BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>010474
MRSSSEGINIAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSS
LVTETIPCHRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWS
HASQNSTLEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLN
FPRPNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIK
TDSSNVEPEKSSVQSISTPNDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTE
VQDLIAAMSPQVTETECQVGNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETC
GILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSC
FMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGFHPHD
PPPDGGPIYKPCTDVYMNPNLKFDVIDLR

High Scoring Gene Products

Symbol, full name Information P value
AMSH1
AT1G48790
protein from Arabidopsis thaliana 3.8e-165
AMSH3
associated molecule with the SH3 domain of STAM 3
protein from Arabidopsis thaliana 1.6e-116
AMSH2
AT1G10600
protein from Arabidopsis thaliana 1.8e-55
DDB_G0284037
MPN/PAD-1 domain-containing protein
gene from Dictyostelium discoideum 1.3e-51
STAMBPL1
AMSH-like protease
protein from Homo sapiens 4.6e-46
MGG_13915
STAM-binding protein
protein from Magnaporthe oryzae 70-15 6.2e-46
STAMBP
Uncharacterized protein
protein from Sus scrofa 6.7e-45
STAMBP
Uncharacterized protein
protein from Bos taurus 1.8e-44
STAMBP
STAM-binding protein
protein from Homo sapiens 4.7e-44
Stambp
STAM binding protein
protein from Mus musculus 5.9e-44
Stambpl1
STAM binding protein like 1
protein from Mus musculus 7.6e-44
stambpa
STAM binding protein a
gene_product from Danio rerio 2.5e-43
stambpb
STAM binding protein b
gene_product from Danio rerio 2.5e-41
STAMBPL1
AMSH-like protease
protein from Homo sapiens 9.2e-36
Stambp
Stam binding protein
gene from Rattus norvegicus 5.1e-35
STAMBP
STAM-binding protein
protein from Homo sapiens 2.1e-13
psmD14
putative multidrug resistance protein
gene from Dictyostelium discoideum 2.4e-06
F37A4.5 gene from Caenorhabditis elegans 7.7e-05
STAMBP
STAM-binding protein
protein from Homo sapiens 0.00020
Rpn11
Regulatory particle non-ATPase 11
protein from Drosophila melanogaster 0.00020
rpn-11 gene from Caenorhabditis elegans 0.00021
rpn-11
26S proteasome non-ATPase regulatory subunit 14
protein from Caenorhabditis elegans 0.00021
MAL13P1.343
proteasome regulatory subunit, putative
gene from Plasmodium falciparum 0.00026
MAL13P1.343
Proteasome regulatory subunit, putative
protein from Plasmodium falciparum 3D7 0.00026
orf19.7264 gene_product from Candida albicans 0.00027
RPN11
Metalloprotease subunit of the 19S regulatory particle of the 26S pro
gene from Saccharomyces cerevisiae 0.00033
AT5G23540 protein from Arabidopsis thaliana 0.00056
PSMD14
Uncharacterized protein
protein from Gallus gallus 0.00089
PSMD14
Uncharacterized protein
protein from Bos taurus 0.00095
PSMD14
26S proteasome non-ATPase regulatory subunit 14
protein from Homo sapiens 0.00095
PSMD14
Uncharacterized protein
protein from Sus scrofa 0.00095
Psmd14
proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
protein from Mus musculus 0.00095
Psmd14
proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
gene from Rattus norvegicus 0.00095
psmd14
proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
gene_product from Danio rerio 0.00095

The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  010474
        (509 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2008184 - symbol:AMSH1 "AT1G48790" species:370...  1607  3.8e-165  1
TAIR|locus:504955440 - symbol:AMSH3 "associated molecule ...  1148  1.6e-116  1
TAIR|locus:2019903 - symbol:AMSH2 "AT1G10600" species:370...   572  1.8e-55   1
POMBASE|SPAC19B12.10 - symbol:sst2 "human AMSH/STAMBP pro...   463  1.1e-52   2
DICTYBASE|DDB_G0284037 - symbol:DDB_G0284037 "MPN/PAD-1 d...   415  1.3e-51   3
UNIPROTKB|Q96FJ0 - symbol:STAMBPL1 "AMSH-like protease" s...   386  4.6e-46   3
UNIPROTKB|G4N2G6 - symbol:MGG_13915 "STAM-binding protein...   390  6.2e-46   2
UNIPROTKB|F1SLF9 - symbol:STAMBP "Uncharacterized protein...   393  6.7e-45   2
UNIPROTKB|Q17QR2 - symbol:STAMBP "STAM binding protein" s...   395  1.8e-44   2
UNIPROTKB|O95630 - symbol:STAMBP "STAM-binding protein" s...   381  4.7e-44   2
MGI|MGI:1917777 - symbol:Stambp "STAM binding protein" sp...   382  5.9e-44   2
MGI|MGI:1923880 - symbol:Stambpl1 "STAM binding protein l...   387  7.6e-44   2
UNIPROTKB|E1BRS3 - symbol:Gga.34764 "Uncharacterized prot...   372  9.6e-44   2
ZFIN|ZDB-GENE-040426-1551 - symbol:stambpa "STAM binding ...   381  2.5e-43   2
ZFIN|ZDB-GENE-051127-31 - symbol:stambpb "STAM binding pr...   371  2.5e-41   2
ASPGD|ASPL0000038640 - symbol:AN3003 species:162425 "Emer...   431  1.6e-40   1
UNIPROTKB|B3KR00 - symbol:STAMBPL1 "cDNA FLJ33359 fis, cl...   386  9.2e-36   1
RGD|619963 - symbol:Stambp "Stam binding protein" species...   379  5.1e-35   1
UNIPROTKB|C9JK83 - symbol:STAMBP "STAM-binding protein" s...   145  2.1e-13   2
DICTYBASE|DDB_G0272566 - symbol:psmD14 "putative multidru...   137  2.4e-06   1
ASPGD|ASPL0000076795 - symbol:AN4492 species:162425 "Emer...   132  1.1e-05   1
POMBASE|SPAC31G5.13 - symbol:rpn11 "19S proteasome regula...   127  3.3e-05   1
WB|WBGene00018135 - symbol:F37A4.5 species:6239 "Caenorha...   124  7.7e-05   1
UNIPROTKB|C9JZ93 - symbol:STAMBP "STAM-binding protein" s...   100  0.00020   1
FB|FBgn0028694 - symbol:Rpn11 "Regulatory particle non-AT...   120  0.00020   1
WB|WBGene00004467 - symbol:rpn-11 species:6239 "Caenorhab...   120  0.00021   1
UNIPROTKB|O76577 - symbol:rpn-11 "26S proteasome non-ATPa...   120  0.00021   1
GENEDB_PFALCIPARUM|MAL13P1.343 - symbol:MAL13P1.343 "prot...   119  0.00026   1
UNIPROTKB|Q8ID28 - symbol:MAL13P1.343 "Proteasome regulat...   119  0.00026   1
CGD|CAL0003932 - symbol:orf19.7264 species:5476 "Candida ...   119  0.00027   1
SGD|S000001900 - symbol:RPN11 "Metalloprotease subunit of...   118  0.00033   1
TAIR|locus:2171696 - symbol:AT5G23540 "AT5G23540" species...   116  0.00056   1
UNIPROTKB|F1LMW6 - symbol:Psmd14 "Protein Psmd14" species...   114  0.00085   1
UNIPROTKB|E1C6N0 - symbol:PSMD14 "Uncharacterized protein...   114  0.00089   1
UNIPROTKB|Q17QP9 - symbol:PSMD14 "Proteasome (Prosome, ma...   114  0.00095   1
UNIPROTKB|O00487 - symbol:PSMD14 "26S proteasome non-ATPa...   114  0.00095   1
UNIPROTKB|F1RPQ3 - symbol:PSMD14 "Uncharacterized protein...   114  0.00095   1
MGI|MGI:1913284 - symbol:Psmd14 "proteasome (prosome, mac...   114  0.00095   1
RGD|1594532 - symbol:Psmd14 "proteasome (prosome, macropa...   114  0.00095   1
ZFIN|ZDB-GENE-070410-56 - symbol:psmd14 "proteasome (pros...   114  0.00095   1


>TAIR|locus:2008184 [details] [associations]
            symbol:AMSH1 "AT1G48790" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=ISS] [GO:0006623 "protein targeting to
            vacuole" evidence=RCA] [GO:0016192 "vesicle-mediated transport"
            evidence=RCA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005737 GO:GO:0016020
            GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 EMBL:AC073555
            EMBL:AY072212 EMBL:AY096591 EMBL:AY084581 IPI:IPI00533144
            RefSeq:NP_564533.1 UniGene:At.38354 ProteinModelPortal:Q8VYB5
            SMR:Q8VYB5 MEROPS:M67.A04 PRIDE:Q8VYB5 EnsemblPlants:AT1G48790.1
            GeneID:841301 KEGG:ath:AT1G48790 TAIR:At1g48790 eggNOG:COG1310
            HOGENOM:HOG000195792 InParanoid:Q8VYB5 KO:K11866 OMA:FEVQDKQ
            PhylomeDB:Q8VYB5 ProtClustDB:CLSN2688572 Genevestigator:Q8VYB5
            GO:GO:0071108 GO:GO:0070536 Uniprot:Q8VYB5
        Length = 507

 Score = 1607 (570.8 bits), Expect = 3.8e-165, P = 3.8e-165
 Identities = 322/510 (63%), Positives = 381/510 (74%)

Query:     1 MRSSSEGINIAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSS 60
             M SS E I+IA SA+R+ VDNRI+L++Y+RIADNILKQA+IFR EKN+IDLYVMLLRFSS
Sbjct:     1 MGSSFETIDIATSARRIGVDNRISLKFYFRIADNILKQANIFRAEKNVIDLYVMLLRFSS 60

Query:    61 LVTETIPCHRDYLASFKSQXXXXXXXXXNALSELEELQPAVQQKINELNRKKTNQVTGWS 120
             L  ETIP HRDY  S KS          + L+ELE+L+P VQQ+I+EL  K   +    +
Sbjct:    61 LALETIPSHRDYRTSLKSNKEYLRMRLLDVLTELEKLKPVVQQRIDELYPKLKPRYNVQA 120

Query:   121 HASQNSTLEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLN 180
             H + N +L W S  K +  +YD  K    P     Y GS  QQ     P++E+FR+MS+N
Sbjct:   121 HPA-NGSLGWSSAVKPSFNSYDHAKVRNPPGHNSGYMGSRGQQFLNAAPLEERFRKMSVN 179

Query:   181 FPRPNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIK 240
             F RPN ETLS+HS+LGP GL   WQPPK D  V+YP+NID +P+ IPS +Q  +S   I 
Sbjct:   180 F-RPNEETLSKHSILGPGGLSAQWQPPKYDTKVQYPSNIDFSPVVIPSFQQLVDSKPMI- 237

Query:   241 TDSSNVEPEKSSVQSISTPNDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTE 300
             T+ SN EPEK  V+     N++I+ + TEE  SMISFE  E+ N  ++IRQPSPPPVL E
Sbjct:   238 TNGSNDEPEKPIVEPSVASNEKIQKNYTEELSSMISFEEPESVNENNLIRQPSPPPVLAE 297

Query:   301 VQDLIAAMSPQVTETECQVGNSLSDAFDRSE-PLQLHISTTMMDNFMKLAKSNTDKNLET 359
             VQDL+ A+ P+V E EC + NSL D   RSE PL+LHI+T+MMD FM+LAKSNT KNLET
Sbjct:   298 VQDLVPALCPEVREPECMIENSLPDESLRSESPLELHIATSMMDTFMRLAKSNTKKNLET 357

Query:   360 CGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQS 419
             CGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDK+SLFPLGWIHTHPTQS
Sbjct:   358 CGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKQSLFPLGWIHTHPTQS 417

Query:   420 CFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGFXXX 479
             CFMSSIDVHTHYSYQIMLPE+VAIVMAPQD++R HGIFRLT+PGGM+VIR C +RGF   
Sbjct:   418 CFMSSIDVHTHYSYQIMLPEAVAIVMAPQDSSRNHGIFRLTTPGGMTVIRNCDRRGFHAH 477

Query:   480 XXXXXXXXIYKPCTDVYMNPNLKFDVIDLR 509
                     IY  C +VYMNPNLKFDVIDLR
Sbjct:   478 SSPEDGGPIYNTCKEVYMNPNLKFDVIDLR 507


>TAIR|locus:504955440 [details] [associations]
            symbol:AMSH3 "associated molecule with the SH3 domain
            of STAM 3" species:3702 "Arabidopsis thaliana" [GO:0005634
            "nucleus" evidence=ISM] [GO:0000338 "protein deneddylation"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0006897 "endocytosis" evidence=IMP] [GO:0007033 "vacuole
            organization" evidence=IMP] [GO:0016020 "membrane" evidence=IDA]
            [GO:0016021 "integral to membrane" evidence=IDA] [GO:0016926
            "protein desumoylation" evidence=IDA] [GO:0019941
            "modification-dependent protein catabolic process" evidence=IDA]
            [GO:0044090 "positive regulation of vacuole organization"
            evidence=IMP] [GO:0046907 "intracellular transport" evidence=IMP]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IDA]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IDA]
            [GO:0090316 "positive regulation of intracellular protein
            transport" evidence=IMP] InterPro:IPR000555 Pfam:PF01398
            SMART:SM00232 GO:GO:0016021 GO:GO:0005774 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0015031 GO:GO:0006508
            GO:GO:0006897 GO:GO:0008237 eggNOG:COG1310 HOGENOM:HOG000195792
            KO:K11866 ProtClustDB:CLSN2688572 GO:GO:0071108 GO:GO:0070536
            EMBL:Z97340 EMBL:AL161543 EMBL:BT020354 IPI:IPI00526755
            RefSeq:NP_680708.6 UniGene:At.22204 ProteinModelPortal:Q5PNU3
            SMR:Q5PNU3 MEROPS:M67.A06 PaxDb:Q5PNU3 PRIDE:Q5PNU3
            EnsemblPlants:AT4G16144.1 GeneID:827303 KEGG:ath:AT4G16144
            TAIR:At4g16144 InParanoid:Q5PNU3 OMA:YRIADNL PhylomeDB:Q5PNU3
            Genevestigator:Q5PNU3 GO:GO:0046907 GO:GO:0090316 GO:GO:0044090
            GO:GO:0007033 Uniprot:Q5PNU3
        Length = 507

 Score = 1148 (409.2 bits), Expect = 1.6e-116, P = 1.6e-116
 Identities = 241/511 (47%), Positives = 327/511 (63%)

Query:     8 INIAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIP 67
             I++   A+ ++VDNRI LR YYRIADN+L+QA I+REEKN++DLY+MLLR+SSL++ETIP
Sbjct:     3 IDLNKVAREIEVDNRIPLRNYYRIADNLLRQASIYREEKNVVDLYIMLLRYSSLISETIP 62

