----~~~~~~~v~~--~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~~~ 465 (481)
T 3f8u_A 415 N----DVPSPYEVRG--FPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNPPV 465 (481)
T ss_dssp S----CCCTTCCCCS--SSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCSSCCC
T ss_pred h----hhHhhCCCcc--cCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcCCccc
Confidence 3 5667788865 589988866543 267788999999999999998765443
No 98
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.71 E-value=1.2e-16 Score=145.46 Aligned_cols=108 Identities=20% Similarity=0.381 Sum_probs=95.4
Q ss_pred cCCCCcEEeChhcHHHHHhCCCeEEEEEE--CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-----cHHHHHh
Q 010469 90 IDDKDVVVLKERNFSDVIENNKFVMVEFY--APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-----ENELAHE 162 (510)
Q Consensus 90 ~~~~~v~~l~~~~~~~~~~~~~~~~v~f~--a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-----~~~~~~~ 162 (510)
.....++.|++.+|++++.+++++||.|| ||||+ +.|.|+++++.+++...++.|+.|||++ ++++|++
T Consensus 13 ~~~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~ 88 (248)
T 2c0g_A 13 VTCTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDR 88 (248)
T ss_dssp --CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHH
T ss_pred CCCCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHH
Confidence 34556899999999998888899999999 99999 9999999999996522379999999999 8999999
Q ss_pred CCCC--cccEEEEEeCCe---eeee--cCCCCHHHHHHHHHHHcCCC
Q 010469 163 YDVQ--GFPTIYFFVDGQ---HKAY--NGGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 163 ~~v~--~~P~~~~~~~g~---~~~y--~g~~~~~~l~~~i~~~~~~~ 202 (510)
|+|+ ++||+++|+ |. ...| .|.++.+.|.+||.+.++..
T Consensus 89 ~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~~ 134 (248)
T 2c0g_A 89 YKVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPLY 134 (248)
T ss_dssp TTCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSCC
T ss_pred hCCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhccc
Confidence 9999 999999999 85 5788 99999999999999987643
No 99
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.70 E-value=5.7e-17 Score=134.71 Aligned_cols=104 Identities=18% Similarity=0.387 Sum_probs=89.6
Q ss_pred CCCCcEEeCh-hcHHHHHhC--CCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCc
Q 010469 91 DDKDVVVLKE-RNFSDVIEN--NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQG 167 (510)
Q Consensus 91 ~~~~v~~l~~-~~~~~~~~~--~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~ 167 (510)
....+..++. ++|+.++.. +++++|+|||+||++|+.+.|.|+++++.+ ++.++.||++++++++++|+|.+
T Consensus 18 ~~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-----~v~~~~vd~~~~~~l~~~~~v~~ 92 (133)
T 3cxg_A 18 GQSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-----YVTLVDIDVDIHPKLNDQHNIKA 92 (133)
T ss_dssp TTEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-----ECEEEEEETTTCHHHHHHTTCCS
T ss_pred CCccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-----CEEEEEEeccchHHHHHhcCCCC
Confidence 3456788875 888888864 579999999999999999999999987655 48999999999999999999999
Q ss_pred ccEEEEEe--CCe--e-eeecCCCCHHHHHHHHHHHcC
Q 010469 168 FPTIYFFV--DGQ--H-KAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 168 ~P~~~~~~--~g~--~-~~y~g~~~~~~l~~~i~~~~~ 200 (510)
+|++++|+ +|. . .++.|. +.+.|.++|.+.+.
T Consensus 93 ~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 93 LPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp SSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred CCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 99999996 885 3 467887 89999999998764
No 100
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.69 E-value=2e-16 Score=131.68 Aligned_cols=100 Identities=12% Similarity=0.238 Sum_probs=85.9
Q ss_pred CCcEEeChhcHHHHHhC---CCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCccc
Q 010469 93 KDVVVLKERNFSDVIEN---NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFP 169 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~~~---~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 169 (510)
+.+..++.++|.+.+.+ +++++|+|||+||++|+.+.|.|+++++++. ++.|+.||+++.. ++|+|.++|
T Consensus 10 g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~----~v~~~~vd~~~~~---~~~~i~~~P 82 (135)
T 2dbc_A 10 GELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP----ETKFVKAIVNSCI---EHYHDNCLP 82 (135)
T ss_dssp CSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS----SEEEEEECCSSSC---SSCCSSCCS
T ss_pred CceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC----CcEEEEEEhhcCc---ccCCCCCCC
Confidence 46888999999997753 3699999999999999999999999998874 4999999998875 789999999
Q ss_pred EEEEEeCC-eeeeecCCC-------CHHHHHHHHHHHc
Q 010469 170 TIYFFVDG-QHKAYNGGR-------TKDAIVTWIKKKI 199 (510)
Q Consensus 170 ~~~~~~~g-~~~~y~g~~-------~~~~l~~~i~~~~ 199 (510)
|+++|++| ...++.|.. +.+.|.++|.+.-
T Consensus 83 t~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 83 TIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp EEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred EEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 99999999 445777765 7889999998763
No 101
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=1.5e-16 Score=131.80 Aligned_cols=104 Identities=23% Similarity=0.507 Sum_probs=88.9
Q ss_pred EEeChhcHHHHH----hCCCeEEEEEECCCChHHhhhhHHH---HHHHHHHhhcCCCeEEEEEeCc--ccHHHHHhCCCC
Q 010469 96 VVLKERNFSDVI----ENNKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVDAT--EENELAHEYDVQ 166 (510)
Q Consensus 96 ~~l~~~~~~~~~----~~~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~ 166 (510)
..++..+|++.+ .++++++|+||++||++|+.+.|.+ .++++.++. .+.++.||++ .+..++++|+|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~~~v~ 85 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR---HFVNLKMDMEKGEGVELRKKYGVH 85 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH---HSEEEEECSSSTTHHHHHHHTTCC
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc---CeEEEEEecCCcchHHHHHHcCCC
Confidence 335677887766 3678999999999999999999999 777777665 6899999998 578999999999
Q ss_pred cccEEEEE-eCC-eeeeecCCCCHHHHHHHHHHHcCCC
Q 010469 167 GFPTIYFF-VDG-QHKAYNGGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 167 ~~P~~~~~-~~g-~~~~y~g~~~~~~l~~~i~~~~~~~ 202 (510)
++|++++| ++| ...++.|..+.+.+.++|++.+.+.
T Consensus 86 ~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 86 AYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp SSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 99999999 588 4458899999999999999988764
No 102
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.68 E-value=5.1e-15 Score=145.06 Aligned_cols=262 Identities=15% Similarity=0.170 Sum_probs=200.5
Q ss_pred cccccchhHHHHhccCCCeEEEEEecCCCCcc---h------HHHHHhc-cccC-ceeEEEc---CChhHHHhhCCCCCC
Q 010469 203 IYNITTLDEAERVLTSETKVVLGYLNSLVGSE---S------EVLADAS-RLED-DVNFYQT---TNPDVAKIFHLDSKV 268 (510)
Q Consensus 203 ~~~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~------~~~~~~~-~~~~-~~~f~~~---~~~~l~~~~~~~~~~ 268 (510)
+..++. +++++.+.++..++|.|+.+++... . ..+..++ .+.. .+.|+.+ .+++++++|++..
T Consensus 15 v~~lt~-~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~-- 91 (367)
T 3us3_A 15 VINVNA-KNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTE-- 91 (367)
T ss_dssp CEECCT-TTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCS--
T ss_pred cEECCH-HHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCc--
Confidence 555544 7888888888889999999999662 1 1455555 3433 5888865 4678999999997
Q ss_pred CCCeEEEeccCCCceeeccCCCCCHHHHHHHHHhcCCCceeecCC-CchhhhccCCccceEEEEEeccchhhHHHHHHHH
Q 010469 269 NRPALVMVKKETEKISYFADGKFDKSTIADFVFSNKLPLVTIFTR-ENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEA 347 (510)
Q Consensus 269 ~~p~l~~~~~~~~~~~~y~~g~~~~~~i~~fi~~~~~p~~~~lt~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 347 (510)
.|++++|+.+ ....| .|..+.+.|.+||..+..|.+..++. +++..+........++.|... .+......|.++
T Consensus 92 -~PTl~~f~~G--~~~~y-~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~-~~~~~~~~f~~~ 166 (367)
T 3us3_A 92 -EDSIYVFKED--EVIEY-DGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKN-KDSEHYKAFKEA 166 (367)
T ss_dssp -TTEEEEEETT--EEEEC-CSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSC-TTCHHHHHHHHH
T ss_pred -CceEEEEECC--cEEEe-CCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECC-CCchHHHHHHHH
Confidence 8999999964 45689 99999999999999999999999964 677777652334455555443 334567789999
Q ss_pred HHhccCceEEEEEEcCCcccccchhhhcCCCCCCCcEEEEeeCCCCCcccCCC-CCCHHHHHHHHHHhhcCcccccccCC
Q 010469 348 AKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDG-ELTLDKIKTFGEDFLEGKLKPFFKSD 426 (510)
Q Consensus 348 A~~~~~~~~f~~vd~~~~~~~~~l~~~~gi~~~~~P~~~i~~~~~~~~y~~~~-~~t~e~i~~Fi~~~~~Gkl~~~~kSe 426 (510)
|..+++.+.|+.+. ...+++.+|+.. |.++++.........|.| ..+.+.|.+||..-.
T Consensus 167 A~~~~~~~~F~~~~------~~~~~~~~~v~~---p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~----------- 226 (367)
T 3us3_A 167 AEEFHPYIPFFATF------DSKVAKKLTLKL---NEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHR----------- 226 (367)
T ss_dssp HHHHTTTSCEEEEC------CHHHHHHHTCCT---TCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTC-----------
T ss_pred HHhhcCCcEEEEEC------CHHHHHHcCCCC---CeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcC-----------
Confidence 99999999999876 235788999963 788888664445566677 599999999997733
Q ss_pred CCCCCCCCceEEEeCcchhhHhhcc-CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCc
Q 010469 427 PIPETNDGDVKIVVGNNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE 498 (510)
Q Consensus 427 ~~p~~~~~~~~~l~~~~f~~~v~~~-~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~ 498 (510)
.+.+.+++.+++.+..... .++.++.|+.++|+.|..+.+.+.++|+.+++..++.|+.+|+....
T Consensus 227 ------~p~v~elt~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~ 293 (367)
T 3us3_A 227 ------RSTLRKLKPESMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFP 293 (367)
T ss_dssp ------SCSEEECCGGGHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCT
T ss_pred ------ccceeecChhhHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccch
Confidence 2357789999988766543 34677789999999999999999999999987446999999988655
No 103
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.67 E-value=3.1e-16 Score=143.26 Aligned_cols=105 Identities=20% Similarity=0.285 Sum_probs=92.0
Q ss_pred cEEeChhcHHHHHhCCCeE-EEEEECCCChHHhhhhHHHHHHHHHHhhc-CCCeEEEEEeCcccHHHHHhCCCCcccEEE
Q 010469 95 VVVLKERNFSDVIENNKFV-MVEFYAPWCGHCQALAPEYAAAATELKSA-NESVVLAKVDATEENELAHEYDVQGFPTIY 172 (510)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~-~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~ 172 (510)
+..+++++++.+...++++ +|+|||+||++|+++.|.|.++++.+.+. ..++.++.||++++++++++|+|.++||++
T Consensus 118 ~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 197 (226)
T 1a8l_A 118 ETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIV 197 (226)
T ss_dssp CCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEE
T ss_pred CCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEE
Confidence 4567888888887666666 99999999999999999999999999721 126999999999999999999999999999
Q ss_pred EEeCC-eeeeecCCCCHHHHHHHHHHHc
Q 010469 173 FFVDG-QHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 173 ~~~~g-~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
+|++| ...++.|..+.+.+.+||.+.+
T Consensus 198 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 198 IQVNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 99999 5568999999999999998765
No 104
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.67 E-value=6.4e-16 Score=140.34 Aligned_cols=102 Identities=29% Similarity=0.545 Sum_probs=92.9
Q ss_pred CCcEEeChhcHHHHHhCCCeEEEEEEC--CCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEe-----CcccHHHHHhCCC
Q 010469 93 KDVVVLKERNFSDVIENNKFVMVEFYA--PWCGHCQALAPEYAAAATELKSANESVVLAKVD-----ATEENELAHEYDV 165 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~~v~f~a--~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd-----~~~~~~~~~~~~v 165 (510)
..|+.|++.+|++++..++++||.||| |||+ +.|.|+++++.+++ ..++.|+.|| |+.++++|++|+|
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~-~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSAS-SDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTT-CTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcC-CCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 468899999999999888999999999 9999 99999999999975 2369999999 5568999999999
Q ss_pred C--cccEEEEEeCCe---eeeecCCCCHHHHHHHHHHHc
Q 010469 166 Q--GFPTIYFFVDGQ---HKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 166 ~--~~P~~~~~~~g~---~~~y~g~~~~~~l~~~i~~~~ 199 (510)
. ++||+++|++|. ...|.|.++.+.|.+||.+..
T Consensus 80 ~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 80 DKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 9 999999999986 679999999999999999884
No 105
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.67 E-value=2.3e-17 Score=150.16 Aligned_cols=130 Identities=16% Similarity=0.255 Sum_probs=101.0
Q ss_pred CCCCcccccccCCCCCCCCCCCCCCCCccCCCCcEEe-ChhcHHHHHh---CCCeEEEEEECCCChHHhhhhHHHHHHHH
Q 010469 62 DPDDDDFSDDFDDENYHDFDDSEYKEPEIDDKDVVVL-KERNFSDVIE---NNKFVMVEFYAPWCGHCQALAPEYAAAAT 137 (510)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l-~~~~~~~~~~---~~~~~~v~f~a~wC~~C~~~~p~~~~~~~ 137 (510)
|++++.|-..++.++......... +....+.|..+ +..+|...+. .++++||+|||+||++|+.+.|.|.++++
T Consensus 83 d~eDe~fL~~~r~~Rl~el~~~~~--~~~~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~ 160 (245)
T 1a0r_P 83 DKEDENCLRKYRRQCMQDMHQKLS--FGPRYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAA 160 (245)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHC--CCCCCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHhh--ccCCCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHH
Confidence 445566777776666544432221 22344578889 7899999884 37899999999999999999999999999
Q ss_pred HHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEEeCCee-eeecCC-------CCHHHHHHHHHHH
Q 010469 138 ELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQH-KAYNGG-------RTKDAIVTWIKKK 198 (510)
Q Consensus 138 ~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~~g~~-~~y~g~-------~~~~~l~~~i~~~ 198 (510)
++.+ +.|+.||++. +.++.+|+|.++||+++|++|.. .++.|. .+.+.|..||.+.
T Consensus 161 ~~~~----v~f~kVd~d~-~~l~~~~~I~~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 161 EYPM----VKFCKIKASN-TGAGDRFSSDVLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp HCTT----SEEEEEEHHH-HCCTTSSCTTTCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred HCCC----CEEEEEeCCc-HHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 8854 9999999977 77899999999999999999944 566664 3456788888765
No 106
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.66 E-value=4.9e-16 Score=129.23 Aligned_cols=91 Identities=22% Similarity=0.409 Sum_probs=80.5
Q ss_pred HHhCCCeEEEEEECCCChHHhhhhHHHH--HHHHHHhhcCCCeEEEEEeC---cccHHHHHhCCC---CcccEEEEE-eC
Q 010469 106 VIENNKFVMVEFYAPWCGHCQALAPEYA--AAATELKSANESVVLAKVDA---TEENELAHEYDV---QGFPTIYFF-VD 176 (510)
Q Consensus 106 ~~~~~~~~~v~f~a~wC~~C~~~~p~~~--~~~~~~~~~~~~v~~~~vd~---~~~~~~~~~~~v---~~~P~~~~~-~~ 176 (510)
....+++++|+||++||++|+.+.|.|. ++++.+++ ++.++.||+ +++++++++|+| .++|++++| .+
T Consensus 25 ~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~---~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~ 101 (133)
T 3fk8_A 25 GKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK---HFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSD 101 (133)
T ss_dssp HHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH---HCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTT
T ss_pred HHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC---CEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCC
Confidence 3356899999999999999999999999 99999876 699999999 899999999999 999999999 68
Q ss_pred C-eeeeecC-------CCCHHHHHHHHHHHc
Q 010469 177 G-QHKAYNG-------GRTKDAIVTWIKKKI 199 (510)
Q Consensus 177 g-~~~~y~g-------~~~~~~l~~~i~~~~ 199 (510)
| ...++.| ..+.+.+.+|+.+..
T Consensus 102 G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 102 GKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp SCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred CCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 8 4457777 678899999998753
No 107
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.47 E-value=6.6e-18 Score=134.45 Aligned_cols=101 Identities=33% Similarity=0.675 Sum_probs=90.1
Q ss_pred cEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEE
Q 010469 95 VVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYF 173 (510)
Q Consensus 95 v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~ 173 (510)
+..+++++|.+.+ .++++++|.||++||++|+.+.|.|.++++.+.+ ++.++.+|++++++++++++|.++|++++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 79 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG---KVKVVKVNVDENPNTAAQYGIRSIPTLLL 79 (106)
Confidence 5678888988644 6788999999999999999999999999998876 69999999999999999999999999999
Q ss_pred EeCCe-eeeecCCCCHHHHHHHHHHH
Q 010469 174 FVDGQ-HKAYNGGRTKDAIVTWIKKK 198 (510)
Q Consensus 174 ~~~g~-~~~y~g~~~~~~l~~~i~~~ 198 (510)
|++|+ ..++.|..+.+.+.+|+.+.
T Consensus 80 ~~~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 80 FKNGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 98884 45889999999999998764
No 108
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.65 E-value=3.5e-16 Score=130.20 Aligned_cols=98 Identities=22% Similarity=0.457 Sum_probs=83.5
Q ss_pred ChhcHHHHHh--CCCeEEEEEECCCChHHhhhhHHH---HHHHHHHhhcCCCeEEEEEeC----cccHHHHHhCCCCccc
Q 010469 99 KERNFSDVIE--NNKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVDA----TEENELAHEYDVQGFP 169 (510)
Q Consensus 99 ~~~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~----~~~~~~~~~~~v~~~P 169 (510)
+.++++..+. .+++++|+||++||++|+.+.|.+ .++++.+++ +.++.||+ +...+++++|+|.++|
T Consensus 18 ~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~----~~~~~vd~~~~~~~~~~l~~~~~v~~~P 93 (134)
T 2fwh_A 18 TVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD----TVLLQANVTANDAQDVALLKHLNVLGLP 93 (134)
T ss_dssp SHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT----SEEEEEECTTCCHHHHHHHHHTTCCSSS
T ss_pred CHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC----cEEEEEeCCCCcchHHHHHHHcCCCCCC
Confidence 4566777664 378999999999999999999999 888888754 99999999 5678899999999999
Q ss_pred EEEEE-eCCee---eeecCCCCHHHHHHHHHHHcC
Q 010469 170 TIYFF-VDGQH---KAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 170 ~~~~~-~~g~~---~~y~g~~~~~~l~~~i~~~~~ 200 (510)
++++| ++|+. .++.|..+.+.|.+++.+.-+
T Consensus 94 t~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 94 TILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp EEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC--
T ss_pred EEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcCc
Confidence 99999 68855 489999999999999987654
No 109
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.64 E-value=4.2e-16 Score=118.53 Aligned_cols=83 Identities=31% Similarity=0.525 Sum_probs=76.3
Q ss_pred CeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEEeCCeeeeecCCCCHHH
Q 010469 111 KFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDA 190 (510)
Q Consensus 111 ~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~~g~~~~y~g~~~~~~ 190 (510)
.+++|.||++||++|+++.|.|+++++++++ ++.++.+|++++++++++++|.++|++++ +|+. ++.|..+.+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-~~~G~~~~~~ 76 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD---AVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV-EFIGAPTKEA 76 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS---SEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE-ECCSSSSSHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC---ceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE-eeecCCCHHH
Confidence 4789999999999999999999999998875 69999999999999999999999999988 8876 8999999999
Q ss_pred HHHHHHHHc
Q 010469 191 IVTWIKKKI 199 (510)
Q Consensus 191 l~~~i~~~~ 199 (510)
+.+++.+.+
T Consensus 77 l~~~l~~~l 85 (85)
T 1fo5_A 77 LVEAIKKRL 85 (85)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998753
No 110
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.63 E-value=8e-15 Score=134.82 Aligned_cols=193 Identities=15% Similarity=0.162 Sum_probs=140.6
Q ss_pred hcHHHHHhC-CCeEEEEEECCC--ChHHhhhhHHHHHHHHHHhhcCCC--eEEEEEeCcccHHHHHhCCCCcccEEEEEe
Q 010469 101 RNFSDVIEN-NKFVMVEFYAPW--CGHCQALAPEYAAAATELKSANES--VVLAKVDATEENELAHEYDVQGFPTIYFFV 175 (510)
Q Consensus 101 ~~~~~~~~~-~~~~~v~f~a~w--C~~C~~~~p~~~~~~~~~~~~~~~--v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~ 175 (510)
+.+.+++.. .++++|.||++| |++|+.+.|.+.++++.......+ +.|+.+|+++++++|++|+|+++||+.+|
T Consensus 15 ~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~- 93 (243)
T 2hls_A 15 RELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL- 93 (243)
T ss_dssp HHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET-
T ss_pred HHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE-
Confidence 456666643 479999999999 999999999999999874210013 99999999999999999999999999999
Q ss_pred CCeeeeecCCCCHHHHHHHHHHHcC--CCcccccchhHHHHhccC-CCeEEEEEecCCCCcchHH---HHHhcccc----
Q 010469 176 DGQHKAYNGGRTKDAIVTWIKKKIG--PGIYNITTLDEAERVLTS-ETKVVLGYLNSLVGSESEV---LADASRLE---- 245 (510)
Q Consensus 176 ~g~~~~y~g~~~~~~l~~~i~~~~~--~~~~~i~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~---~~~~~~~~---- 245 (510)
+| ..+|.|....+.+..|+...+. .....+ +.+..+.+.+. .+..++.|+..++...... +..++...
T Consensus 94 ~g-~~~~~G~~~~~~l~~fv~~~l~~~~~~~~l-~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~ 171 (243)
T 2hls_A 94 GG-EVRWTGIPAGEEIRALVEVIMRLSEDESGL-EDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQG 171 (243)
T ss_dssp TT-TEEEESCCCTTHHHHHHHHHHHHHTTCCCC-CHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTT
T ss_pred CC-ceeEcCCCcHHHHHHHHHHHHhccCCCCCC-CHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHccccc
Confidence 77 7789998888889888887652 111222 32334433322 4456777888888775443 44444222
Q ss_pred -CceeEEEc---CChhHHHhhCCCCCCCCCeEEEeccCCCceeeccCCCCCHHHHHHHHHhcCC
Q 010469 246 -DDVNFYQT---TNPDVAKIFHLDSKVNRPALVMVKKETEKISYFADGKFDKSTIADFVFSNKL 305 (510)
Q Consensus 246 -~~~~f~~~---~~~~l~~~~~~~~~~~~p~l~~~~~~~~~~~~y~~g~~~~~~i~~fi~~~~~ 305 (510)
..+.+..+ .+++++.+|++.. .|++++ ++ .. .| .|..+.++|.+||....-
T Consensus 172 ~~~v~~~~vd~~~~~~~~~~~~V~~---vPt~~i---~G-~~-~~-~G~~~~~~l~~~l~~~~~ 226 (243)
T 2hls_A 172 NPVILSEAVEAYENPDIADKYGVMS---VPSIAI---NG-YL-VF-VGVPYEEDFLDYVKSAAE 226 (243)
T ss_dssp CCCEEEEEEETTTCHHHHHHTTCCS---SSEEEE---TT-EE-EE-ESCCCHHHHHHHHHHHHT
T ss_pred CCcEEEEEEECccCHHHHHHcCCee---eCeEEE---CC-EE-EE-eCCCCHHHHHHHHHHHhh
Confidence 46777664 4568899999986 899987 22 33 47 888899999999987653
No 111
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.63 E-value=3.6e-16 Score=140.63 Aligned_cols=130 Identities=16% Similarity=0.269 Sum_probs=101.3
Q ss_pred CCCCcccccccCCCCCCCCCCCCCCCCccCCCCcEEe-ChhcHHHHHhC---CCeEEEEEECCCChHHhhhhHHHHHHHH
Q 010469 62 DPDDDDFSDDFDDENYHDFDDSEYKEPEIDDKDVVVL-KERNFSDVIEN---NKFVMVEFYAPWCGHCQALAPEYAAAAT 137 (510)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l-~~~~~~~~~~~---~~~~~v~f~a~wC~~C~~~~p~~~~~~~ 137 (510)
|+.++.|-..+..++......... +...-+.|..+ +.++|.+.+.+ ++++||+||++||++|+.+.|.|.++++
T Consensus 70 d~~d~~fl~~~r~~Rl~el~~~~~--~~~~~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~ 147 (217)
T 2trc_P 70 DKEDEGCLRKYRRQCMQDMHQKLS--FGPRYGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAA 147 (217)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHC--CCCCCCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHT
T ss_pred ccccHHHHHHHHHHHHHHHHHHHH--hccCCCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHH
Confidence 334556666666655544332211 22234568888 89999998743 3899999999999999999999999998
Q ss_pred HHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEEeCCe-eeeecCCCCH-------HHHHHHHHHH
Q 010469 138 ELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQ-HKAYNGGRTK-------DAIVTWIKKK 198 (510)
Q Consensus 138 ~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~~g~-~~~y~g~~~~-------~~l~~~i~~~ 198 (510)
++. .+.|+.||++ ++.++.+|+|.++||+++|++|. ..++.|..+. +.|..||.+.
T Consensus 148 ~~~----~v~f~~vd~~-~~~l~~~~~i~~~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 148 EYP----MVKFCKIRAS-NTGAGDRFSSDVLPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp TCT----TSEEEEEEHH-HHTCSTTSCGGGCSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred HCC----CeEEEEEECC-cHHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 874 4999999998 78899999999999999999994 4578887764 8888888754
No 112
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.62 E-value=5.5e-16 Score=117.89 Aligned_cols=82 Identities=21% Similarity=0.383 Sum_probs=75.6
Q ss_pred eEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEEeCCeeeeecCCCCHHHH
Q 010469 112 FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAI 191 (510)
Q Consensus 112 ~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~~g~~~~y~g~~~~~~l 191 (510)
..+|.||++||++|+++.|.|+++++++.+ ++.++.+|++++++++++++|.++|++++ +|+. ++.|..+.+.+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-~~~G~~~~~~l 76 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD---KIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV-RFVGAPSREEL 76 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS---SCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE-EEECSSCCHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC---CeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE-EEccCCCHHHH
Confidence 468999999999999999999999999875 69999999999999999999999999998 8876 88999999999
Q ss_pred HHHHHHHc
Q 010469 192 VTWIKKKI 199 (510)
Q Consensus 192 ~~~i~~~~ 199 (510)
.+++.+.+
T Consensus 77 ~~~l~~~l 84 (85)
T 1nho_A 77 FEAINDEM 84 (85)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998765
No 113
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.62 E-value=1.1e-15 Score=125.18 Aligned_cols=100 Identities=16% Similarity=0.313 Sum_probs=85.2
Q ss_pred CcEEeChhcHHHHHhC--CCeEEEEEECC-------CChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeC-------cccH
Q 010469 94 DVVVLKERNFSDVIEN--NKFVMVEFYAP-------WCGHCQALAPEYAAAATELKSANESVVLAKVDA-------TEEN 157 (510)
Q Consensus 94 ~v~~l~~~~~~~~~~~--~~~~~v~f~a~-------wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~-------~~~~ 157 (510)
.+...+.++|++.+.. +++++|+|||+ ||++|+.+.|.|.++++++++ ++.|+.||+ +.++
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~---~~~~~~vd~~~~~~~~d~~~ 82 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE---GCVFIYCQVGEKPYWKDPNN 82 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT---TEEEEEEECCCHHHHHCTTC
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC---CcEEEEEECCCchhhhchhH
Confidence 3566788999998865 89999999999 999999999999999988765 699999999 7888
Q ss_pred HHHHhCCCCcccEEEEEeCCee-eeecCCCCHHHHHHHHHH
Q 010469 158 ELAHEYDVQGFPTIYFFVDGQH-KAYNGGRTKDAIVTWIKK 197 (510)
Q Consensus 158 ~~~~~~~v~~~P~~~~~~~g~~-~~y~g~~~~~~l~~~i~~ 197 (510)
.++++|+|.++||+++|++|.. ..+.| .+.+.+.+|+.+
T Consensus 83 ~~~~~~~i~~~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 83 DFRKNLKVTAVPTLLKYGTPQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHHHHCCCSSSEEEETTSSCEEEGGGG-GCHHHHHHHHHC
T ss_pred HHHHHCCCCeeCEEEEEcCCceEecccc-CCHHHHHHHHhc
Confidence 9999999999999999988743 34444 567888888763
No 114
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.62 E-value=1.2e-16 Score=157.64 Aligned_cols=105 Identities=26% Similarity=0.423 Sum_probs=87.4
Q ss_pred CCCcEEeChhcHHHHHhCC--CeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCC-----CeEEEEEeCcccHHHHHhCC
Q 010469 92 DKDVVVLKERNFSDVIENN--KFVMVEFYAPWCGHCQALAPEYAAAATELKSANE-----SVVLAKVDATEENELAHEYD 164 (510)
Q Consensus 92 ~~~v~~l~~~~~~~~~~~~--~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~-----~v~~~~vd~~~~~~~~~~~~ 164 (510)
...|..|+.++|++++..+ +++||+|||+||++|+.+.|.|+++++.++.... .+.|+.|||++++++|++|+
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~ 101 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYD 101 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcC
Confidence 4579999999999988643 7999999999999999999999999999874321 59999999999999999999
Q ss_pred CCcccEEEEEeCC---eeeeecCCCCHHHHHHHHHH
Q 010469 165 VQGFPTIYFFVDG---QHKAYNGGRTKDAIVTWIKK 197 (510)
Q Consensus 165 v~~~P~~~~~~~g---~~~~y~g~~~~~~l~~~i~~ 197 (510)
|.++||+++|++| ....|.|.++.+.+ .|+.+
T Consensus 102 V~~~PTlilf~~gg~~~~~~y~G~r~~e~L-~fI~k 136 (470)
T 3qcp_A 102 INFVPRLFFFYPRDSCRSNEECGTSSLEHV-AFENS 136 (470)
T ss_dssp CCSSCEEEEEEESSCCCTTSCCCCCCEEEE-ECSCT
T ss_pred CCccCeEEEEECCCceEEEEeeCCCCHHHH-HHHHH
Confidence 9999999999754 35678887665544 44433
No 115
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.61 E-value=3.4e-15 Score=116.28 Aligned_cols=96 Identities=20% Similarity=0.286 Sum_probs=81.6
Q ss_pred cEEe-ChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHH----HHHhCCCC-cc
Q 010469 95 VVVL-KERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE----LAHEYDVQ-GF 168 (510)
Q Consensus 95 v~~l-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~----~~~~~~v~-~~ 168 (510)
...| +.++|+++++++++++|.|+|+||++|+...|.|+++++. . ++.++.||.++.++ ++.++||+ ..
T Consensus 8 ~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~---~v~~~~vdVde~r~~Sn~IA~~~~V~h~s 82 (112)
T 3iv4_A 8 AIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--R---DMDGYYLIVQQERDLSDYIAKKTNVKHES 82 (112)
T ss_dssp EEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--H---TCCEEEEEGGGGHHHHHHHHHHHTCCCCS
T ss_pred eeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--C---CceEEEEEeecCchhhHHHHHHhCCccCC
Confidence 3444 4577999998899999999999999999999999999974 3 59999999999977 79999999 49
Q ss_pred cEEEEEeCCee--eeecCCCCHHHHHHHH
Q 010469 169 PTIYFFVDGQH--KAYNGGRTKDAIVTWI 195 (510)
Q Consensus 169 P~~~~~~~g~~--~~y~g~~~~~~l~~~i 195 (510)
|++++|++|+. ..-.+..+.+.|.+.+
T Consensus 83 Pq~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 83 PQAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp SEEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred CeEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 99999999944 3467888888887654
No 116
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.61 E-value=1.8e-15 Score=125.64 Aligned_cols=104 Identities=13% Similarity=0.179 Sum_probs=94.3
Q ss_pred cEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCc--ccEEE
Q 010469 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQG--FPTIY 172 (510)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~--~P~~~ 172 (510)
+.++|..+|++.+..+.+++|.|||+ |++|+.+.|.++++|+++++ ++.|+.||.++++.++..|||++ +|+++
T Consensus 8 v~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g---k~~f~~vd~d~~~~~a~~~gi~~~~iPtl~ 83 (133)
T 2djk_A 8 IGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRG---VINFGTIDAKAFGAHAGNLNLKTDKFPAFA 83 (133)
T ss_dssp SEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT---TSEEEEECTTTTGGGTTTTTCCSSSSSEEE
T ss_pred eeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC---eEEEEEEchHHhHHHHHHcCCCcccCCEEE
Confidence 77899999999888888999999999 89999999999999999987 79999999999999999999999 99999
Q ss_pred EEeC--Ceeeeec--CCCCHHHHHHHHHHHcCCC
Q 010469 173 FFVD--GQHKAYN--GGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 173 ~~~~--g~~~~y~--g~~~~~~l~~~i~~~~~~~ 202 (510)
+|++ |+.+... |..+.+.|.+|++..+...
T Consensus 84 i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gk 117 (133)
T 2djk_A 84 IQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGK 117 (133)
T ss_dssp EECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTC
T ss_pred EEecCcCcccCCCCccccCHHHHHHHHHHHHcCC
Confidence 9986 6556665 9999999999999887443
No 117
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.61 E-value=3e-15 Score=153.62 Aligned_cols=115 Identities=34% Similarity=0.647 Sum_probs=99.0
Q ss_pred CCccCCCCcEEeChhcHHHHH-hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCC
Q 010469 87 EPEIDDKDVVVLKERNFSDVI-ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDV 165 (510)
Q Consensus 87 ~~~~~~~~v~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v 165 (510)
.|....+.|..|++++|+..+ ..+++++|+|||+||++|+.+.|.|+++++.++....++.++.+|++.+... . ++|
T Consensus 352 ~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v 429 (504)
T 2b5e_A 352 IFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR-G-VVI 429 (504)
T ss_dssp CCCCCSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCC
T ss_pred CCccccccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccc-c-CCc
Confidence 344456789999999999876 4578999999999999999999999999999973234699999999887644 4 999
Q ss_pred CcccEEEEEeCC-e--eeeecCCCCHHHHHHHHHHHcCCCc
Q 010469 166 QGFPTIYFFVDG-Q--HKAYNGGRTKDAIVTWIKKKIGPGI 203 (510)
Q Consensus 166 ~~~P~~~~~~~g-~--~~~y~g~~~~~~l~~~i~~~~~~~~ 203 (510)
.++||+++|++| . ..+|.|.++.+.+.+||.+.+...+
T Consensus 430 ~~~Pt~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~~~~~~ 470 (504)
T 2b5e_A 430 EGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGHFDV 470 (504)
T ss_dssp SSSSEEEEECCTTSCCCCBCCSCCCHHHHHHHHHHHCTTCC
T ss_pred eecCeEEEEeCCceecceEecCCCCHHHHHHHHHhcCCCCC
Confidence 999999999988 4 6789999999999999999987654
No 118
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.59 E-value=1.6e-16 Score=131.57 Aligned_cols=105 Identities=32% Similarity=0.619 Sum_probs=89.9
Q ss_pred CCcEEe-ChhcHHHHHh----CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCc
Q 010469 93 KDVVVL-KERNFSDVIE----NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQG 167 (510)
Q Consensus 93 ~~v~~l-~~~~~~~~~~----~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~ 167 (510)
..+..+ +.++|++.+. ++++++|.||++||++|+.+.|.|.++++.+. ++.++.||++++++++++|+|.+
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~~~~~~~~~~v~~ 89 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP----GAVFLKVDVDELKEVAEKYNVEA 89 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT----TBCCEECCTTTSGGGHHHHTCCS
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CCEEEEEeccchHHHHHHcCCCc
Confidence 345666 4588988775 47899999999999999999999999998875 48999999999999999999999
Q ss_pred ccEEEEEeCCee-eeecCCCCHHHHHHHHHHHcCCC
Q 010469 168 FPTIYFFVDGQH-KAYNGGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 168 ~P~~~~~~~g~~-~~y~g~~~~~~l~~~i~~~~~~~ 202 (510)
+|+++++++|+. .++.| .+.+.+.++|.+.+...
T Consensus 90 ~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~~ 124 (130)
T 1wmj_A 90 MPTFLFIKDGAEADKVVG-ARKDDLQNTIVKHVGAT 124 (130)
T ss_dssp SCCCCBCTTTTCCBCCCT-TCTTTHHHHHHHHTSSS
T ss_pred cceEEEEeCCeEEEEEeC-CCHHHHHHHHHHHHhcc
Confidence 999999988844 56778 57889999999888543
No 119
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.59 E-value=2.5e-15 Score=130.89 Aligned_cols=99 Identities=13% Similarity=0.249 Sum_probs=80.2
Q ss_pred eChhcHHHHH----hCCCeEEEEEECCCChHHhhhhHHH---HHHHHHHhhcCCCeEEEEEeCcccHHH-----------
Q 010469 98 LKERNFSDVI----ENNKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVDATEENEL----------- 159 (510)
Q Consensus 98 l~~~~~~~~~----~~~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~~~~~~----------- 159 (510)
++..+|++.+ .++++++|+|||+||++|+.+.+.+ .++.+.+++ ++.++.||+++..++
T Consensus 31 ~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~---~~~~v~v~~d~~~~~~~~~~~~~~~~ 107 (172)
T 3f9u_A 31 AKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN---DYVLITLYVDNKTPLTEPVKIMENGT 107 (172)
T ss_dssp CCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH---HCEEEEEETTCCCEEEEEEEEEETTE
T ss_pred cchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC---CEEEEEEecCcccccchhhhhhhcch
Confidence 4556676655 6789999999999999999975444 666666665 699999999877654
Q ss_pred ---------------HHhCCCCcccEEEEE-eCCe-eeeecCCCC-HHHHHHHHHHHc
Q 010469 160 ---------------AHEYDVQGFPTIYFF-VDGQ-HKAYNGGRT-KDAIVTWIKKKI 199 (510)
Q Consensus 160 ---------------~~~~~v~~~P~~~~~-~~g~-~~~y~g~~~-~~~l~~~i~~~~ 199 (510)
+++|+|.++|++++| ++|+ ..++.|..+ .+.+.++|.+.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 108 ERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 789999999999999 5884 457889998 999999998876
No 120
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.57 E-value=1.4e-14 Score=123.55 Aligned_cols=94 Identities=22% Similarity=0.413 Sum_probs=78.3
Q ss_pred HHHHHhCCCeEEEEEE-CCCChHHhhhhHHH---HHHHHHHhhcCCCeEEEEEeCcccH-----------HHHHhCCCCc
Q 010469 103 FSDVIENNKFVMVEFY-APWCGHCQALAPEY---AAAATELKSANESVVLAKVDATEEN-----------ELAHEYDVQG 167 (510)
Q Consensus 103 ~~~~~~~~~~~~v~f~-a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~~~~-----------~~~~~~~v~~ 167 (510)
+.....++++++|+|| |+||++|+.+.|.+ .++.+.+.. ++.++.||+++.+ +++++|+|.+
T Consensus 40 ~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~---~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~ 116 (154)
T 2ju5_A 40 LEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV---HLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTG 116 (154)
T ss_dssp HHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH---HCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC---cEEEEEecCccccCCChhhHhhHHHHHHHcCCCC
Confidence 3333356899999999 99999999999999 777666544 6999999997653 8999999999
Q ss_pred ccEEEEE-eCCe-eeeecCCC--CHHHHHHHHHHHcC
Q 010469 168 FPTIYFF-VDGQ-HKAYNGGR--TKDAIVTWIKKKIG 200 (510)
Q Consensus 168 ~P~~~~~-~~g~-~~~y~g~~--~~~~l~~~i~~~~~ 200 (510)
+|++++| .+|+ ..++ |.. +.+.+.++|.+.+.
T Consensus 117 ~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 117 FPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp SSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 9999999 5884 4567 988 89999999988764
No 121
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.57 E-value=6.8e-15 Score=134.62 Aligned_cols=101 Identities=20% Similarity=0.290 Sum_probs=89.5
Q ss_pred CcEEeChhcHHHHHhCCCeE-EEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEE
Q 010469 94 DVVVLKERNFSDVIENNKFV-MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (510)
Q Consensus 94 ~v~~l~~~~~~~~~~~~~~~-~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~ 172 (510)
.+..+++++|+.++..++++ +|.||++||++|+.+.|.|+++++.+ + ++.++.||++++++++++|+|.++|+++
T Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 194 (229)
T 2ywm_A 119 RKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-D---YITSKVIDASENQDLAEQFQVVGVPKIV 194 (229)
T ss_dssp TCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-T---TEEEEEEEGGGCHHHHHHTTCCSSSEEE
T ss_pred CccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-C---CeEEEEEECCCCHHHHHHcCCcccCEEE
Confidence 35678899999887666555 88999999999999999999999987 3 5999999999999999999999999999
Q ss_pred EEeCCeeeeecCCCCHHHHHHHHHHHcC
Q 010469 173 FFVDGQHKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 173 ~~~~g~~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
+ +|+..+|.|..+.+.+.+|+.+.+.
T Consensus 195 ~--~G~~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 195 I--NKGVAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp E--GGGTEEEESCCCHHHHHHHHHHHHH
T ss_pred E--CCEEEEeeCCCCHHHHHHHHHHHhh
Confidence 8 7876679999999999999988763
No 122
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.56 E-value=1.4e-15 Score=120.36 Aligned_cols=76 Identities=22% Similarity=0.400 Sum_probs=64.2
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc------ccHHHHHhCCCCcccEEEEEeCCeeeee
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT------EENELAHEYDVQGFPTIYFFVDGQHKAY 182 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~------~~~~~~~~~~v~~~P~~~~~~~g~~~~y 182 (510)
.+++++|+|||+||++|+.+.|.|+++++.++ .|||+ ++++++++|+|+++||+++ +|+. |
T Consensus 11 ~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~---------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~~--~ 77 (106)
T 3kp8_A 11 LRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP---------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGRT--Y 77 (106)
T ss_dssp HHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC---------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTEE--E
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC---------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCEE--e
Confidence 35677999999999999999999999985542 46666 6789999999999999777 8863 8
Q ss_pred cCCCCHHHHHHHHHH
Q 010469 183 NGGRTKDAIVTWIKK 197 (510)
Q Consensus 183 ~g~~~~~~l~~~i~~ 197 (510)
.|..+.+.|.+|+..
T Consensus 78 ~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 78 TGVRSLEALAVASGY 92 (106)
T ss_dssp ESCCCHHHHHHHHTC
T ss_pred cCCCCHHHHHHHhCC
Confidence 899999999998753
No 123
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.55 E-value=1.4e-14 Score=120.68 Aligned_cols=101 Identities=21% Similarity=0.401 Sum_probs=82.4
Q ss_pred cEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-------------------
Q 010469 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE------------------- 155 (510)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~------------------- 155 (510)
+..++++.+......+++++|.||++||++|+.+.|.+.++++++. ++.++.|++++
T Consensus 9 l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 84 (136)
T 1lu4_A 9 ATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP----AVTFVGIATRADVGAMQSFVSKYNLNFTNL 84 (136)
T ss_dssp EEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHHTCCSEEE
T ss_pred eecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC----CcEEEEEEcCCCHHHHHHHHHHcCCCceEE
Confidence 3334444444333367899999999999999999999999999886 48899999877
Q ss_pred ---cHHHHHhCCCCcccEEEEEe-CCeeeeec---CCCCHHHHHHHHHHHc
Q 010469 156 ---ENELAHEYDVQGFPTIYFFV-DGQHKAYN---GGRTKDAIVTWIKKKI 199 (510)
Q Consensus 156 ---~~~~~~~~~v~~~P~~~~~~-~g~~~~y~---g~~~~~~l~~~i~~~~ 199 (510)
+..+++.|++.++|++++++ +|+...+. |..+.+.+.++|.+.+
T Consensus 85 ~d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 85 NDADGVIWARYNVPWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp ECTTSHHHHHTTCCSSSEEEEECTTSCEEEECCSSSCCCHHHHHHHHHHC-
T ss_pred ECCchhHHHhcCCCCCCEEEEECCCCcEEEEEcCCCccCHHHHHHHHHHHh
Confidence 57889999999999999995 77444888 9999999999998764
No 124
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.55 E-value=3.5e-14 Score=130.49 Aligned_cols=102 Identities=18% Similarity=0.270 Sum_probs=86.0
Q ss_pred eChhcHHHHHh-CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhc-CCCeEEEEEeCcccHHHHHhCCCCcccEEEEEe
Q 010469 98 LKERNFSDVIE-NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSA-NESVVLAKVDATEENELAHEYDVQGFPTIYFFV 175 (510)
Q Consensus 98 l~~~~~~~~~~-~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~ 175 (510)
++++.++.+.+ .++++++.|||+||++|+.+.|.|++++..++.. ..++.++.||++.+++++++|+|.++||+++
T Consensus 125 l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i-- 202 (243)
T 2hls_A 125 LEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI-- 202 (243)
T ss_dssp CCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--
T ss_pred CCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--
Confidence 45555655543 4667899999999999999999999999998421 1369999999999999999999999999988
Q ss_pred CCeeeeecCCCCHHHHHHHHHHHcCCC
Q 010469 176 DGQHKAYNGGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 176 ~g~~~~y~g~~~~~~l~~~i~~~~~~~ 202 (510)
+|... |.|.++.+.+.++|.+.++..
T Consensus 203 ~G~~~-~~G~~~~~~l~~~l~~~~~~~ 228 (243)
T 2hls_A 203 NGYLV-FVGVPYEEDFLDYVKSAAEGR 228 (243)
T ss_dssp TTEEE-EESCCCHHHHHHHHHHHHTTC
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHhhcc
Confidence 78654 999999999999999998764
No 125
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.55 E-value=4.5e-14 Score=119.43 Aligned_cols=103 Identities=15% Similarity=0.327 Sum_probs=87.6
Q ss_pred EEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc---------------------
Q 010469 96 VVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT--------------------- 154 (510)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~--------------------- 154 (510)
..++++.+.....++++++|.||++||++|+.+.|.+.++++++.+ .+.++.|+++
T Consensus 15 ~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 91 (148)
T 2b5x_A 15 AWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD---QLNVVAVHMPRSEDDLDPGKIKETAAEHDIT 91 (148)
T ss_dssp EEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---TSEEEEEECCCSTTTSSHHHHHHHHHHTTCC
T ss_pred ccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC---CcEEEEEEcCCCccccCHHHHHHHHHHcCCC
Confidence 4667777776666789999999999999999999999999999977 4888888853
Q ss_pred ------ccHHHHHhCCCCcccEEEEE-eCCe-eeeecCCCCHHHHHHHHHHHcCC
Q 010469 155 ------EENELAHEYDVQGFPTIYFF-VDGQ-HKAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 155 ------~~~~~~~~~~v~~~P~~~~~-~~g~-~~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
.+..+++.|+|.++|+++++ ++|+ ...+.|..+.+.+.++|.+.+..
T Consensus 92 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 92 QPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp SCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHTT
T ss_pred cceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHhc
Confidence 45689999999999999999 5784 45788999999999999988753
No 126
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.55 E-value=4.3e-13 Score=122.14 Aligned_cols=197 Identities=12% Similarity=0.175 Sum_probs=150.3
Q ss_pred CcEEe-ChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEE
Q 010469 94 DVVVL-KERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIY 172 (510)
Q Consensus 94 ~v~~l-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~ 172 (510)
.++.| +.+++++++..+++++|-|+++|| ....+.|.++|+.+ + .+.|+.+. ++++|+++++.+ |+++
T Consensus 10 ~~~~l~s~~~~~~~l~~~~v~vVgff~~~~---~~~~~~f~~~A~~l-~---~~~F~~t~---~~~v~~~~~v~~-p~i~ 78 (227)
T 4f9z_D 10 EPTWLTDVPAAMEFIAATEVAVIGFFQDLE---IPAVPILHSMVQKF-P---GVSFGIST---DSEVLTHYNITG-NTIC 78 (227)
T ss_dssp CCEECCSHHHHHHHHHTSSEEEEEECSCSC---STHHHHHHHHTTTC-T---TSEEEEEC---CHHHHHHTTCCS-SEEE
T ss_pred CCeeeCCHHHHHHHHhcCCeEEEEEecCCC---chhHHHHHHHHHhC-C---CceEEEEC---CHHHHHHcCCCC-CeEE
Confidence 34555 568999999999999999999985 57889999999988 4 58888754 688999999998 9999
Q ss_pred EEeCC--eeeeecC----CCCHHHHHHHHHHHcCCCcccccchhHHHHhccCCCeEEEEEe-cCCCCc---chHHHHHhc
Q 010469 173 FFVDG--QHKAYNG----GRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYL-NSLVGS---ESEVLADAS 242 (510)
Q Consensus 173 ~~~~g--~~~~y~g----~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~~-~~~~~~---~~~~~~~~~ 242 (510)
+|+++ ....|.| .++.+.|.+||.....|.+.+++. +.+.++.......++++| ...... ....|..+|
T Consensus 79 lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~-~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA 157 (227)
T 4f9z_D 79 LFRLVDNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNP-VTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAA 157 (227)
T ss_dssp EEETTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCH-HHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHH
T ss_pred EEEecCcccccccccccCCCCHHHHHHHHHHhCCCceeecCc-ccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHH
Confidence 99964 5667884 799999999999999998888865 667777766544554444 433222 235566666
Q ss_pred -cccCceeEEEcCCh-----hHHHhhCCCCCCCCCeEEEeccCCCceeeccCCCCCHHHHHHHHHhc
Q 010469 243 -RLEDDVNFYQTTNP-----DVAKIFHLDSKVNRPALVMVKKETEKISYFADGKFDKSTIADFVFSN 303 (510)
Q Consensus 243 -~~~~~~~f~~~~~~-----~l~~~~~~~~~~~~p~l~~~~~~~~~~~~y~~g~~~~~~i~~fi~~~ 303 (510)
++++++.|+.+... .+.+.||+.. ...|+++++...+.....++.++++.+.|.+|+...
T Consensus 158 k~~k~~i~F~~vd~~~~~~~~~l~~fgl~~-~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 158 KLFQGKILFILVDSGMKENGKVISFFKLKE-SQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp HHTTTTCEEEEEETTSGGGHHHHHHTTCCG-GGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred HHhhCCEEEEEeCCccHhHHHHHHHcCCCc-ccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 68888999876542 4778899973 247999999876544444435789999999999853
No 127
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.31 E-value=4.4e-16 Score=128.96 Aligned_cols=98 Identities=24% Similarity=0.382 Sum_probs=82.8
Q ss_pred hcHHHHHhCCCeEEEEEECCCChHHhhhhHHH---HHHHHHHhhcCCCeEEEEEeCc--ccHHHHHhCCCCcccEEEEE-
Q 010469 101 RNFSDVIENNKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVDAT--EENELAHEYDVQGFPTIYFF- 174 (510)
Q Consensus 101 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~~P~~~~~- 174 (510)
+.+.....++++++|+||++||++|+.+.|.+ .++++.+++ ++.++.||++ ++..++++|+|.++|++++|
T Consensus 10 ~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d 86 (130)
T 2lst_A 10 EALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA---RFVVASVSVDTPEGQELARRYRVPGTPTFVFLV 86 (130)
Confidence 34445556788999999999999999999999 888887766 6889999994 56889999999999999999
Q ss_pred -eCCe---eeeecCCCCHHHHHHHHHHHcCC
Q 010469 175 -VDGQ---HKAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 175 -~~g~---~~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
++|+ ..++.|..+.+.+.++|.+.+..
