Query         010479
Match_columns 509
No_of_seqs    183 out of 1964
Neff          11.3
Searched_HMMs 46136
Date          Fri Mar 29 01:00:43 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010479.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010479hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.2E-88 2.5E-93  642.0  47.3  462   31-506    25-488 (489)
  2 PLN03234 cytochrome P450 83B1; 100.0 3.6E-82 7.9E-87  621.3  49.3  471   29-505    25-498 (499)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0   1E-81 2.2E-86  584.7  42.3  466   22-506    21-499 (499)
  4 PLN02971 tryptophan N-hydroxyl 100.0 3.6E-81 7.7E-86  616.2  47.0  471   29-505    54-533 (543)
  5 PLN02966 cytochrome P450 83A1  100.0 1.7E-80 3.6E-85  608.2  47.9  477   25-506    22-500 (502)
  6 PLN02687 flavonoid 3'-monooxyg 100.0 2.2E-80 4.8E-85  608.9  48.4  476   25-506    27-509 (517)
  7 PLN02183 ferulate 5-hydroxylas 100.0 2.3E-80 5.1E-85  608.6  47.2  470   26-508    30-514 (516)
  8 PLN00110 flavonoid 3',5'-hydro 100.0 1.6E-79 3.5E-84  598.9  47.6  492    3-506     3-497 (504)
  9 PLN03112 cytochrome P450 famil 100.0 4.9E-79 1.1E-83  600.8  50.4  481   23-507    23-509 (514)
 10 PLN00168 Cytochrome P450; Prov 100.0 6.1E-78 1.3E-82  591.9  48.1  474   23-506    26-517 (519)
 11 PTZ00404 cytochrome P450; Prov 100.0 7.8E-78 1.7E-82  588.0  46.5  474   10-505     7-482 (482)
 12 PLN02394 trans-cinnamate 4-mon 100.0 2.4E-77 5.2E-82  587.7  47.0  467   29-506    27-502 (503)
 13 PLN02655 ent-kaurene oxidase   100.0 5.3E-76 1.2E-80  570.9  43.6  458   34-507     1-465 (466)
 14 PLN02290 cytokinin trans-hydro 100.0 1.7E-76 3.8E-81  583.0  39.6  458   26-506    36-515 (516)
 15 KOG0157 Cytochrome P450 CYP4/C 100.0 7.4E-77 1.6E-81  574.7  36.2  455   30-506    33-496 (497)
 16 PLN03018 homomethionine N-hydr 100.0 3.1E-74 6.6E-79  562.3  48.8  471   28-505    36-523 (534)
 17 KOG0159 Cytochrome P450 CYP11/ 100.0   3E-75 6.6E-80  527.9  35.7  456   30-506    48-518 (519)
 18 PLN02500 cytochrome P450 90B1  100.0 8.3E-75 1.8E-79  566.8  40.0  440   27-504    33-488 (490)
 19 PLN02774 brassinosteroid-6-oxi 100.0 2.2E-74 4.7E-79  559.2  37.7  435   26-504    25-462 (463)
 20 PF00067 p450:  Cytochrome P450 100.0 9.9E-75 2.1E-79  569.7  29.3  456   34-502     1-463 (463)
 21 PLN02169 fatty acid (omega-1)- 100.0 1.1E-72 2.3E-77  549.7  40.7  452   33-505    32-499 (500)
 22 PLN03195 fatty acid omega-hydr 100.0 8.1E-73 1.8E-77  556.4  40.0  456   34-506    32-516 (516)
 23 PLN02738 carotene beta-ring hy 100.0 2.1E-72 4.5E-77  554.7  41.2  443   44-506   143-595 (633)
 24 PLN02196 abscisic acid 8'-hydr 100.0 2.9E-72 6.2E-77  543.8  39.5  433   24-504    27-461 (463)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 9.4E-72   2E-76  539.6  37.9  439   27-507     2-451 (452)
 26 PLN02302 ent-kaurenoic acid ox 100.0 1.3E-70 2.9E-75  540.0  42.7  442   27-506    37-488 (490)
 27 PLN02987 Cytochrome P450, fami 100.0 3.1E-70 6.7E-75  527.3  41.2  462    1-506     1-469 (472)
 28 PLN02936 epsilon-ring hydroxyl 100.0 1.2E-70 2.7E-75  535.6  38.5  453   32-506    12-482 (489)
 29 KOG0684 Cytochrome P450 [Secon 100.0 6.4E-70 1.4E-74  480.5  33.5  444   32-506    31-485 (486)
 30 PLN02426 cytochrome P450, fami 100.0 8.7E-68 1.9E-72  514.2  43.1  444   40-507    49-501 (502)
 31 PLN02648 allene oxide synthase 100.0 1.7E-60 3.8E-65  455.4  32.2  408   29-477    14-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.7E-55 3.6E-60  416.7  32.7  360   54-476    24-387 (411)
 33 PF12554 MOZART1:  Mitotic-spin  62.7      29 0.00063   21.4   4.5   43  296-338     5-47  (48)
 34 KOG3653 Transforming growth fa  61.8      30 0.00065   33.3   6.7   36   64-99    222-257 (534)
 35 KOG0114 Predicted RNA-binding   59.4      42 0.00092   24.6   5.6   62   29-93      9-76  (124)
 36 PF15330 SIT:  SHP2-interacting  55.3      27 0.00059   26.0   4.3   11   39-49     45-55  (107)
 37 PRK06789 flagellar motor switc  53.6      15 0.00033   25.1   2.6   41  363-403    21-63  (74)
 38 PF12508 DUF3714:  Protein of u  51.4      12 0.00025   31.6   2.1   44  356-401    51-94  (200)
 39 PF05952 ComX:  Bacillus compet  49.7      17 0.00037   23.3   2.2   22  319-340     4-25  (57)
 40 PF14129 DUF4296:  Domain of un  48.7      96  0.0021   22.0   7.5   51  292-342    28-78  (87)
 41 COG0851 MinE Septum formation   44.7      39 0.00085   23.8   3.5   17  328-344    36-52  (88)
 42 PF12273 RCR:  Chitin synthesis  42.1      12 0.00025   29.2   0.8   16   17-32     14-29  (130)
 43 PF05261 Tra_M:  TraM protein,   41.7 1.6E+02  0.0034   22.6   8.3   97  249-345    11-124 (127)
 44 PRK13713 conjugal transfer pro  39.2 1.7E+02  0.0036   22.1   7.8   80  250-329     5-92  (118)
 45 PF05393 Hum_adeno_E3A:  Human   39.1      65  0.0014   22.6   3.8    8   37-44     64-71  (94)
 46 PF09201 SRX:  SRX;  InterPro:   38.3      32 0.00069   26.6   2.5   23  446-468    18-40  (148)
 47 PF14459 Prok-E2_C:  Prokaryoti  37.9      14 0.00031   26.9   0.6   17  435-451   104-120 (131)
 48 PHA03049 IMV membrane protein;  30.8 1.5E+02  0.0032   19.7   4.2   36   10-45      9-44  (68)
 49 KOG3506 40S ribosomal protein   30.5      22 0.00048   22.3   0.5   11  439-449    12-22  (56)
 50 COG5394 Uncharacterized protei  29.6   3E+02  0.0065   22.2   7.4   69  274-345    57-125 (193)
 51 PF13893 RRM_5:  RNA recognitio  28.3 1.5E+02  0.0033   18.4   4.9   36   58-93      1-40  (56)
 52 PF11138 DUF2911:  Protein of u  27.1      70  0.0015   25.4   2.9   42  381-423    51-99  (145)
 53 cd04516 TBP_eukaryotes eukaryo  26.1      47   0.001   27.4   1.9   56  417-472    29-86  (174)
 54 PF14483 Cut8_M:  Cut8 dimerisa  25.7 1.1E+02  0.0024   17.8   2.8   13  324-336    23-35  (38)
 55 PRK05933 type III secretion sy  25.4      71  0.0015   29.0   2.9   44  360-403   317-363 (372)
 56 PLN00062 TATA-box-binding prot  25.1      50  0.0011   27.4   1.8   55  417-471    29-85  (179)
 57 PF08776 VASP_tetra:  VASP tetr  23.8 1.5E+02  0.0032   17.4   3.0   29  327-369     9-37  (40)
 58 PRK13991 cell division topolog  23.7 2.2E+02  0.0047   20.4   4.5   18  327-344    35-52  (87)
 59 PF07886 BA14K:  BA14K-like pro  23.5      80  0.0017   17.4   1.8   16  434-449    16-31  (31)
 60 PHA03162 hypothetical protein;  23.4      67  0.0015   24.6   2.0   24  442-465     2-25  (135)
 61 PF05961 Chordopox_A13L:  Chord  23.4 2.2E+02  0.0047   19.0   4.0    7   10-16      9-15  (68)
 62 PF06667 PspB:  Phage shock pro  22.6 1.7E+02  0.0036   20.2   3.6    8   17-24     20-27  (75)
 63 COG1886 FliN Flagellar motor s  22.4      86  0.0019   24.7   2.6   43  360-402    82-126 (136)
 64 PF08492 SRP72:  SRP72 RNA-bind  22.1      59  0.0013   21.1   1.3    7  420-426    44-50  (59)
 65 PF13993 YccJ:  YccJ-like prote  22.0 1.3E+02  0.0028   19.4   2.8   31  307-337     8-39  (69)
 66 PRK10597 DNA damage-inducible   21.9 2.7E+02  0.0058   19.6   4.6   39   55-93     23-69  (81)
 67 PRK09458 pspB phage shock prot  21.7 1.9E+02  0.0041   19.9   3.7    9   16-24     19-27  (75)
 68 TIGR03779 Bac_Flav_CT_M Bacter  21.5      64  0.0014   30.8   2.0   44  356-401   254-297 (410)
 69 PF08285 DPM3:  Dolichol-phosph  20.7 1.4E+02  0.0031   21.5   3.2   29  315-343    54-82  (91)
 70 PRK13989 cell division topolog  20.4 1.8E+02   0.004   20.6   3.6   19  327-345    36-54  (84)
 71 TIGR03244 arg_catab_AstA argin  20.2      84  0.0018   29.0   2.4   54  321-374   143-211 (336)
 72 PF15300 INT_SG_DDX_CT_C:  INTS  20.0      58  0.0013   21.7   1.0   15  357-371    40-54  (65)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.2e-88  Score=641.99  Aligned_cols=462  Identities=46%  Similarity=0.828  Sum_probs=406.1

Q ss_pred             CCCCCCCCCCCccccccCCCCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCC-ccccce
Q 010479           31 SSLPPGPKGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPA-LVATQR  109 (509)
Q Consensus        31 ~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~-~~~~~~  109 (509)
                      .++||||+++|++||++.+.....+..+.++.++||||+.+|+|..++|||+|++++++++.+++..|++|+. ......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            8999999999999999998333589999999999999999999999999999999999999999999999997 234456


Q ss_pred             eccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHhHhh
Q 010479          110 LTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLSCNTICRLG  189 (509)
Q Consensus       110 ~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~~~i~~~~  189 (509)
                      +.+++.+++++.+|+.||.+||.++..+++...+++......++++.+++.+.+ ...++++|+.+.+..++.++|++++
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~~  183 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRML  183 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHHH
Confidence            666788999999999999999999999999999999888889999999999998 3233799999999999999999999


Q ss_pred             ccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccc-hhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHhcCCcCCc
Q 010479          190 FGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFP-FMGWIDKLTGMMRRLENNFQESDRFYQELIDEHLDPKRTK  268 (509)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (509)
                      ||.++...+  .+...++........+......+.+++| ++.++.+..+..+.......++.+++++.|+++++.. ..
T Consensus       184 fG~rf~~~~--~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~~  260 (489)
T KOG0156|consen  184 FGRRFEEED--EEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-GD  260 (489)
T ss_pred             hCCccccCC--chHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cc
Confidence            999998742  2245568888888888888888888899 5666654445666777777779999999999988765 22


Q ss_pred             ccCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhhcCCCCCC
Q 010479          269 ADMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSLVGGNKSF  348 (509)
Q Consensus       269 ~~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~~~~~~~~  348 (509)
                       +.. .|+++.+++..+++.... +|+++|...+..+++||+|||++|+.|++.+|++||++|+|+++||++++|.+ +.
T Consensus       261 -~~~-~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~-r~  336 (489)
T KOG0156|consen  261 -EEG-RDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKG-RL  336 (489)
T ss_pred             -CCC-CcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-CC
Confidence             222 799999999977654332 99999999999999999999999999999999999999999999999999987 55


Q ss_pred             CChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccCCCC
Q 010479          349 VDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWENPEEFNPERFIDRS  428 (509)
Q Consensus       349 ~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~  428 (509)
                      ++.+|+.+||||+|||+||+|+||++|+.++|.+.+|+.|+||.|||||.|+++.|++|+||++|+||++|+||||++++
T Consensus       337 v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~  416 (489)
T KOG0156|consen  337 VSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN  416 (489)
T ss_pred             CChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999975


Q ss_pred             CCCCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceecccceEEEEeecc
Q 010479          429 IDFKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKKNFLVLLAKYHE  506 (509)
Q Consensus       429 ~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  506 (509)
                       +.......++|||.|+|.|||..+|.+++.+++++|+++|+|+.+++    ++++... +++...+.|+.+...+|.
T Consensus       417 -d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~-~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  417 -DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEA-GLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             -cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCccc-ccceecCCcceeeeecCC
Confidence             33335678999999999999999999999999999999999998876    2344444 377788889988888773


No 2  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=3.6e-82  Score=621.28  Aligned_cols=471  Identities=49%  Similarity=0.931  Sum_probs=384.6

Q ss_pred             CCCCCCCCCCCCCccccccCCCCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCCccccc
Q 010479           29 HASSLPPGPKGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPALVATQ  108 (509)
Q Consensus        29 ~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~  108 (509)
                      ++.+.||||+++|++||++.+...+++.++.+++++||++|++++|+.++|+++||+++++++.++...|..++......
T Consensus        25 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~  104 (499)
T PLN03234         25 KSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ  104 (499)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence            45678999999999999988744467889999999999999999999999999999999999998877787776544333


Q ss_pred             eeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHhHh
Q 010479          109 RLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLSCNTICRL  188 (509)
Q Consensus       109 ~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~~~i~~~  188 (509)
                      ...+.+..+.+...++.|+++||.++.++|+..++.++.+.++++++++++.+.+...+++++|+.+++..+++|+++++
T Consensus       105 ~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~  184 (499)
T PLN03234        105 TMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQ  184 (499)
T ss_pred             hhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHH
Confidence            22323344445556899999999866789999999999999999999999999876666778999999999999999999


Q ss_pred             hccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHhcCCcCCc
Q 010479          189 GFGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQELIDEHLDPKRTK  268 (509)
Q Consensus       189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (509)
                      +||.+++..+   .....+...................+|++.++..+.+..++..++.+.+.+++.+.++++++....+
T Consensus       185 ~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  261 (499)
T PLN03234        185 AFGKRYNEYG---TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPK  261 (499)
T ss_pred             HhCCcccccc---hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence            9999877532   1233344444433322222223344565544433334456677888899999999998876542222


Q ss_pred             ccCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhhcCCCCCC
Q 010479          269 ADMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSLVGGNKSF  348 (509)
Q Consensus       269 ~~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~~~~~~~~  348 (509)
                      ..  ..|+++.|++..++++....+++++|++++.++++||+|||+++++|++++|++||++|++||+|+++++++. +.
T Consensus       262 ~~--~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~-~~  338 (499)
T PLN03234        262 QE--TESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDK-GY  338 (499)
T ss_pred             CC--cccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-CC
Confidence            11  2689999998765433223699999999999999999999999999999999999999999999999999764 67


Q ss_pred             CChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCC-CCCCCCCCCccCCC
Q 010479          349 VDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAW-ENPEEFNPERFIDR  427 (509)
Q Consensus       349 ~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~~~~  427 (509)
                      ++++++++||||+|||+||||++|++++.++|.+.+|++++||.|||||.|+++++++|+||++| +||++||||||+++
T Consensus       339 ~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~  418 (499)
T PLN03234        339 VSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKE  418 (499)
T ss_pred             CCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCC
Confidence            89999999999999999999999999987679999999999999999999999999999999999 89999999999975


Q ss_pred             CCC--CCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceecccceEEEEeec
Q 010479          428 SID--FKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKKNFLVLLAKYH  505 (509)
Q Consensus       428 ~~~--~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  505 (509)
                      +..  .......++|||+|+|.|+|+++|++|+++++++|+++|+|+++++..++.+......++...+++++.+.+++|
T Consensus       419 ~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        419 HKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             CCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence            432  223456799999999999999999999999999999999999887643345566667888888899999999887


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1e-81  Score=584.73  Aligned_cols=466  Identities=26%  Similarity=0.402  Sum_probs=361.3

Q ss_pred             HhccccCCCCCCCCCCCCCCccccccCCCC-CCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCC
Q 010479           22 RRHITSRHASSLPPGPKGLPFIGNLHQFDV-SKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSG  100 (509)
Q Consensus        22 ~~~~~~~~~~~~ppgp~~~p~lG~~~~~~~-~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~  100 (509)
                      +++...+-.++-+|+|+++|++||+..+.. ........+.+.++|+++.++.+.+|.++|+||+++++|+.++..+|.+
T Consensus        21 ~~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~  100 (499)
T KOG0158|consen   21 LRWTYSYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYN  100 (499)
T ss_pred             HHhhhhhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcC
Confidence            334433445558888888999999987742 2235555555556699999999999999999999999999998888888


Q ss_pred             CC--CccccceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhhcCCcccHHHHHH
Q 010479          101 RP--ALVATQRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIIM  178 (509)
Q Consensus       101 ~~--~~~~~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~  178 (509)
                      +.  ....-.. . .+...++...|+.||++|.. ++|.|++.+++.+.|.+++.++++++.+.+....+..+++.+.+.
T Consensus       101 r~~~~~~d~~~-~-l~~~~Lf~~~g~~WK~lR~~-lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~  177 (499)
T KOG0158|consen  101 RKRPIYGDPED-P-LSALNLFFLRGERWKRLRTK-LSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCA  177 (499)
T ss_pred             CCCCCcCCCCC-c-ccccCchhccCchHHHHHHh-hccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHH
Confidence            43  3222211 1 12345666679999999999 799999999999999999999999999998655446889999999


Q ss_pred             HHHHHHHhHhhccCccCCCCccchhHHHHHHHHHHHHHh-hcccc----cccccchhhhhhhhhcHHHHHHHHHHhHHHH
Q 010479          179 SLSCNTICRLGFGKRSDDNDEATSERSRLHALLREIQAL-SIAFF----VTDYFPFMGWIDKLTGMMRRLENNFQESDRF  253 (509)
Q Consensus       179 ~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~  253 (509)
                      +++.|+|++++||.+.+...+   ....+.......... .....    ....+|.+....   ..........+-+.+.
T Consensus       178 ~yT~DVI~~~AfG~~~~s~~d---~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l---~~~~~~~~~~~~~~~~  251 (499)
T KOG0158|consen  178 RYTTDVIGSCAFGLDANSLRD---PKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL---RVKLFPEDVTDFFRKL  251 (499)
T ss_pred             HHHHHHHhHhhcccchhhhcC---chHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh---hcccChHHHHHHHHHH
Confidence            999999999999999888652   334444433333322 11111    112223222110   0111122333344444


Q ss_pred             HHHHHHHhcCCcCCcccCCcccHHHHHHHHHhh--cC-CCC-CCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChH
Q 010479          254 YQELIDEHLDPKRTKADMQQEDLIDVLLQIRKH--RG-FKV-DLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPR  329 (509)
Q Consensus       254 ~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~--~~-~~~-~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~  329 (509)
                      +...++.|..    +. ..++|+++.+++++.+  .+ ... .+|.+||+++++.|++||.||||+++++++|+||+||+
T Consensus       252 v~~~v~~R~~----~~-~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~Pd  326 (499)
T KOG0158|consen  252 VNSRVEQREK----EN-IERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPD  326 (499)
T ss_pred             HHHHHHHHHh----cC-CCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChH
Confidence            5555555521    11 2228999999999854  11 111 59999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceee-ceeeCCCCEEEEehhhhcc
Q 010479          330 VMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVD-GYEIPAKTIVYVNAWAIGR  408 (509)
Q Consensus       330 ~q~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~-g~~ip~g~~v~~~~~~~~~  408 (509)
                      +|+|||+||+++..+. ..+++|.+++|+||++||+||||+||+++. +.|.+++|++++ ++.||||+.|+++++++||
T Consensus       327 vQ~kLreEI~~~~~~~-~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~  404 (499)
T KOG0158|consen  327 VQDKLREEIDEVLEEK-EGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYALHH  404 (499)
T ss_pred             HHHHHHHHHHHHhccc-CCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeecccccC
Confidence            9999999999997765 339999999999999999999999999999 679999999999 9999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccCCCCCCCCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcC
Q 010479          409 DPEAWENPEEFNPERFIDRSIDFKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLS  488 (509)
Q Consensus       409 d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~  488 (509)
                      ||++||||++|+||||.+++.+ ...+..|+|||.|||.|+|++||.+|+|+.|++||++|+++..+ ....+ ......
T Consensus       405 Dp~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~-~t~~~-~~~~~~  481 (499)
T KOG0158|consen  405 DPEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP-TTIIP-LEGDPK  481 (499)
T ss_pred             CcccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC-cccCc-ccCCcc
Confidence            9999999999999999987644 34568899999999999999999999999999999999999887 32222 222233


Q ss_pred             CcceecccceEEEEeecc
Q 010479          489 GTTVHKKNFLVLLAKYHE  506 (509)
Q Consensus       489 ~~~~~~~~~~~~~~~~r~  506 (509)
                      +.+..+++++.+++++|.
T Consensus       482 ~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  482 GFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             ceeeecCCceEEEEEeCC
Confidence            677888999999999984


No 4  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=3.6e-81  Score=616.17  Aligned_cols=471  Identities=26%  Similarity=0.496  Sum_probs=366.7

Q ss_pred             CCCCCCCCCCCCCccccccCCCCCC-CcHHHHHHHHhhC-CeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCCccc
Q 010479           29 HASSLPPGPKGLPFIGNLHQFDVSK-PHVSFWELSKKYG-PLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPALVA  106 (509)
Q Consensus        29 ~~~~~ppgp~~~p~lG~~~~~~~~~-~~~~~~~~~~kyG-~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~  106 (509)
                      ++.++||||+++|++||++.+.... .+.++.++.++|| +|+++++|++++|+|+||+++++++.+++..|..++....
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~  133 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA  133 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence            3457899999999999998763332 3678899999999 8999999999999999999999999988878888765333


Q ss_pred             cceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHh
Q 010479          107 TQRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLSCNTIC  186 (509)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~~~i~  186 (509)
                      ......+..+.+++.+|+.|+++||.+...+++....+.+.+.++++++.+.+.+.+...+++++|+.+.+.++++++++
T Consensus       134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  213 (543)
T PLN02971        134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIK  213 (543)
T ss_pred             hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHH
Confidence            22222222345777889999999999666777777777788888888899988877654456689999999999999999


Q ss_pred             HhhccCccCCCCc--cchhHHHHHHHHHHHHHhhc---ccccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHh
Q 010479          187 RLGFGKRSDDNDE--ATSERSRLHALLREIQALSI---AFFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQELIDEH  261 (509)
Q Consensus       187 ~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  261 (509)
                      +++||.++...+.  ............+.......   ...+..++|++.++. ..+..+...+..+.+.+++...++++
T Consensus       214 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~  292 (543)
T PLN02971        214 RLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLD-LNGHEKIMRESSAIMDKYHDPIIDER  292 (543)
T ss_pred             HHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998743210  00011122222232222111   112334556554431 11223444555667788888888877