Query:    68 CHRDYLASFKSQXXXXXXXXXNALSELEELQPAVQQKINELNRKKTNQVTGWSH---ASQ 124
              HRDY AS   +           ++ELE L+P   Q +++LNR +       S     S 
Sbjct:    63 FHRDYQASLPQERLGSRKRLRAVINELESLKPEFNQLVDKLNRVEDESRQDGSDLPVVSY 122

Query:   125 NS-TLEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLNFPR 183
             +S  +EWP   K + +  D+ K L        Y  ++      T+ +D+QF+++S +F  
Sbjct:   123 SSDAVEWPPAHKASYSRPDINKPLPTSQPSWTYNNNLTSSSNRTQ-IDQQFQKLSFDFLP 181

Query:   184 PNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQ--PSESSIKIKT 241
             PN  TLSRHS LGPNGL      PKS+  V+YP+N D    +   L +  PS SS  +  
Sbjct:   182 PNQATLSRHSFLGPNGLKRQMVAPKSEIKVQYPSNTDWGSADNSGLIEAGPSSSSASLNG 241

Query:   242 DSSNVEPEKSSVQSISTPNDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEV 301
             DS  V    S++ S+ + +D      +E   S    + +E P     ++QPSPPPVL +V
Sbjct:   242 DSQEV----STLNSVLSLDDGRWQRHSEAVNSQFISDATEDPFQFVGMKQPSPPPVLAQV 297

Query:   302 QDLIAAMSPQVTETECQVGNSLS--DAFDRSEPLQ-LHISTTMMDNFMKLAKSNTDKNLE 358
                +A + P     + + G ++   +  + S   Q LH+   +MD+F++LA+SNT++NLE
Sbjct:   298 HQELAQICPSKV-ADPRPGPAIPSLEGKEGSNSYQHLHVPVRIMDDFLRLARSNTERNLE 356

Query:   359 TCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQ 418
             TCG+LAGSLKNR F+IT LIIPKQESTSDSCQ  NEEEIFEVQD+ SLFPLGWIHTHPTQ
Sbjct:   357 TCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIHTHPTQ 416

Query:   419 SCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGFXX 478
             +CFMSS+D+HTHYSYQIMLPE+VAIVMAP D +  HGIF L+ P G+SVIR CQQRGF  
Sbjct:   417 TCFMSSVDLHTHYSYQIMLPEAVAIVMAPTDESTPHGIFHLSDPSGVSVIRNCQQRGFHP 476

Query:   479 XXXXXXXXXIYKPCTDVYMNPNLKFDVIDLR 509
                      IY+ C+ V++N  LK++V+DLR
Sbjct:   477 HEESEDGNPIYEHCSHVFLNAKLKYEVLDLR 507


>TAIR|locus:2019903 [details] [associations]
            symbol:AMSH2 "AT1G10600" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005739 "mitochondrion" evidence=ISM]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=ISS] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0006508
            GO:GO:0008237 EMBL:AC009398 eggNOG:COG1310 KO:K11866 GO:GO:0071108
            GO:GO:0070536 EMBL:AC007067 EMBL:AK317451 EMBL:BT012645
            EMBL:AK175458 IPI:IPI00539357 IPI:IPI00657408 IPI:IPI00846823
            PIR:E86239 RefSeq:NP_001031020.1 RefSeq:NP_001077505.1
            RefSeq:NP_172530.2 UniGene:At.50647 ProteinModelPortal:Q6NKP9
            SMR:Q6NKP9 MEROPS:M67.A05 EnsemblPlants:AT1G10600.1 GeneID:837603
            KEGG:ath:AT1G10600 KEGG:dosa:Os01t0661500-01 TAIR:At1g10600
            HOGENOM:HOG000015127 InParanoid:Q6NKP9 OMA:ESTSNSC PhylomeDB:Q6NKP9
            ProtClustDB:CLSN2681498 Genevestigator:Q6NKP9 Uniprot:Q6NKP9
        Length = 223

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 104/219 (47%), Positives = 153/219 (69%)

Query:   293 SPPPVLTEVQDLIAAMSPQVTETECQVGNSLSDAFDRSEPL--QLHISTTMMDNFMKLAK 350
             SP P L+ V++ +   S  V+       ++++        +   +HIS  ++++F +LA+
Sbjct:     6 SPSPSLSCVEN-VTCKSSHVSRVLISGTDNINHGESSEAKILRDVHISERLLEDFTELAR 64

Query:   351 SNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLG 410
              NT+K+LETCG LA  L+   FY+T LIIPKQESTS+SCQA NE E+F +Q++R L+P+G
Sbjct:    65 ENTEKDLETCGTLAAFLERGIFYVTTLIIPKQESTSNSCQAMNEVEVFSIQNERELYPVG 124

Query:   411 WIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQ 470
             WIHTHP+Q CFMSS+D+HTHYSYQ+M+PE+ AIV+AP D+++ +GIF+LT PGGM V+R 
Sbjct:   125 WIHTHPSQGCFMSSVDLHTHYSYQVMVPEAFAIVVAPTDSSKSYGIFKLTDPGGMEVLRG 184

Query:   471 CQQRGFXXXXXXXXXXXIYKPCTDVYMNPNLKFDVIDLR 509
             C + GF           +Y+ C++VY N NL+F++ DLR
Sbjct:   185 CSETGFHPHKEPEDGNPVYEHCSNVYKNSNLRFEIFDLR 223


>POMBASE|SPAC19B12.10 [details] [associations]
            symbol:sst2 "human AMSH/STAMBP protein homolog,
            ubiquitin specific-protease" species:4896 "Schizosaccharomyces
            pombe" [GO:0004221 "ubiquitin thiolesterase activity" evidence=ISS]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
            [GO:0005768 "endosome" evidence=IDA] [GO:0006897 "endocytosis"
            evidence=IMP] [GO:0008237 "metallopeptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0030133
            "transport vesicle" evidence=IDA] [GO:0032153 "cell division site"
            evidence=IDA] [GO:0043328 "protein targeting to vacuole involved in
            ubiquitin-dependent protein catabolic process via the
            multivesicular body sorting pathway" evidence=IMP] [GO:0045324
            "late endosome to vacuole transport" evidence=IMP] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0071276 "cellular response to
            cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
            ion" evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
            PomBase:SPAC19B12.10 EMBL:CU329670 GenomeReviews:CU329670_GR
            GO:GO:0032153 GO:GO:0046872 GO:GO:0005768 GO:GO:0071276
            GO:GO:0071585 GO:GO:0006897 GO:GO:0008237 GO:GO:0030133
            eggNOG:COG1310 HOGENOM:HOG000195792 KO:K11866 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0043328 OrthoDB:EOG4XPTQZ
            RefSeq:NP_594773.1 ProteinModelPortal:Q9P371 STRING:Q9P371
            MEROPS:M67.A14 EnsemblFungi:SPAC19B12.10.1 GeneID:2542606
            KEGG:spo:SPAC19B12.10 OMA:NAFFITH NextBio:20803655 Uniprot:Q9P371
        Length = 435

 Score = 463 (168.0 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
 Identities = 115/311 (36%), Positives = 162/311 (52%)

Query:   207 PKSDKLVKYPNNIDLTPIEIPSLR-QPSESSIKIKTDSSNVEPEKSSVQSISTPN-DEIE 264
             P  +K V Y +   L    +  L+  P  S+  +  DS  +    S +     P+ +   
Sbjct:   132 PSLEKPVSYVDEPILEQWALSDLQILPPSSTDLLSPDSQKLSKSSSDLPQFDYPSLNSSP 191

Query:   265 IHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEVQDLIAAMSPQVTETE----CQVG 320
                +  P S   FE +   +S  V    SP P L + +D+     P  T T        G
Sbjct:   192 TFNSNLPISSSRFEKTSLSDSKLV----SPEP-LDDNKDIQFIKKPIYTRTSEPRPKPAG 246

Query:   321 NSLSDAF-DRSEPLQ-LHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALI 378
                  A+ +  +PL+ +++   +   F+ + K NT KNLETCGIL G L+   F+IT L+
Sbjct:   247 TFKIHAYTEGGKPLRTIYLPKLLKKVFLDVVKPNTKKNLETCGILCGKLRQNAFFITHLV 306

Query:   379 IPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLP 438
             IP QE+TSD+C  T+E  +FE QDK +L  LGWIHTHPTQ+CFMSS+D+HTH SYQ+MLP
Sbjct:   307 IPLQEATSDTCGTTDEASLFEFQDKHNLLTLGWIHTHPTQTCFMSSVDLHTHCSYQLMLP 366

Query:   439 ESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGFXXXXXXXXXXXIYKPCTDVYMN 498
             E++AIVMAP   T   GIFRL  P G+  I +C++ G            + +P       
Sbjct:   367 EAIAIVMAPSKNTS--GIFRLLDPEGLQTIVKCRKPGLFHPHEGKVYTMVAQP--GHVRE 422

Query:   499 PNLKFDVIDLR 509
              N K  V+DLR
Sbjct:   423 INSKLQVVDLR 433

 Score = 100 (40.3 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
 Identities = 33/126 (26%), Positives = 59/126 (46%)

Query:    10 IAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCH 69
             IA+ A   D +  I L+ + R +  I KQA ++  E +  +   +L R+  L  +    H
Sbjct:    16 IASRAGAFDFNKNIPLKNWLRTSTTISKQAHVYVSEHDYSNGVFLLFRYCELFMKCQK-H 74

Query:    70 RDYLASFKSQXXXXXXXXXNALSELEELQPAVQQKINELNRKKTNQVTGWSHASQNSTLE 129
              D  A++K +         NAL E+E ++P V+++  +   +K N +      S   +  
Sbjct:    75 PD-AAAYKKELFDYYQGVRNALEEIELIKPIVKEQYEQYQCQK-NDLDDLKKLSMKDSQ- 131

Query:   130 WPSLKK 135
              PSL+K
Sbjct:   132 -PSLEK 136


>DICTYBASE|DDB_G0284037 [details] [associations]
            symbol:DDB_G0284037 "MPN/PAD-1 domain-containing
            protein" species:44689 "Dictyostelium discoideum" [GO:0008150
            "biological_process" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0008237 "metallopeptidase
            activity" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
            dictyBase:DDB_G0284037 GenomeReviews:CM000153_GR GO:GO:0046872
            GO:GO:0006508 GO:GO:0008237 EMBL:AAFI02000063 eggNOG:COG1310
            KO:K11866 EMBL:AF018638 RefSeq:XP_638757.1
            ProteinModelPortal:Q54Q40 MEROPS:M67.A15 EnsemblProtists:DDB0191462
            GeneID:8624428 KEGG:ddi:DDB_G0284037 InParanoid:Q54Q40
            Uniprot:Q54Q40
        Length = 715

 Score = 415 (151.1 bits), Expect = 1.3e-51, Sum P(3) = 1.3e-51
 Identities = 78/172 (45%), Positives = 114/172 (66%)

Query:   306 AAMSPQVTETECQVGNSLSDAFDRSEPLQ-LHISTTMMDNFMKLAKSNTDKNLETCGILA 364
             A  +P +T T  +     S+A  +   L+ + +   +   FM+LA++NT +++ETCGIL+
Sbjct:   507 AVNTPSITPTTNKPNIDSSEASKKYSKLRKIIVHGEVFQEFMRLAENNTKRSIETCGILS 566

Query:   365 GSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSS 424
             G+L N  F IT +IIPKQE T+D+C    E EIFE Q +  L  LGWIHTHPTQ CF+S+
Sbjct:   567 GTLSNDVFRITTIIIPKQEGTTDTCNTIEEHEIFEYQLENDLLTLGWIHTHPTQDCFLSA 626

Query:   425 IDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGF 476
             +DVHTH SYQ +L E++A+V++P  A    GIFRLT P G+  +++C+ + F
Sbjct:   627 VDVHTHCSYQYLLQEAIAVVISPM-ANPNFGIFRLTDPPGLETVQKCKLKSF 677

 Score = 120 (47.3 bits), Expect = 1.3e-51, Sum P(3) = 1.3e-51
 Identities = 31/114 (27%), Positives = 55/114 (48%)

Query:     3 SSSEGINIAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLV 62
             SS E + +    + ++VD   ++ +Y    +N++KQADI++ E +I   Y+  LRF  L+
Sbjct:    11 SSVEEL-VKKHVEGVEVDKNYSIFHYLSTCNNLVKQADIYKSEGDIERTYIYSLRFCILI 69

Query:    63 TETIPCHRDY-LASFKSQXXXXXXXXXNALSELEELQPAVQQKINELNRKKTNQ 115
              E +  H D+   SF              L ELE L+  +++    +  KK  +
Sbjct:    70 FEKLQKHPDFNKESFTKSRNEIKRKAELKLKELEGLKETLKKGYERIQHKKEEE 123

 Score = 48 (22.0 bits), Expect = 1.3e-51, Sum P(3) = 1.3e-51
 Identities = 48/219 (21%), Positives = 84/219 (38%)

Query:    91 LSELEELQPAVQQKIN-ELNRKKTNQVTGWSHASQNSTLEWPSLKKQTLTNYDVTKALRL 149
             +  L+E++    +K+  + N K+      +    Q + LE    +++ L   +  K   L
Sbjct:   169 IQRLKEVEDFENRKLQAQKNIKRATSARTFELLRQEALLE----ERKRLQGIETEKKRIL 224

Query:   150 PSRELAYQGSIPQQLAYTRPVD----------EQFRRMSLNFPRPNAETLSRHSLLG--- 196
               ++ A +    QQL   +  +          EQ R  SL  P P+  +     LL    
Sbjct:   225 AEKQEALEKEFQQQLFEQQEKERLEKERLEKEEQLRLASLPPPPPDYSSFDSDQLLNLIE 284

Query:   197 PNGLYGHWQPPKSDKLV-KYPNNIDLTPIEIPSLRQPSESSIKIKTDSSNVEPEKSSVQ- 254
              N           DKL  ++  +    P   P + QPS S  K K +++N   + ++ Q 
Sbjct:   285 NNNKKLENNNQTDDKLDNEFLLDPSFLPPPPPIITQPSPSQEK-KDNNNNNNNKNTTAQL 343

Query:   255 --SISTP----NDEIEIHRTEEPCSMISFETSEAPNSAD 287
               SI+ P    N+E ++       S I F      NS +
Sbjct:   344 PLSITQPPHMPNNEKKLPPIYNSTSPIQFGYPSLNNSVN 382

 Score = 46 (21.3 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
 Identities = 21/102 (20%), Positives = 40/102 (39%)

