Query 010478
Match_columns 509
No_of_seqs 315 out of 1889
Neff 8.7
Searched_HMMs 13730
Date Mon Mar 25 07:40:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010478.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010478hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2astb2 c.10.1.3 (B:2136-2419) 99.1 4.8E-12 3.5E-16 121.3 -0.7 83 243-325 44-132 (284)
2 d1fs1a1 a.158.1.1 (A:109-149) 98.9 3.9E-10 2.8E-14 73.7 4.1 35 114-148 1-35 (41)
3 d2astb2 c.10.1.3 (B:2136-2419) 98.9 5.4E-11 3.9E-15 113.8 -1.8 169 242-417 68-252 (284)
4 d2ovrb1 a.158.1.1 (B:2263-2364 98.5 2E-08 1.5E-12 79.9 3.7 37 111-147 16-52 (102)
5 d1nexb1 a.158.1.1 (B:270-369) 98.5 1.1E-08 7.8E-13 81.2 1.0 39 111-149 3-41 (100)
6 d1p22a1 a.158.1.1 (A:135-252) 98.1 3.7E-07 2.7E-11 74.4 2.0 37 111-147 8-48 (118)
7 d1h6ua2 c.10.2.1 (A:36-262) In 97.9 1.8E-06 1.3E-10 78.4 2.7 60 241-304 59-118 (227)
8 d1h6ta2 c.10.2.1 (A:31-240) In 97.7 4.5E-06 3.3E-10 74.9 2.0 57 360-423 153-209 (210)
9 d2omxa2 c.10.2.1 (A:37-235) In 97.7 5.1E-06 3.7E-10 73.9 2.1 35 243-280 60-94 (199)
10 d1h6ta2 c.10.2.1 (A:31-240) In 97.5 1.5E-05 1.1E-09 71.3 2.4 142 241-394 64-208 (210)
11 d1p9ag_ c.10.2.7 (G:) von Will 97.5 5E-05 3.6E-09 70.4 6.1 189 245-470 31-225 (266)
12 d2omxa2 c.10.2.1 (A:37-235) In 97.4 1.3E-05 9.3E-10 71.1 1.1 160 243-419 38-199 (199)
13 d2ca6a1 c.10.1.2 (A:2-345) Rna 97.2 1.8E-05 1.3E-09 76.4 -0.5 268 197-478 16-310 (344)
14 d1h6ua2 c.10.2.1 (A:36-262) In 97.2 5.4E-05 3.9E-09 68.3 2.2 143 241-422 81-225 (227)
15 d2omza2 c.10.2.1 (A:33-416) In 97.1 0.00011 8.1E-09 71.1 3.4 186 241-450 193-381 (384)
16 d2omza2 c.10.2.1 (A:33-416) In 97.0 8.2E-05 6E-09 72.1 1.8 164 241-422 215-381 (384)
17 d1a9na_ c.10.2.4 (A:) Spliceso 96.9 8.8E-05 6.4E-09 63.3 1.1 38 242-281 15-52 (162)
18 d1xwdc1 c.10.2.7 (C:18-259) Fo 96.9 0.00097 7.1E-08 60.0 7.7 195 244-452 28-232 (242)
19 d1a9na_ c.10.2.4 (A:) Spliceso 96.7 0.00014 1E-08 61.9 0.8 37 242-281 38-74 (162)
20 d1p9ag_ c.10.2.7 (G:) von Will 96.6 0.00024 1.8E-08 65.5 1.5 163 240-411 50-221 (266)
21 d2ca6a1 c.10.1.2 (A:2-345) Rna 96.5 0.00011 7.8E-09 70.6 -1.7 193 242-451 90-311 (344)
22 d1ogqa_ c.10.2.8 (A:) Polygala 96.3 0.00055 4E-08 64.4 2.1 62 241-303 72-135 (313)
23 d1ozna_ c.10.2.7 (A:) Reticulo 96.1 0.00062 4.5E-08 63.2 1.0 190 245-451 32-234 (284)
24 d1ozna_ c.10.2.7 (A:) Reticulo 95.9 0.001 7.3E-08 61.7 1.3 173 241-423 52-234 (284)
25 d1z7xw1 c.10.1.1 (W:1-460) Rib 95.2 0.0049 3.6E-07 60.1 3.8 37 245-281 2-38 (460)
26 d1pgva_ c.10.1.1 (A:) Tropomod 95.1 0.0024 1.7E-07 54.2 0.9 67 357-423 66-140 (167)
27 d1m9la_ c.10.3.1 (A:) Outer ar 94.4 0.00081 5.9E-08 59.0 -4.0 38 241-281 44-81 (198)
28 d1xkua_ c.10.2.7 (A:) Decorin 94.4 0.0079 5.8E-07 55.8 2.7 167 241-423 51-228 (305)
29 d1xkua_ c.10.2.7 (A:) Decorin 94.1 0.0063 4.6E-07 56.5 1.3 171 244-423 30-204 (305)
30 d1io0a_ c.10.1.1 (A:) Tropomod 94.0 0.0035 2.5E-07 53.0 -0.7 66 358-423 69-141 (166)
31 d1dcea3 c.10.2.2 (A:444-567) R 93.5 0.0036 2.6E-07 50.2 -1.6 39 241-281 16-54 (124)
32 d1xwdc1 c.10.2.7 (C:18-259) Fo 93.4 0.05 3.6E-06 48.1 6.2 64 241-304 49-114 (242)
33 d1w8aa_ c.10.2.7 (A:) Slit {Fr 91.7 0.023 1.7E-06 48.7 1.3 37 245-281 29-65 (192)
34 d1z7xw1 c.10.1.1 (W:1-460) Rib 91.0 0.015 1.1E-06 56.5 -0.9 81 337-423 3-93 (460)
35 d1ogqa_ c.10.2.8 (A:) Polygala 90.6 0.022 1.6E-06 52.9 -0.1 99 245-345 50-158 (313)
36 d1io0a_ c.10.1.1 (A:) Tropomod 90.1 0.04 2.9E-06 46.0 1.2 126 352-480 6-142 (166)
37 d1dcea3 c.10.2.2 (A:444-567) R 90.1 0.1 7.3E-06 41.2 3.6 32 361-394 41-73 (124)
38 d1w8aa_ c.10.2.7 (A:) Slit {Fr 88.9 0.093 6.8E-06 44.7 2.8 11 361-371 76-86 (192)
39 d1pgva_ c.10.1.1 (A:) Tropomod 86.1 0.14 1E-05 42.5 2.1 121 356-479 8-140 (167)
40 d1m9la_ c.10.3.1 (A:) Outer ar 85.8 0.01 7.5E-07 51.6 -5.7 61 241-304 66-126 (198)
41 d2ifga3 c.10.2.7 (A:36-191) Hi 85.1 0.67 4.9E-05 37.7 6.0 96 361-467 29-130 (156)
42 d1jl5a_ c.10.2.6 (A:) Leucine 83.6 0.28 2E-05 45.1 3.2 73 244-325 57-131 (353)
43 d2ifga3 c.10.2.7 (A:36-191) Hi 82.1 0.33 2.4E-05 39.7 2.7 75 332-411 52-129 (156)
44 d1jl5a_ c.10.2.6 (A:) Leucine 75.7 0.53 3.8E-05 43.1 2.2 50 293-345 284-333 (353)
45 d1koha1 c.10.2.3 (A:201-362) m 51.7 0.8 5.8E-05 37.4 -1.7 20 457-476 133-152 (162)
46 d1koha1 c.10.2.3 (A:201-362) m 36.1 1.8 0.00013 35.1 -2.0 14 267-280 62-75 (162)
No 1
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=4.8e-12 Score=121.34 Aligned_cols=83 Identities=18% Similarity=0.141 Sum_probs=55.8
Q ss_pred cCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeeccccee-eEEEecccccceEEEEecccCccE-----EEEECCce
Q 010478 243 GVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLV-SLKVVGSAIQLKHLRISTCYRLNE-----IKISTPNL 316 (509)
Q Consensus 243 ~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~-~l~i~~~~~~Lk~L~l~~c~~l~~-----l~i~aP~L 316 (509)
...+|++|+|+++.++++.+..++++||+|++|++.+|.... .+..-..+++|++|++.+|..+.. +.-.+|+|
T Consensus 44 ~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L 123 (284)
T d2astb2 44 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123 (284)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred cCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhc
Confidence 346788888888888888888888888999999888885211 111112347788888888875432 11235677
Q ss_pred eEEEEecCC
Q 010478 317 LSFKYFGPG 325 (509)
Q Consensus 317 ~~L~~~g~~ 325 (509)
++|.++++.
T Consensus 124 ~~L~ls~c~ 132 (284)
T d2astb2 124 DELNLSWCF 132 (284)
T ss_dssp CEEECCCCT
T ss_pred ccccccccc
Confidence 777666653
No 2
>d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.92 E-value=3.9e-10 Score=73.70 Aligned_cols=35 Identities=40% Similarity=0.538 Sum_probs=32.8
Q ss_pred CCCCcHHHHHHHHcCCChhhHHHHHhhhhhhhhhc
Q 010478 114 MSLLPDDILINIISRLPLKEAAKTSVLSSRWKYLW 148 (509)
Q Consensus 114 is~LPdeiL~~ILs~Lp~~d~~rts~lSrRWr~lw 148 (509)
++.||+||+.+||++||.+|.++++.|||+|+++-
T Consensus 1 f~~LP~eil~~If~~L~~~dl~~~~~Vcr~w~~l~ 35 (41)
T d1fs1a1 1 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLA 35 (41)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHH
T ss_pred CCcCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999999863
No 3
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.88 E-value=5.4e-11 Score=113.80 Aligned_cols=169 Identities=19% Similarity=0.286 Sum_probs=96.6
Q ss_pred ccCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeE---EEecccccceEEEEecccCccE------EEEE
Q 010478 242 SGVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSL---KVVGSAIQLKHLRISTCYRLNE------IKIS 312 (509)
Q Consensus 242 ~~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l---~i~~~~~~Lk~L~l~~c~~l~~------l~i~ 312 (509)
..+++|++|+|.++.+++..+.. +..||+|++|++++|.+++.. .+...+++|++|++.+|..+.+ +.-.
T Consensus 68 ~~c~~L~~L~L~~~~l~~~~~~~-l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~ 146 (284)
T d2astb2 68 SQCSKLQNLSLEGLRLSDPIVNT-LAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHV 146 (284)
T ss_dssp TTBCCCSEEECTTCBCCHHHHHH-HTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHS
T ss_pred HhCCCcccccccccCCCcHHHHH-HhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhccc
Confidence 45667777777766666655544 345667777777776655421 2233456677777766654321 1112
Q ss_pred CCceeEEEEecCCcc-----ceeeecCCCCceEEEEEeccchhhhhhhcccccCCCCccEEEEeechhhh-hccC-CCCC
Q 010478 313 TPNLLSFKYFGPGQE-----LKLHIENAPQLVDISFRGVMLTRVRNVVGPITSCFPQLKTLELDSCDELY-AQFS-EHEL 385 (509)
Q Consensus 313 aP~L~~L~~~g~~~~-----~~~~~~~~~~L~~l~i~~~~~~~~~~~~~~l~~~l~~L~~L~L~~~~~~~-~~~~-~~~f 385 (509)
+|+|+.|.+.|+... ......++|+|+++++..... ..+..+.. +..+++|++|.|+.|..+. ..+. ...+
T Consensus 147 ~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~-itd~~~~~-l~~~~~L~~L~L~~C~~i~~~~l~~L~~~ 224 (284)
T d2astb2 147 SETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM-LKNDCFQE-FFQLNYLQHLSLSRCYDIIPETLLELGEI 224 (284)
T ss_dssp CTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTT-CCGGGGGG-GGGCTTCCEEECTTCTTCCGGGGGGGGGC
T ss_pred ccccchhhhcccccccccccccccccccccccccccccccC-CCchhhhh-hcccCcCCEEECCCCCCCChHHHHHHhcC
Confidence 466777776665310 111234566777766654110 11222222 3467889999998777662 2222 5677
Q ss_pred CcccEEEEEeeccCccCHHHHHHHhhcCCCCc
Q 010478 386 PNLTHLHLRVATLNRESLLGLASIMKACPFLQ 417 (509)
Q Consensus 386 ~~Lk~L~L~~~~~~~~~~~~l~~lL~~~P~Le 417 (509)
++|++|++..+ ..+.++..+.+.+|+|+
T Consensus 225 ~~L~~L~l~~~----~~d~~l~~l~~~lp~L~ 252 (284)
T d2astb2 225 PTLKTLQVFGI----VPDGTLQLLKEALPHLQ 252 (284)
T ss_dssp TTCCEEECTTS----SCTTCHHHHHHHSTTSE
T ss_pred CCCCEEeeeCC----CCHHHHHHHHHhCcccc
Confidence 88999888432 33445777788888876
No 4
>d2ovrb1 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.53 E-value=2e-08 Score=79.87 Aligned_cols=37 Identities=27% Similarity=0.558 Sum_probs=35.4
Q ss_pred cccCCCCcHHHHHHHHcCCChhhHHHHHhhhhhhhhh
Q 010478 111 EDLMSLLPDDILINIISRLPLKEAAKTSVLSSRWKYL 147 (509)
Q Consensus 111 ~D~is~LPdeiL~~ILs~Lp~~d~~rts~lSrRWr~l 147 (509)
.|.|+.||+||+.+||++|+.+|+++++.|||+|+.+
T Consensus 16 ~D~i~~LP~Eil~~Ils~Ld~~dL~~~~~vcr~w~~l 52 (102)
T d2ovrb1 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRIL 52 (102)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHH
T ss_pred cCChhhCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 5889999999999999999999999999999999985
No 5
>d1nexb1 a.158.1.1 (B:270-369) Cdc4 F-box and linker domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.49 E-value=1.1e-08 Score=81.20 Aligned_cols=39 Identities=23% Similarity=0.459 Sum_probs=35.8
Q ss_pred cccCCCCcHHHHHHHHcCCChhhHHHHHhhhhhhhhhcc
Q 010478 111 EDLMSLLPDDILINIISRLPLKEAAKTSVLSSRWKYLWT 149 (509)
Q Consensus 111 ~D~is~LPdeiL~~ILs~Lp~~d~~rts~lSrRWr~lw~ 149 (509)
.|.|+.||+||+.+||++|+.+|.++++.|||+|+++..
