Query 010482
Match_columns 509
No_of_seqs 226 out of 1836
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 07:45:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010482.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010482hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 3E-114 1E-118 914.0 57.3 472 34-506 7-484 (490)
2 3ifg_A Succinate-semialdehyde 100.0 7E-111 2E-115 889.1 56.2 472 33-504 12-483 (484)
3 3ek1_A Aldehyde dehydrogenase; 100.0 5E-110 2E-114 885.5 56.7 472 32-505 31-502 (504)
4 3ed6_A Betaine aldehyde dehydr 100.0 1E-109 5E-114 884.9 58.4 473 33-505 32-510 (520)
5 3rh9_A Succinate-semialdehyde 100.0 1E-109 5E-114 882.3 56.5 472 33-505 11-484 (506)
6 4f3x_A Putative aldehyde dehyd 100.0 2E-109 8E-114 879.6 54.7 471 33-505 25-497 (498)
7 3k2w_A Betaine-aldehyde dehydr 100.0 5E-109 2E-113 878.5 56.2 474 33-506 12-489 (497)
8 3u4j_A NAD-dependent aldehyde 100.0 2E-108 5E-113 878.5 58.3 473 33-505 22-498 (528)
9 2o2p_A Formyltetrahydrofolate 100.0 1E-108 3E-113 877.9 56.3 470 35-504 38-516 (517)
10 3iwj_A Putative aminoaldehyde 100.0 3E-108 1E-112 873.3 59.8 472 34-505 8-489 (503)
11 3jz4_A Succinate-semialdehyde 100.0 4E-108 1E-112 869.9 59.6 473 33-505 9-481 (481)
12 3prl_A NADP-dependent glyceral 100.0 4E-108 1E-112 871.4 56.7 473 27-505 5-483 (505)
13 1a4s_A ALDH, betaine aldehyde 100.0 6E-108 2E-112 870.8 57.2 471 33-505 19-496 (503)
14 1bxs_A Aldehyde dehydrogenase; 100.0 3E-107 1E-111 864.1 60.0 471 34-505 21-496 (501)
15 3i44_A Aldehyde dehydrogenase; 100.0 2E-107 7E-112 864.5 57.3 465 34-502 26-495 (497)
16 2imp_A Lactaldehyde dehydrogen 100.0 3E-107 9E-112 862.6 58.1 471 34-504 7-478 (479)
17 2d4e_A 5-carboxymethyl-2-hydro 100.0 5E-107 2E-111 865.7 59.3 471 34-505 27-505 (515)
18 1o04_A Aldehyde dehydrogenase, 100.0 3E-107 1E-111 863.5 57.4 471 34-505 20-495 (500)
19 3r31_A BADH, betaine aldehyde 100.0 1E-107 5E-112 869.2 53.4 468 33-505 14-488 (517)
20 1wnd_A Putative betaine aldehy 100.0 5E-107 2E-111 861.2 57.1 470 32-504 22-494 (495)
21 3b4w_A Aldehyde dehydrogenase; 100.0 2E-107 5E-112 865.9 53.0 469 34-505 9-482 (495)
22 4e4g_A Methylmalonate-semialde 100.0 3E-107 1E-111 867.2 53.4 472 34-506 27-506 (521)
23 3qan_A 1-pyrroline-5-carboxyla 100.0 2E-106 8E-111 863.3 58.8 468 34-505 38-516 (538)
24 2ve5_A BADH, betaine aldehyde 100.0 5E-106 2E-110 856.0 57.6 471 34-505 7-483 (490)
25 4dng_A Uncharacterized aldehyd 100.0 1E-105 4E-110 852.2 56.5 471 34-507 7-480 (485)
26 2w8n_A Succinate-semialdehyde 100.0 4E-106 1E-110 853.9 52.7 468 34-504 13-485 (487)
27 3r64_A NAD dependent benzaldeh 100.0 2E-105 6E-110 853.6 57.3 470 34-507 13-487 (508)
28 3pqa_A Lactaldehyde dehydrogen 100.0 1E-105 4E-110 848.6 55.5 457 36-504 2-463 (486)
29 3ros_A NAD-dependent aldehyde 100.0 1E-105 5E-110 848.2 52.9 454 50-505 5-458 (484)
30 1euh_A NADP dependent non phos 100.0 6E-105 2E-109 844.1 55.3 463 34-504 5-473 (475)
31 2j6l_A Aldehyde dehydrogenase 100.0 5E-105 2E-109 848.3 54.1 468 34-504 24-498 (500)
32 1t90_A MMSDH, probable methylm 100.0 9E-105 3E-109 844.4 54.7 471 34-506 6-481 (486)
33 1uzb_A 1-pyrroline-5-carboxyla 100.0 2E-104 6E-109 847.0 57.5 467 34-504 38-515 (516)
34 1uxt_A Glyceraldehyde-3-phosph 100.0 5E-105 2E-109 848.0 51.9 463 35-505 20-492 (501)
35 3ty7_A Putative aldehyde dehyd 100.0 9E-105 3E-109 843.7 50.1 463 34-502 8-474 (478)
36 3etf_A Putative succinate-semi 100.0 7E-103 2E-107 826.5 55.2 456 48-505 6-461 (462)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 3E-102 9E-107 834.0 53.8 470 33-505 63-551 (563)
38 3ju8_A Succinylglutamic semial 100.0 6E-101 2E-105 815.8 53.4 461 34-504 6-470 (490)
39 4h7n_A Aldehyde dehydrogenase; 100.0 6E-101 2E-105 812.9 51.5 455 47-505 4-463 (474)
40 4f9i_A Proline dehydrogenase/d 100.0 9E-100 3E-104 856.1 56.5 470 34-506 532-1011(1026)
41 2y53_A Aldehyde dehydrogenase 100.0 2.1E-99 7E-104 811.9 51.2 464 34-503 8-517 (534)
42 3lns_A Benzaldehyde dehydrogen 100.0 2.9E-97 1E-101 781.5 50.0 443 49-503 6-455 (457)
43 3sza_A Aldehyde dehydrogenase, 100.0 1E-95 4E-100 770.4 50.3 428 68-505 15-448 (469)
44 3v4c_A Aldehyde dehydrogenase 100.0 8E-95 2.7E-99 775.4 43.6 451 34-501 30-514 (528)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 1.2E-92 4.3E-97 755.4 46.0 444 45-502 3-480 (510)
46 3haz_A Proline dehydrogenase; 100.0 4.5E-91 1.5E-95 783.7 50.4 436 65-506 544-988 (1001)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 2.1E-85 7.3E-90 690.1 29.6 405 52-505 10-435 (463)
48 1vlu_A Gamma-glutamyl phosphat 100.0 6.9E-83 2.3E-87 672.0 25.5 395 72-505 15-440 (468)
49 3k9d_A LMO1179 protein, aldehy 100.0 6.6E-82 2.3E-86 665.8 31.7 417 64-504 5-448 (464)
50 1o20_A Gamma-glutamyl phosphat 100.0 1.4E-80 4.9E-85 648.6 30.3 388 70-506 13-423 (427)
51 4ghk_A Gamma-glutamyl phosphat 100.0 3.1E-80 1.1E-84 649.2 31.9 389 70-505 25-439 (444)
52 3my7_A Alcohol dehydrogenase/a 100.0 2.6E-77 9E-82 628.8 29.3 410 65-505 1-449 (452)
53 4gic_A HDH, histidinol dehydro 97.8 0.024 8.1E-07 57.1 28.4 327 86-500 26-398 (423)
54 1kae_A HDH, histidinol dehydro 97.3 0.14 4.9E-06 51.6 26.5 282 131-501 87-392 (434)
55 2fiu_A Conserved hypothetical 67.1 17 0.00058 28.6 7.0 61 355-435 15-76 (99)
56 1s7i_A Hypothetical protein PA 54.5 39 0.0013 27.7 7.3 73 358-436 30-108 (124)
57 2xw6_A MGS, methylglyoxal synt 53.3 5.4 0.00018 33.6 1.7 85 185-279 19-112 (134)
58 1b93_A Protein (methylglyoxal 53.1 21 0.00072 30.6 5.5 114 171-309 12-135 (152)
59 1vmd_A MGS, methylglyoxal synt 48.5 16 0.00055 32.2 4.1 120 165-309 21-151 (178)
60 3lo3_A Uncharacterized conserv 47.0 45 0.0015 25.8 6.2 61 355-435 14-75 (94)
61 2yvq_A Carbamoyl-phosphate syn 46.0 19 0.00066 30.4 4.2 63 216-279 60-132 (143)
62 3hhl_A RPA0582; alpha-beta-bar 44.0 48 0.0016 28.0 6.3 65 354-435 45-110 (143)
63 3lap_A Arginine repressor; arg 37.4 2E+02 0.0069 24.9 10.0 42 190-235 105-146 (170)
64 3v42_A Folliculin; tumor suppr 34.6 20 0.00068 32.9 2.6 70 187-264 21-90 (226)
65 2zfz_A Arginine repressor; DNA 31.3 70 0.0024 23.8 4.8 37 195-235 19-55 (79)
66 1b4b_A Arginine repressor; cor 31.1 66 0.0023 23.4 4.5 36 196-235 12-47 (71)
67 2ioj_A Hypothetical protein AF 30.9 36 0.0012 28.3 3.5 46 227-272 53-98 (139)
68 2bon_A Lipid kinase; DAG kinas 30.4 90 0.0031 30.1 6.8 103 199-305 33-146 (332)
69 3fgh_A Transcription factor A, 29.9 1.2E+02 0.004 21.4 5.7 36 79-114 29-64 (67)
70 1xxa_A ARGR, arginine represso 28.0 59 0.002 24.2 3.8 37 196-235 14-50 (78)
71 2p5m_A Arginine repressor; alp 26.5 68 0.0023 24.2 4.0 36 196-235 24-59 (83)
72 2ixa_A Alpha-N-acetylgalactosa 26.0 3.6E+02 0.012 26.8 10.6 137 191-345 36-173 (444)
73 3v4g_A Arginine repressor; vib 25.3 53 0.0018 28.9 3.5 43 190-235 110-152 (180)
74 2eqz_A High mobility group pro 23.3 1.6E+02 0.0054 21.9 5.7 35 80-114 49-83 (86)
75 2qv7_A Diacylglycerol kinase D 23.2 2.2E+02 0.0074 27.3 8.1 103 199-305 28-142 (337)
76 2i2c_A Probable inorganic poly 22.6 96 0.0033 29.0 5.1 87 200-304 5-94 (272)
77 3pzy_A MOG; ssgcid, seattle st 22.4 39 0.0013 29.1 2.2 50 211-261 28-79 (164)
78 3iwt_A 178AA long hypothetical 20.4 98 0.0034 26.7 4.4 51 210-260 40-93 (178)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.9e-114 Score=913.97 Aligned_cols=472 Identities=38% Similarity=0.627 Sum_probs=452.4