Query:    95 EELQPAVQQKINELNRKKTNQVTGWSHASQNSTLEW--PSLKKQTLTNYDVTKALRLPSR 152
             ++ QP +Q   N +NR    Q   ++    +S L    P  + Q    Y   +  +   +
Sbjct:   403 QQQQP-IQSPTNNINRPNIPQYNNYNAKPLSSNLNPLPPQYQPQQQQQYQQQQQQQQYQQ 461

Query:   153 ELAYQGSIPQQLAYTRPVDEQFRRMSLNFPRPNAETLSRHSL 194
             +  YQ    QQ    +    Q  ++    P  N +++S + L
Sbjct:   462 QQQYQQQQQQQQQQQQQQQHQLPKLPQYQPIEN-KSISANGL 502

 Score = 39 (18.8 bits), Expect = 1.1e-50, Sum P(3) = 1.1e-50
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query:   292 PSPPPVLTE 300
             P PPP++T+
Sbjct:   312 PPPPPIITQ 320


>UNIPROTKB|Q96FJ0 [details] [associations]
            symbol:STAMBPL1 "AMSH-like protease" species:9606 "Homo
            sapiens" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
            "metallopeptidase activity" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0046872
            EMBL:CH471066 GO:GO:0006508 GO:GO:0008237 EMBL:AL157394
            eggNOG:COG1310 HOGENOM:HOG000195792 HOVERGEN:HBG058519
            EMBL:AB010120 EMBL:AB037794 EMBL:AK056086 EMBL:BC010846
            IPI:IPI00002208 IPI:IPI00290975 RefSeq:NP_065850.1 UniGene:Hs.16229
            UniGene:Hs.701879 PDB:2ZNR PDB:2ZNV PDBsum:2ZNR PDBsum:2ZNV
            ProteinModelPortal:Q96FJ0 SMR:Q96FJ0 IntAct:Q96FJ0
            MINT:MINT-1444179 STRING:Q96FJ0 MEROPS:M67.003 PhosphoSite:Q96FJ0
            DMDM:71153542 PaxDb:Q96FJ0 PRIDE:Q96FJ0 Ensembl:ENST00000371924
            Ensembl:ENST00000371926 Ensembl:ENST00000371927 GeneID:57559
            KEGG:hsa:57559 UCSC:uc001kfk.3 UCSC:uc010qmx.1 CTD:57559
            GeneCards:GC10P090630 H-InvDB:HIX0009014 HGNC:HGNC:24105
            HPA:HPA040202 MIM:612352 neXtProt:NX_Q96FJ0 PharmGKB:PA142670864
            KO:K11867 OMA:CKHVLVK OrthoDB:EOG415GDF ChiTaRS:STAMBPL1
            EvolutionaryTrace:Q96FJ0 GenomeRNAi:57559 NextBio:64054
            ArrayExpress:Q96FJ0 Bgee:Q96FJ0 CleanEx:HS_STAMBPL1
            Genevestigator:Q96FJ0 GermOnline:ENSG00000138134 Uniprot:Q96FJ0
        Length = 436

 Score = 386 (140.9 bits), Expect = 4.6e-46, Sum P(3) = 4.6e-46
 Identities = 78/165 (47%), Positives = 109/165 (66%)

Query:   345 FMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKR 404
             F++LA+SNT + +ETCGIL G L + +F IT +I+PKQ +  D C   N EE+F VQD+ 
Sbjct:   279 FLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQH 338

Query:   405 SLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGG 464
              L  LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPE++AIV +P+   +  GIFRLT+  G
Sbjct:   339 DLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKH--KDTGIFRLTN-AG 395

Query:   465 MSVIRQCQQRGFXXXXXXXXXXXIYKPCTDVYMNPNLKFDVIDLR 509
             M  +  C+++GF           I   C  V +  ++K  V+DLR
Sbjct:   396 MLEVSACKKKGFHPHTKEPRLFSI---CKHVLVK-DIKIIVLDLR 436

 Score = 88 (36.0 bits), Expect = 4.6e-46, Sum P(3) = 4.6e-46
 Identities = 17/56 (30%), Positives = 31/56 (55%)

Query:    17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDY 72
             + +   I  R Y+R    + + A ++ EE N+ + +V+  +F +L  E +P HRDY
Sbjct:    40 ITISEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDY 95

 Score = 37 (18.1 bits), Expect = 4.6e-46, Sum P(3) = 4.6e-46
 Identities = 13/44 (29%), Positives = 19/44 (43%)

Query:    95 EELQPAVQQKINELNRKKTNQVTGWSHASQNSTLEWPSLKKQTL 138
             E L+    Q++ E  RK+  Q+      S+        LKKQ L
Sbjct:   146 EILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFFEDQLKKQEL 189


>UNIPROTKB|G4N2G6 [details] [associations]
            symbol:MGG_13915 "STAM-binding protein" species:242507
            "Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 EMBL:CM001233
            KO:K11866 RefSeq:XP_003713178.1 ProteinModelPortal:G4N2G6
            EnsemblFungi:MGG_13915T0 GeneID:5049411 KEGG:mgr:MGG_13915
            Uniprot:G4N2G6
        Length = 563

 Score = 390 (142.3 bits), Expect = 6.2e-46, Sum P(2) = 6.2e-46
 Identities = 100/298 (33%), Positives = 150/298 (50%)

Query:   223 PIEIPSLRQ---PSESSIK-IKTDSSNVEPEKSSVQSISTPNDEIEIHRTEEPCSMISFE 278
             PI+ P+ +    PS S  + +  +S    P  S       P+ +  +     P    + E
Sbjct:   269 PIQNPASQHYNYPSVSRPRPLNYNSYEASPAPSRPPKEQYPSYQDRLEPLPPPIPRKAPE 328

Query:   279 TSEAPNSADVIRQPSPPPVLTEVQDLIAAMSPQVTETECQVGNSLSDA--FDRSEPLQ-L 335
                AP +        P      VQ+  +++   V E   +   +   A   +  +PL+ +
Sbjct:   329 AGRAPPTLPPKTLDQPEE--RNVQNSTSSVDRAVNELSKRKNITFLPAGYTEAGKPLRPI 386

Query:   336 HISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEE 395
              +  ++ D F+++A  NT K LE CGI+ G   N   ++ AL+IP Q  TSD+C+  +E 
Sbjct:   387 FVPRSLKDKFLEIAGPNTRKGLELCGIICGRPINNALFVAALLIPNQICTSDTCETEDEF 446

Query:   396 EIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHG 455
             +IFE  +K ++  +GWIHTHPTQ+CFMSS D+HTH SYQ + PESVAIV AP+      G
Sbjct:   447 QIFEFCEKENMIIIGWIHTHPTQTCFMSSRDLHTHASYQAISPESVAIVCAPK--YNDFG 504

Query:   456 IFRLTSPGGMSVIRQCQQRGFXXXXXXXXXXXIYK----PCTDVYMNPNLKFDVIDLR 509
             +FRLT P G+  + +C                IYK    P + VYM+  + FDV DLR
Sbjct:   505 VFRLTDPPGLPHVLRCPHTN-TFHQHELPESEIYKDALHPVSHVYMSDQIDFDVTDLR 561

 Score = 109 (43.4 bits), Expect = 6.2e-46, Sum P(2) = 6.2e-46
 Identities = 45/183 (24%), Positives = 80/183 (43%)

Query:    10 IAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCH 69
             I   A + + +  I L+++   A+ + ++ + ++EE N    Y++LLR  SLV +  P H
Sbjct:    19 IVEQADQFEFNINIHLKHWVGAAETLYREGEFYKEEGNFAKAYLLLLRHCSLVLKKFPEH 78

Query:    70 -RDYLASFKSQXXXXXXXXXNALSELEELQPAVQQKINELNRK-KTNQVTGW-------- 119
                +    +             +SELE+L+  + +  NE  R  +T Q+           
Sbjct:    79 PMAHTRDGRKLIKPLQERLTRIISELEDLKRHINEAYNEWERLVRTGQIDDRPVPDSRYD 138

Query:   120 SHASQNSTLEWPSLKKQTLTNYDVTK--ALRLPS----RELAYQGSIPQQLAYTRPVDEQ 173
              +A+Q+  L W +  +  L +    +  A+RL      R  A + SI Q  A     +EQ
Sbjct:   139 KYAAQDPALSWNNATQAQLLDAGNNQELAVRLAKDDYIRRDAARRSIRQ--AGVSEYEEQ 196

Query:   174 FRR 176
              RR
Sbjct:   197 IRR 199


>UNIPROTKB|F1SLF9 [details] [associations]
            symbol:STAMBP "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0032154 "cleavage furrow" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0000281
            "cytokinesis after mitosis" evidence=IEA] InterPro:IPR000555
            Pfam:PF01398 SMART:SM00232 GO:GO:0005886 GO:GO:0005634
            GO:GO:0005737 KO:K11866 CTD:10617 OMA:DVPPRRY
            GeneTree:ENSGT00390000015439 EMBL:CU463123 RefSeq:XP_003125056.1
            UniGene:Ssc.44382 Ensembl:ENSSSCT00000009091 GeneID:100516729
            KEGG:ssc:100516729 Uniprot:F1SLF9
        Length = 424

 Score = 393 (143.4 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
 Identities = 86/201 (42%), Positives = 124/201 (61%)

Query:   281 EAPNSADVIRQPSPPPVLTEVQDL---IAAMSPQVTETECQVGN-SLSDAFDRSEPLQ-L 335
             E P S DV   P+ P + T+  D    +    P V +   + G  S S +    + L+ +
Sbjct:   201 EKP-SLDV--SPTAPVISTQPSDCNTTVRPAKPPVVDRSLKPGALSNSGSTPTIDGLRHV 257

Query:   336 HISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEE 395
              +   +   F++LA +NT + +ETCGIL G L   +F IT ++IPKQ + SD C   NEE
Sbjct:   258 VVPEKLCPQFLQLASANTARGVETCGILCGKLMRNEFTITHVLIPKQSAGSDYCNTENEE 317

Query:   396 EIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHG 455
             E+F +QD++ L  LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+   ++ G
Sbjct:   318 ELFLIQDQQGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FQETG 375

Query:   456 IFRLTSPGGMSVIRQCQQRGF 476
              FRLT  G +  I  C+Q+GF
Sbjct:   376 FFRLTDHG-LEEISSCRQKGF 395

 Score = 96 (38.9 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
 Identities = 19/56 (33%), Positives = 33/56 (58%)

Query:    17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDY 72
             ++V+  I  R Y+R    I++ A I+ EE NI   +++  ++ +L  E +P HRDY
Sbjct:    25 VEVNEDIPPRRYFRSGMEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRDY 80


>UNIPROTKB|Q17QR2 [details] [associations]
            symbol:STAMBP "STAM binding protein" species:9913 "Bos
            taurus" [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0032154 "cleavage furrow" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0000281
            "cytokinesis after mitosis" evidence=IEA] InterPro:IPR000555
            Pfam:PF01398 SMART:SM00232 GO:GO:0005886 GO:GO:0005634
            GO:GO:0005737 eggNOG:COG1310 HOGENOM:HOG000195792 KO:K11866
            MEROPS:M67.006 CTD:10617 HOVERGEN:HBG058519 OMA:DVPPRRY
            OrthoDB:EOG4B5P58 GeneTree:ENSGT00390000015439 EMBL:DAAA02030344
            EMBL:BC118225 IPI:IPI00685177 RefSeq:NP_001069439.1 UniGene:Bt.9164
            Ensembl:ENSBTAT00000012633 GeneID:532672 KEGG:bta:532672
            InParanoid:Q17QR2 NextBio:20875765 Uniprot:Q17QR2
        Length = 423

 Score = 395 (144.1 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
 Identities = 88/201 (43%), Positives = 125/201 (62%)

Query:   281 EAPNSADVIRQPSPPPVLTEVQDLIAAM---SPQVTETECQVG--NSLSDAFDRSEPLQL 335
             E P S DV   P+ P + T+  D  AA+    P V +   + G  N+L +A        +
Sbjct:   201 ETP-SLDVF--PTVPAIPTQPSDCNAAVRLAKPPVVDRSLKPGALNNL-EAPTIDGLRHV 256

Query:   336 HISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEE 395
              +   +   F++LA +NT + +ETCGIL G L   +F IT ++IPKQ + SD C   NEE
Sbjct:   257 VVPGKLCPQFLQLAGANTTRGVETCGILCGKLMRNEFTITHVLIPKQSAGSDYCNTENEE 316

Query:   396 EIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHG 455
             E+F +QD++ L  LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+   ++ G
Sbjct:   317 ELFLIQDQQGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FQETG 374

Query:   456 IFRLTSPGGMSVIRQCQQRGF 476
              FRLT  G +  I  C+Q+GF
Sbjct:   375 FFRLTDHG-LEEISSCRQKGF 394

 Score = 90 (36.7 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
 Identities = 17/56 (30%), Positives = 33/56 (58%)

Query:    17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDY 72
             ++++  I  R Y+R    I++ A ++ EE NI   +++  ++ +L  E +P HRDY
Sbjct:    25 VEINEDIPPRRYFRSGVEIIRMASVYCEEGNIEYAFILYNKYITLFIEKLPKHRDY 80


>UNIPROTKB|O95630 [details] [associations]
            symbol:STAMBP "STAM-binding protein" species:9606 "Homo
            sapiens" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
            "metallopeptidase activity" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0005769 "early endosome"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=TAS] [GO:0007259 "JAK-STAT cascade"
            evidence=TAS] [GO:0000281 "cytokinesis after mitosis" evidence=IMP]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
            [GO:0016579 "protein deubiquitination" evidence=IMP] [GO:0032154
            "cleavage furrow" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR000555
            Pfam:PF01398 SMART:SM00232 GO:GO:0005886 GO:GO:0005634
            GO:GO:0005737 EMBL:CH471053 GO:GO:0046872 GO:GO:0008284
            GO:GO:0006508 GO:GO:0008237 GO:GO:0000281 EMBL:AC073046
            GO:GO:0005769 eggNOG:COG1310 HOGENOM:HOG000195792 KO:K11866
            GO:GO:0032154 GO:GO:0004843 GO:GO:0016579 GO:GO:0007259 PDB:2XZE
            PDBsum:2XZE EMBL:U73522 EMBL:BC007682 EMBL:BC065574 EMBL:BC101467
            EMBL:BC101469 IPI:IPI00007943 RefSeq:NP_006454.1 RefSeq:NP_964010.1
            RefSeq:NP_998787.1 UniGene:Hs.469018 PDB:3RZU PDB:3RZV PDBsum:3RZU
            PDBsum:3RZV ProteinModelPortal:O95630 SMR:O95630 DIP:DIP-33062N
            IntAct:O95630 MINT:MINT-96921 STRING:O95630 MEROPS:M67.006
            PhosphoSite:O95630 REPRODUCTION-2DPAGE:IPI00007943 PaxDb:O95630
            PeptideAtlas:O95630 PRIDE:O95630 DNASU:10617
            Ensembl:ENST00000339566 Ensembl:ENST00000394070
            Ensembl:ENST00000394073 Ensembl:ENST00000409707 GeneID:10617
            KEGG:hsa:10617 UCSC:uc002sjs.3 CTD:10617 GeneCards:GC02P074056
            HGNC:HGNC:16950 HPA:HPA035800 MIM:606247 neXtProt:NX_O95630
            PharmGKB:PA134955569 HOVERGEN:HBG058519 InParanoid:O95630
            OMA:DVPPRRY OrthoDB:EOG4B5P58 PhylomeDB:O95630 GenomeRNAi:10617
            NextBio:40340 ArrayExpress:O95630 Bgee:O95630 CleanEx:HS_STAMBP
            Genevestigator:O95630 Uniprot:O95630
        Length = 424

