BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010474
(509 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYB5|AMSH1_ARATH AMSH-like ubiquitin thioesterase 1 OS=Arabidopsis thaliana GN=AMSH1
PE=2 SV=1
Length = 507
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/510 (65%), Positives = 395/510 (77%), Gaps = 4/510 (0%)
Query: 1 MRSSSEGINIAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSS 60
M SS E I+IA SA+R+ VDNRI+L++Y+RIADNILKQA+IFR EKN+IDLYVMLLRFSS
Sbjct: 1 MGSSFETIDIATSARRIGVDNRISLKFYFRIADNILKQANIFRAEKNVIDLYVMLLRFSS 60
Query: 61 LVTETIPCHRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWS 120
L ETIP HRDY S KS K YL+ +LL+ L+ELE+L+P VQQ+I+EL K + +
Sbjct: 61 LALETIPSHRDYRTSLKSNKEYLRMRLLDVLTELEKLKPVVQQRIDELYPKLKPRYNVQA 120
Query: 121 HASQNSTLEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLN 180
H + N +L W S K + +YD K P Y GS QQ P++E+FR+MS+N
Sbjct: 121 HPA-NGSLGWSSAVKPSFNSYDHAKVRNPPGHNSGYMGSRGQQFLNAAPLEERFRKMSVN 179
Query: 181 FPRPNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIK 240
F RPN ETLS+HS+LGP GL WQPPK D V+YP+NID +P+ IPS +Q +S I
Sbjct: 180 F-RPNEETLSKHSILGPGGLSAQWQPPKYDTKVQYPSNIDFSPVVIPSFQQLVDSKPMI- 237
Query: 241 TDSSNVEPEKSSVQSISTPNDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTE 300
T+ SN EPEK V+ N++I+ + TEE SMISFE E+ N ++IRQPSPPPVL E
Sbjct: 238 TNGSNDEPEKPIVEPSVASNEKIQKNYTEELSSMISFEEPESVNENNLIRQPSPPPVLAE 297
Query: 301 VQDLIAAMSPQVTETECQVGNSLSDAFDRSE-PLQLHISTTMMDNFMKLAKSNTDKNLET 359
VQDL+ A+ P+V E EC + NSL D RSE PL+LHI+T+MMD FM+LAKSNT KNLET
Sbjct: 298 VQDLVPALCPEVREPECMIENSLPDESLRSESPLELHIATSMMDTFMRLAKSNTKKNLET 357
Query: 360 CGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQS 419
CGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDK+SLFPLGWIHTHPTQS
Sbjct: 358 CGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKQSLFPLGWIHTHPTQS 417
Query: 420 CFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGFHPH 479
CFMSSIDVHTHYSYQIMLPE+VAIVMAPQD++R HGIFRLT+PGGM+VIR C +RGFH H
Sbjct: 418 CFMSSIDVHTHYSYQIMLPEAVAIVMAPQDSSRNHGIFRLTTPGGMTVIRNCDRRGFHAH 477
Query: 480 DPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 509
P DGGPIY C +VYMNPNLKFDVIDLR
Sbjct: 478 SSPEDGGPIYNTCKEVYMNPNLKFDVIDLR 507
>sp|Q5PNU3|AMSH3_ARATH AMSH-like ubiquitin thioesterase 3 OS=Arabidopsis thaliana GN=AMSH3
PE=1 SV=2
Length = 507
Score = 474 bits (1220), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/510 (48%), Positives = 337/510 (66%), Gaps = 13/510 (2%)
Query: 8 INIAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIP 67
I++ A+ ++VDNRI LR YYRIADN+L+QA I+REEKN++DLY+MLLR+SSL++ETIP
Sbjct: 3 IDLNKVAREIEVDNRIPLRNYYRIADNLLRQASIYREEKNVVDLYIMLLRYSSLISETIP 62
Query: 68 CHRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWSH----AS 123
HRDY AS ++L +K+L ++ELE L+P Q +++LNR + S +
Sbjct: 63 FHRDYQASLPQERLGSRKRLRAVINELESLKPEFNQLVDKLNRVEDESRQDGSDLPVVSY 122
Query: 124 QNSTLEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLNFPR 183
+ +EWP K + + D+ K L Y ++ T+ +D+QF+++S +F
Sbjct: 123 SSDAVEWPPAHKASYSRPDINKPLPTSQPSWTYNNNLTSSSNRTQ-IDQQFQKLSFDFLP 181
Query: 184 PNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQ--PSESSIKIKT 241
PN TLSRHS LGPNGL PKS+ V+YP+N D + L + PS SS +
Sbjct: 182 PNQATLSRHSFLGPNGLKRQMVAPKSEIKVQYPSNTDWGSADNSGLIEAGPSSSSASLNG 241
Query: 242 DSSNVEPEKSSVQSISTPNDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEV 301
DS V S++ S+ + +D +E S + +E P ++QPSPPPVL +V
Sbjct: 242 DSQEV----STLNSVLSLDDGRWQRHSEAVNSQFISDATEDPFQFVGMKQPSPPPVLAQV 297
Query: 302 QDLIAAMSP-QVTETECQVGNSLSDAFDRSEPLQ-LHISTTMMDNFMKLAKSNTDKNLET 359
+A + P +V + + + S Q LH+ +MD+F++LA+SNT++NLET
Sbjct: 298 HQELAQICPSKVADPRPGPAIPSLEGKEGSNSYQHLHVPVRIMDDFLRLARSNTERNLET 357
Query: 360 CGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQS 419
CG+LAGSLKNR F+IT LIIPKQESTSDSCQ NEEEIFEVQD+ SLFPLGWIHTHPTQ+
Sbjct: 358 CGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIHTHPTQT 417
Query: 420 CFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGFHPH 479
CFMSS+D+HTHYSYQIMLPE+VAIVMAP D + HGIF L+ P G+SVIR CQQRGFHPH
Sbjct: 418 CFMSSVDLHTHYSYQIMLPEAVAIVMAPTDESTPHGIFHLSDPSGVSVIRNCQQRGFHPH 477
Query: 480 DPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 509
+ DG PIY+ C+ V++N LK++V+DLR
Sbjct: 478 EESEDGNPIYEHCSHVFLNAKLKYEVLDLR 507
>sp|Q6NKP9|AMSH2_ARATH AMSH-like ubiquitin thioesterase 2 OS=Arabidopsis thaliana GN=AMSH2
PE=2 SV=1
Length = 223
Score = 256 bits (654), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 143/175 (81%)
Query: 335 LHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNE 394
+HIS ++++F +LA+ NT+K+LETCG LA L+ FY+T LIIPKQESTS+SCQA NE
Sbjct: 49 VHISERLLEDFTELARENTEKDLETCGTLAAFLERGIFYVTTLIIPKQESTSNSCQAMNE 108
Query: 395 EEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH 454
E+F +Q++R L+P+GWIHTHP+Q CFMSS+D+HTHYSYQ+M+PE+ AIV+AP D+++ +
Sbjct: 109 VEVFSIQNERELYPVGWIHTHPSQGCFMSSVDLHTHYSYQVMVPEAFAIVVAPTDSSKSY 168
Query: 455 GIFRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 509
GIF+LT PGGM V+R C + GFHPH P DG P+Y+ C++VY N NL+F++ DLR
Sbjct: 169 GIFKLTDPGGMEVLRGCSETGFHPHKEPEDGNPVYEHCSNVYKNSNLRFEIFDLR 223
>sp|Q9P371|SST2_SCHPO AMSH-like protease sst2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=sst2 PE=1 SV=1
Length = 435
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 161/514 (31%), Positives = 238/514 (46%), Gaps = 110/514 (21%)