Q ss_pred             cCCcCCcccCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhh
Q 010479          262 LDPKRTKADMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSL  341 (509)
Q Consensus       262 ~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~  341 (509)
                      ++..+.+......|+++.|++..++++ ...+++++|++++.++++||+|||+++++|++++|+.||++|+|+|+||+++
T Consensus       293 ~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v  371 (543)
T PLN02971        293 IKMWREGKRTQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRV  371 (543)
T ss_pred             HHHHhccCCCCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            643222111112699999998654322 1249999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCCCCCCCCC
Q 010479          342 VGGNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWENPEEFNP  421 (509)
Q Consensus       342 ~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P  421 (509)
                      ++.+ +.++++++++|||++|||+||||++|++|..++|.+.+|++++||.||||+.|+++.|++||||++|+||++|+|
T Consensus       372 ~g~~-~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~P  450 (543)
T PLN02971        372 VGKE-RFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKP  450 (543)
T ss_pred             hCCC-CCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCc
Confidence            9865 789999999999999999999999999998788999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCC--CCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceecccceE
Q 010479          422 ERFIDRSID--FKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKKNFLV  499 (509)
Q Consensus       422 ~R~~~~~~~--~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (509)
                      |||+++..+  ....+..|+|||+|+|.|+|++||++|+++++++|+++|+|+.+++.  ...+..+.++ +...++++.
T Consensus       451 eRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~-~~~~~~~~~  527 (543)
T PLN02971        451 ERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSE--TRVELMESSH-DMFLSKPLV  527 (543)
T ss_pred             ccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCC--CCcchhhhcC-cccccccce
Confidence            999975322  11234679999999999999999999999999999999999987654  2355556566 666677999


Q ss_pred             EEEeec
Q 010479          500 LLAKYH  505 (509)
Q Consensus       500 ~~~~~r  505 (509)
                      +.+++|
T Consensus       528 ~~~~~~  533 (543)
T PLN02971        528 MVGELR  533 (543)
T ss_pred             eeeeec
Confidence            999998


No 5  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.7e-80  Score=608.19  Aligned_cols=477  Identities=43%  Similarity=0.840  Sum_probs=373.4

Q ss_pred             cccCCCCCCCCCCCCCCccccccCCCCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCCc
Q 010479           25 ITSRHASSLPPGPKGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPAL  104 (509)
Q Consensus        25 ~~~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~  104 (509)
                      ...++..+.||||+++|++||++.+...+++.++.+++++||++|++++++.+.|+++||+.+++++.++...+.+++..
T Consensus        22 ~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~  101 (502)
T PLN02966         22 KPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPH  101 (502)
T ss_pred             ccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCC
Confidence            34444567899999999999998874556889999999999999999999999999999999999999877667655543


Q ss_pred             cccceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHH
Q 010479          105 VATQRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLSCNT  184 (509)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~~~  184 (509)
                      ........+.....+..+|+.|+.+|+.++.++|+..++..+.+.++++++++++.|.+...+++++|+.+++..+++|+
T Consensus       102 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dv  181 (502)
T PLN02966        102 RGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSV  181 (502)
T ss_pred             ccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHH
Confidence            32222222222344556799999999997789999999999999999999999999987655567899999999999999


Q ss_pred             HhHhhccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHhcCC
Q 010479          185 ICRLGFGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQELIDEHLDP  264 (509)
Q Consensus       185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  264 (509)
                      ++.++||.+++..+   .....+.+.............+..++|++..+..+.+..+......+...+++.+.++++.+.
T Consensus       182 i~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  258 (502)
T PLN02966        182 VCRQAFGKKYNEDG---EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDP  258 (502)
T ss_pred             HHHHHhCCccCccc---hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999887532   122334444443333322222334455433222112222223344556666677777665432


Q ss_pred             cCCcccCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhhcCC
Q 010479          265 KRTKADMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSLVGG  344 (509)
Q Consensus       265 ~~~~~~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~~~~  344 (509)
                      .....+  ..|+++.|+++.++...+..++++++.++++++++||+|||+++++|++++|++||++|+|||+||+++++.
T Consensus       259 ~~~~~~--~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~  336 (502)
T PLN02966        259 KRVKPE--TESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKE  336 (502)
T ss_pred             cccccc--cccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcc
Confidence            211111  268999999876543223469999999999999999999999999999999999999999999999999875


Q ss_pred             C-CCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCC-CCCCCCCCC
Q 010479          345 N-KSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAW-ENPEEFNPE  422 (509)
Q Consensus       345 ~-~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~  422 (509)
                      + +..++++++++||||+|||+||||++|++++.++|.+.+|++++||.|||||.|.++.+++||||++| |||++|+||
T Consensus       337 ~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~Pe  416 (502)
T PLN02966        337 KGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPE  416 (502)
T ss_pred             cCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChh
Confidence            3 24579999999999999999999999999987789999999999999999999999999999999999 999999999


Q ss_pred             ccCCCCCCCCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceecccceEEEE
Q 010479          423 RFIDRSIDFKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKKNFLVLLA  502 (509)
Q Consensus       423 R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (509)
                      ||++++.+....+..|+|||+|+|.|+|++||++|+++++++|+++|+|++.++.+.+.+++.+..++...++++++++.
T Consensus       417 Rwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (502)
T PLN02966        417 RFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVP  496 (502)
T ss_pred             hhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEEE
Confidence            99975433223456799999999999999999999999999999999999887765455666677777776666777666


Q ss_pred             eecc
Q 010479          503 KYHE  506 (509)
Q Consensus       503 ~~r~  506 (509)
                      +|-+
T Consensus       497 ~~~~  500 (502)
T PLN02966        497 EKVN  500 (502)
T ss_pred             EeCC
Confidence            6543


No 6  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=2.2e-80  Score=608.92  Aligned_cols=476  Identities=37%  Similarity=0.741  Sum_probs=382.9

Q ss_pred             cccCCCCCCCCCCCCCCccccccCCCCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCCc
Q 010479           25 ITSRHASSLPPGPKGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPAL  104 (509)
Q Consensus        25 ~~~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~  104 (509)
                      +..++..+.||||.++|++||++.+ ..+++.++.+++++||+||++++|+.++++++||+++++++.++...|.+++..
T Consensus        27 ~~~~~~~~~pPgp~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~  105 (517)
T PLN02687         27 GSGKHKRPLPPGPRGWPVLGNLPQL-GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPN  105 (517)
T ss_pred             cCCCCCCCCCccCCCCCccccHHhc-CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCc
Confidence            3334455689999999999999887 566889999999999999999999999999999999999999877778777654


Q ss_pred             cccceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHH
Q 010479          105 VATQRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLSCNT  184 (509)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~~~  184 (509)
                      .....+...+.+.+++.+|+.|+++||.+..++|+..+++++.+.++++++++++.+.+.. +++++|+.+++..+++|+
T Consensus       106 ~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~~~vd~~~~~~~~t~dv  184 (517)
T PLN02687        106 SGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH-GTAPVNLGQLVNVCTTNA  184 (517)
T ss_pred             cchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHH
Confidence            3333333334567788789999999999544889999999999999999999999997642 356899999999999999


Q ss_pred             HhHhhccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHhcCC
Q 010479          185 ICRLGFGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQELIDEHLDP  264 (509)
Q Consensus       185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  264 (509)
                      ++.++||.++...+. ......+.+.................+|++.++.. ....++..+..+.+.+++.+.++++++.
T Consensus       185 i~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~  262 (517)
T PLN02687        185 LGRAMVGRRVFAGDG-DEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDL-QGVVGKMKRLHRRFDAMMNGIIEEHKAA  262 (517)
T ss_pred             HHHHHhCccccccCC-cchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999998754321 11334555555555443322222344565544321 1223455666778888899999888765


Q ss_pred             cCCcccCCcccHHHHHHHHHhhc---CCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhh
Q 010479          265 KRTKADMQQEDLIDVLLQIRKHR---GFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSL  341 (509)
Q Consensus       265 ~~~~~~~~~~d~~~~ll~~~~~~---~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~  341 (509)
                      ...+.. ...|+++.|++..++.   +.+..++++++++++.++++||+|||+++++|++++|++||++|+++++||+++
T Consensus       263 ~~~~~~-~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~  341 (517)
T PLN02687        263 GQTGSE-EHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAV  341 (517)
T ss_pred             ccccCc-ccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            332111 2269999999875432   112369999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCCCCCCCCC
Q 010479          342 VGGNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWENPEEFNP  421 (509)
Q Consensus       342 ~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P  421 (509)
                      .+.+ +.++++++++||||+|||+||||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|
T Consensus       342 ~~~~-~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~P  420 (517)
T PLN02687        342 VGRD-RLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRP  420 (517)
T ss_pred             cCCC-CCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCc
Confidence            8765 678999999999999999999999999998778999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCC----CCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceecccc
Q 010479          422 ERFIDRSID----FKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKKNF  497 (509)
Q Consensus       422 ~R~~~~~~~----~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (509)
                      |||++++..    ....+..++|||+|+|.|+|++||++|+++++++|+++|++++.++...++++....+++.+.++.+
T Consensus       421 eRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (517)
T PLN02687        421 DRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVP  500 (517)
T ss_pred             hhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCC
Confidence            999975321    1123467999999999999999999999999999999999998776433334444456667777789


Q ss_pred             eEEEEeecc
Q 010479          498 LVLLAKYHE  506 (509)
Q Consensus       498 ~~~~~~~r~  506 (509)
                      +++++++|.
T Consensus       501 ~~~~~~~R~  509 (517)
T PLN02687        501 LMVHPRPRL  509 (517)
T ss_pred             eEEeeccCC
Confidence            999999983


No 7  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2.3e-80  Score=608.60  Aligned_cols=470  Identities=41%  Similarity=0.798  Sum_probs=371.6

Q ss_pred             ccCCCCCCCCCCCCCCccccccCCCCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCCcc
Q 010479           26 TSRHASSLPPGPKGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPALV  105 (509)
Q Consensus        26 ~~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~  105 (509)
                      +.++..+.||||+++|++|+++.+ ....+.++.+++++||++|++++|+.++|+|+||+++++++.++...|+.++...
T Consensus        30 ~~~~~~~~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~  108 (516)
T PLN02183         30 RLRRRLPYPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANI  108 (516)
T ss_pred             hccCCCCCCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCccc
Confidence            333446789999999999998776 4456778999999999999999999999999999999999998777777766543


Q ss_pred             ccceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHH
Q 010479          106 ATQRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLSCNTI  185 (509)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~~~i  185 (509)
                      .......++.+.+++.+|+.|+++|+.++.++|+...++.+.+++ ++++.+++.+..  ..++++|+.+++..++++++
T Consensus       109 ~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~vi  185 (516)
T PLN02183        109 AISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSS--NIGKPVNIGELIFTLTRNIT  185 (516)
T ss_pred             chhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHh--cCCCcEeHHHHHHHHHHHHH
Confidence            322222223456777789999999998668899999999888864 688999998865  24678999999999999999


Q ss_pred             hHhhccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHhcCCc
Q 010479          186 CRLGFGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQELIDEHLDPK  265 (509)
Q Consensus       186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  265 (509)
                      ++++||.+.+.      ....+.+....+............+|++.++.. ....++..+..+.+.+++.+.++++++..
T Consensus       186 ~~~~fG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  258 (516)
T PLN02183        186 YRAAFGSSSNE------GQDEFIKILQEFSKLFGAFNVADFIPWLGWIDP-QGLNKRLVKARKSLDGFIDDIIDDHIQKR  258 (516)
T ss_pred             HhHhhcCcccc------hHHHHHHHHHHHHHHhCCccHHHhcchhHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999987653      223455555544443333233445565544321 12344556667778888888777665332


Q ss_pred             CCc-----ccCCcccHHHHHHHHHhhcC---------CCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHH
Q 010479          266 RTK-----ADMQQEDLIDVLLQIRKHRG---------FKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVM  331 (509)
Q Consensus       266 ~~~-----~~~~~~d~~~~ll~~~~~~~---------~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q  331 (509)
                      ..+     ......|+++.++++..+..         ....+++++++.++.++++||+|||+++++|++++|++||++|
T Consensus       259 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq  338 (516)
T PLN02183        259 KNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDL  338 (516)
T ss_pred             cccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHH
Confidence            111     11122689999998654321         1125999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCCCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCC
Q 010479          332 KKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPE  411 (509)
Q Consensus       332 ~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~  411 (509)
                      +|+|+||+++++.+ +.++++++++||||+|||+||||++|++|+. .|.+.+|++++||.|||||.|.++.+++||||+
T Consensus       339 ~kl~~Ei~~v~~~~-~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~  416 (516)
T PLN02183        339 KRVQQELADVVGLN-RRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKN  416 (516)
T ss_pred             HHHHHHHHHHcCCC-CCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCcc
Confidence            99999999999854 6789999999999999999999999999996 599999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCccCCCCC-CCCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCc
Q 010479          412 AWENPEEFNPERFIDRSI-DFKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGT  490 (509)
Q Consensus       412 ~~~dp~~F~P~R~~~~~~-~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~  490 (509)
                      +|+||++|+||||++++. +.......|+|||+|+|.|+|++||++|+++++|+|+++|+++..++...+.++....++.
T Consensus       417 ~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  496 (516)
T PLN02183        417 SWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGL  496 (516)
T ss_pred             ccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhcccc
Confidence            999999999999997543 2223456899999999999999999999999999999999999877653233444445555


Q ss_pred             ceecccceEEEEeecccC
Q 010479          491 TVHKKNFLVLLAKYHEYV  508 (509)
Q Consensus       491 ~~~~~~~~~~~~~~r~~~  508 (509)
                      ..++++++++.+++|.-|
T Consensus       497 ~~~~~~~~~~~~~~r~~~  514 (516)
T PLN02183        497 TAPRATRLVAVPTYRLQC  514 (516)
T ss_pred             ccccCCCcEEEeecCCCC
Confidence            555677999999999665


No 8  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1.6e-79  Score=598.87  Aligned_cols=492  Identities=33%  Similarity=0.653  Sum_probs=388.2

Q ss_pred             hHHHHHHHHhhHHHHHHHHHhccccCCCCCCCCCCCCCCccccccCCCCCCCcHHHHHHHHhhCCeEEEeecCccEEEec
Q 010479            3 LLIVMIILLCPPIFLFFVLRRHITSRHASSLPPGPKGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVS   82 (509)
Q Consensus         3 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~   82 (509)
                      +++-+.+..++.++..+.+++. ......+.||||+++|++||++.+ ...++.++.+++++||+|+++++|++++|+|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pPgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~   80 (504)
T PLN00110          3 LLLELAAATLLFFITRFFIRSL-LPKPSRKLPPGPRGWPLLGALPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVAS   80 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-hhcccCCCcccCCCCCeeechhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEEC
Confidence            3444444444445555555443 444566789999999999998776 55678899999999999999999999999999


Q ss_pred             CHHHHHHHHHHcCcCCCCCCCccccceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHH
Q 010479           83 SAKMAKETLKAHDLQFSGRPALVATQRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESIS  162 (509)
Q Consensus        83 dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~  162 (509)
                      ||+++++++.++...|..++..........++.+.+++.+|+.|+++|+.+...+|+..+++.+.+.+.+++..+++.+.
T Consensus        81 dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~  160 (504)
T PLN00110         81 TPEAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAML  160 (504)
T ss_pred             CHHHHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHH
Confidence            99999999998777777776543322222233456777789999999999545689999999999999999999999987


Q ss_pred             HhhhcCCcccHHHHHHHHHHHHHhHhhccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHH
Q 010479          163 KSAAASKQVNLSEIIMSLSCNTICRLGFGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRR  242 (509)
Q Consensus       163 ~~~~~~~~id~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~  242 (509)
                      +...+++++|+.+++..+++|+|+.++||.++...+  ......+...............+...+|++.|+.. ....++
T Consensus       161 ~~~~~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~-~~~~~~  237 (504)
T PLN00110        161 ELSQRGEPVVVPEMLTFSMANMIGQVILSRRVFETK--GSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDI-QGIERG  237 (504)
T ss_pred             HhccCCCcEeHHHHHHHHHHHHHHHHHhCCcccccC--chhHHHHHHHHHHHHHHhccccHHHHcchHhhhCc-chHHHH
Confidence            755567789999999999999999999999863211  11334566666555443322223345565554321 123344


Q ss_pred             HHHHHHhHHHHHHHHHHHhcCCcCCcccCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHH
Q 010479          243 LENNFQESDRFYQELIDEHLDPKRTKADMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMT  322 (509)
Q Consensus       243 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~  322 (509)
                      ..+..+.+.+++.+.++++++....+..  ..|+++.++++.+... +..++++++.++++++++||+|||+++++|+++
T Consensus       238 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~  314 (504)
T PLN00110        238 MKHLHKKFDKLLTRMIEEHTASAHERKG--NPDFLDVVMANQENST-GEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLA  314 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccc--CCChhhHHhhcccccC-CCCCCHHHHHHHHHhhhcccccchHHHHHHHHH
Confidence            5556777888888888877654322111  2689999997643221 246999999999999999999999999999999


Q ss_pred             HHhhChHHHHHHHHHHHhhcCCCCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEe
Q 010479          323 YLMKYPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVN  402 (509)
Q Consensus       323 ~l~~~p~~q~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~  402 (509)
                      +|++||++|+||++|++++++.+ ..++++++++||||+|||+||||++|++++.++|.+.+|++++||.||||+.|+++
T Consensus       315 ~L~~~P~~~~kl~~Ei~~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~  393 (504)
T PLN00110        315 EMLKNPSILKRAHEEMDQVIGRN-RRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVN  393 (504)
T ss_pred             HHHhCHHHHHHHHHHHHHHhCCC-CCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEe
Confidence            99999999999999999999865 67899999999999999999999999999877899999999999999999999999


Q ss_pred             hhhhccCCCCCCCCCCCCCCccCCCCCCCC---CCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCC
Q 010479          403 AWAIGRDPEAWENPEEFNPERFIDRSIDFK---GQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKK  479 (509)
Q Consensus       403 ~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~---~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~  479 (509)
                      .+++|+||++|+||++|+||||++++....   .....++|||+|+|.|+|++||++|+++++++|+++|++++.++.  
T Consensus       394 ~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~--  471 (504)
T PLN00110        394 IWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV--  471 (504)
T ss_pred             HHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC--
Confidence            999999999999999999999996532211   123579999999999999999999999999999999999987653  


Q ss_pred             CCCCccCcCCcceecccceEEEEeecc
Q 010479          480 QDLNFDSLSGTTVHKKNFLVLLAKYHE  506 (509)
Q Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~~~~r~  506 (509)
                       +.+.....+++..++.++.+++++|+
T Consensus       472 -~~~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        472 -ELNMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             -ccCcccccccccccCCCceEeeccCC
Confidence             23334456677888889999999983


No 9  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=4.9e-79  Score=600.81  Aligned_cols=481  Identities=35%  Similarity=0.634  Sum_probs=382.9

Q ss_pred             hccccCCCCCCCCCCCCCCccccccCCCCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCC
Q 010479           23 RHITSRHASSLPPGPKGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRP  102 (509)
Q Consensus        23 ~~~~~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~  102 (509)
                      .+.+.+++.+.||||+++|++||++.+ ..+++.++.+++++||++|++++++.+.++++||+++++++.++...|++++
T Consensus        23 ~~~~~~~~~~~ppgp~~~pl~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~  101 (514)
T PLN03112         23 LNASMRKSLRLPPGPPRWPIVGNLLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRP  101 (514)
T ss_pred             ccccccCCCCCccCCCCCCeeeeHHhc-CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCC
Confidence            334555666899999999999999887 5667889999999999999999999999999999999999988777787766


Q ss_pred             CccccceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHH
Q 010479          103 ALVATQRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLSC  182 (509)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~  182 (509)
                      .........++....+++.+|+.|+.+||.+..++|+..+++.+.+.+.++++.+++.+.+...+++++|+.+.+..+++
T Consensus       102 ~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~  181 (514)
T PLN03112        102 RTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSM  181 (514)
T ss_pred             CcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHH
Confidence            54332222222234566678999999999966778999999999999999999999987765555678999999999999


Q ss_pred             HHHhHhhccCccCCCCccc-hhHHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHh
Q 010479          183 NTICRLGFGKRSDDNDEAT-SERSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQELIDEH  261 (509)
Q Consensus       183 ~~i~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  261 (509)
                      ++++.++||.++...+... .....+..+...+............+|++.++.. ....++..+..+.+.+++...++++
T Consensus       182 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~  260 (514)
T PLN03112        182 NNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDP-YGCEKKMREVEKRVDEFHDKIIDEH  260 (514)
T ss_pred             HHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCc-ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999875432111 1234455555555433222223344565544321 1223455566777777888888776


Q ss_pred             cCCcCCcc-cCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHh
Q 010479          262 LDPKRTKA-DMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRS  340 (509)
Q Consensus       262 ~~~~~~~~-~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~  340 (509)
                      ++....+. .....|+++.++++..+++ ...++++++.++++++++||+|||+++++|++++|++||++|++||+||++
T Consensus       261 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~  339 (514)
T PLN03112        261 RRARSGKLPGGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDS  339 (514)
T ss_pred             HHhhcccccCCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            65322111 1122699999998654432 225999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCCCCCCCC
Q 010479          341 LVGGNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWENPEEFN  420 (509)
Q Consensus       341 ~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~  420 (509)
                      +++.+ +.++++++++||||+|||+||+|++|++++.++|.+.+|++++||.|||||.|.++.+++||||++|+||++||
T Consensus       340 ~~~~~-~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~  418 (514)
T PLN03112        340 VVGRN-RMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFR  418 (514)
T ss_pred             hcCCC-CcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcC
Confidence            99865 67899999999999999999999999999877899999999999999999999999999999999999999999


Q ss_pred             CCccCCCCCC----CCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceeccc
Q 010479          421 PERFIDRSID----FKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKKN  496 (509)
Q Consensus       421 P~R~~~~~~~----~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (509)
                      ||||.++...    ....+..++|||+|+|.|||++||++|+++++++|+++|++++.++...+++......++..++++
T Consensus       419 PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (514)
T PLN03112        419 PERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAK  498 (514)
T ss_pred             CcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCC
Confidence            9998753211    112346799999999999999999999999999999999999876543344555566778888888


Q ss_pred             ceEEEEeeccc
Q 010479          497 FLVLLAKYHEY  507 (509)
Q Consensus       497 ~~~~~~~~r~~  507 (509)
                      ++.+++.+|..
T Consensus       499 ~~~~~~~~r~~  509 (514)
T PLN03112        499 PLRAVATPRLA  509 (514)
T ss_pred             CeEEEeecCCc
Confidence            99999999953


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=6.1e-78  Score=591.92  Aligned_cols=474  Identities=26%  Similarity=0.457  Sum_probs=367.5