T Consensus 87 ~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 87 PKAGAWEEVGRLFGSRPRAEFLKELRQVCVK 117 (130)
Confidence 5674 45789999999999999887743
No 128
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.54 E-value=3.1e-14 Score=118.48 Aligned_cols=102 Identities=21% Similarity=0.362 Sum_probs=83.0
Q ss_pred cEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-------------------
Q 010469 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE------------------- 155 (510)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~------------------- 155 (510)
+..++++.+......+++++|.||++||++|+.+.|.+.+++++++ ++.++.|++++
T Consensus 10 ~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 85 (136)
T 1zzo_A 10 AKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP----EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQ 85 (136)
T ss_dssp EEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHTTCTTSEE
T ss_pred cccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC----CeEEEEEeCCCCHHHHHHHHHHcCCCceEE
Confidence 3444455544433467899999999999999999999999999886 48888898843
Q ss_pred ----cHHHHHhCCCCcccEEEEEe-CCeeeeecCCCCHHHHHHHHHHHcC
Q 010469 156 ----ENELAHEYDVQGFPTIYFFV-DGQHKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 156 ----~~~~~~~~~v~~~P~~~~~~-~g~~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
+..+++.|+|.++|++++++ +|+...+.|..+.+.+.++|.+.+.
T Consensus 86 ~~d~~~~~~~~~~i~~~P~~~~id~~g~i~~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 86 LADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp EECTTCHHHHHTTCCSSSEEEEECTTCCEEEEESCCCHHHHHHHHHHHC-
T ss_pred EEcCCcHHHHHcCCCCCceEEEECCCCCEEEEecCCCHHHHHHHHHHHhc
Confidence 56789999999999999995 7744489999999999999988763
No 129
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.53 E-value=2.3e-14 Score=123.65 Aligned_cols=105 Identities=18% Similarity=0.346 Sum_probs=85.5
Q ss_pred CcEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeC--------------------
Q 010469 94 DVVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA-------------------- 153 (510)
Q Consensus 94 ~v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~-------------------- 153 (510)
.+..++++.+.....++++++|+||++||++|+.+.|.|.+++++++.. ++.++.|++
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~~~~~~~~~~~~~~~~~~~~~ 99 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS--SANLITVASPGFLHEKKDGEFQKWYAGLN 99 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT--TSEEEEEECTTSTTCCCTTHHHHHHTTSC
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC--CcEEEEEEcCCCccccCHHHHHHHHHhCC
Confidence 4666777777765567899999999999999999999999999988663 355555543
Q ss_pred --------cccHHHHHhCCCCcccEEEEE-eCC-eeeeecCCCCHHHHHHHHHHHcC
Q 010469 154 --------TEENELAHEYDVQGFPTIYFF-VDG-QHKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 154 --------~~~~~~~~~~~v~~~P~~~~~-~~g-~~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
+.+..++++|+|.++|+++++ ++| ....+.|..+.+.+.++|.+.+.
T Consensus 100 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 100 YPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp CTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred CCcceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 345678999999999999999 578 44678899999999999988764
No 130
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.52 E-value=6.1e-15 Score=127.07 Aligned_cols=96 Identities=21% Similarity=0.370 Sum_probs=78.5
Q ss_pred hcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHH-HHHhCCC--CcccEEEEE-eC
Q 010469 101 RNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE-LAHEYDV--QGFPTIYFF-VD 176 (510)
Q Consensus 101 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~-~~~~~~v--~~~P~~~~~-~~ 176 (510)
+.++.....++++||+|||+||++|+.+.|.|.++++.+.. ++.|+.||++.++. ++..+++ .++||+++| .+
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~---~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~ 113 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISEL---SHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPS 113 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH---HTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTT
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc---CCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCC
Confidence 56667777889999999999999999999999998876654 46677788877766 7888888 669999999 58
Q ss_pred Cee-eeecCC----------CCHHHHHHHHHHHc
Q 010469 177 GQH-KAYNGG----------RTKDAIVTWIKKKI 199 (510)
Q Consensus 177 g~~-~~y~g~----------~~~~~l~~~i~~~~ 199 (510)
|+. .++.|. .+.+.+.++|++.+
T Consensus 114 G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 114 GKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp SCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 844 467774 78899999998776
No 131
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.52 E-value=2.2e-14 Score=113.46 Aligned_cols=90 Identities=14% Similarity=0.196 Sum_probs=69.7
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc--HHHHHhCCCCcccEEEEEeCC-eeeeecCC
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE--NELAHEYDVQGFPTIYFFVDG-QHKAYNGG 185 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~--~~~~~~~~v~~~P~~~~~~~g-~~~~y~g~ 185 (510)
+...++|+|||+||++|+.+.+.+....+.... ...+.+..||.+++ .+++.+++|.++||+++|++| ...+..|.
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~-~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~ 95 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDE-GRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGY 95 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHH-HHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhh-cccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCC
Confidence 456899999999999999998755433221100 01267788888775 578899999999999999999 44689999
Q ss_pred CCHHHHHHHHHHHc
Q 010469 186 RTKDAIVTWIKKKI 199 (510)
Q Consensus 186 ~~~~~l~~~i~~~~ 199 (510)
...+.+..||.+.+
T Consensus 96 ~~~~~f~~~L~~~l 109 (116)
T 3dml_A 96 PGEDFFWPMLARLI 109 (116)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999998765
No 132
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.51 E-value=8.7e-14 Score=118.28 Aligned_cols=92 Identities=16% Similarity=0.292 Sum_probs=78.9
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc------------------------cHHHHHhCC
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE------------------------ENELAHEYD 164 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~------------------------~~~~~~~~~ 164 (510)
++++++|+||++||++|+.+.|.|.++++++++ .++.++.|+++. ...+++.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~--~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKK--GSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYG 100 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCT--TTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc--CCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhC
Confidence 679999999999999999999999999999865 369999999863 345778898
Q ss_pred --CCcccEEEEEe-CC-eeeeecCCCCHHHHHHHHHHHcCCC
Q 010469 165 --VQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 165 --v~~~P~~~~~~-~g-~~~~y~g~~~~~~l~~~i~~~~~~~ 202 (510)
+.++|++++++ +| ....+.|..+.+.+.++|++.....
T Consensus 101 ~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~ 142 (151)
T 3raz_A 101 NTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKC 142 (151)
T ss_dssp CCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC-
T ss_pred CccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 99999999995 77 5578999999999999999887553
No 133
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.50 E-value=1.4e-13 Score=118.86 Aligned_cols=105 Identities=22% Similarity=0.443 Sum_probs=85.9
Q ss_pred cEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhC-----------
Q 010469 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEY----------- 163 (510)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~----------- 163 (510)
+..++++.+......+++++|.||++||++|+.+.|.+.++++++++ .++.++.|++++.++.++++
T Consensus 19 l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~--~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~ 96 (165)
T 3or5_A 19 GVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWAS--RGFTFVGIAVNEQLPNVKNYMKTQGIIYPVM 96 (165)
T ss_dssp EECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TTEEEEEEECSCCHHHHHHHHHHHTCCSCEE
T ss_pred eeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceE
Confidence 34445555443334678999999999999999999999999999987 35999999998877666665
Q ss_pred ----------------CCCcccEEEEEe-CCe-eeeecCCCCHHHHHHHHHHHcCC
Q 010469 164 ----------------DVQGFPTIYFFV-DGQ-HKAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 164 ----------------~v~~~P~~~~~~-~g~-~~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
++.++|+++++. +|+ ...+.|..+.+.+.++|.+.+..
T Consensus 97 ~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 97 MATPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp ECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC-
T ss_pred ecCHHHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 899999999994 784 46888999999999999998854
No 134
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.50 E-value=1.1e-13 Score=117.65 Aligned_cols=92 Identities=25% Similarity=0.481 Sum_probs=79.5
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc----------------------cHHHHHhCCCC
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------ENELAHEYDVQ 166 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------~~~~~~~~~v~ 166 (510)
.+++++|.||++||++|+.+.|.+.++++++++ .++.++.|+++. +..+++.|+|.
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~--~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 102 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKS--QGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVS 102 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG--GTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc--CCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCC
Confidence 578999999999999999999999999999977 358888888865 34789999999
Q ss_pred cccEEEEE-eCCe-eeeecCCCCHHHHHHHHHHHcCCC
Q 010469 167 GFPTIYFF-VDGQ-HKAYNGGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 167 ~~P~~~~~-~~g~-~~~y~g~~~~~~l~~~i~~~~~~~ 202 (510)
++|+++++ .+|+ ...+.|..+.+.+.++|.+.+...
T Consensus 103 ~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 103 PLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp SSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred CCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 99999999 4784 457889999999999999988553
No 135
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.50 E-value=5.2e-14 Score=120.75 Aligned_cols=94 Identities=12% Similarity=0.116 Sum_probs=72.3
Q ss_pred eChhcHHHHHh-CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCC---CCcccEEEE
Q 010469 98 LKERNFSDVIE-NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYD---VQGFPTIYF 173 (510)
Q Consensus 98 l~~~~~~~~~~-~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~---v~~~P~~~~ 173 (510)
++++.+..+.. ++++++|+|||+||+||+.+.|.+.++++.+. ++.++.||.+++++++.+|. +.++||+++
T Consensus 41 ~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~----~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~ 116 (167)
T 1z6n_A 41 LPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP----NIELAIISKGRAEDDLRQRLALERIAIPLVLV 116 (167)
T ss_dssp CCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT----TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEE
T ss_pred CCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEE
Confidence 45555554432 56899999999999999999999999998763 49999999999999999887 999999999
Q ss_pred EeCC-eeeeecCCCCHHHHHHHHH
Q 010469 174 FVDG-QHKAYNGGRTKDAIVTWIK 196 (510)
Q Consensus 174 ~~~g-~~~~y~g~~~~~~l~~~i~ 196 (510)
|++| +.....|.... .+...+.
T Consensus 117 ~~~~G~~~~~~g~~p~-~~~~~i~ 139 (167)
T 1z6n_A 117 LDEEFNLLGRFVERPQ-AVLDGGP 139 (167)
T ss_dssp ECTTCCEEEEEESSCH-HHHHHCH
T ss_pred ECCCCCEEEEEcCCCH-HHHHhHH
Confidence 9865 55444465543 3333333
No 136
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.49 E-value=2.6e-13 Score=116.44 Aligned_cols=102 Identities=16% Similarity=0.252 Sum_probs=82.4
Q ss_pred eChhcHHHHHhCCCeEEEEEECCCChHHhhh-hHHHHHHHHHHhhcCCCeEEEEEeCc----------------------
Q 010469 98 LKERNFSDVIENNKFVMVEFYAPWCGHCQAL-APEYAAAATELKSANESVVLAKVDAT---------------------- 154 (510)
Q Consensus 98 l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~-~p~~~~~~~~~~~~~~~v~~~~vd~~---------------------- 154 (510)
++++.+...-..+++++|+||++||++|+.+ .|.+.++++++++. ++.++.|+++
T Consensus 18 ~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~--~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (160)
T 3lor_A 18 VNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES--QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIK 95 (160)
T ss_dssp SSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT--TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCC
T ss_pred cCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC--CcEEEEEeccccccccCCHHHHHHHHHHcCCC
Confidence 3444444333368999999999999999995 99999999999773 5888888862
Q ss_pred ------ccHH------HHHhCCCCcccEEEEEe-CC-eeeeecCCCCHHHHHHHHHHHcCC
Q 010469 155 ------EENE------LAHEYDVQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 155 ------~~~~------~~~~~~v~~~P~~~~~~-~g-~~~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
.... +++.|+|.++|++++++ +| ....+.|..+.+.+.++|.+.+..
T Consensus 96 ~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 96 FPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp SCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred CcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 2233 88999999999999996 78 446888999999999999988754
No 137
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.48 E-value=8.8e-14 Score=103.34 Aligned_cols=74 Identities=24% Similarity=0.424 Sum_probs=64.8
Q ss_pred EEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEEeCCeeeeecCCC-CHHHH
Q 010469 113 VMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQHKAYNGGR-TKDAI 191 (510)
Q Consensus 113 ~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~~g~~~~y~g~~-~~~~l 191 (510)
..|.||++||++|+.+.|.|+++++++.+ ++.++.|| +++++++|+|.++|++++ +|+.... |.. +.+.+
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~---~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~~~~~-G~~~~~~~l 72 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI---DAEFEKIK---EMDQILEAGLTALPGLAV--DGELKIM-GRVASKEEI 72 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC---CEEEEEEC---SHHHHHHHTCSSSSCEEE--TTEEEEC-SSCCCHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC---ceEEEEec---CHHHHHHCCCCcCCEEEE--CCEEEEc-CCCCCHHHH
Confidence 36899999999999999999999998865 69999998 788999999999999988 8865544 887 88998
Q ss_pred HHHH
Q 010469 192 VTWI 195 (510)
Q Consensus 192 ~~~i 195 (510)
.+|+
T Consensus 73 ~~~l 76 (77)
T 1ilo_A 73 KKIL 76 (77)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8875
No 138
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.47 E-value=3.4e-13 Score=115.52 Aligned_cols=91 Identities=14% Similarity=0.293 Sum_probs=77.6
Q ss_pred CCCeEEEEEECCCChHHhhh-hHHHHHHHHHHhhcCCCeEEEEEeCc----------------------------ccH--
Q 010469 109 NNKFVMVEFYAPWCGHCQAL-APEYAAAATELKSANESVVLAKVDAT----------------------------EEN-- 157 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~-~p~~~~~~~~~~~~~~~v~~~~vd~~----------------------------~~~-- 157 (510)
.+++++|+||++||++|+.+ +|.+.++++++++ .++.++.|+++ ...
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 104 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPE--DKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDG 104 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCT--TTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCc--CCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccch
Confidence 57899999999999999997 9999999999975 35889888863 112
Q ss_pred ---HHHHhCCCCcccEEEEEe-CCe-eeeecCCCCHHHHHHHHHHHcCC
Q 010469 158 ---ELAHEYDVQGFPTIYFFV-DGQ-HKAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 158 ---~~~~~~~v~~~P~~~~~~-~g~-~~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
.+++.|+|.++|+++++. +|+ ..++.|..+.+.+.++|.+.+..
T Consensus 105 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 105 AMPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp SSCHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred hhHHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 588999999999999995 784 46888999999999999988754
No 139
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.47 E-value=2.1e-13 Score=116.02 Aligned_cols=92 Identities=15% Similarity=0.434 Sum_probs=80.6
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccH-----------------------HHHHhCCC
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEEN-----------------------ELAHEYDV 165 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~-----------------------~~~~~~~v 165 (510)
.+++++|.||++||++|+.+.|.+.++++++.+ .++.++.|+++... .+++.|+|
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAG--KDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLI 106 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTT--SSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTC
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhcc--CCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCc
Confidence 578999999999999999999999999999876 35999999988764 78899999
Q ss_pred CcccEEEEEe-CCe-eeeecCCCCHHHHHHHHHHHcCCC
Q 010469 166 QGFPTIYFFV-DGQ-HKAYNGGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 166 ~~~P~~~~~~-~g~-~~~y~g~~~~~~l~~~i~~~~~~~ 202 (510)
.++|++++++ +|+ ...+.|..+.+.+.++|.+.....
T Consensus 107 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 107 NGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp CSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCC
T ss_pred CCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccc
Confidence 9999999997 784 456788889999999999988654
No 140
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.45 E-value=3.9e-13 Score=113.17 Aligned_cols=85 Identities=25% Similarity=0.559 Sum_probs=75.0
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-------------------------cHHHHHhC
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------------------------ENELAHEY 163 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------------------------~~~~~~~~ 163 (510)
.+++++|.||++||++|+.+.|.|.+++++++. .++.++.|+++. +..+++.|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 110 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPS--DSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEY 110 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCC--SSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhc
Confidence 578999999999999999999999999999874 259999998854 56899999
Q ss_pred CCCcccEEEEE-eCCe-eeeecCCCCHHHHHHHH
Q 010469 164 DVQGFPTIYFF-VDGQ-HKAYNGGRTKDAIVTWI 195 (510)
Q Consensus 164 ~v~~~P~~~~~-~~g~-~~~y~g~~~~~~l~~~i 195 (510)
+|.++|+++++ ++|+ ...+.|..+.+.+.++|
T Consensus 111 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 111 HIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp TCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred CcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 99999999999 5784 46889999999999887
No 141
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.45 E-value=9e-12 Score=122.80 Aligned_cols=258 Identities=16% Similarity=0.225 Sum_probs=172.6
Q ss_pred cccccchhHHHHhccCCCeEEEEEecCCCCcc---hHHHHHhc-cc------cCceeEEEcC---ChhHHHhhCCCCCCC
Q 010469 203 IYNITTLDEAERVLTSETKVVLGYLNSLVGSE---SEVLADAS-RL------EDDVNFYQTT---NPDVAKIFHLDSKVN 269 (510)
Q Consensus 203 ~~~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~-~~------~~~~~f~~~~---~~~l~~~~~~~~~~~ 269 (510)
+..++. ++++..+.+++.++|.|+..++... ...+.+++ .+ .+.+.|+.+. +.+++++|++..
T Consensus 7 v~~l~~-~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~--- 82 (382)
T 2r2j_A 7 ITSLDT-ENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISK--- 82 (382)
T ss_dssp -CBCCT-TTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCE---
T ss_pred eEECCH-HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCc---
Confidence 555554 6787788778888889999988664 34455555 34 3457888753 578999999997
Q ss_pred CCeEEEeccCCCceeeccCCCCCHHHHHHHHHhcCCCceeecCC-CchhhhccCCccceEEEEEeccchhhHHHHHHHHH
Q 010469 270 RPALVMVKKETEKISYFADGKFDKSTIADFVFSNKLPLVTIFTR-ENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEAA 348 (510)
Q Consensus 270 ~p~l~~~~~~~~~~~~y~~g~~~~~~i~~fi~~~~~p~~~~lt~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~A 348 (510)
.|++++|+.+......| .|..+.+.|.+||....-|.+..++. +.+.. +... ...++.|....+ ......|.++|
T Consensus 83 ~Pt~~~f~~G~~~~~~~-~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~-~~~~v~ff~~~~-~~~~~~f~~~A 158 (382)
T 2r2j_A 83 YPTLKLFRNGMMMKREY-RGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRS-KRNIIGYFEQKD-SDNYRVFERVA 158 (382)
T ss_dssp ESEEEEEETTEEEEEEC-CSCCSHHHHHHHHHHHHSCCCEEC--------------CCEEEEEESCSS-SHHHHHHHHHH
T ss_pred CCEEEEEeCCcEeeeee-cCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCC-CCEEEEEECCCC-ChhHHHHHHHH
Confidence 89999998654222258 89999999999999999888888854 45655 3333 344444444332 23466899999
Q ss_pred HhccCceEEEEEEcCCcccccchhhhcCCCCCCCcEEEEeeCC-CCCcccCCCCC-CHHHHHHHHHHhhcCcccccccCC
Q 010469 349 KSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGND-DAKKHILDGEL-TLDKIKTFGEDFLEGKLKPFFKSD 426 (510)
Q Consensus 349 ~~~~~~~~f~~vd~~~~~~~~~l~~~~gi~~~~~P~~~i~~~~-~~~~y~~~~~~-t~e~i~~Fi~~~~~Gkl~~~~kSe 426 (510)
..+++++.|+.... .+.+.+++.. .| +++.... ......|.|.+ +.+.|.+|+..-.-
T Consensus 159 ~~~~~~~~F~~~~~-------~~~~~~~v~~--~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~---------- 218 (382)
T 2r2j_A 159 NILHDDCAFLSAFG-------DVSKPERYSG--DN-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCV---------- 218 (382)
T ss_dssp HHHTTTCEEEEEES-------CC----------CE-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHS----------
T ss_pred HHhhccceEEEEeh-------hhHHhhCCCC--Cc-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhccc----------
Confidence 99999999887764 2345677754 36 5555432 23456677888 89999999988542
Q ss_pred CCCCCCCCceEEEeCcchhhHhhccCCcEEEEEeCCCCh-hhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCc
Q 010469 427 PIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCG-HCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE 498 (510)
Q Consensus 427 ~~p~~~~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~-~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~ 498 (510)
..+.+++.+++.+. ...+.+++|.|+.++|. .|..+...+.+++..+++ ++.|+.+|++...
T Consensus 219 -------p~v~elt~~~~~~~-~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~--~i~f~~id~~~~~ 281 (382)
T 2r2j_A 219 -------PLVREITFENGEEL-TEEGLPFLILFHMKEDTESLEIFQNEVARQLISEKG--TINFLHADCDKFR 281 (382)
T ss_dssp -------CSSEECCHHHHHHH-HTTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT--TSEEEEEETTTTH
T ss_pred -------CceEecChhhHHHH-hcCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC--eeEEEEEchHHhH
Confidence 34567888888875 45577899999999984 456666667776666664 8999999988654
No 142
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.44 E-value=2.6e-13 Score=114.68 Aligned_cols=89 Identities=18% Similarity=0.360 Sum_probs=75.9
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHH-------------------------HHHhC
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE-------------------------LAHEY 163 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~-------------------------~~~~~ 163 (510)
.+++++|.||++||++|+.+.|.+.++++++++. ++.++.|++++.++ +++.|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 107 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK--GIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITY 107 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG--TEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC--CEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhc
Confidence 6789999999999999999999999999999873 59999999987766 89999
Q ss_pred CCCcccEEEEEe-CC-eeeeecCCCCHHHHHHHHHHHc
Q 010469 164 DVQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 164 ~v~~~P~~~~~~-~g-~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
+|.++|++++++ +| ...++.|..+.+.+.+.+.+.+
T Consensus 108 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 108 DIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp CCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHHH
T ss_pred CcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHHh
Confidence 999999999994 78 4467788877777777666543
No 143
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.44 E-value=2.4e-13 Score=116.58 Aligned_cols=80 Identities=21% Similarity=0.335 Sum_probs=69.1
Q ss_pred eChhcHHHHHhCCCeEEEEEECCCChHHhhhhH-HH--HHHHHHHhhcCCCeEEEEEeCcccHHHHHhC--------CCC
Q 010469 98 LKERNFSDVIENNKFVMVEFYAPWCGHCQALAP-EY--AAAATELKSANESVVLAKVDATEENELAHEY--------DVQ 166 (510)
Q Consensus 98 l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p-~~--~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~--------~v~ 166 (510)
.+++.|+.....++++||.|||+||++|+.+.| .| .++++.+++ ++.++.||.++.+++.+.| ++.
T Consensus 27 ~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~---~fv~ikVD~de~~~l~~~y~~~~q~~~gv~ 103 (173)
T 3ira_A 27 WGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE---AFVSIKVDREERPDIDNIYMTVCQIILGRG 103 (173)
T ss_dssp SSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH---HCEEEEEETTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh---cCceeeeCCcccCcHHHHHHHHHHHHcCCC
Confidence 456788888888999999999999999999999 33 577777766 6999999999999999888 999
Q ss_pred cccEEEEEe-CCeee
Q 010469 167 GFPTIYFFV-DGQHK 180 (510)
Q Consensus 167 ~~P~~~~~~-~g~~~ 180 (510)
++|++++|. +|+++
T Consensus 104 g~Pt~v~l~~dG~~v 118 (173)
T 3ira_A 104 GWPLNIIMTPGKKPF 118 (173)
T ss_dssp CSSEEEEECTTSCEE
T ss_pred CCcceeeECCCCCce
Confidence 999999997 77543
No 144
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.43 E-value=1.3e-13 Score=115.79 Aligned_cols=98 Identities=18% Similarity=0.151 Sum_probs=67.4
Q ss_pred hcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEEe-CCe-
Q 010469 101 RNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFV-DGQ- 178 (510)
Q Consensus 101 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~-~g~- 178 (510)
+.+.....++++++|.|||+||++|+.+.|.+.+..+.....+.++..+.|| .+..+++.++++.++||+++|+ +|+
T Consensus 35 ~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD-~e~~~~~~~~~v~~~PT~~f~~~~G~~ 113 (151)
T 3ph9_A 35 EGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLM-HETTDKNLSPDGQYVPRIMFVDPSLTV 113 (151)
T ss_dssp HHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEES-SCCSCGGGCTTCCCSSEEEEECTTSCB
T ss_pred HHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEec-CCchhhHhhcCCCCCCEEEEECCCCCE
Confidence 3344555678999999999999999999999987532211100145555555 2345677889999999999998 884
Q ss_pred eeeecCC-------CC---HHHHHHHHHHHc
Q 010469 179 HKAYNGG-------RT---KDAIVTWIKKKI 199 (510)
Q Consensus 179 ~~~y~g~-------~~---~~~l~~~i~~~~ 199 (510)
..+..|. +. .+.+.+.+++.+
T Consensus 114 v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 114 RADIAGRYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp CTTCCCSCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred EEEEeCCcCCcccccchhhHHHHHHHHHHHH
Confidence 4567777 33 355555555544
No 145
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.43 E-value=5.8e-13 Score=113.33 Aligned_cols=102 Identities=19% Similarity=0.341 Sum_probs=81.8
Q ss_pred eChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeC-----------------------c
Q 010469 98 LKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA-----------------------T 154 (510)
Q Consensus 98 l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~-----------------------~ 154 (510)
++++.+...-..+++++|.||++||++|+.+.|.+.++++++++. ++.++.|+. +
T Consensus 16 ~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d 93 (153)
T 2l5o_A 16 LHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK--NFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYD 93 (153)
T ss_dssp TTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT--TEEEEEEECTTSCHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC--CeEEEEEecCCCCHHHHHHHHHHcCCCceEEcC
Confidence 344443332236889999999999999999999999999999873 477776653 3
Q ss_pred ccHHHHHhCCCCcccEEEEEe-CCe-eeeecCCCCHHHHHHHHHHHcCC
Q 010469 155 EENELAHEYDVQGFPTIYFFV-DGQ-HKAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 155 ~~~~~~~~~~v~~~P~~~~~~-~g~-~~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
.+..+++.|+|.++|+++++. +|+ ...+.|..+.+.+.++|.+.+..
T Consensus 94 ~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 142 (153)
T 2l5o_A 94 ADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRN 142 (153)
T ss_dssp SSCHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHC
T ss_pred chHHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 456789999999999999994 774 46789999999999999988754
No 146
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.43 E-value=4.2e-13 Score=111.72 Aligned_cols=87 Identities=31% Similarity=0.497 Sum_probs=74.2
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeC----------------------------cccHHHH
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA----------------------------TEENELA 160 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~----------------------------~~~~~~~ 160 (510)
++++++|.||++||++|+.+.|.+.++++++.+ ++.++.|++ +.+..++
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 97 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD---DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLL 97 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT---TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC---CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHH
Confidence 678999999999999999999999999988654 688888853 2345789
Q ss_pred HhCCCCcccEEEEE-eCC-eeeeecCCCCHHHHHHHHHHH
Q 010469 161 HEYDVQGFPTIYFF-VDG-QHKAYNGGRTKDAIVTWIKKK 198 (510)
Q Consensus 161 ~~~~v~~~P~~~~~-~~g-~~~~y~g~~~~~~l~~~i~~~ 198 (510)
+.|++.++|+++++ ++| ....+.|..+.+.+.++|.+.
T Consensus 98 ~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 98 ETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred HHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 99999999999999 578 446889999999999998753
No 147
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.42 E-value=6.2e-13 Score=113.10 Aligned_cols=87 Identities=20% Similarity=0.404 Sum_probs=72.5
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-------------------------cHHHHHhC
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------------------------ENELAHEY 163 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------------------------~~~~~~~~ 163 (510)
.+++++|.||++||++|+.+.|.+.++++++++ .++.++.|+++. +..+++.|
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~--~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 105 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKD--KGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESY 105 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTT--TTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhcc--CCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHh
Confidence 578999999999999999999999999999987 358999999886 57889999
Q ss_pred CCCcccEEEEEe-CCeee-eecCCCCHHHHHHHHHHHcC
Q 010469 164 DVQGFPTIYFFV-DGQHK-AYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 164 ~v~~~P~~~~~~-~g~~~-~y~g~~~~~~l~~~i~~~~~ 200 (510)
+|.++|++++++ +|+.. .+. +.+.+.++|++.+.
T Consensus 106 ~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 106 CIVGFPHIILVDPEGKIVAKEL---RGDDLYNTVEKFVN 141 (152)
T ss_dssp TCCSSCEEEEECTTSEEEEECC---CTTHHHHHHHHHHT
T ss_pred CCCcCCeEEEECCCCeEEEeeC---CHHHHHHHHHHHHh
Confidence 999999999994 77543 432 44677777777664
No 148
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.42 E-value=5.6e-13 Score=111.90 Aligned_cols=87 Identities=17% Similarity=0.423 Sum_probs=70.8
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHH---HHHHHhhcCCCeEEEEEeCcccHHH------------------------HH
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAA---AATELKSANESVVLAKVDATEENEL------------------------AH 161 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~---~~~~~~~~~~~v~~~~vd~~~~~~~------------------------~~ 161 (510)
.+++++|+||++||++|+.++|.+.+ +++++++ .++.++.|++++.++. ++
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 103 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN--GTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQ 103 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH--TSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTT
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc--CCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHH
Confidence 57999999999999999999999998 8988877 3599999988765543 33
Q ss_pred hCCCCcccEEEEEe-CCeeeeecCCCCHHHHHHHHHHHc
Q 010469 162 EYDVQGFPTIYFFV-DGQHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 162 ~~~v~~~P~~~~~~-~g~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
.|+|.++|++++++ +|+... +..+.+.+.++|.+..
T Consensus 104 ~~~v~~~P~~~lid~~G~i~~--~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 104 LYDIRATPTIYLLDGRKRVIL--KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CSCCCSSSEEEEECTTCBEEE--CSCCHHHHHHHHHC--
T ss_pred HcCCCCCCeEEEECCCCCEEe--cCCCHHHHHHHHHHHc
Confidence 79999999999996 665433 5678899999987654
No 149
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.42 E-value=1.5e-12 Score=110.69 Aligned_cols=84 Identities=11% Similarity=0.181 Sum_probs=71.1
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHH-----------------------HHHhCCC
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE-----------------------LAHEYDV 165 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~-----------------------~~~~~~v 165 (510)
.+++++|+||++||++|+.+.|.|.++++++++. ++.++.|+++...+ +++.|++
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 111 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ--GFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNV 111 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTC
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC--CeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCc
Confidence 5789999999999999999999999999999873 58999999887654 7889999
Q ss_pred CcccEEEEEe-CCe-eeeecCCCCHHHHHHH
Q 010469 166 QGFPTIYFFV-DGQ-HKAYNGGRTKDAIVTW 194 (510)
Q Consensus 166 ~~~P~~~~~~-~g~-~~~y~g~~~~~~l~~~ 194 (510)
.++|++++++ +|+ ..++.|..+.+....-
T Consensus 112 ~~~P~~~lid~~G~i~~~~~g~~~~e~~~~~ 142 (152)
T 2lrt_A 112 TNLPSVFLVNRNNELSARGENIKDLDEAIKK 142 (152)
T ss_dssp CSCSEEEEEETTTEEEEETTTCSCHHHHHHH
T ss_pred ccCceEEEECCCCeEEEecCCHHHHHHHHHH
Confidence 9999999996 784 4577888877665543
No 150
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.42 E-value=1.7e-12 Score=110.25 Aligned_cols=92 Identities=24% Similarity=0.482 Sum_probs=77.1
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccH----------------------HHHHhCCCC
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEEN----------------------ELAHEYDVQ 166 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~----------------------~~~~~~~v~ 166 (510)
.+++++|.||++||++|+.+.|.|.++++++++. ++.++.|+++.++ .+++.|+|.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 104 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK--GFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVK 104 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG--TEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC--CeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCC
Confidence 6789999999999999999999999999999873 4888888887655 678889999
Q ss_pred cccEEEEEe-CCe-eeeecCCC--CHHHHHHHHHHHcCCC
Q 010469 167 GFPTIYFFV-DGQ-HKAYNGGR--TKDAIVTWIKKKIGPG 202 (510)
Q Consensus 167 ~~P~~~~~~-~g~-~~~y~g~~--~~~~l~~~i~~~~~~~ 202 (510)
++|+++++. +|+ ...+.|.. +.+.+.++|.+.+...
T Consensus 105 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 105 GMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp SSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC--
T ss_pred CCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccc
Confidence 999999994 774 45777854 4589999999987653
No 151
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.42 E-value=5.6e-13 Score=113.58 Aligned_cols=87 Identities=22% Similarity=0.392 Sum_probs=76.8
Q ss_pred CeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeC---------------------------cccHHHHHhC
Q 010469 111 KFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA---------------------------TEENELAHEY 163 (510)
Q Consensus 111 ~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~---------------------------~~~~~~~~~~ 163 (510)
++++|.||++||++|+.+.|.+.++++++ + +.++.|++ .....+++.|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~----v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 105 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-G----VPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARF 105 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-C----CCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-C----CeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHh
Confidence 89999999999999999999999999998 4 77788887 3567889999
Q ss_pred CCCcccEEEEEe-CCe-eeeecCCCCHHHHHHHHHHHcCCC
Q 010469 164 DVQGFPTIYFFV-DGQ-HKAYNGGRTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 164 ~v~~~P~~~~~~-~g~-~~~y~g~~~~~~l~~~i~~~~~~~ 202 (510)
++.++|+++++. +|+ ...+.|..+.+.+.++|++.....
T Consensus 106 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 106 KVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp SBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred CCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 999999999995 784 468899999999999999988654
No 152
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.41 E-value=6.9e-13 Score=111.38 Aligned_cols=83 Identities=14% Similarity=0.287 Sum_probs=67.9
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHH---HHHHHhhcCCCeEEEEEeCcccHH------------------------HHH
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAA---AATELKSANESVVLAKVDATEENE------------------------LAH 161 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~---~~~~~~~~~~~v~~~~vd~~~~~~------------------------~~~ 161 (510)
.+++++|+||++||++|+.++|.+.+ +++++++ .++.++.|+.+...+ +++
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~--~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 107 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAA--KKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKN 107 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHT--TSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTT
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhcc--CCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhh
Confidence 46899999999999999999999999 9999977 369999998876643 467
Q ss_pred hCCCCcccEEEEEe-CCeee-eecCCCCHHHHHHHHH
Q 010469 162 EYDVQGFPTIYFFV-DGQHK-AYNGGRTKDAIVTWIK 196 (510)
Q Consensus 162 ~~~v~~~P~~~~~~-~g~~~-~y~g~~~~~~l~~~i~ 196 (510)
.|+|.++|++++++ +|+.. +.. ..+.+.+||+
T Consensus 108 ~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~ 141 (142)
T 3eur_A 108 LYDLRAIPTLYLLDKNKTVLLKDA---TLQKVEQYLA 141 (142)
T ss_dssp CSCCTTCSEEEEECTTCBEEEEEE---CHHHHHHHHH
T ss_pred hcCCCcCCeEEEECCCCcEEecCC---CHHHHHHHHh
Confidence 88999999999996 66433 333 4688888875
No 153
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.41 E-value=1.3e-12 Score=114.90 Aligned_cols=90 Identities=13% Similarity=0.341 Sum_probs=75.6
Q ss_pred hCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCe------EEEEEeCcc-cHHHHHhC-----------------
Q 010469 108 ENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESV------VLAKVDATE-ENELAHEY----------------- 163 (510)
Q Consensus 108 ~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v------~~~~vd~~~-~~~~~~~~----------------- 163 (510)
.+++++||+||++||++|+.+.|.|.++++++++. ++ .++.|+++. .++..+++
T Consensus 57 ~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 134 (183)
T 3lwa_A 57 FENQVVILNAWGQWCAPCRSESDDLQIIHEELQAA--GNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFM 134 (183)
T ss_dssp GTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHC--C---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCG
T ss_pred hCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhc--CCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcch
Confidence 36789999999999999999999999999999883 36 999999987 56555544
Q ss_pred --------CCCcccEEEEEe-CCe-eeeecCCCCHHHHHHHHHHHc
Q 010469 164 --------DVQGFPTIYFFV-DGQ-HKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 164 --------~v~~~P~~~~~~-~g~-~~~y~g~~~~~~l~~~i~~~~ 199 (510)
++.++|+++++. +|+ ...+.|..+.+.+.++|.+.+
T Consensus 135 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 135 TAASLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp GGGGTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHH
T ss_pred HHHHhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 688999988885 774 467889999999999998876
No 154
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.40 E-value=2e-12 Score=110.67 Aligned_cols=102 Identities=22% Similarity=0.449 Sum_probs=79.0
Q ss_pred eChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-------------------cHH
Q 010469 98 LKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------------------ENE 158 (510)
Q Consensus 98 l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------------------~~~ 158 (510)
++++.+...-..+++++|.||++||++|+.+.|.|.++++++++ .++.++.|+++. +..
T Consensus 29 ~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~ 106 (158)
T 3hdc_A 29 LSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPK--GDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQ 106 (158)
T ss_dssp TTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSST--TSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSH
T ss_pred CCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHccc--CCeEEEEEeCCHHHHHHHHHcCCCceEEECchHH
Confidence 33443332223678999999999999999999999999999975 369999999877 678
Q ss_pred HHHhCCCCcccEEEEEe-CC-eeeeecCCCC--HHHHHHHHHHHcCC
Q 010469 159 LAHEYDVQGFPTIYFFV-DG-QHKAYNGGRT--KDAIVTWIKKKIGP 201 (510)
Q Consensus 159 ~~~~~~v~~~P~~~~~~-~g-~~~~y~g~~~--~~~l~~~i~~~~~~ 201 (510)
+++.|+|.++|+++++. +| ....+.|..+ ..++.+.+.+..++
T Consensus 107 ~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~ 153 (158)
T 3hdc_A 107 VQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGH 153 (158)
T ss_dssp HHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC--
T ss_pred HHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhccc
Confidence 99999999999999995 77 4467888754 46777776665543
No 155
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.40 E-value=2.4e-13 Score=112.17 Aligned_cols=70 Identities=14% Similarity=0.250 Sum_probs=59.1
Q ss_pred eEEEe-CcchhhHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccceeEeeee
Q 010469 436 VKIVV-GNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKVIFDVN 509 (510)
Q Consensus 436 ~~~l~-~~~f~~~v~~-~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~~~~~v~ 509 (510)
+..+. ..+|++.+.+ .+++|||.|||+||++|+.|.|.++++|+.+.+ ++.|+++|++++...+.+ |+|+
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~--~v~f~kVDVDe~~e~a~~--y~V~ 94 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN--FCVIYLVDITEVPDFNTM--YELY 94 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCTTTTT--TTCC
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC--CcEEEEEECCCCHHHHHH--cCCC
Confidence 44554 4689998874 678999999999999999999999999999976 799999999988877666 5553
No 156
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.40 E-value=8e-13 Score=111.70 Aligned_cols=88 Identities=19% Similarity=0.396 Sum_probs=72.7
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHH-hhcCCCeEEEEEeCcc-------------------------cHHHHHh
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATEL-KSANESVVLAKVDATE-------------------------ENELAHE 162 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~-~~~~~~v~~~~vd~~~-------------------------~~~~~~~ 162 (510)
++++++|.||++||++|+.+.|.+.++++++ ++ .++.++.|+++. +..+++.
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKN--KNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQ 109 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTC--TTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC--CCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHh
Confidence 6789999999999999999999999999998 55 358888888776 3478999
Q ss_pred CCCCcccEEEEEe-CCeeeeecCCCCHHHHHHHHHHHcC
Q 010469 163 YDVQGFPTIYFFV-DGQHKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 163 ~~v~~~P~~~~~~-~g~~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
|+|.++|++++++ +|+...... +.+.+.++|.+.+.
T Consensus 110 ~~v~~~P~~~lid~~G~i~~~~~--~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 110 YAILTLPTNILLSPTGKILARDI--QGEALTGKLKELLK 146 (148)
T ss_dssp TTCCSSSEEEEECTTSBEEEESC--CHHHHHHHHHHHC-
T ss_pred cCCCCcCEEEEECCCCeEEEecC--CHHHHHHHHHHHHc
Confidence 9999999999995 775432222 78889999887763
No 157
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.39 E-value=1.1e-12 Score=113.23 Aligned_cols=86 Identities=16% Similarity=0.309 Sum_probs=74.1
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc------------------ccH-------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT------------------EEN------------- 157 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~------------------~~~------------- 157 (510)
.+++++|.||++||++|+.+.|.+.+++++++ ++.++.|+++ +.+
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~----~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR----EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDP 111 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT----TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCT
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC----CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCC
Confidence 67899999999999999999999999999886 4899999887 342
Q ss_pred ---------HHHHhCCCCcccEEEEEe-CCeeeeecCCC-CHHHHHHHHHHHc
Q 010469 158 ---------ELAHEYDVQGFPTIYFFV-DGQHKAYNGGR-TKDAIVTWIKKKI 199 (510)
Q Consensus 158 ---------~~~~~~~v~~~P~~~~~~-~g~~~~y~g~~-~~~~l~~~i~~~~ 199 (510)
.+++.|+|.++|++++++ +|+... .|.. +.+.+.++|.+.+
T Consensus 112 ~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~-~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 112 SWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY-AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp TSEEEECCSHHHHHTTCCSSSEEEEEETTCCEEE-EEESCCHHHHHHHHHHC-
T ss_pred CeeEEeChHHHHHHhCCCCceEEEEEcCCCcEEE-eCCCCCHHHHHHHHHHHh
Confidence 788999999999999995 675555 8888 8999999998765
No 158
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.39 E-value=7.8e-13 Score=103.20 Aligned_cols=77 Identities=12% Similarity=0.205 Sum_probs=68.9
Q ss_pred eEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEEeCCeeeeecCCCCHHHH
Q 010469 112 FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAI 191 (510)
Q Consensus 112 ~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~~g~~~~y~g~~~~~~l 191 (510)
..++.||++||++|+...|.|+++++++ ++.+..||.++++++..+|+++ +|++++|.+|+.. ..|..+.+.|
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~-----~i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v-~~g~~~~~~L 102 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKS-----WFELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL-CHYFLDSDVI 102 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHS-----CCCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE-ECSSCCCHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhc-----CCeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE-EecCCCHHHH
Confidence 5699999999999999999999998775 3888999999999999999997 9999999999665 4588899999
Q ss_pred HHHH
Q 010469 192 VTWI 195 (510)
Q Consensus 192 ~~~i 195 (510)
.+||
T Consensus 103 ~~~L 106 (107)
T 2fgx_A 103 GAYL 106 (107)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9887
No 159
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.37 E-value=1.5e-12 Score=112.77 Aligned_cols=95 Identities=16% Similarity=0.286 Sum_probs=74.7
Q ss_pred ChhcHHHH-HhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEe-----------------------Cc
Q 010469 99 KERNFSDV-IENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVD-----------------------AT 154 (510)
Q Consensus 99 ~~~~~~~~-~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd-----------------------~~ 154 (510)
+++.+... +.++++++|+||++||++|+.+.|.|.+++++ ++.++.|+ ++
T Consensus 39 ~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~------~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d 112 (168)
T 2b1k_A 39 PGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ------GIRVVGMNYKDDRQKAISWLKELGNPYALSLFD 112 (168)
T ss_dssp TTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT------TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEE
T ss_pred CCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC------CCEEEEEECCCChHHHHHHHHHcCCCCceeeEC
Confidence 44444332 24789999999999999999999999998864 36666666 34
Q ss_pred ccHHHHHhCCCCcccEEEEEe-CCe-eeeecCCCCHHHHHHHHHHHc
Q 010469 155 EENELAHEYDVQGFPTIYFFV-DGQ-HKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 155 ~~~~~~~~~~v~~~P~~~~~~-~g~-~~~y~g~~~~~~l~~~i~~~~ 199 (510)
.+..+++.|+|.++|+++++. +|+ ...+.|..+.+.+.++|.+.+
T Consensus 113 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 113 GDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp TTCHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHH
T ss_pred cchHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 456789999999999888885 784 457889999999999888765
No 160
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.36 E-value=1.6e-12 Score=109.35 Aligned_cols=86 Identities=19% Similarity=0.245 Sum_probs=67.5
Q ss_pred cEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc------------------
Q 010469 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE------------------ 156 (510)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~------------------ 156 (510)
+..++++.+...-..+++++|+||++||++|+.+.|.|.++++++++. .++.++.|+++..
T Consensus 13 l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 91 (144)
T 1i5g_A 13 VLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK-KNFEVMLISWDESAEDFKDYYAKMPWLALPF 91 (144)
T ss_dssp EEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSSHHHHHHHHTTCSSEECCT
T ss_pred EEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCCHHHHHHHHHhCCcccccc
Confidence 444455544433336789999999999999999999999999999741 2688888888753
Q ss_pred ------HHHHHhCCCCcccEEEEEe--CCeeee
Q 010469 157 ------NELAHEYDVQGFPTIYFFV--DGQHKA 181 (510)
Q Consensus 157 ------~~~~~~~~v~~~P~~~~~~--~g~~~~ 181 (510)
..+++.|+|.++|++++++ +|+...
T Consensus 92 ~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~ 124 (144)
T 1i5g_A 92 EDRKGMEFLTTGFDVKSIPTLVGVEADSGNIIT 124 (144)
T ss_dssp TCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEE
T ss_pred CchHHHHHHHHHcCCCCCCEEEEEECCCCcEEe
Confidence 4788999999999999997 675543
No 161
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.36 E-value=2.4e-12 Score=112.23 Aligned_cols=91 Identities=19% Similarity=0.360 Sum_probs=73.2
Q ss_pred HHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeC-----------------------cccHHH
Q 010469 103 FSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA-----------------------TEENEL 159 (510)
Q Consensus 103 ~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~-----------------------~~~~~~ 159 (510)
+......+++++|+||++||++|+.+.|.|.+++++ ++.++.|++ +.+..+
T Consensus 51 ~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~------~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 124 (176)
T 3kh7_A 51 LTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ------GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTL 124 (176)
T ss_dssp EEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT------TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHH
T ss_pred ecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC------CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchH
Confidence 333334578999999999999999999999998875 367777764 334568
Q ss_pred HHhCCCCcccEEEEEe-CC-eeeeecCCCCHHHHHHHHHHHc
Q 010469 160 AHEYDVQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 160 ~~~~~v~~~P~~~~~~-~g-~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
++.|+|.++|+++++. +| ....+.|..+.+.+.++|.+.+
T Consensus 125 ~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 125 GLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp HHHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHH
T ss_pred HHHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 8899999999999995 77 4468889999999998888766
No 162
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.36 E-value=3.1e-12 Score=108.91 Aligned_cols=90 Identities=18% Similarity=0.465 Sum_probs=74.6
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc-----------------------HHHHHhCCC
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-----------------------NELAHEYDV 165 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-----------------------~~~~~~~~v 165 (510)
.+++++|.||++||++|+.+.|.+.++++++.+ .++.++.|+++.+ ..+++.|++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 104 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAG--KPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGT 104 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--SSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc--CCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCC
Confidence 678999999999999999999999999999976 3588888888765 348889999
Q ss_pred CcccEEEEEe-CCe-eeeecCCC--CHHHHHHHHHHHcC
Q 010469 166 QGFPTIYFFV-DGQ-HKAYNGGR--TKDAIVTWIKKKIG 200 (510)
Q Consensus 166 ~~~P~~~~~~-~g~-~~~y~g~~--~~~~l~~~i~~~~~ 200 (510)
.++|+++++. +|+ ...+.|.. +.+.+.++|.+...
T Consensus 105 ~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 105 TGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp CSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred CCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 9999998885 774 45778875 66799999887654
No 163
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.35 E-value=1.7e-12 Score=110.76 Aligned_cols=86 Identities=20% Similarity=0.400 Sum_probs=71.5
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc-----------------------ccHHHHHhCCC
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-----------------------EENELAHEYDV 165 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-----------------------~~~~~~~~~~v 165 (510)
.+++++|+||++||++|+.+.|.|.+++++ + ++.++.|+++ ....+++.|++
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~---~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 115 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--K---RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGV 115 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--T---TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--C---CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCc
Confidence 578999999999999999999999998765 2 5777777753 34578889999
Q ss_pred CcccEEEEEe-CCe-eeeecCCCCHHHHHHHHHHHc
Q 010469 166 QGFPTIYFFV-DGQ-HKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 166 ~~~P~~~~~~-~g~-~~~y~g~~~~~~l~~~i~~~~ 199 (510)
.++|+++++. +|+ ...+.|..+.+.+.++|.+.+
T Consensus 116 ~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 116 YGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp CSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHH
T ss_pred CccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 9999888884 774 457889999999999888765
No 164
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.34 E-value=1.1e-12 Score=98.87 Aligned_cols=74 Identities=14% Similarity=0.218 Sum_probs=63.5
Q ss_pred EEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEEeCCeeeeecCCCCHHHHHH
Q 010469 114 MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAIVT 193 (510)
Q Consensus 114 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~~~g~~~~y~g~~~~~~l~~ 193 (510)
++.||++||++|+...|.|++++.+ .+..||.+++++++.+|+++ +|++++ .+|+... |..+.+.|.+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~--------~~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~--g~~~~~~L~~ 70 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAG--------AFFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD--WPFDAPRLRA 70 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCC--------CEEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE--SCCCHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHh--------heEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe--CCCCHHHHHH
Confidence 7899999999999999999876432 16789999999999999998 999998 8886553 8899999999
Q ss_pred HHHHHc
Q 010469 194 WIKKKI 199 (510)
Q Consensus 194 ~i~~~~ 199 (510)
|+.+.+
T Consensus 71 ~l~~~~ 76 (87)
T 1ttz_A 71 WLDAAP 76 (87)
T ss_dssp HHHTCC
T ss_pred HHHHHH
Confidence 997655
No 165
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.34 E-value=6.8e-12 Score=106.31 Aligned_cols=87 Identities=17% Similarity=0.333 Sum_probs=71.8
Q ss_pred CCCeEEEEEECCCChH--HhhhhHHHHHHHHHH-hhcCCCeEEEEEeCcccH-------------------------HHH
Q 010469 109 NNKFVMVEFYAPWCGH--CQALAPEYAAAATEL-KSANESVVLAKVDATEEN-------------------------ELA 160 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~--C~~~~p~~~~~~~~~-~~~~~~v~~~~vd~~~~~-------------------------~~~ 160 (510)
.+++++|+||++||++ |+.+.|.+.++++++ ++ .++.++.|+++..+ .++
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 109 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKN--KYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVA 109 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTC--SSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccC--CCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHH
Confidence 5789999999999999 999999999999999 55 35899999887654 788
Q ss_pred HhCCCCcccEEEEEe-CCeeeeecCCCCHHHHHHHHHHHc
Q 010469 161 HEYDVQGFPTIYFFV-DGQHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 161 ~~~~v~~~P~~~~~~-~g~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
+.|+|.++|++++++ +|+..... .+.+.+.+.|.+.+
T Consensus 110 ~~~~v~~~P~~~lid~~G~i~~~~--~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 110 KQYSIYKIPANILLSSDGKILAKN--LRGEELKKKIENIV 147 (150)
T ss_dssp HHTTCCSSSEEEEECTTSBEEEES--CCHHHHHHHHHHHH
T ss_pred HHcCCCccCeEEEECCCCEEEEcc--CCHHHHHHHHHHHH
Confidence 899999999999995 77543222 27788888887664
No 166
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.34 E-value=4.4e-12 Score=122.03 Aligned_cols=89 Identities=19% Similarity=0.325 Sum_probs=77.4
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc---------------------------cHHHHH
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE---------------------------ENELAH 161 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~---------------------------~~~~~~ 161 (510)
.++++||+||++||++|+.+.|.|.++++++++ .++.++.|+++. +..+++
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~--~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~ 158 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKD--SGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWT 158 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG--GTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhc--CCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHH
Confidence 578999999999999999999999999999987 358999998752 347889
Q ss_pred hCCCCcccEEEEEe-CC-eeeeecCCCCHHHHHHHHHHHc
Q 010469 162 EYDVQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 162 ~~~v~~~P~~~~~~-~g-~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
.|+|.++|+++++. +| ....+.|..+.+.+.++|++.+
T Consensus 159 ~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 159 NYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp HTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 99999999999994 77 4467889999999999998876
No 167
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.34 E-value=2.7e-12 Score=108.29 Aligned_cols=71 Identities=20% Similarity=0.403 Sum_probs=60.7
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc------------------------HHHHHhCC
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE------------------------NELAHEYD 164 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~------------------------~~~~~~~~ 164 (510)
.+++++|+||++||++|+.+.|.|.++++++++. .++.++.|+++.. ..++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES-KNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFN 105 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTT
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhc-CCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhC
Confidence 6789999999999999999999999999999731 2688888887753 47889999
Q ss_pred CCcccEEEEEe--CCeee
Q 010469 165 VQGFPTIYFFV--DGQHK 180 (510)
Q Consensus 165 v~~~P~~~~~~--~g~~~ 180 (510)
|.++|++++++ +|+..