 Score = 381 (139.2 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
 Identities = 78/170 (45%), Positives = 112/170 (65%)

Query:   310 PQVTETECQVGN-SLSDAFDRSEPLQLHISTT--MMDNFMKLAKSNTDKNLETCGILAGS 366
             P V +   + G  S S++    + L+ H+     +   F++LA +NT + +ETCGIL G 
Sbjct:   230 PPVVDRSLKPGALSNSESIPTIDGLR-HVVVPGRLCPQFLQLASANTARGVETCGILCGK 288

Query:   367 LKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSID 426
             L   +F IT ++IPKQ + SD C   NEEE+F +QD++ L  LGWIHTHPTQ+ F+SS+D
Sbjct:   289 LMRNEFTITHVLIPKQSAGSDYCNTENEEELFLIQDQQGLITLGWIHTHPTQTAFLSSVD 348

Query:   427 VHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGF 476
             +HTH SYQ+MLPESVAIV +P+   ++ G F+LT  G +  I  C+Q+GF
Sbjct:   349 LHTHCSYQMMLPESVAIVCSPK--FQETGFFKLTDHG-LEEISSCRQKGF 395

 Score = 100 (40.3 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
 Identities = 27/114 (23%), Positives = 57/114 (50%)

Query:    17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASF 76
             ++V+  I  R Y+R    I++ A I+ EE NI   +++  ++ +L  E +P HRDY ++ 
Sbjct:    25 VEVNEDIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRDYKSAV 84

Query:    77 KSQXXXXXXXXXNALSELEELQ-PAVQQKINELNRKKTNQVTGWSHASQNSTLE 129
               +         + + +L+E+  P  ++   EL ++ T + T ++   +    E
Sbjct:    85 IPEKK-------DTVKKLKEIAFPKAEELKAELLKRYTKEYTEYNEEKKKEAEE 131


>MGI|MGI:1917777 [details] [associations]
            symbol:Stambp "STAM binding protein" species:10090 "Mus
            musculus" [GO:0000281 "cytokinesis after mitosis" evidence=ISO]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=ISO]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0007165 "signal transduction"
            evidence=TAS] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=ISO;IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0032154 "cleavage furrow" evidence=ISO;IDA] [GO:0043066
            "negative regulation of apoptotic process" evidence=IMP]
            [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000555
            Pfam:PF01398 SMART:SM00232 MGI:MGI:1917777 GO:GO:0005886
            GO:GO:0005634 GO:GO:0007165 GO:GO:0043066 GO:GO:0046872
            GO:GO:0005768 GO:GO:0006508 GO:GO:0008237 eggNOG:COG1310
            HOGENOM:HOG000195792 KO:K11866 GO:GO:0032154 GO:GO:0016579
            MEROPS:M67.006 CTD:10617 HOVERGEN:HBG058519 OMA:DVPPRRY
            OrthoDB:EOG4B5P58 EMBL:AB010123 EMBL:AK017600 EMBL:AK019907
            EMBL:AK136961 EMBL:AK139391 EMBL:BC003497 EMBL:BC006939
            EMBL:BC025111 IPI:IPI00131905 RefSeq:NP_077201.1 UniGene:Mm.32801
            ProteinModelPortal:Q9CQ26 SMR:Q9CQ26 STRING:Q9CQ26
            PhosphoSite:Q9CQ26 PaxDb:Q9CQ26 PRIDE:Q9CQ26
            Ensembl:ENSMUST00000068054 GeneID:70527 KEGG:mmu:70527
            UCSC:uc009cns.1 GeneTree:ENSGT00390000015439 InParanoid:Q9CQ26
            NextBio:331795 Bgee:Q9CQ26 CleanEx:MM_STAMBP Genevestigator:Q9CQ26
            GermOnline:ENSMUSG00000006906 Uniprot:Q9CQ26
        Length = 424

 Score = 382 (139.5 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 102/302 (33%), Positives = 152/302 (50%)

Query:   184 PNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTP-IEIPSLRQPSESSIKIKTD 242
             P AE L    L      Y  ++  K  +  +   NI +   +E    R   +   +++ +
Sbjct:   101 PKAEELKTELLRRYTKEYEQYKERKKKEEEELARNIAIQQELEKEKQRVAQQKQKQLEQE 160

Query:   243 SSNVEPEKSSVQSISTPNDEI--EIHRTEE-PCSMISFETSEAPNSADVIRQPSPPPVLT 299
               +   E    Q +     +I  E  + +  PC  +     E P   DV   PS P   T
Sbjct:   161 QFHAFEEMIQRQELEKERLKIVQEFGKVDPGPCGPL-LPDLEKP-CVDVA--PSSPFSPT 216

Query:   300 EVQDLIAAM---SPQVTETECQVGN-SLSDAFDRSEPLQ-LHISTTMMDNFMKLAKSNTD 354
             +  D    M    P V +   + G  S+ +     E L+ + +   +   F++LA +NT 
Sbjct:   217 QTPDCNTGMRPAKPPVVDRSLKPGALSVIENVPTIEGLRHIVVPRNLCSEFLQLASANTA 276

Query:   355 KNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHT 414
             K +ETCG+L G L   +F IT ++IP+Q    D C   NEEEIF +QD   L  LGWIHT
Sbjct:   277 KGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEEIFFMQDDLGLLTLGWIHT 336

Query:   415 HPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQR 474
             HPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+   ++ G F+LT  G +  I  C+Q+
Sbjct:   337 HPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FQETGFFKLTDYG-LQEISTCRQK 393

Query:   475 GF 476
             GF
Sbjct:   394 GF 395

 Score = 98 (39.6 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 29/104 (27%), Positives = 53/104 (50%)

Query:    13 SAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDY 72
             SA  L+ D  I  R YYR    I++ A ++ EE NI   +++  ++ +L  E +P HRDY
Sbjct:    23 SAVELNED--IPPRRYYRSGVEIIRMASVYSEEGNIEHAFILYNKYITLFIEKLPKHRDY 80

Query:    73 LASFKSQXXXXXXXXXNALSELEELQ-PAVQQKINELNRKKTNQ 115
              ++   +         +A+ +L+ +  P  ++   EL R+ T +
Sbjct:    81 KSAIIPEKK-------DAVKKLKSVAFPKAEELKTELLRRYTKE 117


>MGI|MGI:1923880 [details] [associations]
            symbol:Stambpl1 "STAM binding protein like 1" species:10090
            "Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
            MGI:MGI:1923880 GO:GO:0046872 GO:GO:0006508 GO:GO:0008237
            eggNOG:COG1310 HOGENOM:HOG000195792 HOVERGEN:HBG058519
            GeneTree:ENSGT00390000015439 MEROPS:M67.003 CTD:57559 KO:K11867
            OMA:CKHVLVK OrthoDB:EOG415GDF EMBL:AB066211 EMBL:AB066212
            EMBL:AB066213 EMBL:AB010121 EMBL:AB010122 EMBL:BC018343
            IPI:IPI00312188 IPI:IPI00608113 RefSeq:NP_083958.3
            UniGene:Mm.130952 ProteinModelPortal:Q76N33 SMR:Q76N33
            STRING:Q76N33 PhosphoSite:Q76N33 PaxDb:Q76N33 PRIDE:Q76N33
            DNASU:76630 Ensembl:ENSMUST00000054956 Ensembl:ENSMUST00000119603
            GeneID:76630 KEGG:mmu:76630 UCSC:uc008hgc.1 UCSC:uc008hge.1
            InParanoid:Q76N33 NextBio:345496 Bgee:Q76N33 CleanEx:MM_STAMBPL1
            Genevestigator:Q76N33 GermOnline:ENSMUSG00000024776 Uniprot:Q76N33
        Length = 436

 Score = 387 (141.3 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
 Identities = 78/173 (45%), Positives = 111/173 (64%)

Query:   337 ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEE 396
             +S  +   F+ LA SNT + +ETCGIL G L + +F IT +++PKQ +  D C   N EE
Sbjct:   271 LSRDLCHKFLLLADSNTVRGIETCGILCGKLTHNEFTITHVVVPKQSAGPDYCDVENVEE 330

Query:   397 IFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGI 456
             +F VQD+  L  LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPE++AIV +P+   +  GI
Sbjct:   331 LFNVQDQHGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKH--KDTGI 388

Query:   457 FRLTSPGGMSVIRQCQQRGFXXXXXXXXXXXIYKPCTDVYMNPNLKFDVIDLR 509
             FRLT+  GM  +  C+++GF           I   C+ V +  ++K  V+DLR
Sbjct:   389 FRLTN-AGMLEVSTCKKKGFHPHTKDPKLFSI---CSHVLVK-DIKTTVLDLR 436

 Score = 92 (37.4 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
 Identities = 17/56 (30%), Positives = 32/56 (57%)

Query:    17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDY 72
             + ++  I  R Y+R    + + A ++ EE N+ + +V+  +F +L  E +P HRDY
Sbjct:    40 ISINEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPSHRDY 95


>UNIPROTKB|E1BRS3 [details] [associations]
            symbol:Gga.34764 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000281 "cytokinesis after mitosis"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IEA]
            [GO:0032154 "cleavage furrow" evidence=IEA] [GO:0043066 "negative
            regulation of apoptotic process" evidence=IEA] InterPro:IPR000555
            Pfam:PF01398 SMART:SM00232 GO:GO:0005886 GO:GO:0005634
            GO:GO:0005737 OMA:DVPPRRY GeneTree:ENSGT00390000015439
            EMBL:AADN02042735 EMBL:AADN02042736 EMBL:AADN02042737
            IPI:IPI00591726 Ensembl:ENSGALT00000006746 Uniprot:E1BRS3
        Length = 431

 Score = 372 (136.0 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
 Identities = 70/143 (48%), Positives = 98/143 (68%)

Query:   334 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATN 393
             Q+ +   +   F++LA +NT + +ETCGIL G L   +F IT +I+PKQ    D C   N
Sbjct:   263 QVIVPRELCHKFLQLADANTARGVETCGILCGKLMRNEFTITHVIVPKQYGGPDYCNTEN 322

Query:   394 EEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRK 453
             EEE+F +QD+  L  LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+   ++
Sbjct:   323 EEELFLIQDQHGLVTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--YQE 380

Query:   454 HGIFRLTSPGGMSVIRQCQQRGF 476
              G F+LT  G +  I  C+Q+GF
Sbjct:   381 TGFFKLTEHG-LEEISSCRQKGF 402

 Score = 106 (42.4 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
 Identities = 50/227 (22%), Positives = 101/227 (44%)

Query:    17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASF 76
             ++V+  +  R YYR    IL+ A I+ EE NI   +++  ++ +L  E +P HRDY  + 
Sbjct:    29 VEVNEDVPPRRYYRSGVEILRMATIYSEEGNIEHAFILYNKYITLFIEKLPKHRDYKTAV 88

Query:    77 KSQXXXXXXXXXNALSELEELQ-PAVQQKINELNRKKTNQVTGWSHASQNSTLEWP-SLK 134
               +           + +L+E+  P  +    EL ++ T   T +    +    E   +L 
Sbjct:    89 IPEKK-------ETMKKLKEVAFPRAEDLKKELLQRYTKDYTKYIEQKKEKEEEDARNLA 141

Query:   135 KQTLTNYDVTKALRLPSRELAYQGSIP-QQLAYTRPVDEQFRRMSLNFPRPNAETLSRHS 193
              Q     +  +   +  ++   +  +  +++   + ++++  R++  F +P     S  S
Sbjct:   142 LQQQLEEERNRVALMKQQQAEQEQFLAFEEMIRRQELEKERLRIAQEFGKPEP---SPES 198

Query:   194 LLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIK 240
             L GP  + G  +PP +D   + P    L+PI  P+   PS  ++  K
Sbjct:   199 LDGPL-IPGMEKPP-TDLTPRVP----LSPIH-PA--SPSVGTVSSK 236


>ZFIN|ZDB-GENE-040426-1551 [details] [associations]
            symbol:stambpa "STAM binding protein a"
            species:7955 "Danio rerio" [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
            InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
            ZFIN:ZDB-GENE-040426-1551 GO:GO:0046872 GO:GO:0006508 GO:GO:0008237
            eggNOG:COG1310 HOGENOM:HOG000195792 KO:K11866 MEROPS:M67.006
            HOVERGEN:HBG058519 OrthoDB:EOG4B5P58 EMBL:AY398309 EMBL:BC055512
            EMBL:BC171484 IPI:IPI00503835 RefSeq:NP_956792.1 UniGene:Dr.75634
            GeneID:797422 KEGG:dre:797422 CTD:797422 InParanoid:Q6TH47
            NextBio:20933007 ArrayExpress:Q6TH47 Uniprot:Q6TH47
        Length = 418

 Score = 381 (139.2 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
 Identities = 73/143 (51%), Positives = 97/143 (67%)

Query:   334 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATN 393
             QL +   +   F+KLA++NT + +ETCGIL G L    F +T +I+PKQ    D C   N
Sbjct:   250 QLFVPAELCQRFLKLAETNTARAVETCGILCGKLMKNAFTVTHVIVPKQCGGPDYCDTEN 309

Query:   394 EEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRK 453
             EEE+F +QD+  L  LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+    +
Sbjct:   310 EEELFLIQDQNDLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FNE 367

Query:   454 HGIFRLTSPGGMSVIRQCQQRGF 476
              G FRLT  G M  +  C+QRGF
Sbjct:   368 TGYFRLTDYG-MDDVGTCKQRGF 389

 Score = 93 (37.8 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
 Identities = 21/83 (25%), Positives = 42/83 (50%)

Query:    17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDY-LAS 75
             +DV   +  R Y+R    I++ A+I+ +E N+   +++  ++ +L  E +P HR+Y  A+
Sbjct:    25 VDVSEDVPPRRYFRSGMEIIRMANIYADEGNVEHAFILYNKYITLFIEKLPKHREYKTAN 84