T Consensus 3 ~D~~~~LP~Ell~~I~s~Ld~~dL~~~s~Vcr~W~~~~~ 41 (100)
T d1nexb1 3 RDLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIR 41 (100)
T ss_dssp CCHHHHSCHHHHHHHHTTSCHHHHHHHTTTCHHHHHHHH
T ss_pred CCchhhCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999987543
No 6
>d1p22a1 a.158.1.1 (A:135-252) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.11 E-value=3.7e-07 Score=74.37 Aligned_cols=37 Identities=30% Similarity=0.534 Sum_probs=34.1
Q ss_pred cccCCCCc----HHHHHHHHcCCChhhHHHHHhhhhhhhhh
Q 010478 111 EDLMSLLP----DDILINIISRLPLKEAAKTSVLSSRWKYL 147 (509)
Q Consensus 111 ~D~is~LP----deiL~~ILs~Lp~~d~~rts~lSrRWr~l 147 (509)
.|.|+.|| |||+.+|||||+.+|.++++.|||+|+++
T Consensus 8 ~D~i~~LP~~l~~EI~~~Ils~Ld~~dL~~~s~Vck~W~~l 48 (118)
T d1p22a1 8 RDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRV 48 (118)
T ss_dssp CCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHH
T ss_pred ccHHHHCCCCChHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 47899999 69999999999999999999999999873
No 7
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=97.89 E-value=1.8e-06 Score=78.40 Aligned_cols=60 Identities=15% Similarity=0.176 Sum_probs=34.7
Q ss_pred CccCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeEEEecccccceEEEEeccc
Q 010478 241 LSGVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSLKVVGSAIQLKHLRISTCY 304 (509)
Q Consensus 241 ~~~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l~i~~~~~~Lk~L~l~~c~ 304 (509)
+..+++|++|+|++..+.+-. . +..++.|+.|.+.++.. +.+.--..+++|+.|.+.+|.
T Consensus 59 l~~l~~L~~L~ls~n~i~~~~--~-l~~l~~l~~l~~~~n~~-~~i~~l~~l~~L~~l~l~~~~ 118 (227)
T d1h6ua2 59 VQYLNNLIGLELKDNQITDLA--P-LKNLTKITELELSGNPL-KNVSAIAGLQSIKTLDLTSTQ 118 (227)
T ss_dssp GGGCTTCCEEECCSSCCCCCG--G-GTTCCSCCEEECCSCCC-SCCGGGTTCTTCCEEECTTSC
T ss_pred HhcCCCCcEeecCCceeeccc--c-ccccccccccccccccc-ccccccccccccccccccccc
Confidence 456777787777776665421 1 56677777777776642 211111234566666666554
No 8
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=97.71 E-value=4.5e-06 Score=74.91 Aligned_cols=57 Identities=21% Similarity=0.219 Sum_probs=29.8
Q ss_pred cCCCCccEEEEeechhhhhccCCCCCCcccEEEEEeeccCccCHHHHHHHhhcCCCCcEEEEEE
Q 010478 360 SCFPQLKTLELDSCDELYAQFSEHELPNLTHLHLRVATLNRESLLGLASIMKACPFLQTLIVQF 423 (509)
Q Consensus 360 ~~l~~L~~L~L~~~~~~~~~~~~~~f~~Lk~L~L~~~~~~~~~~~~l~~lL~~~P~Le~L~i~~ 423 (509)
..+++|+.+.+..+ .+....++..+++|++|+|..+.-. + +. -+..+++|+.|+|..
T Consensus 153 ~~l~~L~~l~l~~n-~l~~i~~l~~l~~L~~L~Ls~N~i~--~---l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 153 SRLTKLDTLSLEDN-QISDIVPLAGLTKLQNLYLSKNHIS--D---LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp GGCTTCSEEECCSS-CCCCCGGGTTCTTCCEEECCSSCCC--B---CG-GGTTCTTCSEEEEEE
T ss_pred cccccccccccccc-cccccccccCCCCCCEEECCCCCCC--C---Ch-hhcCCCCCCEEEccC
Confidence 34666777777633 2211112456677777777433211 1 11 255667777777653
No 9
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=97.70 E-value=5.1e-06 Score=73.86 Aligned_cols=35 Identities=14% Similarity=0.082 Sum_probs=16.0
Q ss_pred cCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeecc
Q 010478 243 GVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRS 280 (509)
Q Consensus 243 ~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c 280 (509)
.+++|++|+|++..+++-. . +.++|.|+.|.+.++
T Consensus 60 ~l~nL~~L~Ls~N~l~~~~--~-l~~l~~L~~L~l~~n 94 (199)
T d2omxa2 60 YLNNLTQINFSNNQLTDIT--P-LKNLTKLVDILMNNN 94 (199)
T ss_dssp GCTTCCEEECCSSCCCCCG--G-GTTCTTCCEEECCSS
T ss_pred cCCCcCcCccccccccCcc--c-ccCCccccccccccc
Confidence 4455555555544443311 1 344555555555444
No 10
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=97.50 E-value=1.5e-05 Score=71.28 Aligned_cols=142 Identities=18% Similarity=0.144 Sum_probs=85.9
Q ss_pred CccCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeEEEecccccceEEEEecccCccEEE--EECCceeE
Q 010478 241 LSGVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSLKVVGSAIQLKHLRISTCYRLNEIK--ISTPNLLS 318 (509)
Q Consensus 241 ~~~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l~i~~~~~~Lk~L~l~~c~~l~~l~--i~aP~L~~ 318 (509)
+..+++|++|+|++..+++-. . ++.++.|+.|++.++. ++.+.--..+++|+.|.+.++.. ..+. ...|+|+.
T Consensus 64 l~~l~~L~~L~L~~n~i~~l~--~-~~~l~~L~~L~l~~n~-i~~l~~l~~l~~L~~L~l~~~~~-~~~~~l~~l~~l~~ 138 (210)
T d1h6ta2 64 IQYLPNVTKLFLNGNKLTDIK--P-LANLKNLGWLFLDENK-VKDLSSLKDLKKLKSLSLEHNGI-SDINGLVHLPQLES 138 (210)
T ss_dssp GGGCTTCCEEECCSSCCCCCG--G-GTTCTTCCEEECCSSC-CCCGGGGTTCTTCCEEECTTSCC-CCCGGGGGCTTCCE
T ss_pred HhhCCCCCEEeCCCccccCcc--c-cccCcccccccccccc-ccccccccccccccccccccccc-cccccccccccccc
Confidence 346778888888877766522 1 4567888888887764 22221112346778888777652 1111 13467777
Q ss_pred EEEecCCccceeeecCCCCceEEEEEeccchhhhhhhcccccCCCCccEEEEeechhhhhccC-CCCCCcccEEEEE
Q 010478 319 FKYFGPGQELKLHIENAPQLVDISFRGVMLTRVRNVVGPITSCFPQLKTLELDSCDELYAQFS-EHELPNLTHLHLR 394 (509)
Q Consensus 319 L~~~g~~~~~~~~~~~~~~L~~l~i~~~~~~~~~~~~~~l~~~l~~L~~L~L~~~~~~~~~~~-~~~f~~Lk~L~L~ 394 (509)
+.+.+..-........+++|+.+.+........ .. +..+++|+.|.|+.+ .+. .++ +..+++|++|+|.
T Consensus 139 l~~~~n~l~~~~~~~~l~~L~~l~l~~n~l~~i----~~-l~~l~~L~~L~Ls~N-~i~-~l~~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 139 LYLGNNKITDITVLSRLTKLDTLSLEDNQISDI----VP-LAGLTKLQNLYLSKN-HIS-DLRALAGLKNLDVLELF 208 (210)
T ss_dssp EECCSSCCCCCGGGGGCTTCSEEECCSSCCCCC----GG-GTTCTTCCEEECCSS-CCC-BCGGGTTCTTCSEEEEE
T ss_pred ccccccccccccccccccccccccccccccccc----cc-ccCCCCCCEEECCCC-CCC-CChhhcCCCCCCEEEcc
Confidence 777655411122345678888888776322111 11 367899999999854 332 234 7788999999984
No 11
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.50 E-value=5e-05 Score=70.37 Aligned_cols=189 Identities=25% Similarity=0.204 Sum_probs=104.3
Q ss_pred cCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeEEEecccccceEEEEecccCccEEEEECCceeEEEEecC
Q 010478 245 KYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSLKVVGSAIQLKHLRISTCYRLNEIKISTPNLLSFKYFGP 324 (509)
Q Consensus 245 p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l~i~~~~~~Lk~L~l~~c~~l~~l~i~aP~L~~L~~~g~ 324 (509)
++|+.|+|++-.++.-. ...+.++++|++|+|.++. ++.+.....+++|+.|++.++. +..
T Consensus 31 ~~l~~L~Ls~N~i~~l~-~~~f~~l~~L~~L~L~~N~-l~~l~~~~~l~~L~~L~Ls~N~-l~~---------------- 91 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFS-LATLMPYTRLTQLNLDRAE-LTKLQVDGTLPVLGTLDLSHNQ-LQS---------------- 91 (266)
T ss_dssp TTCCEEECTTSCCSEEE-GGGGTTCTTCCEEECTTSC-CCEEECCSCCTTCCEEECCSSC-CSS----------------
T ss_pred cCCCEEECcCCcCCCcC-HHHhhcccccccccccccc-cccccccccccccccccccccc-ccc----------------
Confidence 57999999877654311 1235678999999999874 4444444455777777777654 211
Q ss_pred CccceeeecCCCCceEEEEEeccchhhhhhhcccccCCCCccEEEEeechhhhhccC--CCCCCcccEEEEEeeccCccC
Q 010478 325 GQELKLHIENAPQLVDISFRGVMLTRVRNVVGPITSCFPQLKTLELDSCDELYAQFS--EHELPNLTHLHLRVATLNRES 402 (509)
Q Consensus 325 ~~~~~~~~~~~~~L~~l~i~~~~~~~~~~~~~~l~~~l~~L~~L~L~~~~~~~~~~~--~~~f~~Lk~L~L~~~~~~~~~ 402 (509)
....+.++++|+.+++...... .........+.+++.|.+..+ .+....+ ...+++|+.|++..+.-....
T Consensus 92 ---~~~~~~~l~~L~~L~l~~~~~~---~~~~~~~~~l~~l~~L~l~~n-~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~ 164 (266)
T d1p9ag_ 92 ---LPLLGQTLPALTVLDVSFNRLT---SLPLGALRGLGELQELYLKGN-ELKTLPPGLLTPTPKLEKLSLANNNLTELP 164 (266)
T ss_dssp ---CCCCTTTCTTCCEEECCSSCCC---CCCSSTTTTCTTCCEEECTTS-CCCCCCTTTTTTCTTCCEEECTTSCCSCCC
T ss_pred ---cccccccccccccccccccccc---eeecccccccccccccccccc-ccceeccccccccccchhcccccccccccC
Confidence 1112344555555555441111 111123345667777777632 2211111 445677777777443221111
Q ss_pred HHHHHHHhhcCCCCcEEEEEEeecCCccCCccccCc--cccCCccEEEEec--ccCCccHHHHHHHHHhcCc
Q 010478 403 LLGLASIMKACPFLQTLIVQFDYNGYKVGRRRKVPR--HSHQHLKLVELHG--FLGRPIDLELAFYILENAM 470 (509)
Q Consensus 403 ~~~l~~lL~~~P~Le~L~i~~~~~~~~~~~~~~~p~--c~~~~Lk~V~i~~--f~g~~~e~~l~~~lL~na~ 470 (509)
...+...++|+.|++.. +.+..+|+ ....+|+.+.+.| +.....-..|.+++-+++.