Query: 10 IAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPC- 68
IA+ A D + I L+ + R + I KQA ++ E + + +L R+ L + C
Sbjct: 16 IASRAGAFDFNKNIPLKNWLRTSTTISKQAHVYVSEHDYSNGVFLLFRYCELFMK---CQ 72
Query: 69 -HRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWSHASQNST 127
H D A++K + + + NAL E+E ++P V+++ + +K
Sbjct: 73 KHPD-AAAYKKELFDYYQGVRNALEEIELIKPIVKEQYEQYQCQKN-------------- 117
Query: 128 LEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYT-RPVDEQFRRMSLNFPRPNA 186
+ LKK ++ + Q S+ + ++Y P+ EQ+ L P
Sbjct: 118 -DLDDLKKLSMKDS---------------QPSLEKPVSYVDEPILEQWALSDLQILPP-- 159
Query: 187 ETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIKTDSSNV 246
S LL P+ S KL K ++ DL + PSL + + SS
Sbjct: 160 ---SSTDLLSPD----------SQKLSK--SSSDLPQFDYPSLNSSPTFNSNLPISSSRF 204
Query: 247 EPEKSSVQSISTP---NDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLT-EVQ 302
E S + +P +D +I ++P I TSE P P P T ++
Sbjct: 205 EKTSLSDSKLVSPEPLDDNKDIQFIKKP---IYTRTSE----------PRPKPAGTFKIH 251
Query: 303 DLIAAMSPQVTETECQVGNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGI 362
P T +++ + F+ + K NT KNLETCGI
Sbjct: 252 AYTEGGKPLRT---------------------IYLPKLLKKVFLDVVKPNTKKNLETCGI 290
Query: 363 LAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFM 422
L G L+ F+IT L+IP QE+TSD+C T+E +FE QDK +L LGWIHTHPTQ+CFM
Sbjct: 291 LCGKLRQNAFFITHLVIPLQEATSDTCGTTDEASLFEFQDKHNLLTLGWIHTHPTQTCFM 350
Query: 423 SSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRG-FHPHDP 481
SS+D+HTH SYQ+MLPE++AIVMAP T GIFRL P G+ I +C++ G FHPH+
Sbjct: 351 SSVDLHTHCSYQLMLPEAIAIVMAPSKNTS--GIFRLLDPEGLQTIVKCRKPGLFHPHE- 407
Query: 482 PPDGGPIYKPCTDVYMNP------NLKFDVIDLR 509
G +Y + P N K V+DLR
Sbjct: 408 ----GKVYT----MVAQPGHVREINSKLQVVDLR 433
>sp|Q54Q40|D1039_DICDI Probable ubiquitin thioesterase DG1039 OS=Dictyostelium discoideum
GN=DG1039 PE=3 SV=1
Length = 715
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 133/207 (64%), Gaps = 5/207 (2%)
Query: 306 AAMSPQVTETECQVGNSLSDAFDRSEPL-QLHISTTMMDNFMKLAKSNTDKNLETCGILA 364
A +P +T T + S+A + L ++ + + FM+LA++NT +++ETCGIL+
Sbjct: 507 AVNTPSITPTTNKPNIDSSEASKKYSKLRKIIVHGEVFQEFMRLAENNTKRSIETCGILS 566
Query: 365 GSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSS 424
G+L N F IT +IIPKQE T+D+C E EIFE Q + L LGWIHTHPTQ CF+S+
Sbjct: 567 GTLSNDVFRITTIIIPKQEGTTDTCNTIEEHEIFEYQLENDLLTLGWIHTHPTQDCFLSA 626
Query: 425 IDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGFHPHDPPPD 484
+DVHTH SYQ +L E++A+V++P A GIFRLT P G+ +++C+ + FHPH PP +
Sbjct: 627 VDVHTHCSYQYLLQEAIAVVISPM-ANPNFGIFRLTDPPGLETVQKCKLKSFHPH-PPVN 684
Query: 485 GGPIYKPCTDVYMNPNLKFD--VIDLR 509
G PIY V + K D V+DLR
Sbjct: 685 GIPIYTKVDHVDLIWGKKSDSKVVDLR 711
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 10 IAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCH 69
+ + ++VD ++ +Y +N++KQADI++ E +I Y+ LRF L+ E + H
Sbjct: 17 VKKHVEGVEVDKNYSIFHYLSTCNNLVKQADIYKSEGDIERTYIYSLRFCILIFEKLQKH 76
Query: 70 RDY-LASFKSQKLYLKKKLLNALSELEELQPAVQQ 103
D+ SF + +K+K L ELE L+ +++
Sbjct: 77 PDFNKESFTKSRNEIKRKAELKLKELEGLKETLKK 111
>sp|Q96FJ0|STALP_HUMAN AMSH-like protease OS=Homo sapiens GN=STAMBPL1 PE=1 SV=2
Length = 436
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 145/506 (28%), Positives = 232/506 (45%), Gaps = 103/506 (20%)
Query: 4 SSEGINIAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVT 63
S G NI S I R Y+R + + A ++ EE N+ + +V+ +F +L
Sbjct: 34 SKLGCNITISED-------ITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFV 86
Query: 64 ETIPCHRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWSHAS 123
E +P HRDY +K + KKL E+ +T++
Sbjct: 87 EKLPNHRDYQQCAVPEKQDIMKKL------------------KEIAFPRTDE-------- 120
Query: 124 QNSTLEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLNFPR 183
LK L Y+V L S+ Y+ I ++L + R ++ + +R++
Sbjct: 121 ---------LKNDLLKKYNVEYQEYLQSKN-KYKAEILKKLEHQRLIEAERKRIA----- 165
Query: 184 PNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIKTDS 243
Q +S++ + + + + + +R S + + D
Sbjct: 166 -----------------QMRQQQLESEQFLFFEDQLKKQELARGQMRSQQTSGLSEQIDG 208
Query: 244 SNVEPEKSSVQSISTPNDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEVQD 303
S + S S N + + ++P S T+ A +S V R +P L+ VQ+
Sbjct: 209 SAL-----SCFSTHQNNSLLNVF-ADQPNK--SDATNYASHSPPVNRALTPAATLSAVQN 260
Query: 304 LIAAMSPQVTETECQVGNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGIL 363
L+ V C V + + F++LA+SNT + +ETCGIL
Sbjct: 261 LV------VEGLRCVV-----------------LPEDLCHKFLQLAESNTVRGIETCGIL 297
Query: 364 AGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMS 423
G L + +F IT +I+PKQ + D C N EE+F VQD+ L LGWIHTHPTQ+ F+S
Sbjct: 298 CGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLS 357
Query: 424 SIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGGMSVIRQCQQRGFHPHDPPP 483
S+D+HTH SYQ+MLPE++AIV +P+ + GIFRLT+ GM + C+++GFHPH P
Sbjct: 358 SVDLHTHCSYQLMLPEAIAIVCSPKH--KDTGIFRLTN-AGMLEVSACKKKGFHPHTKEP 414
Query: 484 DGGPIYKPCTDVYMNPNLKFDVIDLR 509
++ C V + ++K V+DLR
Sbjct: 415 R---LFSICKHVLVK-DIKIIVLDLR 436
>sp|Q5R558|STALP_PONAB AMSH-like protease OS=Pongo abelii GN=STAMBPL1 PE=2 SV=1
Length = 436
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 228/484 (47%), Gaps = 96/484 (19%)
Query: 26 RYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASFKSQKLYLKK 85
R Y+R + + A ++ EE N+ + +V+ +F +L E +P HRDY
Sbjct: 49 RRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQC---------- 98
Query: 86 KLLNALSELEELQPAVQQKINELNRKKTNQVTGWSHASQNSTLEWPSLKKQTLTNYDVTK 145