Q ss_pred             hccccCCCCCCCCCCCCCCccccccCCC--CCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCC
Q 010479           23 RHITSRHASSLPPGPKGLPFIGNLHQFD--VSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSG  100 (509)
Q Consensus        23 ~~~~~~~~~~~ppgp~~~p~lG~~~~~~--~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~  100 (509)
                      .....+...++||||+++|++||++.+.  ..+++.++.+++++||++|++++|+.+.|+++||+++++++.++...|+.
T Consensus        26 ~~~~~~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~  105 (519)
T PLN00168         26 GGRGGKKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALAD  105 (519)
T ss_pred             hccCCCCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCcccc
Confidence            3344455668899999999999987652  23467889999999999999999999999999999999999988777877


Q ss_pred             CCCccccceeccCCcceee-cCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHH
Q 010479          101 RPALVATQRLTYNGLELVF-SPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIIMS  179 (509)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~-~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~  179 (509)
                      ++.......++. +.+++. ..+|+.|+++||.++.++|+..+++.+.+.+.++++.+++.+.+....++.+|+.+.+..
T Consensus       106 rp~~~~~~~~~~-~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~  184 (519)
T PLN00168        106 RPAVASSRLLGE-SDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQY  184 (519)
T ss_pred             CCcccchhhhcc-CCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHH
Confidence            765432222221 122333 367999999998668999999999999999999999999999875544557899999999


Q ss_pred             HHHHHHhHhhccCccCCCCccchhHHHHHHHHHHHHHhh-cccccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHHH
Q 010479          180 LSCNTICRLGFGKRSDDNDEATSERSRLHALLREIQALS-IAFFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQELI  258 (509)
Q Consensus       180 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  258 (509)
                      ++.++++.++||.+++..     ....+........... ....+...+|.+.+.. .....++..+..+.+.+++...+
T Consensus       185 ~~~~ii~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i  258 (519)
T PLN00168        185 AMFCLLVLMCFGERLDEP-----AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHL-FRGRLQKALALRRRQKELFVPLI  258 (519)
T ss_pred             HHHHHHHHHHcCCCcChh-----hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhh-hhhHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999987631     2223333333221111 1122233445432211 11223445567778888888888


Q ss_pred             HHhcCCcCC----cc-c----CCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChH
Q 010479          259 DEHLDPKRT----KA-D----MQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPR  329 (509)
Q Consensus       259 ~~~~~~~~~----~~-~----~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~  329 (509)
                      +++++....    +. .    ....|+++.|++.......+..+++++++++++++++||+|||+++++|++++|++||+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~  338 (519)
T PLN00168        259 DARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPS  338 (519)
T ss_pred             HHHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHH
Confidence            877653210    00 0    01268999999865322212369999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccC
Q 010479          330 VMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRD  409 (509)
Q Consensus       330 ~q~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d  409 (509)
                      +|+|+|+||+++++++.+.++++++++||||+|||+||||++|+++..++|.+.+|++++||.||||+.|.++.+++|||
T Consensus       339 ~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d  418 (519)
T PLN00168        339 IQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRD  418 (519)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcC
Confidence            99999999999997654678999999999999999999999999998778999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccCCCCCC-----CCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCc
Q 010479          410 PEAWENPEEFNPERFIDRSID-----FKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNF  484 (509)
Q Consensus       410 ~~~~~dp~~F~P~R~~~~~~~-----~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~  484 (509)
                      |++||||++|+||||++++..     ....+..|+|||+|+|.|||++||++|+++++++|+++|+|++.++..   ++.
T Consensus       419 ~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~  495 (519)
T PLN00168        419 EREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDE---VDF  495 (519)
T ss_pred             ccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCc---CCh
Confidence            999999999999999974321     112245799999999999999999999999999999999999876532   232


Q ss_pred             cCcCCcceecccceEEEEeecc
Q 010479          485 DSLSGTTVHKKNFLVLLAKYHE  506 (509)
Q Consensus       485 ~~~~~~~~~~~~~~~~~~~~r~  506 (509)
                      ....+.+..+++++.+++++|+
T Consensus       496 ~~~~~~~~~~~~~~~~~~~~R~  517 (519)
T PLN00168        496 AEKREFTTVMAKPLRARLVPRR  517 (519)
T ss_pred             hhhceeEEeecCCcEEEEEecc
Confidence            2223445566778999999986


No 11 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=7.8e-78  Score=588.04  Aligned_cols=474  Identities=25%  Similarity=0.425  Sum_probs=365.2

Q ss_pred             HHhhHHHHHHHHHhccccCCCCCCCCCCCCCCccccccCCCCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHH
Q 010479           10 LLCPPIFLFFVLRRHITSRHASSLPPGPKGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKE   89 (509)
Q Consensus        10 ~l~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~   89 (509)
                      ++++.+++.+...+....+.+.+.+|||+++|++||++.+ ..+++..+.+++++||+||++++|+.++|+++||+++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~   85 (482)
T PTZ00404          7 ILFLFIFYIIHNAYKKYKKIHKNELKGPIPIPILGNLHQL-GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIRE   85 (482)
T ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCeeccHhhh-cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHH
Confidence            3333333443344444445667889999999999999887 557889999999999999999999999999999999999


Q ss_pred             HHHHcCcCCCCCCCccccceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhhcCC
Q 010479           90 TLKAHDLQFSGRPALVATQRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAAASK  169 (509)
Q Consensus        90 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~  169 (509)
                      ++.++...|..++.........+ +.+ +++.+|+.|+++|+. +.+.|+..+++.+.+.+.++++.+++.+.+....++
T Consensus        86 il~~~~~~~~~r~~~~~~~~~~~-~~~-l~~~~g~~w~~~Rk~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~  162 (482)
T PTZ00404         86 MFVDNFDNFSDRPKIPSIKHGTF-YHG-IVTSSGEYWKRNREI-VGKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGE  162 (482)
T ss_pred             HHHhcchhhcCCCCcceeeeecc-CCc-eeccChHHHHHHHHH-HHHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99977656665554433222111 344 445579999999999 689999999999999999999999999986555567


Q ss_pred             cccHHHHHHHHHHHHHhHhhccCccCCCCcc-chhHHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHHHH
Q 010479          170 QVNLSEIIMSLSCNTICRLGFGKRSDDNDEA-TSERSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENNFQ  248 (509)
Q Consensus       170 ~id~~~~~~~~~~~~i~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~  248 (509)
                      .+|+.+++..+++|+++.++||.+++..++. .+....+......+............++++....  ........+..+
T Consensus       163 ~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  240 (482)
T PTZ00404        163 TFEPRYYLTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY--YQYLEHTDKNFK  240 (482)
T ss_pred             ccCHHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh--HHHHHHHHHHHH
Confidence            8999999999999999999999987653211 1122445555555443322211222222221110  011222344566


Q ss_pred             hHHHHHHHHHHHhcCCcCCcccCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhCh
Q 010479          249 ESDRFYQELIDEHLDPKRTKADMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYP  328 (509)
Q Consensus       249 ~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p  328 (509)
                      .+.+++.+.++++++.....   .+.|+++.|+++..+.   .+...+++++++.++++||+|||+++++|++++|++||
T Consensus       241 ~~~~~~~~~i~~~~~~~~~~---~~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P  314 (482)
T PTZ00404        241 KIKKFIKEKYHEHLKTIDPE---VPRDLLDLLIKEYGTN---TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYP  314 (482)
T ss_pred             HHHHHHHHHHHHHHHccCCC---CcccHHHHHHHHhccC---CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCc
Confidence            77777777776655432211   1269999999864321   12334558999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCChhhcccchhHHHHHHHhhcCCCCCccccccccccccee-eceeeCCCCEEEEehhhhc
Q 010479          329 RVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIV-DGYEIPAKTIVYVNAWAIG  407 (509)
Q Consensus       329 ~~q~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i-~g~~ip~g~~v~~~~~~~~  407 (509)
                      ++|+||++||+++++++ ..++++++++||||+|||+||||+||++++.++|.+.+|+++ +||.||||+.|.++.+++|
T Consensus       315 ~vq~kl~~Ei~~v~~~~-~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~h  393 (482)
T PTZ00404        315 EIQEKAYNEIKSTVNGR-NKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLG  393 (482)
T ss_pred             HHHHHHHHHHHHHhcCC-CCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhh
Confidence            99999999999999875 568999999999999999999999999997678999999999 9999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCccCCCCCCCCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCc
Q 010479          408 RDPEAWENPEEFNPERFIDRSIDFKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSL  487 (509)
Q Consensus       408 ~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~  487 (509)
                      +||++||||++||||||++..     .+..|+|||+|+|.|+|++||++|+++++++|+++|+++.+++.+   ......
T Consensus       394 rdp~~~~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~  465 (482)
T PTZ00404        394 RNEKYFENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKK---IDETEE  465 (482)
T ss_pred             CCccccCCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCC---CCcccc
Confidence            999999999999999998742     245799999999999999999999999999999999999866532   222233


Q ss_pred             CCcceecccceEEEEeec
Q 010479          488 SGTTVHKKNFLVLLAKYH  505 (509)
Q Consensus       488 ~~~~~~~~~~~~~~~~~r  505 (509)
                      .++++. +.++.|++++|
T Consensus       466 ~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        466 YGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             cceeec-CCCceeeeecC
Confidence            455565 56789988877


No 12 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=2.4e-77  Score=587.74  Aligned_cols=467  Identities=31%  Similarity=0.566  Sum_probs=356.2

Q ss_pred             CCCCCCCCCCCCCccccccCCCCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCCccccc
Q 010479           29 HASSLPPGPKGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPALVATQ  108 (509)
Q Consensus        29 ~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~  108 (509)
                      ++.+.||||+++|++|+++.+.....+..+.+++++||+||++++|++++|+|+||+.+++++.++...+..++......
T Consensus        27 ~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~  106 (503)
T PLN02394         27 KKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD  106 (503)
T ss_pred             CcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHh
Confidence            45688999999999999977733335789999999999999999999999999999999999987766676655433333


Q ss_pred             eeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhh-cCCcccHHHHHHHHHHHHHhH
Q 010479          109 RLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAA-ASKQVNLSEIIMSLSCNTICR  187 (509)
Q Consensus       109 ~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~-~~~~id~~~~~~~~~~~~i~~  187 (509)
                      .....+.+.+++.+|+.|+++||.+..++|+..+++.+.+.++++++++++.+.+... .++.+|+.+++..+++|++++
T Consensus       107 ~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~  186 (503)
T PLN02394        107 IFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYR  186 (503)
T ss_pred             HhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHH
Confidence            2322244567777899999999995459999999999999999999999999976433 244689999999999999999


Q ss_pred             hhccCccCCCCccchhHHHHHHHHHHHHHhhcc--cccccccchhhhhhhhhcHHHHHHHHHHhHHH-HHHHHHHHhcCC
Q 010479          188 LGFGKRSDDNDEATSERSRLHALLREIQALSIA--FFVTDYFPFMGWIDKLTGMMRRLENNFQESDR-FYQELIDEHLDP  264 (509)
Q Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~  264 (509)
                      ++||.+++..++  .....+.............  ......+|++...  .....+..........+ +....++++++.
T Consensus       187 ~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  262 (503)
T PLN02394        187 MMFDRRFESEDD--PLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF--LRGYLKICQDVKERRLALFKDYFVDERKKL  262 (503)
T ss_pred             HHhCCCcccccc--hhHHHHHHHHHHHHHHhcccccchhhhchHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998875321  1222222222222211111  1122334443321  01111112222222222 223345554432


Q ss_pred             cCCc--ccCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhhc
Q 010479          265 KRTK--ADMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSLV  342 (509)
Q Consensus       265 ~~~~--~~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~~  342 (509)
                      .+..  ......|+++.|+++..++    .++++++..++.++++||+|||+++++|++++|++||++|++||+||++++
T Consensus       263 ~~~~~~~~~~~~d~l~~ll~~~~~~----~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~  338 (503)
T PLN02394        263 MSAKGMDKEGLKCAIDHILEAQKKG----EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVL  338 (503)
T ss_pred             hhhccCCcchhhhHHHHHHhccccC----CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence            1110  1111268999999875432    599999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCC
Q 010479          343 GGNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWENPEEFNPE  422 (509)
Q Consensus       343 ~~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~  422 (509)
                      +.+ ..++++++++||||+|||+||||++|++|+..+|.+.+|++++||.||+||.|.++.|++|+||++|+||++|+||
T Consensus       339 ~~~-~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~Pe  417 (503)
T PLN02394        339 GPG-NQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPE  417 (503)
T ss_pred             CCC-CCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCcc
Confidence            764 5689999999999999999999999999998889999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCC--CCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCC-cceecccceE
Q 010479          423 RFIDRSID--FKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSG-TTVHKKNFLV  499 (509)
Q Consensus       423 R~~~~~~~--~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  499 (509)
                      ||++++.+  .......++|||+|+|.|+|++||++|+++++|+|+++|++++.++.+  .++.....+ .....+.+++
T Consensus       418 Rwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  495 (503)
T PLN02394        418 RFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS--KIDVSEKGGQFSLHIAKHST  495 (503)
T ss_pred             ccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC--cCccccccCceeeccCCCce
Confidence            99975432  122346799999999999999999999999999999999999876642  244444443 4554666999


Q ss_pred             EEEeecc
Q 010479          500 LLAKYHE  506 (509)
Q Consensus       500 ~~~~~r~  506 (509)
                      +++.+|.
T Consensus       496 ~~~~~r~  502 (503)
T PLN02394        496 VVFKPRS  502 (503)
T ss_pred             EEeecCC
Confidence            9999985


No 13 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=5.3e-76  Score=570.93  Aligned_cols=458  Identities=26%  Similarity=0.455  Sum_probs=362.2

Q ss_pred             CCCCCCCCccccccCCCCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCCccccceeccC
Q 010479           34 PPGPKGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPALVATQRLTYN  113 (509)
Q Consensus        34 ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  113 (509)
                      ||||+++|++||++.+...+++.++.+++++||+||++++|+++.++|+||+++++++.++...|+.++.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            68999999999998874456889999999999999999999999999999999999999887777776544333222221


Q ss_pred             CcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhh--cCCcccHHHHHHHHHHHHHhHhhcc
Q 010479          114 GLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAA--ASKQVNLSEIIMSLSCNTICRLGFG  191 (509)
Q Consensus       114 ~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~--~~~~id~~~~~~~~~~~~i~~~~fG  191 (509)
                      +..+....+|+.|+++||.+..++++...++.+.+.+++.++.+++.+.+...  .++++|+.+.+..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            22234444689999999987788898888888999999999999888876533  3568999999999999999999999


Q ss_pred             CccCCCCccchh-----HHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHhcCCcC
Q 010479          192 KRSDDNDEATSE-----RSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQELIDEHLDPKR  266 (509)
Q Consensus       192 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  266 (509)
                      .+++........     .+.+......+........+...+|.+.+++. ....+...+....+.+++...++++++...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  239 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPN-KSFETRVQTTEFRRTAVMKALIKQQKKRIA  239 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            987653211000     12233333333333322233445676555431 112223333334455677777776665432


Q ss_pred             CcccCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhhcCCCC
Q 010479          267 TKADMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSLVGGNK  346 (509)
Q Consensus       267 ~~~~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~~~~~~  346 (509)
                      .+..  ..|+++.+++..      ..++++++.++++++++||+|||+++++|++++|++||++|+++|+||+++.+++ 
T Consensus       240 ~~~~--~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~-  310 (466)
T PLN02655        240 RGEE--RDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDE-  310 (466)
T ss_pred             CCCC--cccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC-
Confidence            2222  268999999753      2599999999999999999999999999999999999999999999999999864 


Q ss_pred             CCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccCC
Q 010479          347 SFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWENPEEFNPERFID  426 (509)
Q Consensus       347 ~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~  426 (509)
                       .++++++++||||+|||+||||++|+++.+.+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++
T Consensus       311 -~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~  389 (466)
T PLN02655        311 -RVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLG  389 (466)
T ss_pred             -CCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCC
Confidence             3999999999999999999999999999977899999999999999999999999999999999999999999999997


Q ss_pred             CCCCCCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceecccceEEEEeecc
Q 010479          427 RSIDFKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKKNFLVLLAKYHE  506 (509)
Q Consensus       427 ~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  506 (509)
                      .+... .....++|||+|+|.|||++||.+|+++++++||++|++++.++.. .   .....+++..+++++.|++++|.
T Consensus       390 ~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~r~  464 (466)
T PLN02655        390 EKYES-ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-E---KEDTVQLTTQKLHPLHAHLKPRG  464 (466)
T ss_pred             CCccc-CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-c---ccchhheeEeecCCcEEEEeecC
Confidence            54322 1246799999999999999999999999999999999999876642 1   12345677788899999999986


Q ss_pred             c
Q 010479          507 Y  507 (509)
Q Consensus       507 ~  507 (509)
                      .
T Consensus       465 ~  465 (466)
T PLN02655        465 S  465 (466)
T ss_pred             C
Confidence            5


No 14 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.7e-76  Score=582.96  Aligned_cols=458  Identities=24%  Similarity=0.393  Sum_probs=354.7

Q ss_pred             ccCCCCCCCCCCCCCCccccccCCCC------------------CCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHH
Q 010479           26 TSRHASSLPPGPKGLPFIGNLHQFDV------------------SKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMA   87 (509)
Q Consensus        26 ~~~~~~~~ppgp~~~p~lG~~~~~~~------------------~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~   87 (509)
                      +.+..++.||||+++|++||++.+..                  .+....+.+|+++||++|++|+|+.+.|+++||+++
T Consensus        36 ~~~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v  115 (516)
T PLN02290         36 KKIMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELI  115 (516)
T ss_pred             HHHHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHH
Confidence            33445677999999999999876521                  122345788999999999999999999999999999


Q ss_pred             HHHHHHcCcCCCCCCCccccceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhhc
Q 010479           88 KETLKAHDLQFSGRPALVATQRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAAA  167 (509)
Q Consensus        88 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~  167 (509)
                      ++++.++.. +..++...........|.++ +..+|+.|+++||. +.+.|+..+++.+.+.+.++++++++.+.+....
T Consensus       116 ~~il~~~~~-~~~r~~~~~~~~~~~~g~~l-~~~~g~~Wk~~Rk~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~  192 (516)
T PLN02290        116 KELLTKYNT-VTGKSWLQQQGTKHFIGRGL-LMANGADWYHQRHI-AAPAFMGDRLKGYAGHMVECTKQMLQSLQKAVES  192 (516)
T ss_pred             HHHHhcCCC-CCCCcchhhhHHHHHhcCCc-cccCchHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999997633 33333221111111124444 45579999999999 6899999999999999999999999999875443


Q ss_pred             C-CcccHHHHHHHHHHHHHhHhhccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHH
Q 010479          168 S-KQVNLSEIIMSLSCNTICRLGFGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENN  246 (509)
Q Consensus       168 ~-~~id~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~  246 (509)
                      + .++|+.+++..+++|++++++||.++...       +.+......+............+|++.+++.  +..+.....
T Consensus       193 ~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~--~~~~~~~~~  263 (516)
T PLN02290        193 GQTEVEIGEYMTRLTADIISRTEFDSSYEKG-------KQIFHLLTVLQRLCAQATRHLCFPGSRFFPS--KYNREIKSL  263 (516)
T ss_pred             CCceEEhHHHHHHHHHHHHHHHHcCCccccc-------hHHHHHHHHHHHHHHHhhhhhcCchhhhCCC--hhHHHHHHH
Confidence            3 57999999999999999999999987532       1122222222221111111112344333321  223445566


Q ss_pred             HHhHHHHHHHHHHHhcCCcCCcc-cCCcccHHHHHHHHHhhc-CCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHH
Q 010479          247 FQESDRFYQELIDEHLDPKRTKA-DMQQEDLIDVLLQIRKHR-GFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYL  324 (509)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~~~~~~-~~~~~d~~~~ll~~~~~~-~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l  324 (509)
                      .+.+.+++.+.++++++..+.+. .....|+++.++++..+. +.+..++++++.+++.++++||+|||+++++|++++|
T Consensus       264 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L  343 (516)
T PLN02290        264 KGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLL  343 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            77888888888888765432211 112279999999865432 1123589999999999999999999999999999999


Q ss_pred             hhChHHHHHHHHHHHhhcCCCCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehh
Q 010479          325 MKYPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAW  404 (509)
Q Consensus       325 ~~~p~~q~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~  404 (509)
                      ++||++|+|+|+||+++++++  .++++++++||||+|||+||||++|+++. ++|.+.+|++++||.|||||.|+++.+
T Consensus       344 ~~~P~vq~kl~~Ei~~v~~~~--~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~  420 (516)
T PLN02290        344 ASNPTWQDKVRAEVAEVCGGE--TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVL  420 (516)
T ss_pred             hcCHHHHHHHHHHHHHHhCCC--CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHH
Confidence            999999999999999999853  78999999999999999999999999996 689999999999999999999999999


Q ss_pred             hhccCCCCC-CCCCCCCCCccCCCCCCCCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCC
Q 010479          405 AIGRDPEAW-ENPEEFNPERFIDRSIDFKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLN  483 (509)
Q Consensus       405 ~~~~d~~~~-~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~  483 (509)
                      ++|+||++| +||++||||||++...   .....++|||.|+|.|+|++||++|+++++++|+++|++++.++.+     
T Consensus       421 ~~~rdp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~-----  492 (516)
T PLN02290        421 AIHHSEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR-----  492 (516)
T ss_pred             HhcCChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc-----
Confidence            999999999 8999999999995421   1235699999999999999999999999999999999999876532     


Q ss_pred             ccCcCCcceecccceEEEEeecc
Q 010479          484 FDSLSGTTVHKKNFLVLLAKYHE  506 (509)
Q Consensus       484 ~~~~~~~~~~~~~~~~~~~~~r~  506 (509)
                      .....+++..++++++|++++|+
T Consensus       493 ~~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        493 HAPVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             cCccceeeecCCCCCeEEEEeCC
Confidence            12223567788889999999986


No 15 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=7.4e-77  Score=574.72  Aligned_cols=455  Identities=29%  Similarity=0.505  Sum_probs=363.2

Q ss_pred             CCCCCCCCCCCCccccccCCCCC--CCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCCcc-c
Q 010479           30 ASSLPPGPKGLPFIGNLHQFDVS--KPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPALV-A  106 (509)
Q Consensus        30 ~~~~ppgp~~~p~lG~~~~~~~~--~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~-~  106 (509)
                      ....||||+++|++|+++.+...  +...++.++..+||++|+.|+|+.+.++++||+.+++|+.++.....+.+.+. .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            67789999999999999887433  55678899999999999999999999999999999999976655555555554 2


Q ss_pred             cceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHh
Q 010479          107 TQRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLSCNTIC  186 (509)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~~~i~  186 (509)
                      .....  |.+++++. |+.|+++||. +.+.|+...++.+.+.+.+++..+...+..... +..+|+.+.+.++++|+|+
T Consensus       113 ~~~~l--G~gll~~~-g~~W~~~Rk~-~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~~~~tld~i~  187 (497)
T KOG0157|consen  113 LKPWL--GDGLLFSD-GEKWHKHRKL-LTPAFHFEILKSFVPVFIESSLILLLLLELAAS-GEEVDLQDLLKRLTLDIIC  187 (497)
T ss_pred             HHHHh--cCccccCC-chHHHHHHhh-ccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeEcHHHHHHHHHHHHHH
Confidence            22222  55677776 9999999998 789999999999999999999988888776332 3339999999999999999