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|..+|.++|++++++|++++++|
T Consensus 7 ~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 86 (490)
T 2wme_A 7 QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDEL 86 (490)
T ss_dssp BCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 57899999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 114 GQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
++++++|+|||+.+++. |+..+++.++||+.+.+++.+...+. .++...+++++|+|||++|+|||||+.+.++++++
T Consensus 87 a~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ 165 (490)
T 2wme_A 87 AALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAP 165 (490)
T ss_dssp HHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE-ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccc-cCCcceeEEecceeEEEEeccccCcchhhhhhHHH
Confidence 99999999999999986 69999999999999998887766543 24567889999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHH-HhhcC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA-GAAGT 271 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~-~~~~~ 271 (509)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+.+|+.|++ .++.+
T Consensus 166 ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~ 245 (490)
T 2wme_A 166 ALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 245 (490)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHH
T ss_pred HHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999998876 55677
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
+||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+++++
T Consensus 246 lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~ 325 (490)
T 2wme_A 246 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNF 325 (490)
T ss_dssp CCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred CceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHH
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 427 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai 427 (509)
||++++.+++++.++|++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 326 Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 405 (490)
T 2wme_A 326 GPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAI 405 (490)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHH
Confidence 9999999999999999999999999999998653 247999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEecc
Q 010482 428 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506 (509)
Q Consensus 428 ~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~~ 506 (509)
+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.-
T Consensus 406 ~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~g 484 (490)
T 2wme_A 406 RRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELG 484 (490)
T ss_dssp HHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred HHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeEEEEECC
Confidence 9999999999999999999999999999999999999987777899999999999999999999999999999998743
No 2
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=7.2e-111 Score=889.14 Aligned_cols=472 Identities=57% Similarity=0.988 Sum_probs=454.7
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
..++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999877788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
|++++++|+|||..+++.|+..+++.++||+.+.++..+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 171 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGP 171 (484)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHH
Confidence 99999999999999999999999999999999988877765554445677899999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.+++++
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~ 251 (484)
T 3ifg_A 172 ALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTV 251 (484)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++|
T Consensus 252 k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 331 (484)
T 3ifg_A 252 KKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLG 331 (484)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred CceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhc
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 432 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~ 432 (509)
|++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 332 pli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~ 411 (484)
T 3ifg_A 332 PLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLAND 411 (484)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHC
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999999999875446899999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 433 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 433 ~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 412 ~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 412 TEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp SSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999877778999999999999999999999999999999874
No 3
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=4.7e-110 Score=885.51 Aligned_cols=472 Identities=59% Similarity=0.984 Sum_probs=454.9
Q ss_pred CccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 010482 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 32 ~~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
+..++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|+++++
T Consensus 31 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 110 (504)
T 3ek1_A 31 LKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANAD 110 (504)
T ss_dssp CCSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999987778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhh
Q 010482 112 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
+|++++++|+|||..+++.|+..+++.++||+.+..+..+...+...++...++.++|+|||++|+|||||+.+.+++++
T Consensus 111 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 190 (504)
T 3ek1_A 111 DIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAA 190 (504)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHH
Confidence 99999999999999999999999999999999999887776555444567789999999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.++++
T Consensus 191 ~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~ 270 (504)
T 3ek1_A 191 PALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPT 270 (504)
T ss_dssp HHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGG
T ss_pred HHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|+++++
T Consensus 271 lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 350 (504)
T 3ek1_A 271 IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVI 350 (504)
T ss_dssp TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred cCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHh
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 431 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n 431 (509)
||++++.+++++.++|++++++|+++++||... +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 351 Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN 428 (504)