A+ E ++ + +K+ E+ +T++ LK L Y+V
Sbjct: 99 ----AVPEKQD----IMKKLKEIAFPRTDE-----------------LKNDLLKKYNVEY 133
Query: 146 ALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLNFPRPNAETLSRHSLLGPNGLYGHWQ 205
L S+ Y+ I ++L + R ++ + +R++ Q
Sbjct: 134 QEYLQSKN-QYKAEILKKLEHQRLIEAERKRIA----------------------QMRQQ 170
Query: 206 PPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIKTDSSNVEPEKSSVQSISTPNDEIEI 265
+S++ + + + + + +R S + + D S + S S N + +
Sbjct: 171 QLESEQFLFFEDQLKKQELARGQMRSQQTSGLSEQIDGSAL-----SCFSTHQNNSLLNV 225
Query: 266 HRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEVQDLIAAMSPQVTETECQVGNSLSD 325
++P S T+ A +S V R +P L+ VQ+L+ V C V
Sbjct: 226 F-ADQPNK--SDATNYASHSPPVNRALTPAATLSAVQNLV------VEGLRCVV------ 270
Query: 326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQEST 385
+ + F++LA+SNT + +ETCGIL G L + +F IT +I+PKQ +
Sbjct: 271 -----------LPKDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQSAG 319
Query: 386 SDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVM 445
D C N EE+F VQD+ L LGWIHTHPTQ+ F+SS+D+HTH SYQ+ML E++AIV
Sbjct: 320 PDYCDVENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLSEAIAIVC 379
Query: 446 APQDATRKHGIFRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDV 505
+P+ + GIFRLT+ GM + C+++GFHPH P ++ C V + ++K V
Sbjct: 380 SPKH--KDTGIFRLTN-AGMLEVSACKKKGFHPHTKEPR---LFSICKHVLVK-DIKIIV 432
Query: 506 IDLR 509
+DLR
Sbjct: 433 LDLR 436
>sp|Q76N33|STALP_MOUSE AMSH-like protease OS=Mus musculus GN=Stambpl1 PE=2 SV=1
Length = 436
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 116/173 (67%), Gaps = 7/173 (4%)
Query: 337 ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEE 396
+S + F+ LA SNT + +ETCGIL G L + +F IT +++PKQ + D C N EE
Sbjct: 271 LSRDLCHKFLLLADSNTVRGIETCGILCGKLTHNEFTITHVVVPKQSAGPDYCDVENVEE 330
Query: 397 IFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGI 456
+F VQD+ L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPE++AIV +P+ + GI
Sbjct: 331 LFNVQDQHGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKH--KDTGI 388
Query: 457 FRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 509
FRLT+ GM + C+++GFHPH P ++ C+ V + ++K V+DLR
Sbjct: 389 FRLTN-AGMLEVSTCKKKGFHPHTKDP---KLFSICSHVLVK-DIKTTVLDLR 436
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASF 76
+ ++ I R Y+R + + A ++ EE N+ + +V+ +F +L E +P HRDY
Sbjct: 40 ISINEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPSHRDYQQCA 99
Query: 77 KSQKLYLKKKLLN-ALSELEELQPAVQQKIN 106
+K + KKL A +EL+ + +K N
Sbjct: 100 VPEKQDIMKKLKEIAFPRTDELKTDLLRKYN 130
>sp|O95630|STABP_HUMAN STAM-binding protein OS=Homo sapiens GN=STAMBP PE=1 SV=1
Length = 424
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 107/151 (70%), Gaps = 6/151 (3%)
Query: 345 FMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKR 404
F++LA +NT + +ETCGIL G L +F IT ++IPKQ + SD C NEEE+F +QD++
Sbjct: 267 FLQLASANTARGVETCGILCGKLMRNEFTITHVLIPKQSAGSDYCNTENEEELFLIQDQQ 326
Query: 405 SLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPGG 464
L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPESVAIV +P+ ++ G F+LT G
Sbjct: 327 GLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSPK--FQETGFFKLTD-HG 383
Query: 465 MSVIRQCQQRGFHPHDPPPDGGPIYKPCTDV 495
+ I C+Q+GFHPH P P++ C+ V
Sbjct: 384 LEEISSCRQKGFHPHSKDP---PLFCSCSHV 411
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASF 76
++V+ I R Y+R I++ A I+ EE NI +++ ++ +L E +P HRDY
Sbjct: 25 VEVNEDIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRDY---- 80
Query: 77 KSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWS 120
KS + KK + L E+ P ++ EL ++ T + T ++
Sbjct: 81 KSAVIPEKKDTVKKLKEIA--FPKAEELKAELLKRYTKEYTEYN 122
>sp|Q6TH47|STBPA_DANRE STAM-binding protein-like A OS=Danio rerio GN=stambpa PE=2 SV=3
Length = 418
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 103/151 (68%), Gaps = 5/151 (3%)
Query: 334 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATN 393
QL + + F+KLA++NT + +ETCGIL G L F +T +I+PKQ D C N
Sbjct: 250 QLFVPAELCQRFLKLAETNTARAVETCGILCGKLMKNAFTVTHVIVPKQCGGPDYCDTEN 309
Query: 394 EEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRK 453
EEE+F +QD+ L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+ +
Sbjct: 310 EEELFLIQDQNDLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FNE 367
Query: 454 HGIFRLTSPGGMSVIRQCQQRGFHPH--DPP 482
G FRLT GM + C+QRGFHPH DPP
Sbjct: 368 TGYFRLTD-YGMDDVGTCKQRGFHPHPKDPP 397
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDY-LAS 75
+DV + R Y+R I++ A+I+ +E N+ +++ ++ +L E +P HR+Y A+
Sbjct: 25 VDVSEDVPPRRYFRSGMEIIRMANIYADEGNVEHAFILYNKYITLFIEKLPKHREYKTAN 84
Query: 76 FKSQKLYLKKKLLNALSELEELQ 98
+K ++K A + EEL+
Sbjct: 85 IPEKKETMRKLKEIAFPKAEELK 107
>sp|Q8R424|STABP_RAT STAM-binding protein OS=Rattus norvegicus GN=Stambp PE=2 SV=1
Length = 424
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 7/169 (4%)
Query: 341 MMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEV 400
+ F++LA +NT K +ETCG+L G L +F IT ++IP+Q D C NEEEIF +
Sbjct: 263 LCSEFLQLASANTAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEEIFFM 322
Query: 401 QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLT 460
QD L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+ ++ G F+LT
Sbjct: 323 QDDLGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FQETGFFKLT 380
Query: 461 SPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 509