T Consensus 106 v~~~Pt~~lid~~~G~i~ 123 (146)
T 1o8x_A 106 VESIPTLIGVDADSGDVV 123 (146)
T ss_dssp CCSSSEEEEEETTTCCEE
T ss_pred CCCCCEEEEEECCCCeEE
Confidence 99999999998 77544
No 168
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.34 E-value=3.2e-12 Score=110.18 Aligned_cols=72 Identities=24% Similarity=0.474 Sum_probs=61.8
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc------------------------HHHHHhCC
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE------------------------NELAHEYD 164 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~------------------------~~~~~~~~ 164 (510)
+++++||+||++||++|+.+.|.|.++++++++. .++.++.|+++.. ..+++.|+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 125 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDS-KNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYS 125 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccC-CCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcC
Confidence 5789999999999999999999999999999752 2688888887765 67899999
Q ss_pred CCcccEEEEEe-C-Ceeee
Q 010469 165 VQGFPTIYFFV-D-GQHKA 181 (510)
Q Consensus 165 v~~~P~~~~~~-~-g~~~~ 181 (510)
|.++|++++++ + |++..
T Consensus 126 v~~~Pt~~lid~~~G~iv~ 144 (165)
T 3s9f_A 126 VESIPTLIGLNADTGDTVT 144 (165)
T ss_dssp CCSSSEEEEEETTTCCEEE
T ss_pred CCCCCEEEEEeCCCCEEEe
Confidence 99999999998 4 75543
No 169
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.32 E-value=1.5e-12 Score=107.06 Aligned_cols=71 Identities=27% Similarity=0.430 Sum_probs=61.2
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC---CCcEEEEEEeCCCCcCccce
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG---VDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~---~~~~~~~~id~~~n~~~~~~ 503 (510)
...+..+++++|++.+.+++++++|+|||+||++|+.+.|.|.++++.+.. ..++.|+++|++.+.....+
T Consensus 14 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~ 87 (127)
T 3h79_A 14 PSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIER 87 (127)
T ss_dssp CCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHH
T ss_pred CCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHh
Confidence 567899999999999987789999999999999999999999999987642 24799999999987654443
No 170
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.32 E-value=9.9e-12 Score=109.48 Aligned_cols=92 Identities=17% Similarity=0.393 Sum_probs=74.9
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc-----HHHHHhCCCC-----------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-----NELAHEYDVQ----------------- 166 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-----~~~~~~~~v~----------------- 166 (510)
.+++++|+||++||++|+.+.|.+.++++++++ .++.++.|+++.. ..+++++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~--~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 136 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSG--PNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLK 136 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCB--TTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHH
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhcc--CCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhc
Confidence 678999999999999999999999999999975 3688888888754 4567777764
Q ss_pred ------cccEEEEEe-CCe-eeeecCCCC--HHHHHHHHHHHcCCC
Q 010469 167 ------GFPTIYFFV-DGQ-HKAYNGGRT--KDAIVTWIKKKIGPG 202 (510)
Q Consensus 167 ------~~P~~~~~~-~g~-~~~y~g~~~--~~~l~~~i~~~~~~~ 202 (510)
++|++++++ +|+ ...+.|..+ .+.+.++|.+.+..+
T Consensus 137 ~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~~ 182 (186)
T 1jfu_A 137 AIGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGKA 182 (186)
T ss_dssp TTTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC--
T ss_pred cccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhccc
Confidence 899999995 784 457888765 688999999887543
No 171
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.31 E-value=3.3e-12 Score=107.44 Aligned_cols=73 Identities=23% Similarity=0.414 Sum_probs=61.4
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc------------------------HHHHHhCC
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE------------------------NELAHEYD 164 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~------------------------~~~~~~~~ 164 (510)
.+++++|+||++||++|+.+.|.|.++++++++. .++.++.|+++.. ..++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA-KNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFG 105 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHT
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcC
Confidence 5789999999999999999999999999999731 2688888887753 46889999
Q ss_pred CCcccEEEEEe--CCeeeee
Q 010469 165 VQGFPTIYFFV--DGQHKAY 182 (510)
Q Consensus 165 v~~~P~~~~~~--~g~~~~y 182 (510)
|.++|++++++ +|+....
T Consensus 106 v~~~Pt~~lid~~~G~i~~~ 125 (144)
T 1o73_A 106 VESIPTLITINADTGAIIGT 125 (144)
T ss_dssp CCSSSEEEEEETTTCCEEES
T ss_pred CCCCCEEEEEECCCCeEEec
Confidence 99999999998 6755443
No 172
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.29 E-value=5.8e-12 Score=102.43 Aligned_cols=72 Identities=50% Similarity=0.969 Sum_probs=62.8
Q ss_pred CCCCCCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC---CCcEEEEEEeCCCCcCc
Q 010469 429 PETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG---VDSIVIAKMDGTTNEHH 500 (510)
Q Consensus 429 p~~~~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~---~~~~~~~~id~~~n~~~ 500 (510)
|+...+.+..+++++|++.+...+++++|+||++||++|+.+.|.|.++++.+++ ..++.|+.+|++.++..
T Consensus 2 p~~~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~ 76 (121)
T 2djj_A 2 PLGSEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVP 76 (121)
T ss_dssp CCCCSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCS
T ss_pred CccCCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccccc
Confidence 3445678899999999998877789999999999999999999999999999875 24799999999988754
No 173
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.29 E-value=1e-11 Score=110.33 Aligned_cols=91 Identities=18% Similarity=0.268 Sum_probs=75.3
Q ss_pred CCC-eEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc-----------------------------ccHH
Q 010469 109 NNK-FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-----------------------------EENE 158 (510)
Q Consensus 109 ~~~-~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-----------------------------~~~~ 158 (510)
.++ +++|+||++||++|+.+.|.+.++++++++. ++.++.|+++ .+..
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~ 121 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPK--GVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQE 121 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG--TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC--CcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchH
Confidence 455 6999999999999999999999999999873 5888888873 3457
Q ss_pred HHHhCCCCcccEEEEEe-CCee-ee---------ecCCCCHHHHHHHHHHHcCC
Q 010469 159 LAHEYDVQGFPTIYFFV-DGQH-KA---------YNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 159 ~~~~~~v~~~P~~~~~~-~g~~-~~---------y~g~~~~~~l~~~i~~~~~~ 201 (510)
+++.|+|.++|++++++ +|+. .. +.|..+.+.+.+.|.+.+..
T Consensus 122 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 122 VAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEG 175 (196)
T ss_dssp HHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHT
T ss_pred HHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcC
Confidence 88999999999999996 7744 34 35777889999999888743
No 174
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.28 E-value=5.3e-12 Score=104.60 Aligned_cols=75 Identities=52% Similarity=1.023 Sum_probs=65.2
Q ss_pred CCCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccceeEeee
Q 010469 432 NDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKVIFDV 508 (510)
Q Consensus 432 ~~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~~~~~v 508 (510)
..+.+..+++++|+..+.+.+++++|+||++||++|+.+.|.|.++++.+....++.|+.+|++.++....+ |+|
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~--~~v 79 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQ--YKV 79 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSS--CCC
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhh--cCC
Confidence 367889999999999887778899999999999999999999999999997544799999999988776654 454
No 175
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.28 E-value=8.9e-12 Score=104.65 Aligned_cols=84 Identities=15% Similarity=0.308 Sum_probs=66.5
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccH--------------------------HHHHh
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEEN--------------------------ELAHE 162 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~--------------------------~~~~~ 162 (510)
.+++++|+||++||++|+.++|.+.++++++++. ++.++.|+++.++ .+++.
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 108 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD--KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKK 108 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT--TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC--CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHH
Confidence 5789999999999999999999999999998762 5888888876432 46788
Q ss_pred CCCCcccEEEEEe-CCeeeeecCCCCHHHHHHHHH
Q 010469 163 YDVQGFPTIYFFV-DGQHKAYNGGRTKDAIVTWIK 196 (510)
Q Consensus 163 ~~v~~~P~~~~~~-~g~~~~y~g~~~~~~l~~~i~ 196 (510)
|+|.++|++++++ +|+.... + ...+.+.+.++
T Consensus 109 ~~v~~~P~~~lid~~G~i~~~-~-~~~~~l~~~l~ 141 (143)
T 4fo5_A 109 YDLRKGFKNFLINDEGVIIAA-N-VTPEKLTEILK 141 (143)
T ss_dssp TTGGGCCCEEEECTTSBEEEE-S-CCHHHHHHHHT
T ss_pred cCCCCCCcEEEECCCCEEEEc-c-CCHHHHHHHHH
Confidence 9999999999997 7754322 1 24566766664
No 176
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.26 E-value=1.8e-11 Score=108.02 Aligned_cols=90 Identities=17% Similarity=0.255 Sum_probs=73.3
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc-----------------------------ccHHH
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-----------------------------EENEL 159 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-----------------------------~~~~~ 159 (510)
.+++++|+||++||++|+.++|.+.++++++++ .+.++.|+++ .+..+
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~---~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~ 108 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRG---KVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEV 108 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTT---TEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhc---CeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchH
Confidence 578999999999999999999999999999987 3888999883 34578
Q ss_pred HHhCCCCcccEEEEEe-CCeeeee---------cCCCCHHHHHHHHHHHcCC
Q 010469 160 AHEYDVQGFPTIYFFV-DGQHKAY---------NGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 160 ~~~~~v~~~P~~~~~~-~g~~~~y---------~g~~~~~~l~~~i~~~~~~ 201 (510)
++.|++.++|++++++ +|+.... .|..+.+.+.+.|.+.+..
T Consensus 109 ~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 109 AKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp HHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTT
T ss_pred HHHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcC
Confidence 8999999999999995 6744322 2333678899999888754
No 177
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.91 E-value=4.7e-13 Score=112.45 Aligned_cols=92 Identities=21% Similarity=0.388 Sum_probs=68.0
Q ss_pred EEeChhcHHHHH-hCCC-eEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc-----------------
Q 010469 96 VVLKERNFSDVI-ENNK-FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE----------------- 156 (510)
Q Consensus 96 ~~l~~~~~~~~~-~~~~-~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~----------------- 156 (510)
..++++.+...- ..++ +++|+||++||++|+.+.|.|.+++++++..+.++.++.|++++.
T Consensus 10 ~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~ 89 (143)
T 2lus_A 10 VKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLA 89 (143)
Confidence 334444444221 2466 999999999999999999999999999854333577787877654
Q ss_pred --------HHHHHhCCCCcccEEEEEe-CCeeeeecCCCC
Q 010469 157 --------NELAHEYDVQGFPTIYFFV-DGQHKAYNGGRT 187 (510)
Q Consensus 157 --------~~~~~~~~v~~~P~~~~~~-~g~~~~y~g~~~ 187 (510)
..+++.|+|.++|++++++ +|+.....|...
T Consensus 90 ~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~ 129 (143)
T 2lus_A 90 IPYRSGPASNVTAKYGITGIPALVIVKKDGTLISMNGRGE 129 (143)
Confidence 3688899999999999997 786554454433
No 178
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.25 E-value=3.1e-12 Score=100.86 Aligned_cols=64 Identities=23% Similarity=0.552 Sum_probs=53.2
Q ss_pred eCcchhhHhhcc-CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccceeEeee
Q 010469 440 VGNNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKVIFDV 508 (510)
Q Consensus 440 ~~~~f~~~v~~~-~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~~~~~v 508 (510)
+.++|++.+.+. +++|+|.|||+||++|+.+.|.+.++++.+. ++.|+++|++.+.....+ |||
T Consensus 7 ~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~d~~~~l~~~--~~V 71 (105)
T 3zzx_A 7 DQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS---DVVFLKVDVDECEDIAQD--NQI 71 (105)
T ss_dssp SHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TEEEEEEETTTCHHHHHH--TTC
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC---CeEEEEEecccCHHHHHH--cCC
Confidence 346899888754 5799999999999999999999999999886 489999999987665544 454
No 179
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.25 E-value=2.4e-12 Score=104.67 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=61.8
Q ss_pred CceEEEeCcchhhHhhccCCcEEEEEeCCCC--hhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccceeEeeee
Q 010469 434 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWC--GHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKVIFDVN 509 (510)
Q Consensus 434 ~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c--~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~~~~~v~ 509 (510)
.....++.++|++.+..++++|||+|||+|| ++|+.+.|++.++++.+.+ ++.|+++|++.|...+.+ |||+
T Consensus 15 ~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~--~v~~~KVdvDe~~~la~~--ygV~ 88 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG--RLVAAEVAAEAERGLMAR--FGVA 88 (137)
T ss_dssp --CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT--TEEEEEECGGGHHHHHHH--HTCC
T ss_pred cCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC--CcEEEEEECCCCHHHHHH--cCCc
Confidence 4456899999999997766799999999999 9999999999999999976 899999999988766665 6664
No 180
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.24 E-value=5.5e-12 Score=101.30 Aligned_cols=61 Identities=16% Similarity=0.281 Sum_probs=54.4
Q ss_pred CceEEEeCcchhhHhhccCC--cEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCC
Q 010469 434 GDVKIVVGNNFDEIVLDESK--DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN 497 (510)
Q Consensus 434 ~~~~~l~~~~f~~~v~~~~~--~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n 497 (510)
|.+.+++.++|.+.+.+.++ +|+|+|||+||++|+.|.|.++++|+.+. ++.|+++|++.+
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~---~v~f~kvd~d~~ 65 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP---ETKFVKAIVNSC 65 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT---TSEEEEEEGGGT
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC---CCEEEEEEhHHh
Confidence 56788899999998876654 89999999999999999999999999885 499999999875
No 181
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.24 E-value=7.2e-10 Score=102.44 Aligned_cols=197 Identities=19% Similarity=0.287 Sum_probs=142.8
Q ss_pred CCcEEeC-hhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEE
Q 010469 93 KDVVVLK-ERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTI 171 (510)
Q Consensus 93 ~~v~~l~-~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~ 171 (510)
+.+..|+ .+.++.++..+++++|-|+++|| ....+.|.++|..+++ .+.|+.+. +.++++++++.+ |++
T Consensus 6 P~v~~l~s~~~~~~~l~~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~---~~~F~~~~---~~~v~~~~~~~~-p~i 75 (252)
T 2h8l_A 6 PASVPLRTEEEFKKFISDKDASIVGFFDDSF---SEAHSEFLKAASNLRD---NYRFAHTN---VESLVNEYDDNG-EGI 75 (252)
T ss_dssp CCEEECCSHHHHHHHHTSSSCEEEEEESCTT---SHHHHHHHHHHHHTTT---TSCEEEEC---CHHHHHHHCSSS-EEE
T ss_pred CCceeecCHHHHHHHhhcCCeEEEEEECCCC---ChHHHHHHHHHHhccc---CcEEEEEC---hHHHHHHhCCCC-CcE
Confidence 4577784 56778888888899999999985 4467899999999977 68888774 477999999997 999
Q ss_pred EEEeCC--------eeeee-cCCCCHHHHHHHHHHHcCCCcccccchhHHHHhccCCCeEEEEEec-CCCCc------ch
Q 010469 172 YFFVDG--------QHKAY-NGGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLN-SLVGS------ES 235 (510)
Q Consensus 172 ~~~~~g--------~~~~y-~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~~~-~~~~~------~~ 235 (510)
++|+++ ....| .|..+.+.|.+||....-|.+.+++. +....+ .+.+. +++|+. ..... -.
T Consensus 76 ~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~-~n~~~~-~~~~~-~v~~~~~~~~~~~~~~~~~~ 152 (252)
T 2h8l_A 76 ILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTE-DNKDLI-QGKDL-LIAYYDVDYEKNAKGSNYWR 152 (252)
T ss_dssp EEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECT-TTHHHH-SSSSE-EEEEECCBTTTBHHHHHHHH
T ss_pred EEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeeccc-ccHhhh-cCCCe-EEEEeecchhhcchhHHHHH
Confidence 999852 45688 99999999999999999999999877 445555 33344 444443 22211 12
Q ss_pred HHHHHhc-cccCc---eeEEEcCCh---hHHHhhCCCC-CCCCCeEEEeccCCCceeeccCCCCCHHH--HHHHHHhcC
Q 010469 236 EVLADAS-RLEDD---VNFYQTTNP---DVAKIFHLDS-KVNRPALVMVKKETEKISYFADGKFDKST--IADFVFSNK 304 (510)
Q Consensus 236 ~~~~~~~-~~~~~---~~f~~~~~~---~l~~~~~~~~-~~~~p~l~~~~~~~~~~~~y~~g~~~~~~--i~~fi~~~~ 304 (510)
..+..+| +++++ +.|+.+... .+.+.||+.. ....|.++++...+ ....+ .++++.+. |.+|+....
T Consensus 153 ~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~-~ky~~-~~~~t~~~~~i~~F~~~~~ 229 (252)
T 2h8l_A 153 NRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKG-EKFVM-QEEFSRDGKALERFLQDYF 229 (252)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTS-CEEEC-CSCCCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcC-cEecC-CcccCcchHHHHHHHHHHH
Confidence 3344455 56655 889876543 4677889931 13579999886533 34446 67888888 999998744
No 182
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.23 E-value=4.1e-11 Score=103.86 Aligned_cols=92 Identities=18% Similarity=0.345 Sum_probs=75.4
Q ss_pred CCCeEEEEEECCCChH-HhhhhHHHHHHHHHHhhc--CCCeEEEEEeCccc----------------------------H
Q 010469 109 NNKFVMVEFYAPWCGH-CQALAPEYAAAATELKSA--NESVVLAKVDATEE----------------------------N 157 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~-C~~~~p~~~~~~~~~~~~--~~~v~~~~vd~~~~----------------------------~ 157 (510)
.+++++|+||++||++ |+.+.|.+.+++++++.. ..++.++.|+++.+ .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 5789999999999998 999999999999999742 13688888887631 2
Q ss_pred HHHHhCCCCccc---------------EEEEEe-CC-eeeeecCCCCHHHHHHHHHHHcC
Q 010469 158 ELAHEYDVQGFP---------------TIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 158 ~~~~~~~v~~~P---------------~~~~~~-~g-~~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
.+++.|+|...| +++++. +| ....+.|..+.+.+.+.|.+.+.
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 578889999888 888885 77 44578899999999999987763
No 183
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.23 E-value=3e-11 Score=109.14 Aligned_cols=103 Identities=12% Similarity=0.224 Sum_probs=77.8
Q ss_pred EEeChhcHHHHHhCCC-eEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc--------------------
Q 010469 96 VVLKERNFSDVIENNK-FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-------------------- 154 (510)
Q Consensus 96 ~~l~~~~~~~~~~~~~-~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-------------------- 154 (510)
..++++.+...--.++ ++||+||++||++|+.+.|.|.++++++++ .++.++.|+++
T Consensus 44 ~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~--~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~ 121 (218)
T 3u5r_E 44 PDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAG--QGLAVVAINSNDAQAFPEETLERVGAEVKAY 121 (218)
T ss_dssp ECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTT--TTEEEEEEECSCTTTCGGGSHHHHHHHHHHH
T ss_pred ECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHh--CCcEEEEEECCcccccccCCHHHHHHHHHHh
Confidence 3344444332222456 599999999999999999999999999987 34889999883
Q ss_pred ---------ccHHHHHhCCCCcccEEEEEe-CCeeeeecC-----------CCCHHHHHHHHHHHcCC
Q 010469 155 ---------EENELAHEYDVQGFPTIYFFV-DGQHKAYNG-----------GRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 155 ---------~~~~~~~~~~v~~~P~~~~~~-~g~~~~y~g-----------~~~~~~l~~~i~~~~~~ 201 (510)
....+++.|+|.++|++++++ +|++ .|.| ..+.+.|.+.|.+.+..
T Consensus 122 ~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i-~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~ 188 (218)
T 3u5r_E 122 GYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRL-VYHGQFDDARPGNGKDVTGADLRAAVDAVLKG 188 (218)
T ss_dssp TCCSCEEECTTCHHHHHHTCCEESEEEEECTTCBE-EEEECSSSCCTTSCCCCCCHHHHHHHHHHHTT
T ss_pred CCCccEEECCccHHHHHcCCCCCCeEEEECCCCcE-EEeccccccccccccccCHHHHHHHHHHHHcC
Confidence 345788999999999999995 6644 3443 34568888888887754
No 184
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.23 E-value=1.9e-11 Score=106.10 Aligned_cols=89 Identities=13% Similarity=0.212 Sum_probs=69.7
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc-------cc----HHHH-----------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-------EE----NELA----------------- 160 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-------~~----~~~~----------------- 160 (510)
.+++++|+|||+||++|+ ++|.|.++++++++. ++.++.|+++ +. .+++
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~ 107 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE--GFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVN 107 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG--TEEEEEEEECSCC------------------CCCSCBBCCCBSS
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC--CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCC
Confidence 578999999999999999 999999999999873 5888888763 11 1122
Q ss_pred -------------HhCCCCccc------EEEEEe-CC-eeeeecCCCCHHHHHHHHHHHcC
Q 010469 161 -------------HEYDVQGFP------TIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 161 -------------~~~~v~~~P------~~~~~~-~g-~~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
+.+++.++| +++++. +| ....+.|..+.+.+.+.|.+.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 108 GGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp STTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred CccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 246788999 888884 78 44678898899999999988764
No 185
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.22 E-value=1.8e-11 Score=97.17 Aligned_cols=68 Identities=25% Similarity=0.606 Sum_probs=59.9
Q ss_pred CceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 434 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 434 ~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
+.+..++.++|++.+...+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+.....+
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~ 69 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPK 69 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCTTHHHH
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHH
Confidence 46788999999988877789999999999999999999999999999876 699999999987654443
No 186
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.21 E-value=6.7e-11 Score=101.71 Aligned_cols=92 Identities=17% Similarity=0.299 Sum_probs=75.0
Q ss_pred CCCeEEEEEECCCChH-HhhhhHHHHHHHHHHhhc--CCCeEEEEEeCccc----------------------------H
Q 010469 109 NNKFVMVEFYAPWCGH-CQALAPEYAAAATELKSA--NESVVLAKVDATEE----------------------------N 157 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~-C~~~~p~~~~~~~~~~~~--~~~v~~~~vd~~~~----------------------------~ 157 (510)
.+++++|+||++||++ |+.+.|.+.++++++++. ..++.++.|+++.. .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 5789999999999998 999999999999999752 12688888877542 1
Q ss_pred HHHHhCCCCccc---------------EEEEEe-CC-eeeeecCCCCHHHHHHHHHHHcC
Q 010469 158 ELAHEYDVQGFP---------------TIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 158 ~~~~~~~v~~~P---------------~~~~~~-~g-~~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
.+++.|+|...| +++++. +| ....+.|..+.+.+.+.|.+.+.
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 477889999999 788885 77 44578898999999999887763
No 187
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.20 E-value=4.9e-11 Score=105.03 Aligned_cols=104 Identities=13% Similarity=0.203 Sum_probs=74.9
Q ss_pred EEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc--------cHHHH---H-h-
Q 010469 96 VVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE--------ENELA---H-E- 162 (510)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~--------~~~~~---~-~- 162 (510)
..++++.+...-.+++++||+||++||++|+.++|.|.++++++++. ++.++.|+++. ...+. + +
T Consensus 32 ~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~ 109 (187)
T 3dwv_A 32 LDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ--GFTVLAFPSNQFGGQEPGNEEEIKEFVCTKF 109 (187)
T ss_dssp BBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG--TCEEEEEEBCCCSSCSSSBTTHHHHSCCBCC
T ss_pred EcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC--CeEEEEEECcccCCCCCCCHHHHHHHHHhcc
Confidence 33444444332236799999999999999999999999999999884 47888887651 11111 1 1
Q ss_pred -------------------------------CCCCccc---EEEEEe-CC-eeeeecCCCCHHHHHHHHHHHcCC
Q 010469 163 -------------------------------YDVQGFP---TIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 163 -------------------------------~~v~~~P---~~~~~~-~g-~~~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
+++..+| ++++++ +| ....+.|..+.+.+.+.|.+.+..
T Consensus 110 ~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 110 KAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLGS 184 (187)
T ss_dssp CCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC--
T ss_pred CCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHhc
Confidence 1344667 999995 78 446888999999999999988753
No 188
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.20 E-value=5.7e-11 Score=104.89 Aligned_cols=90 Identities=12% Similarity=0.153 Sum_probs=71.9
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-------c----HHHH-Hh--------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------E----NELA-HE-------------- 162 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~~~-~~-------------- 162 (510)
.++++||+||++||++|+.++|.+.++++++++. ++.++.|+++. . .+++ ++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~ 124 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ--GFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVN 124 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSS
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC--CeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccC
Confidence 6789999999999999999999999999999873 58888888762 1 1223 22
Q ss_pred ---------------CCCCccc------EEEEEe-CC-eeeeecCCCCHHHHHHHHHHHcC
Q 010469 163 ---------------YDVQGFP------TIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 163 ---------------~~v~~~P------~~~~~~-~g-~~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
+++.++| +++++. +| ....+.|..+.+.+.+.|.+.+.
T Consensus 125 ~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 125 GENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp STTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 3777888 888885 78 44678899999999999988764
No 189
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.20 E-value=2.4e-09 Score=98.75 Aligned_cols=199 Identities=13% Similarity=0.185 Sum_probs=142.6
Q ss_pred CCCcEEeCh-hcHHHHHhC-CCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCccc
Q 010469 92 DKDVVVLKE-RNFSDVIEN-NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFP 169 (510)
Q Consensus 92 ~~~v~~l~~-~~~~~~~~~-~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 169 (510)
...+..|+. +++++++.. +++++|-|+++|| ....+.|.++|+.+++ .+.|+.+. +.+++.++++.+ |
T Consensus 5 gP~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~---~~~F~~t~---~~~v~~~~~v~~-p 74 (250)
T 3ec3_A 5 SPPSKEILTLKQVQEFLKDGDDVVILGVFQGVG---DPGYLQYQDAANTLRE---DYKFHHTF---STEIAKFLKVSL-G 74 (250)
T ss_dssp CCSSEECCCHHHHHHHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTT---TCCEEEEC---CHHHHHHHTCCS-S
T ss_pred CCCceecCCHHHHHHHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhc---CcEEEEEC---cHHHHHHcCCCC-C
Confidence 345677754 788888887 8899999999986 4678899999999977 68888864 578899999987 9
Q ss_pred EEEEEeC--------Ceeeeec--CCCCHHHHHHHHHHHcCCCcccccchhHHHHhccCCCeEEEEEec-CCC-C--c--
Q 010469 170 TIYFFVD--------GQHKAYN--GGRTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLN-SLV-G--S-- 233 (510)
Q Consensus 170 ~~~~~~~--------g~~~~y~--g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~~~-~~~-~--~-- 233 (510)
++++|+. .....|. |..+.+.|.+||....-|.+.+++. +....+..+.. .+++|+. +.. . .
T Consensus 75 ~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~-~n~~~~~~~~~-l~~~~~~~d~~~~~~~~~ 152 (250)
T 3ec3_A 75 KLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKT-SNDAKRYSKRP-LVVVYYSVDFSFDYRTAT 152 (250)
T ss_dssp EEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECT-TTHHHHSCSSS-EEEEEECCCCSTTTHHHH
T ss_pred eEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCc-cchhhhhccCc-cEEEEEecccccccchhH
Confidence 9999984 3456788 5789999999999999999999876 44555554444 4444443 211 1 1
Q ss_pred --chHHHHHhc-cccCceeEEEcCCh---hHHHhhCCCCCCCCCeEEEeccCCCceeeccCCCCCHHHHHHHHHhcC
Q 010469 234 --ESEVLADAS-RLEDDVNFYQTTNP---DVAKIFHLDSKVNRPALVMVKKETEKISYFADGKFDKSTIADFVFSNK 304 (510)
Q Consensus 234 --~~~~~~~~~-~~~~~~~f~~~~~~---~l~~~~~~~~~~~~p~l~~~~~~~~~~~~y~~g~~~~~~i~~fi~~~~ 304 (510)
-...+..+| +++ ++.|+.+... ...+.||+......|.++++... +....++.++++.+.|.+|+....
T Consensus 153 ~~~~~~~~~vAk~~k-ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~-~~ky~~~~~~~t~~~i~~Fv~~~~ 227 (250)
T 3ec3_A 153 QFWRNKVLEVAKDFP-EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDES-GKKFAMEPEEFDSDALREFVMAFK 227 (250)
T ss_dssp HHHHHHHHHHHTTCT-TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTT-SCEEECCCCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhc-ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCC-CceecCCcccCCHHHHHHHHHHHH
Confidence 234456666 577 8999886543 45667888753223677776543 344445237889999999998644
No 190
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.20 E-value=4e-11 Score=98.42 Aligned_cols=69 Identities=23% Similarity=0.547 Sum_probs=61.4
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
.+.+..++.++|++.+.+.+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+.....+
T Consensus 21 ~~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~ 89 (128)
T 2o8v_B 21 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPK 89 (128)
T ss_dssp CCCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT--TEEEEEEETTTCCTTSGG
T ss_pred ccccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHH
Confidence 456889999999988877789999999999999999999999999999876 699999999988765554
No 191
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=99.19 E-value=4e-12 Score=112.34 Aligned_cols=114 Identities=14% Similarity=0.256 Sum_probs=83.4
Q ss_pred hhhhcCCCCCCCcEEEEeeCCCCCcccCC-CCCCHHHHHHHHHHhhcCcccccccCCCCCCCCCCceEEEeCcchhhHhh
Q 010469 371 VSEYFGITGEAPKVLAYTGNDDAKKHILD-GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVL 449 (510)
Q Consensus 371 l~~~~gi~~~~~P~~~i~~~~~~~~y~~~-~~~t~e~i~~Fi~~~~~Gkl~~~~kSe~~p~~~~~~~~~l~~~~f~~~v~ 449 (510)
..+.+|+.+ .|++++ +.+|... +.++.+++..|++++++ +.++++|+++|..... ...|.+|..+..
T Consensus 42 ~a~~~gi~g--vP~fvi-----ngk~~~~~~~~~~~~~~~f~~~~~~--l~~~L~s~~~p~~~~~---~~~g~~y~~l~~ 109 (197)
T 1un2_A 42 AAADVQLRG--VPAMFV-----NGKYQLNPQGMDTSNMDVFVQQYAD--TVKYLSEKKGGGTGAQ---YEDGKQYTTLEK 109 (197)
T ss_dssp HHHHTTCCS--SSEEEE-----TTTEEECGGGSCCSSHHHHHHHHHH--HHHHHTC------------CCBTTTEEECSS
T ss_pred HHHHcCCCc--CCEEEE-----cceEecCccccccccHHHHHHHHHH--HHHHHHhCcccccccc---cCCCCCceEccC
Confidence 456788875 599866 2345544 35677889999999998 8899999999876433 356777776543
Q ss_pred -ccCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCCcEEEEEEeCCCCc
Q 010469 450 -DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNE 498 (510)
Q Consensus 450 -~~~~~vlv~f~~~~c~~C~~~~~~~---~~~a~~~~~~~~~~~~~id~~~n~ 498 (510)
.+.+++||.||+.||++|+.+.|.+ .++++.+.+ ++.|.+++++.|.
T Consensus 110 p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~--~v~~~~~~v~~~~ 160 (197)
T 1un2_A 110 PVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE--GVKMTKYHVNFMG 160 (197)
T ss_dssp CCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT--TCCEEEEECSSSS
T ss_pred CCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC--CCEEEEeccCcCC
Confidence 3467899999999999999999999 999888875 7999999998764
No 192
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.19 E-value=1.5e-09 Score=102.60 Aligned_cols=204 Identities=19% Similarity=0.293 Sum_probs=147.3
Q ss_pred CcccccchhHHHHhcc-CCCeEEEEEecCCCCcc---hHHHHHhc-cccCceeEEEc-----CChhHHHhhCCCCCCCCC
Q 010469 202 GIYNITTLDEAERVLT-SETKVVLGYLNSLVGSE---SEVLADAS-RLEDDVNFYQT-----TNPDVAKIFHLDSKVNRP 271 (510)
Q Consensus 202 ~~~~i~~~~~~~~~~~-~~~~~~v~~~~~~~~~~---~~~~~~~~-~~~~~~~f~~~-----~~~~l~~~~~~~~~~~~p 271 (510)
.+.+++. +++++.+. .+..++|.|+.+++... ...+.+++ .+...+.|+.+ .+.+++++|++.. .|
T Consensus 18 ~vv~lt~-~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~---~P 93 (298)
T 3ed3_A 18 HISELTP-KSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNG---FP 93 (298)
T ss_dssp TCEECCH-HHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCB---SS
T ss_pred CeEEeCH-HHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCc---cc
Confidence 4566644 78888884 45668888888888664 33455555 55555666654 3568999999987 89
Q ss_pred eEEEeccCC----------------CceeeccCCCCCHHHHHHHHHhcCCCceeecCC-CchhhhccCCccceEEEEEec
Q 010469 272 ALVMVKKET----------------EKISYFADGKFDKSTIADFVFSNKLPLVTIFTR-ENAPSVFESPIKNQLLLFAVS 334 (510)
Q Consensus 272 ~l~~~~~~~----------------~~~~~y~~g~~~~~~i~~fi~~~~~p~~~~lt~-~~~~~~~~~~~~~~~v~~~~~ 334 (510)
++++|+.+. .....| .|..+.+.|.+|+....-+.+..++. +++..+........+++|...
T Consensus 94 t~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y-~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~fs~~ 172 (298)
T 3ed3_A 94 TLMVFRPPKIDLSKPIDNAKKSFSAHANEVY-SGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLFSKQ 172 (298)
T ss_dssp EEEEEECCCC-------------CCCEEEEC-CSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEEESS
T ss_pred eEEEEECCceeecccccccccccccccceee-cCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEEcCC
Confidence 999998764 136788 99999999999999999999998854 667777765445556666433
Q ss_pred cchhhHHHHHHHHHHhccCceEEEEEEcCCcccccchh--hhcC-----C-----------CCCCCcEEEEeeCCCCCcc
Q 010469 335 NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVS--EYFG-----I-----------TGEAPKVLAYTGNDDAKKH 396 (510)
Q Consensus 335 ~~~~~~~~~~~~~A~~~~~~~~f~~vd~~~~~~~~~l~--~~~g-----i-----------~~~~~P~~~i~~~~~~~~y 396 (510)
. .....|+.+|..+++++.|+.++.... . .+. +.|+ + .....|.++++.......+
T Consensus 173 ~---~~~~~f~~~A~~~~~~~~F~~v~~~~~--a-~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~ 246 (298)
T 3ed3_A 173 D---KISPVYKSIALDWLGKFDFYSISNKKL--K-QLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFW 246 (298)
T ss_dssp S---SCCHHHHHHHHHTBTTEEEEEEEGGGC--C-CCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEE
T ss_pred C---cchHHHHHHHHHhhcCcEEEEEcchHh--h-hhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceE
Confidence 2 234679999999999999999984431 1 111 2333 1 1134799999987767778
Q ss_pred cCCC-CCCHHHHHHHHHHhhc
Q 010469 397 ILDG-ELTLDKIKTFGEDFLE 416 (510)
Q Consensus 397 ~~~~-~~t~e~i~~Fi~~~~~ 416 (510)
.+.| .++.+.|.+||.+-.+
T Consensus 247 ~y~g~~~~~~~i~~fi~~~~~ 267 (298)
T 3ed3_A 247 EYEGNSINKNDISKFLRDTFS 267 (298)
T ss_dssp ECCCSSCCHHHHHHHHHHHHT
T ss_pred EeccccCCHHHHHHHHHhhcC
Confidence 8884 7999999999987554
No 193
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.19 E-value=3e-12 Score=116.42 Aligned_cols=85 Identities=14% Similarity=0.195 Sum_probs=73.1
Q ss_pred HHHHHHhhcCcccccccCCCCCCCCCCceEEE-eCcchhhHhhc--cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC
Q 010469 408 KTFGEDFLEGKLKPFFKSDPIPETNDGDVKIV-VGNNFDEIVLD--ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV 484 (510)
Q Consensus 408 ~~Fi~~~~~Gkl~~~~kSe~~p~~~~~~~~~l-~~~~f~~~v~~--~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~ 484 (510)
..|++.+..+++.+..++.+ |....|.+..+ +..+|.+.+.+ .+++|||+|||+||++|+.+.|.|.++++.+.
T Consensus 87 e~fL~~~r~~Rl~el~~~~~-~~~~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~-- 163 (245)
T 1a0r_P 87 ENCLRKYRRQCMQDMHQKLS-FGPRYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP-- 163 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCCCCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--
T ss_pred HHHHHHHHHHHHHHHHHHhh-ccCCCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--
Confidence 46999999999999887654 44457888888 68999999865 36899999999999999999999999999886
Q ss_pred CcEEEEEEeCCC
Q 010469 485 DSIVIAKMDGTT 496 (510)
Q Consensus 485 ~~~~~~~id~~~ 496 (510)
.+.|++||++.
T Consensus 164 -~v~f~kVd~d~ 174 (245)
T 1a0r_P 164 -MVKFCKIKASN 174 (245)
T ss_dssp -TSEEEEEEHHH
T ss_pred -CCEEEEEeCCc
Confidence 49999999875
No 194
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.18 E-value=1.3e-10 Score=99.71 Aligned_cols=76 Identities=18% Similarity=0.257 Sum_probs=63.6
Q ss_pred CCCe-EEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc---------------------ccHHHHHhCCC
Q 010469 109 NNKF-VMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDAT---------------------EENELAHEYDV 165 (510)
Q Consensus 109 ~~~~-~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~---------------------~~~~~~~~~~v 165 (510)
.+++ ++|+|| ++||++|+.+.|.|.++++++++. ++.++.|+++ ....+++.|++
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 104 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY--DVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGA 104 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT--CEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCC
Confidence 4565 999999 999999999999999999999873 4888888876 34578889999
Q ss_pred Cc----ccEEEEEe-CC-eeeeecCCC
Q 010469 166 QG----FPTIYFFV-DG-QHKAYNGGR 186 (510)
Q Consensus 166 ~~----~P~~~~~~-~g-~~~~y~g~~ 186 (510)
.+ +|++++++ +| ....+.|..
T Consensus 105 ~~~~~~~P~~~lid~~G~i~~~~~g~~ 131 (161)
T 3drn_A 105 KGFILPARITFVIDKKGIIRHIYNSQM 131 (161)
T ss_dssp CCSSSCCCEEEEECTTSBEEEEEECSS
T ss_pred CCcCcccceEEEECCCCEEEEEEecCC
Confidence 99 99999996 78 445777843
No 195
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.18 E-value=5.2e-11 Score=103.08 Aligned_cols=90 Identities=12% Similarity=0.215 Sum_probs=71.5
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-------c----HHHHH-hC-------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------E----NELAH-EY------------- 163 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~~~~-~~------------- 163 (510)
.+++++|+||++||++|+.++|.+.++++++++. ++.++.|+++. . .++++ ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 108 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ--GLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVN 108 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC--CEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccC
Confidence 6789999999999999999999999999999873 58899998752 1 22333 32
Q ss_pred ----------------CC--Cccc---EEEEEe-CC-eeeeecCCCCHHHHHHHHHHHcC
Q 010469 164 ----------------DV--QGFP---TIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 164 ----------------~v--~~~P---~~~~~~-~g-~~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
++ .++| +++++. +| ....+.|..+.+.+.++|.+.+.
T Consensus 109 ~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 109 GENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp STTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred CCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 34 5678 888885 78 44678899898999999988764
No 196
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.18 E-value=2e-11 Score=104.51 Aligned_cols=75 Identities=20% Similarity=0.249 Sum_probs=61.5
Q ss_pred CCceEEEeCcchhhHhhcc-CCcEEEEEeC-------CCChhhhhhhHHHHHHHHHhcC---CCcEEEEEEeCCCCcCcc
Q 010469 433 DGDVKIVVGNNFDEIVLDE-SKDVLLEIYA-------PWCGHCQAFEPTYNKLAKHLRG---VDSIVIAKMDGTTNEHHR 501 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~-~~~vlv~f~~-------~~c~~C~~~~~~~~~~a~~~~~---~~~~~~~~id~~~n~~~~ 501 (510)
...+..++..+|++++..+ +.+|||+||| +||++|+.+.|.|+++|+.+.. ..++.|+++|++.|....
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la 96 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLV 96 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHH
Confidence 3567889999999988643 4589999999 4999999999999999998861 137999999999887666
Q ss_pred ceeEeeee
Q 010469 502 AKVIFDVN 509 (510)
Q Consensus 502 ~~~~~~v~ 509 (510)
.+ |||+
T Consensus 97 ~~--~~I~ 102 (178)
T 3ga4_A 97 KD--LKLQ 102 (178)
T ss_dssp HH--TTCC
T ss_pred HH--cCCC
Confidence 55 5654
No 197
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.18 E-value=5.4e-11 Score=106.39 Aligned_cols=89 Identities=15% Similarity=0.136 Sum_probs=69.0
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc----c----H---HHHH------hCC-------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----E----N---ELAH------EYD------- 164 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----~----~---~~~~------~~~------- 164 (510)
.++++||+|||+||++|++++|.|.++++++++. ++.++.|+++. + . ++++ +++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~--g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~ 123 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR--GLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFE 123 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCCCSSEEBC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC--CeEEEEEECCcccccCCCCHHHHHHHHHhcccccccccceEEEE
Confidence 6789999999999999999999999999999873 58899998751 1 1 2232 332
Q ss_pred ----------------------------------------------CCcccEEEEEe-CC-eeeeecCCCCHHHHHHHHH
Q 010469 165 ----------------------------------------------VQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIK 196 (510)
Q Consensus 165 ----------------------------------------------v~~~P~~~~~~-~g-~~~~y~g~~~~~~l~~~i~ 196 (510)
|...|+++++. +| ...+|.|..+.+.+.+.|.
T Consensus 124 d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~ 203 (208)
T 2f8a_A 124 KCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIE 203 (208)
T ss_dssp CCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHH
T ss_pred EeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHH
Confidence 33348899985 78 4467889988888888888
Q ss_pred HHc
Q 010469 197 KKI 199 (510)
Q Consensus 197 ~~~ 199 (510)
+.+
T Consensus 204 ~ll 206 (208)
T 2f8a_A 204 ALL 206 (208)
T ss_dssp HHH
T ss_pred HHh
Confidence 765
No 198
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.80 E-value=2.3e-12 Score=110.46 Aligned_cols=100 Identities=18% Similarity=0.284 Sum_probs=70.2
Q ss_pred EeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHH-HHHHHh-hcCCCeEEEEEeCcccHHHHHhC-----------
Q 010469 97 VLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAA-AATELK-SANESVVLAKVDATEENELAHEY----------- 163 (510)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~-~~~~~~-~~~~~v~~~~vd~~~~~~~~~~~----------- 163 (510)
.++++.+...-..+++++|+||++||++|+.+.|.|.+ ++++++ + .++.++.|++++.++.++++
T Consensus 20 ~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~--~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 97 (159)
T 2ls5_A 20 LTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDN--ADFALIGIDRDEPLEKVLAFAKSTGVTYPLG 97 (159)
Confidence 34444444322357899999999999999999999998 888886 3 36888888887665433333
Q ss_pred -----------C--CCcccEEEEE-eCCee-eeecCCCCHHHHHHHHHHHc
Q 010469 164 -----------D--VQGFPTIYFF-VDGQH-KAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 164 -----------~--v~~~P~~~~~-~~g~~-~~y~g~~~~~~l~~~i~~~~ 199 (510)
+ +.++|+++++ ++|+. ..+.| .+.+.+.+++.+..
T Consensus 98 ~d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l~ 147 (159)
T 2ls5_A 98 LDPGADIFAKYALRDAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQIN 147 (159)
Confidence 3 5679999999 57854 45555 45566666665443
No 199
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.17 E-value=8e-11 Score=101.78 Aligned_cols=89 Identities=12% Similarity=0.147 Sum_probs=69.0
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-------c----HHHH-HhC-------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------E----NELA-HEY------------- 163 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~~~-~~~------------- 163 (510)
.+++++|+||++||++|+.++|.+.++++++++. ++.++.|+++. . ..++ +++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 107 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK--GLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVN 107 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCS
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC--CeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeec
Confidence 6789999999999999999999999999999873 58888998752 1 1221 221
Q ss_pred ----------------C-----CCcccEEEEEe-CC-eeeeecCCCCHHHHHHHHHHHc
Q 010469 164 ----------------D-----VQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 164 ----------------~-----v~~~P~~~~~~-~g-~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
+ |+.+|+++++. +| ....+.|..+.+.+.+.|.+.+
T Consensus 108 ~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 166 (169)
T 2v1m_A 108 GSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELL 166 (169)
T ss_dssp STTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred CccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHh
Confidence 3 34468999985 77 4467889888888888888765
No 200
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.17 E-value=1.7e-11 Score=97.89 Aligned_cols=68 Identities=19% Similarity=0.292 Sum_probs=60.1
Q ss_pred CceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 434 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 434 ~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
..+..++.++|.+.+.+.+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+.....+
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~--~v~~~~vd~~~~~~l~~~ 71 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE--SFGFYYVDVEEEKTLFQR 71 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHH
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC--ceEEEEEECCcChhHHHh
Confidence 45788999999999977789999999999999999999999999999876 799999999987754443
No 201
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.17 E-value=3.5e-11 Score=104.38 Aligned_cols=90 Identities=21% Similarity=0.306 Sum_probs=71.8
Q ss_pred CCCeEEEEEECCCChH-HhhhhHHHHHHHHHHhhcC-CCeEEEEEeCccc----------------------------HH
Q 010469 109 NNKFVMVEFYAPWCGH-CQALAPEYAAAATELKSAN-ESVVLAKVDATEE----------------------------NE 158 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~-C~~~~p~~~~~~~~~~~~~-~~v~~~~vd~~~~----------------------------~~ 158 (510)
.+++++|+||++||++ |+.+.|.+.++++++++.+ .++.++.|+++.+ ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 5789999999999997 9999999999999887521 2588999987642 24
Q ss_pred HHHhCCC---------------CcccEEEEEeCCe-eeeecCCC--CHHHHHHHHHHH
Q 010469 159 LAHEYDV---------------QGFPTIYFFVDGQ-HKAYNGGR--TKDAIVTWIKKK 198 (510)
Q Consensus 159 ~~~~~~v---------------~~~P~~~~~~~g~-~~~y~g~~--~~~~l~~~i~~~ 198 (510)
+++.|++ .++|+++++++|+ ...+.|.. +.+.+.+.|++.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 5566654 5789999999774 45778887 889999888764
No 202
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.17 E-value=2.9e-12 Score=115.10 Aligned_cols=86 Identities=15% Similarity=0.213 Sum_probs=73.4
Q ss_pred HHHHHHHHhhcCcccccccCCCCCCCCCCceEEE-eCcchhhHhhccC--CcEEEEEeCCCChhhhhhhHHHHHHHHHhc
Q 010469 406 KIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIV-VGNNFDEIVLDES--KDVLLEIYAPWCGHCQAFEPTYNKLAKHLR 482 (510)
Q Consensus 406 ~i~~Fi~~~~~Gkl~~~~kSe~~p~~~~~~~~~l-~~~~f~~~v~~~~--~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~ 482 (510)
+.+.|++.+..+++.+..++.+ |....+.+..+ ++.+|.+.+.++. ++|||+||++||++|+.+.|.|.++++.+.
T Consensus 72 ~d~~fl~~~r~~Rl~el~~~~~-~~~~~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~ 150 (217)
T 2trc_P 72 EDEGCLRKYRRQCMQDMHQKLS-FGPRYGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP 150 (217)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHC-CCCCCCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT
T ss_pred ccHHHHHHHHHHHHHHHHHHHH-hccCCCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC
Confidence 3567999999999988766543 44457888888 8899999997654 799999999999999999999999999885
Q ss_pred CCCcEEEEEEeCC
Q 010469 483 GVDSIVIAKMDGT 495 (510)
Q Consensus 483 ~~~~~~~~~id~~ 495 (510)
.+.|++||++
T Consensus 151 ---~v~f~~vd~~ 160 (217)
T 2trc_P 151 ---MVKFCKIRAS 160 (217)
T ss_dssp ---TSEEEEEEHH
T ss_pred ---CeEEEEEECC
Confidence 6999999998
No 203
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=2.5e-11 Score=100.43 Aligned_cols=71 Identities=34% Similarity=0.712 Sum_probs=60.5
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC--CCcEEEEEEeCCCCcCccce
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG--VDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~--~~~~~~~~id~~~n~~~~~~ 503 (510)
.+.+..++.++|.+.+.+.+++++|+||++||++|+.+.|.+.++++.+.. ..++.|+.+|++.+.....+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~ 78 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASR 78 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHH
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHh
Confidence 566889999999998877789999999999999999999999999998861 12699999999987654433
No 204
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.16 E-value=5.3e-11 Score=104.20 Aligned_cols=89 Identities=15% Similarity=0.165 Sum_probs=69.6
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-------c----HHHHHh-C-------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------E----NELAHE-Y------------- 163 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~~~~~-~------------- 163 (510)
.+++++|+||++||++|+.++|.|.++++++++. ++.++.|+++. . .+++++ +
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 125 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH--HFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVT 125 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC--CEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccC
Confidence 6789999999999999999999999999999873 58899998753 1 123333 1
Q ss_pred ----------CCCccc-------EEEEEe-CC-eeeeecCCCCHHHHHHHHHHHc
Q 010469 164 ----------DVQGFP-------TIYFFV-DG-QHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 164 ----------~v~~~P-------~~~~~~-~g-~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
.+.++| +++++. +| ....+.|..+.+.+.+.|.+.+
T Consensus 126 g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 126 GTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp STTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred CccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 244678 788885 77 4457889999999999888754
No 205
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.16 E-value=4.6e-11 Score=94.62 Aligned_cols=67 Identities=28% Similarity=0.579 Sum_probs=59.1
Q ss_pred CceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 434 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 434 ~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
..+..+++++|.+.+...+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+.....
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~ 68 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG--KVTVAKVNIDDNPETPN 68 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT--SEEEEEEETTTCCHHHH
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC--cEEEEEEECCCCHHHHH
Confidence 45788999999988877789999999999999999999999999999976 79999999988765443
No 206
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.16 E-value=2.3e-11 Score=100.23 Aligned_cols=68 Identities=29% Similarity=0.633 Sum_probs=60.3
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
.+.+..++.++|++.+.+.+++++|+||++||++|+.+.|.+.++++.+++ .+.|+.+|++.+.....