Query:    76 FKSQXXXXXXXXXNALSELEELQ 98
                +          A  + EEL+
Sbjct:    85 IPEKKETMRKLKEIAFPKAEELK 107


>ZFIN|ZDB-GENE-051127-31 [details] [associations]
            symbol:stambpb "STAM binding protein b" species:7955
            "Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000555 Pfam:PF01398
            SMART:SM00232 ZFIN:ZDB-GENE-051127-31 eggNOG:COG1310
            HOGENOM:HOG000195792 KO:K11866 MEROPS:M67.006 HOVERGEN:HBG058519
            OrthoDB:EOG4B5P58 EMBL:BC110110 IPI:IPI00497634
            RefSeq:NP_001032659.1 UniGene:Dr.150455 ProteinModelPortal:Q2YDQ9
            GeneID:641572 KEGG:dre:641572 CTD:641572 NextBio:20901616
            ArrayExpress:Q2YDQ9 Uniprot:Q2YDQ9
        Length = 418

 Score = 371 (135.7 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
 Identities = 71/143 (49%), Positives = 97/143 (67%)

Query:   334 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATN 393
             Q+ +   +   F++LA +NT + +ETCGIL G+L    F +T +++PKQ    D C   N
Sbjct:   250 QIAVPAELCGKFLRLANNNTIRAVETCGILCGTLNRNAFTVTHVVVPKQCGGPDYCDTEN 309

Query:   394 EEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRK 453
             EEE+F VQD+ +L  LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+    +
Sbjct:   310 EEELFLVQDQYNLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FNQ 367

Query:   454 HGIFRLTSPGGMSVIRQCQQRGF 476
              G FRLT  G M  I  C Q+GF
Sbjct:   368 TGYFRLTDYG-MEEISTCAQKGF 389

 Score = 84 (34.6 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
 Identities = 18/83 (21%), Positives = 42/83 (50%)

Query:    17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDY-LAS 75
             ++++  + LR Y+R    +++ A ++ EE N    +V+  ++ +L  E +P H +Y L++
Sbjct:    25 VEMNESVPLRRYFRSGMEMIRMAHVYAEEGNTEHAFVLYNKYITLFIEKLPKHPEYKLSN 84

Query:    76 FKSQXXXXXXXXXNALSELEELQ 98
                +          A  + E+L+
Sbjct:    85 IPEKKEILRKLKDTAFPQAEQLK 107


>ASPGD|ASPL0000038640 [details] [associations]
            symbol:AN3003 species:162425 "Emericella nidulans"
            [GO:0005768 "endosome" evidence=IEA] [GO:0030133 "transport
            vesicle" evidence=IEA] [GO:0032153 "cell division site"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0071585 "detoxification of cadmium ion"
            evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=IEA] [GO:0043328 "protein
            targeting to vacuole involved in ubiquitin-dependent protein
            catabolic process via the multivesicular body sorting pathway"
            evidence=IEA] [GO:0071276 "cellular response to cadmium ion"
            evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
            EMBL:BN001306 EMBL:AACD01000051 eggNOG:COG1310 HOGENOM:HOG000195792
            KO:K11866 OrthoDB:EOG4XPTQZ RefSeq:XP_660607.1
            ProteinModelPortal:Q5B8X7 EnsemblFungi:CADANIAT00010076
            GeneID:2873733 KEGG:ani:AN3003.2 OMA:TCFMSSR Uniprot:Q5B8X7
        Length = 544

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 108/310 (34%), Positives = 153/310 (49%)

Query:   205 QPPKSDKLVKYP-NNIDLTPI-EIPSL-RQPSESSIKIKTDSSNVEPEKSSVQSISTPND 261
             +P  S K V  P  ++  TP  + P++ RQ +     +  D    E  + +   +  P +
Sbjct:   242 RPQISSKSVTRPLADVSSTPTYKYPTVPRQKALDVPSVPVDIPKTEARELTKPPVLPPKE 301

Query:   262 EIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEVQDLIAAMSPQVTETECQVGN 321
               +   T +P  +      E P   D I Q  PP     V   +     +          
Sbjct:   302 SFQ---TSQPSGL------ELPPRPDKISQAVPPASAAAVPTKVPGDDKRKGLDPSSFTF 352

Query:   322 SLSDAFDRSEPLQ-LHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIP 380
               S   +   PL+ + +   +  +F+ LA SNT KNLETCGIL G+L +   +I+ L+IP
Sbjct:   353 KPSAYLENGTPLRTVFLPPQLRSHFLSLAASNTRKNLETCGILCGTLISNALFISRLLIP 412

Query:   381 KQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPES 440
             +Q STSD+C+  NE  IF+  D   L  LGWIHTHPTQ+CFMSS D+HTH  YQ+MLPES
Sbjct:   413 EQISTSDTCETVNESAIFDYCDSEDLMVLGWIHTHPTQTCFMSSRDLHTHCGYQVMLPES 472

Query:   441 VAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRG-FXXXXXXXXXXXIYKPCTDVYMNP 499
             +AIV AP   T   G+FRLT P G+  +  C Q G F             +P   V+   
Sbjct:   473 IAIVCAPSQ-TPNWGVFRLTDPPGLKSVLSCTQTGLFHPHAETNLYTDALRP-GHVFEAN 530

Query:   500 NLKFDVIDLR 509
              L+F+ +D R
Sbjct:   531 GLEFETVDQR 540


>UNIPROTKB|B3KR00 [details] [associations]
            symbol:STAMBPL1 "cDNA FLJ33359 fis, clone BRACE2005243,
            highly similar to AMSH-like protease (EC 3.1.2.15)" species:9606
            "Homo sapiens" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
            SMART:SM00232 GO:GO:0006508 EMBL:AL157394 GO:GO:0008233
            HOGENOM:HOG000195792 HOVERGEN:HBG058519 UniGene:Hs.16229
            UniGene:Hs.701879 HGNC:HGNC:24105 ChiTaRS:STAMBPL1 EMBL:AK090678
            IPI:IPI00640795 SMR:B3KR00 STRING:B3KR00 Ensembl:ENST00000371922
            Uniprot:B3KR00
        Length = 270

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 78/165 (47%), Positives = 109/165 (66%)

Query:   345 FMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKR 404
             F++LA+SNT + +ETCGIL G L + +F IT +I+PKQ +  D C   N EE+F VQD+ 
Sbjct:   113 FLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQH 172

Query:   405 SLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGG 464
              L  LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPE++AIV +P+   +  GIFRLT+  G
Sbjct:   173 DLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKH--KDTGIFRLTN-AG 229

Query:   465 MSVIRQCQQRGFXXXXXXXXXXXIYKPCTDVYMNPNLKFDVIDLR 509
             M  +  C+++GF           I   C  V +  ++K  V+DLR
Sbjct:   230 MLEVSACKKKGFHPHTKEPRLFSI---CKHVLVK-DIKIIVLDLR 270


>RGD|619963 [details] [associations]
            symbol:Stambp "Stam binding protein" species:10116 "Rattus
            norvegicus" [GO:0000281 "cytokinesis after mitosis"
            evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0005768 "endosome" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=IEA;ISO] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=IEA;ISO] [GO:0032154 "cleavage
            furrow" evidence=IEA;ISO] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA;ISO] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:619963
            GO:GO:0005634 GO:GO:0016020 GO:GO:0046872 GO:GO:0005768
            GO:GO:0006508 GO:GO:0008237 eggNOG:COG1310 HOGENOM:HOG000195792
            KO:K11866 MEROPS:M67.006 CTD:10617 HOVERGEN:HBG058519 OMA:DVPPRRY
            OrthoDB:EOG4B5P58 GeneTree:ENSGT00390000015439 EMBL:AY083159
            EMBL:BC061711 IPI:IPI00200044 RefSeq:NP_612540.1 UniGene:Rn.14662
            ProteinModelPortal:Q8R424 STRING:Q8R424 PhosphoSite:Q8R424
            PRIDE:Q8R424 Ensembl:ENSRNOT00000014708 GeneID:171565
            KEGG:rno:171565 UCSC:RGD:619963 InParanoid:Q8R424 NextBio:622575
            Genevestigator:Q8R424 GermOnline:ENSRNOG00000012227 Uniprot:Q8R424
        Length = 424

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 98/304 (32%), Positives = 151/304 (49%)

Query:   180 NFPRPNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTP-IEIPSLRQPSESSIK 238
             N   P AE L    L      Y  ++  K  +  +   NI +   +E    R   +   +
Sbjct:    97 NVAFPKAEELKTELLKRYTKEYEQYKERKKKEEEELARNIAIQQELEKEKQRVAQQKQKQ 156

Query:   239 IKTDSSNVEPEKSSVQSISTPNDEI--EIHRTEE-PCSMISFETSEAPNSADVI-RQPSP 294
             ++ +  +   +    Q +     +I  E  + +  PC  +     E P   DV    P  
Sbjct:   157 LEQEQFHAFEKMIQKQELEKERLKIVQEFGKVDPGPCGPL-LPDLEKP-CVDVAPSSPFS 214

Query:   295 PPVLTEVQDLIAAMSPQVTETECQVGN-SLSDAFDRSEPLQ-LHISTTMMDNFMKLAKSN 352
             P   ++    +    P V +   + G  S+ +     E L+ + +   +   F++LA +N
Sbjct:   215 PTQTSDCNTTLRPAKPPVVDRSLKPGALSVIENVPTIEGLRHIVVPRNLCSEFLQLASAN 274

Query:   353 TDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWI 412
             T K +ETCG+L G L   +F IT ++IP+Q    D C   NEEEIF +QD   L  LGWI
Sbjct:   275 TAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEEIFFMQDDLGLLTLGWI 334

Query:   413 HTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQ 472
             HTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+   ++ G F+LT  G +  I  C+
Sbjct:   335 HTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FQETGFFKLTDYG-LQEISTCR 391

Query:   473 QRGF 476
             Q+GF
Sbjct:   392 QKGF 395


>UNIPROTKB|C9JK83 [details] [associations]
            symbol:STAMBP "STAM-binding protein" species:9606 "Homo
            sapiens" [GO:0032154 "cleavage furrow" evidence=IEA] [GO:0043066
            "negative regulation of apoptotic process" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
            "plasma membrane" evidence=IDA] GO:GO:0005886 GO:GO:0005634
            GO:GO:0005737 EMBL:AC073046 HOGENOM:HOG000195792 HGNC:HGNC:16950
            IPI:IPI00917973 ProteinModelPortal:C9JK83 SMR:C9JK83 STRING:C9JK83
            Ensembl:ENST00000432295 ArrayExpress:C9JK83 Bgee:C9JK83
            Uniprot:C9JK83
        Length = 318

 Score = 145 (56.1 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
 Identities = 34/90 (37%), Positives = 51/90 (56%)

Query:   310 PQVTETECQVGN-SLSDAFDRSEPLQLHISTT--MMDNFMKLAKSNTDKNLETCGILAGS 366
             P V +   + G  S S++    + L+ H+     +   F++LA +NT + +ETCGIL G 
Sbjct:   230 PPVVDRSLKPGALSNSESIPTIDGLR-HVVVPGRLCPQFLQLASANTARGVETCGILCGK 288

Query:   367 LKNRKFYITALIIPKQESTSDSCQATNEEE 396
             L   +F IT ++IPKQ + SD C   NEEE
Sbjct:   289 LMRNEFTITHVLIPKQSAGSDYCNTENEEE 318

 Score = 100 (40.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
 Identities = 27/114 (23%), Positives = 57/114 (50%)

Query:    17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASF 76
             ++V+  I  R Y+R    I++ A I+ EE NI   +++  ++ +L  E +P HRDY ++ 
Sbjct:    25 VEVNEDIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRDYKSAV 84

Query:    77 KSQXXXXXXXXXNALSELEELQ-PAVQQKINELNRKKTNQVTGWSHASQNSTLE 129
               +         + + +L+E+  P  ++   EL ++ T + T ++   +    E
Sbjct:    85 IPEKK-------DTVKKLKEIAFPKAEELKAELLKRYTKEYTEYNEEKKKEAEE 131


>DICTYBASE|DDB_G0272566 [details] [associations]
            symbol:psmD14 "putative multidrug resistance protein"
            species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
            vesicle" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=ISS] [GO:0004175 "endopeptidase
            activity" evidence=ISS] [GO:0000502 "proteasome complex"
            evidence=IEA;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008237
            "metallopeptidase activity" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000555
            Pfam:PF01398 SMART:SM00232 dictyBase:DDB_G0272566 GO:GO:0045335
            GO:GO:0046872 GenomeReviews:CM000151_GR GO:GO:0008237 GO:GO:0004175
            EMBL:AAFI02000008 GO:GO:0000502 GO:GO:0006511 eggNOG:COG1310
            MEROPS:M67.001 InterPro:IPR024969 Pfam:PF13012 KO:K03030
            OMA:MVLGQEP EMBL:U96916 RefSeq:XP_644863.1
            ProteinModelPortal:Q86IJ1 STRING:Q86IJ1 EnsemblProtists:DDB0191298
            GeneID:8618542 KEGG:ddi:DDB_G0272566 ProtClustDB:CLSZ2438686
            Uniprot:Q86IJ1
        Length = 306

 Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 38/142 (26%), Positives = 74/142 (52%)

Query:   319 VGNSLSDAFDRSEPLQ-LHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFY--IT 375
             +G  ++DA    +  + +HIS+  +   ++ A++     LE  G++ G L +      I 
Sbjct:    14 LGEKITDATPLPDTAETIHISSLALLKMLQHARAGVP--LEVMGLMLGELIDEYTIRVID 71

Query:   376 ALIIPKQESTSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTH 430
                +P Q  TS S +A +   + ++ ++  Q  R    +GW H+HP   C++SS+DV+T 
Sbjct:    72 VFAMP-QSGTSVSVEAIDPVFQTKMLDMLKQTGRDEIVIGWYHSHPGFGCWLSSVDVNTQ 130

Query:   431 YSYQIMLPESVAIVMAPQDATR 452
              S++ +   +VA+V+ P  + R
Sbjct:   131 QSFEQLQSRAVAVVVDPLQSVR 152


>ASPGD|ASPL0000076795 [details] [associations]
            symbol:AN4492 species:162425 "Emericella nidulans"
            [GO:0033554 "cellular response to stress" evidence=IEA] [GO:0043161
            "proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0035690 "cellular response to drug" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0000266
            "mitochondrial fission" evidence=IEA] [GO:0016559 "peroxisome
            fission" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0008541 "proteasome regulatory
            particle, lid subcomplex" evidence=IEA] [GO:0034399 "nuclear
            periphery" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0034515 "proteasome storage granule" evidence=IEA]
            InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0000502
            EMBL:BN001303 InterPro:IPR024969 Pfam:PF13012
            EnsemblFungi:CADANIAT00005953 OMA:GHAGADQ Uniprot:C8V8E2
        Length = 338

 Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 40/152 (26%), Positives = 74/152 (48%)

Query:   320 GNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNR-KFYITALI 378
             G    +  D SE +  HIS+  +   ++  ++     +E  G++ G   +     +T + 
Sbjct:    22 GADTPNLLDNSETV--HISSLALLKMLRHGRAGVP--MEVMGLMLGEFVDEYTVRVTDVF 77

Query:   379 IPKQESTSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSY 433
                Q  T  S +A +   + ++ ++  Q  R    +GW H+HP   C++SS+D++T  S+
Sbjct:    78 AMPQSGTGVSVEAVDPVFQTKMMDMLRQTGRPEPVVGWYHSHPGFGCWLSSVDINTQQSF 137

Query:   434 QIMLPESVAIVMAP-QDATRKHGI--FRLTSP 462
             + + P +VA+V+ P Q    K  I  FRL  P
Sbjct:   138 EQLTPRAVAVVVDPIQSVKGKVVIDAFRLIQP 169


>POMBASE|SPAC31G5.13 [details] [associations]
            symbol:rpn11 "19S proteasome regulatory subunit Rpn11"
            species:4896 "Schizosaccharomyces pombe" [GO:0000502 "proteasome
            complex" evidence=IDA;IPI] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
            [GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0033554
            "cellular response to stress" evidence=IMP] [GO:0034399 "nuclear
            periphery" evidence=IDA] [GO:0035690 "cellular response to drug"
            evidence=IMP] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=IC] [GO:0046898 "response to
            cycloheximide" evidence=IEA] [GO:0071947 "protein deubiquitination
            involved in ubiquitin-dependent protein catabolic process"
            evidence=IC] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
            PomBase:SPAC31G5.13 GO:GO:0007346 EMBL:CU329670 GO:GO:0043161
            GenomeReviews:CU329670_GR GO:GO:0033554 GO:GO:0046677 GO:GO:0035690
            GO:GO:0000502 eggNOG:COG1310 GO:GO:0071313 GO:GO:0097237
            GO:GO:0034399 MEROPS:M67.001 GO:GO:0004843 GO:GO:0046898
            InterPro:IPR024969 Pfam:PF13012 EMBL:D84656 HOGENOM:HOG000183690
            KO:K03030 OMA:MVLGQEP EMBL:D31731 EMBL:D45047 PIR:T43293 PIR:T44427
            RefSeq:NP_594014.1 ProteinModelPortal:P41878 IntAct:P41878
            STRING:P41878 PRIDE:P41878 EnsemblFungi:SPAC31G5.13.1
            GeneID:2543040 KEGG:spo:SPAC31G5.13 OrthoDB:EOG40CMRT
            NextBio:20804070 GO:GO:0071947 Uniprot:P41878
        Length = 308

 Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
 Identities = 39/155 (25%), Positives = 79/155 (50%)

Query:   328 DRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQESTS 386
             D SE +  +IS+  +   ++  +  T   +E  G++ G  + +    +  +    Q  T 
Sbjct:    25 DNSECV--YISSLALLKMLRHGRHGTP--MEVMGLMLGEFVDDFTVRVVDVFAMPQSGTG 80

Query:   387 DSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESV 441
              S +A +   ++ + ++  Q  R    +GW H+HP   C++SS+D++T  S++ + P +V
Sbjct:    81 VSVEAVDPVFQKNMMDMLKQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAV 140

Query:   442 AIVMAP-QDATRKHGI--FRLTSPGGMSVIRQCQQ 473
             A+V+ P Q    K  I  FRL +P  + + ++ +Q
Sbjct:   141 AVVVDPIQSVKGKVVIDAFRLINPSTLMMGQEPRQ 175


>WB|WBGene00018135 [details] [associations]
            symbol:F37A4.5 species:6239 "Caenorhabditis elegans"
            [GO:0000003 "reproduction" evidence=IMP] InterPro:IPR000555
            Pfam:PF01398 SMART:SM00232 GO:GO:0000003 eggNOG:COG1310
            EMBL:FO081312 InterPro:IPR024969 Pfam:PF13012
            GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690 KO:K03030
            PIR:S44642 RefSeq:NP_498470.1 UniGene:Cel.10529
            ProteinModelPortal:P41883 SMR:P41883 IntAct:P41883 STRING:P41883
            MEROPS:M67.A10 PaxDb:P41883 PRIDE:P41883 EnsemblMetazoa:F37A4.5.1
            EnsemblMetazoa:F37A4.5.2 GeneID:185404 KEGG:cel:CELE_F37A4.5
            UCSC:F37A4.5 CTD:185404 WormBase:F37A4.5 InParanoid:P41883
            OMA:KMLRHAR NextBio:928158 Uniprot:P41883
        Length = 319

 Score = 124 (48.7 bits), Expect = 7.7e-05, P = 7.7e-05
 Identities = 39/155 (25%), Positives = 76/155 (49%)

Query:   324 SDAFDRSEPLQ-LHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPK 381
             +D  D  +  + ++IS+  +   ++ A+S     LE  G++ G  + +    +T +    
Sbjct:    17 TDKLDHPDTSETVNISSLALLKMLRHARSGIP--LEVMGLMLGDFVDDYTINVTDVFAMP 74

Query:   382 QESTS------DSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQI 435
             Q  TS      D    T   ++ ++   R+   +GW H+HP   C++SS+DV+T  S++ 
Sbjct:    75 QSGTSVTVESVDPVYQTKHMDLLKLVG-RTENVVGWYHSHPGFGCWLSSVDVNTQQSFEA 133

Query:   436 MLPESVAIVMAP-QDATRKHGI--FRLTSPGGMSV 467
             + P +VA+V+ P Q    K  +  FR  +P  + +
Sbjct:   134 LHPRAVAVVVDPIQSVKGKVMLDAFRSVNPLNLQI 168


>UNIPROTKB|C9JZ93 [details] [associations]
            symbol:STAMBP "STAM-binding protein" species:9606 "Homo
            sapiens" [GO:0032154 "cleavage furrow" evidence=IEA] [GO:0043066
            "negative regulation of apoptotic process" evidence=IEA]
            EMBL:AC073046 HGNC:HGNC:16950 InterPro:IPR015063 Pfam:PF08969
            IPI:IPI00916971 ProteinModelPortal:C9JZ93 SMR:C9JZ93 STRING:C9JZ93
            Ensembl:ENST00000452725 ArrayExpress:C9JZ93 Bgee:C9JZ93
            Uniprot:C9JZ93
        Length = 137

 Score = 100 (40.3 bits), Expect = 0.00020, P = 0.00020
 Identities = 27/114 (23%), Positives = 57/114 (50%)

Query:    17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASF 76
             ++V+  I  R Y+R    I++ A I+ EE NI   +++  ++ +L  E +P HRDY ++ 
Sbjct:    25 VEVNEDIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRDYKSAV 84

Query:    77 KSQXXXXXXXXXNALSELEELQ-PAVQQKINELNRKKTNQVTGWSHASQNSTLE 129
               +         + + +L+E+  P  ++   EL ++ T + T ++   +    E
Sbjct:    85 IPEKK-------DTVKKLKEIAFPKAEELKAELLKRYTKEYTEYNEEKKKEAEE 131


>FB|FBgn0028694 [details] [associations]
            symbol:Rpn11 "Regulatory particle non-ATPase 11" species:7227
            "Drosophila melanogaster" [GO:0008541 "proteasome regulatory
            particle, lid subcomplex" evidence=ISS;NAS] [GO:0005838 "proteasome
            regulatory particle" evidence=ISS;IDA] [GO:0004175 "endopeptidase
            activity" evidence=IDA] [GO:0006508 "proteolysis"
            evidence=ISS;IMP;IDA] [GO:0009987 "cellular process" evidence=IMP]
            [GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
            protein catabolic process" evidence=IMP] [GO:0005875 "microtubule
            associated complex" evidence=IDA] InterPro:IPR000555 Pfam:PF01398
            SMART:SM00232 GO:GO:0005875 EMBL:AE014134 GO:GO:0046872
            GO:GO:0006508 GO:GO:0008237 GO:GO:0004175 GO:GO:0008541
            GO:GO:0032436 GO:GO:0009987 eggNOG:COG1310 MEROPS:M67.001
            InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00550000074674
            KO:K03030 OMA:MVLGQEP EMBL:AF145313 EMBL:AY070977 EMBL:AF195189
            RefSeq:NP_608905.1 UniGene:Dm.3343 ProteinModelPortal:Q9V3H2
            SMR:Q9V3H2 IntAct:Q9V3H2 MINT:MINT-819727 STRING:Q9V3H2
            PaxDb:Q9V3H2 PRIDE:Q9V3H2 EnsemblMetazoa:FBtr0079027 GeneID:33738
            KEGG:dme:Dmel_CG18174 CTD:33738 FlyBase:FBgn0028694
            InParanoid:Q9V3H2 OrthoDB:EOG4SQVC9 PhylomeDB:Q9V3H2
            GenomeRNAi:33738 NextBio:785010 Bgee:Q9V3H2 GermOnline:CG18174
            Uniprot:Q9V3H2
        Length = 308

 Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
 Identities = 37/146 (25%), Positives = 73/146 (50%)

Query:   334 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQESTSDSCQAT 392
             Q++IS+  +   +K  ++     +E  G++ G  + +    +  +    Q  T  S +A 
Sbjct:    28 QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAV 85

Query:   393 N---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 447
             +   + ++ ++  Q  R    +GW H+HP   C++S +D++T  S++ +   +VA+V+ P
Sbjct:    86 DPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDP 145

Query:   448 -QDATRKHGI--FRLTSPGGMSVIRQ 470
              Q    K  I  FRL +P  M V+ Q
Sbjct:   146 IQSVKGKVVIDAFRLINPN-MLVLGQ 170


>WB|WBGene00004467 [details] [associations]
            symbol:rpn-11 species:6239 "Caenorhabditis elegans"
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IMP] [GO:0008340 "determination of adult lifespan"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0040007 "growth"
            evidence=IMP] [GO:0005838 "proteasome regulatory particle"
            evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0008340
            GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
            GO:GO:0006508 GO:GO:0040011 GO:GO:0008237 eggNOG:COG1310
            InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00550000074674
            GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
            EMBL:FO081599 PIR:T33344 RefSeq:NP_494712.1
            ProteinModelPortal:O76577 SMR:O76577 IntAct:O76577 MINT:MINT-211040
            STRING:O76577 MEROPS:M67.A11 PaxDb:O76577 PRIDE:O76577
            EnsemblMetazoa:K07D4.3.1 EnsemblMetazoa:K07D4.3.2 GeneID:173744
            KEGG:cel:CELE_K07D4.3 UCSC:K07D4.3.1 CTD:173744 WormBase:K07D4.3
            InParanoid:O76577 NextBio:880901 Uniprot:O76577
        Length = 312

 Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
 Identities = 38/159 (23%), Positives = 79/159 (49%)

Query:   324 SDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQ 382
             S+  D SE +  +IS+  +   +K  ++     +E  G++ G  + +    +  +    Q
Sbjct:    24 SNQVDTSETV--YISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVNVIDVFAMPQ 79

Query:   383 ESTSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIML 437
               T  S +A +   + ++ ++  Q  R    +GW H+HP   C++S +D++T  S++ + 
Sbjct:    80 SGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALS 139

Query:   438 PESVAIVMAP-QDATRKHGI--FRLTSPGGMSVIRQCQQ 473
               +VA+V+ P Q    K  I  FR  +P  M++ ++ +Q
Sbjct:   140 DRAVAVVVDPIQSVKGKVVIDAFRTINPQSMALNQEPRQ 178


>UNIPROTKB|O76577 [details] [associations]
            symbol:rpn-11 "26S proteasome non-ATPase regulatory subunit
            14" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
            binding" evidence=IPI] InterPro:IPR000555 Pfam:PF01398
            SMART:SM00232 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
            GO:GO:0002119 GO:GO:0046872 GO:GO:0006508 GO:GO:0040011
            GO:GO:0008237 eggNOG:COG1310 InterPro:IPR024969 Pfam:PF13012
            GeneTree:ENSGT00550000074674 GO:GO:0005838 HOGENOM:HOG000183690
            KO:K03030 OMA:MVLGQEP EMBL:FO081599 PIR:T33344 RefSeq:NP_494712.1
            ProteinModelPortal:O76577 SMR:O76577 IntAct:O76577 MINT:MINT-211040
            STRING:O76577 MEROPS:M67.A11 PaxDb:O76577 PRIDE:O76577
            EnsemblMetazoa:K07D4.3.1 EnsemblMetazoa:K07D4.3.2 GeneID:173744
            KEGG:cel:CELE_K07D4.3 UCSC:K07D4.3.1 CTD:173744 WormBase:K07D4.3
            InParanoid:O76577 NextBio:880901 Uniprot:O76577
        Length = 312

 Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
 Identities = 38/159 (23%), Positives = 79/159 (49%)

Query:   324 SDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQ 382
             S+  D SE +  +IS+  +   +K  ++     +E  G++ G  + +    +  +    Q
Sbjct:    24 SNQVDTSETV--YISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVNVIDVFAMPQ 79

Query:   383 ESTSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIML 437
               T  S +A +   + ++ ++  Q  R    +GW H+HP   C++S +D++T  S++ + 
Sbjct:    80 SGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALS 139

Query:   438 PESVAIVMAP-QDATRKHGI--FRLTSPGGMSVIRQCQQ 473
               +VA+V+ P Q    K  I  FR  +P  M++ ++ +Q
Sbjct:   140 DRAVAVVVDPIQSVKGKVVIDAFRTINPQSMALNQEPRQ 178


>GENEDB_PFALCIPARUM|MAL13P1.343 [details] [associations]
            symbol:MAL13P1.343 "proteasome regulatory
            subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0005838 "proteasome regulatory particle" evidence=ISS]
            InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006511
            MEROPS:M67.001 EMBL:AL844509 InterPro:IPR024969 Pfam:PF13012
            GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
            ProtClustDB:CLSZ2438686 RefSeq:XP_001350391.1
            ProteinModelPortal:Q8ID28 IntAct:Q8ID28 MINT:MINT-1606262
            EnsemblProtists:MAL13P1.343:mRNA GeneID:813911 KEGG:pfa:MAL13P1.343
            EuPathDB:PlasmoDB:PF3D7_1368100 Uniprot:Q8ID28
        Length = 311

 Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
 Identities = 41/154 (26%), Positives = 73/154 (47%)