T Consensus 165 ----~~~~~~l~~L~~L~Ls~-------N~L~~lp~~~~~~~~L~~L~L~~Np~~CdC~~~~l~~wl~~~~~ 225 (266)
T d1p9ag_ 165 ----AGLLNGLENLDTLLLQE-------NSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEILYFRRWLQDNAE 225 (266)
T ss_dssp ----TTTTTTCTTCCEEECCS-------SCCCCCCTTTTTTCCCSEEECCSCCBCCSGGGHHHHHHHHHTGG
T ss_pred ----ccccccccccceeeccc-------CCCcccChhHCCCCCCCEEEecCCCCCCCcchHHHHHHHHhccc
Confidence 23456778888888865 23334442 2357788888887 4444444566666655544
No 12
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=97.45 E-value=1.3e-05 Score=71.14 Aligned_cols=160 Identities=13% Similarity=0.204 Sum_probs=101.7
Q ss_pred cCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeEEEecccccceEEEEecccCccEEE-E-ECCceeEEE
Q 010478 243 GVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSLKVVGSAIQLKHLRISTCYRLNEIK-I-STPNLLSFK 320 (509)
Q Consensus 243 ~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l~i~~~~~~Lk~L~l~~c~~l~~l~-i-~aP~L~~L~ 320 (509)
.+++|+.|++.+..+++ +. -++.+++|+.|+++++. ++.+.--..+++|+.|.+.++.. ..+. + ..++|+.+.
T Consensus 38 ~l~~l~~L~l~~~~i~~--l~-~l~~l~nL~~L~Ls~N~-l~~~~~l~~l~~L~~L~l~~n~~-~~~~~l~~l~~L~~L~ 112 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKS--ID-GVEYLNNLTQINFSNNQ-LTDITPLKNLTKLVDILMNNNQI-ADITPLANLTNLTGLT 112 (199)
T ss_dssp HHTTCCEEECTTSCCCC--CT-TGGGCTTCCEEECCSSC-CCCCGGGTTCTTCCEEECCSSCC-CCCGGGTTCTTCSEEE
T ss_pred HhcCCCEEECCCCCCCC--cc-ccccCCCcCcCcccccc-ccCcccccCCccccccccccccc-cccccccccccccccc
Confidence 46788888888777654 11 14678999999999874 33221123457899999887752 2221 1 367888888
Q ss_pred EecCCccceeeecCCCCceEEEEEeccchhhhhhhcccccCCCCccEEEEeechhhhhccCCCCCCcccEEEEEeeccCc
Q 010478 321 YFGPGQELKLHIENAPQLVDISFRGVMLTRVRNVVGPITSCFPQLKTLELDSCDELYAQFSEHELPNLTHLHLRVATLNR 400 (509)
Q Consensus 321 ~~g~~~~~~~~~~~~~~L~~l~i~~~~~~~~~~~~~~l~~~l~~L~~L~L~~~~~~~~~~~~~~f~~Lk~L~L~~~~~~~ 400 (509)
+.+........+..+++|+.+++....... + .-+..+++++.|.+..+ .+...-++..+++|++|+|..+....
T Consensus 113 l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~----~-~~l~~~~~L~~L~l~~n-~l~~l~~l~~l~~L~~L~ls~N~i~~ 186 (199)
T d2omxa2 113 LFNNQITDIDPLKNLTNLNRLELSSNTISD----I-SALSGLTSLQQLNFSSN-QVTDLKPLANLTTLERLDISSNKVSD 186 (199)
T ss_dssp CCSSCCCCCGGGTTCTTCSEEECCSSCCCC----C-GGGTTCTTCSEEECCSS-CCCCCGGGTTCTTCCEEECCSSCCCC
T ss_pred ccccccccccccchhhhhHHhhhhhhhhcc----c-ccccccccccccccccc-cccCCccccCCCCCCEEECCCCCCCC
Confidence 877663222246678889988887622111 1 12357889999998743 23222126778999999995543222
Q ss_pred cCHHHHHHHhhcCCCCcEE
Q 010478 401 ESLLGLASIMKACPFLQTL 419 (509)
Q Consensus 401 ~~~~~l~~lL~~~P~Le~L 419 (509)
+ ..+..+++||+|
T Consensus 187 -----i-~~l~~L~~L~~L 199 (199)
T d2omxa2 187 -----I-SVLAKLTNLESL 199 (199)
T ss_dssp -----C-GGGGGCTTCSEE
T ss_pred -----C-ccccCCCCCCcC
Confidence 1 236788999886
No 13
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=97.24 E-value=1.8e-05 Score=76.35 Aligned_cols=268 Identities=15% Similarity=0.046 Sum_probs=126.1
Q ss_pred ChhhHHHHHHHHhc-cCcEEEEEEecCCCcceeeecccccccccCCccCcCCcEEEEeeEEEC---h------hhHHHHH
Q 010478 197 HESEITNWVYSALS-KRVQIFELELWPRLKNYTFLENCYNNLKSELSGVKYLRSLRLFSVNVT---G------EILEFIL 266 (509)
Q Consensus 197 ~~~~~~~wl~~a~~-~~v~~L~L~~~~~~~~~~~p~~~~~~L~~~~~~~p~Lk~L~L~~v~~~---~------~~l~~ll 266 (509)
....+..++..... ..+++|+|+... +....+..|.......++|+.|++.++... + ..+...+
T Consensus 16 ~~e~~~~l~~~L~~~~~l~~L~Ls~n~------i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l 89 (344)
T d2ca6a1 16 TTEDEKSVFAVLLEDDSVKEIVLSGNT------IGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQAL 89 (344)
T ss_dssp CSHHHHTTSHHHHHCSCCCEEECTTSE------ECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEECcCCc------CCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHH
Confidence 33455555555443 467777664211 110001111112445678888888765422 1 1244556
Q ss_pred hCCccccceeeeccccee----eE-EEecccccceEEEEecccCccEEEE--ECCceeEEEEecCCccceeeecCCCCce
Q 010478 267 HNCPLLDQLSVVRSETLV----SL-KVVGSAIQLKHLRISTCYRLNEIKI--STPNLLSFKYFGPGQELKLHIENAPQLV 339 (509)
Q Consensus 267 s~CP~Le~L~L~~c~~~~----~l-~i~~~~~~Lk~L~l~~c~~l~~l~i--~aP~L~~L~~~g~~~~~~~~~~~~~~L~ 339 (509)
..|+.|++|+|.+|..-. .+ ..-..+++|++|.+.+|.. ..... -+..|..+. ........+.|+
T Consensus 90 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l-~~~~~~~l~~~l~~~~-------~~~~~~~~~~L~ 161 (344)
T d2ca6a1 90 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGL-GPQAGAKIARALQELA-------VNKKAKNAPPLR 161 (344)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCC-HHHHHHHHHHHHHHHH-------HHHHHHTCCCCC
T ss_pred hhCCCcccccccccccccccccchhhhhcccccchheecccccc-cccccccccccccccc-------cccccccCcccc
Confidence 678888888887764211 01 0111235677777766541 10000 000000000 000112334455
Q ss_pred EEEEEecc-chhhhhhhcccccCCCCccEEEEeechh----hhhcc-C-CCCCCcccEEEEEeeccCccCHHHHHHHhhc
Q 010478 340 DISFRGVM-LTRVRNVVGPITSCFPQLKTLELDSCDE----LYAQF-S-EHELPNLTHLHLRVATLNRESLLGLASIMKA 412 (509)
Q Consensus 340 ~l~i~~~~-~~~~~~~~~~l~~~l~~L~~L~L~~~~~----~~~~~-~-~~~f~~Lk~L~L~~~~~~~~~~~~l~~lL~~ 412 (509)
.+.+.... .+.....+...+..++.++.|.+..+.- +...+ . ...+++|++|+|..+..+......+...+..
T Consensus 162 ~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~ 241 (344)
T d2ca6a1 162 SIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 241 (344)
T ss_dssp EEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred eeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccc
Confidence 44444311 1111112334445667888888874321 11111 2 5677888888885443222333446677888
Q ss_pred CCCCcEEEEEEeecCCc-cCCc-cccCccccCCccEEEEecccCCc-cHHHHHHHHHhcCccCCcEEEE
Q 010478 413 CPFLQTLIVQFDYNGYK-VGRR-RKVPRHSHQHLKLVELHGFLGRP-IDLELAFYILENAMTLEKMVVN 478 (509)
Q Consensus 413 ~P~Le~L~i~~~~~~~~-~~~~-~~~p~c~~~~Lk~V~i~~f~g~~-~e~~l~~~lL~na~~Le~m~I~ 478 (509)
+|+|+.|.+....-... ...+ ..+..+....|+++.|.+-.-.. .-..+++.+..+.+.|+++.+.
T Consensus 242 ~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~ 310 (344)
T d2ca6a1 242 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELN 310 (344)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECT
T ss_pred cccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECC
Confidence 88888888754310000 0000 01112334668888887643222 2234555555577888877764
No 14
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=97.18 E-value=5.4e-05 Score=68.27 Aligned_cols=143 Identities=15% Similarity=0.134 Sum_probs=76.5
Q ss_pred CccCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeEEEecccccceEEEEecccCccEEE-EECCceeEE
Q 010478 241 LSGVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSLKVVGSAIQLKHLRISTCYRLNEIK-ISTPNLLSF 319 (509)
Q Consensus 241 ~~~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l~i~~~~~~Lk~L~l~~c~~l~~l~-i~aP~L~~L 319 (509)
+..+++|+.|.+.+..+++- . -+.+++.|+.|.+.+|.......+ ...+.++.+.+..+....... ...++|+.|
T Consensus 81 l~~l~~l~~l~~~~n~~~~i--~-~l~~l~~L~~l~l~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L 156 (227)
T d1h6ua2 81 LKNLTKITELELSGNPLKNV--S-AIAGLQSIKTLDLTSTQITDVTPL-AGLSNLQVLYLDLNQITNISPLAGLTNLQYL 156 (227)
T ss_dssp GTTCCSCCEEECCSCCCSCC--G-GGTTCTTCCEEECTTSCCCCCGGG-TTCTTCCEEECCSSCCCCCGGGGGCTTCCEE
T ss_pred cccccccccccccccccccc--c-cccccccccccccccccccccchh-ccccchhhhhchhhhhchhhhhccccccccc
Confidence 56789999999988766542 2 256899999999988864321111 123566666665554111000 123445555
Q ss_pred EEecCCccceeeecCCCCceEEEEEeccchhhhhhhcccccCCCCccEEEEeechhhhhccC-CCCCCcccEEEEEeecc
Q 010478 320 KYFGPGQELKLHIENAPQLVDISFRGVMLTRVRNVVGPITSCFPQLKTLELDSCDELYAQFS-EHELPNLTHLHLRVATL 398 (509)
Q Consensus 320 ~~~g~~~~~~~~~~~~~~L~~l~i~~~~~~~~~~~~~~l~~~l~~L~~L~L~~~~~~~~~~~-~~~f~~Lk~L~L~~~~~ 398 (509)
.+.+..-..... +..+++|+.|+++.+ .+.. ++ +..+++|++|+|..+..
T Consensus 157 ~l~~n~~~~~~~---------------------------l~~l~~L~~L~Ls~n-~l~~-l~~l~~l~~L~~L~Ls~N~l 207 (227)
T d1h6ua2 157 SIGNAQVSDLTP---------------------------LANLSKLTTLKADDN-KISD-ISPLASLPNLIEVHLKNNQI 207 (227)
T ss_dssp ECCSSCCCCCGG---------------------------GTTCTTCCEEECCSS-CCCC-CGGGGGCTTCCEEECTTSCC
T ss_pred cccccccccchh---------------------------hcccccceecccCCC-ccCC-ChhhcCCCCCCEEECcCCcC
Confidence 444433100011 245666777776643 2211 22 45566777777743321
Q ss_pred CccCHHHHHHHhhcCCCCcEEEEE
Q 010478 399 NRESLLGLASIMKACPFLQTLIVQ 422 (509)
Q Consensus 399 ~~~~~~~l~~lL~~~P~Le~L~i~ 422 (509)
.. +. -++.+++|+.|+|.