T 3ek1_A 351 GPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL--GGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQAN 428 (504)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHh
Confidence 999999999999999999999999999999763 579999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 432 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 432 ~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 429 ~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 429 DTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp CSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred CCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 99999999999999999999999999999999998877789999999999999999999999999999998864
No 4
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.4e-109 Score=884.92 Aligned_cols=473 Identities=39% Similarity=0.669 Sum_probs=454.8
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhh--HhhhcCCHHHHHHHHHHHHHHHHHhH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF--NSWSKLTAAERSKGLRKWYDLLMAHK 110 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~iL~~~a~~l~~~~ 110 (509)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| +.|+.++..+|.++|++++++|++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHR 111 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhH
Confidence 3568999999987778899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhh
Q 010482 111 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 190 (509)
Q Consensus 111 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 190 (509)
++|++++++|+|||+.+++.|+..+++.++|++.++++..+...+...++...++.++|+|||++|+|||||+.+.++++
T Consensus 112 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 191 (520)
T 3ed6_A 112 EALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKI 191 (520)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999888776655443345678899999999999999999999999999
Q ss_pred hhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc
Q 010482 191 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270 (509)
Q Consensus 191 ~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 270 (509)
+|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.+++
T Consensus 192 apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~ 271 (520)
T 3ed6_A 192 APALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAAN 271 (520)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcc
Q 010482 271 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 350 (509)
Q Consensus 271 ~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~ 350 (509)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++++
T Consensus 272 ~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~ 351 (520)
T 3ed6_A 272 NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTE 351 (520)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCS
T ss_pred cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHH
Q 010482 351 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 426 (509)
Q Consensus 351 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~ea 426 (509)
+||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 352 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 431 (520)
T 3ed6_A 352 MGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEA 431 (520)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHH
Confidence 99999999999999999999999999999998642 35899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 427 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 427 i~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 432 i~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~ 510 (520)
T 3ed6_A 432 IQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNT 510 (520)
T ss_dssp HHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred HHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence 9999999999999999999999999999999999999998877789999999999999999999999999999998864
No 5
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=1.4e-109 Score=882.35 Aligned_cols=472 Identities=44% Similarity=0.749 Sum_probs=453.8
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 90 (506)
T 3rh9_A 11 NLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREE 90 (506)
T ss_dssp CCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 35789999999887789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEe-ecceEEEEEcCCChhHHHHHHhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLK-QPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
|++++++|+|||..+++.|+..+++.++|++..+++..+...+.. ++...++.+ +|+|||++|+|||||+.+.+++++
T Consensus 91 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 169 (506)
T 3rh9_A 91 IGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEK-PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLS 169 (506)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCC-GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeeEeecccceEEEEECCCchHHHHHHHHHH
Confidence 999999999999999999999999999999999988877654433 456678889 999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.++++
T Consensus 170 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~ 249 (506)
T 3rh9_A 170 AALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQ 249 (506)
T ss_dssp HHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTT
T ss_pred HHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++++
T Consensus 250 l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 329 (506)
T 3rh9_A 250 VKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDI 329 (506)
T ss_dssp TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSB
T ss_pred CCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCC-CCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 430 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~ 430 (509)
||++++.+++++.++|++++++|+++++||...+. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 330 Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~a 409 (506)
T 3rh9_A 330 GPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAG 409 (506)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999986433 68999999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 431 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 431 n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 410 N~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 410 NDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp TCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 999999999999999999999999999999999998887889999999999999999999999999999998753
No 6
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=2.4e-109 Score=879.57 Aligned_cols=471 Identities=35% Similarity=0.602 Sum_probs=452.1
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
..++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus 25 ~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 103 (498)
T 4f3x_A 25 DTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADE 103 (498)
T ss_dssp CCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 3568999999987656 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHH-hhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhh
Q 010482 113 LGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
|++++++|+|||..++ +.|+..+++.++|++.++++..+...+...++...++.++|+|||++|+|||||+.+.+++++
T Consensus 104 la~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 183 (498)
T 4f3x_A 104 FAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLA 183 (498)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHHHH
Confidence 9999999999999999 889999999999999998887666544333466789999999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.++++
T Consensus 184 ~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~ 262 (498)
T 4f3x_A 184 PAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKT 262 (498)
T ss_dssp HHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999 999999999998888999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++
T Consensus 263 ~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~ 342 (498)
T 4f3x_A 263 VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEI 342 (498)
T ss_dssp TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSS
T ss_pred CCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCC-EEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 010482 352 GPLINKAALEKVETFVEDAVSKGA-KVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 430 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga-~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~ 430 (509)
||++++.+++++.++|++++++|+ ++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 343 Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~a 422 (498)
T 4f3x_A 343 GPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWA 422 (498)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHH
T ss_pred ccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHH
Confidence 999999999999999999999999 9999998654468999999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 431 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 431 n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 423 N~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 423 NDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp HSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred hcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence 999999999999999999999999999999999998877799999999999999999999999999999998753
No 7
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=4.9e-109 Score=878.53 Aligned_cols=474 Identities=37% Similarity=0.646 Sum_probs=453.3
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
+.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 91 (497)
T 3k2w_A 12 NKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHI 91 (497)
T ss_dssp TTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred ccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999987788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
|++++++|+|||..+++.|+..+++.++|++...++..+...+...++...++.++|+|||++|+|||||+...++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 171 (497)
T 3k2w_A 92 LAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGP 171 (497)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999988877665443344667889999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l 251 (497)
T 3k2w_A 172 ALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYM 251 (497)
T ss_dssp HHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+++++++|
T Consensus 252 ~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~g 331 (497)
T 3k2w_A 252 TPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMG 331 (497)
T ss_dssp CCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBC
T ss_pred CCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--cCC--CCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRR--HSL--GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
|++++.+++++.++|++++++|+++++||.. .+. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 332 pli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 411 (497)
T 3k2w_A 332 PKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIE 411 (497)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHH
T ss_pred cCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999973 222 589999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEecc
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 506 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~~ 506 (509)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.+
T Consensus 412 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~ 489 (497)
T 3k2w_A 412 FCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINEA 489 (497)
T ss_dssp HHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEECC
T ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEcc
Confidence 999999999999999999999999999999999999988777899999999999999999999999999999988754
No 8
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.5e-108 Score=878.54 Aligned_cols=473 Identities=40% Similarity=0.657 Sum_probs=454.8
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhh--HhhhcCCHHHHHHHHHHHHHHHHHh
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAF--NSWSKLTAAERSKGLRKWYDLLMAH 109 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~iL~~~a~~l~~~ 109 (509)
..++||||+|+.+.++++++++||+| |+++++++.++.+|+++|+++|++|| +.|+.++.++|.++|+++++.|+++
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 35799999999987788999999999 99999999999999999999999999 8899999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHh
Q 010482 110 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 189 (509)
Q Consensus 110 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 189 (509)
+++|++++++|+|||..+++.|+..+++.+++++..+++..+...+...++...++.++|+|||++|+|||||+...+++
T Consensus 102 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 181 (528)
T 3u4j_A 102 QEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASER 181 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999999998877665544334567899999999999999999999999999
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.++
T Consensus 182 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 261 (528)
T 3u4j_A 182 VPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAA 261 (528)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCc
Q 010482 270 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349 (509)
Q Consensus 270 ~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~ 349 (509)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+++++
T Consensus 262 ~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 341 (528)
T 3u4j_A 262 RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERT 341 (528)
T ss_dssp TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTC
T ss_pred hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCC-CCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
++||++++.+++++.++|++++++|+++++||..... +|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 342 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 421 (528)