Q ss_pred             HhhccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccc-hhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHhcCCc
Q 010479          187 RLGFGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFP-FMGWIDKLTGMMRRLENNFQESDRFYQELIDEHLDPK  265 (509)
Q Consensus       187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  265 (509)
                      .++||......  ......++..++......+..   ....| +..++..+ ...++..++.+.+++++++.|.++++..
T Consensus       188 ~~~~G~~~~~~--~~~~~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~-~~~~~~~~a~~~~~~~~~~iI~~rr~~~  261 (497)
T KOG0157|consen  188 KTAMGPESLDA--EGPELFEYVQAFDDLTELISK---RINLPLGTKFLYGL-KSERKLKKARKILHDFLEKIIRERREEL  261 (497)
T ss_pred             HHhcCCccccc--cCCcccHHHHHHHHHHHHHHH---HHcCchhhhHHhhc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999222111  122333445555544333221   22334 33333333 2677888899999999999999888654


Q ss_pred             CCccc---CCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhhc
Q 010479          266 RTKAD---MQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSLV  342 (509)
Q Consensus       266 ~~~~~---~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~~  342 (509)
                      .....   ....|+++.+....+     ..+++++|++++.+|++||+||||++++|++++|+.||++|+++++|+++++
T Consensus       262 ~~~~~~~~~~~~d~L~~~~~~~~-----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~  336 (497)
T KOG0157|consen  262 EKEGSGEEKKRLDFLDTLLLEED-----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEIL  336 (497)
T ss_pred             HhcCCcccchhhhHHHHHHHhcc-----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence            32211   122677776332222     3799999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCChhhcccchhHHHHHHHhhcCCCCCccccccccccccee-eceeeCCCCEEEEehhhhccCCCCCC-CCCCCC
Q 010479          343 GGNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIV-DGYEIPAKTIVYVNAWAIGRDPEAWE-NPEEFN  420 (509)
Q Consensus       343 ~~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i-~g~~ip~g~~v~~~~~~~~~d~~~~~-dp~~F~  420 (509)
                      ++.+..++....++|+||++||+||||||||+|+. .|.+.+|+++ +||.||||+.|.++++++|||+.+|+ ||++||
T Consensus       337 ~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~-~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~  415 (497)
T KOG0157|consen  337 GNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLV-ARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFD  415 (497)
T ss_pred             CCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchh-hcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcC
Confidence            85534334444447999999999999999999985 6999999999 58999999999999999999999996 999999


Q ss_pred             CCccCCCCCCCCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceecccceEE
Q 010479          421 PERFIDRSIDFKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKKNFLVL  500 (509)
Q Consensus       421 P~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (509)
                      ||||+++.......++.|+|||+|+|.|+|++||++|+|+++++++++|+|+...+..     ......++.++++++.|
T Consensus       416 PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl~v  490 (497)
T KOG0157|consen  416 PERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----PKPVPELTLRPKNGLKV  490 (497)
T ss_pred             ccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----ceeeeEEEEEecCCeEE
Confidence            9999975433344568999999999999999999999999999999999999876632     45677889999999999


Q ss_pred             EEeecc
Q 010479          501 LAKYHE  506 (509)
Q Consensus       501 ~~~~r~  506 (509)
                      ++++|.
T Consensus       491 ~~~~r~  496 (497)
T KOG0157|consen  491 KLRPRG  496 (497)
T ss_pred             EEEeCC
Confidence            999985


No 16 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=3.1e-74  Score=562.26  Aligned_cols=471  Identities=24%  Similarity=0.441  Sum_probs=351.3

Q ss_pred             CCCCCCCCCCCCCCccccccCCCCCCC-cHHHHHHHHhh-CCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCCcc
Q 010479           28 RHASSLPPGPKGLPFIGNLHQFDVSKP-HVSFWELSKKY-GPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPALV  105 (509)
Q Consensus        28 ~~~~~~ppgp~~~p~lG~~~~~~~~~~-~~~~~~~~~ky-G~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~  105 (509)
                      .+..+.||||+++|++||++.+...++ ..++.+..++| |+||++++|++++|+|+||+.+++++.++...|+.++...
T Consensus        36 ~~~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~  115 (534)
T PLN03018         36 DRSRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLS  115 (534)
T ss_pred             CCCCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCch
Confidence            334458999999999999988633333 24566667766 7999999999999999999999999998777788776544


Q ss_pred             ccceeccCCcceeecCCChhHHHHHHHHHHhh-cchhhhhhchhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHH
Q 010479          106 ATQRLTYNGLELVFSPYGAYWREIRKICVIHL-FNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLSCNT  184 (509)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~-~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~~~  184 (509)
                      ....+..++.++.+..+|+.|+++|+.+ .+. ++......+.++.+++++++++.+.+..+.+.++|+.+++..+++++
T Consensus       116 ~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~v  194 (534)
T PLN03018        116 IMETIGDNYKSMGTSPYGEQFMKMKKVI-TTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAV  194 (534)
T ss_pred             hhhhhccCCCceEecCCCHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHH
Confidence            3332322233466666799999999995 555 45554555666666788999999886444456799999999999999


Q ss_pred             HhHhhccCccCCCCcc----chhHHHHHHHHHHHHHhhc---ccccccccc-hhhhhhhhhcHHHHHHHHHHhHHHHHHH
Q 010479          185 ICRLGFGKRSDDNDEA----TSERSRLHALLREIQALSI---AFFVTDYFP-FMGWIDKLTGMMRRLENNFQESDRFYQE  256 (509)
Q Consensus       185 i~~~~fG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~P-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (509)
                      +++++||.++...+..    ......+......+.....   .......+| ++.+.. +.....+.....+.+.+++.+
T Consensus       195 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~  273 (534)
T PLN03018        195 TMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWN-IDGQEERAKVNVNLVRSYNNP  273 (534)
T ss_pred             HHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhc-ccchHHHHHHHHHHHHHHHHH
Confidence            9999999987543210    0111112222222222111   111112223 222110 112233444456677788888


Q ss_pred             HHHHhcCCcCCc-ccCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHH
Q 010479          257 LIDEHLDPKRTK-ADMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQ  335 (509)
Q Consensus       257 ~i~~~~~~~~~~-~~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr  335 (509)
                      .++++++..+.. ......|+++.|++..++.+ ...+++++++.++.++++||+|||+++++|++++|+.||++|++++
T Consensus       274 ~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~  352 (534)
T PLN03018        274 IIDERVELWREKGGKAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKAL  352 (534)
T ss_pred             HHHHHHHHhhhccCCCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHH
Confidence            888776432211 11112699999998654432 1149999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCCC
Q 010479          336 EEIRSLVGGNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWEN  415 (509)
Q Consensus       336 ~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~d  415 (509)
                      +||+++++.+ +.++.+++++||||+|||+||||++|++|...+|.+.+|++++||.||||+.|+++.+++|+||++|+|
T Consensus       353 ~Ei~~v~~~~-~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~  431 (534)
T PLN03018        353 KELDEVVGKD-RLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKD  431 (534)
T ss_pred             HHHHHHhCCC-CCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCC
Confidence            9999999765 678999999999999999999999999998767999999999999999999999999999999999999


Q ss_pred             CCCCCCCccCCCCCCC-----CCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCc
Q 010479          416 PEEFNPERFIDRSIDF-----KGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGT  490 (509)
Q Consensus       416 p~~F~P~R~~~~~~~~-----~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~  490 (509)
                      |++|+||||+++++..     ......++|||+|+|.|||++||.+|+++++++|+++|++++.++..  +++.....++
T Consensus       432 p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~  509 (534)
T PLN03018        432 PLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFG--PLSLEEDDAS  509 (534)
T ss_pred             ccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCC--CCCccccccc
Confidence            9999999999753221     12346799999999999999999999999999999999999876531  2333333344


Q ss_pred             ceecccceEEEEeec
Q 010479          491 TVHKKNFLVLLAKYH  505 (509)
Q Consensus       491 ~~~~~~~~~~~~~~r  505 (509)
                      .. .+.++.|++++|
T Consensus       510 ~~-~p~~~~v~~~~R  523 (534)
T PLN03018        510 LL-MAKPLLLSVEPR  523 (534)
T ss_pred             ee-cCCCeEEEEEec
Confidence            44 456999999998


No 17 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3e-75  Score=527.88  Aligned_cols=456  Identities=24%  Similarity=0.415  Sum_probs=376.9

Q ss_pred             CCCCCCCCCCCCccccccCC---CCCCCcHHHHHHHHhhCCeEEEe-ecCccEEEecCHHHHHHHHHHcCcCCCCCC-Cc
Q 010479           30 ASSLPPGPKGLPFIGNLHQF---DVSKPHVSFWELSKKYGPLMSLR-LGFVPTLVVSSAKMAKETLKAHDLQFSGRP-AL  104 (509)
Q Consensus        30 ~~~~ppgp~~~p~lG~~~~~---~~~~~~~~~~~~~~kyG~v~~i~-~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~-~~  104 (509)
                      +...+|+|.++|++|.++.+   ...+.|+...+++++||+||+.. +|+...|.+.+|++++.++++++. ++.++ ..
T Consensus        48 ~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~  126 (519)
T KOG0159|consen   48 PFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLI  126 (519)
T ss_pred             ChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCccccc
Confidence            34577999999999998733   13567889999999999999999 888999999999999999998763 34443 11


Q ss_pred             ---cccceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhh---cCCcccHHHHHH
Q 010479          105 ---VATQRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAA---ASKQVNLSEIIM  178 (509)
Q Consensus       105 ---~~~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~---~~~~id~~~~~~  178 (509)
                         ...+.. +++...++..+|+.|.+.|..+....+.+++.+.|.|.+++.+++++..+....+   ...+.|+.+.+.
T Consensus       127 ~~w~~~rd~-~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~  205 (519)
T KOG0159|consen  127 EPWVAYRDF-RGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELY  205 (519)
T ss_pred             chhhhhHHh-hccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHH
Confidence               112222 2345566677899999999998888899999999999999999999999988765   234789999999


Q ss_pred             HHHHHHHhHhhccCccCCCCc-cchhHHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHH
Q 010479          179 SLSCNTICRLGFGKRSDDNDE-ATSERSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQEL  257 (509)
Q Consensus       179 ~~~~~~i~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (509)
                      ++++++||.++||.+++.++. ..+..+.+.+++..++.....+...  .++++++.  ++.++++.++++.+.++...+
T Consensus       206 ~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~--p~l~r~~~--t~~wk~~~~~~D~i~~~~~~~  281 (519)
T KOG0159|consen  206 RWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLM--PSLWRYFP--TKVWKDFVRAWDQIFDVGDKY  281 (519)
T ss_pred             HHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhc--chHHHhCC--ChHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999865 3456777888888777665442221  13444433  467899999999999999999


Q ss_pred             HHHhcCCcCCccc---CCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHH
Q 010479          258 IDEHLDPKRTKAD---MQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKV  334 (509)
Q Consensus       258 i~~~~~~~~~~~~---~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~l  334 (509)
                      |++..+..+.+..   .....+...|.+        .+++.+++..+++++++||.||||+++.|+||+|++||++|++|
T Consensus       282 Id~~l~~l~~~~~~~~~~~~~l~~~L~~--------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L  353 (519)
T KOG0159|consen  282 IDNALEELEKQDSAGSEYTGSLLELLLR--------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRL  353 (519)
T ss_pred             HHHHHHHHHhccccccchhHHHHHHHHH--------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHH
Confidence            9887665543222   111233333333        26999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCC
Q 010479          335 QEEIRSLVGGNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWE  414 (509)
Q Consensus       335 r~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~  414 (509)
                      ++|+.++.+..+..++.+++.+||||.||||||+||||.+|+. .|...+|..++||.|||||.|.++.+.+.+||++|+
T Consensus       354 ~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~-~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~  432 (519)
T KOG0159|consen  354 REEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN-GRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFP  432 (519)
T ss_pred             HHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc-ccccchhceeccceecCCCeEEEeehhhccChhhCC
Confidence            9999999988558899999999999999999999999999985 699999999999999999999999999999999999


Q ss_pred             CCCCCCCCccCCCCCCCCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceec
Q 010479          415 NPEEFNPERFIDRSIDFKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHK  494 (509)
Q Consensus       415 dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (509)
                      +|++|+||||++++. ...+++.++|||.|+|+|+|+++|++|+.++||+++++|+++..+..   +  ....+.....|
T Consensus       433 ~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~---p--v~~~~~~il~P  506 (519)
T KOG0159|consen  433 DPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE---P--VEYVYRFILVP  506 (519)
T ss_pred             CccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC---C--ccceeEEEEcC
Confidence            999999999998763 34567899999999999999999999999999999999999976642   2  23345556778


Q ss_pred             ccceEEEEeecc
Q 010479          495 KNFLVLLAKYHE  506 (509)
Q Consensus       495 ~~~~~~~~~~r~  506 (509)
                      ..++..++++|+
T Consensus       507 ~~~l~f~f~~r~  518 (519)
T KOG0159|consen  507 NRPLRFKFRPRN  518 (519)
T ss_pred             CCCcceeeeeCC
Confidence            889999999986


No 18 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=8.3e-75  Score=566.80  Aligned_cols=440  Identities=18%  Similarity=0.324  Sum_probs=335.0

Q ss_pred             cCCCCCCCCCCCCCCccccccCCCC----CCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCC
Q 010479           27 SRHASSLPPGPKGLPFIGNLHQFDV----SKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRP  102 (509)
Q Consensus        27 ~~~~~~~ppgp~~~p~lG~~~~~~~----~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~  102 (509)
                      ..++.+.||||+++|++||++.+..    ...++++.+++++||++|++++|++++|+++||+++++++.+++..|..+.
T Consensus        33 ~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~  112 (490)
T PLN02500         33 KQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSY  112 (490)
T ss_pred             ccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeC
Confidence            3455678999999999999764321    345678899999999999999999999999999999999998766564332


Q ss_pred             CccccceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhh-chhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHH
Q 010479          103 ALVATQRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQN-FRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLS  181 (509)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~  181 (509)
                      .... ... . |...++..+|+.|+++|+. +.+.|+..+++. +.+.+.+.+..+++.|.+    +..+|+.+.+..++
T Consensus       113 ~~~~-~~~-~-g~~~~~~~~g~~wr~~Rk~-~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~vd~~~~~~~~~  184 (490)
T PLN02500        113 PRSI-GGI-L-GKWSMLVLVGDMHRDMRSI-SLNFLSHARLRTHLLKEVERHTLLVLDSWKE----NSTFSAQDEAKKFT  184 (490)
T ss_pred             chHH-HHH-h-CcccccccCCHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHHHhCC----CCCEEehHHHHHHH
Confidence            1111 111 1 2223344479999999999 578899888876 567777777777776643    45799999999999


Q ss_pred             HHHHhHhhccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHh
Q 010479          182 CNTICRLGFGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQELIDEH  261 (509)
Q Consensus       182 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  261 (509)
                      ++++++++||.+.+..     ....+.............  ....+|..        ..++..+..+.+.+++.+.++++
T Consensus       185 ~~vi~~~~fg~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~~~~~~~~~i~~~  249 (490)
T PLN02500        185 FNLMAKHIMSMDPGEE-----ETEQLKKEYVTFMKGVVS--APLNFPGT--------AYRKALKSRATILKFIERKMEER  249 (490)
T ss_pred             HHHHHHHHhCCCCCch-----HHHHHHHHHHHHHhhhhc--chhcCCCc--------ccHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999875431     222333222222222111  11112321        12334456677888888888777


Q ss_pred             cCCcCCcc-cCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHh
Q 010479          262 LDPKRTKA-DMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRS  340 (509)
Q Consensus       262 ~~~~~~~~-~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~  340 (509)
                      ++..+.+. ...+.|+++.+++.       ..++++++++++.++++||+|||+++++|++++|++||++|+|+|+||++
T Consensus       250 ~~~~~~~~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~  322 (490)
T PLN02500        250 IEKLKEEDESVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLE  322 (490)
T ss_pred             HHhhhcccCCCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence            65332211 11226899999873       25999999999999999999999999999999999999999999999999


Q ss_pred             hcCC----CCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCCCC
Q 010479          341 LVGG----NKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWENP  416 (509)
Q Consensus       341 ~~~~----~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp  416 (509)
                      +.+.    ++..++++++++||||+|||+||||+||++|. ++|.+.+|++++||.||||+.|+++.|++||||++|+||
T Consensus       323 v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP  401 (490)
T PLN02500        323 IARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQP  401 (490)
T ss_pred             HhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCc
Confidence            8741    22468999999999999999999999999998 479999999999999999999999999999999999999


Q ss_pred             CCCCCCccCCCCCCCC------CCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCc
Q 010479          417 EEFNPERFIDRSIDFK------GQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGT  490 (509)
Q Consensus       417 ~~F~P~R~~~~~~~~~------~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~  490 (509)
                      ++||||||++++....      ..+..|+|||+|+|.|+|++||++|+++++++|+++|+|++.++..  ...   ... 
T Consensus       402 ~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~--~~~---~~~-  475 (490)
T PLN02500        402 QLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQ--AFA---FPF-  475 (490)
T ss_pred             cccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCc--cee---ccc-
Confidence            9999999997532211      1346799999999999999999999999999999999999876542  111   111 


Q ss_pred             ceecccceEEEEee
Q 010479          491 TVHKKNFLVLLAKY  504 (509)
Q Consensus       491 ~~~~~~~~~~~~~~  504 (509)
                      . .++.++.|++.+
T Consensus       476 ~-~~~~~l~~~~~~  488 (490)
T PLN02500        476 V-DFPKGLPIRVRR  488 (490)
T ss_pred             c-cCCCCceEEEEe
Confidence            2 234588887764


No 19 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.2e-74  Score=559.19  Aligned_cols=435  Identities=21%  Similarity=0.325  Sum_probs=338.8

Q ss_pred             ccCCCCCCCCCCCCCCccccccCCCCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCCcc
Q 010479           26 TSRHASSLPPGPKGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPALV  105 (509)
Q Consensus        26 ~~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~  105 (509)
                      +....++.||||+++|++||++.+ .+++..++.+++++||++|++++|++++++++||+++++++.++...+..+....
T Consensus        25 ~~~~r~~~ppgp~~~P~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~  103 (463)
T PLN02774         25 VRYSKKGLPPGTMGWPLFGETTEF-LKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQS  103 (463)
T ss_pred             hccCCCCCCCCCCCCCchhhHHHH-HHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHH
Confidence            334556788999999999998776 5566789999999999999999999999999999999999987665553322211


Q ss_pred             ccceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhh-chhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHH
Q 010479          106 ATQRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQN-FRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLSCNT  184 (509)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~~~  184 (509)
                      .. .. . |.+.+++.+|+.|+.+|+. +.+.|+...++. +.+.+.+.++++++.|..    ++++|+.+.+..+++++
T Consensus       104 ~~-~~-l-g~~~~~~~~g~~w~~~R~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~  175 (463)
T PLN02774        104 ML-DI-L-GTCNIAAVHGSTHRYMRGS-LLSLISPTMIRDHLLPKIDEFMRSHLSGWDG----LKTIDIQEKTKEMALLS  175 (463)
T ss_pred             HH-HH-h-CccchhhcCCHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHhhCC----CCCEEeeHHHHHHHHHH
Confidence            11 11 2 2334445579999999999 578899988876 788888888888877653    35799999999999999


Q ss_pred             HhHhhccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHhcCC
Q 010479          185 ICRLGFGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQELIDEHLDP  264 (509)
Q Consensus       185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  264 (509)
                      ++.++||.+.+.      ..+.+..........  .......+|.        ...++..++.+.+.+++.+.++++++.
T Consensus       176 ~~~~~~g~~~~~------~~~~~~~~~~~~~~~--~~~~~~~lp~--------~~~~~~~~~~~~~~~~~~~~i~~r~~~  239 (463)
T PLN02774        176 ALKQIAGTLSKP------ISEEFKTEFFKLVLG--TLSLPIDLPG--------TNYRSGVQARKNIVRMLRQLIQERRAS  239 (463)
T ss_pred             HHHHHcCCCChH------HHHHHHHHHHHHhcc--cccCCcCCCC--------hhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999975432      122222222222111  1111111221        123445567788888888888887653


Q ss_pred             cCCcccCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhhcCC
Q 010479          265 KRTKADMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSLVGG  344 (509)
Q Consensus       265 ~~~~~~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~~~~  344 (509)
                      ..     ..+|+++.|++...+   +..++++++.+++.++++||+|||+++++|++++|++||++|+++|+|++++.+.
T Consensus       240 ~~-----~~~d~l~~ll~~~~~---~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~  311 (463)
T PLN02774        240 GE-----THTDMLGYLMRKEGN---RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRER  311 (463)
T ss_pred             CC-----CcccHHHHHHhCccC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence            21     126999999974322   2359999999999999999999999999999999999999999999999999864


Q ss_pred             C--CCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCC
Q 010479          345 N--KSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWENPEEFNPE  422 (509)
Q Consensus       345 ~--~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~  422 (509)
                      .  ...++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||
T Consensus       312 ~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~Pe  390 (463)
T PLN02774        312 KRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPW  390 (463)
T ss_pred             cCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCch
Confidence            2  2568999999999999999999999999986 569999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceecccceEEEE
Q 010479          423 RFIDRSIDFKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKKNFLVLLA  502 (509)
Q Consensus       423 R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (509)
                      ||++++..   ....++|||+|+|.|||++||.+|++++++.|+++|+|++.++...  .   ...  ...+++++.|++
T Consensus       391 Rfl~~~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~--~---~~~--~~~p~~g~~~~~  460 (463)
T PLN02774        391 RWLDKSLE---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKL--M---KFP--RVEAPNGLHIRV  460 (463)
T ss_pred             hcCCCCcC---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcc--c---cCC--CCCCCCCceEEe
Confidence            99975321   1235999999999999999999999999999999999998765321  1   111  233678888887


Q ss_pred             ee
Q 010479          503 KY  504 (509)
Q Consensus       503 ~~  504 (509)
                      ++
T Consensus       461 ~~  462 (463)
T PLN02774        461 SP  462 (463)
T ss_pred             ee
Confidence            63


No 20 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=9.9e-75  Score=569.68  Aligned_cols=456  Identities=34%  Similarity=0.606  Sum_probs=361.9

Q ss_pred             CCCCCCCCccccccCCC-CCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCCccccce--e
Q 010479           34 PPGPKGLPFIGNLHQFD-VSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPALVATQR--L  110 (509)
Q Consensus        34 ppgp~~~p~lG~~~~~~-~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~--~  110 (509)
                      ||||+++|++||++.+. .++.++++.+++++||+||++++++.++++|+||+.+++++.++...++.++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999998874 25678889999999999999999999999999999999999987666655433222221  1


Q ss_pred             ccCCcceeecCCChhHHHHHHHHHHhhcchh-hhhhchhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHhHhh
Q 010479          111 TYNGLELVFSPYGAYWREIRKICVIHLFNSI-RAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLSCNTICRLG  189 (509)
Q Consensus       111 ~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~~~i~~~~  189 (509)
                      ...+.++ +..+++.|+.+|+. +.+.|+.. .+ .+.+.+++.++.+++.+.+.....+.+|+.+++..+++|+++.++
T Consensus        81 ~~~~~~l-~~~~~~~~~~~R~~-~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGGKGL-FFSDGERWRRQRRL-LAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTTTSS-TTSSHHHHHHHHHH-HHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             ccccccc-cccccccccccccc-ccccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            2224444 44457999999999 56777776 66 899999999999999999977666689999999999999999999