T Consensus 16 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~l~~ 83 (130)
T 2dml_A 16 SDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD--VVKVGAVNADKHQSLGG 83 (130)
T ss_dssp TSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT--TSEEEEEETTTCHHHHH
T ss_pred CCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC--ceEEEEEeCCCCHHHHH
Confidence 567899999999998877789999999999999999999999999999876 69999999988765443
No 207
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.15 E-value=1e-11 Score=115.22 Aligned_cols=82 Identities=21% Similarity=0.374 Sum_probs=63.8
Q ss_pred cHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc------ccHHHHHhCCCCcccEEEEEe
Q 010469 102 NFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT------EENELAHEYDVQGFPTIYFFV 175 (510)
Q Consensus 102 ~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~------~~~~~~~~~~v~~~P~~~~~~ 175 (510)
.+.+.+.+. .+|.|||+||+||+++.|.|+++++++ . .+||+ +++++|++++|+++||+++
T Consensus 191 ~la~~l~~~--~vV~F~A~WC~~Ck~l~p~le~lA~~l-------~--~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i-- 257 (291)
T 3kp9_A 191 GLAAHLRQI--GGTMYGAYWCPHCQDQKELFGAAFDQV-------P--YVECSPNGPGTPQAQECTEAGITSYPTWII-- 257 (291)
T ss_dssp HHHHHHHHT--TCEEEECTTCHHHHHHHHHHGGGGGGS-------C--EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--
T ss_pred HHHHHhCCC--CEEEEECCCCHHHHHHHHHHHHHHHHc-------C--EEEEeecCchhhHHHHHHHcCCcccCeEEE--
Confidence 344444333 379999999999999999999988544 2 34554 3789999999999999544
Q ss_pred CCeeeeecCCCCHHHHHHHHHHH
Q 010469 176 DGQHKAYNGGRTKDAIVTWIKKK 198 (510)
Q Consensus 176 ~g~~~~y~g~~~~~~l~~~i~~~ 198 (510)
+|+. |.|.++.+++.+|+...
T Consensus 258 ~G~~--~~G~~~~~~L~~~l~~~ 278 (291)
T 3kp9_A 258 NGRT--YTGVRSLEALAVASGYP 278 (291)
T ss_dssp TTEE--EESCCCHHHHHHHTCCC
T ss_pred CCEE--ecCCCCHHHHHHHHCCC
Confidence 8863 99999999999998543
No 208
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.15 E-value=5.8e-11 Score=107.61 Aligned_cols=73 Identities=23% Similarity=0.554 Sum_probs=63.9
Q ss_pred CCCCCCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 429 PETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 429 p~~~~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
+....+.+..++.++|++.+.+++++++|+||++||++|+.+.|.+.++++.+++ ++.|+.+|++.+.....+
T Consensus 7 ~~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~l~~~ 79 (222)
T 3dxb_A 7 HHPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPK 79 (222)
T ss_dssp --CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCTTTGGG
T ss_pred CCCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CcEEEEEECCCCHHHHHH
Confidence 3344778899999999998888889999999999999999999999999999986 699999999988776655
No 209
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.15 E-value=4.2e-11 Score=95.78 Aligned_cols=68 Identities=31% Similarity=0.623 Sum_probs=59.5
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
.+.+..++.++|.+.+.+.+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+.....
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~ 71 (112)
T 1t00_A 4 AGTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD--KIEIVKLNIDENPGTAA 71 (112)
T ss_dssp SCCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHH
T ss_pred cceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC--CeEEEEEEcCCCHHHHH
Confidence 356788999999998887789999999999999999999999999999876 69999999988764433
No 210
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.14 E-value=4.9e-11 Score=99.76 Aligned_cols=65 Identities=18% Similarity=0.338 Sum_probs=55.3
Q ss_pred eCcchhhHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccceeEeee
Q 010469 440 VGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKVIFDV 508 (510)
Q Consensus 440 ~~~~f~~~v~~-~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~~~~~v 508 (510)
++++|++.+.+ ++++++|+|||+||++|+.+.|.+.++++.+.+ ++.|+.+|++.+.....+ |+|
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~~~~~--~~i 75 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN--FAVIYLVDITEVPDFNKM--YEL 75 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCTTTTS--SCS
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CeEEEEEccccCHHHHHH--cCC
Confidence 45688887765 678999999999999999999999999999976 799999999988765554 444
No 211
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.14 E-value=5.2e-11 Score=95.10 Aligned_cols=61 Identities=33% Similarity=0.609 Sum_probs=55.0
Q ss_pred CCCceEEEeCcchhhHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 432 NDGDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 432 ~~~~~~~l~~~~f~~~v~~-~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
..+.+..++.++|.+.+.+ .+++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++
T Consensus 3 ~~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~ 64 (111)
T 2pu9_C 3 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL---DVIFLKLDCN 64 (111)
T ss_dssp CTTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECS
T ss_pred CcCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC---CeEEEEEecC
Confidence 3577899999999998875 57899999999999999999999999999886 4999999997
No 212
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.14 E-value=2.7e-11 Score=98.61 Aligned_cols=67 Identities=28% Similarity=0.615 Sum_probs=58.7
Q ss_pred CceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 434 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 434 ~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
+.+..++.++|.+.+.+.+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+.....
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~ 69 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG--KVRAGKVDCQAYPQTCQ 69 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTCHHHHH
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCcCCHHHHH
Confidence 45778999999887777789999999999999999999999999999986 79999999998764433
No 213
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.13 E-value=3.7e-11 Score=100.38 Aligned_cols=69 Identities=26% Similarity=0.438 Sum_probs=60.9
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
...+..++.++|.+.+.+.+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+.....+
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~ 73 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS--SAVFGRINIATNPWTAEK 73 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTCHHHHHH
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC--ceEEEEEECCcCHhHHHH
Confidence 457889999999988877889999999999999999999999999999986 799999999987654443
No 214
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.12 E-value=2.7e-11 Score=98.10 Aligned_cols=71 Identities=24% Similarity=0.535 Sum_probs=61.1
Q ss_pred CCCCCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 430 ETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 430 ~~~~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
......+..++.++|.+.+.+.+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+.....
T Consensus 9 ~~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~--~v~~~~vd~d~~~~l~~ 79 (119)
T 1w4v_A 9 HHGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG--KVVMAKVDIDDHTDLAI 79 (119)
T ss_dssp -CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--SSEEEEEETTTTHHHHH
T ss_pred cCCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCHHHHH
Confidence 334667888999999998888889999999999999999999999999998876 69999999988764433
No 215
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.12 E-value=6.5e-11 Score=94.69 Aligned_cols=64 Identities=23% Similarity=0.509 Sum_probs=56.5
Q ss_pred eEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 436 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 436 ~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
+..++.++|++.+ .+++++|+||++||++|+.+.|.+.++++.+++ ++.|+.+|++.+.....+
T Consensus 3 v~~l~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~vd~~~~~~l~~~ 66 (112)
T 2voc_A 3 IVKATDQSFSAET--SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD--KLKIVKIDVDENQETAGK 66 (112)
T ss_dssp CEECCTTTHHHHH--SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT--TCEEEEEETTTCCSHHHH
T ss_pred eEEecHHHHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHH
Confidence 5678899999988 678999999999999999999999999999976 799999999987655444
No 216
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.12 E-value=1.1e-10 Score=102.02 Aligned_cols=103 Identities=17% Similarity=0.129 Sum_probs=73.6
Q ss_pred cEEeChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-------c----HHHHHh-
Q 010469 95 VVVLKERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------E----NELAHE- 162 (510)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~~~~~- 162 (510)
+..++++.+...-.++++++|+||++||++|+.++|.+.++++++++ .++.++.|+++. . .+++++
T Consensus 23 l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~--~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~ 100 (180)
T 3kij_A 23 VKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGP--SHFSVLAFPCNQFGESEPRPSKEVESFARKN 100 (180)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTT--TSEEEEEEECCCSTTCCCSCHHHHHHHHHHH
T ss_pred EecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhcc--CCeEEEEEECCccccCCCCCHHHHHHHHHHh
Confidence 34444444433223678999999999999999999999999999987 358888887653 2 234445
Q ss_pred CCCC--------------------------cccE----EEEEe-CC-eeeeecCCCCHHHHHHHHHHHc
Q 010469 163 YDVQ--------------------------GFPT----IYFFV-DG-QHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 163 ~~v~--------------------------~~P~----~~~~~-~g-~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
+++. ++|+ ++++. +| ....|.|..+.+.+.+.|.+.+
T Consensus 101 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 169 (180)
T 3kij_A 101 YGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALV 169 (180)
T ss_dssp HCCCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHH
T ss_pred cCCCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 4321 2676 77775 78 4468889888877777777665
No 217
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=99.11 E-value=2e-10 Score=92.78 Aligned_cols=104 Identities=14% Similarity=0.255 Sum_probs=91.0
Q ss_pred HHcCCCccc--ccchhHHHHhccCCCeEEEEEecCCCCcchHHHHHhccccCceeEEEcCChhHHHhhCCCCCCCCCeEE
Q 010469 197 KKIGPGIYN--ITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADASRLEDDVNFYQTTNPDVAKIFHLDSKVNRPALV 274 (510)
Q Consensus 197 ~~~~~~~~~--i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~~~~~~~p~l~ 274 (510)
+..+|+... |++.+++++|+..+++++|+||.+++++....|.++|....++.|+.+.+++++++++++. |+++
T Consensus 15 kq~gP~~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~~~~F~~~A~~~~d~~F~~t~~~~v~~~~~v~~----~~vv 90 (124)
T 2l4c_A 15 DGPGAAQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNITG----NTIC 90 (124)
T ss_dssp CCSCCSCCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTHHHHHHHHHHHCTTSEEEEECCHHHHHHTTCCS----SCEE
T ss_pred hccCCCCcceEcCCHHHHHHHHhcCCCEEEEEECCCCChhHHHHHHHHHhCCCceEEEEChHHHHHHcCCCC----CeEE
Confidence 455666644 8999999999999999999999999999999999988544999999999999999999984 8999
Q ss_pred EeccCCCceeeccCC----CCCHHHHHHHHHhcCC
Q 010469 275 MVKKETEKISYFADG----KFDKSTIADFVFSNKL 305 (510)
Q Consensus 275 ~~~~~~~~~~~y~~g----~~~~~~i~~fi~~~~~ 305 (510)
+|++.++....| .| +++.++|.+||..+++
T Consensus 91 lfkkfde~~~~~-~g~~~~~~~~~~L~~FI~~n~l 124 (124)
T 2l4c_A 91 LFRLVDNEQLNL-EDEDIESIDATKLSRFIEINSL 124 (124)
T ss_dssp EEETTTTEEEEE-CHHHHTTCCHHHHHHHHHHHCC
T ss_pred EEEcCCCCceee-cCcccCCCCHHHHHHHHHHhcC
Confidence 999988788889 65 7899999999998763
No 218
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.11 E-value=3.8e-11 Score=101.33 Aligned_cols=63 Identities=13% Similarity=0.076 Sum_probs=53.8
Q ss_pred EeCcchhhHhh-ccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 439 VVGNNFDEIVL-DESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 439 l~~~~f~~~v~-~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
.++++|++.+. +.+++|+|+|||+||++|+.+.|.+.++++.+.+ ++.|+.+|++.+.....+
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~--~~~~~~vd~d~~~~l~~~ 72 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK--MAAIYLVDVDQTAVYTQY 72 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT--TEEEEEEETTTCCHHHHH
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCcCHHHHHH
Confidence 35678999887 5688999999999999999999999999998876 699999999877654443
No 219
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.10 E-value=6.6e-12 Score=102.50 Aligned_cols=70 Identities=11% Similarity=0.047 Sum_probs=60.8
Q ss_pred ceEEEeCcchhhHhhccCCcEEEEEeCCC--ChhhhhhhHHHHHHHHHhcCCCc-EEEEEEeCCCCcCccceeEeeee
Q 010469 435 DVKIVVGNNFDEIVLDESKDVLLEIYAPW--CGHCQAFEPTYNKLAKHLRGVDS-IVIAKMDGTTNEHHRAKVIFDVN 509 (510)
Q Consensus 435 ~~~~l~~~~f~~~v~~~~~~vlv~f~~~~--c~~C~~~~~~~~~~a~~~~~~~~-~~~~~id~~~n~~~~~~~~~~v~ 509 (510)
.+..++..+|++.+. ++.+|||+||++| |++|+.+.|++.++++.+.+ + +.|+++|++.|...+.+ |||+
T Consensus 18 g~~~~t~~~F~~~v~-~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g--~~v~~~KVdvDe~~~lA~~--ygV~ 90 (140)
T 2qgv_A 18 GWTPVSESRLDDWLT-QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD--YTWQVAIADLEQSEAIGDR--FGAF 90 (140)
T ss_dssp TCEECCHHHHHHHHH-TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT--SCCEEEECCHHHHHHHHHH--HTCC
T ss_pred CCccCCHHHHHHHHh-CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC--CeEEEEEEECCCCHHHHHH--cCCc
Confidence 456789999999995 6779999999999 99999999999999999986 7 99999999988766665 6664
No 220
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.10 E-value=4e-11 Score=100.36 Aligned_cols=69 Identities=23% Similarity=0.491 Sum_probs=59.2
Q ss_pred CCceEEEeCcchhhHhhc-----------cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCcc
Q 010469 433 DGDVKIVVGNNFDEIVLD-----------ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHR 501 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~-----------~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~ 501 (510)
.+.+..++..+|...+.+ .+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+....
T Consensus 21 ~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~ 98 (141)
T 3hxs_A 21 QSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG--KIYIYKVNVDKEPELA 98 (141)
T ss_dssp --CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHH
T ss_pred CCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC--ceEEEEEECCCCHHHH
Confidence 667889999999998876 468999999999999999999999999999986 7999999999876544
Q ss_pred ce
Q 010469 502 AK 503 (510)
Q Consensus 502 ~~ 503 (510)
.+
T Consensus 99 ~~ 100 (141)
T 3hxs_A 99 RD 100 (141)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 221
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=3.6e-11 Score=100.08 Aligned_cols=70 Identities=21% Similarity=0.432 Sum_probs=59.2
Q ss_pred CCceEEEeCcchhhHhhccC-CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 433 DGDVKIVVGNNFDEIVLDES-KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~-~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
.+.+..++.++|++.+.... ++++|+||++||++|+.+.|.+.++++.+++ .++.|+.+|++.+.....+
T Consensus 6 ~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~-~~v~~~~vd~~~~~~~~~~ 76 (137)
T 2dj0_A 6 SGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNC-TGLNFGKVDVGRYTDVSTR 76 (137)
T ss_dssp CSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCS-SSCEEEECCTTTCHHHHHH
T ss_pred CceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCccCHHHHHH
Confidence 34688899999999987654 4999999999999999999999999999974 4799999999887654433
No 222
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.10 E-value=5.6e-11 Score=94.13 Aligned_cols=65 Identities=25% Similarity=0.614 Sum_probs=57.2
Q ss_pred eEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 436 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 436 ~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
+..++.++|.+.+.+++++++|+||++||++|+.+.|.+.++++.+++ ++.++.+|++.+.....
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~ 67 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD--KLKCVKLNTDESPNVAS 67 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHH
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC--ceEEEEEECCCCHHHHH
Confidence 567899999998887889999999999999999999999999999876 69999999987754433
No 223
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.09 E-value=8.2e-11 Score=94.49 Aligned_cols=68 Identities=25% Similarity=0.482 Sum_probs=59.6
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
.+.+..+++++|...+...+++++|+||++||++|+.+.|.+.++++.+++ ++.|+.+|++.+.....
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~ 73 (115)
T 1thx_A 6 SKGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD--RLKVVKLEIDPNPTTVK 73 (115)
T ss_dssp CCSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEESTTCHHHHH
T ss_pred cCceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC--cEEEEEEEcCCCHHHHH
Confidence 456888999999998877789999999999999999999999999999876 69999999987764333
No 224
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.09 E-value=1.7e-10 Score=101.20 Aligned_cols=88 Identities=15% Similarity=0.155 Sum_probs=66.7
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-------cH----HHHHhC--------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------EN----ELAHEY-------------- 163 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~~----~~~~~~-------------- 163 (510)
.+++++|+||++||++|+.+.|.|.++++++++. ++.++.|+++. .+ ++++++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 123 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC--GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNG 123 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC--CeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCC
Confidence 6789999999999999999999999999999873 58888888752 11 122222
Q ss_pred -----------------C-----CCcccEEEEEe-CC-eeeeecCCCCHHHHHHHHHHH
Q 010469 164 -----------------D-----VQGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKK 198 (510)
Q Consensus 164 -----------------~-----v~~~P~~~~~~-~g-~~~~y~g~~~~~~l~~~i~~~ 198 (510)
+ |+.+|+++++. +| ....+.|..+.+.+.++|.+.
T Consensus 124 ~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 124 DDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp TTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGG
T ss_pred cchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 2 33359999995 78 446788988888888776554
No 225
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.09 E-value=1.8e-10 Score=101.14 Aligned_cols=88 Identities=14% Similarity=0.102 Sum_probs=66.8
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-------c----HHHHHhCCC------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------E----NELAHEYDV------------ 165 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~~~~~~~v------------ 165 (510)
.+++++|+||++||++|+.+.|.+.++++++++. ++.++.|+++. . .++++++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 125 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC--GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNG 125 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSS
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC--CeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCC
Confidence 6789999999999999999999999999999873 58888888752 1 223333322
Q ss_pred ------------------------CcccEEEEEe-CC-eeeeecCCCCHHHHHHHHHHH
Q 010469 166 ------------------------QGFPTIYFFV-DG-QHKAYNGGRTKDAIVTWIKKK 198 (510)
Q Consensus 166 ------------------------~~~P~~~~~~-~g-~~~~y~g~~~~~~l~~~i~~~ 198 (510)
+.+|+++++. +| ....+.|..+.+.+.+.|++.
T Consensus 126 ~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 126 DDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp TTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHH
T ss_pred hhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHh
Confidence 2258999995 77 446788888888887777654
No 226
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.09 E-value=2e-10 Score=101.13 Aligned_cols=89 Identities=18% Similarity=0.282 Sum_probs=72.8
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-------------------------cHHHHHh
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------------------------ENELAHE 162 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------------------------~~~~~~~ 162 (510)
.+++++|+|| ++||++|+.+.|.+.++++++++. ++.++.|+++. +..+++.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL--GVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQ 107 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT--TEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHH
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc--CCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHH
Confidence 5789999999 999999999999999999999873 58888887764 3467888
Q ss_pred CCCC------cccEEEEEe-CCe-eeeecCCC----CHHHHHHHHHHHc
Q 010469 163 YDVQ------GFPTIYFFV-DGQ-HKAYNGGR----TKDAIVTWIKKKI 199 (510)
Q Consensus 163 ~~v~------~~P~~~~~~-~g~-~~~y~g~~----~~~~l~~~i~~~~ 199 (510)
|++. ++|++++++ +|+ ...+.|.. +.+.+.+.|.+..
T Consensus 108 ~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 108 FDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred hCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 9998 999999995 784 45666654 6788888887665
No 227
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.09 E-value=8.6e-11 Score=97.62 Aligned_cols=69 Identities=30% Similarity=0.608 Sum_probs=59.2
Q ss_pred CCCceEEEeCcchhhHhhc-----------cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCc
Q 010469 432 NDGDVKIVVGNNFDEIVLD-----------ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHH 500 (510)
Q Consensus 432 ~~~~~~~l~~~~f~~~v~~-----------~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~ 500 (510)
..+.+..++.++|.+.+.+ .+++++|+||++||++|+.+.|.+.++++.+++ ++.|+.+|++.+...
T Consensus 7 ~~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l 84 (136)
T 2l5l_A 7 GNGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG--QIVIYKVDTEKEQEL 84 (136)
T ss_dssp CTTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHH
T ss_pred cCCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CEEEEEEeCCCCHHH
Confidence 3567888999999998864 457999999999999999999999999999876 699999999987644
Q ss_pred cc
Q 010469 501 RA 502 (510)
Q Consensus 501 ~~ 502 (510)
..
T Consensus 85 ~~ 86 (136)
T 2l5l_A 85 AG 86 (136)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 228
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.09 E-value=8.4e-11 Score=108.29 Aligned_cols=76 Identities=24% Similarity=0.544 Sum_probs=63.1
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CCcEEEEEEeCCCCcCccceeEeee
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG-VDSIVIAKMDGTTNEHHRAKVIFDV 508 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~-~~~~~~~~id~~~n~~~~~~~~~~v 508 (510)
.+.+..+++.+|++.+.+++++++|+|||+||++|+.+.|.|.++++.+.+ ...+.|+.+|++.+.......+|||
T Consensus 11 ~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v 87 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNI 87 (244)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTC
T ss_pred CCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCC
Confidence 567899999999999988889999999999999999999999999999875 2379999999965444443333444
No 229
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.09 E-value=9e-11 Score=92.54 Aligned_cols=63 Identities=30% Similarity=0.663 Sum_probs=56.4
Q ss_pred eEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCc
Q 010469 436 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHH 500 (510)
Q Consensus 436 ~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~ 500 (510)
+..+++++|++.+.+++++++|+||++||++|+.+.|.+.++++.+++ ++.++.+|++.+...
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~ 64 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG--KIAVYKLNTDEAPGI 64 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHH
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC--ceEEEEEcCcchHHH
Confidence 567899999998887789999999999999999999999999999876 699999999877543
No 230
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.09 E-value=4.9e-11 Score=96.08 Aligned_cols=86 Identities=16% Similarity=0.375 Sum_probs=61.6
Q ss_pred cHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc-----HHHHHhCCCCcccEEEEEeC
Q 010469 102 NFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-----NELAHEYDVQGFPTIYFFVD 176 (510)
Q Consensus 102 ~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-----~~~~~~~~v~~~P~~~~~~~ 176 (510)
.+++++.. +++++ ||++||++|+.+.|.|.++.. .+.++.||.+.+ ..+++++++.++|++ |.+
T Consensus 12 ~~~~~~~~-~~vv~-f~a~~C~~C~~~~~~l~~~~~-------~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~ 80 (116)
T 2e7p_A 12 KAKELASS-APVVV-FSKTYCGYCNRVKQLLTQVGA-------SYKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIG 80 (116)
T ss_dssp HHHHHHTS-SSEEE-EECTTCHHHHHHHHHHHHHTC-------CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EET
T ss_pred HHHHHHcC-CCEEE-EECCCChhHHHHHHHHHHcCC-------CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EEC
Confidence 34455544 45555 999999999999999988642 356677776655 568999999999999 557
Q ss_pred Cee-eeecCCC---CHHHHHHHHHHH
Q 010469 177 GQH-KAYNGGR---TKDAIVTWIKKK 198 (510)
Q Consensus 177 g~~-~~y~g~~---~~~~l~~~i~~~ 198 (510)
|+. ..+.|.. +.+.|.++|.+.
T Consensus 81 g~~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 81 GKQIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp TEEEECHHHHHHHHHTTCHHHHHHHT
T ss_pred CEEECChHHHHHHHhCChHHHHHHHc
Confidence 844 4555544 556677777653
No 231
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.09 E-value=9.3e-11 Score=95.16 Aligned_cols=69 Identities=28% Similarity=0.538 Sum_probs=59.4
Q ss_pred CCCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 432 NDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 432 ~~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
..+.+..++..+|.+.+.+.+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+.....
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~ 78 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT--DLTVAKLDVDTNPETAR 78 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHH
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHH
Confidence 3567888999999998887889999999999999999999999999999876 69999999987764433
No 232
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.09 E-value=9.5e-11 Score=92.59 Aligned_cols=65 Identities=32% Similarity=0.504 Sum_probs=57.3
Q ss_pred ceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 435 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 435 ~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
.+..++.++|++.+ .+++++|+||++||++|+.+.|.+.++++.+++ ++.|+.+|++.+.....+
T Consensus 4 ~v~~l~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~ 68 (106)
T 3die_A 4 AIVKVTDADFDSKV--ESGVQLVDFWATACGPCKMIAPVLEELAADYEG--KADILKLDVDENPSTAAK 68 (106)
T ss_dssp CCEECCTTTHHHHS--CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHH
T ss_pred ceEECCHHHHHHHh--cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CcEEEEEECCcCHHHHHh
Confidence 46788999999988 678999999999999999999999999999986 699999999887654443
No 233
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.08 E-value=7.9e-10 Score=92.76 Aligned_cols=94 Identities=14% Similarity=0.237 Sum_probs=73.1
Q ss_pred cHHHHH----hCCCeEEEEEECCCChHHhhhhHHH---HHHHHHHhhcCCCeEEEEEeCcc--cHHHHHhCCCCcccEEE
Q 010469 102 NFSDVI----ENNKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVDATE--ENELAHEYDVQGFPTIY 172 (510)
Q Consensus 102 ~~~~~~----~~~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~P~~~ 172 (510)
++++.+ ..+|+++|+||++||.+|+.+.... .++++.++. ++.++.+|.+. ...+.++|++.++|+++
T Consensus 30 ~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~---~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~ 106 (153)
T 2dlx_A 30 SFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE---HFIFWQVYHDSEEGQRYIQFYKLGDFPYVS 106 (153)
T ss_dssp CHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH---TEEEEEEESSSHHHHHHHHHHTCCSSSEEE
T ss_pred CHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc---CeEEEEEecCCHhHHHHHHHcCCCCCCEEE
Confidence 455443 4589999999999999999997654 555656655 68999999865 34688999999999999
Q ss_pred EEe-C-C-eeeeecCCCCHHHHHHHHHHHc
Q 010469 173 FFV-D-G-QHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 173 ~~~-~-g-~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
++. + | ....+.| .+.+.+.++|++.+
T Consensus 107 fld~~~G~~l~~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 107 ILDPRTGQKLVEWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp EECTTTCCCCEEESS-CCHHHHHHHHHHHH
T ss_pred EEeCCCCcEeeecCC-CCHHHHHHHHHHHH
Confidence 996 4 6 3344555 89999999988776
No 234
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.08 E-value=6.7e-11 Score=98.81 Aligned_cols=70 Identities=40% Similarity=0.821 Sum_probs=59.2
Q ss_pred CCCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-CcEEEEEEeCCCCcCccc
Q 010469 432 NDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 432 ~~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~-~~~~~~~id~~~n~~~~~ 502 (510)
..+.+..+++++|++.+. .++++||+||++||++|+.+.|.+.++++.+.+. .++.|+.+|++.+.....
T Consensus 15 ~~~~v~~l~~~~~~~~~~-~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~ 85 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFVA-DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLAS 85 (140)
T ss_dssp EETTEEECCTTTHHHHHT-TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHH
T ss_pred CCCCCEEcChHhHHHHHh-cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHH
Confidence 367789999999998775 4689999999999999999999999999998762 249999999998754433
No 235
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.08 E-value=1.2e-10 Score=91.96 Aligned_cols=64 Identities=22% Similarity=0.570 Sum_probs=54.6
Q ss_pred eEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 436 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 436 ~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
+..++.++|++ +.+.+++++|+||++||++|+.+.|.+.++++.+.+ ++.++.+|++.+.....
T Consensus 2 v~~l~~~~~~~-~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~ 65 (105)
T 1nsw_A 2 TMTLTDANFQQ-AIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD--KVTVAKLNVDENPETTS 65 (105)
T ss_dssp CEEECTTTHHH-HHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--TCEEEEEETTTCHHHHH
T ss_pred ceeccHHhHHH-HHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CcEEEEEECcCCHHHHH
Confidence 56789999995 445678999999999999999999999999999876 69999999988754433
No 236
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.07 E-value=3.1e-10 Score=100.91 Aligned_cols=89 Identities=10% Similarity=0.217 Sum_probs=73.2
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc----------------------------cHHH
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~~ 159 (510)
.+++++|+|| ++||++|+.+.|.+.++++++++. ++.++.|+++. +..+
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK--GFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSI 109 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT--TEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHH
Confidence 5789999999 999999999999999999999873 58888887763 3468
Q ss_pred HHhCCCC-----cccEEEEEe-CCee-eeecCCC----CHHHHHHHHHHHc
Q 010469 160 AHEYDVQ-----GFPTIYFFV-DGQH-KAYNGGR----TKDAIVTWIKKKI 199 (510)
Q Consensus 160 ~~~~~v~-----~~P~~~~~~-~g~~-~~y~g~~----~~~~l~~~i~~~~ 199 (510)
++.|++. ++|++++++ +|+. ..+.|.. +.+.+.+.|.+..
T Consensus 110 ~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 110 SRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 8899999 999999996 7844 4666654 5688888887664
No 237
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.07 E-value=9.9e-11 Score=92.42 Aligned_cols=63 Identities=16% Similarity=0.223 Sum_probs=46.2
Q ss_pred eCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccceeEeee
Q 010469 440 VGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKVIFDV 508 (510)
Q Consensus 440 ~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~~~~~v 508 (510)
+.++|++.+ +.+++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++.+.....+ |||
T Consensus 7 ~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~~~~~~l~~~--~~v 69 (105)
T 4euy_A 7 TIEELATYI-EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN---YVEKIEILLQDMQEIAGR--YAV 69 (105)
T ss_dssp ---CCSSST-TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT---TEEEEEEEECCC-----------
T ss_pred CHHHHHHHH-hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC---CceEEEEECCCCHHHHHh--cCC
Confidence 557888877 567899999999999999999999999999874 699999999988765544 554
No 238
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.07 E-value=9e-11 Score=99.78 Aligned_cols=68 Identities=24% Similarity=0.550 Sum_probs=59.3
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
.+.+..++..+|.+.+ ..++++||+||++||++|+.+.|.|.++++.+.+ ++.|+.+|++.+.....+
T Consensus 46 ~~~~~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~--~v~~~~vd~~~~~~l~~~ 113 (155)
T 2ppt_A 46 TGKVAGIDPAILARAE-RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG--QVRLAKIDTQAHPAVAGR 113 (155)
T ss_dssp CSSEEECCHHHHHHHT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTSTHHHHH
T ss_pred CCCCccCCHHHHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC--CEEEEEEeCCccHHHHHH
Confidence 5667889999999988 6678999999999999999999999999999986 699999999987654433
No 239
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.07 E-value=1.1e-10 Score=93.17 Aligned_cols=69 Identities=32% Similarity=0.641 Sum_probs=58.0
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-CcEEEEEEeCCCCcCccce
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~-~~~~~~~id~~~n~~~~~~ 503 (510)
.+.+..++.++|++.+. +++++|+||++||++|+.+.|.+.++++.+... .++.++.+|++.+.....+
T Consensus 4 ~~~v~~l~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~ 73 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA--EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSK 73 (111)
T ss_dssp -CCSEECCTTTHHHHHH--SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHH
T ss_pred CCcceEcChhhHHHHhc--CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHh
Confidence 35678899999999887 679999999999999999999999999987542 4799999999987654433
No 240
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=99.07 E-value=8e-11 Score=87.78 Aligned_cols=61 Identities=21% Similarity=0.316 Sum_probs=49.4
Q ss_pred EEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc-ccHHHHHhCCCCcccEEEEEeCCee
Q 010469 114 MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT-EENELAHEYDVQGFPTIYFFVDGQH 179 (510)
Q Consensus 114 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~-~~~~~~~~~~v~~~P~~~~~~~g~~ 179 (510)
++.||++||++|+.+.|.++++++++.. .+.++.||.+ +..++++++|++++|++++ +|+.
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~~ 65 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKY---TVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGAA 65 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTE---EEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCC---eEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCEE
Confidence 7889999999999999999988765432 4666666654 5678899999999999877 7754
No 241
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.07 E-value=3e-10 Score=97.15 Aligned_cols=87 Identities=13% Similarity=0.216 Sum_probs=67.8
Q ss_pred CCC-eEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-----------------------cHHHHHhC
Q 010469 109 NNK-FVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-----------------------ENELAHEY 163 (510)
Q Consensus 109 ~~~-~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~~~~~~ 163 (510)
.++ +++|+|| ++||++|+.+.|.+.++++++++ .++.++.|+++. +..+++.|
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEN--DDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAY 111 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSS--SSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHT
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHH--CCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHc
Confidence 455 9999998 99999999999999999998875 358888888753 56788999
Q ss_pred CCC----ccc--EEEEEe-CC-eeeeecCCC----CHHHHHHHHHH
Q 010469 164 DVQ----GFP--TIYFFV-DG-QHKAYNGGR----TKDAIVTWIKK 197 (510)
Q Consensus 164 ~v~----~~P--~~~~~~-~g-~~~~y~g~~----~~~~l~~~i~~ 197 (510)
++. ++| +++++. +| ....+.|.. ..+.+.+.|.+
T Consensus 112 ~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 112 GVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp TCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred CCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 998 999 888885 77 445677765 34555555543
No 242
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.07 E-value=8e-11 Score=111.34 Aligned_cols=69 Identities=19% Similarity=0.394 Sum_probs=59.7
Q ss_pred CCceEEEeCcchhhHhhcc-CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 433 DGDVKIVVGNNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~-~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
.+.+..++.++|++.+..+ +++|+|+||++||++|+.+.|.+.++++.+++ ++.|++||++.+.....+
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~ 75 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG--QFILAKLDCDAEQMIAAQ 75 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS--SSEEEEEETTTCHHHHHT
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC--CeEEEEEeCccCHHHHHH
Confidence 4578899999999977643 78999999999999999999999999999986 799999999987644433
No 243
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.07 E-value=2.7e-10 Score=88.75 Aligned_cols=80 Identities=19% Similarity=0.262 Sum_probs=65.7
Q ss_pred CCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc--ccHHHHHhCCCCcccEEEEEeCCeeeeecCCCC
Q 010469 110 NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT--EENELAHEYDVQGFPTIYFFVDGQHKAYNGGRT 187 (510)
Q Consensus 110 ~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~~P~~~~~~~g~~~~y~g~~~ 187 (510)
..+.++.||++||++|+...|.|++++ . ++.+..+|.+ +++++.++++ .++|++ +.+|+.. ..|..+
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~----~---~i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~-~~~g~~ 83 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYK----D---RFILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL-MMHRVN 83 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTS----S---SSEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE-EESSCC
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhh----h---CCeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE-EecCCC
Confidence 457899999999999999999998754 2 4889999998 7889999999 999976 4577554 456688
Q ss_pred HHHHHHHHHHHcC
Q 010469 188 KDAIVTWIKKKIG 200 (510)
Q Consensus 188 ~~~l~~~i~~~~~ 200 (510)
.+.|.++|.+.+.
T Consensus 84 ~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 84 TSKLEKQLRKLSG 96 (100)
T ss_dssp HHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987653
No 244
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.07 E-value=4.3e-10 Score=99.70 Aligned_cols=90 Identities=11% Similarity=0.173 Sum_probs=74.3
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-------------------------cHHHHHh
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-------------------------ENELAHE 162 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------------------------~~~~~~~ 162 (510)
.+++++|+|| ++||++|+.+.|.+.++++++++. ++.++.|+.+. +..+++.
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 121 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR--DAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQA 121 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHH
Confidence 4789999999 999999999999999999999862 58888887753 3467888
Q ss_pred CCCC-----cccEEEEEe-CCe-eeeecCCC----CHHHHHHHHHHHcC
Q 010469 163 YDVQ-----GFPTIYFFV-DGQ-HKAYNGGR----TKDAIVTWIKKKIG 200 (510)
Q Consensus 163 ~~v~-----~~P~~~~~~-~g~-~~~y~g~~----~~~~l~~~i~~~~~ 200 (510)
|++. ++|+++++. +|+ ...+.|.. +.+.+.+.|.+...
T Consensus 122 ~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 122 AGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp HTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred hCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 9999 999999996 774 45666654 67899999988764
No 245
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.07 E-value=4.1e-11 Score=96.52 Aligned_cols=68 Identities=18% Similarity=0.390 Sum_probs=56.1
Q ss_pred CCceEEEeCcchhhHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 433 DGDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~-~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
.......+.++|++.+.+ .+++++|+||++||++|+.+.|.+.++++.+.+ +.|+.+|++.+.....+
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---v~~~~vd~d~~~~l~~~ 79 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN---VIFLEVDVDDCQDVASE 79 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT---SEEEEEETTTTHHHHHH
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHH
Confidence 344556788899998864 578999999999999999999999999998864 99999999987654443
No 246
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.07 E-value=1.3e-10 Score=92.27 Aligned_cols=67 Identities=28% Similarity=0.670 Sum_probs=57.9
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
.+.+..+++++|++.+. .+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+.....
T Consensus 3 ~~~v~~l~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~ 69 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIR-NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG--KAVFGRLNVDENQKIAD 69 (109)
T ss_dssp CCCCEECCTTTHHHHHH-HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHH
T ss_pred CCeEEEecHHHHHHHHh-cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC--CceEEEEccccCHHHHH
Confidence 35678899999998775 478999999999999999999999999999986 79999999987765443
No 247
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.04 E-value=1.7e-10 Score=97.30 Aligned_cols=68 Identities=22% Similarity=0.647 Sum_probs=59.9
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
.+.+..+++++|++.+ ..+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+.....+
T Consensus 37 ~~~v~~l~~~~~~~~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~~l~~~ 104 (148)
T 3p2a_A 37 DGEVINATAETLDKLL-QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG--KVRFVKVNTEAEPALSTR 104 (148)
T ss_dssp CCCCEECCTTTHHHHT-TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHH
T ss_pred cCCceecCHHHHHHHH-hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC--ceEEEEEECcCCHHHHHH
Confidence 5678899999999988 6678999999999999999999999999999876 699999999987654443
No 248
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.03 E-value=1.9e-10 Score=91.22 Aligned_cols=64 Identities=30% Similarity=0.616 Sum_probs=55.5
Q ss_pred ceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCcc
Q 010469 435 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHR 501 (510)
Q Consensus 435 ~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~ 501 (510)
.+..++.++|++.+ +.+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+....
T Consensus 2 ~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~ 65 (109)
T 2yzu_A 2 KPIEVTDQNFDETL-GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG--KLLVAKLDVDENPKTA 65 (109)
T ss_dssp CCEECCTTTHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHH
T ss_pred cceEccHhHHHHHh-cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--ceEEEEEECCCCHhHH
Confidence 46789999999654 5678999999999999999999999999999986 6999999998876433
No 249
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.02 E-value=1.2e-10 Score=94.70 Aligned_cols=71 Identities=24% Similarity=0.619 Sum_probs=56.2
Q ss_pred CceEEEeCcchhhHhhccCCcEEEEEeCCCCh--------------hhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcC
Q 010469 434 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCG--------------HCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH 499 (510)
Q Consensus 434 ~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~--------------~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~ 499 (510)
+.+..++.++|++.+.+.+++++|+||++||+ +|+.+.|.+.++++.+++ ++.|+++|++.+..
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~--~~~~~~vd~d~~~~ 80 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPG 80 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC---------CEEEEEETTSCTT
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC--CeEEEEEECCCCHH
Confidence 45778999999988877889999999999999 999999999999998875 69999999998876
Q ss_pred ccceeEeee
Q 010469 500 HRAKVIFDV 508 (510)
Q Consensus 500 ~~~~~~~~v 508 (510)
...+ |||
T Consensus 81 l~~~--~~v 87 (123)
T 1oaz_A 81 TAPK--YGI 87 (123)
T ss_dssp TGGG--GTC
T ss_pred HHHH--cCC
Confidence 6555 454
No 250
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.02 E-value=2.3e-10 Score=90.56 Aligned_cols=63 Identities=17% Similarity=0.324 Sum_probs=52.8
Q ss_pred eEEE-eCcchhhHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCcc
Q 010469 436 VKIV-VGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHR 501 (510)
Q Consensus 436 ~~~l-~~~~f~~~v~~-~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~ 501 (510)
+..+ +.++|++.+.+ .+++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++.+....
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~ 67 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP---QAVFLEVDVHQCQGTA 67 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHH
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC---CcEEEEEECccCHHHH
Confidence 3445 56789998864 67899999999999999999999999999883 6999999998775443
No 251
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.02 E-value=1.5e-10 Score=92.50 Aligned_cols=66 Identities=14% Similarity=0.328 Sum_probs=52.5
Q ss_pred eEEEeC-cchhhHhhc--cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 436 VKIVVG-NNFDEIVLD--ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 436 ~~~l~~-~~f~~~v~~--~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
+..++. ++|++.+.. .+++++|+||++||++|+.+.|.+.++++.+.. .++.|+.+|++.+.....
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~~~~ 70 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSN-SNVSFLSIDADENSEISE 70 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGG-TTSEEEEEETTTCHHHHH
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCC-CCEEEEEEecccCHHHHH
Confidence 566777 899988863 468999999999999999999999999998643 369999999987764433
No 252
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.02 E-value=2.6e-10 Score=94.49 Aligned_cols=63 Identities=16% Similarity=0.226 Sum_probs=55.2
Q ss_pred CCceEEEeCcchhhHhhccC--CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCc
Q 010469 433 DGDVKIVVGNNFDEIVLDES--KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE 498 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~--~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~ 498 (510)
.+.+..++.++|.+.+...+ +++||+||++||++|+.+.|.+.++++.+. ++.|+++|++.+.
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~---~v~~~~vd~~~~~ 73 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP---ETKFVKAIVNSCI 73 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS---SEEEEEECCSSSC
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC---CcEEEEEEhhcCc
Confidence 56788889999999887543 689999999999999999999999999875 5999999998764
No 253
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.02 E-value=2.9e-10 Score=92.66 Aligned_cols=60 Identities=35% Similarity=0.697 Sum_probs=54.0
Q ss_pred CCceEEEeCcchhhHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 433 DGDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~-~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
.+.+..++.++|.+.+.+ .+++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~~~~~~vd~~ 77 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL---DVIFLKLDCN 77 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC---CCEEEEEecC
Confidence 567889999999998875 57899999999999999999999999999886 4899999997
No 254
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.02 E-value=8.8e-10 Score=98.03 Aligned_cols=92 Identities=17% Similarity=0.217 Sum_probs=67.3
Q ss_pred CCCeEEEEEECCCChH-HhhhhHHHHHHHHHHhhc-CCCeEEEEEeCcc----------------------------cHH
Q 010469 109 NNKFVMVEFYAPWCGH-CQALAPEYAAAATELKSA-NESVVLAKVDATE----------------------------ENE 158 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~-C~~~~p~~~~~~~~~~~~-~~~v~~~~vd~~~----------------------------~~~ 158 (510)
.++++||+||++||++ |+.++|.|.++.+++... +.++.++.|+++. ...
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 5789999999999998 999999999999988753 2357777777652 124
Q ss_pred HHHhCCCC-ccc---------------EEEEEe-CCe-eeeecCCCCHHHHHHHHHHHcC
Q 010469 159 LAHEYDVQ-GFP---------------TIYFFV-DGQ-HKAYNGGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 159 ~~~~~~v~-~~P---------------~~~~~~-~g~-~~~y~g~~~~~~l~~~i~~~~~ 200 (510)
+++.|+|. +.| +++++. +|+ ...+.|..+.+.+.+.|.+.+.
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVK 179 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHH
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 67788886 444 677775 774 4567787777777777776653
No 255
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.01 E-value=2.5e-09 Score=95.68 Aligned_cols=103 Identities=17% Similarity=0.119 Sum_probs=74.8
Q ss_pred cEEeC-hhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-----------cHHHHH-
Q 010469 95 VVVLK-ERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-----------ENELAH- 161 (510)
Q Consensus 95 v~~l~-~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-----------~~~~~~- 161 (510)
+..++ ++.+...--.++++||+|||+||++|+ ++|.|.++++++++. ++.++.|+|+. -.++++
T Consensus 40 l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~--g~~Vlgvs~d~f~~~e~~~~~~i~~f~~~ 116 (215)
T 2i3y_A 40 AIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPY--GLVVLGFPCNQFGKQEPGDNKEILPGLKY 116 (215)
T ss_dssp EEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred eeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccC--CeEEEEEEccccCcCCCCCHHHHHHHHHh
Confidence 44444 444433223689999999999999999 999999999999873 58999998752 123555
Q ss_pred -----hCCCC-------------------------------------------------cccEEEEEe-CCe-eeeecCC
Q 010469 162 -----EYDVQ-------------------------------------------------GFPTIYFFV-DGQ-HKAYNGG 185 (510)
Q Consensus 162 -----~~~v~-------------------------------------------------~~P~~~~~~-~g~-~~~y~g~ 185 (510)
++++. ..|++++++ +|+ ..+|.|.
T Consensus 117 ~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~~~g~ 196 (215)
T 2i3y_A 117 VRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHR 196 (215)
T ss_dssp TSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTT
T ss_pred ccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEEeCCC
Confidence 55431 016888885 774 4678888
Q ss_pred CCHHHHHHHHHHHcC
Q 010469 186 RTKDAIVTWIKKKIG 200 (510)
Q Consensus 186 ~~~~~l~~~i~~~~~ 200 (510)
.+.+.+.+.|.+.+.
T Consensus 197 ~~~~~l~~~I~~ll~ 211 (215)
T 2i3y_A 197 ATVSSVKTDILAYLK 211 (215)
T ss_dssp SCHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHH
Confidence 899999998888763
No 256
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.01 E-value=2.2e-10 Score=92.56 Aligned_cols=64 Identities=19% Similarity=0.379 Sum_probs=53.7
Q ss_pred ceEEE--eCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCcc
Q 010469 435 DVKIV--VGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHR 501 (510)
Q Consensus 435 ~~~~l--~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~ 501 (510)
.+..+ +..+|.+.+.+++++++|+||++||++|+.+.|.+.++++.+ + ++.|+.+|++.+....
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~--~v~~~~vd~~~~~~~~ 69 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-K--DVTFIKVDVDKNGNAA 69 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T--TSEEEEEETTTCHHHH
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C--CeEEEEEECCCCHHHH
Confidence 45667 456888777777889999999999999999999999999988 3 7999999999875443
No 257
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.01 E-value=2.3e-10 Score=93.61 Aligned_cols=67 Identities=30% Similarity=0.656 Sum_probs=56.0
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
.+.+..++.++|++.+.. .++|+||++||++|+.+.|.+.++++.+.+ .++.|+.+|++.+.....+
T Consensus 6 ~~~v~~l~~~~f~~~~~~---~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~-~~v~~~~vd~~~~~~~~~~ 72 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG---DWMIEFYAPWCPACQNLQPEWESFAEWGED-LEVNIAKVDVTEQPGLSGR 72 (126)
T ss_dssp CCSEEECCTTTHHHHTSS---EEEEEEECSSCHHHHHHHHHHHHHHHHHGG-GTCEEEEEETTTCHHHHHH
T ss_pred CCccEEecHHHHHHHhCC---CEEEEEECCCCHHHHHHhHHHHHHHHHhcc-CCeEEEEEECcCCHHHHHH
Confidence 567889999999987643 399999999999999999999999998864 3699999999987654433
No 258
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.00 E-value=2.3e-10 Score=93.38 Aligned_cols=64 Identities=27% Similarity=0.447 Sum_probs=55.7
Q ss_pred ceEEEeC-cchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 435 DVKIVVG-NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 435 ~~~~l~~-~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
-+..++. ++|++.+ ..+++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++.+.....
T Consensus 20 mv~~l~~~~~f~~~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~d~~~~l~~ 84 (125)
T 1r26_A 20 SVVDVYSVEQFRNIM-SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP---TVKFAKVDADNNSEIVS 84 (125)
T ss_dssp CCEEECCHHHHHHHH-HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT---TSEEEEEETTTCHHHHH
T ss_pred ceEECCCHHHHHHHH-ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCHHHHH
Confidence 3788998 9999988 667899999999999999999999999999884 59999999987764443
No 259
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.99 E-value=1.9e-09 Score=95.71 Aligned_cols=89 Identities=13% Similarity=0.268 Sum_probs=71.2
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc----------------------------cHHH
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~~ 159 (510)
.+++++|+|| ++||++|+.+.|.|.++++++++ .++.++.|+++. ..++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~--~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~ 110 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRK--LGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRL 110 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT--TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHH
Confidence 5789999999 99999999999999999999986 358888888763 2367
Q ss_pred HHhCCCC------cccEEEEEe-CCe-eeeecCC----CCHHHHHHHHHHHc
Q 010469 160 AHEYDVQ------GFPTIYFFV-DGQ-HKAYNGG----RTKDAIVTWIKKKI 199 (510)
Q Consensus 160 ~~~~~v~------~~P~~~~~~-~g~-~~~y~g~----~~~~~l~~~i~~~~ 199 (510)
++.|++. .+|+++++. +|+ ...+.|. .+.+.+.+.|....
T Consensus 111 ~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 111 SEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 8889998 799999995 774 3455553 45688888887653
No 260
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.98 E-value=2.3e-10 Score=90.99 Aligned_cols=66 Identities=23% Similarity=0.456 Sum_probs=54.0
Q ss_pred CceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 434 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 434 ~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
+.....+.++|++.+. .+++++|+||++||++|+.+.|.+.++++.+.+ +.|+.+|++.+.....+
T Consensus 7 ~~~~~~~~~~f~~~~~-~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~---~~~~~vd~~~~~~l~~~ 72 (109)
T 3f3q_A 7 MVTQFKTASEFDSAIA-QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ---ADFYKLDVDELGDVAQK 72 (109)
T ss_dssp CCEECCSHHHHHHHTT-SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHH
T ss_pred cccCCCCHHHHHHHHh-cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHH
Confidence 3445567778988774 478999999999999999999999999998864 89999999877654433
No 261
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.97 E-value=2.3e-09 Score=109.91 Aligned_cols=96 Identities=16% Similarity=0.275 Sum_probs=80.4
Q ss_pred EEeChhcHHHHHh-CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEEE
Q 010469 96 VVLKERNFSDVIE-NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYFF 174 (510)
Q Consensus 96 ~~l~~~~~~~~~~-~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~~ 174 (510)
..++++.++.+.. .+++.++.||++||++|+.+.|.+++++..+. ++.+..+|.++.++++++|+|.++|++++
T Consensus 102 ~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~----~v~~~~vd~~~~~~~~~~~~i~svPt~~i- 176 (521)
T 1hyu_A 102 SKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP----RIKHTAIDGGTFQNEITERNVMGVPAVFV- 176 (521)
T ss_dssp CCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT----TEEEEEEETTTCHHHHHHTTCCSSSEEEE-
T ss_pred CCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC----ceEEEEEechhhHHHHHHhCCCccCEEEE-
Confidence 3466777777654 35677999999999999999999999988763 59999999999999999999999999977
Q ss_pred eCCeeeeecCCCCHHHHHHHHHHH
Q 010469 175 VDGQHKAYNGGRTKDAIVTWIKKK 198 (510)
Q Consensus 175 ~~g~~~~y~g~~~~~~l~~~i~~~ 198 (510)
+|+.. ..|..+.+.+.+|+...
T Consensus 177 -~g~~~-~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 177 -NGKEF-GQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp -TTEEE-EESCCCHHHHHHHHCCS
T ss_pred -CCEEE-ecCCCCHHHHHHHHhhc
Confidence 88654 34999999999998653
No 262
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.97 E-value=4.6e-10 Score=88.53 Aligned_cols=64 Identities=27% Similarity=0.535 Sum_probs=54.1
Q ss_pred eEEEeC-cchhhHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCcc
Q 010469 436 VKIVVG-NNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHR 501 (510)
Q Consensus 436 ~~~l~~-~~f~~~v~~-~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~ 501 (510)
+..++. ++|++.+.+ .+++++|+||++||++|+.+.|.+.++++.+++ ++.|+.+|++.+....