T 3u4j_A 342 KIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVA 421 (528)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred ccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999987532 689999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 422 ~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 498 (528)
T 3u4j_A 422 LANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTL 498 (528)
T ss_dssp HHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEES
T ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeC
Confidence 99999999999999999999999999999999999998877889999999999999999999999999999998864
No 9
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=1e-108 Score=877.86 Aligned_cols=470 Identities=38% Similarity=0.638 Sum_probs=449.0
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH--hhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|++++++
T Consensus 38 ~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 117 (517)
T 2o2p_A 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEE 117 (517)
T ss_dssp SEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999865678999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCC---CCCceeEEEeecceEEEEEcCCChhHHHHHH
Q 010482 113 LGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPAT---LPDRRLFVLKQPVGVAGAITPWNFPLAMITR 188 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 188 (509)
|++++++|+|||+.+++ .|+..+++.++|++.++++..+...+.. .++...++.++|+|||++|+|||||+...++
T Consensus 118 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 197 (517)
T 2o2p_A 118 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSW 197 (517)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHH
Confidence 99999999999999998 8999999999999999888766544432 2233578999999999999999999999999
Q ss_pred hhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh
Q 010482 189 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268 (509)
Q Consensus 189 ~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 268 (509)
++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.+++++|++||+|++|+||||+++|+.|++.+
T Consensus 198 ~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~a 277 (517)
T 2o2p_A 198 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred h-cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCC
Q 010482 269 A-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 347 (509)
Q Consensus 269 ~-~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~ 347 (509)
+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+
T Consensus 278 a~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~ 357 (517)
T 2o2p_A 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLER 357 (517)
T ss_dssp HHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTST
T ss_pred HHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 9 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCC--HHH
Q 010482 348 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT--EEE 425 (509)
Q Consensus 348 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~--~~e 425 (509)
++++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+| +||
T Consensus 358 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~de 437 (517)
T 2o2p_A 358 DTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDA 437 (517)
T ss_dssp TCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHH
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHH
Confidence 999999999999999999999999999999999976533589999999999999999999999999999999999 999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 438 Ai~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 438 VLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp HHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 9999999999999999999999999999999999999999877778999999999999999999999999999999875
No 10
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=3.3e-108 Score=873.33 Aligned_cols=472 Identities=40% Similarity=0.669 Sum_probs=452.5
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH-----hhhcCCHHHHHHHHHHHHHHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-----SWSKLTAAERSKGLRKWYDLLMA 108 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~iL~~~a~~l~~ 108 (509)
.++||||+|+++.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|++
T Consensus 8 ~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~ 87 (503)
T 3iwj_A 8 RQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTE 87 (503)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHH
T ss_pred CceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHH
Confidence 5689999999887788999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhcccc-C--CCCCCceeEEEeecceEEEEEcCCChhHHH
Q 010482 109 HKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII-P--ATLPDRRLFVLKQPVGVAGAITPWNFPLAM 185 (509)
Q Consensus 109 ~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 185 (509)
++++|++++++|+|||..+++.|+..+++.++|++.+.+++.+... + ....+...++.++|+|||++|+|||||+.+
T Consensus 88 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 167 (503)
T 3iwj_A 88 KKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLM 167 (503)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHH
Confidence 9999999999999999999999999999999999999888766542 1 112356788999999999999999999999
Q ss_pred HHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHH
Q 010482 186 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 265 (509)
Q Consensus 186 ~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 265 (509)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|+
T Consensus 168 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 247 (503)
T 3iwj_A 168 ATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIM 247 (503)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCC
Q 010482 266 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 345 (509)
Q Consensus 266 ~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~ 345 (509)
+.++.++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 248 ~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 327 (503)
T 3iwj_A 248 TAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPL 327 (503)
T ss_dssp HHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC--CCCceeecEEEecCCCCCcccccccccceEEEEEeCCH
Q 010482 346 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 423 (509)
Q Consensus 346 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~ 423 (509)
++++++||++++.+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 328 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 407 (503)
T 3iwj_A 328 EEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTE 407 (503)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCH
Confidence 9999999999999999999999999999999999998653 46899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 424 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 424 ~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus 408 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~ 487 (503)
T 3iwj_A 408 EEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQ 487 (503)
T ss_dssp HHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEE
Confidence 99999999999999999999999999999999999999999987777899999999999999999999999999999988
Q ss_pred ec
Q 010482 504 GD 505 (509)
Q Consensus 504 ~~ 505 (509)
+.