T Consensus 208 t~-----i~-~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 208 SD-----VS-PLANTSNLFIVTLT 225 (227)
T ss_dssp CB-----CG-GGTTCTTCCEEEEE
T ss_pred CC-----Cc-ccccCCCCCEEEee
Confidence 11 11 25677777777764
No 15
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=97.07 E-value=0.00011 Score=71.10 Aligned_cols=186 Identities=13% Similarity=0.127 Sum_probs=98.8
Q ss_pred CccCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeEEEecccccceEEEEecccCccEEE-E-ECCceeE
Q 010478 241 LSGVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSLKVVGSAIQLKHLRISTCYRLNEIK-I-STPNLLS 318 (509)
Q Consensus 241 ~~~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l~i~~~~~~Lk~L~l~~c~~l~~l~-i-~aP~L~~ 318 (509)
...+++++.|.+++..+++-. -...++.|++|.+.++.. +.+..-..+++|+.|.+.++. +..+. + ..|+|++
T Consensus 193 ~~~l~~~~~l~l~~n~i~~~~---~~~~~~~L~~L~l~~n~l-~~~~~l~~l~~L~~L~l~~n~-l~~~~~~~~~~~L~~ 267 (384)
T d2omza2 193 LAKLTNLESLIATNNQISDIT---PLGILTNLDELSLNGNQL-KDIGTLASLTNLTDLDLANNQ-ISNLAPLSGLTKLTE 267 (384)
T ss_dssp GGGCTTCSEEECCSSCCCCCG---GGGGCTTCCEEECCSSCC-CCCGGGGGCTTCSEEECCSSC-CCCCGGGTTCTTCSE
T ss_pred cccccccceeeccCCccCCCC---cccccCCCCEEECCCCCC-CCcchhhcccccchhccccCc-cCCCCcccccccCCE
Confidence 456788888888876655421 135578888888887742 222111234678888877765 22221 1 2567777
Q ss_pred EEEecCCccceeeecCCCCceEEEEEeccchhhhhhhcccccCCCCccEEEEeechhhhhccCCCCCCcccEEEEEeecc
Q 010478 319 FKYFGPGQELKLHIENAPQLVDISFRGVMLTRVRNVVGPITSCFPQLKTLELDSCDELYAQFSEHELPNLTHLHLRVATL 398 (509)
Q Consensus 319 L~~~g~~~~~~~~~~~~~~L~~l~i~~~~~~~~~~~~~~l~~~l~~L~~L~L~~~~~~~~~~~~~~f~~Lk~L~L~~~~~ 398 (509)
|.+++..-.....+...+.++.+.+........ .-...+++++.|.++.+ .+....++..+++|++|++..+.-
T Consensus 268 L~l~~~~l~~~~~~~~~~~l~~l~~~~n~l~~~-----~~~~~~~~l~~L~ls~n-~l~~l~~l~~l~~L~~L~L~~n~l 341 (384)
T d2omza2 268 LKLGANQISNISPLAGLTALTNLELNENQLEDI-----SPISNLKNLTYLTLYFN-NISDISPVSSLTKLQRLFFANNKV 341 (384)
T ss_dssp EECCSSCCCCCGGGTTCTTCSEEECCSSCCSCC-----GGGGGCTTCSEEECCSS-CCSCCGGGGGCTTCCEEECCSSCC
T ss_pred eeccCcccCCCCccccccccccccccccccccc-----cccchhcccCeEECCCC-CCCCCcccccCCCCCEEECCCCCC
Confidence 777655411111234455555555443111100 11345677777777633 222222256677888888744321
Q ss_pred CccCHHHHHHHhhcCCCCcEEEEEEeecCCccCCccccC-ccccCCccEEEEe
Q 010478 399 NRESLLGLASIMKACPFLQTLIVQFDYNGYKVGRRRKVP-RHSHQHLKLVELH 450 (509)
Q Consensus 399 ~~~~~~~l~~lL~~~P~Le~L~i~~~~~~~~~~~~~~~p-~c~~~~Lk~V~i~ 450 (509)
.. +. -+..+|+|+.|++... .+..++ -..+.+|+.+.|.
T Consensus 342 ~~-----l~-~l~~l~~L~~L~l~~N-------~l~~l~~l~~l~~L~~L~L~ 381 (384)
T d2omza2 342 SD-----VS-SLANLTNINWLSAGHN-------QISDLTPLANLTRITQLGLN 381 (384)
T ss_dssp CC-----CG-GGGGCTTCCEEECCSS-------CCCBCGGGTTCTTCSEEECC
T ss_pred CC-----Ch-hHcCCCCCCEEECCCC-------cCCCChhhccCCCCCEeeCC
Confidence 11 11 2566788888877652 222222 1234567766654
No 16
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=97.02 E-value=8.2e-05 Score=72.09 Aligned_cols=164 Identities=15% Similarity=0.154 Sum_probs=102.8
Q ss_pred CccCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeEEEecccccceEEEEecccCccEEE--EECCceeE
Q 010478 241 LSGVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSLKVVGSAIQLKHLRISTCYRLNEIK--ISTPNLLS 318 (509)
Q Consensus 241 ~~~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l~i~~~~~~Lk~L~l~~c~~l~~l~--i~aP~L~~ 318 (509)
....++|++|++.+..+++-. .+..++.|+.|.+.++... .+.--..+++|+.|.+.++. +..+. ...+.++.
T Consensus 215 ~~~~~~L~~L~l~~n~l~~~~---~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~L~~L~l~~~~-l~~~~~~~~~~~l~~ 289 (384)
T d2omza2 215 LGILTNLDELSLNGNQLKDIG---TLASLTNLTDLDLANNQIS-NLAPLSGLTKLTELKLGANQ-ISNISPLAGLTALTN 289 (384)
T ss_dssp GGGCTTCCEEECCSSCCCCCG---GGGGCTTCSEEECCSSCCC-CCGGGTTCTTCSEEECCSSC-CCCCGGGTTCTTCSE
T ss_pred ccccCCCCEEECCCCCCCCcc---hhhcccccchhccccCccC-CCCcccccccCCEeeccCcc-cCCCCcccccccccc
Confidence 456789999999888776532 2567899999999887532 21112335788999887665 22211 12456666
Q ss_pred EEEecCCccceeeecCCCCceEEEEEeccchhhhhhhcccccCCCCccEEEEeechhhhhccC-CCCCCcccEEEEEeec
Q 010478 319 FKYFGPGQELKLHIENAPQLVDISFRGVMLTRVRNVVGPITSCFPQLKTLELDSCDELYAQFS-EHELPNLTHLHLRVAT 397 (509)
Q Consensus 319 L~~~g~~~~~~~~~~~~~~L~~l~i~~~~~~~~~~~~~~l~~~l~~L~~L~L~~~~~~~~~~~-~~~f~~Lk~L~L~~~~ 397 (509)
+...+..-.....+..+++++.+++......... -+..+++|++|.++.+. + ..++ +..+++|++|++..+.
T Consensus 290 l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~~l~-----~l~~l~~L~~L~L~~n~-l-~~l~~l~~l~~L~~L~l~~N~ 362 (384)
T d2omza2 290 LELNENQLEDISPISNLKNLTYLTLYFNNISDIS-----PVSSLTKLQRLFFANNK-V-SDVSSLANLTNINWLSAGHNQ 362 (384)
T ss_dssp EECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCG-----GGGGCTTCCEEECCSSC-C-CCCGGGGGCTTCCEEECCSSC
T ss_pred ccccccccccccccchhcccCeEECCCCCCCCCc-----ccccCCCCCEEECCCCC-C-CCChhHcCCCCCCEEECCCCc
Confidence 6665544111223566788888877763221111 13678999999998653 3 2233 6678899999995542
Q ss_pred cCccCHHHHHHHhhcCCCCcEEEEE
Q 010478 398 LNRESLLGLASIMKACPFLQTLIVQ 422 (509)
Q Consensus 398 ~~~~~~~~l~~lL~~~P~Le~L~i~ 422 (509)
-. + +.. +..+|+|+.|+|+
T Consensus 363 l~--~---l~~-l~~l~~L~~L~L~ 381 (384)
T d2omza2 363 IS--D---LTP-LANLTRITQLGLN 381 (384)
T ss_dssp CC--B---CGG-GTTCTTCSEEECC
T ss_pred CC--C---Chh-hccCCCCCEeeCC
Confidence 22 1 222 6789999999885
No 17
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.94 E-value=8.8e-05 Score=63.31 Aligned_cols=38 Identities=16% Similarity=0.130 Sum_probs=23.3
Q ss_pred ccCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeeccc
Q 010478 242 SGVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSE 281 (509)
Q Consensus 242 ~~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~ 281 (509)
.....|+.|+|++..++. +..+...++.|+.|+|+++.
T Consensus 15 ~n~~~lr~L~L~~n~I~~--i~~~~~~l~~L~~L~Ls~N~ 52 (162)
T d1a9na_ 15 TNAVRDRELDLRGYKIPV--IENLGATLDQFDAIDFSDNE 52 (162)
T ss_dssp ECTTSCEEEECTTSCCCS--CCCGGGGTTCCSEEECCSSC
T ss_pred cCcCcCcEEECCCCCCCc--cCccccccccCCEEECCCCC
Confidence 345567777777766543 12334566777777777763
No 18
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.87 E-value=0.00097 Score=60.00 Aligned_cols=195 Identities=13% Similarity=0.126 Sum_probs=99.6
Q ss_pred CcCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeEEE--ecccccceEEEEecccCccEEE----EECCcee
Q 010478 244 VKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSLKV--VGSAIQLKHLRISTCYRLNEIK----ISTPNLL 317 (509)
Q Consensus 244 ~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l~i--~~~~~~Lk~L~l~~c~~l~~l~----i~aP~L~ 317 (509)
++++++|+|++..++.-. ...+.++++|++|+|.++.....+.. -..++.++.|.+..+.++..+. -..|+|+
T Consensus 28 ~~~l~~L~Ls~n~i~~l~-~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~ 106 (242)
T d1xwdc1 28 PRNAIELRFVLTKLRVIQ-KGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQ 106 (242)
T ss_dssp CSCCSEEEEESCCCCEEC-TTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCC
T ss_pred CCCCCEEECcCCcCCccC-hhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccccccccc
Confidence 357999999876554210 11257789999999988865432211 1234788888888776655443 3478999
Q ss_pred EEEEecCCccceeeecCCCCceEEEEEeccchhhhhhhcccccCC-CCccEEEEeechhhhhccCCCCC--CcccEEEEE
Q 010478 318 SFKYFGPGQELKLHIENAPQLVDISFRGVMLTRVRNVVGPITSCF-PQLKTLELDSCDELYAQFSEHEL--PNLTHLHLR 394 (509)
Q Consensus 318 ~L~~~g~~~~~~~~~~~~~~L~~l~i~~~~~~~~~~~~~~l~~~l-~~L~~L~L~~~~~~~~~~~~~~f--~~Lk~L~L~ 394 (509)
.+.+.+..-...-......++..+.+...........-...+.++ ..++.|.+.. ..+ ..++...| .+++++..
T Consensus 107 ~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~-n~l-~~i~~~~~~~~~l~~~~~- 183 (242)
T d1xwdc1 107 YLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNK-NGI-QEIHNCAFNGTQLDELNL- 183 (242)
T ss_dssp EEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCS-SCC-CEECTTTTTTCCEEEEEC-
T ss_pred ccccchhhhcccccccccccccccccccccccccccccccccccccccceeeeccc-ccc-cccccccccchhhhcccc-
Confidence 999887652111123334455555544311111111111111222 3566676652 222 11221223 33333332
Q ss_pred eeccCccCHHHH-HHHhhcCCCCcEEEEEEeecCCccCCccccCccccCCccEEEEecc
Q 010478 395 VATLNRESLLGL-ASIMKACPFLQTLIVQFDYNGYKVGRRRKVPRHSHQHLKLVELHGF 452 (509)
Q Consensus 395 ~~~~~~~~~~~l-~~lL~~~P~Le~L~i~~~~~~~~~~~~~~~p~c~~~~Lk~V~i~~f 452 (509)
... .....+ ...++.+|+|+.|++.. ..+..+|...+.+|+.++..+.