Q ss_pred             ccCccCCCCccchhHHHHHHHHHHHHHhhcc--cccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHhcCCcCC
Q 010479          190 FGKRSDDNDEATSERSRLHALLREIQALSIA--FFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQELIDEHLDPKRT  267 (509)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  267 (509)
                      ||.+++..++  .....+.+....+......  ..+...+|++.++.  ....+...++.+.+.+++.+.++++++..+.
T Consensus       158 fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (463)
T PF00067_consen  158 FGKDFGSLDD--EDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP--TPLFRRFKRARDRLRKYIKEIIEERREELDD  233 (463)
T ss_dssp             HSSHHHGTTH--HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHS
T ss_pred             ccceeeeccc--ccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccc
Confidence            9998875421  1233455555555443221  12233445444332  2345666677788889999999988876654


Q ss_pred             cccCCcccHHHHHHHHH-hhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhhcCCCC
Q 010479          268 KADMQQEDLIDVLLQIR-KHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSLVGGNK  346 (509)
Q Consensus       268 ~~~~~~~d~~~~ll~~~-~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~~~~~~  346 (509)
                      +.. ...|+++.++++. +.++ +..+++++++.+++.+++||+|||+.+++|++++|++||++|++||+||+++.+++ 
T Consensus       234 ~~~-~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-  310 (463)
T PF00067_consen  234 GDE-SRRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDG-  310 (463)
T ss_dssp             SSS-SCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTS-
T ss_pred             ccc-cccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence            411 2279999999987 3332 14799999999999999999999999999999999999999999999999999554 


Q ss_pred             CCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccCC
Q 010479          347 SFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWENPEEFNPERFID  426 (509)
Q Consensus       347 ~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~  426 (509)
                      ..++.+++++||||+|||+||||++|++++.++|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||++
T Consensus       311 ~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~  390 (463)
T PF00067_consen  311 REITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLD  390 (463)
T ss_dssp             SSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            68999999999999999999999999999667899999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceecccceEEEE
Q 010479          427 RSIDFKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKKNFLVLLA  502 (509)
Q Consensus       427 ~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (509)
                      .+.........|+|||.|+|.|||++||++|+++++++||++||+++.++....+ . ....++. .++.+++|.+
T Consensus       391 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~-~-~~~~~~~-~~~~~~~~~~  463 (463)
T PF00067_consen  391 ERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEP-Q-EQQNGFL-LPPKPLKVKF  463 (463)
T ss_dssp             TTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGE-E-ECSCSSS-EEESSSEEEE
T ss_pred             cccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCC-c-cccCceE-eeCCCcEEeC
Confidence            7653334567899999999999999999999999999999999999976543211 1 1122333 3445777764


No 21 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.1e-72  Score=549.68  Aligned_cols=452  Identities=19%  Similarity=0.331  Sum_probs=339.2

Q ss_pred             CCCCCCCCCccccccCCCCCC--CcHHHHHHHHhhCCeEE---EeecCccEEEecCHHHHHHHHHHcCcCCCCCCCcccc
Q 010479           33 LPPGPKGLPFIGNLHQFDVSK--PHVSFWELSKKYGPLMS---LRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPALVAT  107 (509)
Q Consensus        33 ~ppgp~~~p~lG~~~~~~~~~--~~~~~~~~~~kyG~v~~---i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~  107 (509)
                      ..|||+++|++||++.+....  ..+++.+...+||..++   +|+|+.++++|+||+++++|+.++...+.+++.....
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~  111 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI  111 (500)
T ss_pred             CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence            457888999999987653222  23444455555886655   6889999999999999999999876666665433222


Q ss_pred             ceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhh--chhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHH
Q 010479          108 QRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQN--FRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLSCNTI  185 (509)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~--~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~~~i  185 (509)
                      .  ...|.+++++ +|+.|+++||. +.+.|+...+..  +.+.++++++.+++.+.+...++.++|+.+.+.++++|+|
T Consensus       112 ~--~~~g~gl~~~-~g~~Wr~~Rk~-l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi  187 (500)
T PLN02169        112 F--DVLGEGILTV-DFELWEDLRKS-NHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTS  187 (500)
T ss_pred             H--HhhcCccccc-CcHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHH
Confidence            1  1225455544 69999999999 689999887664  2366777788888888765556678999999999999999


Q ss_pred             hHhhccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccchhhh-h-hhh-hcHHHHHHHHHHhHHHHHHHHHHHhc
Q 010479          186 CRLGFGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGW-I-DKL-TGMMRRLENNFQESDRFYQELIDEHL  262 (509)
Q Consensus       186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~  262 (509)
                      ++++||.+.+..+.. .....+............   ...+.|++.+ + .++ .+..++..++.+.+.+++.+.|++++
T Consensus       188 ~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~  263 (500)
T PLN02169        188 SILMTGYDPMSLSIE-MLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRR  263 (500)
T ss_pred             HhheeCCCccccCCC-CCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999987543211 112233333333222111   1122343221 1 111 23456677888889999999998876


Q ss_pred             CCcCC--cccCCcccHHHHHHHHHhhcC-CCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 010479          263 DPKRT--KADMQQEDLIDVLLQIRKHRG-FKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIR  339 (509)
Q Consensus       263 ~~~~~--~~~~~~~d~~~~ll~~~~~~~-~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~  339 (509)
                      +....  +.+....|+++.++++.+... ....++++++++++.++++||+|||+++++|++++|+.||++|+||++||+
T Consensus       264 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~  343 (500)
T PLN02169        264 KEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEIN  343 (500)
T ss_pred             HHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence            53211  111112689999997643211 012488999999999999999999999999999999999999999999998


Q ss_pred             hhcCCCCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccce-eeceeeCCCCEEEEehhhhccCCCCC-CCCC
Q 010479          340 SLVGGNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCI-VDGYEIPAKTIVYVNAWAIGRDPEAW-ENPE  417 (509)
Q Consensus       340 ~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~-i~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~  417 (509)
                      +++       +++++++||||+|||+||||+||++|... |.+.+|.+ ++||.||||+.|++++|++||||++| +||+
T Consensus       344 ~v~-------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~  415 (500)
T PLN02169        344 TKF-------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDAL  415 (500)
T ss_pred             hhC-------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChh
Confidence            764       57899999999999999999999999864 77666655 59999999999999999999999999 8999


Q ss_pred             CCCCCccCCCCCCCC-CCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceeccc
Q 010479          418 EFNPERFIDRSIDFK-GQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKKN  496 (509)
Q Consensus       418 ~F~P~R~~~~~~~~~-~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (509)
                      +||||||+++++... ..++.|+|||+|+|.|+|++||++|+++++++|+++|+++.+++.+   +  ....++++++++
T Consensus       416 ~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~---~--~~~~~~~l~~~~  490 (500)
T PLN02169        416 DFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHK---I--EAIPSILLRMKH  490 (500)
T ss_pred             hcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCC---c--ccccceEEecCC
Confidence            999999997543322 2357899999999999999999999999999999999998875432   2  234457788899


Q ss_pred             ceEEEEeec
Q 010479          497 FLVLLAKYH  505 (509)
Q Consensus       497 ~~~~~~~~r  505 (509)
                      ++.+++++|
T Consensus       491 gl~l~l~~~  499 (500)
T PLN02169        491 GLKVTVTKK  499 (500)
T ss_pred             CEEEEEEeC
Confidence            999999987


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=8.1e-73  Score=556.40  Aligned_cols=456  Identities=21%  Similarity=0.372  Sum_probs=339.9

Q ss_pred             CCCCCCCCccccccCCCCCCCcHHHHHHHHhh---CCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCCcccccee
Q 010479           34 PPGPKGLPFIGNLHQFDVSKPHVSFWELSKKY---GPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPALVATQRL  110 (509)
Q Consensus        34 ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~ky---G~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~  110 (509)
                      +|||+++|++||++.+. .+ +..+.++.++|   |++|++++|+.+.++++||+++++|+.++...+.+...+..... 
T Consensus        32 ~pgp~~~p~~G~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~-  108 (516)
T PLN03195         32 RKGPKSWPIIGAALEQL-KN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYME-  108 (516)
T ss_pred             cCCCCCCCeecchHHHH-hc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHH-
Confidence            68999999999986652 22 34566777777   89999999999999999999999999875444554432211111 


Q ss_pred             ccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhH-HHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHhHhh
Q 010479          111 TYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIR-EDEVSRMIESISKSAAASKQVNLSEIIMSLSCNTICRLG  189 (509)
Q Consensus       111 ~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~-~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~~~i~~~~  189 (509)
                      ...|.+ +++.+|+.|+++||. +++.|+..+++.+.+.+ ++.++.+.+.+.+...++.++|+.+++..+++|+++.++
T Consensus       109 ~~~g~~-l~~~~g~~w~~~Rr~-l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  186 (516)
T PLN03195        109 VLLGDG-IFNVDGELWRKQRKT-ASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVG  186 (516)
T ss_pred             HHhcCe-eeccCcHHHHHHHHh-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHH
Confidence            112444 455679999999999 68899999999998876 666777777776544456789999999999999999999


Q ss_pred             ccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccchhhhhhhh-hcHHHHHHHHHHhHHHHHHHHHHHhcCCcCCc
Q 010479          190 FGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGWIDKL-TGMMRRLENNFQESDRFYQELIDEHLDPKRTK  268 (509)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (509)
                      ||.+++..+... ....+....+........   ....|+......+ ....+...+..+.+.+++.+.++++++....+
T Consensus       187 fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (516)
T PLN03195        187 FGVEIGTLSPSL-PENPFAQAFDTANIIVTL---RFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEA  262 (516)
T ss_pred             hCCCccccccCC-CccHHHHHHHHHHHHHHH---HHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999887643211 112233333322211100   0011211110000 11223445567778888888887765432211


Q ss_pred             ---ccCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhhcCCC
Q 010479          269 ---ADMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSLVGGN  345 (509)
Q Consensus       269 ---~~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~~~~~  345 (509)
                         ......|+++.++++.++.  +..+++++++++++++++||+|||+++++|++++|++||++|+|||+||+++.++.
T Consensus       263 ~~~~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~  340 (516)
T PLN03195        263 RKSGKKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKER  340 (516)
T ss_pred             ccccccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcc
Confidence               1111268999999764432  23599999999999999999999999999999999999999999999999987431


Q ss_pred             -------------------CCCCChhhcccchhHHHHHHHhhcCCCCCccccccccccccee-eceeeCCCCEEEEehhh
Q 010479          346 -------------------KSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIV-DGYEIPAKTIVYVNAWA  405 (509)
Q Consensus       346 -------------------~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i-~g~~ip~g~~v~~~~~~  405 (509)
                                         .+.++++++++||||+|||+||||++|++|+. +|.+.+|.++ +|+.||||+.|.++.++
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~  419 (516)
T PLN03195        341 AKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYS  419 (516)
T ss_pred             cccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHh
Confidence                               24589999999999999999999999999996 5767776555 99999999999999999


Q ss_pred             hccCCCCC-CCCCCCCCCccCCCCCCCCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCc
Q 010479          406 IGRDPEAW-ENPEEFNPERFIDRSIDFKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNF  484 (509)
Q Consensus       406 ~~~d~~~~-~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~  484 (509)
                      +||||++| +||++|+||||++++......++.|+|||+|+|.|+|++||++|++++++.++++|++++.++.+   .. 
T Consensus       420 ~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~-  495 (516)
T PLN03195        420 MGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHP---VK-  495 (516)
T ss_pred             hccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCc---ce-
Confidence            99999999 99999999999964321222446799999999999999999999999999999999999865532   22 


Q ss_pred             cCcCCcceecccceEEEEeecc
Q 010479          485 DSLSGTTVHKKNFLVLLAKYHE  506 (509)
Q Consensus       485 ~~~~~~~~~~~~~~~~~~~~r~  506 (509)
                       .....+..++.++.|++++|.
T Consensus       496 -~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        496 -YRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             -eeeeeEEecCCCEEEEEEeCC
Confidence             223345678889999999884


No 23 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=2.1e-72  Score=554.74  Aligned_cols=443  Identities=24%  Similarity=0.426  Sum_probs=334.5

Q ss_pred             ccccCCCCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCCccccceeccCCcceeecCCC
Q 010479           44 GNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPALVATQRLTYNGLELVFSPYG  123 (509)
Q Consensus        44 G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (509)
                      ||+..+.++.++..+.++|++|||||++++|+.++++|+||+.+++|+..+...+.++.........  .+.++ ++.++
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~--~g~~l-~~~dg  219 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV--MGKGL-IPADG  219 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc--cCCce-ecCCc
Confidence            4444443456778899999999999999999999999999999999999776666654332111111  23344 45579


Q ss_pred             hhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHhHhhccCccCCCCccchh
Q 010479          124 AYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLSCNTICRLGFGKRSDDNDEATSE  203 (509)
Q Consensus       124 ~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~  203 (509)
                      +.|+.+|+. +.++|+...+..+.+.++++++++++.+.+...+++++|+.+.+..+++|+|+.++||.+++..++....
T Consensus       220 e~wr~rRr~-l~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~  298 (633)
T PLN02738        220 EIWRVRRRA-IVPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGI  298 (633)
T ss_pred             HHHHHHHHh-ccHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHH
Confidence            999999999 6899999999999999999999999999876666789999999999999999999999998764321112


Q ss_pred             HHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHhcC-------CcCCc-ccCCccc
Q 010479          204 RSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQELIDEHLD-------PKRTK-ADMQQED  275 (509)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~-~~~~~~d  275 (509)
                      ...+...+...............+|.+..+   ....++..+..+.+.++...+++.+++       ....+ ......|
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l---~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~d  375 (633)
T PLN02738        299 VEAVYTVLREAEDRSVSPIPVWEIPIWKDI---SPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPS  375 (633)
T ss_pred             HHHHHHHHHHHHHHhhcchhhhhhhHHhhh---chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccch
Confidence            222223222221111110111112222211   112233333444444444444433221       10000 0112258


Q ss_pred             HHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhhcCCCCCCCChhhcc
Q 010479          276 LIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSLVGGNKSFVDEDDVQ  355 (509)
Q Consensus       276 ~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~~~~~~~~~~~~~~~  355 (509)
                      +++.|++..      ..++++++.++++.+++||+|||+++++|++++|++||++|+|||+||++++++  ..+++++++
T Consensus       376 il~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~--~~~t~edL~  447 (633)
T PLN02738        376 ILHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD--RFPTIEDMK  447 (633)
T ss_pred             HHHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC--CCCCHHHHc
Confidence            999998642      259999999999999999999999999999999999999999999999999973  578999999


Q ss_pred             cchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccCCCCC--CCCC
Q 010479          356 ELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWENPEEFNPERFIDRSI--DFKG  433 (509)
Q Consensus       356 ~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~--~~~~  433 (509)
                      +||||+|||+|+|||||+++.. +|++.+|.+++||.|||||.|.++.|.+||||++||||++|+||||++.+.  ....
T Consensus       448 kLPYL~AVIkEtLRL~p~~p~~-~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~  526 (633)
T PLN02738        448 KLKYTTRVINESLRLYPQPPVL-IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETN  526 (633)
T ss_pred             cCHHHHHHHHHHHhcCCCcccc-ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccC
Confidence            9999999999999999999984 699999999999999999999999999999999999999999999985321  1122


Q ss_pred             CCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceecccceEEEEeecc
Q 010479          434 QNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKKNFLVLLAKYHE  506 (509)
Q Consensus       434 ~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  506 (509)
                      ....++|||.|+|.|+|++||++|+++++++|+++|+|++.++.+  ++..  ..+.+..+++++.|++++|.
T Consensus       527 ~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~--~~~~--~~~~~~~p~~~l~v~l~~R~  595 (633)
T PLN02738        527 QNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP--PVKM--TTGATIHTTEGLKMTVTRRT  595 (633)
T ss_pred             CCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC--Cccc--ccceEEeeCCCcEEEEEECC
Confidence            346799999999999999999999999999999999999876542  2222  23456777889999998883


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=2.9e-72  Score=543.81  Aligned_cols=433  Identities=22%  Similarity=0.368  Sum_probs=342.1

Q ss_pred             ccccCCCCCCCCCCCCCCccccccCCCCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCC
Q 010479           24 HITSRHASSLPPGPKGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPA  103 (509)
Q Consensus        24 ~~~~~~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~  103 (509)
                      +....++.+.||||+++|++||++.+..++++.++.+++++||++++++++++++|+++||+++++++.++...+.  +.
T Consensus        27 ~~~~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~  104 (463)
T PLN02196         27 RRSSSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PT  104 (463)
T ss_pred             ccCCCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--cc
Confidence            3444456678899999999999876546778899999999999999999999999999999999999987765553  22


Q ss_pred             ccccceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHH
Q 010479          104 LVATQRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLSCN  183 (509)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~~  183 (509)
                      ........ .|...++..+|+.|+++||. +.+.|+..+++.+.+.++++++++++.|.     ++.+|+.+++..++++
T Consensus       105 ~~~~~~~~-~g~~~l~~~~g~~w~~~Rk~-l~~~f~~~~l~~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~  177 (463)
T PLN02196        105 FPASKERM-LGKQAIFFHQGDYHAKLRKL-VLRAFMPDAIRNMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFN  177 (463)
T ss_pred             CchHHHHH-cCcccccccCcHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHH
Confidence            21111111 23334555679999999999 57889999999999999999999988774     3578999999999999


Q ss_pred             HHhHhhccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHhcC
Q 010479          184 TICRLGFGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQELIDEHLD  263 (509)
Q Consensus       184 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  263 (509)
                      +++.++||.+...      ....+......+....      ..+|+.  ++  ....++..++.+.+.+++.+.++++++
T Consensus       178 v~~~~~fG~~~~~------~~~~~~~~~~~~~~~~------~~~~~~--~p--~~~~~~~~~a~~~~~~~~~~~i~~~~~  241 (463)
T PLN02196        178 VALLSIFGKDEVL------YREDLKRCYYILEKGY------NSMPIN--LP--GTLFHKSMKARKELAQILAKILSKRRQ  241 (463)
T ss_pred             HHHHHHcCCCCch------HHHHHHHHHHHHhcch------hccccc--CC--CccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999987432      1122222222221111      012211  10  012344566777888889888888765


Q ss_pred             CcCCcccCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhhcC
Q 010479          264 PKRTKADMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSLVG  343 (509)
Q Consensus       264 ~~~~~~~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~~~  343 (509)
                      ...   +  ..|+++.++++   +   .+++++++.++++++++||+|||+++++|++++|++||++|++|++|++++.+
T Consensus       242 ~~~---~--~~d~l~~ll~~---~---~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~  310 (463)
T PLN02196        242 NGS---S--HNDLLGSFMGD---K---EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRK  310 (463)
T ss_pred             cCC---C--cccHHHHHHhc---C---CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc
Confidence            321   1  16899998853   1   25999999999999999999999999999999999999999999999999886


Q ss_pred             CC--CCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCCCCCCCCC
Q 010479          344 GN--KSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWENPEEFNP  421 (509)
Q Consensus       344 ~~--~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P  421 (509)
                      ..  ++.++++++++||||+|||+||||++|++++. .|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+|
T Consensus       311 ~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~P  389 (463)
T PLN02196        311 DKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDP  389 (463)
T ss_pred             ccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccCh
Confidence            42  35689999999999999999999999999986 5999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCCCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceecccceEEE
Q 010479          422 ERFIDRSIDFKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKKNFLVLL  501 (509)
Q Consensus       422 ~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (509)
                      |||++..     .+..++|||+|+|.|+|+++|++|++++++.|+++|++++.++..  ++.    ...+..|++.+.|+
T Consensus       390 eRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~----~~~~~~p~~~~~~~  458 (463)
T PLN02196        390 SRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN--GIQ----YGPFALPQNGLPIA  458 (463)
T ss_pred             hhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC--ceE----EcccccCCCCceEE
Confidence            9999632     245799999999999999999999999999999999999876532  122    22233467777777


Q ss_pred             Eee
Q 010479          502 AKY  504 (509)
Q Consensus       502 ~~~  504 (509)
                      ++.
T Consensus       459 ~~~  461 (463)
T PLN02196        459 LSR  461 (463)
T ss_pred             Eec
Confidence            653


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=9.4e-72  Score=539.62  Aligned_cols=439  Identities=22%  Similarity=0.321  Sum_probs=340.7

Q ss_pred             cCCCCCCCCCCCCCCccccccCCC----CCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCC
Q 010479           27 SRHASSLPPGPKGLPFIGNLHQFD----VSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRP  102 (509)
Q Consensus        27 ~~~~~~~ppgp~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~  102 (509)
                      ++++++.||||.++|++||++.+.    ..+++.++.+++++||+||++++|+.+.|+++||+++++++.+++..+..+.
T Consensus         2 ~~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~   81 (452)
T PLN03141          2 SKKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY   81 (452)
T ss_pred             CCCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence            356778899999999999987762    2457889999999999999999999999999999999999998776665442


Q ss_pred             CccccceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhh-chhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHH
Q 010479          103 ALVATQRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQN-FRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLS  181 (509)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~  181 (509)
                      .. .....  .|.+.++..+|+.|+++|+. +.+.|+..++.. +.+.+.+.+.++++.+.    .+..+|+.+.+..++
T Consensus        82 ~~-~~~~l--~g~~~~~~~~g~~wr~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  153 (452)
T PLN03141         82 PK-SLTEL--MGKSSILLINGSLQRRVHGL-IGAFLKSPHLKAQITRDMERYVSESLDSWR----DDPPVLVQDETKKIA  153 (452)
T ss_pred             ch-hHHHH--hCcccccccCcHHHHHHHHH-HHHhcCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCEEhHHHHHHHH
Confidence            21 11111  13334555679999999998 577787766655 34555555555555543    356799999999999


Q ss_pred             HHHHhHhhccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHh
Q 010479          182 CNTICRLGFGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQELIDEH  261 (509)
Q Consensus       182 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  261 (509)
                      ++++++++||.+...      ....+...+.........  +...+|..        ..++..++.+.+.+++.+.++++
T Consensus       154 ~~vi~~~~~G~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~l~~~~~~~i~~~  217 (452)
T PLN03141        154 FEVLVKALISLEPGE------EMEFLKKEFQEFIKGLMS--LPIKLPGT--------RLYRSLQAKKRMVKLVKKIIEEK  217 (452)
T ss_pred             HHHHHHHHcCCCchH------HHHHHHHHHHHHhhhHHh--CccCCCch--------HhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999976432      222333333322222111  11122221        12334456778888888888887


Q ss_pred             cCCcCCccc---CCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHH
Q 010479          262 LDPKRTKAD---MQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEI  338 (509)
Q Consensus       262 ~~~~~~~~~---~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei  338 (509)
                      +.....+..   ....|+++.++++..     ..+++++++.+++.+++||+|||+++++|++++|+.||++|+++++|+
T Consensus       218 ~~~~~~~~~~~~~~~~d~l~~ll~~~~-----~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei  292 (452)
T PLN03141        218 RRAMKNKEEDETGIPKDVVDVLLRDGS-----DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEEN  292 (452)
T ss_pred             HHHHhccCccccCChhhHHHHHHhcCC-----CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence            654322111   112689999987531     359999999999999999999999999999999999999999999999


Q ss_pred             HhhcC---CCCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCCC
Q 010479          339 RSLVG---GNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWEN  415 (509)
Q Consensus       339 ~~~~~---~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~d  415 (509)
                      +++.+   ..+..++.+++.+||||+|||+|++|+||+++. ++|.+.+|++++||.||||+.|+++.+++|+||++|+|
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~d  371 (452)
T PLN03141        293 MKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDN  371 (452)
T ss_pred             HHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCC
Confidence            98864   223568999999999999999999999999985 58999999999999999999999999999999999999