T Consensus 488 ~~ 489 (503)
T 3iwj_A 488 YI 489 (503)
T ss_dssp EC
T ss_pred eC
Confidence 63
No 11
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=3.6e-108 Score=869.85 Aligned_cols=473 Identities=57% Similarity=1.020 Sum_probs=455.1
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999887789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
|++++++|+|||..+++.|+..+++.++|++....+..+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 89 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 168 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 168 (481)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999887776665554445677889999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.+++++
T Consensus 169 ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~ 248 (481)
T 3jz4_A 169 ALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 248 (481)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
+|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++|
T Consensus 249 ~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~g 328 (481)
T 3jz4_A 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIG 328 (481)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBC
T ss_pred CceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhc
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 432 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~ 432 (509)
|++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 329 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~ 408 (481)
T 3jz4_A 329 PLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQAND 408 (481)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHC
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhc
Confidence 99999999999999999999999999999874346799999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 433 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 433 ~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|++++
T Consensus 409 ~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~~ 481 (481)
T 3jz4_A 409 TEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 481 (481)
T ss_dssp SSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEeC
Confidence 9999999999999999999999999999999998877889999999999999999999999999999998764
No 12
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=4.3e-108 Score=871.43 Aligned_cols=473 Identities=35% Similarity=0.575 Sum_probs=448.0
Q ss_pred CCCcCCccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHH
Q 010482 27 SYTPAFSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLL 106 (509)
Q Consensus 27 ~~~~~~~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l 106 (509)
.....+..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|
T Consensus 5 ~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l 84 (505)
T 3prl_A 5 LQTEQFNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLL 84 (505)
T ss_dssp ----CEECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred ccCCccccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 33334456799999999887788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCC-C----CceeEEEeecceEEEEEcCCCh
Q 010482 107 MAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL-P----DRRLFVLKQPVGVAGAITPWNF 181 (509)
Q Consensus 107 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~P~GVv~~i~p~n~ 181 (509)
++++++|++++++|+|||..+++.|+..+++.++|++....+..+...+... + +...++.++|+|||++|+||||
T Consensus 85 ~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~ 164 (505)
T 3prl_A 85 EERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNY 164 (505)
T ss_dssp HHTHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSS
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCcc
Confidence 9999999999999999999999999999999999999998887665433221 2 3567899999999999999999
Q ss_pred hHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHH
Q 010482 182 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 261 (509)
Q Consensus 182 P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g 261 (509)
|+.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|
T Consensus 165 P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 244 (505)
T 3prl_A 165 PVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTG 244 (505)
T ss_dssp TTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhcccc
Q 010482 262 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 341 (509)
Q Consensus 262 ~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~ 341 (509)
+.|++.++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 245 ~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 322 (505)
T 3prl_A 245 ERISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTV 322 (505)
T ss_dssp HHHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhccc
Confidence 99999888 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeC
Q 010482 342 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 421 (509)
Q Consensus 342 G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~ 421 (509)
|||+ +++++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 323 g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 398 (505)
T 3prl_A 323 GSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVK 398 (505)
T ss_dssp SCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeC
Confidence 9999 9999999999999999999999999999999999974 37999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 010482 422 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 500 (509)
Q Consensus 422 ~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~ 500 (509)
|+||||+++|+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|+||+|+++|.+|+++||+.|+
T Consensus 399 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~ 478 (505)
T 3prl_A 399 DANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERV 478 (505)
T ss_dssp SHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEE
T ss_pred CHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEE
Confidence 99999999999999999999999999999999999999999999876 45889999999999999999999999999999
Q ss_pred EEEec
Q 010482 501 VCLGD 505 (509)
Q Consensus 501 ~~~~~ 505 (509)
|+++.
T Consensus 479 v~~~~ 483 (505)
T 3prl_A 479 TVLNL 483 (505)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 98864
No 13
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=5.8e-108 Score=870.81 Aligned_cols=471 Identities=39% Similarity=0.619 Sum_probs=450.1
Q ss_pred ccCeeEcCEeeeCCCCCe-EEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 010482 33 SRQGLIGGKWIDAYDGKT-LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~-~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
..++||||+|+.+.++++ ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 19 ~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 98 (503)
T 1a4s_A 19 DDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRD 98 (503)
T ss_dssp SCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 356899999998766678 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhh
Q 010482 112 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
+|++++++|+|||+.+++.|+..+++.++|++.+.++..+...+.. ++...++.++|+|||++|+|||||+...+++++
T Consensus 99 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 177 (503)
T 1a4s_A 99 NIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCA 177 (503)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHHHH
Confidence 9999999999999999999999999999999999888766543332 344678999999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ ++++.|+.||+|++|+||||+.+|+.|++.++++
T Consensus 178 ~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~ 256 (503)
T 1a4s_A 178 PALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKT 256 (503)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999977 8999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++
T Consensus 257 ~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 336 (503)
T 1a4s_A 257 VKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRM 336 (503)
T ss_dssp TCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred CCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCccc--C----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHH
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRH--S----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 425 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~e 425 (509)
||++++.+++++.++|++++++|+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 337 gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 416 (503)
T 1a4s_A 337 GGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEE 416 (503)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHH
Confidence 999999999999999999999999999999764 1 2579999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 417 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 417 VLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 99999999999999999999999999999999999999998777789999999999999999999999999999998864
No 14
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=3e-107 Score=864.12 Aligned_cols=471 Identities=40% Similarity=0.641 Sum_probs=449.8
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH---hhhcCCHHHHHHHHHHHHHHHHHhH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYDLLMAHK 110 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~~l~~~~ 110 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|+++++.|++++
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 4689999999876678999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHh
Q 010482 111 EELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 189 (509)
Q Consensus 111 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 189 (509)
++|++++++|+|||+.++. .|+..+++.++|++...++..+...+. .++...++.++|+|||++|+|||||+...+++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 179 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHHHH
Confidence 9999999999999999874 699999999999999998877664433 23456789999999999999999999999999
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 259 (501)
T 1bxs_A 180 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 259 (501)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred -cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 270 -GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 270 -~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|++
T Consensus 260 ~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 339 (501)
T 1bxs_A 260 KSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG 339 (501)
T ss_dssp HTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred hccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
+++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 340 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 419 (501)
T 1bxs_A 340 VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIK 419 (501)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999976433579999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++|++.|+|.++.