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~ 67 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD--NVVVLKVDVDECEDIA 67 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHH
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC--CeEEEEEeccchHHHH
Confidence 345666 789888865 678999999999999999999999999999864 7999999998775433
No 263
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.97 E-value=3.8e-10 Score=91.25 Aligned_cols=70 Identities=37% Similarity=0.723 Sum_probs=58.9
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-CcEEEEEEeCCCCcCccce
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~-~~~~~~~id~~~n~~~~~~ 503 (510)
.+.+..++.++|++.+. .+++++|+||++||++|+.+.|.+.++++.++.. .++.|+.+|++.+.....+
T Consensus 6 ~~~v~~l~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~ 76 (120)
T 1mek_A 6 EDHVLVLRKSNFAEALA-AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQ 76 (120)
T ss_dssp ETTEEECCTTTHHHHHH-HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHH
T ss_pred CCCcEEechhhHHHHHc-cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHH
Confidence 45688899999998764 5789999999999999999999999999988653 3699999999887654433
No 264
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.96 E-value=4.1e-10 Score=89.92 Aligned_cols=67 Identities=21% Similarity=0.550 Sum_probs=55.5
Q ss_pred CceEEE-eCcchhhHhhc-c--CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 434 GDVKIV-VGNNFDEIVLD-E--SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 434 ~~~~~l-~~~~f~~~v~~-~--~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
+.+..+ +.++|++.+.. . +++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+.....
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~ 72 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG--KVIFLKVDVDAVAAVAE 72 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTTHHHHH
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CeEEEEEECCchHHHHH
Confidence 346667 45789988864 3 78999999999999999999999999999875 79999999987754433
No 265
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.96 E-value=2.1e-09 Score=93.25 Aligned_cols=92 Identities=21% Similarity=0.319 Sum_probs=70.0
Q ss_pred CCCeEEEEEECCCCh-HHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc---cH-------------------------HH
Q 010469 109 NNKFVMVEFYAPWCG-HCQALAPEYAAAATELKSANESVVLAKVDATE---EN-------------------------EL 159 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~-~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~---~~-------------------------~~ 159 (510)
.+++++|+||++||+ +|+...|.+.++++++++.+.++.++.|+++. .+ .+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 578999999999999 99999999999999998754358888888752 11 11
Q ss_pred HHh----------------CCCCcccEEEEEe-CCee-eeecCCC--CHHHHHHHHHHHcC
Q 010469 160 AHE----------------YDVQGFPTIYFFV-DGQH-KAYNGGR--TKDAIVTWIKKKIG 200 (510)
Q Consensus 160 ~~~----------------~~v~~~P~~~~~~-~g~~-~~y~g~~--~~~~l~~~i~~~~~ 200 (510)
.+. +++...|+++++. +|++ ..+.|.. +.+.+.+.|++.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 111 2356689999995 7744 5677876 47899999987764
No 266
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.96 E-value=4.5e-10 Score=88.15 Aligned_cols=62 Identities=21% Similarity=0.483 Sum_probs=53.8
Q ss_pred eEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCcc
Q 010469 436 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHR 501 (510)
Q Consensus 436 ~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~ 501 (510)
|..++.++|++.+ ..+++++|+||++||++|+.+.|.+.++++.+.+ +.|+.+|++.+....
T Consensus 1 V~~l~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~ 62 (104)
T 2e0q_A 1 VIHLDSKNFDSFL-ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ---VGFGKLNSDENPDIA 62 (104)
T ss_dssp CEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHH
T ss_pred CeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC---ceEEEEECCCCHHHH
Confidence 3568889999988 5678999999999999999999999999998864 999999998776433
No 267
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.95 E-value=1.4e-09 Score=98.22 Aligned_cols=89 Identities=13% Similarity=0.302 Sum_probs=71.3
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc----------------------------cHHH
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~~ 159 (510)
.+++++|+|| ++||++|+.+.|.|.++++++++ .++.++.|+++. ...+
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i 132 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHD--VNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQI 132 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHH--TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHH
Confidence 4689999999 99999999999999999999987 358888887653 2467
Q ss_pred HHhCCCC------cccEEEEEe-CCee-eeecCC----CCHHHHHHHHHHHc
Q 010469 160 AHEYDVQ------GFPTIYFFV-DGQH-KAYNGG----RTKDAIVTWIKKKI 199 (510)
Q Consensus 160 ~~~~~v~------~~P~~~~~~-~g~~-~~y~g~----~~~~~l~~~i~~~~ 199 (510)
++.|++. .+|++++++ +|++ ..+.|. .+.+++.+.|+...
T Consensus 133 ~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 133 SRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 8899998 999999995 7743 444554 45688888887655
No 268
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.95 E-value=2.1e-09 Score=80.98 Aligned_cols=75 Identities=27% Similarity=0.416 Sum_probs=59.8
Q ss_pred EEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccH----HHHHhCC--CCcccEEEEEeCCeeeeecCCCC
Q 010469 114 MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEEN----ELAHEYD--VQGFPTIYFFVDGQHKAYNGGRT 187 (510)
Q Consensus 114 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~----~~~~~~~--v~~~P~~~~~~~g~~~~y~g~~~ 187 (510)
++.||++||++|+...+.|++++.++. ++.+..+|.++++ ++.++++ +.++|++ |.+|+.+. |
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~----~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i~--~--- 71 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD----DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHIG--G--- 71 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS----SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEEE--S---
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC----CceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEEE--C---
Confidence 778999999999999999999988754 3889999987654 7888998 9999998 44775432 2
Q ss_pred HHHHHHHHHHHc
Q 010469 188 KDAIVTWIKKKI 199 (510)
Q Consensus 188 ~~~l~~~i~~~~ 199 (510)
.+.+.+++.+.+
T Consensus 72 ~~~l~~~~~~~~ 83 (85)
T 1ego_A 72 YTDFAAWVKENL 83 (85)
T ss_dssp SHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 367888877654
No 269
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.94 E-value=2.7e-09 Score=95.06 Aligned_cols=89 Identities=11% Similarity=0.219 Sum_probs=71.1
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc----------------------------cHHH
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~~ 159 (510)
.+++++|+|| ++||++|+.+.|.+.++++++++ .++.++.|+++. ..++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~--~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~ 112 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSD--IGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCI 112 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHT--TTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHH--CCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHH
Confidence 4789999999 99999999999999999999976 358888888753 3467
Q ss_pred HHhCCCC------cccEEEEEe-CCee-eeecCC----CCHHHHHHHHHHHc
Q 010469 160 AHEYDVQ------GFPTIYFFV-DGQH-KAYNGG----RTKDAIVTWIKKKI 199 (510)
Q Consensus 160 ~~~~~v~------~~P~~~~~~-~g~~-~~y~g~----~~~~~l~~~i~~~~ 199 (510)
++.|++. ++|++++++ +|++ ..+.|. .+.+.+.+.|+...
T Consensus 113 ~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 113 MKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 8889999 999999995 7743 445453 35688888887654
No 270
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.94 E-value=3.4e-09 Score=95.03 Aligned_cols=89 Identities=17% Similarity=0.288 Sum_probs=70.3
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc----------------------------cHHH
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~~ 159 (510)
.+++++|+|| ++||++|+.+.|.|.++++++++ .++.++.|+++. ..++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 128 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHE--RNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSI 128 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHH--TTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHH
Confidence 5789999999 99999999999999999999986 357788877653 2467
Q ss_pred HHhCCCC-----cccEEEEEe-CCee-eeecCC----CCHHHHHHHHHHHc
Q 010469 160 AHEYDVQ-----GFPTIYFFV-DGQH-KAYNGG----RTKDAIVTWIKKKI 199 (510)
Q Consensus 160 ~~~~~v~-----~~P~~~~~~-~g~~-~~y~g~----~~~~~l~~~i~~~~ 199 (510)
++.|++. .+|++++++ +|++ ..+.|. .+.+.+.+.|....
T Consensus 129 ~~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 129 SKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 8889998 899999996 7733 445443 34788888877654
No 271
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.94 E-value=4.9e-10 Score=91.03 Aligned_cols=67 Identities=21% Similarity=0.417 Sum_probs=56.7
Q ss_pred CCceEEEeCcchhhHhhc---cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 433 DGDVKIVVGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~---~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
...+..++.++|++.+.. .+++++|+||++||++|+.+.|.+.++++.+.+ +.|+.+|++.+.....
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~vd~~~~~~~~~ 81 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN---AVFLKVDVDELKPIAE 81 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHH
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---cEEEEEECCCCHHHHH
Confidence 345667788899998876 578999999999999999999999999998864 9999999987764433
No 272
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.94 E-value=6.1e-09 Score=89.65 Aligned_cols=99 Identities=13% Similarity=0.143 Sum_probs=71.0
Q ss_pred EeChhcHHHHHhCCCeEEEEEECCC-ChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc--------------------
Q 010469 97 VLKERNFSDVIENNKFVMVEFYAPW-CGHCQALAPEYAAAATELKSANESVVLAKVDATE-------------------- 155 (510)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~v~f~a~w-C~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------------------- 155 (510)
.++++.+...--.+++++|+||++| |++|+.+.|.+.++++++ . ++.++.|+.+.
T Consensus 31 ~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~---~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~ 106 (167)
T 2jsy_A 31 TNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G---DVNVYTISADLPFAQARWCGANGIDKVETLS 106 (167)
T ss_dssp BTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S---SCEEEEEECSSGGGTSCCGGGSSCTTEEEEE
T ss_pred CCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C---CCEEEEEECCCHHHHHHHHHhcCCCCceEee
Confidence 3444443322225789999999999 999999999999999999 3 57777777652
Q ss_pred ---cHHHHHhCCCCc------ccEEEEEe-CCe-eeeecCC-----CCHHHHHHHHHHHc
Q 010469 156 ---ENELAHEYDVQG------FPTIYFFV-DGQ-HKAYNGG-----RTKDAIVTWIKKKI 199 (510)
Q Consensus 156 ---~~~~~~~~~v~~------~P~~~~~~-~g~-~~~y~g~-----~~~~~l~~~i~~~~ 199 (510)
+.++++.|++.. .|++++++ +|+ ...+.|. .+.+.+.+.|++.+
T Consensus 107 d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 107 DHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp GGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred CCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 245777888876 49999996 774 4455542 24477877777654
No 273
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.94 E-value=7.9e-10 Score=90.07 Aligned_cols=67 Identities=24% Similarity=0.510 Sum_probs=56.4
Q ss_pred CCceEEE-eCcchhhHhhc---cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 433 DGDVKIV-VGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 433 ~~~~~~l-~~~~f~~~v~~---~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
.+.+..+ +.++|++.+.. .+++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++.+.....
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~vd~d~~~~l~~ 85 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP---NVLFLKVDTDELKSVAS 85 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTSHHHHH
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CcEEEEEECccCHHHHH
Confidence 5667777 66799988865 47899999999999999999999999999885 59999999987754433
No 274
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.93 E-value=5.3e-10 Score=93.32 Aligned_cols=65 Identities=23% Similarity=0.469 Sum_probs=43.5
Q ss_pred CceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCcc
Q 010469 434 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHR 501 (510)
Q Consensus 434 ~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~ 501 (510)
+.+..+++++|.+.+.+.++ ++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+....
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~ 97 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAG--RLKVVKVNVDEHPGLA 97 (140)
T ss_dssp ----------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHH
T ss_pred CccccCCHHHHHHHHHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCCCHHHH
Confidence 66788999999998877767 99999999999999999999999999876 6999999998875433
No 275
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.93 E-value=2.7e-09 Score=94.27 Aligned_cols=89 Identities=20% Similarity=0.305 Sum_probs=70.3
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc----------------------------cHHH
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~~ 159 (510)
.+++++|+|| ++||++|+.+.|.|.++++++++ .++.++.|+++. +..+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~--~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 107 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKE--RNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSI 107 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHH--TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHH
Confidence 5789999999 99999999999999999999976 358888887653 2367
Q ss_pred HHhCCCC-----cccEEEEEe-CCee-eeecCC----CCHHHHHHHHHHHc
Q 010469 160 AHEYDVQ-----GFPTIYFFV-DGQH-KAYNGG----RTKDAIVTWIKKKI 199 (510)
Q Consensus 160 ~~~~~v~-----~~P~~~~~~-~g~~-~~y~g~----~~~~~l~~~i~~~~ 199 (510)
++.|++. .+|++++++ +|+. ..+.|. .+.+.+.+.|....
T Consensus 108 ~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 108 ARSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HHHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HHHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 8889999 899999995 7743 455553 34677777776554
No 276
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.92 E-value=5.5e-10 Score=89.99 Aligned_cols=64 Identities=19% Similarity=0.544 Sum_probs=54.2
Q ss_pred ceEEEeC-cchhhHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 435 DVKIVVG-NNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 435 ~~~~l~~-~~f~~~v~~-~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
.+..++. ++|.+.+.+ .+++++|+||++||++|+.+.|.+.++++.+ ++.|+.+|++.+.....
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~----~~~~~~vd~~~~~~~~~ 79 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY----DAIFVKVDVDKLEETAR 79 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS----SSEEEEEETTTSHHHHH
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc----CcEEEEEECCccHHHHH
Confidence 3677887 899998875 5789999999999999999999999998876 58999999987754433
No 277
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.92 E-value=4.2e-09 Score=93.75 Aligned_cols=88 Identities=15% Similarity=0.076 Sum_probs=67.7
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-----------cHHHHH------hCCCC-----
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-----------ENELAH------EYDVQ----- 166 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-----------~~~~~~------~~~v~----- 166 (510)
.++++||+|||+||++| .++|.|.++++++++. ++.++.|+|+. -.++++ ++++.
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~--g~~vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fp~l~ 113 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPF--GLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFE 113 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG--TEEEEEEECCCBTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC--CEEEEEEECcccCcCCCCCHHHHHHHHHhcchhhccCccceeee
Confidence 68899999999999999 7899999999999873 58888888642 123455 44431
Q ss_pred --------------------------------------------cccEEEEEe-CCe-eeeecCCCCHHHHHHHHHHHc
Q 010469 167 --------------------------------------------GFPTIYFFV-DGQ-HKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 167 --------------------------------------------~~P~~~~~~-~g~-~~~y~g~~~~~~l~~~i~~~~ 199 (510)
..|++++++ +|+ ..+|.|..+.+.+...|.+.+
T Consensus 114 d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~~~g~~~~~~l~~~I~~ll 192 (207)
T 2r37_A 114 KGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYM 192 (207)
T ss_dssp CCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHH
T ss_pred EeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 016888885 784 467888888899988888776
No 278
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.91 E-value=4.1e-10 Score=90.26 Aligned_cols=66 Identities=17% Similarity=0.419 Sum_probs=51.2
Q ss_pred CceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 434 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 434 ~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
+.+..++..++-+.+.+.+++++|+||++||++|+.+.|.+.++++.+.+ +.|+.+|++.+.....
T Consensus 12 ~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~---v~~~~vd~~~~~~l~~ 77 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD---VRFVKCDVDESPDIAK 77 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT---SEEEEEETTTCHHHHH
T ss_pred hheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHH
Confidence 34445555444334455678999999999999999999999999998864 9999999988764433
No 279
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.91 E-value=6.4e-10 Score=99.80 Aligned_cols=67 Identities=22% Similarity=0.500 Sum_probs=58.6
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
...+..+++.+|+..+ ..++++||+||++||++|+.+.|.+.++++.+++ ++.|+.+|++.+.....
T Consensus 96 ~~~v~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~--~v~~~~vd~~~~~~l~~ 162 (210)
T 3apq_A 96 DPEIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG--LLRIGAVNCGDDRMLCR 162 (210)
T ss_dssp CTTSEECCHHHHHHHH-HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHH
T ss_pred CCceEEecHHHHHHHH-ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC--ceEEEEEECCccHHHHH
Confidence 4567889999999988 5678999999999999999999999999999976 79999999988764433
No 280
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.90 E-value=5e-09 Score=89.82 Aligned_cols=88 Identities=17% Similarity=0.326 Sum_probs=65.7
Q ss_pred CCCeEEEEEEC-CCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc---------------------cHHHHHhCCCC
Q 010469 109 NNKFVMVEFYA-PWCGHCQALAPEYAAAATELKSANESVVLAKVDATE---------------------ENELAHEYDVQ 166 (510)
Q Consensus 109 ~~~~~~v~f~a-~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~---------------------~~~~~~~~~v~ 166 (510)
.+++++|+||+ +||++|+.++|.+.++.+++++. ++.++.|.++. ...+++.|++.
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 111 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA--GAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVI 111 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCc
Confidence 56799999998 99999999999999999999873 47777777652 12567778887
Q ss_pred c------------ccEEEEEe-CCee-eeecCCCC---HHHHHHHHHHH
Q 010469 167 G------------FPTIYFFV-DGQH-KAYNGGRT---KDAIVTWIKKK 198 (510)
Q Consensus 167 ~------------~P~~~~~~-~g~~-~~y~g~~~---~~~l~~~i~~~ 198 (510)
. .|++++++ +|++ ..+.|... .+.+.+.+++.
T Consensus 112 ~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 112 KEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred cccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 6 89999996 7743 45544333 35555555543
No 281
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.90 E-value=5.3e-10 Score=91.72 Aligned_cols=59 Identities=27% Similarity=0.370 Sum_probs=48.8
Q ss_pred chhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 443 NFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 443 ~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
++.+.+...+++++|+||++||++|+.+.|.+.++++.+++ ++.|+.+|++.+.....+
T Consensus 33 ~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~vd~d~~~~l~~~ 91 (128)
T 3ul3_B 33 NIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK--RIYLLKVDLDKNESLARK 91 (128)
T ss_dssp SSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG--GEEEEEEEGGGCHHHHHH
T ss_pred cHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHH
Confidence 33344455688999999999999999999999999999975 799999999887654443
No 282
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.89 E-value=1.1e-09 Score=111.24 Aligned_cols=76 Identities=24% Similarity=0.507 Sum_probs=63.7
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CCcEEEEEEeCCCCcCccceeEeee
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG-VDSIVIAKMDGTTNEHHRAKVIFDV 508 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~-~~~~~~~~id~~~n~~~~~~~~~~v 508 (510)
...|..+++++|+..+.+++++++|+|||+||++|+.+.|.+.++++.+++ ...+.|+.||++.++..+.+.+|||
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V 87 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNI 87 (519)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTC
T ss_pred CCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCC
Confidence 567899999999999988889999999999999999999999999999875 3479999999976444444434555
No 283
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.89 E-value=8.8e-09 Score=93.05 Aligned_cols=87 Identities=15% Similarity=0.331 Sum_probs=67.3
Q ss_pred CCCeEEEEEEC-CCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc----------------------------cHHH
Q 010469 109 NNKFVMVEFYA-PWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (510)
Q Consensus 109 ~~~~~~v~f~a-~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~~ 159 (510)
.++++||+||+ +||++|+.+.|.|.++++++++. ++.++.|+++. +..+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~--~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 145 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR--NCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEI 145 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHH
Confidence 57899999997 99999999999999999999863 58888887763 2256
Q ss_pred HHhCCCC------cccEEEEEe-CCee-eeecCCC----CHHHHHHHHHH
Q 010469 160 AHEYDVQ------GFPTIYFFV-DGQH-KAYNGGR----TKDAIVTWIKK 197 (510)
Q Consensus 160 ~~~~~v~------~~P~~~~~~-~g~~-~~y~g~~----~~~~l~~~i~~ 197 (510)
++.|++. .+|++++++ +|++ ..+.|.. ..+.+.+.|..
T Consensus 146 ~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 146 SKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HHHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HHHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 7889998 899999996 7743 4555542 34666666554
No 284
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.89 E-value=9e-10 Score=87.94 Aligned_cols=65 Identities=23% Similarity=0.503 Sum_probs=55.0
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCcc
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHR 501 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~ 501 (510)
......++..+|++.+. .+++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++.+....
T Consensus 8 ~~~~~~~~~~~f~~~~~-~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~---~v~~~~vd~~~~~~~~ 72 (112)
T 1syr_A 8 HMVKIVTSQAEFDSIIS-QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT---KMVFIKVDVDEVSEVT 72 (112)
T ss_dssp -CCEEECSHHHHHHHHH-HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTTHHHH
T ss_pred eeEEEECCHHHHHHHHc-cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC---CCEEEEEECCCCHHHH
Confidence 34567788899999874 67899999999999999999999999999875 4999999998776433
No 285
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.89 E-value=1.1e-09 Score=85.93 Aligned_cols=62 Identities=23% Similarity=0.642 Sum_probs=51.9
Q ss_pred EEEeC-cchhhHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCcc
Q 010469 437 KIVVG-NNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHR 501 (510)
Q Consensus 437 ~~l~~-~~f~~~v~~-~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~ 501 (510)
..++. ++|++.+.+ .+++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++.+....
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~ 65 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP---EVEFAKVDVDQNEEAA 65 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCHHHH
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC---CCEEEEEeccCCHHHH
Confidence 34555 788888865 57899999999999999999999999999875 5999999998775433
No 286
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.88 E-value=1.4e-09 Score=90.51 Aligned_cols=68 Identities=24% Similarity=0.475 Sum_probs=55.6
Q ss_pred CCceEEEe-CcchhhHhh---ccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 433 DGDVKIVV-GNNFDEIVL---DESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 433 ~~~~~~l~-~~~f~~~v~---~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
.+.+..++ .++|.+.+. ..+++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++.+.....+
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~v~~~~~~~~~~~ 94 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP---SLMFLVIDVDELSDFSAS 94 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHH
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEeCcccHHHHHH
Confidence 45566665 689998875 347899999999999999999999999999884 599999999877544433
No 287
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.88 E-value=1.2e-09 Score=92.55 Aligned_cols=67 Identities=19% Similarity=0.394 Sum_probs=55.3
Q ss_pred CCceEEEe-CcchhhHhhcc-CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 433 DGDVKIVV-GNNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 433 ~~~~~~l~-~~~f~~~v~~~-~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
.+.+..++ .++|++.+.+. ++++||+||++||++|+.+.|.+.++++.+. ++.|+.+|++.+.....
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~~~~~~l~~ 79 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP---QVSFVKLEAEGVPEVSE 79 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHH
T ss_pred cCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC---CeEEEEEECCCCHHHHH
Confidence 45677776 47898877654 7899999999999999999999999999874 69999999998764443
No 288
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.87 E-value=5.9e-08 Score=88.88 Aligned_cols=143 Identities=12% Similarity=0.117 Sum_probs=87.3
Q ss_pred CCCeEEEEEE-CCCChHHh-hhhHHHHHHHHHHhhcCCCe-EEEEEeCccc----------------------HHHHHhC
Q 010469 109 NNKFVMVEFY-APWCGHCQ-ALAPEYAAAATELKSANESV-VLAKVDATEE----------------------NELAHEY 163 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~-~~~p~~~~~~~~~~~~~~~v-~~~~vd~~~~----------------------~~~~~~~ 163 (510)
.+++++|+|| ++||++|+ .++|.|.++++++++. ++ .++.|+.+.. ..+++.|
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 109 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY--GVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGM 109 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT--TCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHh
Confidence 5789999999 99999999 9999999999999873 47 7777765431 2466778
Q ss_pred CCC-----------cccEEEEEeCCee-eeecCC---------CCHHHHHHHHHHHcCCCcccccchhHHHHhccCCCeE
Q 010469 164 DVQ-----------GFPTIYFFVDGQH-KAYNGG---------RTKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKV 222 (510)
Q Consensus 164 ~v~-----------~~P~~~~~~~g~~-~~y~g~---------~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~ 222 (510)
|+. ..|+++++++|++ ..+.|. .+.+.+.+.+.... + ....
T Consensus 110 gv~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~~~----------------i--~~~~ 171 (241)
T 1nm3_A 110 GMLVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAPQH----------------Q--VQES 171 (241)
T ss_dssp TCEEECTTTTCCEEECCEEEEEETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCTTS----------------C--CCCC
T ss_pred CceeecccccCcccceeEEEEEECCEEEEEEEeccCCCccceecCHHHHHHHhhhhc----------------c--ccce
Confidence 775 3588887788843 455554 24455544443211 1 1123
Q ss_pred EEEEecCCCCcchHHHHHhccccCceeEEEcCC----hhHHHhhCCCCCCCCCeEE
Q 010469 223 VLGYLNSLVGSESEVLADASRLEDDVNFYQTTN----PDVAKIFHLDSKVNRPALV 274 (510)
Q Consensus 223 ~v~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~----~~l~~~~~~~~~~~~p~l~ 274 (510)
+++|....+......-..+....-.+....+.. .++.+.+|... .|.++
T Consensus 172 i~ly~~~~Cp~C~~a~~~L~~~~i~~~~~~i~~~~~~~~l~~~~g~~~---vP~~~ 224 (241)
T 1nm3_A 172 ISIFTKPGCPFCAKAKQLLHDKGLSFEEIILGHDATIVSVRAVSGRTT---VPQVF 224 (241)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHTCCCEEEETTTTCCHHHHHHHTCCSS---SCEEE
T ss_pred EEEEECCCChHHHHHHHHHHHcCCceEEEECCCchHHHHHHHHhCCCC---cCEEE
Confidence 555655656444443333333333333333322 34666666543 68775
No 289
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.38 E-value=2.3e-10 Score=90.23 Aligned_cols=69 Identities=33% Similarity=0.713 Sum_probs=58.4
Q ss_pred eEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccceeEeee
Q 010469 436 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKVIFDV 508 (510)
Q Consensus 436 ~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~~~~~v 508 (510)
+..++.++|.+.+.+.+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+.....+ |||
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~--~~v 71 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG--KVKVVKVNVDENPNTAAQ--YGI 71 (106)
Confidence 456888999988877788999999999999999999999999998875 699999999877655444 454
No 290
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.87 E-value=1.7e-09 Score=86.35 Aligned_cols=66 Identities=21% Similarity=0.454 Sum_probs=54.9
Q ss_pred CCceEEE-eCcchhhHhhc---cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCcc
Q 010469 433 DGDVKIV-VGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHR 501 (510)
Q Consensus 433 ~~~~~~l-~~~~f~~~v~~---~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~ 501 (510)
.+.+..+ +.++|++.+.. .+++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++.+....
T Consensus 3 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~ 72 (113)
T 1ti3_A 3 EGQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP---NVTFLKVDVDELKAVA 72 (113)
T ss_dssp CCCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTCHHHH
T ss_pred CCceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC---CcEEEEEEccccHHHH
Confidence 3556667 56799988865 46899999999999999999999999999875 5999999998765433
No 291
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.85 E-value=1.7e-09 Score=106.88 Aligned_cols=71 Identities=20% Similarity=0.317 Sum_probs=60.0
Q ss_pred CCceEEEeCcchhhHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCC------cEEEEEEeCCCCcCccce
Q 010469 433 DGDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVD------SIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~-~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~------~~~~~~id~~~n~~~~~~ 503 (510)
.+.+..++.++|++.+.. +.++|||+|||+||++|+.+.|.+.++++.+.+.. .+.|++||++.+.....+
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~ 99 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRK 99 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHH
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHH
Confidence 567899999999998864 35799999999999999999999999999987432 499999999988544433
No 292
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.84 E-value=5.6e-09 Score=93.90 Aligned_cols=82 Identities=17% Similarity=0.351 Sum_probs=62.2
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEe------------------------------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVD------------------------------------ 152 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd------------------------------------ 152 (510)
+++++++.||++|||+|+++.|.+.++.+. ++.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~------~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~ 158 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL------GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSV 158 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT------TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC------CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCC
Confidence 357899999999999999999999988642 23333221
Q ss_pred ----C----cccHHHHHhCCCCcccEEEEEeCCeeeeecCCCCHHHHHHHHHHHc
Q 010469 153 ----A----TEENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 153 ----~----~~~~~~~~~~~v~~~P~~~~~~~g~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
| +++..+++++||+++|++ ++.+|. .+.|..+.+.|.++|.+..
T Consensus 159 ~~~~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG~--~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 159 APASCDVDIADHYALGVQLGVSGTPAV-VLSNGT--LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCCCCSCCHHHHHHHHHHHTCCSSSEE-ECTTSC--EEESCCCHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHcCCCccCEE-EEcCCe--EecCCCCHHHHHHHHHHhh
Confidence 1 233567889999999998 556774 5679889999999987653
No 293
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.84 E-value=1.3e-08 Score=88.23 Aligned_cols=83 Identities=16% Similarity=0.234 Sum_probs=65.1
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeC-----------------------------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA----------------------------------- 153 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~----------------------------------- 153 (510)
+++++|+.||.+|||+|+.+.|.+.++.+++.+ +.+...+.
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~----v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~ 96 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN----VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSG 96 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC----EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Confidence 467899999999999999999999999887533 55444432
Q ss_pred ----------------------------------cccHHHHHhCCCCcccEEEEEeCCeeeeecCCCCHHHHHHHHHHHc
Q 010469 154 ----------------------------------TEENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 154 ----------------------------------~~~~~~~~~~~v~~~P~~~~~~~g~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
..+..+++++||.++|++++ +|+ .+.|..+.+.+.++|.+.+
T Consensus 97 ~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~--~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 97 KANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA--LVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp CCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE--EECSCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE--EeeCCCCHHHHHHHHHHHH
Confidence 12234667899999999886 674 5679999999999998765
No 294
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.84 E-value=8.8e-10 Score=91.00 Aligned_cols=67 Identities=7% Similarity=0.276 Sum_probs=53.2
Q ss_pred CCceEEEeC-cchhhHhhcc-CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 433 DGDVKIVVG-NNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 433 ~~~~~~l~~-~~f~~~v~~~-~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
.+.+..++. ++|++.+... ++++||+||++||++|+.+.|.+.++++.+ ++.|+.+|++.+.....+
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~----~v~~~~vd~~~~~~l~~~ 87 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY----YVTLVDIDVDIHPKLNDQ 87 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE----ECEEEEEETTTCHHHHHH
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc----CEEEEEEeccchHHHHHh
Confidence 455677765 7888877654 579999999999999999999999988766 489999999887654433
No 295
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.83 E-value=7.5e-09 Score=89.83 Aligned_cols=70 Identities=16% Similarity=0.209 Sum_probs=56.2
Q ss_pred CCCeEEEEEECCC-ChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc----------------------cHHHHHhCCC
Q 010469 109 NNKFVMVEFYAPW-CGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------ENELAHEYDV 165 (510)
Q Consensus 109 ~~~~~~v~f~a~w-C~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------~~~~~~~~~v 165 (510)
.+++++|+||++| |++|+.+.|.|.+++++ . ++.++.|+.+. +..+++.|++
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~---~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 117 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--S---GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGV 117 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--T---TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTC
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--c---CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCC
Confidence 5789999999999 99999999999999987 3 47888887752 2457788998
Q ss_pred Ccc---------cEEEEEe-CCee-eeec
Q 010469 166 QGF---------PTIYFFV-DGQH-KAYN 183 (510)
Q Consensus 166 ~~~---------P~~~~~~-~g~~-~~y~ 183 (510)
... |++++++ +|++ ..+.
T Consensus 118 ~~~~~~~~g~~~p~~~lid~~G~I~~~~~ 146 (175)
T 1xvq_A 118 TIADGPMAGLLARAIVVIGADGNVAYTEL 146 (175)
T ss_dssp BBCSSTTTTSBCSEEEEECTTSBEEEEEE
T ss_pred cccccccCCcccceEEEECCCCeEEEEEE
Confidence 877 8999996 7744 4554
No 296
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.83 E-value=2.5e-09 Score=86.90 Aligned_cols=58 Identities=21% Similarity=0.338 Sum_probs=50.9
Q ss_pred eEEEeCcchhhHhhc-cCCcEEEEEeCC-------CChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 436 VKIVVGNNFDEIVLD-ESKDVLLEIYAP-------WCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 436 ~~~l~~~~f~~~v~~-~~~~vlv~f~~~-------~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
+...+.++|.+.+.. .+++++|+||++ ||++|+.+.|.+.++++.+.+ ++.|+.+|++
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~ 72 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE--GCVFIYCQVG 72 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT--TEEEEEEECC
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC--CcEEEEEECC
Confidence 455677889988876 578999999999 999999999999999998865 7999999993
No 297
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.83 E-value=3.2e-10 Score=94.01 Aligned_cols=56 Identities=21% Similarity=0.427 Sum_probs=49.5
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
++.+..++.++|++.+.. +++|+||++||++|+.+.|.+.++++.++ +.|+.+|++
T Consensus 15 ~~~v~~l~~~~~~~~~~~---~vlv~F~a~wC~~C~~~~p~l~~l~~~~~----v~~~~vd~~ 70 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG---DAILAVYSKTCPHCHRDWPQLIQASKEVD----VPIVMFIWG 70 (135)
T ss_dssp TTEEEECCHHHHHHHHTS---SEEEEEEETTCHHHHHHHHHHHHHHTTCC----SCEEEEEEC
T ss_pred cCceeecCHHHHHHHhCC---cEEEEEECCcCHhhhHhChhHHHHHHHCC----CEEEEEECC
Confidence 567788999999998854 99999999999999999999999998774 788999984
No 298
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.82 E-value=1.4e-08 Score=91.40 Aligned_cols=89 Identities=15% Similarity=0.308 Sum_probs=67.5
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc----------------------------HHH
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE----------------------------NEL 159 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~----------------------------~~~ 159 (510)
.++++||+|| ++||++|+.++|.|.++++++++. ++.++.|+++.. ..+
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~--~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 132 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK--NVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDI 132 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT--TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHH
Confidence 5789999999 999999999999999999999763 577777766431 145
Q ss_pred HHhCCC-----CcccEEEEEe-CCee-eeecCC----CCHHHHHHHHHHHc
Q 010469 160 AHEYDV-----QGFPTIYFFV-DGQH-KAYNGG----RTKDAIVTWIKKKI 199 (510)
Q Consensus 160 ~~~~~v-----~~~P~~~~~~-~g~~-~~y~g~----~~~~~l~~~i~~~~ 199 (510)
++.|++ ..+|++++++ +|++ ..+.|. .+.+.+.+.|++..
T Consensus 133 ~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 133 SKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 667777 3689999996 7743 444453 46788888877654
No 299
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.82 E-value=3e-09 Score=90.50 Aligned_cols=87 Identities=16% Similarity=0.337 Sum_probs=58.0
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc---------------------HHHHHhCCCC
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE---------------------NELAHEYDVQ 166 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~---------------------~~~~~~~~v~ 166 (510)
.+++++|+|| ++||++|+.++|.+.++++++++. ++.++.|+.+.. .++++.|||.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~--~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~ 106 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV--NAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVA 106 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGC--SSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCE
T ss_pred CCCeEEEEecCCCCCCccccchhhccccccccccc--CceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCc
Confidence 5789999999 999999999999999999988773 577777765432 2566677763
Q ss_pred -----------cccEEEEEe-CCee-eeec-----CCCCHHHHHHHHHH
Q 010469 167 -----------GFPTIYFFV-DGQH-KAYN-----GGRTKDAIVTWIKK 197 (510)
Q Consensus 167 -----------~~P~~~~~~-~g~~-~~y~-----g~~~~~~l~~~i~~ 197 (510)
..|++++++ +|++ ..+. +..+.+++.+.|+.
T Consensus 107 ~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 107 WEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp EECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred cccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 468889996 7743 3332 34466777777754
No 300
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.81 E-value=2.3e-09 Score=86.34 Aligned_cols=66 Identities=24% Similarity=0.536 Sum_probs=54.4
Q ss_pred CCceEEE-eCcchhhHhhc---cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCcc
Q 010469 433 DGDVKIV-VGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHR 501 (510)
Q Consensus 433 ~~~~~~l-~~~~f~~~v~~---~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~ 501 (510)
.+.+..+ +.++|++.+.. .+++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++.+....
T Consensus 5 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~ 74 (118)
T 2vm1_A 5 EGAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP---GAIFLKVDVDELKDVA 74 (118)
T ss_dssp CCCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHH
T ss_pred CCceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC---CcEEEEEEcccCHHHH
Confidence 3455666 56789988865 47899999999999999999999999999886 5999999998765433
No 301
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.80 E-value=2.5e-08 Score=86.82 Aligned_cols=102 Identities=10% Similarity=0.135 Sum_probs=70.4
Q ss_pred cEEeChhcHHHHHhCCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc-----------------
Q 010469 95 VVVLKERNFSDVIENNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE----------------- 156 (510)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~----------------- 156 (510)
+..++++.+...--.+++++|+|| ++||++|..++|.|.++++++++. ++.++.|.++..
T Consensus 36 l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~--~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l 113 (179)
T 3ixr_A 36 LMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI--NATVLGVSRDSVKSHDSFCAKQGFTFPLV 113 (179)
T ss_dssp EEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT--TEEEEEEESCCHHHHHHHHHHHTCCSCEE
T ss_pred EECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHcCCceEEE
Confidence 444555544433235789999998 999999999999999999999873 577777776532
Q ss_pred ----HHHHHhCCCCc------------ccEEEEEe-CCee-eeecCCC---CHHHHHHHHHHH
Q 010469 157 ----NELAHEYDVQG------------FPTIYFFV-DGQH-KAYNGGR---TKDAIVTWIKKK 198 (510)
Q Consensus 157 ----~~~~~~~~v~~------------~P~~~~~~-~g~~-~~y~g~~---~~~~l~~~i~~~ 198 (510)
..+++.|++.. .|++++++ +|++ ..+.+.. ..+.+.+.|++.
T Consensus 114 ~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 114 SDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp ECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred ECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 25667788753 58899996 7744 4554432 335566555543
No 302
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.80 E-value=2.1e-08 Score=86.50 Aligned_cols=94 Identities=12% Similarity=0.113 Sum_probs=70.0
Q ss_pred CCCeEEEEEECCCCh-HHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc--c-----------------------------
Q 010469 109 NNKFVMVEFYAPWCG-HCQALAPEYAAAATELKSANESVVLAKVDATE--E----------------------------- 156 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~-~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~--~----------------------------- 156 (510)
.+++++|+||++||+ .|..+.|.+.++.++++..+.++.++.|.++. .
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~ 106 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDL 106 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHH
Confidence 478999999999997 69999999999999996544457777776541 1
Q ss_pred HHHHHhCCC---------CcccEEEEEe-CCee-eeecCC-CCHHHHHHHHHHHcCCC
Q 010469 157 NELAHEYDV---------QGFPTIYFFV-DGQH-KAYNGG-RTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 157 ~~~~~~~~v---------~~~P~~~~~~-~g~~-~~y~g~-~~~~~l~~~i~~~~~~~ 202 (510)
..+++.||+ ...|++++++ +|++ ..|.|. .+.+.+.+.|.+.....
T Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~~~ 164 (170)
T 3me7_A 107 FKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGEG 164 (170)
T ss_dssp HHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTTCS
T ss_pred HHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhccc
Confidence 135555553 3457899996 7754 456775 67899999998887654
No 303
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.80 E-value=2.2e-08 Score=85.37 Aligned_cols=81 Identities=20% Similarity=0.228 Sum_probs=58.5
Q ss_pred HHHhCCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc---------------------cHHHHHh
Q 010469 105 DVIENNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE---------------------ENELAHE 162 (510)
Q Consensus 105 ~~~~~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~---------------------~~~~~~~ 162 (510)
+...++++++|+|| ++||++|..++|.|.++++++++.+ .++.|.++. +..+++.
T Consensus 30 ~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~---~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 106 (159)
T 2a4v_A 30 KITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA---AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGL 106 (159)
T ss_dssp HHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC---EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHH
T ss_pred HHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC---cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHH
Confidence 33333458899987 9999999999999999999998744 555555432 2357788
Q ss_pred CCCCccc------EEEEEeCCee-eeecCCCCH
Q 010469 163 YDVQGFP------TIYFFVDGQH-KAYNGGRTK 188 (510)
Q Consensus 163 ~~v~~~P------~~~~~~~g~~-~~y~g~~~~ 188 (510)
|++...| +++++++|++ ..+.|....
T Consensus 107 ~gv~~~p~~g~~~~~~li~~G~i~~~~~g~~~~ 139 (159)
T 2a4v_A 107 LGAKKTPLSGSIRSHFIFVDGKLKFKRVKISPE 139 (159)
T ss_dssp HTCBSSSSSCBCCEEEEEETTEEEEEEESCCHH
T ss_pred hCCcccccCCccceEEEEcCCEEEEEEccCCcc
Confidence 9999888 4444488844 567776544
No 304
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.79 E-value=3.6e-09 Score=83.19 Aligned_cols=60 Identities=20% Similarity=0.501 Sum_probs=50.1
Q ss_pred eCcchhhHhhc-cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 440 VGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 440 ~~~~f~~~v~~-~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
+.++|++.+.+ .+++++|+||++||++|+.+.|.+.++++.+++ +.|+.+|++.+.....
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~~~~ 67 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN---VIFLEVDVDDCQDVAS 67 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT---SEEEEEETTTCHHHHH
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC---eEEEEEEhhhhHHHHH
Confidence 44578877764 478999999999999999999999999998864 9999999987754433
No 305
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.79 E-value=1.8e-09 Score=87.57 Aligned_cols=68 Identities=24% Similarity=0.627 Sum_probs=54.8
Q ss_pred CCceEEEeC-cchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 433 DGDVKIVVG-NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 433 ~~~~~~l~~-~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
.+.+..++. ++|++.+ +.+++++|+||++||++|+.+.|.+.++++.+.+ .++.|+.+|++.+.....
T Consensus 14 ~~~~~~i~~~~~f~~~l-~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~-~~v~~~~vd~d~~~~~~~ 82 (121)
T 2j23_A 14 RGSVQVISSYDQFKQVT-GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAG-DKVGFYKVDVDEQSQIAQ 82 (121)
T ss_dssp CCCEEECCSHHHHHHHH-SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHH-HHSEEEEEETTTCHHHHH
T ss_pred CcceEEcCCHHHHHHHH-cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcC-CcEEEEEEECcCCHHHHH
Confidence 445566655 7898877 5678999999999999999999999999988764 149999999998764433
No 306
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.78 E-value=4.6e-08 Score=85.69 Aligned_cols=89 Identities=13% Similarity=0.151 Sum_probs=66.7
Q ss_pred CCCeEEEEEEC-CCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc-------------------------HHHHHh
Q 010469 109 NNKFVMVEFYA-PWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-------------------------NELAHE 162 (510)
Q Consensus 109 ~~~~~~v~f~a-~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-------------------------~~~~~~ 162 (510)
.+++++|+||+ +||++|+.++|.|.++++++++. ++.++.|.++.. ..+++.
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ 106 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKL--GVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRN 106 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT--TEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHH
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHH
Confidence 57899999995 99999999999999999999873 577777776432 134556
Q ss_pred CCCC------cccEEEEEe-CCe-eeeecCCC----CHHHHHHHHHHHc
Q 010469 163 YDVQ------GFPTIYFFV-DGQ-HKAYNGGR----TKDAIVTWIKKKI 199 (510)
Q Consensus 163 ~~v~------~~P~~~~~~-~g~-~~~y~g~~----~~~~l~~~i~~~~ 199 (510)
|++. ..|++++++ +|+ ...+.|.. +.+.+.+.|+...
T Consensus 107 ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 107 FDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred hCCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 6765 369999996 774 34565543 5788888777654
No 307
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.76 E-value=1.8e-09 Score=88.20 Aligned_cols=49 Identities=14% Similarity=0.193 Sum_probs=42.2
Q ss_pred hccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEe--CCCCcC
Q 010469 449 LDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMD--GTTNEH 499 (510)
Q Consensus 449 ~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id--~~~n~~ 499 (510)
...+++++|+||++||++|+.+.|.+.++++.+++ ++.|+.+| ++.+..
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~d~~~~ 73 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG--KFNIYYARLEEEKNID 73 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS--SCEEEEEETTSSHHHH
T ss_pred HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCchHH
Confidence 34578999999999999999999999999999874 79999999 665443
No 308
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.75 E-value=1.8e-09 Score=85.85 Aligned_cols=61 Identities=15% Similarity=0.281 Sum_probs=49.2
Q ss_pred EEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccc
Q 010469 437 KIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRA 502 (510)
Q Consensus 437 ~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~ 502 (510)
..++.++| +.+. .+++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++.+.....
T Consensus 6 ~~~~~~~f-~~~~-~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~~l~~ 66 (110)
T 2l6c_A 6 DITTEAGM-AHFE-GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP---QVAISSVDSEARPELMK 66 (110)
T ss_dssp BCGGGCSH-HHHT-TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT---TSCEEEEEGGGCHHHHH
T ss_pred ecCCHHHH-HHHH-cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC---CcEEEEEcCcCCHHHHH
Confidence 44677899 5553 46889999999999999999999999988764 58999999876654433
No 309
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.74 E-value=5.2e-08 Score=87.12 Aligned_cols=89 Identities=12% Similarity=0.268 Sum_probs=67.1
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc----------------------------HHH
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE----------------------------NEL 159 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~----------------------------~~~ 159 (510)
.+++++|+|| ++||++|..++|.|.++++++++ .++.++.|+++.. ..+
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 124 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS--INTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQI 124 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT--TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHH
Confidence 5789999999 99999999999999999999976 3577777766421 145
Q ss_pred HHhCCCC------cccEEEEEe-CCee-eeecCC----CCHHHHHHHHHHHc
Q 010469 160 AHEYDVQ------GFPTIYFFV-DGQH-KAYNGG----RTKDAIVTWIKKKI 199 (510)
Q Consensus 160 ~~~~~v~------~~P~~~~~~-~g~~-~~y~g~----~~~~~l~~~i~~~~ 199 (510)
++.|++. .+|++++++ +|++ ..+.|. .+.+++.+.|....
T Consensus 125 ~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 125 SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 6677774 689999996 7743 444443 35677887777654
No 310
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.72 E-value=2.6e-08 Score=89.07 Aligned_cols=82 Identities=20% Similarity=0.289 Sum_probs=61.4
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeC-----------------------------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA----------------------------------- 153 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~----------------------------------- 153 (510)
+++++++.||++|||+|+++.|.+.++.+. + ..+.+..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~--v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~ 160 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--G--ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKE 160 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--T--EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSS
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--C--cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCCh
Confidence 457899999999999999999999986541 1 1233222221
Q ss_pred -------cccHHHHHhCCCCcccEEEEEeCCeeeeecCCCCHHHHHHHHHH
Q 010469 154 -------TEENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAIVTWIKK 197 (510)
Q Consensus 154 -------~~~~~~~~~~~v~~~P~~~~~~~g~~~~y~g~~~~~~l~~~i~~ 197 (510)
+++.++++++||+++||+++ .+|+ .+.|..+.+.|.++|.+
T Consensus 161 ~~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~--~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 161 VKTPNIVKKHYELGIQFGVRGTPSIVT-STGE--LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC--CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE--EecCCCCHHHHHHHHHh
Confidence 12346778999999999987 7776 56798899999999865
No 311
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.70 E-value=2.6e-09 Score=83.10 Aligned_cols=61 Identities=11% Similarity=0.086 Sum_probs=49.4
Q ss_pred CceEEE-eCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcC
Q 010469 434 GDVKIV-VGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH 499 (510)
Q Consensus 434 ~~~~~l-~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~ 499 (510)
+....+ +.+.|++.+.. +++++|+|||+||++|+.+.|.|+++++. + ++.|+++|++++..
T Consensus 6 ~~~~~i~s~e~f~~ii~~-~~~vvi~khatwCgpc~~~~~~~e~~~~~--~--~v~~~~vdVde~r~ 67 (112)
T 3iv4_A 6 GVAIKLSSIDQFEQVIEE-NKYVFVLKHSETCPISANAYDQFNKFLYE--R--DMDGYYLIVQQERD 67 (112)
T ss_dssp GCEEECCSHHHHHHHHHH-CSEEEEEEECTTCHHHHHHHHHHHHHHHH--H--TCCEEEEEGGGGHH
T ss_pred cceeecCCHHHHHHHHhc-CCCEEEEEECCcCHhHHHHHHHHHHHhcc--C--CceEEEEEeecCch
Confidence 344455 44578776654 88999999999999999999999999984 2 69999999988755
No 312
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.70 E-value=1.3e-08 Score=76.37 Aligned_cols=49 Identities=16% Similarity=0.325 Sum_probs=43.0
Q ss_pred CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 453 KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 453 ~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
..++|+||++||++|+.+.|.+.++++.+++ ++.++.+|++.+.....+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~ 51 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD--AVEVEYINVMENPQKAME 51 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS--SEEEEEEESSSSCCTTTS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC--ceEEEEEECCCCHHHHHH
Confidence 4689999999999999999999999999875 799999999887765554
No 313
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.70 E-value=4.1e-08 Score=89.58 Aligned_cols=88 Identities=13% Similarity=0.322 Sum_probs=66.5
Q ss_pred CCCeEEEEEEC-CCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc----------------------------HHH
Q 010469 109 NNKFVMVEFYA-PWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE----------------------------NEL 159 (510)
Q Consensus 109 ~~~~~~v~f~a-~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~----------------------------~~~ 159 (510)
.+++++|+||+ +||++|..++|.|.++++++++. ++.++.|.++.. ..+
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~--gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v 153 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI--NTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQI 153 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT--TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHH
Confidence 57899999999 99999999999999999999873 577777776532 246
Q ss_pred HHhCCCC------cccEEEEEe-CCee-eeecC----CCCHHHHHHHHHHH
Q 010469 160 AHEYDVQ------GFPTIYFFV-DGQH-KAYNG----GRTKDAIVTWIKKK 198 (510)
Q Consensus 160 ~~~~~v~------~~P~~~~~~-~g~~-~~y~g----~~~~~~l~~~i~~~ 198 (510)
++.|++. .+|++++++ +|++ ..+.+ ..+.+++.+.|...
T Consensus 154 ~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 154 SKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 6778887 689999996 7743 34333 34567777776654
No 314
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.69 E-value=1e-08 Score=87.87 Aligned_cols=95 Identities=15% Similarity=0.270 Sum_probs=69.0
Q ss_pred HHHHHhCCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc---------------------HHHH
Q 010469 103 FSDVIENNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE---------------------NELA 160 (510)
Q Consensus 103 ~~~~~~~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~---------------------~~~~ 160 (510)
+.+...++++++|+|| ++||++|..++|.|.++++++++. ++.++.|+.+.. .+++
T Consensus 26 Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~--~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~ 103 (164)
T 4gqc_A 26 LYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKA--NAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVI 103 (164)
T ss_dssp HHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGS--SSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHH
T ss_pred HHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhcc--CceEEEecCCCHHHHHHHHHhcCcccceeecCchHHH
Confidence 4455667889899888 999999999999999999999873 577777775432 2567
Q ss_pred HhCCCC----------cccEEEEEe-CCee-eeec-----CCCCHHHHHHHHHHHc
Q 010469 161 HEYDVQ----------GFPTIYFFV-DGQH-KAYN-----GGRTKDAIVTWIKKKI 199 (510)
Q Consensus 161 ~~~~v~----------~~P~~~~~~-~g~~-~~y~-----g~~~~~~l~~~i~~~~ 199 (510)
+.|||. ..|++++++ +|++ ..+. +..+.+++.+.+++..
T Consensus 104 ~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 104 KLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIA 159 (164)
T ss_dssp HHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHH
T ss_pred HHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 778874 368899996 7733 3333 3346677777776654
No 315
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.67 E-value=5.8e-08 Score=84.56 Aligned_cols=74 Identities=14% Similarity=0.174 Sum_probs=53.1
Q ss_pred CCC-eEEEEEECCCChHHhh-hhHHHHHHHHHHhhcCCCeE-EEEEeCccc-----------------------HHHHHh
Q 010469 109 NNK-FVMVEFYAPWCGHCQA-LAPEYAAAATELKSANESVV-LAKVDATEE-----------------------NELAHE 162 (510)
Q Consensus 109 ~~~-~~~v~f~a~wC~~C~~-~~p~~~~~~~~~~~~~~~v~-~~~vd~~~~-----------------------~~~~~~ 162 (510)
+++ ++|+.||++||++|+. ++|.|.++++++++. ++. ++.|+.+.. .++++.