Query:   320 GNSLSDAF--DRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNR-KFYITA 376
             GN +++    D SE  Q++IS   +   +K  ++     +E  G++ G + +     I  
Sbjct:    18 GNGMNNETLADTSE--QVYISPLALLKILKHGRAGVP--MEVMGLMLGEIVDEYTIRIVD 73

Query:   377 LIIPKQESTSDSCQATN---EEEIFEVQDK--RSLFPLGWIHTHPTQSCFMSSIDVHTHY 431
             +    Q   S S +A +   +  + E   K  R    +GW H+HP   C++S  DV+T  
Sbjct:    74 VFAMPQSGNSVSVEAVDPVYQTNMLEELKKTGRHEMVVGWYHSHPGFGCWLSGTDVNTQK 133

Query:   432 SYQIMLPESVAIVMAP-QDATRKHGI--FRLTSP 462
             S++ + P ++ +V+ P Q    K  I  FRL +P
Sbjct:   134 SFEQLNPRTIGVVVDPIQSVKGKVVIDCFRLINP 167


>UNIPROTKB|Q8ID28 [details] [associations]
            symbol:MAL13P1.343 "Proteasome regulatory subunit,
            putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
            "proteasome regulatory particle" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006511
            MEROPS:M67.001 EMBL:AL844509 InterPro:IPR024969 Pfam:PF13012
            GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
            ProtClustDB:CLSZ2438686 RefSeq:XP_001350391.1
            ProteinModelPortal:Q8ID28 IntAct:Q8ID28 MINT:MINT-1606262
            EnsemblProtists:MAL13P1.343:mRNA GeneID:813911 KEGG:pfa:MAL13P1.343
            EuPathDB:PlasmoDB:PF3D7_1368100 Uniprot:Q8ID28
        Length = 311

 Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
 Identities = 41/154 (26%), Positives = 73/154 (47%)

Query:   320 GNSLSDAF--DRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNR-KFYITA 376
             GN +++    D SE  Q++IS   +   +K  ++     +E  G++ G + +     I  
Sbjct:    18 GNGMNNETLADTSE--QVYISPLALLKILKHGRAGVP--MEVMGLMLGEIVDEYTIRIVD 73

Query:   377 LIIPKQESTSDSCQATN---EEEIFEVQDK--RSLFPLGWIHTHPTQSCFMSSIDVHTHY 431
             +    Q   S S +A +   +  + E   K  R    +GW H+HP   C++S  DV+T  
Sbjct:    74 VFAMPQSGNSVSVEAVDPVYQTNMLEELKKTGRHEMVVGWYHSHPGFGCWLSGTDVNTQK 133

Query:   432 SYQIMLPESVAIVMAP-QDATRKHGI--FRLTSP 462
             S++ + P ++ +V+ P Q    K  I  FRL +P
Sbjct:   134 SFEQLNPRTIGVVVDPIQSVKGKVVIDCFRLINP 167


>CGD|CAL0003932 [details] [associations]
            symbol:orf19.7264 species:5476 "Candida albicans" [GO:0008541
            "proteasome regulatory particle, lid subcomplex" evidence=IEA]
            [GO:0034399 "nuclear periphery" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0034515 "proteasome storage
            granule" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0000266 "mitochondrial fission"
            evidence=IEA] [GO:0016559 "peroxisome fission" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 CGD:CAL0003932
            eggNOG:COG1310 MEROPS:M67.001 InterPro:IPR024969 Pfam:PF13012
            EMBL:AACQ01000092 HOGENOM:HOG000183690 KO:K03030 RefSeq:XP_715061.1
            ProteinModelPortal:Q59ZS7 STRING:Q59ZS7 GeneID:3643326
            KEGG:cal:CaO19.7264 Uniprot:Q59ZS7
        Length = 312

 Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
 Identities = 32/128 (25%), Positives = 66/128 (51%)

Query:   326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 384
             A D SE +  +IS+  +   +K  ++     +E  G++ G  + +   ++  +    Q  
Sbjct:    26 AIDNSETV--YISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDFTIHVHDVFAMPQSG 81

Query:   385 TSDSCQATNE---EEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPE 439
             T  S +A ++    ++ ++  Q  R    +GW H+HP   C++SS+DV+T  S++ +   
Sbjct:    82 TGVSVEAVDDVFQTKMMDMLRQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQQSFEQLNKR 141

Query:   440 SVAIVMAP 447
             +VA+V+ P
Sbjct:   142 AVAVVIDP 149


>SGD|S000001900 [details] [associations]
            symbol:RPN11 "Metalloprotease subunit of the 19S regulatory
            particle of the 26S pro" species:4932 "Saccharomyces cerevisiae"
            [GO:0016559 "peroxisome fission" evidence=IMP] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0000502 "proteasome complex" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IMP] [GO:0008237
            "metallopeptidase activity" evidence=ISS] [GO:0016579 "protein
            deubiquitination" evidence=IGI;IMP] [GO:0043161 "proteasomal
            ubiquitin-dependent protein catabolic process" evidence=IMP]
            [GO:0008541 "proteasome regulatory particle, lid subcomplex"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0034515
            "proteasome storage granule" evidence=IDA] [GO:0000266
            "mitochondrial fission" evidence=IMP] InterPro:IPR000555
            Pfam:PF01398 SMART:SM00232 SGD:S000001900 GO:GO:0005739
            GO:GO:0005634 GO:GO:0043161 EMBL:D50617 EMBL:BK006940 GO:GO:0008237
            GO:GO:0016559 GO:GO:0008541 eggNOG:COG1310 MEROPS:M67.001
            GO:GO:0004843 GO:GO:0016579 GO:GO:0000266 InterPro:IPR024969
            Pfam:PF13012 GeneTree:ENSGT00550000074674 GO:GO:0034515 PDB:4B4T
            PDBsum:4B4T HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
            OrthoDB:EOG40CMRT EMBL:X79561 EMBL:AY152546 EMBL:AY692755
            PIR:S56259 RefSeq:NP_116659.1 ProteinModelPortal:P43588 SMR:P43588
            DIP:DIP-1573N IntAct:P43588 MINT:MINT-405184 STRING:P43588
            PaxDb:P43588 PeptideAtlas:P43588 PRIDE:P43588 EnsemblFungi:YFR004W
            GeneID:850554 KEGG:sce:YFR004W CYGD:YFR004w NextBio:966339
            Genevestigator:P43588 GermOnline:YFR004W Uniprot:P43588
        Length = 306

 Score = 118 (46.6 bits), Expect = 0.00033, P = 0.00033
 Identities = 39/157 (24%), Positives = 77/157 (49%)

Query:   318 QVGNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITA 376
             +VG++ +   D  E +  +IS+  +   +K  ++     +E  G++ G  + +    +  
Sbjct:    12 KVGSADTGRDDTKETV--YISSIALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVNVVD 67

Query:   377 LIIPKQESTSDSCQATNE---EEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHY 431
             +    Q  T  S +A ++    ++ ++  Q  R    +GW H+HP   C++SS+DV+T  
Sbjct:    68 VFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQK 127

Query:   432 SYQIMLPESVAIVMAP-QDATRKHGI--FRLTSPGGM 465
             S++ +   +VA+V+ P Q    K  I  FRL   G +
Sbjct:   128 SFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLIDTGAL 164


>TAIR|locus:2171696 [details] [associations]
            symbol:AT5G23540 "AT5G23540" species:3702 "Arabidopsis
            thaliana" [GO:0008541 "proteasome regulatory particle, lid
            subcomplex" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=RCA;TAS] [GO:0005634 "nucleus"
            evidence=TAS] [GO:0030163 "protein catabolic process" evidence=TAS]
            [GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0000502
            "proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006096 "glycolysis" evidence=RCA] [GO:0006499
            "N-terminal protein myristoylation" evidence=RCA] [GO:0006623
            "protein targeting to vacuole" evidence=RCA] [GO:0006635 "fatty
            acid beta-oxidation" evidence=RCA] [GO:0006833 "water transport"
            evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
            [GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
            "response to temperature stimulus" evidence=RCA] [GO:0009407 "toxin
            catabolic process" evidence=RCA] [GO:0009640 "photomorphogenesis"
            evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
            [GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0043161
            "proteasomal ubiquitin-dependent protein catabolic process"
            evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
            [GO:0046686 "response to cadmium ion" evidence=RCA] [GO:0051788
            "response to misfolded protein" evidence=RCA] [GO:0080129
            "proteasome core complex assembly" evidence=RCA] InterPro:IPR000555
            Pfam:PF01398 SMART:SM00232 GO:GO:0005829 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0009651
            GO:GO:0006508 GO:GO:0008237 GO:GO:0030163 GO:GO:0000502
            eggNOG:COG1310 MEROPS:M67.001 EMBL:AB025633 InterPro:IPR024969
            Pfam:PF13012 EMBL:AY230843 EMBL:AY230844 EMBL:AY230845
            EMBL:AY070073 EMBL:AY091329 EMBL:AY086277 IPI:IPI00538427
            RefSeq:NP_197745.1 UniGene:At.22926 ProteinModelPortal:Q9LT08
            SMR:Q9LT08 IntAct:Q9LT08 STRING:Q9LT08 PaxDb:Q9LT08 PRIDE:Q9LT08
            DNASU:832420 EnsemblPlants:AT5G23540.1 GeneID:832420
            KEGG:ath:AT5G23540 TAIR:At5g23540 HOGENOM:HOG000183690
            InParanoid:Q9LT08 KO:K03030 OMA:MVLGQEP PhylomeDB:Q9LT08
            ProtClustDB:CLSN2686290 Genevestigator:Q9LT08 GermOnline:AT5G23540
            Uniprot:Q9LT08
        Length = 308

 Score = 116 (45.9 bits), Expect = 0.00056, P = 0.00056
 Identities = 37/148 (25%), Positives = 70/148 (47%)

Query:   324 SDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNR-KFYITALIIPKQ 382
             S   D SE  Q++IS+  +   +K  ++     +E  G++ G   +     +  +    Q
Sbjct:    21 SPTLDTSE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDEYTVRVVDVFAMPQ 76

Query:   383 ESTSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIML 437
               T  S +A +   +  + ++  Q  R    +GW H+HP   C++S +D++T  S++ + 
Sbjct:    77 SGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALN 136

Query:   438 PESVAIVMAP-QDATRKHGI--FRLTSP 462
               +VA+V+ P Q    K  I  FR  +P
Sbjct:   137 QRAVAVVVDPIQSVKGKVVIDAFRSINP 164


>UNIPROTKB|F1LMW6 [details] [associations]
            symbol:Psmd14 "Protein Psmd14" species:10116 "Rattus
            norvegicus" [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=IEA] [GO:0006303 "double-strand break
            repair via nonhomologous end joining" evidence=IEA] [GO:0008541
            "proteasome regulatory particle, lid subcomplex" evidence=IEA]
            [GO:0061133 "endopeptidase activator activity" evidence=IEA]
            [GO:0061136 "regulation of proteasomal protein catabolic process"
            evidence=IEA] [GO:0070628 "proteasome binding" evidence=IEA]
            InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1594532
            GO:GO:0061133 GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
            GeneTree:ENSGT00550000074674 IPI:IPI00372125
            Ensembl:ENSRNOT00000006605 ArrayExpress:F1LMW6 Uniprot:F1LMW6
        Length = 294

 Score = 114 (45.2 bits), Expect = 0.00085, P = 0.00085
 Identities = 37/149 (24%), Positives = 73/149 (48%)

Query:   326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 384
             A D +E  Q++IS+  +   +K  ++     +E  G++ G  + +    +  +    Q  
Sbjct:     8 AVDTAE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVIDVFAMPQSG 63

Query:   385 TSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPE 439
             T  S +A +   + ++ ++  Q  R    +GW H+HP   C++S +D++T  S++ +   
Sbjct:    64 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 123

Query:   440 SVAIVMAP-QDATRKHGI--FRLTSPGGM 465
             +VA+V+ P Q    K  I  FRL +   M
Sbjct:   124 AVAVVVDPIQSVKGKVVIDAFRLINANMM 152


>UNIPROTKB|E1C6N0 [details] [associations]
            symbol:PSMD14 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000724 "double-strand break repair via
            homologous recombination" evidence=IEA] [GO:0006303 "double-strand
            break repair via nonhomologous end joining" evidence=IEA]
            [GO:0008541 "proteasome regulatory particle, lid subcomplex"
            evidence=IEA] [GO:0061133 "endopeptidase activator activity"
            evidence=IEA] [GO:0061136 "regulation of proteasomal protein
            catabolic process" evidence=IEA] [GO:0070628 "proteasome binding"
            evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
            GO:GO:0061133 GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
            GeneTree:ENSGT00550000074674 OMA:MVLGQEP EMBL:AADN02058674
            IPI:IPI00604055 Ensembl:ENSGALT00000018142 ArrayExpress:E1C6N0
            Uniprot:E1C6N0
        Length = 300

 Score = 114 (45.2 bits), Expect = 0.00089, P = 0.00089
 Identities = 37/149 (24%), Positives = 73/149 (48%)

Query:   326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 384
             A D +E  Q++IS+  +   +K  ++     +E  G++ G  + +    +  +    Q  
Sbjct:    14 AVDTAE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVIDVFAMPQSG 69

Query:   385 TSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPE 439
             T  S +A +   + ++ ++  Q  R    +GW H+HP   C++S +D++T  S++ +   
Sbjct:    70 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 129

Query:   440 SVAIVMAP-QDATRKHGI--FRLTSPGGM 465
             +VA+V+ P Q    K  I  FRL +   M
Sbjct:   130 AVAVVVDPIQSVKGKVVIDAFRLINANMM 158


>UNIPROTKB|Q17QP9 [details] [associations]
            symbol:PSMD14 "Proteasome (Prosome, macropain) 26S subunit,
            non-ATPase, 14" species:9913 "Bos taurus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IDA] [GO:0070628 "proteasome
            binding" evidence=IDA] [GO:0061136 "regulation of proteasomal
            protein catabolic process" evidence=IEA] [GO:0061133 "endopeptidase
            activator activity" evidence=IEA] [GO:0008541 "proteasome
            regulatory particle, lid subcomplex" evidence=IEA] [GO:0006303
            "double-strand break repair via nonhomologous end joining"
            evidence=IEA] [GO:0000724 "double-strand break repair via
            homologous recombination" evidence=IEA] InterPro:IPR000555
            Pfam:PF01398 SMART:SM00232 GO:GO:0000502 GO:GO:0061133
            GO:GO:0070628 eggNOG:COG1310 MEROPS:M67.001 GO:GO:0004221
            GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
            GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690 KO:K03030
            OMA:MVLGQEP CTD:10213 HOVERGEN:HBG053742 OrthoDB:EOG4R23V7
            EMBL:DAAA02004429 EMBL:DAAA02004430 EMBL:BC118241 IPI:IPI00689118
            RefSeq:NP_001069535.1 UniGene:Bt.31257 SMR:Q17QP9 STRING:Q17QP9
            Ensembl:ENSBTAT00000046166 GeneID:535683 KEGG:bta:535683
            InParanoid:Q17QP9 NextBio:20876811 Uniprot:Q17QP9
        Length = 310