T Consensus 420 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~ 496 (501)
T 1bxs_A 420 RANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496 (501)
T ss_dssp HHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEcc
Confidence 99999999999999999999999999999999999998766789999999999999999999999999999998864
No 15
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=2.1e-107 Score=864.54 Aligned_cols=465 Identities=35% Similarity=0.584 Sum_probs=441.0
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|..+|.++|++++++|+++.++|
T Consensus 26 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 105 (497)
T 3i44_A 26 RKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDM 105 (497)
T ss_dssp CCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999877789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEE-eecceEEEEEcCCChhHHHHHHhhh
Q 010482 114 GQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVL-KQPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
++++++|+|||+.+++ .|+..+++.+++++............. .+...++. ++|+|||++|+|||||+.+.+++++
T Consensus 106 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 183 (497)
T 3i44_A 106 AKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI--EGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVI 183 (497)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS--TTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc--CCceeEEEeecCceEEEEECCCcchHHHHHHHHH
Confidence 9999999999999999 899999999999998766543322111 13446677 9999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.++++
T Consensus 184 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~ 263 (497)
T 3i44_A 184 PALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNT 263 (497)
T ss_dssp HHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
+||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++
T Consensus 264 ~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~ 342 (497)
T 3i44_A 264 LKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHI 342 (497)
T ss_dssp TCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCB
T ss_pred CCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCc-ccC--CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGR-RHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
||++++.+++++.++|++++++|+++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 343 Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 422 (497)
T 3i44_A 343 GPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVT 422 (497)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHH
Confidence 9999999999999999999999999999994 332 2589999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
++|+++|||+++|||+|.++++++++++++|+||||. ....+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 423 ~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 423 LANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred HHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 9999999999999999999999999999999999994 555688999999999999999999999999999985
No 16
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=2.8e-107 Score=862.65 Aligned_cols=471 Identities=39% Similarity=0.642 Sum_probs=449.5
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|
T Consensus 7 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (479)
T 2imp_A 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEI 86 (479)
T ss_dssp CCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45899999998766789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||+.+++.|+..+++.++|++...++..+...+...++...++.++|+|||++|+|||||+...++++++|
T Consensus 87 a~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 166 (479)
T 2imp_A 87 SALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPA 166 (479)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999988877666543333345567899999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCC
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~ 273 (509)
|++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.+++++|
T Consensus 167 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~ 246 (479)
T 2imp_A 167 LLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNIT 246 (479)
T ss_dssp HHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTC
T ss_pred HHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999777889999999999999999999999999999999999
Q ss_pred eEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCC-CCcccC
Q 010482 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG-EGVVQG 352 (509)
Q Consensus 274 ~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~-~~~~~G 352 (509)
|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+| +++++|
T Consensus 247 ~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~g 326 (479)
T 2imp_A 247 KVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMG 326 (479)
T ss_dssp EEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBC
T ss_pred cEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhc
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 432 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~ 432 (509)
|++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 327 pli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~ 406 (479)
T 2imp_A 327 PLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMAND 406 (479)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHC
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhc
Confidence 99999999999999999999999999999763235799999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 433 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 433 ~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 407 ~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 407 SDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp SSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 999999999999999999999999999999999877678999999999999999999999999999999764
No 17
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=5.3e-107 Score=865.74 Aligned_cols=471 Identities=37% Similarity=0.615 Sum_probs=450.0
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 106 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADEL 106 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45899999998766789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||..+++.|+..+++.++|++.++++..+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 107 a~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 186 (515)
T 2d4e_A 107 AVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPA 186 (515)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHH
Confidence 99999999999999999999999999999998888766544432335567899999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCC
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~ 273 (509)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++++|
T Consensus 187 LaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~ 266 (515)
T 2d4e_A 187 LAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLK 266 (515)
T ss_dssp HHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTC
T ss_pred HHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999777899999999999999999999999999999999999
Q ss_pred eEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCc
Q 010482 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 353 (509)
Q Consensus 274 ~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp 353 (509)
|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|+++++||
T Consensus 267 ~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 346 (515)
T 2d4e_A 267 RLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGP 346 (515)
T ss_dssp EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCC
T ss_pred ceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC--------CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHH
Q 010482 354 LINKAALEKVETFVEDAVSKGAKVLLGGRRHS--------LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 425 (509)
Q Consensus 354 ~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~e 425 (509)
++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|+|+||
T Consensus 347 li~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~de 425 (515)
T 2d4e_A 347 LIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEE 425 (515)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHH
Confidence 99999999999999999999999999997642 2589999999999 99999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 426 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 426 ALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL 505 (515)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence 99999999999999999999999999999999999999998777789999999999999999999999999999998864