Q ss_pred             CCCCCCCccCCCCCCCCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceecc
Q 010479          416 PEEFNPERFIDRSIDFKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKK  495 (509)
Q Consensus       416 p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (509)
                      |++|+||||++++.    .+..|+|||+|+|.|+|++||++|++++++.|+++|+|+.+++..      .  ...+++++
T Consensus       372 P~~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~------~--~~~~~~~~  439 (452)
T PLN03141        372 PYQFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTI------V--NFPTVRMK  439 (452)
T ss_pred             ccccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCe------e--ecccccCC
Confidence            99999999997532    246799999999999999999999999999999999998765431      1  12467788


Q ss_pred             cceEEEEeeccc
Q 010479          496 NFLVLLAKYHEY  507 (509)
Q Consensus       496 ~~~~~~~~~r~~  507 (509)
                      .++.|++.+|.+
T Consensus       440 ~~~~~~~~~~~~  451 (452)
T PLN03141        440 RKLPIWVTRIDD  451 (452)
T ss_pred             CCceEEEEeCCC
Confidence            899999999975


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.3e-70  Score=540.04  Aligned_cols=442  Identities=22%  Similarity=0.335  Sum_probs=342.0

Q ss_pred             cCCCCCCCCCCCCCCccccccCCC----CCCCcHHHHHHHHhhCC--eEEEeecCccEEEecCHHHHHHHHHHcCcCCCC
Q 010479           27 SRHASSLPPGPKGLPFIGNLHQFD----VSKPHVSFWELSKKYGP--LMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSG  100 (509)
Q Consensus        27 ~~~~~~~ppgp~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~--v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~  100 (509)
                      .....+.||||+++|++|+++.+.    ..+++.++.+++++||+  ++++++++.+.++++||+++++++.+++ .|..
T Consensus        37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~  115 (490)
T PLN02302         37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEP  115 (490)
T ss_pred             ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-cccc
Confidence            344557899999999999987653    34678899999999997  7999999999999999999999998653 3443


Q ss_pred             CCCccccceeccCCcceeecCCChhHHHHHHHHHHhhc-chhhhhhchhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHH
Q 010479          101 RPALVATQRLTYNGLELVFSPYGAYWREIRKICVIHLF-NSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIIMS  179 (509)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~  179 (509)
                      +.......  .. |.+.+...+|+.|+++|+. +.+.| +..+++.+.+.+++++.++++.+..    .+.+|+.+.+..
T Consensus       116 ~~~~~~~~--~~-g~~~~~~~~g~~w~~~R~~-~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~  187 (490)
T PLN02302        116 GWPESTVE--LI-GRKSFVGITGEEHKRLRRL-TAAPVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTELRK  187 (490)
T ss_pred             CCchhHHH--Hh-ccccccccCcHHHHHHHHH-HHhccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHHHH
Confidence            32211111  11 3344445579999999999 56777 5778999999999999999988854    346999999999


Q ss_pred             HHHHHHhHhhccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHHHH
Q 010479          180 LSCNTICRLGFGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQELID  259 (509)
Q Consensus       180 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  259 (509)
                      ++++++++++||.+.+.      ..+.+.............  ....+|..        ..++..++.+.+.+++.+.++
T Consensus       188 ~~~~vi~~~~~G~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~l~~~~~~~i~  251 (490)
T PLN02302        188 LTFKIIMYIFLSSESEL------VMEALEREYTTLNYGVRA--MAINLPGF--------AYHRALKARKKLVALFQSIVD  251 (490)
T ss_pred             HHHHHHHHHHcCCCChH------HHHHHHHHHHHHHHHhhh--CCcCCCch--------hhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987543      222222222222111111  11122321        122334556677788888888


Q ss_pred             HhcCCcCCcccCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 010479          260 EHLDPKRTKADMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIR  339 (509)
Q Consensus       260 ~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~  339 (509)
                      ++++...........|+++.|+++.++.+  ..+++++++++++.+++||+|||+++++|++++|++||++|+|||+|++
T Consensus       252 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~  329 (490)
T PLN02302        252 ERRNSRKQNISPRKKDMLDLLLDAEDENG--RKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQE  329 (490)
T ss_pred             HHHHhhhccCCCCcCCHHHHHHhhhccCC--CCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            77654322211123799999998754432  3589999999999999999999999999999999999999999999999


Q ss_pred             hhcCCC---CCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCCCC
Q 010479          340 SLVGGN---KSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWENP  416 (509)
Q Consensus       340 ~~~~~~---~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp  416 (509)
                      +++++.   ...++++++++||||+|||+|+||++|++++. +|.+.+|++++||.||||+.|+++.+++|+||++|+||
T Consensus       330 ~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP  408 (490)
T PLN02302        330 EIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNP  408 (490)
T ss_pred             HHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCc
Confidence            998642   12378999999999999999999999999984 69999999999999999999999999999999999999


Q ss_pred             CCCCCCccCCCCCCCCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceeccc
Q 010479          417 EEFNPERFIDRSIDFKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKKN  496 (509)
Q Consensus       417 ~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (509)
                      ++|+||||++..    ..+..++|||+|+|.|+|++||.+|+++++++|+++|++++.++..  ++.    ......|+.
T Consensus       409 ~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~----~~~~~~p~~  478 (490)
T PLN02302        409 KEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC--KVM----YLPHPRPKD  478 (490)
T ss_pred             cccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC--cce----eCCCCCCCC
Confidence            999999999643    1345799999999999999999999999999999999999865421  122    112256677


Q ss_pred             ceEEEEeecc
Q 010479          497 FLVLLAKYHE  506 (509)
Q Consensus       497 ~~~~~~~~r~  506 (509)
                      ++.+++++|+
T Consensus       479 ~~~~~~~~~~  488 (490)
T PLN02302        479 NCLARITKVA  488 (490)
T ss_pred             CceEEEEecc
Confidence            8888888875


No 27 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=3.1e-70  Score=527.26  Aligned_cols=462  Identities=20%  Similarity=0.287  Sum_probs=343.0

Q ss_pred             ChhHHHHHHHHhhHHHHHHHHHhccccCCCCCCCCCCCCCCccccccCCC----CCCCcHHHHHHHHhhCCeEEEeecCc
Q 010479            1 MALLIVMIILLCPPIFLFFVLRRHITSRHASSLPPGPKGLPFIGNLHQFD----VSKPHVSFWELSKKYGPLMSLRLGFV   76 (509)
Q Consensus         1 ~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~v~~i~~~~~   76 (509)
                      ||..+.+.++..++.+ +..+.++.+ ..+.++||||.++|++||++.+.    ..++..++.+++++||++++++++++
T Consensus         1 ~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~   78 (472)
T PLN02987          1 MAFSAFLLLLSSLAAI-FFLLLRRTR-YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGE   78 (472)
T ss_pred             CcHHHHHHHHHHHHHH-HHHHHHhhc-cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCC
Confidence            4444444433333322 223333333 44557899999999999987652    24577889999999999999999999


Q ss_pred             cEEEecCHHHHHHHHHHcCcCCCCCCCccccceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchh-hHHHHHH
Q 010479           77 PTLVVSSAKMAKETLKAHDLQFSGRPALVATQRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRP-IREDEVS  155 (509)
Q Consensus        77 ~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~-~~~~~~~  155 (509)
                      +.++|+||+++++++.++...|..+........  .++.++.++ +|+.|+++|+. +.++++...+..+.. .+.+.++
T Consensus        79 ~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~--lg~~~l~~~-~g~~wr~~R~~-~~~f~~~~~~~~~~~~~~~~~~~  154 (472)
T PLN02987         79 PTVFSADPETNRFILQNEGKLFECSYPGSISNL--LGKHSLLLM-KGNLHKKMHSL-TMSFANSSIIKDHLLLDIDRLIR  154 (472)
T ss_pred             CeEEEeCHHHHHHHHhCCCceEEecCcHHHHHH--hCccccccc-CcHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHH
Confidence            999999999999999987766654432111111  123344444 79999999998 455444444444321 1222333


Q ss_pred             HHHHHHHHhhhcCCcccHHHHHHHHHHHHHhHhhccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccchhhhhhh
Q 010479          156 RMIESISKSAAASKQVNLSEIIMSLSCNTICRLGFGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGWIDK  235 (509)
Q Consensus       156 ~l~~~l~~~~~~~~~id~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~  235 (509)
                      ..++.|.      +++++.+.+..++++++++++||.+...      ..+.+...........    ....+|++     
T Consensus       155 ~~~~~~~------~~v~~~~~~~~~t~~vi~~~~fg~~~~~------~~~~~~~~~~~~~~~~----~~~~~p~l-----  213 (472)
T PLN02987        155 FNLDSWS------SRVLLMEEAKKITFELTVKQLMSFDPGE------WTESLRKEYVLVIEGF----FSVPLPLF-----  213 (472)
T ss_pred             HHHHhhc------cceehHHHHHHHHHHHHHHHHcCCCChH------HHHHHHHHHHHHHhhh----hcCCCcCC-----
Confidence            3333331      3689999999999999999999976542      1222222222222111    11223432     


Q ss_pred             hhcHHHHHHHHHHhHHHHHHHHHHHhcCCcCCcccCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHH
Q 010479          236 LTGMMRRLENNFQESDRFYQELIDEHLDPKRTKADMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAA  315 (509)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~  315 (509)
                       ....++..++.+++.+++.+.++++++....+.. ..+|+++.|++..      .++++++++++++++++||+|||++
T Consensus       214 -~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~-~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~  285 (472)
T PLN02987        214 -STTYRRAIQARTKVAEALTLVVMKRRKEEEEGAE-KKKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTST  285 (472)
T ss_pred             -CchHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-ccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHH
Confidence             1234566778888899999999888764332211 2269999999752      1599999999999999999999999


Q ss_pred             HHHHHHHHHhhChHHHHHHHHHHHhhcCC--CCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceee
Q 010479          316 TMVWTMTYLMKYPRVMKKVQEEIRSLVGG--NKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEI  393 (509)
Q Consensus       316 ~l~~~l~~l~~~p~~q~~lr~Ei~~~~~~--~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~i  393 (509)
                      +++|++++|+.||++|+++++|++++.+.  +...++++++.+|||++||++||||++|+++. ++|.+.+|++++||.|
T Consensus       286 ~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~i  364 (472)
T PLN02987        286 IMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTI  364 (472)
T ss_pred             HHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEE
Confidence            99999999999999999999999998752  22567899999999999999999999999985 5799999999999999


Q ss_pred             CCCCEEEEehhhhccCCCCCCCCCCCCCCccCCCCCCCCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeec
Q 010479          394 PAKTIVYVNAWAIGRDPEAWENPEEFNPERFIDRSIDFKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEM  473 (509)
Q Consensus       394 p~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~  473 (509)
                      |||+.|+++.+++|+||++|+||++||||||++..... ..+..++|||+|+|.|||++||.+|++++++.|+++|++++
T Consensus       365 p~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~-~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~  443 (472)
T PLN02987        365 PKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTT-VPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVP  443 (472)
T ss_pred             CCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCC-CCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEE
Confidence            99999999999999999999999999999999753321 23457999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCccCcCCcceecccceEEEEeecc
Q 010479          474 PPGMKKQDLNFDSLSGTTVHKKNFLVLLAKYHE  506 (509)
Q Consensus       474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  506 (509)
                      +++.+   ..+    ..+..+.+++.+++++|.
T Consensus       444 ~~~~~---~~~----~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        444 AEQDK---LVF----FPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             CCCCc---eee----cccccCCCCceEEEEecc
Confidence            76532   222    336777888999999983


No 28 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.2e-70  Score=535.61  Aligned_cols=453  Identities=23%  Similarity=0.367  Sum_probs=349.0

Q ss_pred             CCCCCCCCCCccccccCCC----CCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCCcccc
Q 010479           32 SLPPGPKGLPFIGNLHQFD----VSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPALVAT  107 (509)
Q Consensus        32 ~~ppgp~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~  107 (509)
                      ++=.|-.+||++|..+.+.    ++.++..+.+++++||+|+++++|+.+.++++||+++++++++.+..|.+++.....
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~   91 (489)
T PLN02936         12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVS   91 (489)
T ss_pred             ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhh
Confidence            3447788999999976653    466788999999999999999999999999999999999998766666655432211


Q ss_pred             ceeccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchh-hHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHh
Q 010479          108 QRLTYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRP-IREDEVSRMIESISKSAAASKQVNLSEIIMSLSCNTIC  186 (509)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~~~i~  186 (509)
                      ..  ..|.+ ++..+|+.|+++||. +++.|+..++..+.+ ++.++++.+++.+.+...++.++|+.+++..+++++++
T Consensus        92 ~~--~~~~~-i~~~~g~~wk~~Rk~-l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~  167 (489)
T PLN02936         92 EF--LFGSG-FAIAEGELWTARRRA-VVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIG  167 (489)
T ss_pred             HH--HhcCc-cccCCchHHHHHHHh-hcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Confidence            11  12333 444579999999999 688999888888654 78889999999998765566789999999999999999


Q ss_pred             HhhccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccchhhh--hhhhhcHHHHHHHHHHhHHHHHHHHHHHhcCC
Q 010479          187 RLGFGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGW--IDKLTGMMRRLENNFQESDRFYQELIDEHLDP  264 (509)
Q Consensus       187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  264 (509)
                      .++||.+++..+...    ++...+......... .....+|++.+  +..+.+..++..++.+.+.+++.+.++++++.
T Consensus       168 ~~~fG~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~  242 (489)
T PLN02936        168 LSVFNYNFDSLTTDS----PVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEI  242 (489)
T ss_pred             HHHcCCCccccccCc----HHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999988643221    222222222111111 11122333211  11111234456666777777777777665432


Q ss_pred             cCCc------c---cCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHH
Q 010479          265 KRTK------A---DMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQ  335 (509)
Q Consensus       265 ~~~~------~---~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr  335 (509)
                      .+..      .   .....|+++.|++..      ..++.+++.++++++++||+|||+++++|++++|++||++|++||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~------~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~  316 (489)
T PLN02936        243 VEAEGEVIEGEEYVNDSDPSVLRFLLASR------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQ  316 (489)
T ss_pred             HhhcccccccccccccCchHHHHHHHhcc------ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            1110      0   012268999998643      148999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCCC
Q 010479          336 EEIRSLVGGNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWEN  415 (509)
Q Consensus       336 ~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~d  415 (509)
                      +||++++++  ..++++++++||||+|||+||||++|+++...+|.+.+|+.++||.||+|+.|+++.+++|+||++|||
T Consensus       317 ~Ei~~~~~~--~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~d  394 (489)
T PLN02936        317 EELDRVLQG--RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWER  394 (489)
T ss_pred             HHHHHHhcC--CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCC
Confidence            999999875  457899999999999999999999999999876766777888999999999999999999999999999


Q ss_pred             CCCCCCCccCCCCCC--CCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCccee
Q 010479          416 PEEFNPERFIDRSID--FKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVH  493 (509)
Q Consensus       416 p~~F~P~R~~~~~~~--~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (509)
                      |++|+||||++++..  ....+..++|||.|+|.|||++||++|+++++++|+++|+++++++.+   +.  ...+.+.+
T Consensus       395 P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~---~~--~~~~~~~~  469 (489)
T PLN02936        395 AEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQD---IV--MTTGATIH  469 (489)
T ss_pred             ccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCc---cc--eecceEEe
Confidence            999999999964321  122235799999999999999999999999999999999999876532   22  22345666


Q ss_pred             cccceEEEEeecc
Q 010479          494 KKNFLVLLAKYHE  506 (509)
Q Consensus       494 ~~~~~~~~~~~r~  506 (509)
                      ++.++.|++++|.
T Consensus       470 ~~~~~~v~~~~R~  482 (489)
T PLN02936        470 TTNGLYMTVSRRR  482 (489)
T ss_pred             eCCCeEEEEEeee
Confidence            7889999999985


No 29 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.4e-70  Score=480.49  Aligned_cols=444  Identities=22%  Similarity=0.370  Sum_probs=358.7

Q ss_pred             CCCCCC-CCCCccccccCCCCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCCcccccee
Q 010479           32 SLPPGP-KGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPALVATQRL  110 (509)
Q Consensus        32 ~~ppgp-~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~  110 (509)
                      ..||.- .++|++|+...| ++++.+++++.++|||+||++.++|+.+.++.+|+....++++....++....+......
T Consensus        31 ~~PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~  109 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTP  109 (486)
T ss_pred             CCCcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhh
Confidence            566664 468999999998 999999999999999999999999999999999999999998764444433333222111


Q ss_pred             ccCCcceeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHH-HHHhhhcCCcccHHHHHHHHHHHHHhHhh
Q 010479          111 TYNGLELVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIES-ISKSAAASKQVNLSEIIMSLSCNTICRLG  189 (509)
Q Consensus       111 ~~~~~~~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~~~id~~~~~~~~~~~~i~~~~  189 (509)
                      . .|.+.+....+....++.+. ....+...+++++.+.|.++..+++.. +.+   ++....+.++...+++.+...++
T Consensus       110 v-Fg~~v~~d~~~~~~~e~~~~-~k~~L~~~~lk~~~e~m~~el~~~f~~~~~~---s~~~d~l~~~~~~ii~tAs~~ll  184 (486)
T KOG0684|consen  110 V-FGKGVVYDVPNHVMMEQKKF-FKSALGGVALKSLVELMLEELHAYFETSLGE---SGETDGLYTFCRLIIFTASRLLL  184 (486)
T ss_pred             h-cCCCccccCCCchHHHHHHH-HHHHhchhhHHHHHHHHHHHHHHHHhccccc---ccchhHhhhhhHHHhhhhHHHhh
Confidence            2 25667777777777788787 577888999999999999999999887 443   66777888999999999988888


Q ss_pred             ccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccc-hhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHhcCCcCCc
Q 010479          190 FGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFP-FMGWIDKLTGMMRRLENNFQESDRFYQELIDEHLDPKRTK  268 (509)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (509)
                      ||......      ++.......++.+.+..  +...|| ++.+     ...++..++.+++.+.+...+.++++..+. 
T Consensus       185 ~~e~r~~~------d~~~a~l~~dLd~~F~~--~d~~FP~~LP~-----~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~-  250 (486)
T KOG0684|consen  185 GGEVRDQL------DADVAKLYHDLDQGFQP--FDFLFPYNLPI-----PLLRRRDRARKKISKIFSKIILDRRASISK-  250 (486)
T ss_pred             hhhhhhhh------cchHHHHHHHHhccccc--hHhhcccCCCc-----chhhhHHHHHHHHHHHHHHHHHHHHhcccc-
Confidence            98866653      22333333333333222  233455 2221     345666688899999999999888876432 


Q ss_pred             ccCCcccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhhcCCCCCC
Q 010479          269 ADMQQEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSLVGGNKSF  348 (509)
Q Consensus       269 ~~~~~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~~~~~~~~  348 (509)
                         ...|++..+++- .+.|  ...+++|+....+.+++||+.||+.|.+|++++|++|||+++.+++|+..++|++...
T Consensus       251 ---~~~dmlq~l~~~-y~dg--~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~  324 (486)
T KOG0684|consen  251 ---WDNDMLQSLMEK-YKDG--RPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEK  324 (486)
T ss_pred             ---ccHHHHHHHHHH-hhcC--CcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCC
Confidence               226899999883 3332  4799999999999999999999999999999999999999999999999999988666


Q ss_pred             CChhhcccchhHHHHHHHhhcCCCCCcccccccccccceeec----eeeCCCCEEEEehhhhccCCCCCCCCCCCCCCcc
Q 010479          349 VDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDG----YEIPAKTIVYVNAWAIGRDPEAWENPEEFNPERF  424 (509)
Q Consensus       349 ~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g----~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~  424 (509)
                      ++++.+++||.|++||+|||||+||.+.. .|.+.+|.++.+    |.||+|..|.++++.+|+||++|+||+.|+|+||
T Consensus       325 l~~d~L~~lplL~~~IkEtLRL~~p~~~~-~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf  403 (486)
T KOG0684|consen  325 LTYDQLKDLPLLDSCIKETLRLHPPAHSL-MRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRF  403 (486)
T ss_pred             CCHHHHhcchHHHHHHHHHHhcCCchhhH-HHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhc
Confidence            99999999999999999999999998885 599999999965    9999999999999999999999999999999999


Q ss_pred             CCCCCCC--CCC--CceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceecccceEE
Q 010479          425 IDRSIDF--KGQ--NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKKNFLVL  500 (509)
Q Consensus       425 ~~~~~~~--~~~--~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (509)
                      ++++++.  .+.  .+-++|||+|.|.|||+.||.+|+|.+++.+|++||++++++ +.+++++..   ..+.|.+++++
T Consensus       404 ~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d~s~---~v~~P~g~v~i  479 (486)
T KOG0684|consen  404 LKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVDYSR---MVMQPEGDVRI  479 (486)
T ss_pred             cCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCCHHH---hhcCCCCCceE
Confidence            9655332  222  234699999999999999999999999999999999999987 334445433   37788999999


Q ss_pred             EEeecc
Q 010479          501 LAKYHE  506 (509)
Q Consensus       501 ~~~~r~  506 (509)
                      ++|.|+
T Consensus       480 rYK~R~  485 (486)
T KOG0684|consen  480 RYKRRP  485 (486)
T ss_pred             EEeecC
Confidence            999985


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=8.7e-68  Score=514.24  Aligned_cols=444  Identities=20%  Similarity=0.292  Sum_probs=336.9

Q ss_pred             CCccccccCCCCCCCcHHHHHHHHhhC-CeEEEeecCccEEEecCHHHHHHHHHHcCcCCCCCCCccccceeccCCccee
Q 010479           40 LPFIGNLHQFDVSKPHVSFWELSKKYG-PLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFSGRPALVATQRLTYNGLELV  118 (509)
Q Consensus        40 ~p~lG~~~~~~~~~~~~~~~~~~~kyG-~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (509)
                      .++.|+.... ..+.+.++..+.++++ .+++++.++.  ++++||+.+++++..+...|.+...+..... ...|.+ +
T Consensus        49 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~-~~~g~g-i  123 (502)
T PLN02426         49 AYLTASWAKD-FDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILG-DLLGRG-I  123 (502)
T ss_pred             CCccHHHHHh-cccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHH-HhcCCc-e
Confidence            5577887554 3445677777888887 5788876554  8999999999999976556665443321111 112444 4


Q ss_pred             ecCCChhHHHHHHHHHHhhcchhhhhhch--hhHHHHHHHHHHHHHHhhhc--CCcccHHHHHHHHHHHHHhHhhccCcc
Q 010479          119 FSPYGAYWREIRKICVIHLFNSIRAQNFR--PIREDEVSRMIESISKSAAA--SKQVNLSEIIMSLSCNTICRLGFGKRS  194 (509)
Q Consensus       119 ~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~--~~~~~~~~~l~~~l~~~~~~--~~~id~~~~~~~~~~~~i~~~~fG~~~  194 (509)
                      ++.+|+.|+++||. +++.|+..+++.+.  +.+++..+++++.+.+..+.  +.++|+.+++.++++|+|+.++||.++
T Consensus       124 ~~~~g~~wk~~Rk~-l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        124 FNVDGDSWRFQRKM-ASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             eecCcHHHHHHHHH-hHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence            55679999999999 68999998888763  67777888888888765432  367999999999999999999999988