 Score = 114 (45.2 bits), Expect = 0.00095, P = 0.00095
 Identities = 37/149 (24%), Positives = 73/149 (48%)

Query:   326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 384
             A D +E  Q++IS+  +   +K  ++     +E  G++ G  + +    +  +    Q  
Sbjct:    24 AVDTAE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVIDVFAMPQSG 79

Query:   385 TSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPE 439
             T  S +A +   + ++ ++  Q  R    +GW H+HP   C++S +D++T  S++ +   
Sbjct:    80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 139

Query:   440 SVAIVMAP-QDATRKHGI--FRLTSPGGM 465
             +VA+V+ P Q    K  I  FRL +   M
Sbjct:   140 AVAVVVDPIQSVKGKVVIDAFRLINANMM 168


>UNIPROTKB|O00487 [details] [associations]
            symbol:PSMD14 "26S proteasome non-ATPase regulatory subunit
            14" species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0000502 "proteasome complex" evidence=TAS]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IMP;TAS]
            [GO:0008237 "metallopeptidase activity" evidence=TAS] [GO:0070536
            "protein K63-linked deubiquitination" evidence=IMP;TAS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0061133 "endopeptidase activator activity" evidence=IMP]
            [GO:0061136 "regulation of proteasomal protein catabolic process"
            evidence=IMP] [GO:0070628 "proteasome binding" evidence=IDA]
            [GO:0008541 "proteasome regulatory particle, lid subcomplex"
            evidence=IMP] [GO:0006303 "double-strand break repair via
            nonhomologous end joining" evidence=IMP] [GO:0000724 "double-strand
            break repair via homologous recombination" evidence=IMP]
            [GO:0022624 "proteasome accessory complex" evidence=ISS]
            [GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
            transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
            phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
            polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
            mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
            evidence=TAS] [GO:0002474 "antigen processing and presentation of
            peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
            processing and presentation of exogenous peptide antigen via MHC
            class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
            evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
            "regulation of cellular amino acid metabolic process" evidence=TAS]
            [GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
            damage response, signal transduction by p53 class mediator
            resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
            expression" evidence=TAS] [GO:0016032 "viral reproduction"
            evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
            [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
            "anaphase-promoting complex-dependent proteasomal
            ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0034641 "cellular nitrogen compound metabolic process"
            evidence=TAS] [GO:0042590 "antigen processing and presentation of
            exogenous peptide antigen via MHC class I" evidence=TAS]
            [GO:0042981 "regulation of apoptotic process" evidence=TAS]
            [GO:0044281 "small molecule metabolic process" evidence=TAS]
            [GO:0051436 "negative regulation of ubiquitin-protein ligase
            activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
            "positive regulation of ubiquitin-protein ligase activity involved
            in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
            ubiquitin-protein ligase activity involved in mitotic cell cycle"
            evidence=TAS] [GO:0010950 "positive regulation of endopeptidase
            activity" evidence=IMP] Reactome:REACT_13505 Reactome:REACT_578
            Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
            Reactome:REACT_111217 InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
            GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
            Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
            Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
            Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0044281
            GO:GO:0046872 GO:GO:0000082 GO:GO:0008237 EMBL:CH471058
            GO:GO:0051436 GO:GO:0000724 GO:GO:0061133 GO:GO:0070628
            GO:GO:0008541 GO:GO:0000216 GO:GO:0000209 eggNOG:COG1310
            GO:GO:0070536 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
            GO:GO:0006303 MEROPS:M67.001 GO:GO:0004221 GO:GO:0006521
            GO:GO:0061136 Reactome:REACT_383 InterPro:IPR024969 Pfam:PF13012
            HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP EMBL:U86782
            EMBL:AK055128 EMBL:BC066336 IPI:IPI00024821 RefSeq:NP_005796.1
            UniGene:Hs.740477 ProteinModelPortal:O00487 SMR:O00487
            IntAct:O00487 STRING:O00487 PhosphoSite:O00487 OGP:O00487
            REPRODUCTION-2DPAGE:IPI00024821 PaxDb:O00487 PeptideAtlas:O00487
            PRIDE:O00487 Ensembl:ENST00000409682 GeneID:10213 KEGG:hsa:10213
            UCSC:uc002ubu.2 CTD:10213 GeneCards:GC02P162164 HGNC:HGNC:16889
            HPA:HPA002114 MIM:607173 neXtProt:NX_O00487 PharmGKB:PA134957776
            HOVERGEN:HBG053742 InParanoid:O00487 OrthoDB:EOG4R23V7
            BindingDB:O00487 ChEMBL:CHEMBL2007629 GenomeRNAi:10213
            NextBio:38668 ArrayExpress:O00487 Bgee:O00487 CleanEx:HS_PSMD14
            Genevestigator:O00487 GermOnline:ENSG00000115233 Uniprot:O00487
        Length = 310

 Score = 114 (45.2 bits), Expect = 0.00095, P = 0.00095
 Identities = 37/149 (24%), Positives = 73/149 (48%)

Query:   326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 384
             A D +E  Q++IS+  +   +K  ++     +E  G++ G  + +    +  +    Q  
Sbjct:    24 AVDTAE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVIDVFAMPQSG 79

Query:   385 TSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPE 439
             T  S +A +   + ++ ++  Q  R    +GW H+HP   C++S +D++T  S++ +   
Sbjct:    80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 139

Query:   440 SVAIVMAP-QDATRKHGI--FRLTSPGGM 465
             +VA+V+ P Q    K  I  FRL +   M
Sbjct:   140 AVAVVVDPIQSVKGKVVIDAFRLINANMM 168


>UNIPROTKB|F1RPQ3 [details] [associations]
            symbol:PSMD14 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0070628 "proteasome binding" evidence=IEA] [GO:0061136
            "regulation of proteasomal protein catabolic process" evidence=IEA]
            [GO:0061133 "endopeptidase activator activity" evidence=IEA]
            [GO:0008541 "proteasome regulatory particle, lid subcomplex"
            evidence=IEA] [GO:0006303 "double-strand break repair via
            nonhomologous end joining" evidence=IEA] [GO:0000724 "double-strand
            break repair via homologous recombination" evidence=IEA]
            InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0061133
            GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
            GeneTree:ENSGT00550000074674 OMA:MVLGQEP EMBL:CU571357
            Ensembl:ENSSSCT00000017304 Uniprot:F1RPQ3
        Length = 310

 Score = 114 (45.2 bits), Expect = 0.00095, P = 0.00095
 Identities = 37/149 (24%), Positives = 73/149 (48%)

Query:   326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 384
             A D +E  Q++IS+  +   +K  ++     +E  G++ G  + +    +  +    Q  
Sbjct:    24 AVDTAE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVIDVFAMPQSG 79

Query:   385 TSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPE 439
             T  S +A +   + ++ ++  Q  R    +GW H+HP   C++S +D++T  S++ +   
Sbjct:    80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 139

Query:   440 SVAIVMAP-QDATRKHGI--FRLTSPGGM 465
             +VA+V+ P Q    K  I  FRL +   M
Sbjct:   140 AVAVVVDPIQSVKGKVVIDAFRLINANMM 168


>MGI|MGI:1913284 [details] [associations]
            symbol:Psmd14 "proteasome (prosome, macropain) 26S subunit,
            non-ATPase, 14" species:10090 "Mus musculus" [GO:0000502
            "proteasome complex" evidence=ISS] [GO:0000724 "double-strand break
            repair via homologous recombination" evidence=ISO] [GO:0004175
            "endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISO] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006303 "double-strand break repair via
            nonhomologous end joining" evidence=ISO] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
            evidence=IEA] [GO:0008152 "metabolic process" evidence=ISS]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
            "metallopeptidase activity" evidence=IEA] [GO:0008541 "proteasome
            regulatory particle, lid subcomplex" evidence=ISO] [GO:0010950
            "positive regulation of endopeptidase activity" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0022624
            "proteasome accessory complex" evidence=IDA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0061133 "endopeptidase activator
            activity" evidence=ISO] [GO:0061136 "regulation of proteasomal
            protein catabolic process" evidence=ISO] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=ISO] [GO:0070628 "proteasome
            binding" evidence=ISO] InterPro:IPR000555 Pfam:PF01398
            SMART:SM00232 MGI:MGI:1913284 GO:GO:0046872 GO:GO:0006508
            GO:GO:0008237 GO:GO:0004175 GO:GO:0000724 GO:GO:0061133
            GO:GO:0008541 eggNOG:COG1310 GO:GO:0070536 GO:GO:0006303
            MEROPS:M67.001 GO:GO:0004221 GO:GO:0061136 InterPro:IPR024969
            Pfam:PF13012 GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690
            KO:K03030 OMA:MVLGQEP CTD:10213 HOVERGEN:HBG053742
            OrthoDB:EOG4R23V7 EMBL:Y13071 EMBL:AK012013 EMBL:AK151104
            EMBL:AK151733 EMBL:BC003742 IPI:IPI00113262 RefSeq:NP_067501.2
            UniGene:Mm.218198 ProteinModelPortal:O35593 SMR:O35593
            IntAct:O35593 MINT:MINT-4049993 STRING:O35593 PhosphoSite:O35593
            REPRODUCTION-2DPAGE:O35593 PaxDb:O35593 PRIDE:O35593
            Ensembl:ENSMUST00000028278 GeneID:59029 KEGG:mmu:59029
            InParanoid:O35593 BindingDB:O35593 ChiTaRS:PSMD14 NextBio:314614
            Bgee:O35593 Genevestigator:O35593 GermOnline:ENSMUSG00000026914
            Uniprot:O35593
        Length = 310

 Score = 114 (45.2 bits), Expect = 0.00095, P = 0.00095
 Identities = 37/149 (24%), Positives = 73/149 (48%)

Query:   326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 384
             A D +E  Q++IS+  +   +K  ++     +E  G++ G  + +    +  +    Q  
Sbjct:    24 AVDTAE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVIDVFAMPQSG 79

Query:   385 TSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPE 439
             T  S +A +   + ++ ++  Q  R    +GW H+HP   C++S +D++T  S++ +   
Sbjct:    80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 139

Query:   440 SVAIVMAP-QDATRKHGI--FRLTSPGGM 465
             +VA+V+ P Q    K  I  FRL +   M
Sbjct:   140 AVAVVVDPIQSVKGKVVIDAFRLINANMM 168


>RGD|1594532 [details] [associations]
            symbol:Psmd14 "proteasome (prosome, macropain) 26S subunit,
            non-ATPase, 14" species:10116 "Rattus norvegicus" [GO:0000724
            "double-strand break repair via homologous recombination"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0006303 "double-strand break repair via
            nonhomologous end joining" evidence=ISO] [GO:0008541 "proteasome
            regulatory particle, lid subcomplex" evidence=ISO] [GO:0010950
            "positive regulation of endopeptidase activity" evidence=ISO]
            [GO:0022624 "proteasome accessory complex" evidence=ISO]
            [GO:0061133 "endopeptidase activator activity" evidence=ISO]
            [GO:0061136 "regulation of proteasomal protein catabolic process"
            evidence=ISO] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISO] [GO:0070628 "proteasome binding" evidence=ISO]
            InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1594532
            GO:GO:0000502 GO:GO:0061133 eggNOG:COG1310 MEROPS:M67.001
            EMBL:CH473949 GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
            HOGENOM:HOG000183690 KO:K03030 CTD:10213 HOVERGEN:HBG053742
            OrthoDB:EOG4R23V7 IPI:IPI00372125 EMBL:BC097427 EMBL:BC158645
            RefSeq:NP_001020860.1 UniGene:Rn.161794 SMR:Q4V8E2 IntAct:Q4V8E2
            STRING:Q4V8E2 GeneID:311078 KEGG:rno:311078 UCSC:RGD:1594532
            InParanoid:Q4V8E2 NextBio:662956 Genevestigator:Q4V8E2
            Uniprot:Q4V8E2
        Length = 310

 Score = 114 (45.2 bits), Expect = 0.00095, P = 0.00095
 Identities = 37/149 (24%), Positives = 73/149 (48%)

Query:   326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 384
             A D +E  Q++IS+  +   +K  ++     +E  G++ G  + +    +  +    Q  
Sbjct:    24 AVDTAE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVIDVFAMPQSG 79

Query:   385 TSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPE 439
             T  S +A +   + ++ ++  Q  R    +GW H+HP   C++S +D++T  S++ +   
Sbjct:    80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 139

Query:   440 SVAIVMAP-QDATRKHGI--FRLTSPGGM 465
             +VA+V+ P Q    K  I  FRL +   M
Sbjct:   140 AVAVVVDPIQSVKGKVVIDAFRLINANMM 168


>ZFIN|ZDB-GENE-070410-56 [details] [associations]
            symbol:psmd14 "proteasome (prosome, macropain) 26S
            subunit, non-ATPase, 14" species:7955 "Danio rerio" [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR000555 Pfam:PF01398
            SMART:SM00232 ZFIN:ZDB-GENE-070410-56 InterPro:IPR024969
            Pfam:PF13012 GeneTree:ENSGT00550000074674 OMA:MVLGQEP EMBL:CR450841
            IPI:IPI00800873 PRIDE:F1QHE5 Ensembl:ENSDART00000091901 Bgee:F1QHE5
            Uniprot:F1QHE5
        Length = 310

 Score = 114 (45.2 bits), Expect = 0.00095, P = 0.00095
 Identities = 37/149 (24%), Positives = 73/149 (48%)

Query:   326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 384
             A D +E  Q++IS+  +   +K  ++     +E  G++ G  + +    +  +    Q  
Sbjct:    24 AVDTAE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVIDVFAMPQSG 79

Query:   385 TSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPE 439
             T  S +A +   + ++ ++  Q  R    +GW H+HP   C++S +D++T  S++ +   
Sbjct:    80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 139

Query:   440 SVAIVMAP-QDATRKHGI--FRLTSPGGM 465
             +VA+V+ P Q    K  I  FRL +   M
Sbjct:   140 AVAVVVDPIQSVKGKVVIDAFRLINANMM 168


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.130   0.375    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      509       489   0.00082  119 3  11 22  0.42    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  40
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  279 KB (2147 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  50.17u 0.12s 50.29t   Elapsed:  00:00:02
  Total cpu time:  50.17u 0.12s 50.29t   Elapsed:  00:00:02
  Start:  Fri May 10 07:51:31 2013   End:  Fri May 10 07:51:33 2013

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