G+ I C+Q+GFHPH P P++ C+ V + + + DLR
Sbjct: 381 D-YGLQEISTCRQKGFHPHGRDP---PLFCDCSHVTVKDRI-VTITDLR 424
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASF 76
++++ I R Y+R I++ A I+ EE NI +++ ++ +L E +P HRDY ++
Sbjct: 25 VELNEDIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRDYKSAI 84
Query: 77 KSQKLYLKKKLLN-ALSELEELQ 98
+K KKL N A + EEL+
Sbjct: 85 IPEKKDAVKKLKNVAFPKAEELK 107
>sp|Q9CQ26|STABP_MOUSE STAM-binding protein OS=Mus musculus GN=Stambp PE=2 SV=1
Length = 424
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 7/169 (4%)
Query: 341 MMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEV 400
+ F++LA +NT K +ETCG+L G L +F IT ++IP+Q D C NEEEIF +
Sbjct: 263 LCSEFLQLASANTAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEEIFFM 322
Query: 401 QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLT 460
QD L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+ ++ G F+LT
Sbjct: 323 QDDLGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FQETGFFKLT 380
Query: 461 SPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPCTDVYMNPNLKFDVIDLR 509
G+ I C+Q+GFHPH P P++ C+ V + + + DLR
Sbjct: 381 D-YGLQEISTCRQKGFHPHGRDP---PLFCDCSHVTVKDRI-VTITDLR 424
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASF 76
++++ I R YYR I++ A ++ EE NI +++ ++ +L E +P HRDY ++
Sbjct: 25 VELNEDIPPRRYYRSGVEIIRMASVYSEEGNIEHAFILYNKYITLFIEKLPKHRDYKSAI 84
Query: 77 KSQKLYLKKKLLN-ALSELEELQPAVQQKINELNRKKTNQ 115
+K KKL + A + EEL+ EL R+ T +
Sbjct: 85 IPEKKDAVKKLKSVAFPKAEELK-------TELLRRYTKE 117
>sp|Q63ZM7|STABP_XENLA STAM-binding protein-like OS=Xenopus laevis GN=stambp PE=2 SV=1
Length = 416
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 103/141 (73%), Gaps = 5/141 (3%)
Query: 344 NFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDK 403
F++L+++NT + +ETCGIL G L +F +T +I+PKQ D C +EEE+F +QD+
Sbjct: 258 KFLQLSENNTQRGVETCGILCGKLLQNEFTVTHVIVPKQSGGPDYCNTESEEELFLIQDQ 317
Query: 404 RSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGIFRLTSPG 463
+ L LGWIHTHPTQ+ F+SS+D+HTH SYQ+MLPES+AIV +P+ ++ G F+LT
Sbjct: 318 QGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPK--FQETGFFKLTD-Y 374
Query: 464 GMSVIRQCQQRGFHPH--DPP 482
GM I +C+Q+GFHPH +PP
Sbjct: 375 GMKEIGECRQKGFHPHCKEPP 395
Score = 40.4 bits (93), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 35/56 (62%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDY 72
++V++ I + YYR +++ A+++ E +I + +++ ++ +L E +P HRDY
Sbjct: 25 VEVNDDIPPKRYYRSGVELIRMANVYSGEGSIENAFILYNKYITLFIEKLPKHRDY 80
>sp|Q86IJ1|PSDE_DICDI 26S proteasome non-ATPase regulatory subunit 14 OS=Dictyostelium
discoideum GN=psmD14 PE=3 SV=1
Length = 306
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 319 VGNSLSDAF---DRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKF--Y 373
+G ++DA D +E + HIS+ + ++ A++ LE G++ G L +
Sbjct: 14 LGEKITDATPLPDTAETI--HISSLALLKMLQHARAGVP--LEVMGLMLGELIDEYTIRV 69
Query: 374 ITALIIPKQESTSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVH 428
I +P Q TS S +A + + ++ ++ Q R +GW H+HP C++SS+DV+
Sbjct: 70 IDVFAMP-QSGTSVSVEAIDPVFQTKMLDMLKQTGRDEIVIGWYHSHPGFGCWLSSVDVN 128
Query: 429 THYSYQIMLPESVAIVMAPQDATRKHGI---FRLTSPGGMSVIRQCQQRGFHPHDP 481
T S++ + +VA+V+ P + R + FR + RQ H DP
Sbjct: 129 TQQSFEQLQSRAVAVVVDPLQSVRGKVVIDAFRTIKTSPTAEPRQITSNLGHLQDP 184
>sp|Q750E9|RPN11_ASHGO 26S proteasome regulatory subunit RPN11 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=RPN11 PE=3 SV=1
Length = 311
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 20/146 (13%)
Query: 357 LETCGILAGSLKNR-KFYITALIIPKQESTSDSCQATNEEEIFEV-------QDKRSLFP 408
+E G++ G + + + Q T S +A +++F+ Q R
Sbjct: 52 MEVMGLMLGDFVDEYTVNVVDVFAMPQSGTGVSVEAV--DDVFQAKMMDMLKQTGRDQMV 109
Query: 409 LGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGI---FRLTSPGGM 465
+GW H+HP C++SS+DV T S++ + +VA+V+ P + + + FRL SP
Sbjct: 110 VGWYHSHPGFGCWLSSVDVDTQRSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLISPA-- 167
Query: 466 SVIRQCQQRGFHPHDPPPDGGPIYKP 491
+V+R + P + G + KP
Sbjct: 168 TVVRNQE-----PRQTTSNVGLLNKP 188
>sp|P41878|RPN11_SCHPO 26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rpn11 PE=1 SV=2
Length = 308
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 335 LHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQESTSDSCQATN 393
++IS+ + ++ + T +E G++ G + + + + Q T S +A +
Sbjct: 30 VYISSLALLKMLRHGRHGTP--MEVMGLMLGEFVDDFTVRVVDVFAMPQSGTGVSVEAVD 87
Query: 394 ---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQ 448
++ + ++ Q R +GW H+HP C++SS+D++T S++ + P +VA+V+ P
Sbjct: 88 PVFQKNMMDMLKQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPI 147
Query: 449 DATRKHGI---FRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKP 491
+ + + FRL +P + + G P + G I KP
Sbjct: 148 QSVKGKVVIDAFRLINPSTLMM-------GQEPRQTTSNLGHINKP 186
>sp|P43588|RPN11_YEAST 26S proteasome regulatory subunit RPN11 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPN11 PE=1 SV=1
Length = 306
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 357 LETCGILAGS-LKNRKFYITALIIPKQESTSDSCQATNEEEIFEV-------QDKRSLFP 408
+E G++ G + + + + Q T S +A +++F+ Q R
Sbjct: 47 MEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAV--DDVFQAKMMDMLKQTGRDQMV 104
Query: 409 LGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKHGI---FRLTSPGGM 465
+GW H+HP C++SS+DV+T S++ + +VA+V+ P + + + FRL G +
Sbjct: 105 VGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLIDTGAL 164