T Consensus 184 -l~~--n~l~~l~~~~f~~l~~L~~L~Ls~-------N~l~~l~~~~~~~l~~L~~l~~ 232 (242)
T d1xwdc1 184 -SDN--NNLEELPNDVFHGASGPVILDISR-------TRIHSLPSYGLENLKKLRARST 232 (242)
T ss_dssp -TTC--TTCCCCCTTTTTTSCCCSEEECTT-------SCCCCCCSSSCTTCCEEESSSE
T ss_pred -ccc--cccccccHHHhcCCCCCCEEECCC-------CcCCccCHHHHcCCcccccCcC
Confidence 111 111112 23467889999998854 2234445445566666655443
No 19
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.74 E-value=0.00014 Score=61.94 Aligned_cols=37 Identities=11% Similarity=0.099 Sum_probs=20.1
Q ss_pred ccCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeeccc
Q 010478 242 SGVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSE 281 (509)
Q Consensus 242 ~~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~ 281 (509)
..++.|+.|+|++-.+.. +. -++++|.|+.|+++++.
T Consensus 38 ~~l~~L~~L~Ls~N~i~~--l~-~~~~l~~L~~L~ls~N~ 74 (162)
T d1a9na_ 38 ATLDQFDAIDFSDNEIRK--LD-GFPLLRRLKTLLVNNNR 74 (162)
T ss_dssp GGTTCCSEEECCSSCCCE--EC-CCCCCSSCCEEECCSSC
T ss_pred cccccCCEEECCCCCCCc--cC-CcccCcchhhhhccccc
Confidence 345666666666554432 11 13456666666666654
No 20
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.62 E-value=0.00024 Score=65.48 Aligned_cols=163 Identities=15% Similarity=0.073 Sum_probs=87.1
Q ss_pred CCccCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeEEEecccccceEEEEecccCccEEE----EECCc
Q 010478 240 ELSGVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSLKVVGSAIQLKHLRISTCYRLNEIK----ISTPN 315 (509)
Q Consensus 240 ~~~~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l~i~~~~~~Lk~L~l~~c~~l~~l~----i~aP~ 315 (509)
.+..+++|++|+|++..++.-. ..+..+.|+.|+|+++.--.........++|+.|.+.++.. ..+. -..++
T Consensus 50 ~f~~l~~L~~L~L~~N~l~~l~---~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~~~~-~~~~~~~~~~l~~ 125 (266)
T d1p9ag_ 50 TLMPYTRLTQLNLDRAELTKLQ---VDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRL-TSLPLGALRGLGE 125 (266)
T ss_dssp GGTTCTTCCEEECTTSCCCEEE---CCSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCC-CCCCSSTTTTCTT
T ss_pred Hhhccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccc-ceeeccccccccc
Confidence 3567888999999876655311 12468889999998875322222233457788888877652 2111 12355
Q ss_pred eeEEEEecCCc-c-ceeeecCCCCceEEEEEeccchhhhhhhcccccCCCCccEEEEeechhhhhccC--CCCCCcccEE
Q 010478 316 LLSFKYFGPGQ-E-LKLHIENAPQLVDISFRGVMLTRVRNVVGPITSCFPQLKTLELDSCDELYAQFS--EHELPNLTHL 391 (509)
Q Consensus 316 L~~L~~~g~~~-~-~~~~~~~~~~L~~l~i~~~~~~~~~~~~~~l~~~l~~L~~L~L~~~~~~~~~~~--~~~f~~Lk~L 391 (509)
++.|.+.+..- . ....+...+.++.+++..... .......+..+++|++|+|+... + ..+| ...+++|++|
T Consensus 126 l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l---~~~~~~~~~~l~~L~~L~Ls~N~-L-~~lp~~~~~~~~L~~L 200 (266)
T d1p9ag_ 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL---TELPAGLLNGLENLDTLLLQENS-L-YTIPKGFFGSHLLPFA 200 (266)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC---SCCCTTTTTTCTTCCEEECCSSC-C-CCCCTTTTTTCCCSEE
T ss_pred cccccccccccceeccccccccccchhcccccccc---cccCccccccccccceeecccCC-C-cccChhHCCCCCCCEE
Confidence 66666655431 0 111234456666666554211 11112334566777777776332 2 2333 4456677777
Q ss_pred EEEeeccC-ccCHHHHHHHhh
Q 010478 392 HLRVATLN-RESLLGLASIMK 411 (509)
Q Consensus 392 ~L~~~~~~-~~~~~~l~~lL~ 411 (509)
.|..+... +....++..+++
T Consensus 201 ~L~~Np~~CdC~~~~l~~wl~ 221 (266)
T d1p9ag_ 201 FLHGNPWLCNCEILYFRRWLQ 221 (266)
T ss_dssp ECCSCCBCCSGGGHHHHHHHH
T ss_pred EecCCCCCCCcchHHHHHHHH
Confidence 77554211 233445555554
No 21
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=96.53 E-value=0.00011 Score=70.63 Aligned_cols=193 Identities=18% Similarity=0.121 Sum_probs=97.4
Q ss_pred ccCcCCcEEEEeeEEEChhh---HHHHHhCCccccceeeeccccee-e-EEEe------------cccccceEEEEeccc
Q 010478 242 SGVKYLRSLRLFSVNVTGEI---LEFILHNCPLLDQLSVVRSETLV-S-LKVV------------GSAIQLKHLRISTCY 304 (509)
Q Consensus 242 ~~~p~Lk~L~L~~v~~~~~~---l~~lls~CP~Le~L~L~~c~~~~-~-l~i~------------~~~~~Lk~L~l~~c~ 304 (509)
..+++|+.|+|++..+++.. +...+..++.|++|.+.+|..-. . ..+. ...+.|+.|.+.+..
T Consensus 90 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~ 169 (344)
T d2ca6a1 90 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 169 (344)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeeccccc
Confidence 45788999999988887754 55566779999999998874210 0 0000 011344444443321
Q ss_pred CccEEEEECCceeEEEEecCCccceeeecCCCCceEEEEEecc--chhhhhhhcccccCCCCccEEEEeechh----hhh
Q 010478 305 RLNEIKISTPNLLSFKYFGPGQELKLHIENAPQLVDISFRGVM--LTRVRNVVGPITSCFPQLKTLELDSCDE----LYA 378 (509)
Q Consensus 305 ~l~~l~i~aP~L~~L~~~g~~~~~~~~~~~~~~L~~l~i~~~~--~~~~~~~~~~l~~~l~~L~~L~L~~~~~----~~~ 378 (509)
+..- + .......+...+.|+++++.... .......+...+..+++|+.|.|+.+.- ...
T Consensus 170 -i~~~-------------~-~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~ 234 (344)
T d2ca6a1 170 -LENG-------------S-MKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSA 234 (344)
T ss_dssp -CTGG-------------G-HHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHH
T ss_pred -cccc-------------c-cccccchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccccccccccc
Confidence 0000 0 00000112334556666655421 1112233445566778888888874321 011
Q ss_pred ccC-CCCCCcccEEEEEeeccCccCHHHHHHHhhcC--CCCcEEEEEEeecCCccCCccccCcc---ccCCccEEEEec
Q 010478 379 QFS-EHELPNLTHLHLRVATLNRESLLGLASIMKAC--PFLQTLIVQFDYNGYKVGRRRKVPRH---SHQHLKLVELHG 451 (509)
Q Consensus 379 ~~~-~~~f~~Lk~L~L~~~~~~~~~~~~l~~lL~~~--P~Le~L~i~~~~~~~~~~~~~~~p~c---~~~~Lk~V~i~~ 451 (509)
... ...+++|++|+|..+.-+..+...+...+..+ +.|++|+++... ........+..+ ....|+.+.+.|
T Consensus 235 L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~--i~~~~~~~l~~~l~~~~~~L~~L~l~~ 311 (344)
T d2ca6a1 235 LAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNE--IELDAVRTLKTVIDEKMPDLLFLELNG 311 (344)
T ss_dssp HHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSC--CBHHHHHHHHHHHHHHCTTCCEEECTT
T ss_pred ccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCc--CChHHHHHHHHHHHccCCCCCEEECCC
Confidence 111 56778888888854432223333444555443 568888776531 000000111111 235688888876
No 22
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=96.33 E-value=0.00055 Score=64.43 Aligned_cols=62 Identities=18% Similarity=0.234 Sum_probs=30.5
Q ss_pred CccCcCCcEEEEeeE-EEChhhHHHHHhCCccccceeeecccceeeE-EEecccccceEEEEecc
Q 010478 241 LSGVKYLRSLRLFSV-NVTGEILEFILHNCPLLDQLSVVRSETLVSL-KVVGSAIQLKHLRISTC 303 (509)
Q Consensus 241 ~~~~p~Lk~L~L~~v-~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l-~i~~~~~~Lk~L~l~~c 303 (509)
+..+++|++|+|++. .+.+. +..-++++++|+.|+|+++...... .......+|+.+.+..+
T Consensus 72 l~~L~~L~~L~Ls~~N~l~g~-iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N 135 (313)
T d1ogqa_ 72 LANLPYLNFLYIGGINNLVGP-IPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYN 135 (313)
T ss_dssp GGGCTTCSEEEEEEETTEESC-CCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSS
T ss_pred HhcCccccccccccccccccc-cccccccccccchhhhccccccccccccccchhhhcccccccc
Confidence 456677777777653 22211 1122456677777777766422110 01112345666665544
No 23
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.08 E-value=0.00062 Score=63.16 Aligned_cols=190 Identities=13% Similarity=0.088 Sum_probs=92.6
Q ss_pred cCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeEE--EecccccceEEEEecccCccEEEE----ECCceeE
Q 010478 245 KYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSLK--VVGSAIQLKHLRISTCYRLNEIKI----STPNLLS 318 (509)
Q Consensus 245 p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l~--i~~~~~~Lk~L~l~~c~~l~~l~i----~aP~L~~ 318 (509)
+++++|+|++-.++.-. ...+.+++.|+.|++++..- ..+. ....+..++.+.+.....+..+.- ..++|++
T Consensus 32 ~~~~~L~Ls~N~i~~i~-~~~f~~l~~L~~L~ls~n~l-~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~ 109 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVP-AASFRACRNLTILWLHSNVL-ARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHT 109 (284)
T ss_dssp TTCSEEECTTSCCCEEC-TTTTTTCTTCCEEECCSSCC-CEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCE
T ss_pred CCCCEEECcCCcCCCCC-HHHhhccccccccccccccc-cccccccccccccccccccccccccccccchhhcccccCCE
Confidence 35666766655443211 01245566677777665431 1110 011124455554443333332211 2356666
Q ss_pred EEEecCCcc--ceeeecCCCCceEEEEEeccchhhhhhhcccccCCCCccEEEEeechhhhhccC--CCCCCcccEEEEE
Q 010478 319 FKYFGPGQE--LKLHIENAPQLVDISFRGVMLTRVRNVVGPITSCFPQLKTLELDSCDELYAQFS--EHELPNLTHLHLR 394 (509)
Q Consensus 319 L~~~g~~~~--~~~~~~~~~~L~~l~i~~~~~~~~~~~~~~l~~~l~~L~~L~L~~~~~~~~~~~--~~~f~~Lk~L~L~ 394 (509)
|.+.+.... ....+...++|+.+++....- ...-...+..++++++|.+..+ .+....+ +..+++|++|.+.