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~--gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~ 132 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILAR--GVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFTKA 132 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTT--TCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHHHH
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHc--CCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHHHH
Confidence 455 5566677999999999 799999999999874 465 677765431 246677
Q ss_pred CCCC-----------cccEEEEEeCCee-eeecC
Q 010469 163 YDVQ-----------GFPTIYFFVDGQH-KAYNG 184 (510)
Q Consensus 163 ~~v~-----------~~P~~~~~~~g~~-~~y~g 184 (510)
||+. ..|+++++++|++ ..+.|
T Consensus 133 yGv~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~ 166 (184)
T 3uma_A 133 IGMEIDLSAGTLGIRSKRYSMLVEDGVVKALNIE 166 (184)
T ss_dssp TTCEEEEGGGTCEEEECCEEEEEETTEEEEEEEC
T ss_pred cCCceeccccCCcccceeEEEEECCCEEEEEEEe
Confidence 8775 3577888898843 44443
No 316
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.65 E-value=2e-08 Score=80.85 Aligned_cols=57 Identities=14% Similarity=0.216 Sum_probs=45.6
Q ss_pred ceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 435 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 435 ~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.+..++.++|.+.+. .+++++|+||++||++|+.+.|.+.++++.++. .+.++ |++.
T Consensus 13 ~~~~~~~~~~~~~~~-~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~--~~~~ 69 (118)
T 1zma_A 13 DLEVTTVVRAQEALD-KKETATFFIGRKTCPYCRKFAGTLSGVVAETKA--HIYFI--NSEE 69 (118)
T ss_dssp TSEECCHHHHHHHHH-TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC--CCEEE--ETTC
T ss_pred hhhcCCHHHHHHHHh-CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC--eEEEE--ECCC
Confidence 356678888988764 467999999999999999999999999998764 45554 4443
No 317
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.65 E-value=8.4e-08 Score=87.37 Aligned_cols=94 Identities=14% Similarity=0.190 Sum_probs=70.5
Q ss_pred HHHHhCCCe-EEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc---------------------------
Q 010469 104 SDVIENNKF-VMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE--------------------------- 155 (510)
Q Consensus 104 ~~~~~~~~~-~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~--------------------------- 155 (510)
.+.+..+++ +|+.||++||++|..+.|.|.++++++++. ++.++.|+++.
T Consensus 27 ~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~--gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~ 104 (249)
T 3a2v_A 27 DHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL--GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADP 104 (249)
T ss_dssp HHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT--TEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECT
T ss_pred HHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC--CcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECC
Confidence 444435665 566889999999999999999999999873 58888888753
Q ss_pred cHHHHHhCCCC-------cccEEEEEe-CCee-eeecCC----CCHHHHHHHHHHHc
Q 010469 156 ENELAHEYDVQ-------GFPTIYFFV-DGQH-KAYNGG----RTKDAIVTWIKKKI 199 (510)
Q Consensus 156 ~~~~~~~~~v~-------~~P~~~~~~-~g~~-~~y~g~----~~~~~l~~~i~~~~ 199 (510)
...+++.|++. .+|++++++ +|++ ..+.|. ++.+++.+.|....
T Consensus 105 ~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 105 QGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp TSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred chHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHH
Confidence 23578888887 899999996 7733 344443 46788888877654
No 318
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.65 E-value=3.5e-07 Score=73.62 Aligned_cols=93 Identities=12% Similarity=0.170 Sum_probs=79.0
Q ss_pred cEEe-ChhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhCCCCcccEEEE
Q 010469 95 VVVL-KERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEYDVQGFPTIYF 173 (510)
Q Consensus 95 v~~l-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P~~~~ 173 (510)
+..| +.+.++.++...++++|-|+++||.+| .+.|.++|+.+ + .+.|+.++ ++++++++++. .|++++
T Consensus 23 ~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~---d~~F~~t~---~~~v~~~~~v~-~~~vvl 91 (124)
T 2l4c_A 23 PTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-P---GVSFGIST---DSEVLTHYNIT-GNTICL 91 (124)
T ss_dssp CEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-T---TSEEEEEC---CHHHHHHTTCC-SSCEEE
T ss_pred ceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-C---CceEEEEC---hHHHHHHcCCC-CCeEEE
Confidence 4445 457788899888999999999999999 67899999998 5 58998886 47799999998 899999
Q ss_pred EeCC--eeeeecC----CCCHHHHHHHHHHH
Q 010469 174 FVDG--QHKAYNG----GRTKDAIVTWIKKK 198 (510)
Q Consensus 174 ~~~g--~~~~y~g----~~~~~~l~~~i~~~ 198 (510)
|+++ ....|.| ..+.+.|.+||...
T Consensus 92 fkkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 92 FRLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp EETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred EEcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 9976 5678886 78999999999864
No 319
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.65 E-value=1.1e-07 Score=81.25 Aligned_cols=75 Identities=19% Similarity=0.220 Sum_probs=55.2
Q ss_pred CCCeEEEEEE-CCCChHHh-hhhHHHHHHHHHHhhcCCCeE-EEEEeCcc-----------------------cHHHHHh
Q 010469 109 NNKFVMVEFY-APWCGHCQ-ALAPEYAAAATELKSANESVV-LAKVDATE-----------------------ENELAHE 162 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~-~~~p~~~~~~~~~~~~~~~v~-~~~vd~~~-----------------------~~~~~~~ 162 (510)
++++++|+|| ++||++|. .+.|.|.++++++++. ++. ++.|..+. +.++++.
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~--~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSK--GVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTHA 111 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT--TCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHHHH
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHHHH
Confidence 5789999999 89999999 9999999999999864 355 55555432 1246667
Q ss_pred CCCC-----------cccEEEEEeCCee-eeecCC
Q 010469 163 YDVQ-----------GFPTIYFFVDGQH-KAYNGG 185 (510)
Q Consensus 163 ~~v~-----------~~P~~~~~~~g~~-~~y~g~ 185 (510)
||+. ..|+++++++|++ ..+.|.
T Consensus 112 ~gv~~~~~~~g~~~~~~p~~~vid~G~i~~~~~~~ 146 (162)
T 1tp9_A 112 LGLELDLQEKGLGTRSRRFALLVDDLKVKAANIEG 146 (162)
T ss_dssp TTCEEEETTTTSEEEECCEEEEEETTEEEEEEECS
T ss_pred cCcccccccCCCCccceeEEEEEECCEEEEEEeeC
Confidence 7775 2799999997733 344443
No 320
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.65 E-value=1.4e-07 Score=80.61 Aligned_cols=85 Identities=12% Similarity=0.162 Sum_probs=60.6
Q ss_pred CCCeEEEEEEC-CCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc-----------------------HHHHHhCC
Q 010469 109 NNKFVMVEFYA-PWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-----------------------NELAHEYD 164 (510)
Q Consensus 109 ~~~~~~v~f~a-~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-----------------------~~~~~~~~ 164 (510)
.+++++|+||+ +||++|..++|.+.++++++ . ++.++.|+++.. ..+++.|+
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~---~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~g 116 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D---NTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYA 116 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T---TEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHT
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C---CcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHHhC
Confidence 57899999995 99999999999999998887 3 577777765421 24555666
Q ss_pred CC----c--ccEEEEEe-CCe-eeeecCC-----CCHHHHHHHHHH
Q 010469 165 VQ----G--FPTIYFFV-DGQ-HKAYNGG-----RTKDAIVTWIKK 197 (510)
Q Consensus 165 v~----~--~P~~~~~~-~g~-~~~y~g~-----~~~~~l~~~i~~ 197 (510)
+. + .|++++++ +|+ ...+.|. .+.+.+.+.|++
T Consensus 117 v~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 117 LLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp CBCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred CccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 65 3 39999996 774 3455542 234667766653
No 321
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.64 E-value=1.1e-07 Score=81.66 Aligned_cols=69 Identities=13% Similarity=0.145 Sum_probs=51.7
Q ss_pred CCCeEEEEEE-CCCChHHhh-hhHHHHHHHHHHhhcCCCe-EEEEEeCccc-----------------------HHHHHh
Q 010469 109 NNKFVMVEFY-APWCGHCQA-LAPEYAAAATELKSANESV-VLAKVDATEE-----------------------NELAHE 162 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~-~~p~~~~~~~~~~~~~~~v-~~~~vd~~~~-----------------------~~~~~~ 162 (510)
++++++|+|| ++||++|+. ++|.|.++++++++. ++ .++.|+.+.. .++++.
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~--gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ 107 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGK--GVDIIACMAVNDSFVMDAWGKAHGADDKVQMLADPGGAFTKA 107 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHT--TCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTSHHHHH
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCCCHHHHHHHHHhcCCCcceEEEECCCCcHHHH
Confidence 5678888876 999999999 999999999999873 47 7777765431 245666
Q ss_pred CCCCcc-----------cEEEEEeCCee
Q 010469 163 YDVQGF-----------PTIYFFVDGQH 179 (510)
Q Consensus 163 ~~v~~~-----------P~~~~~~~g~~ 179 (510)
|++... |+++++++|++
T Consensus 108 ~gv~~~~~~~~g~~~~~p~t~lI~~G~I 135 (167)
T 2wfc_A 108 VDMELDLSAVLGNVRSKRYSLVIEDGVV 135 (167)
T ss_dssp TTCEECCHHHHSSCEECCEEEEEETTEE
T ss_pred cCCccccccccCcccceEEEEEEeCCEE
Confidence 776543 88887777743
No 322
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.64 E-value=4.2e-09 Score=86.46 Aligned_cols=68 Identities=26% Similarity=0.508 Sum_probs=55.6
Q ss_pred CCceEEE-eCcchhhHhhc---cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccce
Q 010469 433 DGDVKIV-VGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 433 ~~~~~~l-~~~~f~~~v~~---~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~ 503 (510)
.+.+..+ +.++|++.+.. .+++++|+||++||++|+.+.|.+.++++.+. ++.|+.+|++.+.....+
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~ 84 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP---GAVFLKVDVDELKEVAEK 84 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT---TBCCEECCTTTSGGGHHH
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CCEEEEEeccchHHHHHH
Confidence 4556666 45789988865 47899999999999999999999999999886 599999999877654433
No 323
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.63 E-value=2.7e-07 Score=79.37 Aligned_cols=60 Identities=13% Similarity=0.185 Sum_probs=46.5
Q ss_pred cEEeChhcHHHHHhCCCeEEEEEECCCCh-HHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc
Q 010469 95 VVVLKERNFSDVIENNKFVMVEFYAPWCG-HCQALAPEYAAAATELKSANESVVLAKVDAT 154 (510)
Q Consensus 95 v~~l~~~~~~~~~~~~~~~~v~f~a~wC~-~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~ 154 (510)
+.+.+++.+...--+||+++|+||++||+ +|...++.+.++.+.++..+.++.++.|.++
T Consensus 17 L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 17 FTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp EECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred EECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC
Confidence 44445555443334789999999999997 7999999999999999876667878777654
No 324
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.63 E-value=6.9e-09 Score=85.15 Aligned_cols=57 Identities=23% Similarity=0.430 Sum_probs=47.6
Q ss_pred EeCcchhhHhh---ccCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCCcEEEEEEeCCCC
Q 010469 439 VVGNNFDEIVL---DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTN 497 (510)
Q Consensus 439 l~~~~f~~~v~---~~~~~vlv~f~~~~c~~C~~~~~~~---~~~a~~~~~~~~~~~~~id~~~n 497 (510)
++..+|.+.+. ..+++++|+||++||++|+.+.|.+ ..+++.++. ++.++.+|++..
T Consensus 11 ~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~ 73 (130)
T 2kuc_A 11 FRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR--HFVNLKMDMEKG 73 (130)
T ss_dssp CBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH--HSEEEEECSSST
T ss_pred cccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc--CeEEEEEecCCc
Confidence 56788988774 3578999999999999999999999 777777654 688999998853
No 325
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=98.62 E-value=1e-08 Score=84.53 Aligned_cols=52 Identities=21% Similarity=0.407 Sum_probs=43.7
Q ss_pred cchhhHhh---ccCCcEEEEEeCCCChhhhhhhHHHH--HHHHHhcCCCcEEEEEEeCC
Q 010469 442 NNFDEIVL---DESKDVLLEIYAPWCGHCQAFEPTYN--KLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 442 ~~f~~~v~---~~~~~vlv~f~~~~c~~C~~~~~~~~--~~a~~~~~~~~~~~~~id~~ 495 (510)
.+|++.+. ..+++++|+||++||++|+.+.|.+. ++++.+++ ++.++.+|++
T Consensus 16 ~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~--~~~~~~vd~~ 72 (133)
T 3fk8_A 16 TQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK--HFEVVKIDVG 72 (133)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH--HCEEEEEECT
T ss_pred hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC--CEEEEEEeCC
Confidence 34555443 45789999999999999999999999 99998865 7999999993
No 326
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.62 E-value=1.5e-08 Score=76.13 Aligned_cols=51 Identities=14% Similarity=0.234 Sum_probs=43.5
Q ss_pred cEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccceeEeee
Q 010469 454 DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKVIFDV 508 (510)
Q Consensus 454 ~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~~~~~v 508 (510)
.++|.||++||++|+.+.|.+.++++.+.+ ++.|+.+|++.+.....+ |||
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~--~~v 53 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD--KIDVEKIDIMVDREKAIE--YGL 53 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS--SCCEEEECTTTCGGGGGG--TCS
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHh--CCc
Confidence 368899999999999999999999999975 799999999988755554 454
No 327
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.61 E-value=2.1e-08 Score=91.19 Aligned_cols=59 Identities=10% Similarity=0.151 Sum_probs=51.4
Q ss_pred CCceEEEeCcchhhHhhccCCcEEEEEe--CCCChhhhhhhHHHHHHHHHhcC-CCcEEEEEEeCCC
Q 010469 433 DGDVKIVVGNNFDEIVLDESKDVLLEIY--APWCGHCQAFEPTYNKLAKHLRG-VDSIVIAKMDGTT 496 (510)
Q Consensus 433 ~~~~~~l~~~~f~~~v~~~~~~vlv~f~--~~~c~~C~~~~~~~~~~a~~~~~-~~~~~~~~id~~~ 496 (510)
.+.+..++..+|++.+ +..++|||.|| ||||+ +.|.|.++|+.+.+ ..++.|++|||+.
T Consensus 15 ~~~v~~Lt~~nF~~vi-~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~ 76 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTV-ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKD 76 (248)
T ss_dssp CTTCEECCTTTHHHHH-TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECS
T ss_pred CCCcEECCHHHHHHHH-hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCc
Confidence 4567889999999955 56789999999 99999 99999999999854 3589999999987
No 328
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.61 E-value=1.1e-07 Score=81.98 Aligned_cols=48 Identities=21% Similarity=0.430 Sum_probs=37.6
Q ss_pred HHHhCCCeEEEEEECCCChHHhhh-hHHHHHHHHHHhhcCCCeE-EEEEeCc
Q 010469 105 DVIENNKFVMVEFYAPWCGHCQAL-APEYAAAATELKSANESVV-LAKVDAT 154 (510)
Q Consensus 105 ~~~~~~~~~~v~f~a~wC~~C~~~-~p~~~~~~~~~~~~~~~v~-~~~vd~~ 154 (510)
+...+++++|++||++||++|+.+ +|.|.++++++++. ++. ++.|+.+
T Consensus 39 ~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~--g~~~vv~Is~d 88 (171)
T 2pwj_A 39 DIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAK--GVDSVICVAIN 88 (171)
T ss_dssp HHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHT--TCSEEEEEESS
T ss_pred HHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEeCC
Confidence 333344577889999999999999 99999999999874 455 6667654
No 329
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.60 E-value=3.8e-08 Score=73.23 Aligned_cols=70 Identities=13% Similarity=0.172 Sum_probs=51.7
Q ss_pred EEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHH---hCCCCcccEEEEEeCCeeeeecCCCCHHH
Q 010469 114 MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAH---EYDVQGFPTIYFFVDGQHKAYNGGRTKDA 190 (510)
Q Consensus 114 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~---~~~v~~~P~~~~~~~g~~~~y~g~~~~~~ 190 (510)
++.||++||++|++..+.|++. ++.+..+|+++++++.+ ++++.++|++ +.+|.. .|..+.+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~---------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~--~~~g~~---~~g~~~~~ 68 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR---------GFDFEMINVDRVPEAAEALRAQGFRQLPVV--IAGDLS---WSGFRPDM 68 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT---------TCCCEEEETTTCHHHHHHHHHTTCCSSCEE--EETTEE---EESCCHHH
T ss_pred EEEEcCCCChhHHHHHHHHHHC---------CCCeEEEECCCCHHHHHHHHHhCCCccCEE--EECCEE---EecCCHHH
Confidence 6789999999999999988752 36677889887766544 5899999998 347753 23456666
Q ss_pred HHHHHHH
Q 010469 191 IVTWIKK 197 (510)
Q Consensus 191 l~~~i~~ 197 (510)
|.+++.+
T Consensus 69 l~~~l~~ 75 (81)
T 1h75_A 69 INRLHPA 75 (81)
T ss_dssp HGGGSCC
T ss_pred HHHHHhc
Confidence 6666543
No 330
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.60 E-value=1.4e-08 Score=83.92 Aligned_cols=55 Identities=27% Similarity=0.604 Sum_probs=45.7
Q ss_pred eCcchhhHhhcc-CCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCCcEEEEEEeCCCC
Q 010469 440 VGNNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTN 497 (510)
Q Consensus 440 ~~~~f~~~v~~~-~~~vlv~f~~~~c~~C~~~~~~~---~~~a~~~~~~~~~~~~~id~~~n 497 (510)
+.++|...+.+. ++++||+||++||++|+.+.|.+ .++++.++ ++.++.+|++.+
T Consensus 18 ~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~---~~~~~~vd~~~~ 76 (134)
T 2fwh_A 18 TVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA---DTVLLQANVTAN 76 (134)
T ss_dssp SHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT---TSEEEEEECTTC
T ss_pred CHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc---CcEEEEEeCCCC
Confidence 345677666543 78999999999999999999999 88988886 499999999764
No 331
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.59 E-value=1.7e-07 Score=68.41 Aligned_cols=68 Identities=21% Similarity=0.328 Sum_probs=52.7
Q ss_pred EEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHH---hCCCCcccEEEEEeCCeeeeecCCCCHHH
Q 010469 114 MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAH---EYDVQGFPTIYFFVDGQHKAYNGGRTKDA 190 (510)
Q Consensus 114 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~---~~~v~~~P~~~~~~~g~~~~y~g~~~~~~ 190 (510)
++.|+++||++|++..+.|+++ ++.+..+|.+.++.+.+ ++++.++|++++ +|.. .|..+.+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~---------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~---~~g~~~~~ 68 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA---------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH---WSGFRPER 68 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT---------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE---EESCCHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc---------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE---EcCCCHHH
Confidence 6789999999999999988753 36677788887776655 789999999873 6753 34457788
Q ss_pred HHHHH
Q 010469 191 IVTWI 195 (510)
Q Consensus 191 l~~~i 195 (510)
+.+++
T Consensus 69 l~~~l 73 (75)
T 1r7h_A 69 IKQLQ 73 (75)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88776
No 332
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.58 E-value=6.9e-08 Score=88.67 Aligned_cols=87 Identities=14% Similarity=0.326 Sum_probs=64.8
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc----------------------------HHH
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE----------------------------NEL 159 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~----------------------------~~~ 159 (510)
.++++||+|| ++||++|..++|.|.++++++++. ++.++.|.++.. ..+
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~--gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~v 167 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI--NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQI 167 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHH
Confidence 5789999999 999999999999999999999873 577777776532 245
Q ss_pred HHhCCCC------cccEEEEEe-CCee-eeecC----CCCHHHHHHHHHH
Q 010469 160 AHEYDVQ------GFPTIYFFV-DGQH-KAYNG----GRTKDAIVTWIKK 197 (510)
Q Consensus 160 ~~~~~v~------~~P~~~~~~-~g~~-~~y~g----~~~~~~l~~~i~~ 197 (510)
++.|++. .+|++++++ +|++ ..+.+ ..+.+.+.+.|..
T Consensus 168 a~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 168 SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp HHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred HHHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHh
Confidence 6667775 579999996 7733 34443 3455677766654
No 333
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.57 E-value=5.7e-09 Score=86.78 Aligned_cols=68 Identities=13% Similarity=0.093 Sum_probs=44.0
Q ss_pred ceEEEeCcchhhHhhccCCcEEEEEeCCC--ChhhhhhhHHHHHHHHHhcCCCcEE--EEEEeCCCCcCccceeEeee
Q 010469 435 DVKIVVGNNFDEIVLDESKDVLLEIYAPW--CGHCQAFEPTYNKLAKHLRGVDSIV--IAKMDGTTNEHHRAKVIFDV 508 (510)
Q Consensus 435 ~~~~l~~~~f~~~v~~~~~~vlv~f~~~~--c~~C~~~~~~~~~~a~~~~~~~~~~--~~~id~~~n~~~~~~~~~~v 508 (510)
.+..++.++|++.+..+ +.++|+||++| |++|+.+.|.+.++++.+ + ++. |++||++.+...+.+ |||
T Consensus 18 ~~~~l~~~~f~~~i~~~-~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~--~v~~~~~~Vd~d~~~~la~~--~~V 89 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRV-GDGVILLSSDPRRTPEVSDNPVMIAELLREF-P--QFDWQVAVADLEQSEAIGDR--FNV 89 (142)
T ss_dssp TCEECCCC--------C-CSEEEEECCCSCC----CCHHHHHHHHHHTC-T--TSCCEEEEECHHHHHHHHHT--TTC
T ss_pred cCcccccccHHHHHHhC-CCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c--ccceeEEEEECCCCHHHHHh--cCC
Confidence 46778889999988643 45888999887 999999999999999988 5 677 999999876554443 454
No 334
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=98.57 E-value=3.8e-08 Score=85.06 Aligned_cols=61 Identities=15% Similarity=0.211 Sum_probs=47.4
Q ss_pred EEEeCcchhhHhh---ccCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCCcEEEEEEeCCCCcC
Q 010469 437 KIVVGNNFDEIVL---DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNEH 499 (510)
Q Consensus 437 ~~l~~~~f~~~v~---~~~~~vlv~f~~~~c~~C~~~~~~~---~~~a~~~~~~~~~~~~~id~~~n~~ 499 (510)
...+..+|++.+. ..+++|+|+|||+||++|+.|.+.+ .++.+.++. ++.++.+|++.+..
T Consensus 29 ~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~--~~~~v~v~~d~~~~ 95 (172)
T 3f9u_A 29 VHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN--DYVLITLYVDNKTP 95 (172)
T ss_dssp CCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEETTCCCE
T ss_pred cccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--CEEEEEEecCcccc
Confidence 3355678887764 4578999999999999999986555 666666654 79999999987764
No 335
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.57 E-value=1.8e-08 Score=86.19 Aligned_cols=46 Identities=22% Similarity=0.286 Sum_probs=39.8
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH 499 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~ 499 (510)
.+++++|.|||+||++|+.+.|.+.++++.+. ++.|+.+|++.+..
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~---~v~~~~v~~d~~~~ 98 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQP---NIELAIISKGRAED 98 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT---TEEEEEECHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CcEEEEEECCCCHH
Confidence 46789999999999999999999999998764 59999999876543
No 336
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.57 E-value=2.3e-07 Score=84.70 Aligned_cols=85 Identities=14% Similarity=0.298 Sum_probs=64.4
Q ss_pred CCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc-----------------------------------
Q 010469 110 NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT----------------------------------- 154 (510)
Q Consensus 110 ~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~----------------------------------- 154 (510)
.+.+++.|+.+|||+|+++.|.+.++.+. + +|.+..++..
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g---~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l 171 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS--G---KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKL 171 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT--T---SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC--C---cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCC
Confidence 46789999999999999999999887653 2 4655544321
Q ss_pred ---------------ccHHHHHhCCCCcccEEEEEe-CCeeeeecCCCCHHHHHHHHHHHc
Q 010469 155 ---------------EENELAHEYDVQGFPTIYFFV-DGQHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 155 ---------------~~~~~~~~~~v~~~P~~~~~~-~g~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
.+..+++++||+++|++++.. +|......|..+.+.|.++|.+..
T Consensus 172 ~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 172 NVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEEEEEESSCCHHHHHHHTTC--
T ss_pred CccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCEEEecCCCCHHHHHHHHHHHH
Confidence 123466789999999999987 576567889999999998887654
No 337
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=97.97 E-value=7.8e-09 Score=84.86 Aligned_cols=58 Identities=17% Similarity=0.272 Sum_probs=46.7
Q ss_pred ccCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCCcEEEEEEeCCCCcCccceeEeeee
Q 010469 450 DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNEHHRAKVIFDVN 509 (510)
Q Consensus 450 ~~~~~vlv~f~~~~c~~C~~~~~~~---~~~a~~~~~~~~~~~~~id~~~n~~~~~~~~~~v~ 509 (510)
..++++||+||++||++|+.+.|.+ .++++.+.. ++.++.+|++.++.......|||+
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~~v~ 77 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA--RFVVASVSVDTPEGQELARRYRVP 77 (130)
Confidence 3468999999999999999999999 888887765 799999999755555555456654
No 338
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.55 E-value=9.9e-08 Score=82.34 Aligned_cols=85 Identities=11% Similarity=0.137 Sum_probs=61.1
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc-----------------------HHHHHhCC
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-----------------------NELAHEYD 164 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-----------------------~~~~~~~~ 164 (510)
.+++++|+|| ++||++|..+.|.+.++++++ . ++.++.|.++.. ..+ +.|+
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~---~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~g 120 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-E---GVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDM-EKYG 120 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T---TEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGG-GGGT
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C---CceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcH-HHhC
Confidence 4789999999 899999999999999999887 3 577777765432 234 5555
Q ss_pred CC---------cccEEEEEe-CCee-eeecC-----CCCHHHHHHHHHHH
Q 010469 165 VQ---------GFPTIYFFV-DGQH-KAYNG-----GRTKDAIVTWIKKK 198 (510)
Q Consensus 165 v~---------~~P~~~~~~-~g~~-~~y~g-----~~~~~~l~~~i~~~ 198 (510)
+. ..|++++++ +|+. ..+.| ..+.+.+.+.|++.
T Consensus 121 v~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 121 VLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred CEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 54 259999996 7743 45543 34557777777653
No 339
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.52 E-value=2.5e-07 Score=80.95 Aligned_cols=92 Identities=15% Similarity=0.211 Sum_probs=64.9
Q ss_pred HHHHHHHHHHhhcCcccccccCCCCCCCCCCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC
Q 010469 404 LDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG 483 (510)
Q Consensus 404 ~e~i~~Fi~~~~~Gkl~~~~kSe~~p~~~~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~ 483 (510)
..++.+|+..+.+|.+......+......+-.+..+.|+.+.-.- -.+++++|+||++||++|+.+.|.+.++.+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~f~l~~~~G~~~~l~~-~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~ 91 (186)
T 1jfu_A 13 AVATAQKIAPLAHGEVAALTMASAPLKLPDLAFEDADGKPKKLSD-FRGKTLLVNLWATWCVPCRKEMPALDELQGKLSG 91 (186)
T ss_dssp HHHHHHHHGGGCCGGGTTCEECCSCCBCCCCEEECTTSCEEEGGG-GTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCB
T ss_pred HHHHhhhcchhhcchhhhhccccCCCcCCCcEeEcCCCCEeeHHH-cCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhcc
Confidence 456889999999999887765443221112222333343332111 1468999999999999999999999999999874
Q ss_pred CCcEEEEEEeCCCC
Q 010469 484 VDSIVIAKMDGTTN 497 (510)
Q Consensus 484 ~~~~~~~~id~~~n 497 (510)
.++.++.|+++.+
T Consensus 92 -~~~~vv~v~~d~~ 104 (186)
T 1jfu_A 92 -PNFEVVAINIDTR 104 (186)
T ss_dssp -TTEEEEEEECCCS
T ss_pred -CCcEEEEEECCCC
Confidence 4789999998754
No 340
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.52 E-value=1.1e-08 Score=80.67 Aligned_cols=59 Identities=10% Similarity=0.068 Sum_probs=39.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccceeEeeee
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKVIFDVN 509 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~~~~~v~ 509 (510)
+...+||+|||+||++|+.|.+.+............+.+.++|++.|..+..+..++|+
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~ 75 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVT 75 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCC
Confidence 34689999999999999999875543322110001367889999998765665555553
No 341
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.51 E-value=2.8e-07 Score=79.27 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=50.6
Q ss_pred CCCeE-EEEEECCCChHHh-hhhHHHHHHHHHHhhcCCCeEEEE-EeCcc-----------------------cHHHHHh
Q 010469 109 NNKFV-MVEFYAPWCGHCQ-ALAPEYAAAATELKSANESVVLAK-VDATE-----------------------ENELAHE 162 (510)
Q Consensus 109 ~~~~~-~v~f~a~wC~~C~-~~~p~~~~~~~~~~~~~~~v~~~~-vd~~~-----------------------~~~~~~~ 162 (510)
+++++ |++||++||++|. .++|.|.++++++++.+ +.++. |..+. +.++++.
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~g--v~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~ 119 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKG--VQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKE 119 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTT--CCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHHHH
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCC--CEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHHHH
Confidence 45554 5556699999999 59999999999998744 44443 54432 1256677
Q ss_pred CCCC-------------cccEEEEEeCCee-eeecC
Q 010469 163 YDVQ-------------GFPTIYFFVDGQH-KAYNG 184 (510)
Q Consensus 163 ~~v~-------------~~P~~~~~~~g~~-~~y~g 184 (510)
||+. ..|+++++++|++ ..+.+
T Consensus 120 yGv~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~ 155 (173)
T 3mng_A 120 TDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVE 155 (173)
T ss_dssp HTCBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEEC
T ss_pred hCCCcccccccccCCcceEEEEEEEECCEEEEEEEe
Confidence 7765 3599999997733 34443
No 342
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.51 E-value=3e-07 Score=80.90 Aligned_cols=86 Identities=23% Similarity=0.369 Sum_probs=65.8
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc---------------------------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE--------------------------------- 155 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~--------------------------------- 155 (510)
+++++|+.||.+|||+|+.+.|.+.++.+++.+ ++.|..+...-
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~~~~~~~~~aa~a~~aa~~~g~~~~~~~~lf~~~~~ 100 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA---DVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHK 100 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT---TEEEEEEECCCSTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC---CeEEEEEehhhccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999988765 57666554420
Q ss_pred ----------------------------------------cHHHHHhCCCCcccEEEEEeCCee-eeecCCCCHHHHHHH
Q 010469 156 ----------------------------------------ENELAHEYDVQGFPTIYFFVDGQH-KAYNGGRTKDAIVTW 194 (510)
Q Consensus 156 ----------------------------------------~~~~~~~~~v~~~P~~~~~~~g~~-~~y~g~~~~~~l~~~ 194 (510)
+...++++||.++|++++ +|+. ....|..+.+.+.+.
T Consensus 101 ~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~v--ng~~~~~~~G~~~~e~l~~~ 178 (192)
T 3h93_A 101 EHKKLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVV--NGKYRFDIGSAGGPEETLKL 178 (192)
T ss_dssp SCCCCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEEEHHHHTSHHHHHHH
T ss_pred hCcCCCCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCCeEEE--CCEEEecccccCCHHHHHHH
Confidence 013455689999999877 7744 455688888888888
Q ss_pred HHHHc
Q 010469 195 IKKKI 199 (510)
Q Consensus 195 i~~~~ 199 (510)
|...+
T Consensus 179 i~~l~ 183 (192)
T 3h93_A 179 ADYLI 183 (192)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87665
No 343
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.50 E-value=2.8e-07 Score=78.94 Aligned_cols=72 Identities=13% Similarity=0.167 Sum_probs=53.9
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-----------------------cHHHHHhCC
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-----------------------ENELAHEYD 164 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~~~~~~~ 164 (510)
.+++++|+|| ++||++|..++|.|.++++++ . ++.++.|+.+. ...+++.|+
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~---~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~g 117 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S---NTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQLG 117 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T---TEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C---CCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHHHHhC
Confidence 5789999999 899999999999999999988 3 47777776542 234666777
Q ss_pred CCc---------ccEEEEEe-CCee-eeecC
Q 010469 165 VQG---------FPTIYFFV-DGQH-KAYNG 184 (510)
Q Consensus 165 v~~---------~P~~~~~~-~g~~-~~y~g 184 (510)
+.. .|++++++ +|++ ..+.|
T Consensus 118 v~~~~~~~~g~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 118 VDIQTGPLAGLTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp CEECSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred ceecccccCCccceeEEEEcCCCEEEEEEeC
Confidence 653 49999996 7743 45543
No 344
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.49 E-value=2.6e-07 Score=79.22 Aligned_cols=84 Identities=13% Similarity=0.143 Sum_probs=59.4
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc-----------------------HHHHHhCC
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-----------------------NELAHEYD 164 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-----------------------~~~~~~~~ 164 (510)
.+++++|+|| +.||++|..++|.|.+++++ . ++.++.|..+.. ..+++.|+
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~----~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~g 119 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-E----EGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYG 119 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T----TSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHT
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-C----CCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhC
Confidence 5789999999 78999999999999998876 2 477777765422 24556667
Q ss_pred CCc------ccEEEEEe-CCee-eeec-----CCCCHHHHHHHHHH
Q 010469 165 VQG------FPTIYFFV-DGQH-KAYN-----GGRTKDAIVTWIKK 197 (510)
Q Consensus 165 v~~------~P~~~~~~-~g~~-~~y~-----g~~~~~~l~~~i~~ 197 (510)
+.. .|++++++ +|++ ..+. +..+.+.+.+.|++
T Consensus 120 v~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 120 VVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp CEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred CccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 664 89999996 7743 3322 23455677666643
No 345
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.44 E-value=7.1e-07 Score=78.72 Aligned_cols=43 Identities=33% Similarity=0.508 Sum_probs=37.5
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT 154 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~ 154 (510)
.+++++|.||++||++|+.+.|.+.++.+++.+ ++.+..++..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ---DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT---TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC---CeEEEEEecc
Confidence 468999999999999999999999999988766 6778777764
No 346
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.44 E-value=1.6e-07 Score=84.97 Aligned_cols=58 Identities=17% Similarity=0.280 Sum_probs=50.3
Q ss_pred CceEEEeCcchhhHhhccCCcEEEEEeC--CCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 434 GDVKIVVGNNFDEIVLDESKDVLLEIYA--PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 434 ~~~~~l~~~~f~~~v~~~~~~vlv~f~~--~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
..+..++..+|++.+ +..++|||.||| |||+ +.|.|.++|+.+.+..++.|++||++.
T Consensus 5 ~~v~~Lt~~nF~~~i-~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~ 64 (240)
T 2qc7_A 5 KGALPLDTVTFYKVI-PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISD 64 (240)
T ss_dssp TTCEECCTTHHHHHG-GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCC
T ss_pred CCceECCHHHHHHHH-cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCc
Confidence 457889999999966 556899999999 9999 999999999999754579999999764
No 347
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.40 E-value=2.6e-08 Score=78.25 Aligned_cols=31 Identities=19% Similarity=0.282 Sum_probs=27.5
Q ss_pred CCcEEEEEeCCCChhhhhhhHHHHHHHHHhc
Q 010469 452 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLR 482 (510)
Q Consensus 452 ~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~ 482 (510)
++.++|.|||+||++|+.+.|.|.++++.++
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~ 42 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP 42 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC
Confidence 4678999999999999999999999987664
No 348
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.40 E-value=3e-08 Score=84.87 Aligned_cols=48 Identities=19% Similarity=0.417 Sum_probs=38.0
Q ss_pred ccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcC
Q 010469 450 DESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH 499 (510)
Q Consensus 450 ~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~ 499 (510)
..++++||+|||+||++|+.+.|.|.++++.... ++.|+.+|++.++.
T Consensus 44 ~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~--~~~~~~v~~d~~~~ 91 (164)
T 1sen_A 44 ASGLPLMVIIHKSWCGACKALKPKFAESTEISEL--SHNFVMVNLEDEEE 91 (164)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH--HTTSEEEEEEGGGS
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc--CCeEEEEEecCCch
Confidence 4578999999999999999999999998776543 35566677666544
No 349
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.39 E-value=8.7e-07 Score=90.73 Aligned_cols=145 Identities=13% Similarity=0.068 Sum_probs=94.1
Q ss_pred cceEEEEEecc-chhhHHHHHHHHHHhccCceEEEEEEcCCcccccchhhhcCCCCCCCcEEEEeeCCCCCcccCCCCCC
Q 010469 325 KNQLLLFAVSN-DSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELT 403 (510)
Q Consensus 325 ~~~~v~~~~~~-~~~~~~~~~~~~A~~~~~~~~f~~vd~~~~~~~~~l~~~~gi~~~~~P~~~i~~~~~~~~y~~~~~~t 403 (510)
+..++++.+.. .+.+..+.++++|.- ..++.+...+ . . ....|++.+...++.....|-|-+.
T Consensus 20 ~v~l~~~~~~~~~~~~~~~~~~~~~~~-s~~i~~~~~~--~-~------------~~~~p~~~~~~~~~~~~i~f~g~p~ 83 (521)
T 1hyu_A 20 PVELIATLDDSAKSAEIKELLAEIAEL-SDKVTFKEDN--T-L------------PVRKPSFLITNPGSQQGPRFAGSPL 83 (521)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHHTT-CTTEEEEECT--T-S------------SSCSSEEEEECTTCCCSCEEESCCC
T ss_pred CEEEEEEeCCCcchHHHHHHHHHHHHh-CCceEEEEcC--C-c------------ccCCCEEEEecCCCcceEEEeccCc
Confidence 34456666653 366667777777654 4566653211 1 0 0346999887554444455567667
Q ss_pred HHHHHHHHHHhhcCcccccccCCCCCCCCCCceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC
Q 010469 404 LDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG 483 (510)
Q Consensus 404 ~e~i~~Fi~~~~~Gkl~~~~kSe~~p~~~~~~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~ 483 (510)
=.++..|+..+++=.-. -..++.+.++..........++.||++||++|+.+.|.+++++..+.
T Consensus 84 g~e~~s~~~~l~~~~~~---------------~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~- 147 (521)
T 1hyu_A 84 GHEFTSLVLALLWTGGH---------------PSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP- 147 (521)
T ss_dssp GGGHHHHHHHHHHHTTC---------------CCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-
T ss_pred chhHHHHHHHHHhhcCC---------------CCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-
Confidence 77788888887652111 11244455555433345567999999999999999999999988764
Q ss_pred CCcEEEEEEeCCCCcCccce
Q 010469 484 VDSIVIAKMDGTTNEHHRAK 503 (510)
Q Consensus 484 ~~~~~~~~id~~~n~~~~~~ 503 (510)
++.+..+|++.+.....+
T Consensus 148 --~v~~~~vd~~~~~~~~~~ 165 (521)
T 1hyu_A 148 --RIKHTAIDGGTFQNEITE 165 (521)
T ss_dssp --TEEEEEEETTTCHHHHHH
T ss_pred --ceEEEEEechhhHHHHHH
Confidence 699999999877654433
No 350
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.39 E-value=3.2e-06 Score=76.06 Aligned_cols=86 Identities=17% Similarity=0.137 Sum_probs=62.6
Q ss_pred eEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc-------------------------------HHHH
Q 010469 112 FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-------------------------------NELA 160 (510)
Q Consensus 112 ~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-------------------------------~~~~ 160 (510)
.+|+.||++||++|..+.|.|.++++++++. ++.++.|.++.. .+++
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~--~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va 111 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKR--NVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELA 111 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTT--TEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHH
Confidence 5677779999999999999999999999873 577777766531 2355
Q ss_pred HhCCCC------------cccEEEEEe-CCee-eeecC----CCCHHHHHHHHHHHc
Q 010469 161 HEYDVQ------------GFPTIYFFV-DGQH-KAYNG----GRTKDAIVTWIKKKI 199 (510)
Q Consensus 161 ~~~~v~------------~~P~~~~~~-~g~~-~~y~g----~~~~~~l~~~i~~~~ 199 (510)
+.|++. .+|++++++ +|++ ..+.| .++.+++.+.|....
T Consensus 112 ~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 112 ILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp HHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred HHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 667763 379999996 7733 34443 356788888877543
No 351
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.38 E-value=1.1e-06 Score=77.85 Aligned_cols=67 Identities=15% Similarity=0.238 Sum_probs=52.1
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-----------------------cHHHHHhCC
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE-----------------------ENELAHEYD 164 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~~~~~~~ 164 (510)
.+++++|+|| +.||++|..+.|.|.++++++ . ++.++.|.++. ...+++.|+
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~---~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~yg 152 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E---NTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFKQAYG 152 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T---TEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHHHHTT
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C---CCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHHHHhC
Confidence 5789999999 689999999999999999988 3 57777777652 234556666
Q ss_pred CC---------cccEEEEEe-CCee
Q 010469 165 VQ---------GFPTIYFFV-DGQH 179 (510)
Q Consensus 165 v~---------~~P~~~~~~-~g~~ 179 (510)
+. ..|++++++ +|++
T Consensus 153 v~~~~~~~~g~~~p~~~lID~~G~I 177 (200)
T 3zrd_A 153 VAITEGPLAGLTARAVVVLDGQDNV 177 (200)
T ss_dssp CEECSSTTTTSBCCEEEEECTTSBE
T ss_pred ceeecccCCCccccEEEEECCCCeE
Confidence 64 259999996 7743
No 352
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.36 E-value=8.7e-07 Score=69.42 Aligned_cols=68 Identities=21% Similarity=0.294 Sum_probs=47.0
Q ss_pred cHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc-------HHHHHhCCCCcccEEEEE
Q 010469 102 NFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-------NELAHEYDVQGFPTIYFF 174 (510)
Q Consensus 102 ~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-------~~~~~~~~v~~~P~~~~~ 174 (510)
.+++++..++ ++.|+++||++|++..+.|.++...+. . +..+|++.+ ..+.+.+++.++|++ |
T Consensus 4 ~~~~~i~~~~--v~~f~~~~C~~C~~~~~~L~~~~~~~~----~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i--~ 73 (105)
T 1kte_A 4 FVNSKIQPGK--VVVFIKPTCPFCRKTQELLSQLPFKEG----L--LEFVDITATSDTNEIQDYLQQLTGARTVPRV--F 73 (105)
T ss_dssp HHHHHCCTTC--EEEEECSSCHHHHHHHHHHHHSCBCTT----S--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--E
T ss_pred HHHhhcccCC--EEEEEcCCCHhHHHHHHHHHHcCCCCC----c--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--E
Confidence 4556665543 677999999999999999987543221 2 444565554 257778999999997 4
Q ss_pred eCCee
Q 010469 175 VDGQH 179 (510)
Q Consensus 175 ~~g~~ 179 (510)
.+|..
T Consensus 74 ~~g~~ 78 (105)
T 1kte_A 74 IGKEC 78 (105)
T ss_dssp ETTEE
T ss_pred ECCEE
Confidence 47753
No 353
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.35 E-value=7.2e-07 Score=76.34 Aligned_cols=47 Identities=19% Similarity=0.412 Sum_probs=41.6
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN 497 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n 497 (510)
.++++||+||++||++|+.+.|.+.++++.+++..++.++.|+++.+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~ 93 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEE 93 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCC
Confidence 36899999999999999999999999999997645788888888765
No 354
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.35 E-value=6e-07 Score=74.64 Aligned_cols=45 Identities=13% Similarity=0.226 Sum_probs=40.6
Q ss_pred CCcEEEEEeCCCChhhhhhhHHHHH---HHHHhcCCCcEEEEEEeCCCC
Q 010469 452 SKDVLLEIYAPWCGHCQAFEPTYNK---LAKHLRGVDSIVIAKMDGTTN 497 (510)
Q Consensus 452 ~~~vlv~f~~~~c~~C~~~~~~~~~---~a~~~~~~~~~~~~~id~~~n 497 (510)
+++++|+||++||++|+.++|.+.+ +.+.+++ .++.++.|+.+.+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~-~~~~vi~i~~d~~ 78 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAA-KKLKVLSIYPDEE 78 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHT-TSEEEEEEECSSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhcc-CCeEEEEEEcCCC
Confidence 5899999999999999999999999 9998865 5799999998765
No 355
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.34 E-value=8.4e-07 Score=73.93 Aligned_cols=47 Identities=19% Similarity=0.336 Sum_probs=41.2
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN 497 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n 497 (510)
.++++||+||++||++|+.+.|.+.++++.++...++.++.|+++.+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~ 73 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDES 73 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCC
Confidence 46899999999999999999999999999997434799999998754
No 356
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.33 E-value=2.6e-07 Score=79.00 Aligned_cols=57 Identities=21% Similarity=0.363 Sum_probs=44.4
Q ss_pred cchhhHhhccCCcEEEEEeCCCChhhhhhhHH-H--HHHHHHhcCCCcEEEEEEeCCCCcCcc
Q 010469 442 NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPT-Y--NKLAKHLRGVDSIVIAKMDGTTNEHHR 501 (510)
Q Consensus 442 ~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~-~--~~~a~~~~~~~~~~~~~id~~~n~~~~ 501 (510)
+.|.... ..+++|||.|||+||++|+.|.|. | .++++.++. +++++++|++.+...+
T Consensus 30 ea~~~A~-~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~--~fv~ikVD~de~~~l~ 89 (173)
T 3ira_A 30 EAFEKAR-KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE--AFVSIKVDREERPDID 89 (173)
T ss_dssp HHHHHHH-HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH--HCEEEEEETTTCHHHH
T ss_pred HHHHHHH-HhCCCEEEecccchhHhhccccccccCCHHHHHHHHh--cCceeeeCCcccCcHH
Confidence 4555433 457899999999999999999994 3 577777765 7999999998765443
No 357
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.33 E-value=1.9e-06 Score=77.28 Aligned_cols=86 Identities=13% Similarity=0.205 Sum_probs=62.2
Q ss_pred eEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc----------------------------HHHHHhC
Q 010469 112 FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE----------------------------NELAHEY 163 (510)
Q Consensus 112 ~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~----------------------------~~~~~~~ 163 (510)
.+|+.||++||++|..+.+.|.++++++++. ++.++.|.++.. ..+++.|
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~--~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~y 111 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKL--NCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKL 111 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHH
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHh
Confidence 5566679999999999999999999999873 577777776532 1456667
Q ss_pred CCC------------cccEEEEEe-CCee-eeecC----CCCHHHHHHHHHHHc
Q 010469 164 DVQ------------GFPTIYFFV-DGQH-KAYNG----GRTKDAIVTWIKKKI 199 (510)
Q Consensus 164 ~v~------------~~P~~~~~~-~g~~-~~y~g----~~~~~~l~~~i~~~~ 199 (510)
++. .+|++++++ +|++ ..+.| .++.+++.+.|....
T Consensus 112 gv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 112 KIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp TCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 773 379999996 7733 33332 457788888877543
No 358
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.33 E-value=9.3e-07 Score=73.86 Aligned_cols=47 Identities=15% Similarity=0.304 Sum_probs=41.2
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN 497 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n 497 (510)
.+++++|+||++||++|+.+.|.+.++++.+++..++.++.|+++.+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~ 73 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEE 73 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCS
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCC
Confidence 36899999999999999999999999999997434788999998754
No 359
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.32 E-value=2.4e-07 Score=67.89 Aligned_cols=37 Identities=24% Similarity=0.450 Sum_probs=33.5
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEe
Q 010469 455 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMD 493 (510)
Q Consensus 455 vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id 493 (510)
..|.||++||++|+.+.|.+.++++.+.. ++.++.+|
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~~v~ 38 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI--DAEFEKIK 38 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC--CEEEEEEC
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC--ceEEEEec
Confidence 35889999999999999999999998875 79999998
No 360
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.32 E-value=7.7e-07 Score=74.87 Aligned_cols=45 Identities=22% Similarity=0.486 Sum_probs=40.2
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.++++||+||++||++|+.+.|.+.++++.+++ .++.++.|+++.
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~~v~vv~v~~d~ 67 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKK-GSVDMVGIALDT 67 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TTEEEEEEESSC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc-CCeEEEEEECCC
Confidence 468999999999999999999999999999854 579999999863
No 361
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.30 E-value=1.2e-06 Score=72.98 Aligned_cols=47 Identities=21% Similarity=0.452 Sum_probs=41.1
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN 497 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n 497 (510)
.++++||+||++||++|+.+.|.+.++++.++...++.++.|+++.+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~ 73 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDEN 73 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSS
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCC
Confidence 36899999999999999999999999999987434788999988764
No 362
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.30 E-value=9e-07 Score=73.66 Aligned_cols=46 Identities=13% Similarity=0.195 Sum_probs=40.8
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN 497 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n 497 (510)
.+++++|+||++||++|+.+.|.+.++.+.+++ .++.++.|+++.+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~-~~~~vv~vs~d~~ 76 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGP-DKIAMCSISMDEK 76 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCT-TTEEEEEEECCSC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCc-CCEEEEEEEccCC
Confidence 368999999999999999999999999999875 3799999998765
No 363
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.28 E-value=4.2e-06 Score=75.59 Aligned_cols=89 Identities=13% Similarity=0.092 Sum_probs=64.4
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc-----------------------------HH
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE-----------------------------NE 158 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-----------------------------~~ 158 (510)
++++++|+|| ++||++|..+.+.|.++++++++. ++.++.|.++.. .+
T Consensus 28 Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~--~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~ 105 (233)
T 2v2g_A 28 GNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR--GVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRE 105 (233)
T ss_dssp CSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT--TEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCH
T ss_pred CCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc--CCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHH
Confidence 3348899998 999999999999999999999873 577777765431 13
Q ss_pred HHHhCCCC------------cccEEEEEe-CCee-eeecC----CCCHHHHHHHHHHHc
Q 010469 159 LAHEYDVQ------------GFPTIYFFV-DGQH-KAYNG----GRTKDAIVTWIKKKI 199 (510)
Q Consensus 159 ~~~~~~v~------------~~P~~~~~~-~g~~-~~y~g----~~~~~~l~~~i~~~~ 199 (510)
+++.|++. .+|++++++ +|++ ..+.| .++.+++.+.|....
T Consensus 106 va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 106 LAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp HHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 55667764 479999996 7733 34433 346788888777543
No 364
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.26 E-value=3.8e-07 Score=76.26 Aligned_cols=47 Identities=15% Similarity=0.412 Sum_probs=41.3
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHh-cCCCcEEEEEEeCCCCc
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHL-RGVDSIVIAKMDGTTNE 498 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~-~~~~~~~~~~id~~~n~ 498 (510)
.++++||+||++||++|+.+.|.+.++++.+ .+ .++.++.++++.+.
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~v~~d~~~ 79 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKN-KNFAMLGISLDIDR 79 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTC-TTEEEEEEECCSCH
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-CCeEEEEEECCCCH
Confidence 4689999999999999999999999999999 54 56999999987653
No 365
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.26 E-value=5e-06 Score=73.02 Aligned_cols=42 Identities=26% Similarity=0.549 Sum_probs=36.1
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeC
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA 153 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~ 153 (510)
.++++||.||+.|||+|+.+.|.+.++.+++.+ ++.|..++.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~---~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD---DMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT---TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC---CeEEEEecC
Confidence 467899999999999999999999999887766 577777665
No 366
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.25 E-value=1.4e-06 Score=74.37 Aligned_cols=59 Identities=19% Similarity=0.419 Sum_probs=46.4
Q ss_pred EEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCC
Q 010469 437 KIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN 497 (510)
Q Consensus 437 ~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n 497 (510)
..+.++.+...-. .++++||+||++||++|+.+.|.+.++++.+++ .++.|+.|+++.+
T Consensus 20 ~~~~g~~~~l~~~-~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~v~~v~v~~d~~ 78 (165)
T 3or5_A 20 VTVDGKPFSSASL-KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWAS-RGFTFVGIAVNEQ 78 (165)
T ss_dssp ECTTSCEEEGGGG-TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TTEEEEEEECSCC
T ss_pred eCCCCCEechhHc-CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc-CCeEEEEEECCCC
Confidence 3344554443222 468999999999999999999999999999986 4699999998754
No 367
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.25 E-value=2.4e-06 Score=71.28 Aligned_cols=57 Identities=14% Similarity=0.296 Sum_probs=48.0
Q ss_pred EEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 437 KIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 437 ~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
..++++.+..... .+++++|+||++||++|+.+.|.+.++++.+.+ ++.|+.++++.