>sp|Q6FKS1|RPN11_CANGA 26S proteasome regulatory subunit RPN11 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RPN11 PE=3 SV=1
Length = 306
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 317 CQVGNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNR-KFYIT 375
+VG + ++ D E + +IS+ + +K ++ +E G++ G + +
Sbjct: 11 TKVGAADANKDDTKETV--YISSIALLKMLKHGRAGVP--MEVMGLMLGEFVDEYTVNVV 66
Query: 376 ALIIPKQESTSDSCQATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVH 428
+ Q T S +A +++F+ Q R +GW H+HP C++SS+DV+
Sbjct: 67 DVFAMPQSGTGVSVEAV--DDVFQARMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVN 124
Query: 429 THYSYQIMLPESVAIVMAPQDATRKHGI---FRLTSPGGM 465
T S++ + +VA+V+ P + + + FRL G +
Sbjct: 125 TQKSFEQLNNRAVAVVVDPIQSVKGKVVIDAFRLIDTGAL 164
>sp|Q9V3H2|PSDE_DROME 26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila
melanogaster GN=Rpn11 PE=1 SV=1
Length = 308
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
Query: 334 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQESTSDSCQAT 392
Q++IS+ + +K ++ +E G++ G + + + + Q T S +A
Sbjct: 28 QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAV 85
Query: 393 N---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 447
+ + ++ ++ Q R +GW H+HP C++S +D++T S++ + +VA+V+ P
Sbjct: 86 DPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDP 145
Query: 448 QDATRKHGI---FRLTSPGGMSVIRQ 470
+ + + FRL +P M V+ Q
Sbjct: 146 IQSVKGKVVIDAFRLINP-NMLVLGQ 170
>sp|Q7RXX8|CSN5_NEUCR COP9 signalosome complex subunit 5 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=rri-1 PE=1 SV=1
Length = 336
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 75/183 (40%), Gaps = 16/183 (8%)
Query: 294 PPPVLTEVQDLIAAMSPQVTETECQVGNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSNT 353
P P L +VQ A+ +E V NS D + IS+ M + A+S
Sbjct: 5 PNPGLVDVQR--DALYAYDSEAHKAVVNSRPWTNDHKYFKTVRISSVAMIKMVMHARSG- 61
Query: 354 DKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQ-------DKRSL 406
NLE G++ G ++ IT E T A +E + V+ + R
Sbjct: 62 -GNLEVMGMMQGYIEGSTMVITDAYRLPVEGTETRVNAQDEANEYMVEYLRLCREENRLE 120
Query: 407 FPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH----GIFRLTSP 462
+GW H+HP C++S IDV T Q VA+V+ P ++ G FR T P
Sbjct: 121 NVIGWYHSHPGYGCWLSGIDVGTQSLQQQFNEPFVAVVIDPDRTVSQNKVEIGAFR-TIP 179
Query: 463 GGM 465
G+
Sbjct: 180 EGI 182
>sp|O35593|PSDE_MOUSE 26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus
GN=Psmd14 PE=1 SV=2
Length = 310
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 384
A D +E Q++IS+ + +K ++ +E G++ G + + + + Q
Sbjct: 24 AVDTAE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVIDVFAMPQSG 79
Query: 385 TSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPE 439
T S +A + + ++ ++ Q R +GW H+HP C++S +D++T S++ +
Sbjct: 80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 139
Query: 440 SVAIVMAPQDATRKHGI---FRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKP 491
+VA+V+ P + + + FRL + M + G P + G + KP
Sbjct: 140 AVAVVVDPIQSVKGKVVIDAFRLINANMMVL-------GHEPRQTTSNLGHLNKP 187
>sp|O00487|PSDE_HUMAN 26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens
GN=PSMD14 PE=1 SV=1
Length = 310
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 384
A D +E Q++IS+ + +K ++ +E G++ G + + + + Q
Sbjct: 24 AVDTAE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVIDVFAMPQSG 79
Query: 385 TSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPE 439
T S +A + + ++ ++ Q R +GW H+HP C++S +D++T S++ +
Sbjct: 80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 139
Query: 440 SVAIVMAPQDATRKHGI---FRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKP 491
+VA+V+ P + + + FRL + M + G P + G + KP
Sbjct: 140 AVAVVVDPIQSVKGKVVIDAFRLINANMMVL-------GHEPRQTTSNLGHLNKP 187
>sp|P41883|YPT5_CAEEL Uncharacterized protein F37A4.5 OS=Caenorhabditis elegans
GN=F37A4.5 PE=3 SV=1
Length = 319
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 328 DRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQESTS 386
D SE + +IS+ + ++ A+S LE G++ G + + +T + Q TS
Sbjct: 24 DTSETV--NISSLALLKMLRHARSGIP--LEVMGLMLGDFVDDYTINVTDVFAMPQSGTS 79
Query: 387 ------DSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPES 440
D T ++ ++ R+ +GW H+HP C++SS+DV+T S++ + P +
Sbjct: 80 VTVESVDPVYQTKHMDLLKLVG-RTENVVGWYHSHPGFGCWLSSVDVNTQQSFEALHPRA 138
Query: 441 VAIVMAP 447
VA+V+ P
Sbjct: 139 VAVVVDP 145
>sp|O76577|PSDE_CAEEL 26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis
elegans GN=rpn-11 PE=1 SV=1
Length = 312
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 324 SDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQ 382
S+ D SE + +IS+ + +K ++ +E G++ G + + + + Q
Sbjct: 24 SNQVDTSETV--YISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVNVIDVFAMPQ 79
Query: 383 ESTSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIML 437
T S +A + + ++ ++ Q R +GW H+HP C++S +D++T S++ +
Sbjct: 80 SGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALS 139
Query: 438 PESVAIVMAPQDATRKHGI---FRLTSPGGMSVIRQCQQ 473
+VA+V+ P + + + FR +P M++ ++ +Q
Sbjct: 140 DRAVAVVVDPIQSVKGKVVIDAFRTINPQSMALNQEPRQ 178
>sp|Q9LT08|PSDE_ARATH 26S proteasome non-ATPase regulatory subunit 14 OS=Arabidopsis
thaliana GN=RPN11 PE=2 SV=1
Length = 308
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 24/180 (13%)
Query: 324 SDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNR-KFYITALIIPKQ 382