T Consensus 110 L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l---~~i~~~~f~~~~~L~~L~l~~N-~l~~l~~~~f~~l~~L~~l~l~ 185 (284)
T d1ozna_ 110 LHLDRCGLQELGPGLFRGLAALQYLYLQDNAL---QALPDDTFRDLGNLTHLFLHGN-RISSVPERAFRGLHSLDRLLLH 185 (284)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCC---CCCCTTTTTTCTTCCEEECCSS-CCCEECTTTTTTCTTCCEEECC
T ss_pred EecCCcccccccccccchhcccchhhhccccc---cccChhHhccccchhhcccccC-cccccchhhhccccccchhhhh
Confidence 666554410 112344456677766665211 1111233456678888888743 2322222 5567778888874
Q ss_pred eeccCccCHHHHHHHhhcCCCCcEEEEEEeecCCccCCccccCc---cccCCccEEEEec
Q 010478 395 VATLNRESLLGLASIMKACPFLQTLIVQFDYNGYKVGRRRKVPR---HSHQHLKLVELHG 451 (509)
Q Consensus 395 ~~~~~~~~~~~l~~lL~~~P~Le~L~i~~~~~~~~~~~~~~~p~---c~~~~Lk~V~i~~ 451 (509)
.+...... ...+..+++|+.|++... ....++. ....+|+.+.+.|
T Consensus 186 ~N~l~~i~----~~~f~~l~~L~~L~l~~N-------~i~~~~~~~~~~~~~L~~L~l~~ 234 (284)
T d1ozna_ 186 QNRVAHVH----PHAFRDLGRLMTLYLFAN-------NLSALPTEALAPLRALQYLRLND 234 (284)
T ss_dssp SSCCCEEC----TTTTTTCTTCCEEECCSS-------CCSCCCHHHHTTCTTCCEEECCS
T ss_pred hccccccC----hhHhhhhhhccccccccc-------ccccccccccccccccCEEEecC
Confidence 43222111 234577788888877652 1122221 1346788888876
No 24
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.86 E-value=0.001 Score=61.67 Aligned_cols=173 Identities=17% Similarity=0.129 Sum_probs=101.7
Q ss_pred CccCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeEEE--ecccccceEEEEecccCccEEE----EECC
Q 010478 241 LSGVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSLKV--VGSAIQLKHLRISTCYRLNEIK----ISTP 314 (509)
Q Consensus 241 ~~~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l~i--~~~~~~Lk~L~l~~c~~l~~l~----i~aP 314 (509)
+.++++|+.|++++..+..-. .....+++.+++|.+.....+..+.- -..+++|+.|.+.++.. ..+. -..+
T Consensus 52 f~~l~~L~~L~ls~n~l~~i~-~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~-~~~~~~~~~~~~ 129 (284)
T d1ozna_ 52 FRACRNLTILWLHSNVLARID-AAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGL-QELGPGLFRGLA 129 (284)
T ss_dssp TTTCTTCCEEECCSSCCCEEC-TTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCC-CCCCTTTTTTCT
T ss_pred hhccccccccccccccccccc-cccccccccccccccccccccccccchhhcccccCCEEecCCccc-ccccccccchhc
Confidence 567788888888766544321 11245577777777665554433211 12346788888877652 2111 1245
Q ss_pred ceeEEEEecCCc-cc-eeeecCCCCceEEEEEeccchhhhhhhcccccCCCCccEEEEeechhhhhccC--CCCCCcccE
Q 010478 315 NLLSFKYFGPGQ-EL-KLHIENAPQLVDISFRGVMLTRVRNVVGPITSCFPQLKTLELDSCDELYAQFS--EHELPNLTH 390 (509)
Q Consensus 315 ~L~~L~~~g~~~-~~-~~~~~~~~~L~~l~i~~~~~~~~~~~~~~l~~~l~~L~~L~L~~~~~~~~~~~--~~~f~~Lk~ 390 (509)
+|+.+.+.+..- .. .-.+...++|+.+++....- .......+.++++|+.|.+..+. +....+ +..+++|++
T Consensus 130 ~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l---~~l~~~~f~~l~~L~~l~l~~N~-l~~i~~~~f~~l~~L~~ 205 (284)
T d1ozna_ 130 ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI---SSVPERAFRGLHSLDRLLLHQNR-VAHVHPHAFRDLGRLMT 205 (284)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC---CEECTTTTTTCTTCCEEECCSSC-CCEECTTTTTTCTTCCE
T ss_pred ccchhhhccccccccChhHhccccchhhcccccCcc---cccchhhhccccccchhhhhhcc-ccccChhHhhhhhhccc
Confidence 677777766541 11 12355677888888776221 11222445678899999987432 222223 677789999
Q ss_pred EEEEeeccCccCHHHHHHHhhcCCCCcEEEEEE
Q 010478 391 LHLRVATLNRESLLGLASIMKACPFLQTLIVQF 423 (509)
Q Consensus 391 L~L~~~~~~~~~~~~l~~lL~~~P~Le~L~i~~ 423 (509)
|++..+...... ...+..+++|+.|.++.
T Consensus 206 L~l~~N~i~~~~----~~~~~~~~~L~~L~l~~ 234 (284)
T d1ozna_ 206 LYLFANNLSALP----TEALAPLRALQYLRLND 234 (284)
T ss_dssp EECCSSCCSCCC----HHHHTTCTTCCEEECCS
T ss_pred cccccccccccc----ccccccccccCEEEecC
Confidence 998554332222 34577899999988865
No 25
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.19 E-value=0.0049 Score=60.08 Aligned_cols=37 Identities=8% Similarity=-0.017 Sum_probs=32.9
Q ss_pred cCCcEEEEeeEEEChhhHHHHHhCCccccceeeeccc
Q 010478 245 KYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSE 281 (509)
Q Consensus 245 p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~ 281 (509)
++|++|++++-.+++.++.+++..++.|+.|+|.+|.
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~ 38 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCG 38 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSC
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCC
Confidence 4689999999999999999999999999999999984
No 26
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=95.11 E-value=0.0024 Score=54.23 Aligned_cols=67 Identities=10% Similarity=0.089 Sum_probs=39.2
Q ss_pred ccccCCCCccEEEEeechh----hhhccC-CCCCCcccEEEEEeeccCccC---HHHHHHHhhcCCCCcEEEEEE
Q 010478 357 PITSCFPQLKTLELDSCDE----LYAQFS-EHELPNLTHLHLRVATLNRES---LLGLASIMKACPFLQTLIVQF 423 (509)
Q Consensus 357 ~l~~~l~~L~~L~L~~~~~----~~~~~~-~~~f~~Lk~L~L~~~~~~~~~---~~~l~~lL~~~P~Le~L~i~~ 423 (509)
..+...+.|++|.|+.+.- +..... ...-+.|++|+|........+ ...++..++..+.|++|.+++
T Consensus 66 ~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~ 140 (167)
T d1pgva_ 66 ELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISF 140 (167)
T ss_dssp HHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCC
T ss_pred hhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcC
Confidence 3344566788888874421 111111 556677888888543222222 344777788888888887755
No 27
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=94.43 E-value=0.00081 Score=59.03 Aligned_cols=38 Identities=29% Similarity=0.206 Sum_probs=27.0
Q ss_pred CccCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeeccc
Q 010478 241 LSGVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSE 281 (509)
Q Consensus 241 ~~~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~ 281 (509)
+..+++|+.|+|++..+++- . -+.++++|+.|+|+++.
T Consensus 44 l~~L~~L~~L~Ls~n~I~~i--~-~l~~l~~L~~L~Ls~N~ 81 (198)
T d1m9la_ 44 LSTLKACKHLALSTNNIEKI--S-SLSGMENLRILSLGRNL 81 (198)
T ss_dssp HHHTTTCCEEECSEEEESCC--C-CHHHHTTCCEEECCEEE
T ss_pred HhcccccceeECcccCCCCc--c-cccCCccccChhhcccc
Confidence 45678888888888877652 1 14567888888888774
No 28
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=94.39 E-value=0.0079 Score=55.79 Aligned_cols=167 Identities=16% Similarity=0.170 Sum_probs=78.3
Q ss_pred CccCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeEEEecccccceEEEEecccCccEEE---E-ECCce
Q 010478 241 LSGVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSLKVVGSAIQLKHLRISTCYRLNEIK---I-STPNL 316 (509)
Q Consensus 241 ~~~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l~i~~~~~~Lk~L~l~~c~~l~~l~---i-~aP~L 316 (509)
+.++++|++|++.+..+..-. ...+.+++.|+.|++.++. ++.+.- .....|+.|.+.+.. +..+. . ..+.+
T Consensus 51 f~~l~~L~~L~l~~n~~~~i~-~~~f~~l~~L~~L~l~~n~-l~~l~~-~~~~~l~~L~~~~n~-l~~l~~~~~~~~~~~ 126 (305)
T d1xkua_ 51 FKNLKNLHTLILINNKISKIS-PGAFAPLVKLERLYLSKNQ-LKELPE-KMPKTLQELRVHENE-ITKVRKSVFNGLNQM 126 (305)
T ss_dssp TTTCTTCCEEECCSSCCCCBC-TTTTTTCTTCCEEECCSSC-CSBCCS-SCCTTCCEEECCSSC-CCBBCHHHHTTCTTC
T ss_pred hhccccccccccccccccccc-hhhhhCCCccCEecccCCc-cCcCcc-chhhhhhhhhccccc-hhhhhhhhhhccccc
Confidence 556778888888776654311 1225667888888887764 221110 112455666554432 11111 0 12233
Q ss_pred eEEEEecCCc----cceeeecCCCCceEEEEEeccchhhhhhhcccc-cCCCCccEEEEeechhhhhccC--CCCCCccc
Q 010478 317 LSFKYFGPGQ----ELKLHIENAPQLVDISFRGVMLTRVRNVVGPIT-SCFPQLKTLELDSCDELYAQFS--EHELPNLT 389 (509)
Q Consensus 317 ~~L~~~g~~~----~~~~~~~~~~~L~~l~i~~~~~~~~~~~~~~l~-~~l~~L~~L~L~~~~~~~~~~~--~~~f~~Lk 389 (509)
..+.+.+... .....+..+++|+.+.+..... ..+. ..+++++.|++..+... ...+ +..+++++
T Consensus 127 ~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l-------~~l~~~~~~~L~~L~l~~n~~~-~~~~~~~~~~~~l~ 198 (305)
T d1xkua_ 127 IVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI-------TTIPQGLPPSLTELHLDGNKIT-KVDAASLKGLNNLA 198 (305)
T ss_dssp CEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC-------CSCCSSCCTTCSEEECTTSCCC-EECTGGGTTCTTCC
T ss_pred cccccccccccccCCCccccccccccCccccccCCc-------cccCcccCCccCEEECCCCcCC-CCChhHhhcccccc
Confidence 3333332220 0111234455666665554211 1111 23467777777632211 1111 45566677
Q ss_pred EEEEEeeccCccCHHHHHHHhhcCCCCcEEEEEE
Q 010478 390 HLHLRVATLNRESLLGLASIMKACPFLQTLIVQF 423 (509)
Q Consensus 390 ~L~L~~~~~~~~~~~~l~~lL~~~P~Le~L~i~~ 423 (509)
.|++..+.-.... ...+..+|+|+.|+++.
T Consensus 199 ~L~~s~n~l~~~~----~~~~~~l~~L~~L~L~~ 228 (305)
T d1xkua_ 199 KLGLSFNSISAVD----NGSLANTPHLRELHLNN 228 (305)
T ss_dssp EEECCSSCCCEEC----TTTGGGSTTCCEEECCS
T ss_pred ccccccccccccc----cccccccccceeeeccc
Confidence 7776432211111 23445677777777755
No 29
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=94.12 E-value=0.0063 Score=56.49 Aligned_cols=171 Identities=16% Similarity=0.139 Sum_probs=99.7
Q ss_pred CcCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeE-EEecccccceEEEEecccCccEEEE-ECCceeEEEE
Q 010478 244 VKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSL-KVVGSAIQLKHLRISTCYRLNEIKI-STPNLLSFKY 321 (509)
Q Consensus 244 ~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l-~i~~~~~~Lk~L~l~~c~~l~~l~i-~aP~L~~L~~ 321 (509)
.++|+.|+|++..++.-. ...+.+++.|++|.+.++...... ..-..+++|+.|.+.++. ++.+.. ..+.++.+..
T Consensus 30 ~~~l~~L~Ls~N~i~~l~-~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~-l~~l~~~~~~~l~~L~~ 107 (305)
T d1xkua_ 30 PPDTALLDLQNNKITEIK-DGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ-LKELPEKMPKTLQELRV 107 (305)
T ss_dssp CTTCCEEECCSSCCCCBC-TTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC-CSBCCSSCCTTCCEEEC
T ss_pred CCCCCEEECcCCcCCCcC-hhHhhccccccccccccccccccchhhhhCCCccCEecccCCc-cCcCccchhhhhhhhhc
Confidence 478999999988765311 012567999999999998643211 011235789999998875 443322 2456777776
Q ss_pred ecCCcc--ceeeecCCCCceEEEEEeccchhhhhhhcccccCCCCccEEEEeechhhhhccCCCCCCcccEEEEEeeccC
Q 010478 322 FGPGQE--LKLHIENAPQLVDISFRGVMLTRVRNVVGPITSCFPQLKTLELDSCDELYAQFSEHELPNLTHLHLRVATLN 399 (509)
Q Consensus 322 ~g~~~~--~~~~~~~~~~L~~l~i~~~~~~~~~~~~~~l~~~l~~L~~L~L~~~~~~~~~~~~~~f~~Lk~L~L~~~~~~ 399 (509)
.+..-. ....+.....+..+.+...... ........+..+++++.+.+..+. + ..++...+++|++|++..+...