Q ss_pred             CCCCccchhHHHHHHHHHHHHHhhcccccccccchhhhh-hhh-hcHHHHHHHHHHhHHHHHHHHHHHhcCCcCCcccCC
Q 010479          195 DDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGWI-DKL-TGMMRRLENNFQESDRFYQELIDEHLDPKRTKADMQ  272 (509)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  272 (509)
                      +..+... ...++....+........ .....+|++..+ .++ .+..++..+..+.+.+++.+.|+++++....    .
T Consensus       203 ~~l~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~----~  276 (502)
T PLN02426        203 GCLELSL-PISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGFS----A  276 (502)
T ss_pred             cccCCCC-CccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcccC----C
Confidence            7654211 122343433333221110 001112322111 111 1234566777888999999999888754211    1


Q ss_pred             cccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhhcCCCCCCCChh
Q 010479          273 QEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSLVGGNKSFVDED  352 (509)
Q Consensus       273 ~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~~~~~~~~~~~~  352 (509)
                      ..|+++.++++        ..+++++.++++++++||+|||+++++|++++|++||++|+|||+||+++.+.+...++++
T Consensus       277 ~~dll~~ll~~--------~~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~  348 (502)
T PLN02426        277 SKDLLSRFMAS--------INDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFE  348 (502)
T ss_pred             cchHHHHHHhc--------CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHH
Confidence            27999999974        2378899999999999999999999999999999999999999999999987654578999


Q ss_pred             hcccchhHHHHHHHhhcCCCCCccccccccccccee-eceeeCCCCEEEEehhhhccCCCCC-CCCCCCCCCccCCCCCC
Q 010479          353 DVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIV-DGYEIPAKTIVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSID  430 (509)
Q Consensus       353 ~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i-~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~~~~~~~  430 (509)
                      ++++||||+|||+||||++|++|.. .|.+.+|.++ +|+.|||||.|.++.+++||||++| |||++|+||||++++..
T Consensus       349 ~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~  427 (502)
T PLN02426        349 EMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVF  427 (502)
T ss_pred             HHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCc
Confidence            9999999999999999999999986 5999988777 9999999999999999999999999 99999999999974321


Q ss_pred             CCCCCceeecccCCcCCCCChhHHHHHHHHHHHHhHhhceeecCCCCCCCCCCccCcCCcceecccceEEEEeeccc
Q 010479          431 FKGQNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLNFDSLSGTTVHKKNFLVLLAKYHEY  507 (509)
Q Consensus       431 ~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  507 (509)
                      ....+..++|||+|+|.|+|+++|++|++++++.|+++|+++..++.. ..  .....+++.++++++.|++++|.-
T Consensus       428 ~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~--~~~~~~~~~~~~~gl~v~~~~r~~  501 (502)
T PLN02426        428 VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSN-RA--PRFAPGLTATVRGGLPVRVRERVR  501 (502)
T ss_pred             CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCC-CC--CcccceeEEecCCCEEEEEEEccC
Confidence            122346799999999999999999999999999999999999864321 11  122345778889999999999864


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=1.7e-60  Score=455.45  Aligned_cols=408  Identities=18%  Similarity=0.297  Sum_probs=295.6

Q ss_pred             CCCCCCCCCCCCCccccccCCC----CCCCcHHHHHHHHhhCC-eEEEeecCccE-------EEecCHHHHHHHHHH---
Q 010479           29 HASSLPPGPKGLPFIGNLHQFD----VSKPHVSFWELSKKYGP-LMSLRLGFVPT-------LVVSSAKMAKETLKA---   93 (509)
Q Consensus        29 ~~~~~ppgp~~~p~lG~~~~~~----~~~~~~~~~~~~~kyG~-v~~i~~~~~~~-------vvv~dp~~~~~i~~~---   93 (509)
                      .+.+.|||+.++|++|++..+.    ..++..++.+.++|||+ ||+++++|.|+       |+++||+.++.+|.+   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            3456789999999999987643    35567999999999999 99999998666       999999999999985   


Q ss_pred             -cCcCCCCCCCccccceeccCCcc---eeecCCChhHHHHHHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhhcCC
Q 010479           94 -HDLQFSGRPALVATQRLTYNGLE---LVFSPYGAYWREIRKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAAASK  169 (509)
Q Consensus        94 -~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~w~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~  169 (509)
                       ++..+..... .... + . |.+   .++..+|+.|+++||. +.++|+ ..++.+.+.+++.++++++.|.....++.
T Consensus        94 ~~~~~~~~~~~-~~~~-l-~-G~~~~~s~~~~~g~~H~r~Rrl-l~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~  167 (480)
T PLN02648         94 DKRDVFTGTYM-PSTA-F-T-GGYRVLSYLDPSEPKHAKLKSF-LFELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKG  167 (480)
T ss_pred             cccccceeeec-cCcc-c-c-CCceeeeecCCCCchHHHHHHH-HHHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCC
Confidence             3322322111 1112 1 2 433   5666679999999999 678888 47788999999999999999965434455


Q ss_pred             cccHHHHHHHHHHHHHhHhhccCccCCCCccchhHHHHHHHHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHHHHh
Q 010479          170 QVNLSEIIMSLSCNTICRLGFGKRSDDNDEATSERSRLHALLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENNFQE  249 (509)
Q Consensus       170 ~id~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~  249 (509)
                      ++|+.+.+..++++++++++||.+.+..    ...+.+...........       .+|....                .
T Consensus       168 ~vdv~~~~~~lt~~vi~~~lfG~~~~~~----~l~~~~~~~~~~~~~~~-------~~p~~~~----------------~  220 (480)
T PLN02648        168 KAEFNDPLDQMAFNFLCKALTGKDPSET----ALGSDGPALIQKWLALQ-------LAPLAST----------------G  220 (480)
T ss_pred             CccccchHHHHHHHHHHHHHcCCCcchh----hhccchhHHHHHHHHHH-------hhHHHHc----------------C
Confidence            7999999999999999999999865431    01111212222111100       0111000                0


Q ss_pred             HHHHHHHHHHHhcCCc--CCcccC--C---cccHHHHHHHHHhhcCCCCCCCHHHHHHHHHH-HHHhhccchHHHHHHHH
Q 010479          250 SDRFYQELIDEHLDPK--RTKADM--Q---QEDLIDVLLQIRKHRGFKVDLTLDHIKAVLMD-IFVAGTDTSAATMVWTM  321 (509)
Q Consensus       250 ~~~~~~~~i~~~~~~~--~~~~~~--~---~~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~-~l~Ag~~tt~~~l~~~l  321 (509)
                      +...+++.+.++....  ......  .   -.+.++.++...++.    ++++++++++++. +.+++++||+++++|++
T Consensus       221 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~----~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l  296 (480)
T PLN02648        221 LPHVLEELLLHTFPLPFFLVKSDYDKLYDFFRASATEALDLAEKF----GISREEALHNLLFVLGFNAFGGFKIFFPALL  296 (480)
T ss_pred             chHHHHHHhhcccCCchhhhhccHHHHHHHHHHHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            0001111111100000  000000  0   011222444433332    4999999999875 45667777788999999


Q ss_pred             HHHhhChH-HHHHHHHHHHhhcCCCCCCCChhhcccchhHHHHHHHhhcCCCCCcccccccccccceee----ceeeCCC
Q 010479          322 TYLMKYPR-VMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVD----GYEIPAK  396 (509)
Q Consensus       322 ~~l~~~p~-~q~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~----g~~ip~g  396 (509)
                      ++|++||+ +|++||+||+++.+..++.++++++++||||++||+||||++|+++.. .|++.+|++++    ||.||||
T Consensus       297 ~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~-~r~a~~d~~l~~~~~g~~IpkG  375 (480)
T PLN02648        297 KWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ-YGRAREDFVIESHDAAFEIKKG  375 (480)
T ss_pred             HHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc-cceecCCEEEecCCceEEECCC
Confidence            99999995 999999999999864335789999999999999999999999999986 58899999996    7999999


Q ss_pred             CEEEEehhhhccCCCCCCCCCCCCCCccCCCCCCCCCCCceeecc---------cCCcCCCCChhHHHHHHHHHHHHhHh
Q 010479          397 TIVYVNAWAIGRDPEAWENPEEFNPERFIDRSIDFKGQNFEFIPF---------GAGRRICPGMHLGIATVDLALANLLY  467 (509)
Q Consensus       397 ~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~F---------g~G~~~C~G~~~A~~~~~~~l~~ll~  467 (509)
                      +.|+++.+.+||||++|+||++|||+||+++..+.   ...+++|         |+|+|.|+|++||++|+++++++|++
T Consensus       376 ~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~---~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~  452 (480)
T PLN02648        376 EMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEK---LLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFL  452 (480)
T ss_pred             CEEEEChHHHhCCcccCCCcceeCCCCCCCCCccc---cccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999998643211   1233444         67789999999999999999999999


Q ss_pred             hce-eecCCCC
Q 010479          468 KFD-WEMPPGM  477 (509)
Q Consensus       468 ~~~-~~~~~~~  477 (509)
                      +|+ |++.++.
T Consensus       453 ~f~~~~l~~~~  463 (480)
T PLN02648        453 RYDSFEIEVDT  463 (480)
T ss_pred             HhCEEeecCCc
Confidence            998 9987664


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.7e-55  Score=416.71  Aligned_cols=360  Identities=28%  Similarity=0.428  Sum_probs=291.8

Q ss_pred             CcHHHHHHHHhhCCeEEEeecCcc--EEEecCHHHHHHHHHHcCcCCCCCCCccccc--eeccCCcceeecCCChhHHHH
Q 010479           54 PHVSFWELSKKYGPLMSLRLGFVP--TLVVSSAKMAKETLKAHDLQFSGRPALVATQ--RLTYNGLELVFSPYGAYWREI  129 (509)
Q Consensus        54 ~~~~~~~~~~kyG~v~~i~~~~~~--~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~w~~~  129 (509)
                      .......+.+.||.+..+...+..  .+++++|++++++++++. ..++........  .....|.+.++..+|+.|.++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            345556678889988888766554  899999999999999864 122221111111  112224444667789999999


Q ss_pred             HHHHHHhhcchhhhhhchhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHhHhhccCccCCCCccchhHHHHHH
Q 010479          130 RKICVIHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIIMSLSCNTICRLGFGKRSDDNDEATSERSRLHA  209 (509)
Q Consensus       130 Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~id~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  209 (509)
                      ||. +.+.|+++.++.+.+.+.+.+.++++.+ .  .. ..+++.+.+..+++++|+ .+||.+....       ..+..
T Consensus       103 Rkl-~~~~F~~~~~~~~~~~i~~~~~~~~~~~-~--~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~-------~~~~~  169 (411)
T COG2124         103 RKL-LAPAFTPRALRGYRPLIREIADRLLDDL-W--QG-GADLVLDFAAELTLRVIA-ELLGVPLEDR-------PQLLR  169 (411)
T ss_pred             HHH-hccccCHHHHHHHHHHHHHHHHHHHHhc-c--cC-CchhHHHHhhhhhHHHHH-HHhCCCHHHH-------HHHHH
Confidence            999 7999999999999999999999999998 3  22 788899999999999999 9999876641       12222


Q ss_pred             HHHHHHHhhcccccccccchhhhhhhhhcHHHHHHHHHHhHHHHHHHHHHHhcCCcCCcccCCcccHHHHHHHHHhhcCC
Q 010479          210 LLREIQALSIAFFVTDYFPFMGWIDKLTGMMRRLENNFQESDRFYQELIDEHLDPKRTKADMQQEDLIDVLLQIRKHRGF  289 (509)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~~  289 (509)
                      ..........        |....    .....+..++..++.+++.++|++++...       ..|+++.|+.+.++++ 
T Consensus       170 ~~~~~~~~~~--------~~~~~----~~~~~~~~~a~~~~~~~~~~li~~rR~~~-------~~dlls~l~~a~~~~~-  229 (411)
T COG2124         170 WSDALLLRLD--------PDLGP----EEPWRRARAARRELDAYLRALIAERRAAP-------RDDLLSLLLSAEDDGG-  229 (411)
T ss_pred             HHHHHHhccC--------cccCC----cccHHHHHHHHHHHHHHHHHHHHHhccCC-------cccHHHHHHHHhhCCC-
Confidence            2222211100        11110    12355677888999999999999988332       2799999999887764 


Q ss_pred             CCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhhcCCCCCCCChhhcccchhHHHHHHHhhc
Q 010479          290 KVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKEAMR  369 (509)
Q Consensus       290 ~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlR  369 (509)
                       ..+|++||+++++++++||+|||+++++|+++.|++||++++++++|.+.                 ||++++|+|+||
T Consensus       230 -~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~-----------------~~~~~~v~E~LR  291 (411)
T COG2124         230 -GRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR-----------------PLLEAVVEETLR  291 (411)
T ss_pred             -CcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch-----------------HHHHHHHHHHHH
Confidence             25999999999999999999999999999999999999999999998653                 899999999999


Q ss_pred             CCCCCcccccccccccceeeceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccCCCCCCCCCCCceeecccCCcCCCC
Q 010479          370 LQPPVPLLVPRETTEKCIVDGYEIPAKTIVYVNAWAIGRDPEAWENPEEFNPERFIDRSIDFKGQNFEFIPFGAGRRICP  449 (509)
Q Consensus       370 l~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~~~C~  449 (509)
                      ++||++. .+|.+.+|++++|+.||||+.|+++.+++||||++|+||++|||+||.          ..|+|||+|+|.|+
T Consensus       292 ~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~Cl  360 (411)
T COG2124         292 LYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCL  360 (411)
T ss_pred             hCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCcccc
Confidence            9999999 789999999999999999999999999999999999999999999996          45899999999999


Q ss_pred             ChhHHHHHHHHHHHHhHhhceeecCCC
Q 010479          450 GMHLGIATVDLALANLLYKFDWEMPPG  476 (509)
Q Consensus       450 G~~~A~~~~~~~l~~ll~~~~~~~~~~  476 (509)
                      |+.||++|++++++.++++|++....+
T Consensus       361 G~~lA~~E~~~~l~~ll~r~~~~~~~~  387 (411)
T COG2124         361 GAALARLELKVALAELLRRFPLLLLAE  387 (411)
T ss_pred             CHHHHHHHHHHHHHHHHHhCchhhcCC
Confidence            999999999999999999999876544


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=62.66  E-value=29  Score=21.37  Aligned_cols=43  Identities=14%  Similarity=0.193  Sum_probs=34.7

Q ss_pred             HHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHH
Q 010479          296 DHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEI  338 (509)
Q Consensus       296 ~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei  338 (509)
                      -++...+..++-.|.|..+-.++--+....-||+....+..|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            3566677777788888888888888888888999888888776


No 34 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=61.77  E-value=30  Score=33.26  Aligned_cols=36  Identities=14%  Similarity=0.173  Sum_probs=21.0

Q ss_pred             hhCCeEEEeecCccEEEecCHHHHHHHHHHcCcCCC
Q 010479           64 KYGPLMSLRLGFVPTLVVSSAKMAKETLKAHDLQFS   99 (509)
Q Consensus        64 kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~   99 (509)
                      +||.|++=.+-++.+-|=.=|..-++-+.+....|+
T Consensus       222 rfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~  257 (534)
T KOG3653|consen  222 RFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYS  257 (534)
T ss_pred             ccceeehhhccCceeEEEecCHHHHHHHHhHHHHHh
Confidence            788888877766655444444444444554444444


No 35 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=59.38  E-value=42  Score=24.58  Aligned_cols=62  Identities=24%  Similarity=0.361  Sum_probs=43.9

Q ss_pred             CCCCCCCCCCCCCccccccCCCCCCCcHHHHHHHHhhCCeEEEeecC------ccEEEecCHHHHHHHHHH
Q 010479           29 HASSLPPGPKGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGF------VPTLVVSSAKMAKETLKA   93 (509)
Q Consensus        29 ~~~~~ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~------~~~vvv~dp~~~~~i~~~   93 (509)
                      ...++||-...+-++.|++.   +-..+-+.++.-+||+|..|.+|.      ..+||-.|-..++..+.+
T Consensus         9 ~~~rlppevnriLyirNLp~---~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen    9 QNIRLPPEVNRILYIRNLPF---KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCCCCChhhheeEEEecCCc---cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            34455655555666676633   223466778889999999999884      457888888888888875


No 36 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=55.28  E-value=27  Score=26.00  Aligned_cols=11  Identities=36%  Similarity=0.389  Sum_probs=8.0

Q ss_pred             CCCccccccCC
Q 010479           39 GLPFIGNLHQF   49 (509)
Q Consensus        39 ~~p~lG~~~~~   49 (509)
                      .-|+.||+.-.
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            58888997543


No 37 
>PRK06789 flagellar motor switch protein; Validated
Probab=53.61  E-value=15  Score=25.06  Aligned_cols=41  Identities=12%  Similarity=0.212  Sum_probs=32.9

Q ss_pred             HHHHhhcCCCCCcccccccccccc--eeeceeeCCCCEEEEeh
Q 010479          363 VVKEAMRLQPPVPLLVPRETTEKC--IVDGYEIPAKTIVYVNA  403 (509)
Q Consensus       363 ~i~EtlRl~~~~~~~~~R~~~~d~--~i~g~~ip~g~~v~~~~  403 (509)
                      -++|-+.+.+..-.-+-|.+.+++  .++|..|.+|..|.++-
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~   63 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG   63 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence            478899999888777778877764  55999999999998753


No 38 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=51.43  E-value=12  Score=31.62  Aligned_cols=44  Identities=25%  Similarity=0.262  Sum_probs=31.8

Q ss_pred             cchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEE
Q 010479          356 ELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYV  401 (509)
Q Consensus       356 ~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~  401 (509)
                      .-....|||.|+.-.....-  +.=+..+|+.++|..|||||.++-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~--vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSR--VRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCE--EEEEEcCceEECCEEeCCCCEEEE
Confidence            34667789999987765442  223347889999999999997653


No 39 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=49.74  E-value=17  Score=23.27  Aligned_cols=22  Identities=32%  Similarity=0.521  Sum_probs=17.4

Q ss_pred             HHHHHHhhChHHHHHHHHHHHh
Q 010479          319 WTMTYLMKYPRVMKKVQEEIRS  340 (509)
Q Consensus       319 ~~l~~l~~~p~~q~~lr~Ei~~  340 (509)
                      -++.+|.+||++.++|.+.=..
T Consensus         4 ~iV~YLv~nPevl~kl~~g~as   25 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEAS   25 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCee
Confidence            3578999999999999975333


No 40 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=48.70  E-value=96  Score=22.04  Aligned_cols=51  Identities=12%  Similarity=0.150  Sum_probs=43.0

Q ss_pred             CCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhhc
Q 010479          292 DLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSLV  342 (509)
Q Consensus       292 ~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~~  342 (509)
                      .-+.+.........++--+.+++....-.+.+-++||+..+++.+.+.+-+
T Consensus        28 ~~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   28 QDSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             cccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            345566666777888999999999999999999999999999999887654


No 41 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=44.65  E-value=39  Score=23.84  Aligned_cols=17  Identities=18%  Similarity=0.511  Sum_probs=15.3

Q ss_pred             hHHHHHHHHHHHhhcCC
Q 010479          328 PRVMKKVQEEIRSLVGG  344 (509)
Q Consensus       328 p~~q~~lr~Ei~~~~~~  344 (509)
                      |++.+.+|+||.+++..
T Consensus        36 pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          36 PDYLEQLRKEILEVISK   52 (88)
T ss_pred             cchHHHHHHHHHHHHHH
Confidence            89999999999999864


No 42 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=42.12  E-value=12  Score=29.24  Aligned_cols=16  Identities=25%  Similarity=0.276  Sum_probs=6.9

Q ss_pred             HHHHHHhccccCCCCC
Q 010479           17 LFFVLRRHITSRHASS   32 (509)
Q Consensus        17 ~~~~~~~~~~~~~~~~   32 (509)
                      +++++..+..+++.++
T Consensus        14 l~~~~~~~~~rRR~r~   29 (130)
T PF12273_consen   14 LFLFLFYCHNRRRRRR   29 (130)
T ss_pred             HHHHHHHHHHHHHhhc
Confidence            3333333445555444


No 43 
>PF05261 Tra_M:  TraM protein, DNA-binding;  InterPro: IPR007925 The TraM protein is an essential part of the DNA transfer machinery of the conjugative resistance plasmid R1 (IncFII). On the basis of mutational analyses, it was shown that the essential transfer protein TraM has at least two functions. First, a functional TraM protein was found to be required for normal levels of transfer gene expression. Second, experimental evidence was obtained that TraM stimulates efficient site-specific single-stranded DNA cleavage at the oriT, in vivo. Furthermore, a specific interaction of the cytoplasmic TraM protein with the membrane protein TraD was demonstrated, suggesting that the TraM protein creates a physical link between the relaxosomal nucleoprotein complex and the membrane-bound DNA transfer apparatus [].; GO: 0003677 DNA binding, 0000746 conjugation; PDB: 3ON0_A 3OMY_B 1DP3_A 2G9E_A 3D8A_B 2G7O_A.
Probab=41.71  E-value=1.6e+02  Score=22.55  Aligned_cols=97  Identities=13%  Similarity=0.184  Sum_probs=55.3

Q ss_pred             hHHHHHHHHHHHhcCCcCCcccCCcccHHHHHHHHH----hhc--CCCCCCCHHHHHHHHHHHHHhhccchHHHHHHH--
Q 010479          249 ESDRFYQELIDEHLDPKRTKADMQQEDLIDVLLQIR----KHR--GFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWT--  320 (509)
Q Consensus       249 ~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~----~~~--~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~--  320 (509)
                      +..+-+..+++++++....+.+..-.+..+.|++.-    +..  .++.+++.++....++.-..-...+++..|...  
T Consensus        11 ~v~~~I~~iVe~r~qeGA~~~dvs~SSv~smLlELGLrVY~~Q~E~k~s~Fnq~eFnk~lLe~v~kt~~~~~~ILg~~~l   90 (127)
T PF05261_consen   11 KVLEEINDIVEERRQEGATEKDVSFSSVSSMLLELGLRVYEAQMERKESGFNQEEFNKVLLENVSKTRFTVSKILGMSSL   90 (127)
T ss_dssp             CHHHHHHHHHHHHHCCT-TTTT--HHHHHHHHHHCCCCHHHHCCHHCSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHhHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            445567778888887665544332246667776431    111  124579999988888888777777777665543  


Q ss_pred             HHHHhhC---------hHHHHHHHHHHHhhcCCC
Q 010479          321 MTYLMKY---------PRVMKKVQEEIRSLVGGN  345 (509)
Q Consensus       321 l~~l~~~---------p~~q~~lr~Ei~~~~~~~  345 (509)
                      .-++..+         +++.+++++++...++.+
T Consensus        91 s~~v~~~~~~ey~~m~~~I~~~v~e~m~~FFpe~  124 (127)
T PF05261_consen   91 SPEVKGNPKFEYENMVEKIREKVSEEMERFFPEN  124 (127)
T ss_dssp             SHHHCCHCGG-HHHHHHHHHHHHHHHHHHHS-CC
T ss_pred             cHhhccCCcccHHHHHHHHHHHHHHHHHhcCCCc
Confidence            3444443         345566666666666543