S D SE Q++IS+ + +K ++ +E G++ G + + + Q
Sbjct: 21 SPTLDTSE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDEYTVRVVDVFAMPQ 76
Query: 383 ESTSDSCQATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQI 435
T S +A + +F+ Q R +GW H+HP C++S +D++T S++
Sbjct: 77 SGTGVSVEAV--DHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEA 134
Query: 436 MLPESVAIVMAPQDATRKHGI---FRLTSPGGMSVIRQCQQRGFHPHDPPPDGGPIYKPC 492
+ +VA+V+ P + + + FR +P Q G P + G + KP
Sbjct: 135 LNQRAVAVVVDPIQSVKGKVVIDAFRSINP-------QTIMLGQEPRQTTSNLGHLNKPS 187
>sp|Q4IJM4|CSN5_GIBZE COP9 signalosome complex subunit 5 OS=Gibberella zeae (strain PH-1
/ ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RRI1 PE=3
SV=1
Length = 340
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Query: 328 DRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSD 387
D S + IS T + A+S NLE G++ G + F +T E T
Sbjct: 45 DPSHFKHVRISATALIKMTMHARSGG--NLEVMGLMQGYTQGDTFIVTDAFRLPVEGTET 102
Query: 388 SCQATNE--EEIFEVQD-----KRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPES 440
A +E E I E D R +GW H+HP C++S IDV T Q
Sbjct: 103 RVNAQDEANEYIVEYLDLCRAQGRQENVVGWYHSHPGYGCWLSGIDVDTEAMQQQFQDPF 162
Query: 441 VAIVMAP 447
+A+V+ P
Sbjct: 163 LAVVIDP 169
>sp|P0CQ24|CSN5_CRYNJ COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=RRI1 PE=3 SV=1
Length = 371
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 17/152 (11%)
Query: 329 RSEPLQLH---ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQEST 385
R++P H IS + + A+S E GI+ G +++ F+I + + T
Sbjct: 42 RTDPHYFHTVKISAVALIKMVTHARSGGI--YEIMGIMYGKVRDGTFWIMDVAALPVQGT 99
Query: 386 SDSCQATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLP 438
A NE + V + + GW H+HP C++S IDV+T + Q
Sbjct: 100 ETRVNAGNEAMEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFND 159
Query: 439 ESVAIVMAPQDATRKH----GIFRLTSPGGMS 466
+A+V+ P G FR T P G +
Sbjct: 160 PYLAVVIDPNRTVSAGKVEIGAFR-TYPEGYT 190
>sp|P0CQ25|CSN5_CRYNB COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=RRI1 PE=3 SV=1
Length = 371
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 17/152 (11%)
Query: 329 RSEPLQLH---ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQEST 385
R++P H IS + + A+S E GI+ G +++ F+I + + T
Sbjct: 42 RTDPHYFHTVKISAVALIKMVTHARSGGI--YEIMGIMYGKVRDGTFWIMDVAALPVQGT 99
Query: 386 SDSCQATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLP 438
A NE + V + + GW H+HP C++S IDV+T + Q
Sbjct: 100 ETRVNAGNEAMEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFND 159
Query: 439 ESVAIVMAPQDATRKH----GIFRLTSPGGMS 466
+A+V+ P G FR T P G +
Sbjct: 160 PYLAVVIDPNRTVSAGKVEIGAFR-TYPEGYT 190
>sp|Q4P804|CSN5_USTMA COP9 signalosome complex subunit 5 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=RRI1 PE=3 SV=1
Length = 406
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 358 ETCGILAGSL--KNRKFYITALIIPKQESTSDSCQATNEEEIFEVQD-------KRSLFP 408
E G++ G + +NR Y+ E T A NE + VQ R
Sbjct: 82 EIMGLMQGKIDVENRTLYVMDSFALPVEGTETRVNAQNEAYEYMVQYLDHSKEVGRLENV 141
Query: 409 LGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 447
+GW H+HP C++S IDV+T + Q VAIV+ P
Sbjct: 142 VGWYHSHPGYGCWLSGIDVNTQRTNQQFQDPFVAIVIDP 180
>sp|P91001|CSN5_CAEEL COP9 signalosome complex subunit 5 OS=Caenorhabditis elegans
GN=csn-5 PE=1 SV=1
Length = 368
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
Query: 334 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQA-- 391
Q+ IS + AK NLE G+L G + F I + E T A
Sbjct: 55 QIKISAIALLKMTMHAKRGG--NLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNAQA 112
Query: 392 ------TNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVM 445
T E+ + + ++ +GW H+HP C++S IDV T Q VAIV+
Sbjct: 113 QAYEYMTVYSEMCDTEGRKEKV-VGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVI 171
Query: 446 AP 447
P
Sbjct: 172 DP 173
>sp|Q4WZP2|CSN5_ASPFU COP9 signalosome complex subunit 5 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=csn5
PE=3 SV=2
Length = 334
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 351 SNTDKNLETCGILAGSLKNRKFYIT-ALIIPKQ--ESTSDSCQATNEEEIFEVQDKRSLF 407
+ + +LE G++ G + F +T A +P + E+ ++ + NE + +Q R
Sbjct: 65 ARSGGSLEVMGLMQGYILPETFVVTDAFRLPVEGTETRVNAQEEANEYMVSYLQSCRDAG 124
Query: 408 ----PLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQ 448
+GW H+HP C++S IDV T Q+ P VA+V+ P+
Sbjct: 125 RMENAVGWYHSHPGYGCWLSGIDVTTQDMQQLGGP-FVAVVIDPE 168
>sp|Q5BBF1|CSN5_EMENI COP9 signalosome complex subunit 5 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rri1 PE=1 SV=2
Length = 335
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 335 LHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNE 394
+ IS + + A+S +LE G++ G + F +T E T A +E
Sbjct: 51 VRISAVALLKMVMHARSG--GSLEVMGLMQGYILPNTFVVTDAFRLPVEGTETRVNAQDE 108
Query: 395 EEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 447
+ V + R +GW H+HP C++S IDV T Q+ P VA+V+ P
Sbjct: 109 ANEYMVSYLQSCREAGRMENAVGWYHSHPGYGCWLSGIDVSTQDMQQMSGP-FVAVVIDP 167
Query: 448 Q 448
+
Sbjct: 168 E 168
>sp|Q8SQY3|RPN11_ENCCU 26S proteasome regulatory subunit RPN11 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=RPN11 PE=1 SV=1
Length = 294
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Query: 328 DRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSD 387
D SE +Q IS+ + +K ++ LE G++ G + ++ + + + +
Sbjct: 16 DASETVQ--ISSLALLKMLKHGRAGIP--LEVMGLMLGEFVD-EYTVKVVDVFAMPQSGT 70
Query: 388 SCQATNEEEIFEVQ-------DKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPES 440