T Consensus 108 ~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~-~~~~~~~~~~~l~~L~~l~l~~n~-l-~~l~~~~~~~L~~L~l~~n~~~ 184 (305)
T d1xkua_ 108 HENEITKVRKSVFNGLNQMIVVELGTNPLK-SSGIENGAFQGMKKLSYIRIADTN-I-TTIPQGLPPSLTELHLDGNKIT 184 (305)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCC-GGGBCTTGGGGCTTCCEEECCSSC-C-CSCCSSCCTTCSEEECTTSCCC
T ss_pred cccchhhhhhhhhhcccccccccccccccc-ccCCCccccccccccCccccccCC-c-cccCcccCCccCEEECCCCcCC
Confidence 654310 1112334455555544432111 111122345677889999987432 2 2233445789999998543322
Q ss_pred ccCHHHHHHHhhcCCCCcEEEEEE
Q 010478 400 RESLLGLASIMKACPFLQTLIVQF 423 (509)
Q Consensus 400 ~~~~~~l~~lL~~~P~Le~L~i~~ 423 (509)
.. ....+..++.++.|.++.
T Consensus 185 ~~----~~~~~~~~~~l~~L~~s~ 204 (305)
T d1xkua_ 185 KV----DAASLKGLNNLAKLGLSF 204 (305)
T ss_dssp EE----CTGGGTTCTTCCEEECCS
T ss_pred CC----ChhHhhcccccccccccc
Confidence 11 234567889999998864
No 30
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=94.01 E-value=0.0035 Score=52.96 Aligned_cols=66 Identities=15% Similarity=0.167 Sum_probs=37.9
Q ss_pred cccCCCCccEEEEeechh----hhhccC-CCCCCcccEEEEEeecc--CccCHHHHHHHhhcCCCCcEEEEEE
Q 010478 358 ITSCFPQLKTLELDSCDE----LYAQFS-EHELPNLTHLHLRVATL--NRESLLGLASIMKACPFLQTLIVQF 423 (509)
Q Consensus 358 l~~~l~~L~~L~L~~~~~----~~~~~~-~~~f~~Lk~L~L~~~~~--~~~~~~~l~~lL~~~P~Le~L~i~~ 423 (509)
.+...+.++.|.+..+.- +..... ....++|+.++|..... +......++..++.++.|++|.+++
T Consensus 69 ~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~ 141 (166)
T d1io0a_ 69 MLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHF 141 (166)
T ss_dssp HHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCC
T ss_pred HHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcC
Confidence 334456677777764321 111111 45567788777744322 1233345777888899999988765
No 31
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=93.46 E-value=0.0036 Score=50.21 Aligned_cols=39 Identities=18% Similarity=0.140 Sum_probs=24.6
Q ss_pred CccCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeeccc
Q 010478 241 LSGVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSE 281 (509)
Q Consensus 241 ~~~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~ 281 (509)
+..+++|+.|+|++-.+++ +..-++.+++|+.|++++..
T Consensus 16 l~~l~~L~~L~ls~N~l~~--lp~~~~~l~~L~~L~l~~N~ 54 (124)
T d1dcea3 16 LEQLLLVTHLDLSHNRLRA--LPPALAALRCLEVLQASDNA 54 (124)
T ss_dssp GGGGTTCCEEECCSSCCCC--CCGGGGGCTTCCEEECCSSC
T ss_pred cccCCCCCEEECCCCccCc--chhhhhhhhccccccccccc
Confidence 4566777777777666543 21224567777777777653
No 32
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.43 E-value=0.05 Score=48.09 Aligned_cols=64 Identities=20% Similarity=0.255 Sum_probs=38.6
Q ss_pred CccCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeEEE--ecccccceEEEEeccc
Q 010478 241 LSGVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSLKV--VGSAIQLKHLRISTCY 304 (509)
Q Consensus 241 ~~~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l~i--~~~~~~Lk~L~l~~c~ 304 (509)
+.++++|++|+|++..+.+..-...+.+++.+++|.+..+..+..... -..+++|+.|.+.++.
T Consensus 49 f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~ 114 (242)
T d1xwdc1 49 FSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTG 114 (242)
T ss_dssp TTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEEEESCC
T ss_pred hhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccccchhh
Confidence 567888888888765432210011245678888888877765543221 1234788888887764
No 33
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=91.73 E-value=0.023 Score=48.74 Aligned_cols=37 Identities=16% Similarity=0.083 Sum_probs=21.7
Q ss_pred cCCcEEEEeeEEEChhhHHHHHhCCccccceeeeccc
Q 010478 245 KYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSE 281 (509)
Q Consensus 245 p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~ 281 (509)
+++++|+|++-.++...-...+.+.+.|++|.|.+..
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~ 65 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQ 65 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSC
T ss_pred CCCCEEEeCCCCCcccccccccCCCceEeeeeccccc
Confidence 5778888777665432112234556677777776653
No 34
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.04 E-value=0.015 Score=56.46 Aligned_cols=81 Identities=20% Similarity=0.281 Sum_probs=43.9
Q ss_pred CceEEEEEeccchhhhhhhcccccCCCCccEEEEeechhh-h---hccC--CCCCCcccEEEEEeeccCccCHHHHHHHh
Q 010478 337 QLVDISFRGVMLTRVRNVVGPITSCFPQLKTLELDSCDEL-Y---AQFS--EHELPNLTHLHLRVATLNRESLLGLASIM 410 (509)
Q Consensus 337 ~L~~l~i~~~~~~~~~~~~~~l~~~l~~L~~L~L~~~~~~-~---~~~~--~~~f~~Lk~L~L~~~~~~~~~~~~l~~lL 410 (509)
+|+++++....-. +..+..++..++++++|.|..|. + . ..+. +..+++|++|+|..+ .....++..+.
T Consensus 3 ~l~~ld~~~~~i~--~~~~~~l~~~l~~l~~L~L~~~~-i~~~~~~~l~~~L~~~~~L~~LdLs~N---~i~~~~~~~l~ 76 (460)
T d1z7xw1 3 DIQSLDIQCEELS--DARWAELLPLLQQCQVVRLDDCG-LTEARCKDISSALRVNPALAELNLRSN---ELGDVGVHCVL 76 (460)
T ss_dssp EEEEEEEESCCCC--HHHHHHHHHHHTTCSEEEEESSC-CCHHHHHHHHHHHHTCTTCCEEECTTC---CCHHHHHHHHH
T ss_pred CCCEEEeeCCcCC--hHHHHHHHHhCCCCCEEEeCCCC-CCHHHHHHHHHHHhcCCCCCEEECcCC---cCChHHHHHHH
Confidence 4677777662221 22334555667778888887653 2 1 1111 456777888887433 23333344443
Q ss_pred hc----CCCCcEEEEEE
Q 010478 411 KA----CPFLQTLIVQF 423 (509)
Q Consensus 411 ~~----~P~Le~L~i~~ 423 (509)
+. .+.|++|++..
T Consensus 77 ~~l~~~~~~L~~L~L~~ 93 (460)
T d1z7xw1 77 QGLQTPSCKIQKLSLQN 93 (460)
T ss_dssp HTTCSTTCCCCEEECTT
T ss_pred HHHhcCCCCCCEEECCC
Confidence 32 34677777754
No 35
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=90.61 E-value=0.022 Score=52.87 Aligned_cols=99 Identities=23% Similarity=0.277 Sum_probs=64.3
Q ss_pred cCCcEEEEeeEEEChh-hHHHHHhCCccccceeeecccceeeEEEe---cccccceEEEEecccCccEEEE----ECCce
Q 010478 245 KYLRSLRLFSVNVTGE-ILEFILHNCPLLDQLSVVRSETLVSLKVV---GSAIQLKHLRISTCYRLNEIKI----STPNL 316 (509)
Q Consensus 245 p~Lk~L~L~~v~~~~~-~l~~lls~CP~Le~L~L~~c~~~~~l~i~---~~~~~Lk~L~l~~c~~l~~l~i----~aP~L 316 (509)
.+++.|+|.+..+... .+..-+.+++.||+|+|.+|..+.. .|+ ..+++|++|++.++. +..+.. ..++|
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g-~iP~~i~~L~~L~~L~Ls~N~-l~~~~~~~~~~~~~L 127 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVG-PIPPAIAKLTQLHYLYITHTN-VSGAIPDFLSQIKTL 127 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEES-CCCGGGGGCTTCSEEEEEEEC-CEEECCGGGGGCTTC
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCcccccccccccccccc-ccccccccccccchhhhcccc-ccccccccccchhhh
Confidence 4688888887766542 2334467899999999998866542 122 235799999999886 333221 25667
Q ss_pred eEEEEecCCc--cceeeecCCCCceEEEEEe
Q 010478 317 LSFKYFGPGQ--ELKLHIENAPQLVDISFRG 345 (509)
Q Consensus 317 ~~L~~~g~~~--~~~~~~~~~~~L~~l~i~~ 345 (509)
+.+.+.+... ..+-.+.+++.++.+++..
T Consensus 128 ~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~ 158 (313)
T d1ogqa_ 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp CEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred cccccccccccccCchhhccCcccceeeccc
Confidence 7777765431 1223466778888877765
No 36
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=90.12 E-value=0.04 Score=45.95 Aligned_cols=126 Identities=18% Similarity=0.191 Sum_probs=73.9
Q ss_pred hhhhcccccCCCCccEEEEeechhh-----hhccC-CCCCCcccEEEEEeeccCccCHHHHHHHhhcCCCCcEEEEEEee
Q 010478 352 RNVVGPITSCFPQLKTLELDSCDEL-----YAQFS-EHELPNLTHLHLRVATLNRESLLGLASIMKACPFLQTLIVQFDY 425 (509)
Q Consensus 352 ~~~~~~l~~~l~~L~~L~L~~~~~~-----~~~~~-~~~f~~Lk~L~L~~~~~~~~~~~~l~~lL~~~P~Le~L~i~~~~ 425 (509)
+..+..+....++|++|.|.....+ ..... ....++|++|+|..+..+......+...++..+.|+.|++....
T Consensus 6 ~~~l~~~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~ 85 (166)
T d1io0a_ 6 EETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNF 85 (166)
T ss_dssp HHHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSC
T ss_pred HHHHHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccc
Confidence 3445556667788888888753333 11222 56778899999865543444455677788888999988876531
Q ss_pred cCCc-cCCc-cccCccccCCccEEEEeccc---CCccHHHHHHHHHhcCccCCcEEEEec
Q 010478 426 NGYK-VGRR-RKVPRHSHQHLKLVELHGFL---GRPIDLELAFYILENAMTLEKMVVNRT 480 (509)
Q Consensus 426 ~~~~-~~~~-~~~p~c~~~~Lk~V~i~~f~---g~~~e~~l~~~lL~na~~Le~m~I~~~ 480 (509)
-... ...+ ..+ ....+|+.+.+.... |.+....++.. ++..+.|+++.+...
T Consensus 86 ~~~~g~~~l~~~l--~~~~~L~~l~L~l~~n~i~~~~~~~La~~-L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 86 ISGSGILALVEAL--QSNTSLIELRIDNQSQPLGNNVEMEIANM-LEKNTTLLKFGYHFT 142 (166)
T ss_dssp CCHHHHHHHHHGG--GGCSSCCEEECCCCSSCCCHHHHHHHHHH-HHHCSSCCEEECCCS
T ss_pred ccchhHHHHHHHH--HhCccccEEeeccCCCcCcHHHHHHHHHH-HHhCCCcCEEeCcCC
Confidence 1100 0000 011 134678887775432 33344455544 456788999887644
No 37
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=90.07 E-value=0.1 Score=41.18 Aligned_cols=32 Identities=25% Similarity=0.333 Sum_probs=14.5
Q ss_pred CCCCccEEEEeechhhhhccC-CCCCCcccEEEEE
Q 010478 361 CFPQLKTLELDSCDELYAQFS-EHELPNLTHLHLR 394 (509)
Q Consensus 361 ~l~~L~~L~L~~~~~~~~~~~-~~~f~~Lk~L~L~ 394 (509)
.+++|+.|.++.. .+ ..++ +..+++|++|++.
T Consensus 41 ~l~~L~~L~l~~N-~i-~~l~~~~~l~~L~~L~l~ 73 (124)
T d1dcea3 41 ALRCLEVLQASDN-AL-ENVDGVANLPRLQELLLC 73 (124)
T ss_dssp GCTTCCEEECCSS-CC-CCCGGGTTCSSCCEEECC
T ss_pred hhhcccccccccc-cc-cccCccccccccCeEECC
Confidence 4555555555521 11 1112 4445555555553
No 38
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=88.94 E-value=0.093 Score=44.67 Aligned_cols=11 Identities=18% Similarity=0.344 Sum_probs=4.8
Q ss_pred CCCCccEEEEe
Q 010478 361 CFPQLKTLELD 371 (509)
Q Consensus 361 ~l~~L~~L~L~ 371 (509)
.+++|++|.|+
T Consensus 76 ~~~~L~~L~Ls 86 (192)
T d1w8aa_ 76 GASHIQELQLG 86 (192)
T ss_dssp TCTTCCEEECC
T ss_pred cccccceeeec
Confidence 33444444444
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=86.10 E-value=0.14 Score=42.53 Aligned_cols=121 Identities=14% Similarity=0.233 Sum_probs=55.9
Q ss_pred cccccCCCCccEEEEeechhh-----hhccC-CCCCCcccEEEEEeeccCccCHHHHHHHhhcCCCCcEEEEEEeecCCc
Q 010478 356 GPITSCFPQLKTLELDSCDEL-----YAQFS-EHELPNLTHLHLRVATLNRESLLGLASIMKACPFLQTLIVQFDYNGYK 429 (509)
Q Consensus 356 ~~l~~~l~~L~~L~L~~~~~~-----~~~~~-~~~f~~Lk~L~L~~~~~~~~~~~~l~~lL~~~P~Le~L~i~~~~~~~~ 429 (509)
..+....++|++|.|+.+..+ ..... +...++|++|+|..+..+......+...++..+.|+.|++....-...