No 44 
>PRK13713 conjugal transfer protein TraM; Provisional
Probab=39.24  E-value=1.7e+02  Score=22.13  Aligned_cols=80  Identities=11%  Similarity=0.157  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHHhcCCcCCcccCCcccHHHHHHHHH----hh--cCCCCCCCHHHHHHHHHHHHHhhccchHHHHH--HHH
Q 010479          250 SDRFYQELIDEHLDPKRTKADMQQEDLIDVLLQIR----KH--RGFKVDLTLDHIKAVLMDIFVAGTDTSAATMV--WTM  321 (509)
Q Consensus       250 ~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~----~~--~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~--~~l  321 (509)
                      ..+-+..++++|++....+.+..-.+..+.|++.-    +.  ..++.++...+....++....-...+++..+.  ...
T Consensus         5 v~e~I~~iVe~RrqEGA~~~Dvs~SSv~sMLLELGLRVYeaQ~erkes~Fnq~eFnK~lLE~v~kt~~~~~~IL~~~~ls   84 (118)
T PRK13713          5 VYEKINAIVEERRQEGAREKDVSFSSVASMLLELGLRVYEAQMERKESGFNQTEFNKLLLECVVKTQSTVAKILGIESLS   84 (118)
T ss_pred             HHHHHHHHHHHHHHcCCCccCccHHHHHHHHHHHhHHHHHHHHHhhcCcccHHHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence            34456677777777655444333245666666431    11  11245788888888888877776666666543  333


Q ss_pred             HHHhhChH
Q 010479          322 TYLMKYPR  329 (509)
Q Consensus       322 ~~l~~~p~  329 (509)
                      -++..+|.
T Consensus        85 p~v~~~~~   92 (118)
T PRK13713         85 PHVSGNPK   92 (118)
T ss_pred             HhhcCCCc
Confidence            45555544


No 45 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=39.13  E-value=65  Score=22.61  Aligned_cols=8  Identities=50%  Similarity=0.733  Sum_probs=5.0

Q ss_pred             CCCCCccc
Q 010479           37 PKGLPFIG   44 (509)
Q Consensus        37 p~~~p~lG   44 (509)
                      |-..|++|
T Consensus        64 PIYrPvI~   71 (94)
T PF05393_consen   64 PIYRPVIG   71 (94)
T ss_pred             Cccccccc
Confidence            44567777


No 46 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=38.29  E-value=32  Score=26.61  Aligned_cols=23  Identities=13%  Similarity=0.329  Sum_probs=16.9

Q ss_pred             CCCCChhHHHHHHHHHHHHhHhh
Q 010479          446 RICPGMHLGIATVDLALANLLYK  468 (509)
Q Consensus       446 ~~C~G~~~A~~~~~~~l~~ll~~  468 (509)
                      ..|.|+.||+.++-.++.+++..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            47999999999999999999864


No 47 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=37.91  E-value=14  Score=26.85  Aligned_cols=17  Identities=35%  Similarity=0.542  Sum_probs=14.0

Q ss_pred             CceeecccCCcCCCCCh
Q 010479          435 NFEFIPFGAGRRICPGM  451 (509)
Q Consensus       435 ~~~~~~Fg~G~~~C~G~  451 (509)
                      ....+|||.|.-.|+|.
T Consensus       104 gss~~p~GaGaAaC~aA  120 (131)
T PF14459_consen  104 GSSNNPFGAGAAACFAA  120 (131)
T ss_pred             CcccCCcCccHHHHHHH
Confidence            34578999999999874


No 48 
>PHA03049 IMV membrane protein; Provisional
Probab=30.83  E-value=1.5e+02  Score=19.66  Aligned_cols=36  Identities=17%  Similarity=0.255  Sum_probs=14.7

Q ss_pred             HHhhHHHHHHHHHhccccCCCCCCCCCCCCCCcccc
Q 010479           10 LLCPPIFLFFVLRRHITSRHASSLPPGPKGLPFIGN   45 (509)
Q Consensus        10 ~l~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~lG~   45 (509)
                      ++|+++..++++--+.+.......||-|.-.+.+-+
T Consensus         9 iICVaIi~lIvYgiYnkk~~~q~~~p~~e~ye~~e~   44 (68)
T PHA03049          9 IICVVIIGLIVYGIYNKKTTTSQNPPSQEKYEKMED   44 (68)
T ss_pred             HHHHHHHHHHHHHHHhcccccCCCCCChhhccCchh
Confidence            344443333333333333334444444444444444


No 49 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=30.53  E-value=22  Score=22.26  Aligned_cols=11  Identities=45%  Similarity=0.918  Sum_probs=9.2

Q ss_pred             ecccCCcCCCC
Q 010479          439 IPFGAGRRICP  449 (509)
Q Consensus       439 ~~Fg~G~~~C~  449 (509)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            47999999985


No 50 
>COG5394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.63  E-value=3e+02  Score=22.16  Aligned_cols=69  Identities=10%  Similarity=0.289  Sum_probs=38.5

Q ss_pred             ccHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHHhhcCCC
Q 010479          274 EDLIDVLLQIRKHRGFKVDLTLDHIKAVLMDIFVAGTDTSAATMVWTMTYLMKYPRVMKKVQEEIRSLVGGN  345 (509)
Q Consensus       274 ~d~~~~ll~~~~~~~~~~~ls~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~q~~lr~Ei~~~~~~~  345 (509)
                      .+++..++-+.+..+...-++-.-++..+. |  -|-.--..+=++.=..+-.-.+.|+++|+.+..++++.
T Consensus        57 ~sVLtQIIfEeE~k~G~~llpi~fLrQlI~-f--YGdqMQ~~vpsyLE~smqaF~~qQs~lreq~~~~~~~~  125 (193)
T COG5394          57 HSVLTQIIFEEENKGGQNLLPISFLRQLIS-F--YGDQMQMVVPSYLEHSMQAFSDQQSRLREQMKKAFGGN  125 (193)
T ss_pred             HHHHHHHHHHHhccCCCccccHHHHHHHHH-H--HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            445555554444432133355544444433 2  23333333334444555566789999999999999865


No 51 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=28.32  E-value=1.5e+02  Score=18.41  Aligned_cols=36  Identities=14%  Similarity=0.287  Sum_probs=25.3

Q ss_pred             HHHHHHhhCCeEEEeecCc----cEEEecCHHHHHHHHHH
Q 010479           58 FWELSKKYGPLMSLRLGFV----PTLVVSSAKMAKETLKA   93 (509)
Q Consensus        58 ~~~~~~kyG~v~~i~~~~~----~~vvv~dp~~~~~i~~~   93 (509)
                      +.++-.+||+|.++.+...    -.|-..+++.++.....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            3567789999998876542    35566688888888764


No 52 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=27.09  E-value=70  Score=25.43  Aligned_cols=42  Identities=14%  Similarity=0.382  Sum_probs=27.7

Q ss_pred             cccccceeeceeeCCCCEEEEehh-------hhccCCCCCCCCCCCCCCc
Q 010479          381 ETTEKCIVDGYEIPAKTIVYVNAW-------AIGRDPEAWENPEEFNPER  423 (509)
Q Consensus       381 ~~~~d~~i~g~~ip~g~~v~~~~~-------~~~~d~~~~~dp~~F~P~R  423 (509)
                      ...+|+.|+|-.||+|+.-+....       .+|.+-+.|.. ..+||+.
T Consensus        51 ~f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~~   99 (145)
T PF11138_consen   51 TFSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPSK   99 (145)
T ss_pred             EECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCchh
Confidence            346889999999999987665542       24566666654 4444443


No 53 
>cd04516 TBP_eukaryotes eukaryotic TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=26.08  E-value=47  Score=27.43  Aligned_cols=56  Identities=20%  Similarity=0.430  Sum_probs=34.7

Q ss_pred             CCCCCCccCCCCCCCCCCCceeecccCCcCCCCC-hhHHHHH-HHHHHHHhHhhceee
Q 010479          417 EEFNPERFIDRSIDFKGQNFEFIPFGAGRRICPG-MHLGIAT-VDLALANLLYKFDWE  472 (509)
Q Consensus       417 ~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G-~~~A~~~-~~~~l~~ll~~~~~~  472 (509)
                      -+|+|++|-.--.....+....+-|+.|+=.|-| +...... ..--++.+|+++.+.
T Consensus        29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTGaks~e~a~~a~~~i~~~L~~~g~~   86 (174)
T cd04516          29 AEYNPKRFAAVIMRIREPKTTALIFSSGKMVCTGAKSEDDSKLAARKYARIIQKLGFP   86 (174)
T ss_pred             CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEecCCHHHHHHHHHHHHHHHHHcCCC
Confidence            5899999854211122345678999999999998 4443222 223344667666654


No 54 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=25.67  E-value=1.1e+02  Score=17.76  Aligned_cols=13  Identities=8%  Similarity=0.376  Sum_probs=10.2

Q ss_pred             HhhChHHHHHHHH
Q 010479          324 LMKYPRVMKKVQE  336 (509)
Q Consensus       324 l~~~p~~q~~lr~  336 (509)
                      +-+||++++.++.
T Consensus        23 ~~~HPei~~~i~~   35 (38)
T PF14483_consen   23 CERHPEIQQEIRS   35 (38)
T ss_dssp             HHHSTHHHHHHHT
T ss_pred             HHhChhHHHHHHh
Confidence            3489999988875


No 55 
>PRK05933 type III secretion system protein; Validated
Probab=25.42  E-value=71  Score=29.02  Aligned_cols=44  Identities=20%  Similarity=0.231  Sum_probs=35.0

Q ss_pred             HHHHHHHhhcCCCCCcccccccc-cc--cceeeceeeCCCCEEEEeh
Q 010479          360 LKAVVKEAMRLQPPVPLLVPRET-TE--KCIVDGYEIPAKTIVYVNA  403 (509)
Q Consensus       360 l~a~i~EtlRl~~~~~~~~~R~~-~~--d~~i~g~~ip~g~~v~~~~  403 (509)
                      ...-|+|.|+|.+..-+-+-|.+ .+  |+.++|..|.+|..|.++-
T Consensus       317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVdd  363 (372)
T PRK05933        317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALGD  363 (372)
T ss_pred             ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEECC
Confidence            66789999999998877665554 34  5667999999999998863


No 56 
>PLN00062 TATA-box-binding protein; Provisional
Probab=25.09  E-value=50  Score=27.41  Aligned_cols=55  Identities=20%  Similarity=0.437  Sum_probs=35.1

Q ss_pred             CCCCCCccCCCCCCCCCCCceeecccCCcCCCCCh-hHHHHH-HHHHHHHhHhhcee
Q 010479          417 EEFNPERFIDRSIDFKGQNFEFIPFGAGRRICPGM-HLGIAT-VDLALANLLYKFDW  471 (509)
Q Consensus       417 ~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~~~C~G~-~~A~~~-~~~~l~~ll~~~~~  471 (509)
                      -+|+||||-.--.....+....+-|+.|.=.|-|. ...... ..--++.+|++..+
T Consensus        29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTGaks~e~a~~a~~~~~~~L~~lg~   85 (179)
T PLN00062         29 AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEHDSKLAARKYARIIQKLGF   85 (179)
T ss_pred             CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEecCCHHHHHHHHHHHHHHHHHcCC
Confidence            48999998542112223456789999999999995 443332 33444566766655


No 57 
>PF08776 VASP_tetra:  VASP tetramerisation domain;  InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=23.80  E-value=1.5e+02  Score=17.41  Aligned_cols=29  Identities=17%  Similarity=0.394  Sum_probs=18.3

Q ss_pred             ChHHHHHHHHHHHhhcCCCCCCCChhhcccchhHHHHHHHhhc
Q 010479          327 YPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKEAMR  369 (509)
Q Consensus       327 ~p~~q~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlR  369 (509)
                      ..++.+.+|.|+..+..              ..++|+..|-.|
T Consensus         9 KqEIL~EvrkEl~K~K~--------------EIIeA~~~eL~r   37 (40)
T PF08776_consen    9 KQEILEEVRKELQKVKE--------------EIIEAIRQELSR   37 (40)
T ss_dssp             HHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH--------------HHHHHHHHHHhc
Confidence            35677777777776543              346666666544


No 58 
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=23.72  E-value=2.2e+02  Score=20.38  Aligned_cols=18  Identities=11%  Similarity=0.477  Sum_probs=15.7

Q ss_pred             ChHHHHHHHHHHHhhcCC
Q 010479          327 YPRVMKKVQEEIRSLVGG  344 (509)
Q Consensus       327 ~p~~q~~lr~Ei~~~~~~  344 (509)
                      .|++++.+++||.+++..
T Consensus        35 ~p~~l~~lk~eil~VIsK   52 (87)
T PRK13991         35 TPEMMEQMKADLAEVIKR   52 (87)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            589999999999998864


No 59 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=23.49  E-value=80  Score=17.38  Aligned_cols=16  Identities=25%  Similarity=0.758  Sum_probs=13.0

Q ss_pred             CCceeecccCCcCCCC
Q 010479          434 QNFEFIPFGAGRRICP  449 (509)
Q Consensus       434 ~~~~~~~Fg~G~~~C~  449 (509)
                      ....|+|+++..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            3467999999999994


No 60 
>PHA03162 hypothetical protein; Provisional
Probab=23.40  E-value=67  Score=24.61  Aligned_cols=24  Identities=21%  Similarity=0.499  Sum_probs=19.7

Q ss_pred             cCCcCCCCChhHHHHHHHHHHHHh
Q 010479          442 GAGRRICPGMHLGIATVDLALANL  465 (509)
Q Consensus       442 g~G~~~C~G~~~A~~~~~~~l~~l  465 (509)
                      ++|.+.|||+...+-|+-.=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            469999999999888887766665


No 61 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=23.36  E-value=2.2e+02  Score=19.02  Aligned_cols=7  Identities=29%  Similarity=0.980  Sum_probs=2.6

Q ss_pred             HHhhHHH
Q 010479           10 LLCPPIF   16 (509)
Q Consensus        10 ~l~~~~~   16 (509)
                      ++|+++.
T Consensus         9 ~ICVaii   15 (68)
T PF05961_consen    9 IICVAII   15 (68)
T ss_pred             HHHHHHH
Confidence            3333333


No 62 
>PF06667 PspB:  Phage shock protein B;  InterPro: IPR009554 This family consists of several bacterial phage shock protein B (PspB) sequences. The phage shock protein (psp) operon is induced in response to heat, ethanol, osmotic shock and infection by filamentous bacteriophages []. Expression of the operon requires the alternative sigma factor sigma54 and the transcriptional activator PspF. In addition, PspA plays a negative regulatory role, and the integral-membrane proteins PspB and PspC play a positive one [].; GO: 0006355 regulation of transcription, DNA-dependent, 0009271 phage shock
Probab=22.62  E-value=1.7e+02  Score=20.24  Aligned_cols=8  Identities=13%  Similarity=0.621  Sum_probs=3.3

Q ss_pred             HHHHHHhc
Q 010479           17 LFFVLRRH   24 (509)
Q Consensus        17 ~~~~~~~~   24 (509)
                      +.++++|+
T Consensus        20 ~WL~lHY~   27 (75)
T PF06667_consen   20 IWLILHYR   27 (75)
T ss_pred             HHHHHHHH
Confidence            33344444


No 63 
>COG1886 FliN Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=22.43  E-value=86  Score=24.66  Aligned_cols=43  Identities=21%  Similarity=0.169  Sum_probs=34.7

Q ss_pred             HHHHHHHhhcCCCCCcccccccccccce--eeceeeCCCCEEEEe
Q 010479          360 LKAVVKEAMRLQPPVPLLVPRETTEKCI--VDGYEIPAKTIVYVN  402 (509)
Q Consensus       360 l~a~i~EtlRl~~~~~~~~~R~~~~d~~--i~g~~ip~g~~v~~~  402 (509)
                      ...-++|-++|.+..-+-+.+.+.+++.  ++|+.|-+|..|.+.
T Consensus        82 ~~~~l~ell~l~~Gsvi~Ld~~~~~~VdI~vNg~~Ig~GEvVvvd  126 (136)
T COG1886          82 TKMPLGELLALGKGSVIELDKLAGEPVDILVNGRLIGRGEVVVVD  126 (136)
T ss_pred             eeeeHHHHHhcCCCCEEEcCCcCCCceEEEECCEEEEEEeEEEEC
Confidence            4567899999998887777788777654  599999999999875


No 64 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=22.06  E-value=59  Score=21.12  Aligned_cols=7  Identities=43%  Similarity=1.132  Sum_probs=5.5

Q ss_pred             CCCccCC
Q 010479          420 NPERFID  426 (509)
Q Consensus       420 ~P~R~~~  426 (509)
                      ||||||.
T Consensus        44 DPERWLP   50 (59)
T PF08492_consen   44 DPERWLP   50 (59)
T ss_pred             CccccCc
Confidence            7888885


No 65 
>PF13993 YccJ:  YccJ-like protein
Probab=22.00  E-value=1.3e+02  Score=19.44  Aligned_cols=31  Identities=19%  Similarity=0.165  Sum_probs=24.4

Q ss_pred             HhhccchHHHHHHHHHHHhhChHH-HHHHHHH
Q 010479          307 VAGTDTSAATMVWTMTYLMKYPRV-MKKVQEE  337 (509)
Q Consensus       307 ~Ag~~tt~~~l~~~l~~l~~~p~~-q~~lr~E  337 (509)
                      +|..-.||.-++-++++|+.+.+. -+++-+|
T Consensus         8 WA~~ReTS~EIAeAIFElA~~dE~lAekIWee   39 (69)
T PF13993_consen    8 WANVRETSIEIAEAIFELANNDEVLAEKIWEE   39 (69)
T ss_pred             HHHHhcCCHHHHHHHHHHhcccHHHHHHHHHc
Confidence            566778888999999999999874 4566665


No 66 
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=21.88  E-value=2.7e+02  Score=19.59  Aligned_cols=39  Identities=18%  Similarity=0.114  Sum_probs=28.9

Q ss_pred             cHHHHHHHHhhCCe---EEEeecCccEEEecCH-----HHHHHHHHH
Q 010479           55 HVSFWELSKKYGPL---MSLRLGFVPTLVVSSA-----KMAKETLKA   93 (509)
Q Consensus        55 ~~~~~~~~~kyG~v---~~i~~~~~~~vvv~dp-----~~~~~i~~~   93 (509)
                      .+..++++++|.++   +++..++.+-+-|++.     +.+.++++.
T Consensus        23 ~EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLqE   69 (81)
T PRK10597         23 GELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQE   69 (81)
T ss_pred             HHHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHHH
Confidence            35567788899987   9999999888888543     556666653


No 67 
>PRK09458 pspB phage shock protein B; Provisional
Probab=21.74  E-value=1.9e+02  Score=19.88  Aligned_cols=9  Identities=11%  Similarity=0.202  Sum_probs=3.5

Q ss_pred             HHHHHHHhc
Q 010479           16 FLFFVLRRH   24 (509)
Q Consensus        16 ~~~~~~~~~   24 (509)
                      -+.++++|+
T Consensus        19 PiWL~LHY~   27 (75)
T PRK09458         19 PIWLWLHYR   27 (75)
T ss_pred             HHHHHHhhc
Confidence            333444443


No 68 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=21.49  E-value=64  Score=30.76  Aligned_cols=44  Identities=23%  Similarity=0.242  Sum_probs=31.9

Q ss_pred             cchhHHHHHHHhhcCCCCCcccccccccccceeeceeeCCCCEEEE
Q 010479          356 ELHYLKAVVKEAMRLQPPVPLLVPRETTEKCIVDGYEIPAKTIVYV  401 (509)
Q Consensus       356 ~lp~l~a~i~EtlRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~  401 (509)
                      .-..+.|||.|+.=.....-  +.=+..+|+.++|..|||||.|+-
T Consensus       254 ~~n~I~A~V~~~qtv~~G~~--vrlRLle~~~v~~~~ipkgt~l~g  297 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGSA--VKLRLLEPIQAGDLVIPKGTVLYG  297 (410)
T ss_pred             CCCceEEEEcCceEEecCCE--EEEEEcCceeeCCEEecCCCEEEE
Confidence            34667889999887775432  213347899999999999997653


No 69 
>PF08285 DPM3:  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3);  InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=20.74  E-value=1.4e+02  Score=21.46  Aligned_cols=29  Identities=21%  Similarity=0.328  Sum_probs=22.6

Q ss_pred             HHHHHHHHHHhhChHHHHHHHHHHHhhcC
Q 010479          315 ATMVWTMTYLMKYPRVMKKVQEEIRSLVG  343 (509)
Q Consensus       315 ~~l~~~l~~l~~~p~~q~~lr~Ei~~~~~  343 (509)
                      .++.|-+.-.-.+||..+.|.+||+++..
T Consensus        54 ~~lgy~v~tFnDcpeA~~eL~~eI~eAK~   82 (91)
T PF08285_consen   54 FTLGYGVATFNDCPEAAKELQKEIKEAKA   82 (91)
T ss_pred             HHHHHhhhccCCCHHHHHHHHHHHHHHHH
Confidence            35566666666789999999999998763


No 70 
>PRK13989 cell division topological specificity factor MinE; Provisional
Probab=20.41  E-value=1.8e+02  Score=20.57  Aligned_cols=19  Identities=16%  Similarity=0.333  Sum_probs=16.0

Q ss_pred             ChHHHHHHHHHHHhhcCCC
Q 010479          327 YPRVMKKVQEEIRSLVGGN  345 (509)
Q Consensus       327 ~p~~q~~lr~Ei~~~~~~~  345 (509)
                      .|+.++.+++||.+++...
T Consensus        36 ~p~~l~~lk~dil~VIsKY   54 (84)
T PRK13989         36 PPDYLPALQKELVAVISKY   54 (84)
T ss_pred             CHHHHHHHHHHHHHHHHHh
Confidence            4889999999999998643


No 71 
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=20.21  E-value=84  Score=29.05  Aligned_cols=54  Identities=15%  Similarity=0.238  Sum_probs=41.2

Q ss_pred             HHHHhhChH-HHHHHHHHHHhhcCCCCCCCChhhccc----chhHH----------HHHHHhhcCCCCC
Q 010479          321 MTYLMKYPR-VMKKVQEEIRSLVGGNKSFVDEDDVQE----LHYLK----------AVVKEAMRLQPPV  374 (509)
Q Consensus       321 l~~l~~~p~-~q~~lr~Ei~~~~~~~~~~~~~~~~~~----lp~l~----------a~i~EtlRl~~~~  374 (509)
                      +.+|+.||+ ..+++-+|+..+...++..+-|+.+.+    |+|-+          .+|.|-+=-||.-
T Consensus       143 fLFiA~~~erF~~~viAEmrG~~De~G~SPFWd~lg~hFF~mdF~eAD~Lsg~~~k~FIaeLMP~~PIY  211 (336)
T TIGR03244       143 FLFIAQFRERFSKKIIAEMRGVSDEQGRSPFWNALGRHFFSMDFSQADYLSGIGQKAFIAELMPKFPIY  211 (336)
T ss_pred             HHHHHhhHhhhhhhhhhhhcCccCCCCCCchHHHhhccccCCCHHHHHHHhccCcchhHHHHCCCCCcc
Confidence            567888998 688999999999988778888887753    55533          6888877666653


No 72 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=20.04  E-value=58  Score=21.65  Aligned_cols=15  Identities=27%  Similarity=0.654  Sum_probs=12.7

Q ss_pred             chhHHHHHHHhhcCC
Q 010479          357 LHYLKAVVKEAMRLQ  371 (509)
Q Consensus       357 lp~l~a~i~EtlRl~  371 (509)
                      .-+++.+|+|++|+.
T Consensus        40 ~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   40 KQFVEMIIKEAARFK   54 (65)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            467999999999974


Done!