+ + + IF+++ R +GW H+HP C++S++D+ T S++ + +
Sbjct: 71 NVTVESVDPIFQMEMMSILKATGRHETVVGWYHSHPGFGCWLSTVDISTQQSFEKLCKRA 130
Query: 441 VAIVMAPQDATRKHGI---FRL 459
VA+V+ P + + + FRL
Sbjct: 131 VAVVVDPIQSVKGKVVIDAFRL 152
>sp|O94454|CSN5_SCHPO COP9 signalosome complex subunit 5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=csn5 PE=1 SV=1
Length = 299
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 11/124 (8%)
Query: 357 LETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDK---RSLF----PL 409
LE G + G ++ I E T A E + + VQ +S++ +
Sbjct: 55 LEVMGYVQGKVEGASLIILDSFALPVEGTETRVNAHEEAQEYSVQYHTLCKSVYRHENVI 114
Query: 410 GWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATR----KHGIFRLTSPGGM 465
GW H+HP C++S +DV T Q VA+V+ P+ + G FR G
Sbjct: 115 GWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLDPKRSLESPYVNIGAFRTYPVGND 174
Query: 466 SVIR 469
IR
Sbjct: 175 GSIR 178
>sp|Q54PF3|CSN5_DICDI COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum
GN=csn5 PE=1 SV=1
Length = 332
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 52/140 (37%), Gaps = 12/140 (8%)
Query: 336 HISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEE 395
H+ + + + + + LE G+L G ++N I E T A E
Sbjct: 53 HVKISAIALLKMVMHARSGGKLEVMGMLMGKVENNTMIIMDSFALPVEGTETRVNAQVEA 112
Query: 396 EIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQ 448
+ V Q R LGW H+HP C++S IDV T Q + IV+ P
Sbjct: 113 YEYMVEYLELIKQTGRLENALGWYHSHPGYGCWLSGIDVGTQSVNQQYSEPWLGIVIDPT 172
Query: 449 DATRKH----GIFRLTSPGG 464
G FR T P G
Sbjct: 173 RTVSAGKVEIGAFR-TYPQG 191
>sp|Q75E19|CSN5_ASHGO COP9 signalosome complex subunit 5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RRI1
PE=3 SV=1
Length = 420
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 346 MKLAKSNTDK-NLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKR 404
MK+ + D ++E G+L G +++ + E T A E + VQ
Sbjct: 81 MKILRHAFDGGDMEVLGMLLGYVQDEMIVVVDSYRLPVEGTETRVNAQMESYEYTVQYLE 140
Query: 405 SLFP-----LGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQ 448
+ P +GW H+HP C++S ID T Q +AIV+ P+
Sbjct: 141 TAVPEGLAIVGWYHSHPGYGCWLSGIDAETQTLNQNFQDPYLAIVVDPK 189
>sp|Q3TV65|MPND_MOUSE MPN domain-containing protein OS=Mus musculus GN=Mpnd PE=2 SV=2
Length = 487
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 11/117 (9%)
Query: 326 AFDRSEPLQLHISTT---MMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITAL-IIPK 381
A ++ +P + +S+ ++D L +S E G L G +T L P
Sbjct: 249 AINKFQPFNVAVSSNVLFLLDFHCHLTRS------EVVGYLGGRWDINNQMLTVLRAFPC 302
Query: 382 QESTSDS-CQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIML 437
+ D+ AT EEEI++V R L +GW H+HP S D+ YQ+ L
Sbjct: 303 RSRLGDTDTAATVEEEIYQVLFLRGLSLVGWYHSHPHSPAVPSLQDIDAQMEYQLRL 359
>sp|Q6FT36|CSN5_CANGA COP9 signalosome complex subunit 5 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RRI1 PE=3 SV=1
Length = 465
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 16/127 (12%)
Query: 348 LAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQ------ 401
L + N+E G+L G++ F I E T A E + VQ
Sbjct: 85 LCHATKGGNIEVMGMLLGNVIGNTFVIFDCFELPVEGTETMVNAHMESYEYMVQFYHEMV 144
Query: 402 ------DKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQ----DAT 451
++ +L +GW H+HP C++S+ID+ T Q +AIV+ P D
Sbjct: 145 ERSYTRNEENLNIIGWYHSHPGYDCWLSNIDMQTQSLNQQHQDPYLAIVVDPHKSKNDQK 204
Query: 452 RKHGIFR 458
+ G FR
Sbjct: 205 VRIGSFR 211
>sp|Q12468|CSN5_YEAST COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RRI1 PE=1 SV=2
Length = 440
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 406 LFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP----QDATRKHGIFR 458
L +GW H+HP C++S+ID+ T Q VAIV+ P +D + G FR
Sbjct: 157 LNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFR 213
>sp|A6ZXB7|CSN5_YEAS7 COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae
(strain YJM789) GN=RRI1 PE=3 SV=2
Length = 440
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 406 LFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP----QDATRKHGIFR 458
L +GW H+HP C++S+ID+ T Q VAIV+ P +D + G FR
Sbjct: 157 LNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFR 213
>sp|B3LH96|CSN5_YEAS1 COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=RRI1 PE=3 SV=2
Length = 440
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 406 LFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP----QDATRKHGIFR 458
L +GW H+HP C++S+ID+ T Q VAIV+ P +D + G FR
Sbjct: 157 LNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFR 213
>sp|Q6P635|CSN5_XENTR COP9 signalosome complex subunit 5 OS=Xenopus tropicalis GN=cops5
PE=2 SV=1
Length = 334
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 27/148 (18%)
Query: 351 SNTDKNLETCGILAGSLKNRKFYIT---ALIIPKQESTSDSCQATNEEEIFEVQDKRSLF 407
+ + NLE G++ G + I AL + E+ ++ A E +++ + +
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVG 128
Query: 408 PL----GWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH----GIFRL 459
L GW H+HP C++S IDV T Q VA+V+ P G FR
Sbjct: 129 RLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR- 187
Query: 460 TSPGGMSVIRQCQQRGFHPHDPPPDGGP 487
T P G PPD GP
Sbjct: 188 TYPKGY---------------KPPDEGP 200
>sp|Q6GLM9|CSN5_XENLA COP9 signalosome complex subunit 5 OS=Xenopus laevis GN=cops5 PE=2
SV=1
Length = 332
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 27/148 (18%)
Query: 351 SNTDKNLETCGILAGSLKNRKFYIT---ALIIPKQESTSDSCQATNEEEIFEVQDKRSLF 407