T Consensus 8 ~~l~~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~ 87 (167)
T d1pgva_ 8 NRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPE 87 (167)
T ss_dssp HHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHH
T ss_pred HHHHhCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchH
Confidence 344445556666666532211 11111 444556666666433222222334555666666677666654310000
Q ss_pred -cCCc-cccCccccCCccEEEEeccc----CCccHHHHHHHHHhcCccCCcEEEEe
Q 010478 430 -VGRR-RKVPRHSHQHLKLVELHGFL----GRPIDLELAFYILENAMTLEKMVVNR 479 (509)
Q Consensus 430 -~~~~-~~~p~c~~~~Lk~V~i~~f~----g~~~e~~l~~~lL~na~~Le~m~I~~ 479 (509)
...+ ..+. ...+|+++.+.+.. |.+....++..|-+| +.|+++.+..
T Consensus 88 g~~~l~~aL~--~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n-~sL~~l~l~~ 140 (167)
T d1pgva_ 88 LLARLLRSTL--VTQSIVEFKADNQRQSVLGNQVEMDMMMAIEEN-ESLLRVGISF 140 (167)
T ss_dssp HHHHHHHHTT--TTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHC-SSCCEEECCC
T ss_pred HHHHHHHHHH--hCCcCCEEECCCCcCCCccHHHHHHHHHHHHhC-CCccEeeCcC
Confidence 0000 0011 13456666665432 333445666665444 7788776654
No 40
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=85.77 E-value=0.01 Score=51.59 Aligned_cols=61 Identities=25% Similarity=0.270 Sum_probs=40.2
Q ss_pred CccCcCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeEEEecccccceEEEEeccc
Q 010478 241 LSGVKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSLKVVGSAIQLKHLRISTCY 304 (509)
Q Consensus 241 ~~~~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l~i~~~~~~Lk~L~l~~c~ 304 (509)
+.++++|+.|+|++..+++ +..+...++.|+.|++.++. ++.+.--..+++|+.|++.++.
T Consensus 66 l~~l~~L~~L~Ls~N~i~~--i~~~~~~~~~L~~L~l~~N~-i~~l~~~~~l~~L~~L~L~~N~ 126 (198)
T d1m9la_ 66 LSGMENLRILSLGRNLIKK--IENLDAVADTLEELWISYNQ-IASLSGIEKLVNLRVLYMSNNK 126 (198)
T ss_dssp HHHHTTCCEEECCEEEECS--CSSHHHHHHHCCEEECSEEE-CCCHHHHHHHHHSSEEEESEEE
T ss_pred ccCCccccChhhccccccc--cccccccccccccccccccc-ccccccccccccccccccccch
Confidence 4578999999999998875 22334456789999998874 3322111234667777776553
No 41
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.08 E-value=0.67 Score=37.67 Aligned_cols=96 Identities=17% Similarity=0.077 Sum_probs=46.2
Q ss_pred CCCCccEEEEeechhhhhccC--CCCCCcccEEEEEeeccCccCHHHHHHHhhcCCCCcEEEEEEeecCCccCCccccCc
Q 010478 361 CFPQLKTLELDSCDELYAQFS--EHELPNLTHLHLRVATLNRESLLGLASIMKACPFLQTLIVQFDYNGYKVGRRRKVPR 438 (509)
Q Consensus 361 ~l~~L~~L~L~~~~~~~~~~~--~~~f~~Lk~L~L~~~~~~~~~~~~l~~lL~~~P~Le~L~i~~~~~~~~~~~~~~~p~ 438 (509)
+++++++|.+.+...+...-+ +..+++|+.|+|..+.-.... ...+...++|+.|+++.. .+..+|.
T Consensus 29 ~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~----~~~f~~l~~L~~L~Ls~N-------~l~~l~~ 97 (156)
T d2ifga3 29 GAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVA----PDAFHFTPRLSRLNLSFN-------ALESLSW 97 (156)
T ss_dssp SCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEEC----TTGGGSCSCCCEEECCSS-------CCSCCCS
T ss_pred CccccCeeecCCCccccccCchhhccccccCcceeeccccCCcc----cccccccccccceeccCC-------CCcccCh
Confidence 345666666653322311111 455667777777433211111 234566777887777652 2222321
Q ss_pred --cccCCccEEEEec--ccCCccHHHHHHHHHh
Q 010478 439 --HSHQHLKLVELHG--FLGRPIDLELAFYILE 467 (509)
Q Consensus 439 --c~~~~Lk~V~i~~--f~g~~~e~~l~~~lL~ 467 (509)
....+|+.+.+.| |.....-.++..++-.
T Consensus 98 ~~~~~~~l~~L~L~~Np~~C~C~~~~l~~~~~~ 130 (156)
T d2ifga3 98 KTVQGLSLQELVLSGNPLHCSCALRWLQRWEEE 130 (156)
T ss_dssp TTTCSCCCCEEECCSSCCCCCGGGHHHHHHHHT
T ss_pred hhhccccccccccCCCcccCCchHHHHHHHHHh
Confidence 1223577888776 3223333345555433
No 42
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=83.63 E-value=0.28 Score=45.07 Aligned_cols=73 Identities=19% Similarity=0.048 Sum_probs=42.1
Q ss_pred CcCCcEEEEeeEEEChhhHHHHHhCCccccceeeecccceeeEEEecccccceEEEEecccCccEEEE--ECCceeEEEE
Q 010478 244 VKYLRSLRLFSVNVTGEILEFILHNCPLLDQLSVVRSETLVSLKVVGSAIQLKHLRISTCYRLNEIKI--STPNLLSFKY 321 (509)
Q Consensus 244 ~p~Lk~L~L~~v~~~~~~l~~lls~CP~Le~L~L~~c~~~~~l~i~~~~~~Lk~L~l~~c~~l~~l~i--~aP~L~~L~~ 321 (509)
.++|++|+|++-.+++ + -....+|++|.+.++.. +.+ ..-.+.|++|++.++. +..+.. ..++|+.+.+
T Consensus 57 ~~~L~~L~Ls~N~l~~--l---p~~~~~L~~L~l~~n~l-~~l--~~lp~~L~~L~L~~n~-l~~lp~~~~l~~L~~L~l 127 (353)
T d1jl5a_ 57 PPHLESLVASCNSLTE--L---PELPQSLKSLLVDNNNL-KAL--SDLPPLLEYLGVSNNQ-LEKLPELQNSSFLKIIDV 127 (353)
T ss_dssp CTTCSEEECCSSCCSS--C---CCCCTTCCEEECCSSCC-SCC--CSCCTTCCEEECCSSC-CSSCCCCTTCTTCCEEEC
T ss_pred CCCCCEEECCCCCCcc--c---ccchhhhhhhhhhhccc-chh--hhhccccccccccccc-cccccchhhhccceeecc
Confidence 4788888888766542 1 12245788888877542 211 1111468888887665 333221 2466777776
Q ss_pred ecCC
Q 010478 322 FGPG 325 (509)
Q Consensus 322 ~g~~ 325 (509)
.+..
T Consensus 128 ~~~~ 131 (353)
T d1jl5a_ 128 DNNS 131 (353)
T ss_dssp CSSC
T ss_pred cccc
Confidence 6554
No 43
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.09 E-value=0.33 Score=39.69 Aligned_cols=75 Identities=21% Similarity=0.150 Sum_probs=36.9
Q ss_pred ecCCCCceEEEEEeccchhhhhhhcccccCCCCccEEEEeechhhhhccC--CCCCCcccEEEEEeeccC-ccCHHHHHH
Q 010478 332 IENAPQLVDISFRGVMLTRVRNVVGPITSCFPQLKTLELDSCDELYAQFS--EHELPNLTHLHLRVATLN-RESLLGLAS 408 (509)
Q Consensus 332 ~~~~~~L~~l~i~~~~~~~~~~~~~~l~~~l~~L~~L~L~~~~~~~~~~~--~~~f~~Lk~L~L~~~~~~-~~~~~~l~~ 408 (509)
+.++++|+.+++....- ..+-...+..+++|++|.|+... + ..++ .....+|++|+|..+... ..+..++..
T Consensus 52 f~~l~~L~~L~Ls~N~l---~~i~~~~f~~l~~L~~L~Ls~N~-l-~~l~~~~~~~~~l~~L~L~~Np~~C~C~~~~l~~ 126 (156)
T d2ifga3 52 LRGLGELRNLTIVKSGL---RFVAPDAFHFTPRLSRLNLSFNA-L-ESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQR 126 (156)
T ss_dssp SCSCCCCSEEECCSSCC---CEECTTGGGSCSCCCEEECCSSC-C-SCCCSTTTCSCCCCEEECCSSCCCCCGGGHHHHH
T ss_pred hccccccCcceeecccc---CCcccccccccccccceeccCCC-C-cccChhhhccccccccccCCCcccCCchHHHHHH
Confidence 34455555555544211 11112334567888888887322 2 1222 122235788888554321 234555666
Q ss_pred Hhh
Q 010478 409 IMK 411 (509)
Q Consensus 409 lL~ 411 (509)
.++
T Consensus 127 ~~~ 129 (156)
T d2ifga3 127 WEE 129 (156)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 44
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=75.67 E-value=0.53 Score=43.07 Aligned_cols=50 Identities=20% Similarity=0.068 Sum_probs=25.1
Q ss_pred ccceEEEEecccCccEEEEECCceeEEEEecCCccceeeecCCCCceEEEEEe
Q 010478 293 IQLKHLRISTCYRLNEIKISTPNLLSFKYFGPGQELKLHIENAPQLVDISFRG 345 (509)
Q Consensus 293 ~~Lk~L~l~~c~~l~~l~i~aP~L~~L~~~g~~~~~~~~~~~~~~L~~l~i~~ 345 (509)
++|++|.+.+|. +..+.-..|+|+.|.+++.. ..-.....++|+++++..
T Consensus 284 ~~L~~L~Ls~N~-l~~lp~~~~~L~~L~L~~N~--L~~l~~~~~~L~~L~L~~ 333 (353)
T d1jl5a_ 284 PSLEELNVSNNK-LIELPALPPRLERLIASFNH--LAEVPELPQNLKQLHVEY 333 (353)
T ss_dssp TTCCEEECCSSC-CSCCCCCCTTCCEEECCSSC--CSCCCCCCTTCCEEECCS
T ss_pred CCCCEEECCCCc-cCccccccCCCCEEECCCCc--CCccccccCCCCEEECcC
Confidence 566666666654 33333334566666665543 111112234566666654
No 45
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.68 E-value=0.8 Score=37.40 Aligned_cols=20 Identities=15% Similarity=-0.097 Sum_probs=14.9
Q ss_pred cHHHHHHHHHhcCccCCcEE
Q 010478 457 IDLELAFYILENAMTLEKMV 476 (509)
Q Consensus 457 ~e~~l~~~lL~na~~Le~m~ 476 (509)
....+..++++..|.|+.+.
T Consensus 133 ~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 133 DQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp SHHHHHHHHHTTSTTCCEET
T ss_pred cchhHHHHHHHHCCCCCEEC
Confidence 45577788888888888763
No 46
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.06 E-value=1.8 Score=35.13 Aligned_cols=14 Identities=29% Similarity=0.358 Sum_probs=6.5
Q ss_pred hCCccccceeeecc
Q 010478 267 HNCPLLDQLSVVRS 280 (509)
Q Consensus 267 s~CP~Le~L~L~~c 280 (509)
..||.|+.|+|+++
T Consensus 62 ~~~~~L~~L~Ls~N 75 (162)
T d1koha1 62 ENIPELLSLNLSNN 75 (162)
T ss_dssp HHCTTCCCCCCCSS
T ss_pred HhCCCCCEeeCCCc
Confidence 34444444444444
Done!