T Consensus 15 ~~~~g~~~~~~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~--~~~~~~v~~~~ 71 (148)
T 2b5x_A 15 AWLNGEVTREQLI-GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD--QLNVVAVHMPR 71 (148)
T ss_dssp EEESCCCCHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEECCC
T ss_pred ccccCcccchhhc-CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC--CcEEEEEEcCC
Confidence 5677877765443 468999999999999999999999999999986 48999999765
No 368
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.24 E-value=1.2e-06 Score=74.61 Aligned_cols=59 Identities=17% Similarity=0.281 Sum_probs=46.6
Q ss_pred ceEEEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 435 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 435 ~~~~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
.+..+.++.+.... ..++++||+||++||++|+.+.|.+.++++.++. .++.++.|+++
T Consensus 22 ~l~~~~g~~~~~~~-~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~v~~~ 80 (164)
T 2h30_A 22 TMKTADNRPASVYL-KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKF-SSANLITVASP 80 (164)
T ss_dssp TCEETTSSBGGGGC-CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGG-TTSEEEEEECT
T ss_pred ccCCCCCCEeeHHH-hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccc-CCcEEEEEEcC
Confidence 45666777666433 3468999999999999999999999999998754 35788888765
No 369
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.23 E-value=3.4e-07 Score=71.18 Aligned_cols=50 Identities=16% Similarity=0.197 Sum_probs=40.6
Q ss_pred cEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccceeEeeee
Q 010469 454 DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKVIFDVN 509 (510)
Q Consensus 454 ~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~~~~~v~ 509 (510)
.+|+.||++||++|+.+.|.+.+++..+. +.|..+|++.++....+ ||++
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~----i~~~~vDId~d~~l~~~--ygv~ 79 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW----FELEVINIDGNEHLTRL--YNDR 79 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC----CCCEEEETTTCHHHHHH--STTS
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC----CeEEEEECCCCHHHHHH--hCCC
Confidence 67999999999999999999999988763 78899999977654433 4543
No 370
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.23 E-value=1.5e-06 Score=71.30 Aligned_cols=55 Identities=25% Similarity=0.520 Sum_probs=43.7
Q ss_pred EEeCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 438 IVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 438 ~l~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.+.++.+..... .+++++|+||++||++|+.+.|.+.++++.+. ++.|+.++++.
T Consensus 12 ~~~g~~~~l~~~-~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~ 66 (136)
T 1zzo_A 12 TLDGHDFHGESL-LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP---EVTFVGVAGLD 66 (136)
T ss_dssp BTTSCEEEGGGG-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSS
T ss_pred cCCCCEeeHHHh-CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC---CeEEEEEeCCC
Confidence 344555443322 46899999999999999999999999999886 68899999865
No 371
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.22 E-value=1.4e-06 Score=71.51 Aligned_cols=43 Identities=21% Similarity=0.547 Sum_probs=39.1
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.+++++|+||++||++|+.+.|.+.++++.+. ++.|+.++++.
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~ 65 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP---AVTFVGIATRA 65 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC---CcEEEEEEcCC
Confidence 46899999999999999999999999999886 68999999876
No 372
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.22 E-value=9e-07 Score=74.77 Aligned_cols=55 Identities=13% Similarity=0.311 Sum_probs=44.2
Q ss_pred cchhhHhh---ccCCcEEEEEe-CCCChhhhhhhHHH---HHHHHHhcCCCcEEEEEEeCCCCc
Q 010469 442 NNFDEIVL---DESKDVLLEIY-APWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNE 498 (510)
Q Consensus 442 ~~f~~~v~---~~~~~vlv~f~-~~~c~~C~~~~~~~---~~~a~~~~~~~~~~~~~id~~~n~ 498 (510)
.++.+.+. ..+++++|+|| ++||++|+.+.|.+ .++.+.... ++.++.+|++.+.
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~--~~~~v~vd~~~~~ 95 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV--HLHMVEVDFPQKN 95 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEECCSSC
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC--cEEEEEecCcccc
Confidence 45666553 34789999999 99999999999999 777766643 7999999998764
No 373
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.22 E-value=2.5e-06 Score=70.89 Aligned_cols=67 Identities=21% Similarity=0.303 Sum_probs=47.3
Q ss_pred hhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc---H----HHHHhCCCCcccEEE
Q 010469 100 ERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE---N----ELAHEYDVQGFPTIY 172 (510)
Q Consensus 100 ~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~---~----~~~~~~~v~~~P~~~ 172 (510)
.+.+++++..++ ++.|+++||++|+...+.|.++. +.+..+|++.. + .+.+.+++.++|+++
T Consensus 39 ~~~~~~~i~~~~--Vvvf~~~~Cp~C~~~k~~L~~~~---------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if 107 (146)
T 2ht9_A 39 VNQIQETISDNC--VVIFSKTSCSYCTMAKKLFHDMN---------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 107 (146)
T ss_dssp HHHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHHT---------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE
T ss_pred HHHHHHHhcCCC--EEEEECCCChhHHHHHHHHHHcC---------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE
Confidence 455667776554 34499999999999999998752 33445555544 3 377889999999984
Q ss_pred EEeCCee
Q 010469 173 FFVDGQH 179 (510)
Q Consensus 173 ~~~~g~~ 179 (510)
.+|..
T Consensus 108 --i~G~~ 112 (146)
T 2ht9_A 108 --VNGTF 112 (146)
T ss_dssp --ETTEE
T ss_pred --ECCEE
Confidence 47753
No 374
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.22 E-value=1.3e-06 Score=69.56 Aligned_cols=56 Identities=14% Similarity=0.143 Sum_probs=43.3
Q ss_pred EEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeE---EEEEeCcccH-------HHHHhCCCCcccEEEEEeCCee
Q 010469 113 VMVEFYAPWCGHCQALAPEYAAAATELKSANESVV---LAKVDATEEN-------ELAHEYDVQGFPTIYFFVDGQH 179 (510)
Q Consensus 113 ~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~---~~~vd~~~~~-------~~~~~~~v~~~P~~~~~~~g~~ 179 (510)
.++.|+++||++|++..+.|.++. +. +..+|++.++ .+.+.+++.++|+++ .+|+.
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~---------~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~--i~g~~ 85 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFS---------FKRGAYEIVDIKEFKPENELRDYFEQITGGKTVPRIF--FGKTS 85 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSC---------BCTTSEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEE--ETTEE
T ss_pred CEEEEEeCCChhHHHHHHHHHHcC---------CCcCceEEEEccCCCChHHHHHHHHHHhCCCCcCEEE--ECCEE
Confidence 477799999999999999887542 33 6677777663 688889999999874 37754
No 375
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.21 E-value=2.4e-06 Score=69.71 Aligned_cols=67 Identities=21% Similarity=0.303 Sum_probs=47.2
Q ss_pred hhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc---H----HHHHhCCCCcccEEE
Q 010469 100 ERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE---N----ELAHEYDVQGFPTIY 172 (510)
Q Consensus 100 ~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~---~----~~~~~~~v~~~P~~~ 172 (510)
.+.+++++..++ ++.|+++||++|+...+.|.++. +.+..+|++.. + .+.+.+++.++|+++
T Consensus 17 ~~~~~~~i~~~~--vvvf~~~~Cp~C~~~~~~L~~~~---------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~ 85 (130)
T 2cq9_A 17 VNQIQETISDNC--VVIFSKTSCSYCTMAKKLFHDMN---------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 85 (130)
T ss_dssp HHHHHHHHHHSS--EEEEECSSCSHHHHHHHHHHHHT---------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE
T ss_pred HHHHHHHHcCCc--EEEEEcCCChHHHHHHHHHHHcC---------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE
Confidence 455666666554 34499999999999999998752 33445666544 3 377888999999984
Q ss_pred EEeCCee
Q 010469 173 FFVDGQH 179 (510)
Q Consensus 173 ~~~~g~~ 179 (510)
.+|+.
T Consensus 86 --i~G~~ 90 (130)
T 2cq9_A 86 --VNGTF 90 (130)
T ss_dssp --ETTEE
T ss_pred --ECCEE
Confidence 47743
No 376
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.20 E-value=2.8e-06 Score=64.60 Aligned_cols=71 Identities=13% Similarity=0.203 Sum_probs=50.4
Q ss_pred EEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc---cc----HHHHHhCCCCcccEEEEEeCCeeeeecCCC
Q 010469 114 MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT---EE----NELAHEYDVQGFPTIYFFVDGQHKAYNGGR 186 (510)
Q Consensus 114 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~---~~----~~~~~~~~v~~~P~~~~~~~g~~~~y~g~~ 186 (510)
++.|+++||++|++..+.|+++. ..+....|+.. +. +++.+.+++.++|++++ +|.. .|..
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g-------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~~---i~G~ 81 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG-------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDKH---VLGY 81 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT-------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTEE---EESC
T ss_pred EEEEECCCChHHHHHHHHHHHcC-------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCEE---EeCC
Confidence 67799999999999998887652 13444333321 23 56667889999999976 6642 3456
Q ss_pred CHHHHHHHHH
Q 010469 187 TKDAIVTWIK 196 (510)
Q Consensus 187 ~~~~l~~~i~ 196 (510)
+.+.|.+++.
T Consensus 82 ~~~~l~~~l~ 91 (92)
T 3ic4_A 82 NEEKLKELIR 91 (92)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHhc
Confidence 8899998875
No 377
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.20 E-value=2.4e-06 Score=71.85 Aligned_cols=46 Identities=17% Similarity=0.317 Sum_probs=40.9
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN 497 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n 497 (510)
.+++++|+||++||++|+.+.|.+.++.+.+.+ .++.++.|+++.+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~v~~d~~ 73 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKD-KGFTIYGVSTDRR 73 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTT-TTEEEEEEECCSC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhcc-CCeEEEEEEccCC
Confidence 468999999999999999999999999999976 4699999998853
No 378
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.20 E-value=1.3e-06 Score=72.96 Aligned_cols=50 Identities=10% Similarity=0.226 Sum_probs=35.9
Q ss_pred cchhhHhh---ccCCcEEEEEeCCCChhhhhhhHHHHHHHH---HhcCCCcEEEEEEe
Q 010469 442 NNFDEIVL---DESKDVLLEIYAPWCGHCQAFEPTYNKLAK---HLRGVDSIVIAKMD 493 (510)
Q Consensus 442 ~~f~~~v~---~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~---~~~~~~~~~~~~id 493 (510)
.+|++.+. ..+++|+|+|||+||++|+.|.|.+.+..+ ..+. ++..+.+|
T Consensus 31 ~~~~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~--~fv~V~vD 86 (151)
T 3ph9_A 31 QTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQN--KFIMLNLM 86 (151)
T ss_dssp SSHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHH--TCEEEEES
T ss_pred hCHHHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhc--CeEEEEec
Confidence 35666553 457899999999999999999999986532 3321 45555555
No 379
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.20 E-value=1.8e-06 Score=72.68 Aligned_cols=47 Identities=15% Similarity=0.127 Sum_probs=41.5
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCc
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE 498 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~ 498 (510)
.+++++|+||++||++|+.+.|.+.++++.+++ .++.++.|+++.+.
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~-~~~~vv~i~~d~~~ 80 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYAS-QGFEIYQISLDGDE 80 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GTEEEEEEECSCCH
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhcc-CCeEEEEEEccCCH
Confidence 368999999999999999999999999999976 36999999988664
No 380
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.19 E-value=1.4e-06 Score=72.39 Aligned_cols=46 Identities=17% Similarity=0.476 Sum_probs=39.7
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHH---HHHHhcCCCcEEEEEEeCCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNK---LAKHLRGVDSIVIAKMDGTTN 497 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~---~a~~~~~~~~~~~~~id~~~n 497 (510)
.++++||+||++||++|+.++|.+.+ +.+.+++ .++.++.|+++.+
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~-~~~~~v~v~~d~~ 74 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN-GTLRVLAIYPDEN 74 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH-TSEEEEEEECSSC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc-CCeEEEEEEecCC
Confidence 36899999999999999999999988 8888765 4699999998754
No 381
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.19 E-value=3e-07 Score=68.96 Aligned_cols=45 Identities=7% Similarity=0.025 Sum_probs=34.0
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCcCccceeEeeee
Q 010469 456 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKVIFDVN 509 (510)
Q Consensus 456 lv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~~~~~~~~~~v~ 509 (510)
++.||++||++|+.+.|.+.+++..+ +.++|++.|+....+ ||++
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-------~~~vdid~~~~l~~~--~g~~ 47 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-------FFSVFIDDDAALESA--YGLR 47 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-------EEEEECTTCHHHHHH--HTTT
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-------eEEEECCCCHHHHHH--hCCC
Confidence 67899999999999999998765422 578999987654433 4543
No 382
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.14 E-value=6.1e-06 Score=72.60 Aligned_cols=42 Identities=24% Similarity=0.487 Sum_probs=34.6
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeC
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA 153 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~ 153 (510)
+++++|+.||.+|||+|+.+.|.+.++.+++.. ++.+..+..
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS---DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT---TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC---ceEEEEecc
Confidence 467899999999999999999999999988754 566655543
No 383
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.14 E-value=1.7e-06 Score=72.28 Aligned_cols=47 Identities=21% Similarity=0.356 Sum_probs=41.6
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCc
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE 498 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~ 498 (510)
.+++++|+||++||++|+.+.|.+.++.+.+++ .++.|+.|+++.+.
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~~v~v~~d~~~ 76 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRA-KGIQVYAANIERKD 76 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGG-GTEEEEEEECCSSS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhcc-CCEEEEEEEecCCH
Confidence 468999999999999999999999999999976 35999999987554
No 384
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.14 E-value=3.2e-06 Score=70.19 Aligned_cols=45 Identities=16% Similarity=0.502 Sum_probs=40.3
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.+++++|+||++||++|+.+.|.+.++++.++. .++.|+.|+++.
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~v~~d~ 77 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPS-DSVKLVTVNLVN 77 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCC-SSEEEEEEECGG
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CCEEEEEEEccC
Confidence 568999999999999999999999999999874 369999999865
No 385
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.14 E-value=3.4e-06 Score=71.36 Aligned_cols=44 Identities=16% Similarity=0.362 Sum_probs=39.2
Q ss_pred cCCcEEEEEeCCCChhhhhh-hHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAF-EPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~-~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
.++++||+||++||++|+.+ +|.+.++.+.+++ .++.|+.|+++
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~-~~v~~v~v~~~ 71 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPE-DKVAVLGLHTV 71 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCT-TTEEEEEEECC
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCc-CCEEEEEEEec
Confidence 36899999999999999995 9999999999975 47999999875
No 386
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.13 E-value=3.7e-06 Score=72.99 Aligned_cols=45 Identities=13% Similarity=0.055 Sum_probs=40.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.++++||+||++||++|+..+|.+.++.+.+++ .++.++.|+++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~-~~~~vi~is~d~ 81 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGP-SHFSVLAFPCNQ 81 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTT-TSEEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhcc-CCeEEEEEECCc
Confidence 468999999999999999999999999999976 468888888764
No 387
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.12 E-value=3.2e-06 Score=73.58 Aligned_cols=45 Identities=16% Similarity=0.446 Sum_probs=39.1
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcE------EEEEEeCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSI------VIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~------~~~~id~~~ 496 (510)
.++++||+||++||++|+.+.|.+.++.+.+++ .++ .|+.|+++.
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~-~~~~~~~~v~~v~v~~d~ 108 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQA-AGNGDTPGGTVLGINVRD 108 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHH-CC---CCSEEEEEEECSC
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHh-cCCCccCCcEEEEEECCC
Confidence 368999999999999999999999999999865 236 999999876
No 388
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.12 E-value=3e-06 Score=71.13 Aligned_cols=46 Identities=22% Similarity=0.525 Sum_probs=40.3
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN 497 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n 497 (510)
.++++||+||++||++|+.+.|.+.++++.+.. .++.|+.|+++.+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~v~~d~~ 70 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKS-QGVEIVAVNVGES 70 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GTEEEEEEEESCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc-CCeEEEEEECCCC
Confidence 468999999999999999999999999998875 4688999988654
No 389
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.12 E-value=3.9e-06 Score=71.14 Aligned_cols=44 Identities=16% Similarity=0.374 Sum_probs=39.2
Q ss_pred cCCcEEEEEeCCCChhhhh-hhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 451 ESKDVLLEIYAPWCGHCQA-FEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~-~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
.++++||+||++||++|+. +.|.+.++.+.+++ .++.|+.|+++
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~-~~v~~v~v~~~ 73 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDE-SQVQVIGLHSV 73 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCT-TTEEEEEEECC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCc-CCcEEEEEecc
Confidence 3789999999999999999 69999999999976 46999999874
No 390
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.10 E-value=4.9e-06 Score=70.46 Aligned_cols=45 Identities=24% Similarity=0.568 Sum_probs=40.8
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.+++++|+||++||++|+.+.|.+.++++.+.. .++.|+.++++.
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~v~~d~ 84 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPK-GDLVVLAVNVEK 84 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSST-TSEEEEEEECSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHccc-CCeEEEEEeCCH
Confidence 468999999999999999999999999999975 479999999876
No 391
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.10 E-value=2.8e-06 Score=72.79 Aligned_cols=52 Identities=31% Similarity=0.581 Sum_probs=39.2
Q ss_pred eCcchhhHhhccCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 440 VGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 440 ~~~~f~~~v~~~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.+..+.......++++||+||++||++|+.+.|.+.++++. ++.++.|+++.
T Consensus 39 ~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~v~~~~ 90 (168)
T 2b1k_A 39 PGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ-----GIRVVGMNYKD 90 (168)
T ss_dssp TTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCCEEEEEESC
T ss_pred CCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-----CCEEEEEECCC
Confidence 44554433334578999999999999999999999998875 46677777543
No 392
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.09 E-value=3.4e-06 Score=75.05 Aligned_cols=44 Identities=20% Similarity=0.198 Sum_probs=39.4
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
.+++|||+|||+||++|+..+|.+.++.+.+++ .++.++.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~-~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGP-RGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccC-CCeEEEEEECC
Confidence 368999999999999999999999999999976 36899999886
No 393
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.09 E-value=4.5e-06 Score=70.07 Aligned_cols=47 Identities=23% Similarity=0.645 Sum_probs=41.5
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCc
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE 498 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~ 498 (510)
.+++++|+||++||++|+.+.|.+.++.+.+.+ .++.|+.|+++.+.
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~~v~v~~d~~~ 75 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAG-KDIHFVSLSCDKNK 75 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTT-SSEEEEEEECCSCH
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhcc-CCeEEEEEEccCcH
Confidence 368999999999999999999999999998875 46999999988764
No 394
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.08 E-value=3.5e-06 Score=67.39 Aligned_cols=69 Identities=16% Similarity=0.365 Sum_probs=48.6
Q ss_pred hcHHHHHhCCCeEEEEEECCCChHHhhh-hHHHHHHHHHHhhcCCCeEEEEEeCcccH-------HHHHhCCCCcccEEE
Q 010469 101 RNFSDVIENNKFVMVEFYAPWCGHCQAL-APEYAAAATELKSANESVVLAKVDATEEN-------ELAHEYDVQGFPTIY 172 (510)
Q Consensus 101 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~-~p~~~~~~~~~~~~~~~v~~~~vd~~~~~-------~~~~~~~v~~~P~~~ 172 (510)
+.+++.+...+ ++.|+++||++|++. .+.|.+... ..+.+..+|.+.++ .+.+.+++.++|++
T Consensus 16 ~~~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~------~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v- 86 (118)
T 3c1r_A 16 KHVKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV------PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI- 86 (118)
T ss_dssp HHHHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC------CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE-
T ss_pred HHHHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC------CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE-
Confidence 44556665543 566999999999999 777765431 12667777776653 57788999999987
Q ss_pred EEeCCee
Q 010469 173 FFVDGQH 179 (510)
Q Consensus 173 ~~~~g~~ 179 (510)
|.+|+.
T Consensus 87 -fi~g~~ 92 (118)
T 3c1r_A 87 -YINGKH 92 (118)
T ss_dssp -EETTEE
T ss_pred -EECCEE
Confidence 557754
No 395
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.08 E-value=8.6e-06 Score=63.62 Aligned_cols=66 Identities=20% Similarity=0.392 Sum_probs=48.0
Q ss_pred hcHHHHHhCCCeEEEEEEC-----CCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHH----HHHhCCCCcccEE
Q 010469 101 RNFSDVIENNKFVMVEFYA-----PWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE----LAHEYDVQGFPTI 171 (510)
Q Consensus 101 ~~~~~~~~~~~~~~v~f~a-----~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~----~~~~~~v~~~P~~ 171 (510)
+.++++++.++ ++| |++ +||++|++..+.|.+. ++.+..+|++.++. +...+++.++|++
T Consensus 8 ~~~~~~i~~~~-vvv-f~~g~~~~~~C~~C~~~~~~L~~~---------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v 76 (105)
T 2yan_A 8 ERLKVLTNKAS-VML-FMKGNKQEAKCGFSKQILEILNST---------GVEYETFDILEDEEVRQGLKAYSNWPTYPQL 76 (105)
T ss_dssp HHHHHHHTSSS-EEE-EESBCSSSBCTTHHHHHHHHHHHH---------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHhccCC-EEE-EEecCCCCCCCccHHHHHHHHHHC---------CCCeEEEECCCCHHHHHHHHHHHCCCCCCeE
Confidence 45666776554 344 777 9999999999998764 26677888877765 4455789999998
Q ss_pred EEEeCCee
Q 010469 172 YFFVDGQH 179 (510)
Q Consensus 172 ~~~~~g~~ 179 (510)
|.+|..
T Consensus 77 --~i~g~~ 82 (105)
T 2yan_A 77 --YVKGEL 82 (105)
T ss_dssp --EETTEE
T ss_pred --EECCEE
Confidence 457753
No 396
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.08 E-value=6.3e-06 Score=69.33 Aligned_cols=46 Identities=17% Similarity=0.458 Sum_probs=41.3
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN 497 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n 497 (510)
.++++||+||++||++|+.+.|.+.++.+.+.+ .++.++.|+++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~v~~d~~ 72 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAG-KPFRMLCVSIDEG 72 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEEECCTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc-CCeEEEEEEcCCc
Confidence 468999999999999999999999999999975 5789999998875
No 397
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.07 E-value=2.2e-05 Score=67.60 Aligned_cols=83 Identities=18% Similarity=0.192 Sum_probs=60.1
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc---------------------------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE--------------------------------- 155 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~--------------------------------- 155 (510)
+.+++|+.|+..|||+|+.+.|.+.++.+++.+.+ ++.+...+..-
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~lf~~ 104 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSG-KVERIIKLFDKEKESLQRGNVMHHYIDYSAPEQALSALHKMFAT 104 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT-SEEEEEEECCCCSTTTHHHHHHHTTCCTTCHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCC-cEEEEEEeCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHc
Confidence 46788999999999999999999999988883211 46555543210
Q ss_pred ---------------------------------cHHHHHhCCCCcccEEEEEeCCeeeeecCCCCHHHHHHHHH
Q 010469 156 ---------------------------------ENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAIVTWIK 196 (510)
Q Consensus 156 ---------------------------------~~~~~~~~~v~~~P~~~~~~~g~~~~y~g~~~~~~l~~~i~ 196 (510)
...+++++||.++|++++ +|+ .+.|..+.+.|.+.|.
T Consensus 105 ~~~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~a~~~gv~gtPt~vv--ng~--~~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 105 QDEWGNLTLEEVATYAEKNLGLKEQKDATLVSAVIAEANAAHIQFVPTIII--GEY--IFDESVTEEELRGYIE 174 (175)
T ss_dssp HHHHTTSCHHHHHHHHHHTSCCCCCCCHHHHHHHHHHHHHHTCCSSCEEEE--TTE--EECTTCCHHHHHHHHT
T ss_pred ChhhccCCHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHcCCCCcCeEEE--CCE--EccCCCCHHHHHHHhc
Confidence 012345679999999654 776 3578888888887764
No 398
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.05 E-value=5.5e-06 Score=69.52 Aligned_cols=47 Identities=19% Similarity=0.511 Sum_probs=41.2
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCc
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE 498 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~ 498 (510)
.++++||+||++||++|+.+.|.+.++++.+.. .++.++.|+++.+.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~~v~v~~d~~~ 73 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKA-KGFQVVAVNLDAKT 73 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGG-GTEEEEEEECCSSH
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhc-CCeEEEEEECCCCH
Confidence 468999999999999999999999999999976 35899999988653
No 399
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.05 E-value=4.6e-06 Score=72.45 Aligned_cols=45 Identities=13% Similarity=0.158 Sum_probs=40.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.++++||+||++||++|+..+|.+.++++.+++ .++.++.|+++.
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~-~~v~vv~vs~d~ 92 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGP-HHFNVLAFPCNQ 92 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTEEEEEEECCC
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhc-CCEEEEEEECcC
Confidence 368999999999999999999999999999976 358999998864
No 400
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.04 E-value=5.3e-06 Score=71.08 Aligned_cols=45 Identities=18% Similarity=0.239 Sum_probs=40.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.++++||+||++||++|+.++|.+.++.+.+++ .++.++.|+++.
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~vs~d~ 75 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKD-QGLEILAFPCNQ 75 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTEEEEEEECCT
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhcc-CCEEEEEEECCC
Confidence 468999999999999999999999999999976 359999998863
No 401
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.03 E-value=5.4e-06 Score=70.95 Aligned_cols=45 Identities=16% Similarity=0.169 Sum_probs=40.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.++++||+||++||++|+...|.+.++.+.+++ .++.++.|+++.
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~v~~d~ 74 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVG-KGLRILAFPCNQ 74 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTEEEEEEECCC
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhc-CCeEEEEEECCc
Confidence 368999999999999999999999999999876 469999998864
No 402
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=98.03 E-value=1.6e-05 Score=61.80 Aligned_cols=71 Identities=15% Similarity=0.095 Sum_probs=48.2
Q ss_pred eEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc--c---HHHH----HhCCCCcccEEEEEeCCeeeee
Q 010469 112 FVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE--E---NELA----HEYDVQGFPTIYFFVDGQHKAY 182 (510)
Q Consensus 112 ~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~--~---~~~~----~~~~v~~~P~~~~~~~g~~~~y 182 (510)
..++.||++||++|++..+.|.+.. +.+-.+|.+. . +++. +..++.++|++++ .+| .+
T Consensus 22 ~~v~ly~~~~Cp~C~~ak~~L~~~~---------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i-~~~---~~ 88 (103)
T 3nzn_A 22 GKVIMYGLSTCVWCKKTKKLLTDLG---------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII-NDE---KA 88 (103)
T ss_dssp SCEEEEECSSCHHHHHHHHHHHHHT---------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE-TTT---EE
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcC---------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE-CCC---EE
Confidence 4477799999999999999998642 3334444443 1 2232 3468999999865 333 34
Q ss_pred cCCCCHHHHHHHH
Q 010469 183 NGGRTKDAIVTWI 195 (510)
Q Consensus 183 ~g~~~~~~l~~~i 195 (510)
.|..+.+.|.++|
T Consensus 89 igg~~~~~l~~~L 101 (103)
T 3nzn_A 89 IVGFKEKEIRESL 101 (103)
T ss_dssp EESCCHHHHHHHT
T ss_pred EEcCCHHHHHHHh
Confidence 5778888888765
No 403
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.02 E-value=3.5e-06 Score=73.63 Aligned_cols=44 Identities=14% Similarity=0.185 Sum_probs=39.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
.++++||+||++||++|+.++|.+.++.+.+++ .++.++.|+++
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~-~~~~vi~is~d 88 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKS-QGFTVLAFPSN 88 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGG-GTCEEEEEEBC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhh-CCeEEEEEECc
Confidence 468999999999999999999999999999976 35888888776
No 404
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.01 E-value=8.7e-06 Score=68.19 Aligned_cols=46 Identities=13% Similarity=0.302 Sum_probs=41.0
Q ss_pred cCCcEEEEEeCCCChh--hhhhhHHHHHHHHHh-cCCCcEEEEEEeCCCC
Q 010469 451 ESKDVLLEIYAPWCGH--CQAFEPTYNKLAKHL-RGVDSIVIAKMDGTTN 497 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~--C~~~~~~~~~~a~~~-~~~~~~~~~~id~~~n 497 (510)
.+++++|+||++||++ |+.+.|.+.++.+.+ ++ .++.++.|+++.+
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~-~~~~~v~v~~d~~ 80 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKN-KYIGMLGISLDVD 80 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTC-SSEEEEEEECCSC
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccC-CCeEEEEEEcCCC
Confidence 3689999999999999 999999999999999 54 5699999998865
No 405
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.01 E-value=8.9e-06 Score=66.60 Aligned_cols=43 Identities=28% Similarity=0.563 Sum_probs=37.6
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
.+++++|+||++||++|+.+.|.+.++++.+.. ++.++.++..
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~v~i~~~ 63 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD--DYVVLTVVSP 63 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT--TEEEEEEECT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC--CcEEEEEEcC
Confidence 468999999999999999999999999998654 7888988653
No 406
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.01 E-value=6.5e-06 Score=62.14 Aligned_cols=55 Identities=20% Similarity=0.433 Sum_probs=43.4
Q ss_pred EEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc--ccHHHHHhC-CCCcccEEEEEeCCee
Q 010469 114 MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT--EENELAHEY-DVQGFPTIYFFVDGQH 179 (510)
Q Consensus 114 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~--~~~~~~~~~-~v~~~P~~~~~~~g~~ 179 (510)
++.|+++||++|+...+.|++. ++.+..+|.+ ..+++.+.+ ++.++|+++ .+|..
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~---------~i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~~ 65 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKK---------GVKYTDIDASTSLRQEMVQRANGRNTFPQIF--IGDYH 65 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHH---------TCCEEEECSCHHHHHHHHHHHHSSCCSCEEE--ETTEE
T ss_pred EEEEECCCChhHHHHHHHHHHc---------CCCcEEEECCHHHHHHHHHHhCCCCCcCEEE--ECCEE
Confidence 7789999999999999988764 2556677776 456788888 999999984 37753
No 407
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.00 E-value=7.5e-06 Score=69.80 Aligned_cols=42 Identities=24% Similarity=0.457 Sum_probs=38.7
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
.++++||+||++||++|+.+.|.+.++.+.++ ++.|+.|+++
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~---~v~vv~i~~d 77 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR---EISVIAIDFW 77 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT---TEEEEEEECC
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC---CcEEEEEEec
Confidence 46899999999999999999999999999887 6999999987
No 408
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.00 E-value=2e-05 Score=59.46 Aligned_cols=75 Identities=23% Similarity=0.427 Sum_probs=55.2
Q ss_pred EEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHhC-----CCCcccEEEEEeCCeeeeecCCCC
Q 010469 113 VMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHEY-----DVQGFPTIYFFVDGQHKAYNGGRT 187 (510)
Q Consensus 113 ~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~-----~v~~~P~~~~~~~g~~~~y~g~~~ 187 (510)
.++.|+.+|||+|++....|.+. ++.|-.+|.+++++..+.+ |.+++|+++ +.+|... +..+
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~---------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~-i~Dg~~l---~~~~ 71 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN---------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVK-FADGSTL---TNPS 71 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT---------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEE-ETTSCEE---ESCC
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc---------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEE-EeCCEEE---eCCC
Confidence 37889999999999998887651 4777888888877654332 688999874 4666432 2347
Q ss_pred HHHHHHHHHHHcC
Q 010469 188 KDAIVTWIKKKIG 200 (510)
Q Consensus 188 ~~~l~~~i~~~~~ 200 (510)
.++|.++|.+..+
T Consensus 72 ~~el~~~L~el~g 84 (92)
T 2lqo_A 72 ADEVKAKLVKIAG 84 (92)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 7889999888764
No 409
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.00 E-value=1.6e-05 Score=66.07 Aligned_cols=82 Identities=23% Similarity=0.423 Sum_probs=62.0
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCc----------------------------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDAT---------------------------------- 154 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~---------------------------------- 154 (510)
+++.+|+.|+.++||+|+++.+.+.++ + ++.+...+.-
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~---~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~ 84 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM-----T---DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKF 84 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC-----C---SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc-----C---ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 467899999999999999999988654 2 3444433211
Q ss_pred ------------ccHHHHHhCCCCcccEEEEEeCCeeeeecCCCCHHHHHHHHHHHcCC
Q 010469 155 ------------EENELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDAIVTWIKKKIGP 201 (510)
Q Consensus 155 ------------~~~~~~~~~~v~~~P~~~~~~~g~~~~y~g~~~~~~l~~~i~~~~~~ 201 (510)
++..+++++||+++||+++ .+|. .+.|..+.+.|.++|.+....
T Consensus 85 ~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~--~i~G~~~~~~l~~~i~~~~~~ 140 (147)
T 3gv1_A 85 PVGGSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR--TQSGYSPMPQLEEIIRKNQQE 140 (147)
T ss_dssp CTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC--EEESCCCTTHHHHHHHHTSCC
T ss_pred CCccHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE--EeeCCCCHHHHHHHHHHHHHh
Confidence 1236678899999999988 6776 467999999999999877643
No 410
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.99 E-value=3.3e-05 Score=67.67 Aligned_cols=41 Identities=24% Similarity=0.381 Sum_probs=33.6
Q ss_pred CCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeC
Q 010469 110 NKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDA 153 (510)
Q Consensus 110 ~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~ 153 (510)
++++++.||.+|||+|..+.|.+.++.+++.+ ++.+..+..
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK---DVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT---TEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCC---ceEEEEeCc
Confidence 56789999999999999999999999887754 566655543
No 411
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.97 E-value=1.1e-05 Score=70.49 Aligned_cols=42 Identities=21% Similarity=0.401 Sum_probs=33.0
Q ss_pred CCeEEEEEECCCChHHhhhhHHH---HHHHHHHhhcCCCeEEEEEeCc
Q 010469 110 NKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVDAT 154 (510)
Q Consensus 110 ~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~ 154 (510)
.++++|.||+.|||+|+++.|.+ .++.+.+.+ ++.|..++..
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~ 58 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ---GSRMVKYHVS 58 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT---TCCEEEEECS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC---CCEEEEEech
Confidence 36889999999999999999987 577766654 5666666643
No 412
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.97 E-value=0.00011 Score=61.01 Aligned_cols=109 Identities=12% Similarity=0.204 Sum_probs=84.0
Q ss_pred CCcEEeChhcHHHHHhCCCeEEEEEECC-CChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeC--cccHHHHHhCCCCc--
Q 010469 93 KDVVVLKERNFSDVIENNKFVMVEFYAP-WCGHCQALAPEYAAAATELKSANESVVLAKVDA--TEENELAHEYDVQG-- 167 (510)
Q Consensus 93 ~~v~~l~~~~~~~~~~~~~~~~v~f~a~-wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~--~~~~~~~~~~~v~~-- 167 (510)
+-|.++|.++...+..++-+..++++.. --..-..+.+.+.++|+++++ ++.|+.+|. .+...+...||+..
T Consensus 14 PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkg---ki~Fv~vd~~~~~~~~~l~~fGl~~~~ 90 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG---KILFAFIDSDHTDNQRILEFFGLKKEE 90 (147)
T ss_dssp -CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTT---TCEEEEECTTCGGGHHHHHHTTCCGGG
T ss_pred CeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCC---ceEEEEEecchHhHHHHHHHcCCCccc
Confidence 3578899999998887776655554442 333456688999999999987 799999998 66667888999985
Q ss_pred ccEEEEEeC---Ceeeeec-CCCCHHHHHHHHHHHcCCCcc
Q 010469 168 FPTIYFFVD---GQHKAYN-GGRTKDAIVTWIKKKIGPGIY 204 (510)
Q Consensus 168 ~P~~~~~~~---g~~~~y~-g~~~~~~l~~~i~~~~~~~~~ 204 (510)
+|++.++.. +..+.+. +..+.+.|.+|++..+...+.
T Consensus 91 ~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~ 131 (147)
T 3bj5_A 91 CPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIK 131 (147)
T ss_dssp CSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSC
T ss_pred CCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCcc
Confidence 899999974 3445544 788999999999999866553
No 413
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.97 E-value=1.9e-05 Score=68.68 Aligned_cols=30 Identities=23% Similarity=0.445 Sum_probs=28.2
Q ss_pred CCeEEEEEECCCChHHhhhhHHHHHHHHHH
Q 010469 110 NKFVMVEFYAPWCGHCQALAPEYAAAATEL 139 (510)
Q Consensus 110 ~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~ 139 (510)
++++||.|+..|||+|+++.|.+.++.+.+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 578899999999999999999999999987
No 414
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.96 E-value=1.3e-05 Score=61.74 Aligned_cols=58 Identities=19% Similarity=0.271 Sum_probs=43.3
Q ss_pred CeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHHHHHh----C-CCCcccEEEEEeCCee
Q 010469 111 KFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENELAHE----Y-DVQGFPTIYFFVDGQH 179 (510)
Q Consensus 111 ~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~----~-~v~~~P~~~~~~~g~~ 179 (510)
+..++.|+++||++|++..+.|.+. ++.+..+|++.+++.... . +..++|++ |.+|+.
T Consensus 15 ~~~v~vy~~~~Cp~C~~ak~~L~~~---------~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~~ 77 (99)
T 3qmx_A 15 SAKIEIYTWSTCPFCMRALALLKRK---------GVEFQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQH 77 (99)
T ss_dssp CCCEEEEECTTCHHHHHHHHHHHHH---------TCCCEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTEE
T ss_pred CCCEEEEEcCCChhHHHHHHHHHHC---------CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCEE
Confidence 4457789999999999999999864 255667777777655443 3 89999987 456753
No 415
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=97.96 E-value=7.8e-06 Score=71.62 Aligned_cols=45 Identities=13% Similarity=0.163 Sum_probs=39.8
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.++++||+||++||++|+..+|.+.++.+.+++ .++.++.|+++.
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~-~~v~vv~vs~d~ 91 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKS-QGFTVLAFPCNQ 91 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTCEEEEEECCC
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhc-CCeEEEEEEcCc
Confidence 468999999999999999999999999999976 358888898873
No 416
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=97.96 E-value=1.2e-05 Score=67.38 Aligned_cols=44 Identities=18% Similarity=0.354 Sum_probs=38.6
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
.++++||+||++||++|+.+.|.+.++++.+.+ .++.++.++.+
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~v~~~ 70 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKN-KNFQVLAVAQP 70 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGG-TTEEEEEEECT
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhcc-CCeEEEEEecC
Confidence 468999999999999999999999999999875 46888888764
No 417
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=97.95 E-value=9.5e-06 Score=70.57 Aligned_cols=45 Identities=11% Similarity=0.074 Sum_probs=39.8
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.++++||+||++||++|+...|.+.++.+.+++ .++.++.|+++.
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~-~~v~vv~vs~d~ 90 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAE-CGLRILAFPCNQ 90 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTEEEEEEECCC
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhc-CCeEEEEEECCC
Confidence 368999999999999999999999999999976 468999998763
No 418
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.95 E-value=1.4e-05 Score=63.35 Aligned_cols=66 Identities=20% Similarity=0.443 Sum_probs=44.7
Q ss_pred hcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc----cHH----HHHhCCCCcccEEE
Q 010469 101 RNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----ENE----LAHEYDVQGFPTIY 172 (510)
Q Consensus 101 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----~~~----~~~~~~v~~~P~~~ 172 (510)
+.+++.+..++ ++.|+++||++|++..+.|.+. ++.+..+|.+. .++ +.+..+..++|++
T Consensus 10 ~~~~~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~---------~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i- 77 (113)
T 3rhb_A 10 ESIRKTVTENT--VVIYSKTWCSYCTEVKTLFKRL---------GVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV- 77 (113)
T ss_dssp HHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHHT---------TCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE-
T ss_pred HHHHHHHhcCC--EEEEECCCChhHHHHHHHHHHc---------CCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE-
Confidence 34555666555 6779999999999999998763 23444555544 232 4455699999998
Q ss_pred EEeCCee
Q 010469 173 FFVDGQH 179 (510)
Q Consensus 173 ~~~~g~~ 179 (510)
|.+|+.
T Consensus 78 -fi~g~~ 83 (113)
T 3rhb_A 78 -FVCGKH 83 (113)
T ss_dssp -EETTEE
T ss_pred -EECCEE
Confidence 457753
No 419
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=97.94 E-value=1e-05 Score=70.58 Aligned_cols=45 Identities=9% Similarity=-0.025 Sum_probs=39.7
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.++++||.||++||++|+...|.+.++.+.+++ .++.++.|+++.
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~-~~v~vv~is~d~ 92 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAE-CGLRILAFPCNQ 92 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTEEEEEEECCT
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhc-CCeEEEEEECcc
Confidence 368999999999999999999999999999976 368899998763
No 420
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.93 E-value=2.2e-06 Score=75.41 Aligned_cols=44 Identities=18% Similarity=0.354 Sum_probs=39.0
Q ss_pred CCeEEEEEECCCChHHhhhhHHH---HHHHHHHhhcCCCeEEEEEeCccc
Q 010469 110 NKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVDATEE 156 (510)
Q Consensus 110 ~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~~~ 156 (510)
++++||.||+.||+||+++.|.| +++++.+.+ ++.|..++.+.+
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~---~v~~~~~~v~~~ 159 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE---GVKMTKYHVNFM 159 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT---TCCEEEEECSSS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC---CCEEEEeccCcC
Confidence 57899999999999999999999 999888865 689999998764
No 421
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=97.92 E-value=3.3e-05 Score=65.85 Aligned_cols=75 Identities=16% Similarity=0.336 Sum_probs=53.1
Q ss_pred cHHHHHhCCCeEEEEEECCCChHHhh-hhHHHHHHHHHHhhcCCCe-EEEEEeCcc-----------------------c
Q 010469 102 NFSDVIENNKFVMVEFYAPWCGHCQA-LAPEYAAAATELKSANESV-VLAKVDATE-----------------------E 156 (510)
Q Consensus 102 ~~~~~~~~~~~~~v~f~a~wC~~C~~-~~p~~~~~~~~~~~~~~~v-~~~~vd~~~-----------------------~ 156 (510)
++.+.+.+++++|+.||+.|||.|.. ++|.|.+.+++++..+ + .++.|.++. +
T Consensus 40 sLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g--~d~VigIS~D~~~~~~~f~~~~~l~~~f~lLsD~~ 117 (176)
T 4f82_A 40 SVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAG--IDEIWCVSVNDAFVMGAWGRDLHTAGKVRMMADGS 117 (176)
T ss_dssp EHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT--CCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTT
T ss_pred eHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCC--CCEEEEEeCCCHHHHHHHHHHhCCCCCceEEEcCc
Confidence 34555555456677889999999999 9999999999998744 5 555555432 2
Q ss_pred HHHHHhCCCC-----------cccEEEEEeCCe
Q 010469 157 NELAHEYDVQ-----------GFPTIYFFVDGQ 178 (510)
Q Consensus 157 ~~~~~~~~v~-----------~~P~~~~~~~g~ 178 (510)
.++++.||+. ..|+++++++|+
T Consensus 118 ~~va~ayGv~~~~~~~G~g~~s~R~tfII~dG~ 150 (176)
T 4f82_A 118 AAFTHALGLTQDLSARGMGIRSLRYAMVIDGGV 150 (176)
T ss_dssp CHHHHHHTCEEECGGGTCCEEECCEEEEEETTE
T ss_pred hHHHHHhCCCccccccCCCcccccEEEEEcCCE
Confidence 3566777663 247777778883
No 422
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=97.15 E-value=1.4e-06 Score=72.39 Aligned_cols=46 Identities=20% Similarity=0.374 Sum_probs=38.7
Q ss_pred CC-cEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-CcEEEEEEeCCCC
Q 010469 452 SK-DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTN 497 (510)
Q Consensus 452 ~~-~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~-~~~~~~~id~~~n 497 (510)
++ +++|+||++||++|+.+.|.+.++++.++.. .++.++.|+++.+
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~ 72 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRS 72 (143)
Confidence 56 9999999999999999999999999988431 3678888887754
No 423
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.91 E-value=3.4e-05 Score=68.00 Aligned_cols=88 Identities=14% Similarity=0.242 Sum_probs=65.8
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc----------------------------cHHH
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~~ 159 (510)
.++++|++|| +.||+.|..+.+.|.+.+.+++.. ++.++.|.++. +.++
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~--g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~v 128 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQ--GAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSL 128 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHT--TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccC--CceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHH
Confidence 5789999999 899999999999999999999883 57777777652 1367
Q ss_pred HHhCCCC------cccEEEEEe-CCee--e-ee--cCCCCHHHHHHHHHHH
Q 010469 160 AHEYDVQ------GFPTIYFFV-DGQH--K-AY--NGGRTKDAIVTWIKKK 198 (510)
Q Consensus 160 ~~~~~v~------~~P~~~~~~-~g~~--~-~y--~g~~~~~~l~~~i~~~ 198 (510)
++.|||- .++.+++++ +|++ . .| .-.++.+++.+.|+..
T Consensus 129 ak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 129 SRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAF 179 (216)
T ss_dssp HHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHHh
Confidence 8888873 467888886 6632 1 22 2346778887777653
No 424
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=97.91 E-value=7.8e-06 Score=70.25 Aligned_cols=43 Identities=21% Similarity=0.245 Sum_probs=38.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
.++++||+||++||++|+ .+|.+.++.+.+++ .++.++.|+++
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~-~~v~vv~vs~d 73 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKD-EGFTIIGFPCN 73 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGG-GTEEEEEEEEC
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhcc-CCeEEEEEECc
Confidence 468999999999999999 99999999999976 35888888874
No 425
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=97.90 E-value=7.9e-06 Score=68.83 Aligned_cols=42 Identities=21% Similarity=0.512 Sum_probs=35.9
Q ss_pred CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCC
Q 010469 452 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN 497 (510)
Q Consensus 452 ~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n 497 (510)
+++++|+||++||++|+.+.|.+.++++. .++.|+.|+++.+
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~----~~v~~v~v~~~~~ 83 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKD----KRFQLVGINYKDA 83 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTC----TTSEEEEEEESCC
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhc----CCeEEEEEECCCC
Confidence 68999999999999999999999988765 3688888887543
No 426
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=97.90 E-value=8.6e-06 Score=68.48 Aligned_cols=39 Identities=21% Similarity=0.505 Sum_probs=35.0
Q ss_pred CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 453 KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 453 ~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
++++|+||++||++|+.+.|.+.++++.+ ++.|+.|+++
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~----~v~~v~v~~d 69 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET----GVPFYVISRE 69 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH----CCCEEEEECC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc----CCeEEEEeCC
Confidence 89999999999999999999999999988 4677777774
No 427
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.87 E-value=3.3e-05 Score=58.01 Aligned_cols=74 Identities=14% Similarity=0.170 Sum_probs=52.3
Q ss_pred EEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCccc----HHHHHhCCC-----CcccEEEEEeCCeeeeec
Q 010469 113 VMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEE----NELAHEYDV-----QGFPTIYFFVDGQHKAYN 183 (510)
Q Consensus 113 ~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~----~~~~~~~~v-----~~~P~~~~~~~g~~~~y~ 183 (510)
.++.|+++||++|++..+.|.+. +..+.+..+|...+ .++.+.++. .++|++++ +|..+
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~-------~i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i--- 72 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEEN-------NIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHI--- 72 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-------TCCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEE---
T ss_pred EEEEEEcCCChhHHHHHHHHHHc-------CCCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEE---
Confidence 47889999999999998887653 12466667776655 457777787 89999854 77543
Q ss_pred CCCCHHHHHHHHHHHcC
Q 010469 184 GGRTKDAIVTWIKKKIG 200 (510)
Q Consensus 184 g~~~~~~l~~~i~~~~~ 200 (510)
| ..+.+.+++.+.+.
T Consensus 73 ~--g~~~i~~~~~~~~~ 87 (89)
T 3msz_A 73 G--GFTELKANADKILN 87 (89)
T ss_dssp E--SHHHHHHTHHHHTT
T ss_pred e--ChHHHHHHHHHHhc
Confidence 2 35677777766553
No 428
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.09 E-value=1.9e-06 Score=73.06 Aligned_cols=48 Identities=23% Similarity=0.430 Sum_probs=40.3
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHH-HHHHhcCCCcEEEEEEeCCCCc
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNK-LAKHLRGVDSIVIAKMDGTTNE 498 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~-~a~~~~~~~~~~~~~id~~~n~ 498 (510)
.+++++|+||++||++|+.+.|.+.+ +.+.+....++.++.|+++.+.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~ 80 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPL 80 (159)
Confidence 36799999999999999999999998 8887762257889999887653
No 429
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.85 E-value=3.7e-05 Score=68.32 Aligned_cols=84 Identities=10% Similarity=0.014 Sum_probs=60.7
Q ss_pred CCCeEEEEEECCC-ChHHh-----hhhHHHHHHHHHHhhcCCCeEEEEEeCcc-----------------------cHHH
Q 010469 109 NNKFVMVEFYAPW-CGHCQ-----ALAPEYAAAATELKSANESVVLAKVDATE-----------------------ENEL 159 (510)
Q Consensus 109 ~~~~~~v~f~a~w-C~~C~-----~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~~ 159 (510)
.+++++|+||+.| |++|. .+++.|.++ +. ++.++.|.++. +..+
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~----gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~~~~v 119 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WP----HLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDF 119 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CT----TSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTTCTTH
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cC----CCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCCchHH
Confidence 5789999999998 99999 888888877 42 46666666441 2467
Q ss_pred HHhCCCCc---------ccEEEEEe-CCee-eee-----cCCCCHHHHHHHHHHHc
Q 010469 160 AHEYDVQG---------FPTIYFFV-DGQH-KAY-----NGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 160 ~~~~~v~~---------~P~~~~~~-~g~~-~~y-----~g~~~~~~l~~~i~~~~ 199 (510)
++.||+.. .|++++++ +|++ +.+ .+..+.+.+.+.|+...
T Consensus 120 ak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 120 HKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGE 175 (224)
T ss_dssp HHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHH
T ss_pred HHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhh
Confidence 78888864 79999996 7733 222 24566788888877654
No 430
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=97.85 E-value=2.6e-06 Score=62.90 Aligned_cols=38 Identities=13% Similarity=0.183 Sum_probs=28.2
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeC
Q 010469 455 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG 494 (510)
Q Consensus 455 vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~ 494 (510)
-++.||++||++|+.+.|.+.++++.+.. .+.++.+|.
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~ 40 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKY--TVEIVHLGT 40 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTE--EEEEEETTT
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCC--eEEEEEecC
Confidence 36789999999999999999987665432 355555543
No 431
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.83 E-value=8.9e-05 Score=64.26 Aligned_cols=86 Identities=16% Similarity=0.332 Sum_probs=62.8
Q ss_pred CCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEE--eCcccH-----------------------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKV--DATEEN----------------------------- 157 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~v--d~~~~~----------------------------- 157 (510)
.++++||.|+.-.||+|+++.|.+.++.+++.+ ++.+..+ .....+
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~ 96 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE---GAKFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKMVPVMFNRI 96 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT---TCEEEEEECSSSSGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCC---ceEEEEEecCCCCCchHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 357889999999999999999999999888766 3444433 321111
Q ss_pred --------------------------------------------HHHHhCCCCcccEEEEEeCCee-eeecCCCCHHHHH
Q 010469 158 --------------------------------------------ELAHEYDVQGFPTIYFFVDGQH-KAYNGGRTKDAIV 192 (510)
Q Consensus 158 --------------------------------------------~~~~~~~v~~~P~~~~~~~g~~-~~y~g~~~~~~l~ 192 (510)
..++++||+++||+++ ||+. +...|..+.+.+.