+ + NLE G++ G + I AL + E+ ++ A E +++ + +
Sbjct: 67 ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVG 126
Query: 408 PL----GWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH----GIFRL 459
L GW H+HP C++S IDV T Q VA+V+ P G FR
Sbjct: 127 RLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR- 185
Query: 460 TSPGGMSVIRQCQQRGFHPHDPPPDGGP 487
T P G PPD GP
Sbjct: 186 TYPKGY---------------KPPDEGP 198
>sp|O35864|CSN5_MOUSE COP9 signalosome complex subunit 5 OS=Mus musculus GN=Cops5 PE=1
SV=3
Length = 334
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 27/148 (18%)
Query: 351 SNTDKNLETCGILAGSLKNRKFYIT---ALIIPKQESTSDSCQATNEEEIFEVQDKRSLF 407
+ + NLE G++ G + I AL + E+ ++ A E +++ + +
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVG 128
Query: 408 PL----GWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH----GIFRL 459
L GW H+HP C++S IDV T Q VA+V+ P G FR
Sbjct: 129 RLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR- 187
Query: 460 TSPGGMSVIRQCQQRGFHPHDPPPDGGP 487
T P G PPD GP
Sbjct: 188 TYPKGY---------------KPPDEGP 200
>sp|Q6PC30|CSN5_DANRE COP9 signalosome complex subunit 5 OS=Danio rerio GN=cops5 PE=2
SV=1
Length = 334
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 27/148 (18%)
Query: 351 SNTDKNLETCGILAGSLKNRKFYIT---ALIIPKQESTSDSCQATNEEEIFEVQDKRSLF 407
+ + NLE G++ G + I AL + E+ ++ A E +++ + +
Sbjct: 67 ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVG 126
Query: 408 PL----GWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH----GIFRL 459
L GW H+HP C++S IDV T Q VA+V+ P G FR
Sbjct: 127 RLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR- 185
Query: 460 TSPGGMSVIRQCQQRGFHPHDPPPDGGP 487
T P G PPD GP
Sbjct: 186 TYPKGY---------------KPPDEGP 198
>sp|Q92905|CSN5_HUMAN COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=1
SV=4
Length = 334
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 27/148 (18%)
Query: 351 SNTDKNLETCGILAGSLKNRKFYIT---ALIIPKQESTSDSCQATNEEEIFEVQDKRSLF 407
+ + NLE G++ G + I AL + E+ ++ A E +++ + +
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVG 128
Query: 408 PL----GWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRKH----GIFRL 459
L GW H+HP C++S IDV T Q VA+V+ P G FR
Sbjct: 129 RLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR- 187
Query: 460 TSPGGMSVIRQCQQRGFHPHDPPPDGGP 487
T P G PPD GP
Sbjct: 188 TYPKGY---------------KPPDEGP 200
>sp|Q6C703|CSN5_YARLI COP9 signalosome complex subunit 5 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RRI1 PE=3 SV=1
Length = 354
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
Query: 357 LETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLG------ 410
+E G++ G + F + E T A E F V+ + L +G
Sbjct: 76 IEVMGMMTGKILPNTFVVMDCYPLPVEGTETRVNAQQEGIEFMVEYLQGLKDVGRRENIV 135
Query: 411 -WIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 447
W H+HP C++S IDV T + Q +A+V+ P
Sbjct: 136 GWYHSHPGYGCWLSGIDVDTQFQNQQFQEPFLAVVVDP 173
>sp|Q9XZ58|CSN5_DROME COP9 signalosome complex subunit 5 OS=Drosophila melanogaster
GN=CSN5 PE=1 SV=1
Length = 327
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 351 SNTDKNLETCGILAGSLK-NRKFYITALIIPKQES-TSDSCQATNEEEIFEVQDK----- 403
+ + LE G++ G ++ N + A +P + + T + QA E + +
Sbjct: 66 ARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVG 125
Query: 404 RSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAP 447
R +GW H+HP C++S IDV T Q VAIV+ P
Sbjct: 126 RMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDP 169
>sp|Q59PG6|CSN5_CANAL COP9 signalosome complex subunit 5 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=RRI1 PE=3 SV=1
Length = 213
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 50/132 (37%), Gaps = 15/132 (11%)
Query: 345 FMKLA-KSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQ-- 401
MK+ + T ++E G+L G + + E T A NE + V+
Sbjct: 82 LMKMCTHAQTGGSIEIMGMLVGKISGHSIIVMDTYRLPVEGTETRVNAQNEAYTYMVEYL 141
Query: 402 --------DKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDATRK 453
K +GW H HP C++ IDV T Q + +AIV+ P ++
Sbjct: 142 TERQQLSNGKNEENIVGWYHRHPRYGCWLKGIDVSTQSLNQGLQDPYLAIVVDPVKTLKQ 201
Query: 454 H----GIFRLTS 461
G FR S
Sbjct: 202 GKVEIGAFRNVS 213
>sp|Q6CRJ8|CSN5_KLULA COP9 signalosome complex subunit 5 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=RRI1 PE=3 SV=1
Length = 373
Score = 39.3 bits (90), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 14/131 (10%)
Query: 337 ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEE 396
++TT M L+ + ++E G+L G N + + T A E
Sbjct: 71 LATTKM-----LSHAVDGGDIEVMGMLVGYTSNDMIVVKDCYSLPVQGTETRVNAHMESY 125
Query: 397 IFEVQDKRSLFP-----LGWIHTHPTQSCFMSSIDVHTHYSYQIMLPESVAIVMAPQDA- 450
+ VQ + +GW H+HP C++S+ID+ T Q +AIV+ P+ +
Sbjct: 126 EYMVQYLDAFVTKEDKIVGWYHSHPGYGCWLSNIDIQTQSLNQNYQDPYLAIVVDPKKSL 185
Query: 451 ---TRKHGIFR 458
T G FR
Sbjct: 186 SGNTLDIGAFR 196
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,060,751
Number of Sequences: 539616
Number of extensions: 7782973
Number of successful extensions: 22638
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 22494
Number of HSP's gapped (non-prelim): 171
length of query: 509
length of database: 191,569,459
effective HSP length: 122
effective length of query: 387
effective length of database: 125,736,307
effective search space: 48659950809
effective search space used: 48659950809
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)