T Consensus 97 ~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gTPtfiI--NGky~v~~~~~~s~e~~~ 174 (184)
T 4dvc_A 97 HTLRKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDSGLTGVPAVVV--NNRYLVQGQSAKSLDEYF 174 (184)
T ss_dssp HTSCCCCSSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHH
T ss_pred HHHhhccchHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEEeeCCcCCCCHHHHH
Confidence 4566789999999866 7853 4555677888888
Q ss_pred HHHHHHc
Q 010469 193 TWIKKKI 199 (510)
Q Consensus 193 ~~i~~~~ 199 (510)
+.|..++
T Consensus 175 ~~i~~Ll 181 (184)
T 4dvc_A 175 DLVNYLL 181 (184)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 8777655
No 432
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=97.82 E-value=2.2e-05 Score=70.39 Aligned_cols=43 Identities=12% Similarity=0.316 Sum_probs=38.5
Q ss_pred CC-cEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 452 SK-DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 452 ~~-~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
++ .+||+||++||++|+.+.|.+.++++.+++ .++.|+.|+++
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Vs~d 101 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAG-QGLAVVAINSN 101 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTT-TTEEEEEEECS
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHh-CCcEEEEEECC
Confidence 56 499999999999999999999999999976 45999999985
No 433
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=97.80 E-value=2.8e-05 Score=67.81 Aligned_cols=44 Identities=11% Similarity=0.187 Sum_probs=39.4
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.++++||+||++||++|+.++|.+.++.+.+.+ ++.|+.|+++.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~--~~~~v~v~~d~ 75 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRG--KVAFVGINAND 75 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTT--TEEEEEEECCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhc--CeEEEEEEcCc
Confidence 368999999999999999999999999999987 39999999854
No 434
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=97.80 E-value=5e-06 Score=69.48 Aligned_cols=53 Identities=11% Similarity=0.155 Sum_probs=43.0
Q ss_pred cchhhHhh---ccCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCCcEEEEEEeCCC
Q 010469 442 NNFDEIVL---DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 442 ~~f~~~v~---~~~~~vlv~f~~~~c~~C~~~~~~~---~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.+|++.+. ..+|+++|+||++||..|+.|...+ .++++.++. +++++++|++.
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~--~fv~v~~d~~~ 87 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE--HFIFWQVYHDS 87 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH--TEEEEEEESSS
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc--CeEEEEEecCC
Confidence 57777663 3478999999999999999998877 667777754 79999999854
No 435
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=97.80 E-value=2.1e-05 Score=67.90 Aligned_cols=39 Identities=26% Similarity=0.675 Sum_probs=33.9
Q ss_pred CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 452 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 452 ~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
++++||+||++||++|+.+.|.+.++.+. ++.++.|+++
T Consensus 58 gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~vs~~ 96 (176)
T 3kh7_A 58 GKPALVNVWGTWCPSCRVEHPELTRLAEQ-----GVVIYGINYK 96 (176)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCEEEEEEES
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHC-----CCEEEEEeCC
Confidence 68999999999999999999999998875 4777777754
No 436
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=97.80 E-value=2.3e-05 Score=75.25 Aligned_cols=44 Identities=18% Similarity=0.311 Sum_probs=39.6
Q ss_pred CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
++++||+||++||++|+.+.|.+.++++.+++ .++.|+.|+++.
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~-~~v~vi~Vs~d~ 125 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKD-SGLAVIGVHTPE 125 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GTEEEEEEECCS
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhhc-CCeEEEEEECCc
Confidence 68999999999999999999999999999975 369999998764
No 437
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=97.79 E-value=1.6e-05 Score=68.19 Aligned_cols=47 Identities=15% Similarity=0.167 Sum_probs=40.1
Q ss_pred cCCcEEEEEeCCCChh-hhhhhHHHHHHHHHhcCC--CcEEEEEEeCCCC
Q 010469 451 ESKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRGV--DSIVIAKMDGTTN 497 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~-C~~~~~~~~~~a~~~~~~--~~~~~~~id~~~n 497 (510)
.++++||+||++||++ |+.+.|.+.++.+.++.. .++.++.|+++.+
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~ 83 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPE 83 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTT
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCC
Confidence 3689999999999997 999999999999888742 2689999998754
No 438
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.78 E-value=4.6e-05 Score=56.22 Aligned_cols=67 Identities=16% Similarity=0.297 Sum_probs=46.4
Q ss_pred EEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccH----HHHHhCCCCcccEEEEEeCCeeeeecCCCCHH
Q 010469 114 MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEEN----ELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKD 189 (510)
Q Consensus 114 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~----~~~~~~~v~~~P~~~~~~~g~~~~y~g~~~~~ 189 (510)
++.|+++||++|++..+.|.+. ++.+..+|++.++ ++.+.+++.++|+++ .+|... .| .+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~---------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~i--~g---~~ 66 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK---------GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQHI--GG---YD 66 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH---------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEEE--ES---HH
T ss_pred EEEEECCCChhHHHHHHHHHHC---------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEEE--eC---HH
Confidence 6779999999999999988763 2455566666543 356678999999984 477543 22 35
Q ss_pred HHHHHHH
Q 010469 190 AIVTWIK 196 (510)
Q Consensus 190 ~l~~~i~ 196 (510)
.+.+++.
T Consensus 67 ~i~~~~~ 73 (82)
T 1fov_A 67 DLYALDA 73 (82)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5666554
No 439
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.78 E-value=3.6e-06 Score=65.11 Aligned_cols=38 Identities=16% Similarity=0.235 Sum_probs=32.1
Q ss_pred CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 452 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 452 ~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
..+++++|+++||++|+.+.+.+.++++ ++.|..+|++
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~------~i~~~~vdi~ 52 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKD------RFILQEVDIT 52 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSS------SSEEEEEETT
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhh------CCeEEEEECC
Confidence 3578999999999999999999886532 4889999998
No 440
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=97.78 E-value=1.7e-05 Score=69.69 Aligned_cols=44 Identities=9% Similarity=0.224 Sum_probs=38.4
Q ss_pred CC-cEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SK-DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~-~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
++ ++||+||++||++|+.+.|.+.++.+.+.+ .++.|+.|+++.
T Consensus 45 gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~v~~d~ 89 (196)
T 2ywi_A 45 SDAATVIMFICNHCPFVKHVQHELVRLANDYMP-KGVSFVAINSND 89 (196)
T ss_dssp CSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGG-GTCEEEEEECSC
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHh-CCcEEEEEECCc
Confidence 55 599999999999999999999999999875 358888998854
No 441
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.76 E-value=3e-05 Score=65.76 Aligned_cols=43 Identities=12% Similarity=0.145 Sum_probs=38.1
Q ss_pred CCc-EEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 452 SKD-VLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 452 ~~~-vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
++. ++|+|| ++||++|....|.+.++.+.+++ .++.++.|+++
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~vs~d 72 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKD-YDVVVIGVSSD 72 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHT-TCEEEEEEESC
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHH-cCCEEEEEeCC
Confidence 565 999999 99999999999999999999975 35888888875
No 442
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=97.74 E-value=3.4e-05 Score=65.50 Aligned_cols=46 Identities=7% Similarity=0.090 Sum_probs=39.2
Q ss_pred CCcEEEEEeCCCChh-hhhhhHHHHHHHHHhcC---CCcEEEEEEeCCCC
Q 010469 452 SKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRG---VDSIVIAKMDGTTN 497 (510)
Q Consensus 452 ~~~vlv~f~~~~c~~-C~~~~~~~~~~a~~~~~---~~~~~~~~id~~~n 497 (510)
++++||+||++||++ |..+.|.+.++.+.++. ..++.++.|+++.+
T Consensus 23 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~ 72 (164)
T 2ggt_A 23 GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPE 72 (164)
T ss_dssp TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTT
T ss_pred CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCC
Confidence 689999999999998 99999999999998853 13788888888653
No 443
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=97.74 E-value=3.5e-05 Score=65.99 Aligned_cols=45 Identities=11% Similarity=0.143 Sum_probs=38.9
Q ss_pred CCcEEEEEeCCCChh-hhhhhHHHHHHHHHhcC---CCcEEEEEEeCCC
Q 010469 452 SKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRG---VDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~~~~c~~-C~~~~~~~~~~a~~~~~---~~~~~~~~id~~~ 496 (510)
++++||+||++||++ |..+.|.+.++.+.++. ..++.++.|+++.
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~ 74 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDP 74 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCS
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECC
Confidence 689999999999998 99999999999998852 1378888888874
No 444
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=97.73 E-value=2.4e-05 Score=66.19 Aligned_cols=44 Identities=16% Similarity=0.243 Sum_probs=38.4
Q ss_pred CC-cEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SK-DVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~-~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
++ +++|+|| ++||++|+.+.|.+.++.+.+++ .++.++.|+++.
T Consensus 35 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~-~~~~vv~is~d~ 80 (160)
T 1xvw_A 35 GAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEN-DDSAALAISVGP 80 (160)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSS-SSEEEEEEESCC
T ss_pred CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHH-CCcEEEEEeCCC
Confidence 55 8999998 99999999999999999998875 468889898863
No 445
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.71 E-value=4.7e-05 Score=57.64 Aligned_cols=55 Identities=22% Similarity=0.441 Sum_probs=41.1
Q ss_pred EEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHH----HHHhCCCCcccEEEEEeCCee
Q 010469 114 MVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE----LAHEYDVQGFPTIYFFVDGQH 179 (510)
Q Consensus 114 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~----~~~~~~v~~~P~~~~~~~g~~ 179 (510)
++.|+++||++|++..+.|.+. ++.+..+|+++++. +.+.+++.++|++ +.+|..
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~---------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~ 66 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARK---------GAEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVH 66 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT---------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEE
T ss_pred EEEEECCCChhHHHHHHHHHHc---------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 7789999999999998888753 35666777776553 4457899999975 457753
No 446
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=97.71 E-value=1.4e-05 Score=59.53 Aligned_cols=40 Identities=13% Similarity=0.082 Sum_probs=34.3
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCc
Q 010469 456 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE 498 (510)
Q Consensus 456 lv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~ 498 (510)
++.|+++||++|+.+.+.+.+++.... ++.+..+|++.+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~---~i~~~~vdi~~~~ 42 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD---DFQYQYVDIRAEG 42 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS---SCEEEEECHHHHT
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC---CceEEEEecccCh
Confidence 678999999999999999999988765 4888999986543
No 447
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.69 E-value=4.7e-05 Score=67.74 Aligned_cols=43 Identities=23% Similarity=0.370 Sum_probs=37.8
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
.+++|||+|||+||++|+ .+|.++++.+.+++ .++.++-|+++
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~-~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKP-YGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGG-GTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhcc-CCeEEEEEEcc
Confidence 368999999999999999 89999999999875 46888888875
No 448
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.67 E-value=0.00045 Score=59.12 Aligned_cols=89 Identities=11% Similarity=0.183 Sum_probs=67.4
Q ss_pred hCCCeEEEEEECCCChHHhhhhHHH---HHHHHHHhhcCCCeEEEEEeCcccH---------------HHHH---hCCCC
Q 010469 108 ENNKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVDATEEN---------------ELAH---EYDVQ 166 (510)
Q Consensus 108 ~~~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~~~~---------------~~~~---~~~v~ 166 (510)
.+.|+++|+++++||..|..+.... +++.+-++. ++.+...|.+... .++. .+++.
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~---nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~ 129 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ---NFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTD 129 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH---TEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCST
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc---CEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCC
Confidence 3578999999999999999987432 335555555 6889898887654 3443 38999
Q ss_pred cccEEEEEe-CC----eeeeecCCCCHHHHHHHHHHHc
Q 010469 167 GFPTIYFFV-DG----QHKAYNGGRTKDAIVTWIKKKI 199 (510)
Q Consensus 167 ~~P~~~~~~-~g----~~~~y~g~~~~~~l~~~i~~~~ 199 (510)
++|++.++. .| ...+..|..+.+.+.+.+...+
T Consensus 130 ~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 130 QFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp TCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 999999994 22 3457899999999988887654
No 449
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=97.64 E-value=9.1e-06 Score=75.28 Aligned_cols=28 Identities=21% Similarity=0.307 Sum_probs=24.8
Q ss_pred cEEEEEeCCCChhhhhhhHHHHHHHHHh
Q 010469 454 DVLLEIYAPWCGHCQAFEPTYNKLAKHL 481 (510)
Q Consensus 454 ~vlv~f~~~~c~~C~~~~~~~~~~a~~~ 481 (510)
..+|+||||||++|+++.|.++++++.+
T Consensus 199 ~~vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 199 IGGTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp TTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 3478999999999999999999998655
No 450
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.63 E-value=2.5e-05 Score=63.31 Aligned_cols=72 Identities=14% Similarity=0.381 Sum_probs=46.4
Q ss_pred hhcHHHHHhCCCeEEEEEECCCChHHhhh-hHHHHHHHHHHhhcCCCeEEEEEeCccc-----HHHHHhCCCCcccEEEE
Q 010469 100 ERNFSDVIENNKFVMVEFYAPWCGHCQAL-APEYAAAATELKSANESVVLAKVDATEE-----NELAHEYDVQGFPTIYF 173 (510)
Q Consensus 100 ~~~~~~~~~~~~~~~v~f~a~wC~~C~~~-~p~~~~~~~~~~~~~~~v~~~~vd~~~~-----~~~~~~~~v~~~P~~~~ 173 (510)
.+.+++.+...+ ++.|+.+|||+|++. .+.|.++... ...+.++.||.+.+ ..+.+.+|..++|++
T Consensus 27 ~~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~----~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v-- 98 (129)
T 3ctg_A 27 VAHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNVP----KSKALVLELDEMSNGSEIQDALEEISGQKTVPNV-- 98 (129)
T ss_dssp HHHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCCC----GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--
T ss_pred HHHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCcc----CCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--
Confidence 345666665554 677999999999999 7777654210 02344444443322 357778899999996
Q ss_pred EeCCee
Q 010469 174 FVDGQH 179 (510)
Q Consensus 174 ~~~g~~ 179 (510)
|.+|..
T Consensus 99 fi~g~~ 104 (129)
T 3ctg_A 99 YINGKH 104 (129)
T ss_dssp EETTEE
T ss_pred EECCEE
Confidence 557753
No 451
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.61 E-value=7.6e-05 Score=59.08 Aligned_cols=66 Identities=17% Similarity=0.385 Sum_probs=45.2
Q ss_pred hhcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc--c-----HHHHHhCCCCcccEEE
Q 010469 100 ERNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATE--E-----NELAHEYDVQGFPTIY 172 (510)
Q Consensus 100 ~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~--~-----~~~~~~~~v~~~P~~~ 172 (510)
.+.+++.++.++ ++.|+++|||+|++..+.|.+. ++.+-.+|.+. + ..+.+..|..++|+++
T Consensus 7 ~~~~~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~---------~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vf 75 (114)
T 3h8q_A 7 RRHLVGLIERSR--VVIFSKSYCPHSTRVKELFSSL---------GVECNVLELDQVDDGARVQEVLSEITNQKTVPNIF 75 (114)
T ss_dssp HHHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHT---------TCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEE
T ss_pred HHHHHHHhccCC--EEEEEcCCCCcHHHHHHHHHHc---------CCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEE
Confidence 345667776655 4449999999999999988763 24445555553 2 2345667889999985
Q ss_pred EEeCCe
Q 010469 173 FFVDGQ 178 (510)
Q Consensus 173 ~~~~g~ 178 (510)
+ +|+
T Consensus 76 i--~g~ 79 (114)
T 3h8q_A 76 V--NKV 79 (114)
T ss_dssp E--TTE
T ss_pred E--CCE
Confidence 5 674
No 452
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=97.59 E-value=0.00032 Score=66.51 Aligned_cols=98 Identities=13% Similarity=0.180 Sum_probs=66.2
Q ss_pred EEeChhcHHHHHhCCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc-------------------
Q 010469 96 VVLKERNFSDVIENNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE------------------- 155 (510)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~------------------- 155 (510)
...+++.+...--.||+++++|| +.||+.|..+++.|.+. . ..++.++.|+.+.
T Consensus 10 ~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~--~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~ 83 (322)
T 4eo3_A 10 LTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSRE----N--FEKAQVVGISRDSVEALKRFKEKNDLKVTLLS 83 (322)
T ss_dssp EETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHHS----C--CTTEEEEEEESCCHHHHHHHHHHHTCCSEEEE
T ss_pred ECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHH----h--hCCCEEEEEeCCCHHHHHHHHHhhCCceEEEE
Confidence 33444443332236889999999 57999999998888541 1 2357788887652
Q ss_pred --cHHHHHhCCCC----cccEEEEEe-CCe-eeeecCC---CCHHHHHHHHHHHc
Q 010469 156 --ENELAHEYDVQ----GFPTIYFFV-DGQ-HKAYNGG---RTKDAIVTWIKKKI 199 (510)
Q Consensus 156 --~~~~~~~~~v~----~~P~~~~~~-~g~-~~~y~g~---~~~~~l~~~i~~~~ 199 (510)
+.++++.|||. .+|++++++ +|+ ...|.+. ...+++.+++++..
T Consensus 84 D~~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~~ 138 (322)
T 4eo3_A 84 DPEGILHEFFNVLENGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRLI 138 (322)
T ss_dssp CTTCHHHHHTTCEETTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHHH
T ss_pred cCchHHHHhcCCCCCCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhhc
Confidence 23678889984 578999996 773 3445543 34688888888775
No 453
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.58 E-value=7e-05 Score=66.28 Aligned_cols=43 Identities=23% Similarity=0.156 Sum_probs=37.3
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
.+++|||+|||+||++| ..+|.+.++.+.+++ .++.++-|+++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~-~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAP-FGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGG-GTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhcc-CCEEEEEEECc
Confidence 36899999999999999 688999999999975 46888888865
No 454
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=97.58 E-value=6.8e-05 Score=65.92 Aligned_cols=45 Identities=13% Similarity=0.084 Sum_probs=39.7
Q ss_pred cCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.++++||+|| ++||++|....|.+.++++.++. .++.++.|+++.
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~d~ 78 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRK-LGCEVLGVSVDS 78 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT-TTEEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEECCC
Confidence 3689999999 99999999999999999999875 468999998864
No 455
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=97.57 E-value=5.3e-05 Score=66.01 Aligned_cols=44 Identities=16% Similarity=0.133 Sum_probs=39.1
Q ss_pred CCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
++++||+|| ++||++|..+.|.+.++++.++. .++.++.|+++.
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~vs~d~ 75 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKK-LGVEVYSVSTDT 75 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHH-TTEEEEEEESSC
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHHHHH-cCCEEEEEECCC
Confidence 689999999 99999999999999999998875 368888888764
No 456
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.56 E-value=6e-05 Score=66.19 Aligned_cols=44 Identities=11% Similarity=0.132 Sum_probs=39.3
Q ss_pred CCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
++++||+|| ++||++|+...|.+.++.+.++. .++.++.|+++.
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Vs~d~ 89 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFED-RDAQILGVSIDS 89 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHT-TTEEEEEEESSC
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHH-CCCEEEEEECCC
Confidence 689999999 99999999999999999999875 368889898764
No 457
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.55 E-value=3.8e-05 Score=61.01 Aligned_cols=37 Identities=16% Similarity=0.461 Sum_probs=27.7
Q ss_pred CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 453 KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 453 ~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
+.+++ ||++||++|+.+.|.+.+++. .+.++.+|.+.
T Consensus 20 ~~vv~-f~a~~C~~C~~~~~~l~~~~~------~~~~v~v~~~~ 56 (116)
T 2e7p_A 20 APVVV-FSKTYCGYCNRVKQLLTQVGA------SYKVVELDELS 56 (116)
T ss_dssp SSEEE-EECTTCHHHHHHHHHHHHHTC------CCEEEEGGGST
T ss_pred CCEEE-EECCCChhHHHHHHHHHHcCC------CeEEEEccCCC
Confidence 45666 999999999999999988743 24566666543
No 458
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.54 E-value=5.5e-05 Score=64.93 Aligned_cols=46 Identities=15% Similarity=0.281 Sum_probs=39.2
Q ss_pred cCCcEEEEEeCCCCh-hhhhhhHHHHHHHHHhcCCC-cEEEEEEeCCC
Q 010469 451 ESKDVLLEIYAPWCG-HCQAFEPTYNKLAKHLRGVD-SIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~-~C~~~~~~~~~~a~~~~~~~-~~~~~~id~~~ 496 (510)
.++++||+||++||+ +|....|.+.++.+.++... ++.++.|+++.
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~ 79 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDP 79 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCC
Confidence 368999999999999 99999999999999886522 48888888764
No 459
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.52 E-value=9.9e-05 Score=62.89 Aligned_cols=43 Identities=19% Similarity=0.383 Sum_probs=37.9
Q ss_pred cCCcEEEEEeCCC-ChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYAPW-CGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~-c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.+++++|.||++| |++|+...|.+.++.+.+ . ++.++.|+.+.
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~--~~~vv~is~d~ 86 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G--DVNVYTISADL 86 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S--SCEEEEEECSS
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C--CCEEEEEECCC
Confidence 3679999999999 999999999999999988 3 68888888764
No 460
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=97.52 E-value=5.2e-05 Score=66.76 Aligned_cols=45 Identities=11% Similarity=0.176 Sum_probs=39.4
Q ss_pred cCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.+++++|+|| ++||++|+.+.|.+.++.+.++. .++.++.|+++.
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~d~ 77 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHE-KGFNVIGVSIDS 77 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHH-TTEEEEEEESSC
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHH-cCCEEEEEECCC
Confidence 3689999999 99999999999999999998865 368888888764
No 461
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.52 E-value=0.0002 Score=62.53 Aligned_cols=40 Identities=18% Similarity=0.422 Sum_probs=31.6
Q ss_pred CCeEEEEEECCCChHHhhhhHHH---HHHHHHHhhcCCCeEEEEEe
Q 010469 110 NKFVMVEFYAPWCGHCQALAPEY---AAAATELKSANESVVLAKVD 152 (510)
Q Consensus 110 ~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd 152 (510)
++++||.|+..|||+|+++.|.+ .++.+.+.+ ++.+..++
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~---~v~~~~~~ 63 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE---GTKMTKYH 63 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT---TCCEEEEE
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCC---CcEEEEEe
Confidence 36889999999999999999986 688888765 34444444
No 462
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.50 E-value=0.00018 Score=56.32 Aligned_cols=66 Identities=17% Similarity=0.343 Sum_probs=47.5
Q ss_pred hhcHHHHHhCCCeEEEEEEC-----CCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccHH----HHHhCCCCcccE
Q 010469 100 ERNFSDVIENNKFVMVEFYA-----PWCGHCQALAPEYAAAATELKSANESVVLAKVDATEENE----LAHEYDVQGFPT 170 (510)
Q Consensus 100 ~~~~~~~~~~~~~~~v~f~a-----~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~----~~~~~~v~~~P~ 170 (510)
.+.+++++..++ ++.|+. +||++|++..+.|.+. ++.+..+|.+.++. +.+..+..++|+
T Consensus 5 ~~~~~~~i~~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~---------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~ 73 (109)
T 1wik_A 5 SSGLKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNST---------GVEYETFDILEDEEVRQGLKTFSNWPTYPQ 73 (109)
T ss_dssp CCCHHHHHTTSS--EEEEESSTTTCCCSSTHHHHHHHHHHT---------CSCEEEEESSSCHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHHhccCC--EEEEEecCCCCCCCchHHHHHHHHHHc---------CCCeEEEECCCCHHHHHHHHHHhCCCCCCE
Confidence 345777776665 445666 9999999999988753 36778888887764 344568889998
Q ss_pred EEEEeCCe
Q 010469 171 IYFFVDGQ 178 (510)
Q Consensus 171 ~~~~~~g~ 178 (510)
+ |.+|.
T Consensus 74 i--fi~g~ 79 (109)
T 1wik_A 74 L--YVRGD 79 (109)
T ss_dssp E--ECSSS
T ss_pred E--EECCE
Confidence 5 55664
No 463
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.47 E-value=0.00011 Score=65.89 Aligned_cols=45 Identities=11% Similarity=0.174 Sum_probs=39.3
Q ss_pred cCCcEEEEEeC-CCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~-~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.++++||+||+ +||++|....|.+.++.+.+++ .++.|+.|+++.
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~-~~v~vv~Is~D~ 113 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNS-RNCQVIACSTDS 113 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHT-TTEEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHH-CCCEEEEEECCC
Confidence 36899999996 9999999999999999999975 468888888764
No 464
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.47 E-value=0.00017 Score=63.30 Aligned_cols=45 Identities=31% Similarity=0.454 Sum_probs=40.0
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN 497 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n 497 (510)
+++++|+.||++||++|+.+.|.+.++.+.+.+ ++.|..+++..+
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~~~~~~ 68 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ--DVVLKQVPIAFN 68 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECCSS
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC--CeEEEEEecccC
Confidence 467899999999999999999999999998876 799999998754
No 465
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=97.45 E-value=0.00012 Score=64.67 Aligned_cols=44 Identities=11% Similarity=0.079 Sum_probs=39.2
Q ss_pred CCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
++++||+|| ++||++|....|.+.++.+.++. .++.|+.|+++.
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~-~~v~vi~Is~D~ 80 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSD-IGCEVLACSMDS 80 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHT-TTEEEEEEESSC
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHH-CCCEEEEEeCCC
Confidence 689999999 99999999999999999999865 468899998864
No 466
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.45 E-value=0.00011 Score=64.73 Aligned_cols=46 Identities=9% Similarity=-0.041 Sum_probs=37.5
Q ss_pred cCCcEEEEEeCCCChh-hhhhhHHHHHHHHHhcC--CCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRG--VDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~-C~~~~~~~~~~a~~~~~--~~~~~~~~id~~~ 496 (510)
.++++||+||++||++ |....|.+.++.+.+.. ..++.++.|+++.
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~ 88 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP 88 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC
Confidence 3689999999999998 99999999998887752 1367777777764
No 467
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=97.39 E-value=9.3e-05 Score=64.75 Aligned_cols=45 Identities=16% Similarity=0.167 Sum_probs=39.1
Q ss_pred cCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.++++||+|| ++||++|....|.+.++++.++. .++.++.|+++.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~Is~d~ 75 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKE-RNVELLGCSVDS 75 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHH-TTEEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEEeCC
Confidence 3679999999 99999999999999999998864 368888888763
No 468
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.39 E-value=0.00017 Score=64.17 Aligned_cols=44 Identities=9% Similarity=0.116 Sum_probs=38.9
Q ss_pred CCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
++++||+|| ++||++|...+|.+.++.+.++. .++.++.|+++.
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~-~~v~vv~Is~D~ 92 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS-INTEVVACSVDS 92 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT-TTEEEEEEESSC
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEECCC
Confidence 679999999 99999999999999999999865 478888888753
No 469
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.39 E-value=0.00012 Score=65.14 Aligned_cols=45 Identities=16% Similarity=0.147 Sum_probs=39.1
Q ss_pred cCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.++++||+|| ++||++|....|.+.++++.++. .++.++.|+++.
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~D~ 96 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHE-RNVELLGCSVDS 96 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHH-TTEEEEEEESSC
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCC
Confidence 3679999999 99999999999999999999864 368888888763
No 470
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.38 E-value=0.00016 Score=61.34 Aligned_cols=43 Identities=9% Similarity=0.059 Sum_probs=37.1
Q ss_pred CCcEEEEEeC-CCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 452 SKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 452 ~~~vlv~f~~-~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
+++++|+||+ +||++|....|.+.++.+.++. .++.++.|.++
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~-~~~~vv~vs~d 78 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDK-AGAKILGVSRD 78 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHH-TTCEEEEEESS
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHH-CCCEEEEEeCC
Confidence 5789999998 9999999999999999998865 35777777775
No 471
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.35 E-value=0.00026 Score=61.90 Aligned_cols=46 Identities=24% Similarity=0.472 Sum_probs=40.6
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCc
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE 498 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~ 498 (510)
+++.+||.|++.||++|+.+.|.+.++.+.+.+ ++.|..+++..++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~--~v~~~~~p~~~~~ 68 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD--DMYLRTEHVVWQK 68 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT--TEEEEEEECCCSG
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC--CeEEEEecCCCCc
Confidence 457899999999999999999999999988876 7999999987554
No 472
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.35 E-value=0.00013 Score=65.28 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=38.8
Q ss_pred cCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.++++||+|| ++||++|....|.+.++.+.++. .++.++.|+++.
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~-~~v~vv~Is~D~ 100 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFEN-KNVELLGISVDS 100 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHH-TTEEEEEEESSC
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHH-CCCEEEEEeCCC
Confidence 3679999999 99999999999999999998864 468888888753
No 473
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.34 E-value=0.0019 Score=56.70 Aligned_cols=88 Identities=19% Similarity=0.313 Sum_probs=64.6
Q ss_pred CCCeEEEEEECCCChHHhhhhHHH-HHHHHHHhhcCCCeEEEEEeCcccH------------------------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPEY-AAAATELKSANESVVLAKVDATEEN------------------------------ 157 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~~-~~~~~~~~~~~~~v~~~~vd~~~~~------------------------------ 157 (510)
..+++||.|+...||+|+++.+.+ ..+.+.|.+. .++.|...+..-.+
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~-g~v~~~~~~~p~~~~~s~~Aa~aa~a~~~~~~~~f~~~~~aLf~ 106 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDK-GDVKFSFVNVMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFE 106 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTT-TSEEEEEEECCCSHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccC-CeEEEEEEecCccchhHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 457899999999999999999886 5565666431 25777766532110
Q ss_pred -----------------------------------------------HHHHhCCCCcccEEEEEeCCeeeeecCCCCHHH
Q 010469 158 -----------------------------------------------ELAHEYDVQGFPTIYFFVDGQHKAYNGGRTKDA 190 (510)
Q Consensus 158 -----------------------------------------------~~~~~~~v~~~P~~~~~~~g~~~~y~g~~~~~~ 190 (510)
..++++||.++|++++ +|+. +.|..+.+.
T Consensus 107 ~~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~gV~gtPtfvv--nG~~--~~G~~~~e~ 182 (202)
T 3gha_A 107 KQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYV--NDKV--IKNFADYDE 182 (202)
T ss_dssp HCCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTTHHHHHHHHHHHHHTTCCSSCEEEE--TTEE--CSCTTCHHH
T ss_pred hCccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEE--ecCCCCHHH
Confidence 3345689999999987 7764 678899999
Q ss_pred HHHHHHHHcCC
Q 010469 191 IVTWIKKKIGP 201 (510)
Q Consensus 191 l~~~i~~~~~~ 201 (510)
|.+.|.+.+..
T Consensus 183 l~~~i~~~~~~ 193 (202)
T 3gha_A 183 IKETIEKELKG 193 (202)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999877643
No 474
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=97.34 E-value=0.00016 Score=64.74 Aligned_cols=44 Identities=11% Similarity=0.144 Sum_probs=39.0
Q ss_pred CCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
++++||+|| ++||++|+...|.+.++.+.++. .++.++.|+++.
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~-~~v~vv~Is~D~ 100 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHD-VNCEVVAVSVDS 100 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHH-TTEEEEEEESSC
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEECCC
Confidence 589999999 99999999999999999999864 468888888764
No 475
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.32 E-value=0.0015 Score=57.56 Aligned_cols=88 Identities=14% Similarity=0.333 Sum_probs=63.9
Q ss_pred CCCeEEEEEE-CCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcc----------------------------cHHH
Q 010469 109 NNKFVMVEFY-APWCGHCQALAPEYAAAATELKSANESVVLAKVDATE----------------------------ENEL 159 (510)
Q Consensus 109 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~~ 159 (510)
.++++|++|| +.||+.|..+...|.+.+.+++.. ++.++.|.++. +.++
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~--g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~v 132 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNEL--NCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNI 132 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTT--TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccC--CcEEEEeeCCchhhHHHHhhhhHHhcCccccccccccCcccHH
Confidence 5789999999 899999999999999999999884 57777777653 2367
Q ss_pred HHhCCCC----c--ccEEEEEe-CCee-ee--e--cCCCCHHHHHHHHHHH
Q 010469 160 AHEYDVQ----G--FPTIYFFV-DGQH-KA--Y--NGGRTKDAIVTWIKKK 198 (510)
Q Consensus 160 ~~~~~v~----~--~P~~~~~~-~g~~-~~--y--~g~~~~~~l~~~i~~~ 198 (510)
++.||+- + +-.+++++ +|++ .. | .-.++.+++.+.|+..
T Consensus 133 a~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 133 ARSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAF 183 (219)
T ss_dssp HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHHcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHh
Confidence 8888873 2 34677776 6632 22 2 2346777777777654
No 476
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.30 E-value=0.00034 Score=60.34 Aligned_cols=44 Identities=9% Similarity=0.061 Sum_probs=37.6
Q ss_pred CCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
+++++|+|| +.||++|...+|.+.++.+.++. .++.++.|.++.
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~-~~~~vv~Vs~D~ 95 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQ-INATVLGVSRDS 95 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHT-TTEEEEEEESCC
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHH-CCCEEEEEcCCC
Confidence 578888888 99999999999999999999975 468888887653
No 477
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.24 E-value=0.00028 Score=60.09 Aligned_cols=44 Identities=20% Similarity=0.255 Sum_probs=35.9
Q ss_pred cCCcEEEEEe-CCCChhhhh-hhHHHHHHHHHhcCCCcE-EEEEEeCC
Q 010469 451 ESKDVLLEIY-APWCGHCQA-FEPTYNKLAKHLRGVDSI-VIAKMDGT 495 (510)
Q Consensus 451 ~~~~vlv~f~-~~~c~~C~~-~~~~~~~~a~~~~~~~~~-~~~~id~~ 495 (510)
.+++++|+|| ++||++|.. ..|.+.++.+.++. .++ .++-|+.+
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~-~gv~~vv~Is~d 76 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHG-KGVDIIACMAVN 76 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHH-TTCCEEEEEESS
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCEEEEEeCC
Confidence 3567888775 999999999 99999999988864 367 78888765
No 478
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.23 E-value=0.0003 Score=59.73 Aligned_cols=42 Identities=21% Similarity=0.347 Sum_probs=36.7
Q ss_pred CCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
++++||+|| +.||++|...+|.+.++.+.+ . ++.++.|+.+.
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~--~v~vv~Is~d~ 85 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S--NTIVLCISADL 85 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T--TEEEEEEESSC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C--CCEEEEEeCCC
Confidence 678999999 899999999999999999888 3 68888888753
No 479
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.23 E-value=0.00026 Score=59.99 Aligned_cols=44 Identities=18% Similarity=0.282 Sum_probs=36.2
Q ss_pred cCCcEEEEEe-CCCChhhh-hhhHHHHHHHHHhcCCCcEE-EEEEeCC
Q 010469 451 ESKDVLLEIY-APWCGHCQ-AFEPTYNKLAKHLRGVDSIV-IAKMDGT 495 (510)
Q Consensus 451 ~~~~vlv~f~-~~~c~~C~-~~~~~~~~~a~~~~~~~~~~-~~~id~~ 495 (510)
.+++++|+|| +.||++|. ...|.+.++.+.+++ .++. ++-|+.+
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~-~~v~~vv~Is~d 80 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKS-KGVTEILCISVN 80 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHH-TTCCCEEEEESS
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCEEEEEECC
Confidence 3678999999 89999999 899999999998864 3566 6667654
No 480
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.23 E-value=0.00026 Score=60.77 Aligned_cols=41 Identities=20% Similarity=0.278 Sum_probs=36.0
Q ss_pred CCcEEEEEeCCC-ChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SKDVLLEIYAPW-CGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~~~~-c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
++++||+||++| |++|+...|.+.++.+. . ++.|+.|+++.
T Consensus 44 gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~---~v~vv~Is~D~ 85 (175)
T 1xvq_A 44 GKSVLLNIFPSVDTPVCATSVRTFDERAAA-S---GATVLCVSKDL 85 (175)
T ss_dssp TSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T---TCEEEEEESSC
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c---CCEEEEEECCC
Confidence 679999999999 99999999999999887 3 68888888753
No 481
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.21 E-value=0.00032 Score=60.93 Aligned_cols=44 Identities=7% Similarity=-0.032 Sum_probs=37.9
Q ss_pred CCcEEEEEeC-CCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~~-~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
++++||+||+ +||++|...+|.+.++.+.++. .++.++.|.++.
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~-~~v~vv~Is~d~ 74 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQK-LGVDVYSVSTDT 74 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHH-TTEEEEEEESSC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHH-CCCEEEEEECCC
Confidence 6899999995 9999999999999999998864 468888888753
No 482
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=97.15 E-value=0.00038 Score=58.98 Aligned_cols=43 Identities=16% Similarity=0.230 Sum_probs=36.7
Q ss_pred cCCcEEEEEeC-CCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~-~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.+++++|+||+ .||++|....|.+.++.+.+ . ++.++.|+.+.
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~--~v~vv~is~d~ 84 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D--NTVVLTVSMDL 84 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T--TEEEEEEESSC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C--CcEEEEEECCC
Confidence 36799999995 99999999999999998887 3 78888888753
No 483
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.14 E-value=0.00017 Score=61.81 Aligned_cols=42 Identities=14% Similarity=0.329 Sum_probs=34.2
Q ss_pred CcEEEEEeCCCChhhhhh-hHHHHHHHHHhcCCCcEE-EEEEeCC
Q 010469 453 KDVLLEIYAPWCGHCQAF-EPTYNKLAKHLRGVDSIV-IAKMDGT 495 (510)
Q Consensus 453 ~~vlv~f~~~~c~~C~~~-~~~~~~~a~~~~~~~~~~-~~~id~~ 495 (510)
+.||++||++||++|... +|.+.++.+.++. .++. ++-|+.+
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~-~g~~~vv~Is~d 88 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKA-KGVDSVICVAIN 88 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHH-TTCSEEEEEESS
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHH-CCCCEEEEEeCC
Confidence 367778999999999998 9999999988864 3566 7777765
No 484
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.14 E-value=0.00065 Score=57.20 Aligned_cols=41 Identities=7% Similarity=0.126 Sum_probs=33.8
Q ss_pred CcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 453 KDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 453 ~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
++++|+|| ++||++|....|.+.++.+.++.. + .++.|+++
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~-~-~vv~is~d 77 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEY-A-AVFGLSAD 77 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTT-C-EEEEEESC
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhC-C-cEEEEeCC
Confidence 37888887 999999999999999999999763 3 66666655
No 485
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.14 E-value=0.0004 Score=59.33 Aligned_cols=42 Identities=5% Similarity=0.048 Sum_probs=36.5
Q ss_pred CCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
+++++|+|| +.||++|....|.+.++.+.+ . ++.++.|.++.
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~--~v~vv~Is~d~ 89 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM-E--GVDVTVVSMDL 89 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T--TEEEEEEESSC
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C--CceEEEEeCCC
Confidence 678999999 899999999999999998888 3 78888888753
No 486
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.13 E-value=0.00052 Score=58.59 Aligned_cols=45 Identities=13% Similarity=0.198 Sum_probs=37.6
Q ss_pred CCcEEEEEeCCCCh-hhhhhhHHHHHHHHHhcC-CCcEEEEEEeCCC
Q 010469 452 SKDVLLEIYAPWCG-HCQAFEPTYNKLAKHLRG-VDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~~~~c~-~C~~~~~~~~~~a~~~~~-~~~~~~~~id~~~ 496 (510)
+++++|+||++||+ .|....+.+.++.+.++. ..++.++.|.++.
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~ 74 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDP 74 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCT
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCC
Confidence 78999999999997 699999999999999853 2357777777764
No 487
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.09 E-value=0.00045 Score=59.78 Aligned_cols=43 Identities=19% Similarity=0.277 Sum_probs=34.0
Q ss_pred CCc-EEEEEeCCCChhhhh-hhHHHHHHHHHhcCCCcEE-EEEEeCC
Q 010469 452 SKD-VLLEIYAPWCGHCQA-FEPTYNKLAKHLRGVDSIV-IAKMDGT 495 (510)
Q Consensus 452 ~~~-vlv~f~~~~c~~C~~-~~~~~~~~a~~~~~~~~~~-~~~id~~ 495 (510)
+++ ||++||+.||++|.. .+|.|.++++.++. .++. ++-|+.+
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~-~gv~~vv~Is~d 101 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILA-RGVDDIAVVAVN 101 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHT-TTCCEEEEEESS
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHH-cCCCEEEEEECC
Confidence 554 556677999999999 79999999999875 3566 7777764
No 488
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.04 E-value=0.00058 Score=62.03 Aligned_cols=44 Identities=20% Similarity=0.356 Sum_probs=37.3
Q ss_pred cCCcEEEEEe-CCCChhhh-hhhHHHHHHHHHhcCCCcE-EEEEEeCC
Q 010469 451 ESKDVLLEIY-APWCGHCQ-AFEPTYNKLAKHLRGVDSI-VIAKMDGT 495 (510)
Q Consensus 451 ~~~~vlv~f~-~~~c~~C~-~~~~~~~~~a~~~~~~~~~-~~~~id~~ 495 (510)
.+++++|+|| ++||++|. ..+|.+.++.+.++. .++ .++-|+.+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~-~~~~~vv~is~d 78 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKK-YGVDDILVVSVN 78 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHH-TTCCEEEEEESS
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCEEEEEEcC
Confidence 3678999998 99999999 999999999998864 367 77778765
No 489
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.01 E-value=0.00081 Score=60.91 Aligned_cols=44 Identities=9% Similarity=0.138 Sum_probs=38.7
Q ss_pred CCcEEEEEeC-CCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~~-~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
++++||+||+ .||++|...+|.+.++.+.++. .++.++.|.++.
T Consensus 77 Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~-~gv~vv~Is~D~ 121 (240)
T 3qpm_A 77 GKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRA-INTEVVACSVDS 121 (240)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHT-TTEEEEEEESSC
T ss_pred CCEEEEEEECCCCCCchHHHHHHHHHHHHHHHH-CCCEEEEEECCC
Confidence 6899999999 9999999999999999999975 468888888754
No 490
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.01 E-value=0.00013 Score=61.56 Aligned_cols=43 Identities=19% Similarity=0.248 Sum_probs=30.3
Q ss_pred CCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 010469 452 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 495 (510)
Q Consensus 452 ~~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~ 495 (510)
+++++|.|| ++||++|...+|.+.++.+.++. .++.++.|+.+
T Consensus 30 Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~-~~~~~v~vs~d 73 (157)
T 4g2e_A 30 GKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQ-VNAVVLGISVD 73 (157)
T ss_dssp TSCEEEEECSCTTCCC------CCSCGGGGGGG-CSSEEEEEESS
T ss_pred CCeEEEEecCCCCCCccccchhhcccccccccc-cCceEeeeccc
Confidence 678999998 99999999999999988888865 46777777764
No 491
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.01 E-value=0.00042 Score=50.79 Aligned_cols=35 Identities=9% Similarity=0.084 Sum_probs=28.2
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCc
Q 010469 456 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE 498 (510)
Q Consensus 456 lv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~ 498 (510)
++.|+++||++|+.+++.+.+. ++.+..+|++.++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~--------~i~~~~vdi~~~~ 37 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR--------GFDFEMINVDRVP 37 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCH
T ss_pred EEEEcCCCChhHHHHHHHHHHC--------CCCeEEEECCCCH
Confidence 5679999999999999998863 3566778887654
No 492
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=96.98 E-value=0.0048 Score=55.12 Aligned_cols=93 Identities=14% Similarity=0.251 Sum_probs=64.2
Q ss_pred CCCeEEEEEECCCChHHhhhhHH-HHHHHHHHhhcCCCeEEEEEeCcccH------------------------------
Q 010469 109 NNKFVMVEFYAPWCGHCQALAPE-YAAAATELKSANESVVLAKVDATEEN------------------------------ 157 (510)
Q Consensus 109 ~~~~~~v~f~a~wC~~C~~~~p~-~~~~~~~~~~~~~~v~~~~vd~~~~~------------------------------ 157 (510)
+.+++|+.|+...||+|+++.+. +.++.+++-+. .++.+...+..-.+
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~-g~V~~v~~~~p~~~~s~~Aa~aa~aa~~~~~f~~~~~aLF~~q~ 116 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDT-GKMLYIFRHFPLDYRGLKAAMLSHCYEKQEDYFNFNKAVFNSID 116 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTT-TSEEEEEEECCCSHHHHHHHHHGGGCCSHHHHHHHHHHHHHTGG
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccC-CeEEEEEEeCCCChhHHHHHHHHHHhhChHHHHHHHHHHHHhCH
Confidence 45788999999999999999986 47777777331 15666554421000
Q ss_pred --------------------------------------------HHHHh-CCCCcccEEEEEe-CCeee------eecCC
Q 010469 158 --------------------------------------------ELAHE-YDVQGFPTIYFFV-DGQHK------AYNGG 185 (510)
Q Consensus 158 --------------------------------------------~~~~~-~~v~~~P~~~~~~-~g~~~------~y~g~ 185 (510)
..+++ +||.++|+++++. +|+.+ ...|.
T Consensus 117 ~~~~~~~~~~~~L~~iA~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~~GV~GtPtfvv~~~nG~~~~Ga~~~~~~G~ 196 (226)
T 3f4s_A 117 SWNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIVNDKSLAINKLGITAVPIFFIKLNDDKSYIEHNKVKHGGY 196 (226)
T ss_dssp GSCSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCTTCCCCGGGGEEESC
T ss_pred hhcccccCcHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHHcCCCcCCEEEEEcCCCEEeeCCCCcccccc
Confidence 34556 9999999999875 66421 23444
Q ss_pred CCHHHHHHHHHHHcCCC
Q 010469 186 RTKDAIVTWIKKKIGPG 202 (510)
Q Consensus 186 ~~~~~l~~~i~~~~~~~ 202 (510)
.+.+.+.+.|.+.+...
T Consensus 197 ~~~e~l~~~I~~~l~~~ 213 (226)
T 3f4s_A 197 KELKYFTNVIDKLYGKA 213 (226)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcC
Confidence 55999999998877543
No 493
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=96.97 E-value=0.0012 Score=57.48 Aligned_cols=44 Identities=25% Similarity=0.436 Sum_probs=38.1
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
+++.+|+.|+.+||++|+.+.|.+.++.+.+.. ++.|..+.+..
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~~~ 67 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA--DVHFVRLPALF 67 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECCC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC--CeEEEEEehhh
Confidence 457899999999999999999999999988876 78888777653
No 494
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=96.93 E-value=0.0016 Score=52.23 Aligned_cols=70 Identities=10% Similarity=0.216 Sum_probs=45.1
Q ss_pred hcHHHHHhCCCeEEEEEECCCChHHhhhhHHHHHHHHHHhhcCCCeEEEEEeCcccH-H----HHHhCCCCcccEEEEEe
Q 010469 101 RNFSDVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKSANESVVLAKVDATEEN-E----LAHEYDVQGFPTIYFFV 175 (510)
Q Consensus 101 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~-~----~~~~~~v~~~P~~~~~~ 175 (510)
++|+++++.++ ++.|..+|||+|++....|.+. . ..+..+..+.||...++ . +.+..|.+.+|++++
T Consensus 5 ~~~~~ii~~~~--Vvvysk~~Cp~C~~ak~lL~~~---~-~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI-- 76 (127)
T 3l4n_A 5 KEYSLILDLSP--IIIFSKSTCSYSKGMKELLENE---Y-QFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLV-- 76 (127)
T ss_dssp HHHHHHHTSCS--EEEEECTTCHHHHHHHHHHHHH---E-EEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEE--
T ss_pred HHHHHHHccCC--EEEEEcCCCccHHHHHHHHHHh---c-ccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEE--
Confidence 56778776655 7788999999999999888763 1 10123455555543322 2 333458889999843
Q ss_pred CCe
Q 010469 176 DGQ 178 (510)
Q Consensus 176 ~g~ 178 (510)
+|+
T Consensus 77 ~G~ 79 (127)
T 3l4n_A 77 NGV 79 (127)
T ss_dssp TTE
T ss_pred CCE
Confidence 564
No 495
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=96.85 E-value=0.00092 Score=58.71 Aligned_cols=42 Identities=26% Similarity=0.376 Sum_probs=36.5
Q ss_pred CCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
+++++|+|| +.||++|....|.+.++.+.+ . ++.++.|.++.
T Consensus 78 Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~--~v~vv~Is~D~ 120 (200)
T 3zrd_A 78 GKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E--NTVVLCISSDL 120 (200)
T ss_dssp TSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T--TEEEEEEESSC
T ss_pred CCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C--CCEEEEEECCC
Confidence 678999999 789999999999999999988 3 68888888753
No 496
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=96.82 E-value=0.00095 Score=60.94 Aligned_cols=44 Identities=9% Similarity=0.116 Sum_probs=38.5
Q ss_pred CCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~-~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~ 496 (510)
++++||+|| +.||++|...+|.+.++.+.++. .++.++.|.++.
T Consensus 91 GK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~-~gv~vv~IS~D~ 135 (254)
T 3tjj_A 91 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS-INTEVVACSVDS 135 (254)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHT-TTEEEEEEESSC
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHH-cCCEEEEEcCCC
Confidence 678999999 99999999999999999999975 468888888764
No 497
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=96.77 E-value=0.00086 Score=48.11 Aligned_cols=35 Identities=14% Similarity=0.335 Sum_probs=28.0
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEeCCCCc
Q 010469 456 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE 498 (510)
Q Consensus 456 lv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id~~~n~ 498 (510)
++.|+++||++|+++++.+.++ ++.+..+|++.++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~--------~i~~~~~di~~~~ 37 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA--------GLAYNTVDISLDD 37 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCH
T ss_pred EEEEeCCCChHHHHHHHHHHHc--------CCCcEEEECCCCH
Confidence 5679999999999999998864 3566777887654
No 498
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.77 E-value=0.00059 Score=59.36 Aligned_cols=43 Identities=19% Similarity=0.367 Sum_probs=35.3
Q ss_pred CCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCCcEEEEEEeCCC
Q 010469 452 SKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTT 496 (510)
Q Consensus 452 ~~~vlv~f~~~~c~~C~~~~~~~---~~~a~~~~~~~~~~~~~id~~~ 496 (510)
.+++||.|++.||++|+.+.|.+ ..+.+.+.+ ++.|..+++..
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~ 59 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ--GSRMVKYHVSL 59 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT--TCCEEEEECSS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC--CCEEEEEechh
Confidence 36889999999999999999987 677777765 67777777765
No 499
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=96.72 E-value=0.0016 Score=55.49 Aligned_cols=45 Identities=13% Similarity=0.191 Sum_probs=35.7
Q ss_pred cCCcEEEEEeCCCCh-hhhhhhHHHHHHHHHhcC-CCcEEEEEEeCC
Q 010469 451 ESKDVLLEIYAPWCG-HCQAFEPTYNKLAKHLRG-VDSIVIAKMDGT 495 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~-~C~~~~~~~~~~a~~~~~-~~~~~~~~id~~ 495 (510)
.++++||+||++||+ .|...++.+.++.+.++. ..++.++.|.++
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC
Confidence 378999999999996 799999999988887743 235767766665
No 500
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=96.71 E-value=0.0008 Score=59.94 Aligned_cols=38 Identities=16% Similarity=0.317 Sum_probs=30.3
Q ss_pred cCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCCcEEEEEEe
Q 010469 451 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMD 493 (510)
Q Consensus 451 ~~~~vlv~f~~~~c~~C~~~~~~~~~~a~~~~~~~~~~~~~id 493 (510)
.++.+|+.||++||++|+++.|.+.++.+. ++.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~-----~v~v~~~~ 122 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL-----GITVRYLA 122 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT-----TEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC-----CcEEEEEE
Confidence 357899999999999999999999988652 35555444
Done!