No 18
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=3.5e-107 Score=863.49 Aligned_cols=471 Identities=39% Similarity=0.615 Sum_probs=449.6
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH---hhhcCCHHHHHHHHHHHHHHHHHhH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYDLLMAHK 110 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~~l~~~~ 110 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|++++
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 3589999999876678999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHh
Q 010482 111 EELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 189 (509)
Q Consensus 111 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 189 (509)
++|++++++|+|||+.++. .|+..+++.++|++...++..+...+. .++...++.++|+|||++|+|||||+.+.+++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 178 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWK 178 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHHH
Confidence 9999999999999999875 699999999999999988876654433 23456789999999999999999999999999
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.++
T Consensus 179 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa 258 (500)
T 1o04_A 179 LGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 258 (500)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred -cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 270 -GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 270 -~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 259 ~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 338 (500)
T 1o04_A 259 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSK 338 (500)
T ss_dssp HTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred hhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
+++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 339 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 418 (500)
T 1o04_A 339 TEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVG 418 (500)
T ss_dssp CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred CccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999976433579999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++|++.|+|+++.
T Consensus 419 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~ 495 (500)
T 1o04_A 419 RANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495 (500)
T ss_dssp HHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEEC
T ss_pred HHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEec
Confidence 99999999999999999999999999999999999998766789999999999999999999999999999998864
No 19
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.3e-107 Score=869.23 Aligned_cols=468 Identities=36% Similarity=0.597 Sum_probs=448.1
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
..++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++
T Consensus 14 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 93 (517)
T 3r31_A 14 KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDA 93 (517)
T ss_dssp SSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46799999999877788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHh----hhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHH
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR----VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 188 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 188 (509)
|++++++|+|||..++ |+..+++.+++++.+.++ +.+...+. .++. .++.++|+|||++|+|||||+...++
T Consensus 94 la~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~-~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~ 169 (517)
T 3r31_A 94 LSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPL-GGDF-AYTKRVPLGVCVGIGAWNYPQQIACW 169 (517)
T ss_dssp HHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC-SSSE-EEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCccccc-CCCc-ceEEEcCccEEEEECCCcchHHHHHH
Confidence 9999999999999999 999999999999999887 66654443 2344 89999999999999999999999999
Q ss_pred hhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh
Q 010482 189 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268 (509)
Q Consensus 189 ~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 268 (509)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+++|+.|++.+
T Consensus 170 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 248 (517)
T 3r31_A 170 KAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAA 248 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 788999999999999999999999999999999
Q ss_pred hcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 269 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 269 ~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 249 a~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 328 (517)
T 3r31_A 249 AGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYA 328 (517)
T ss_dssp HHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred hcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC---CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 425 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~e 425 (509)
+++||++++.+++++.++|++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 329 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 408 (517)
T 3r31_A 329 THLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDE 408 (517)
T ss_dssp CSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHH
T ss_pred CcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHH
Confidence 9999999999999999999999999999999993121 2589999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 409 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 488 (517)
T 3r31_A 409 VLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVST 488 (517)
T ss_dssp HHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECC
T ss_pred HHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcC
Confidence 99999999999999999999999999999999999999998877889999999999999999999999999999998763
No 20
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=5.1e-107 Score=861.21 Aligned_cols=470 Identities=36% Similarity=0.613 Sum_probs=447.8
Q ss_pred CccCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 010482 32 FSRQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 32 ~~~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
+..++||||+|+.+.+ .+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|+++++
T Consensus 22 ~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (495)
T 1wnd_A 22 MQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQ 100 (495)
T ss_dssp CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456899999998655 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhh
Q 010482 112 ELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 190 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 190 (509)
+|++++++|+|||..+++. |+..+++.+++++..+++..+...+...++...++.++|+|||++|+|||||+...++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (495)
T 1wnd_A 101 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHH
Confidence 9999999999999999998 999999999999998887766544332234467899999999999999999999999999
Q ss_pred hhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc
Q 010482 191 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270 (509)
Q Consensus 191 ~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 270 (509)
++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.+++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~ 259 (495)
T 1wnd_A 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 259 (495)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG
T ss_pred HHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 99999999999888899999999999999999999999999999999
Q ss_pred CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcc
Q 010482 271 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 350 (509)
Q Consensus 271 ~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~ 350 (509)
+++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|++++
T Consensus 260 ~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 339 (495)
T 1wnd_A 260 SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTE 339 (495)
T ss_dssp GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCC
T ss_pred cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCC-CEEEeCCc-ccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 351 QGPLINKAALEKVETFVEDAVSKG-AKVLLGGR-RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 351 ~Gp~i~~~~~~~~~~~i~~a~~~G-a~~~~gg~-~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
+||++++.+++++.++|++++++| +++++||. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 340 ~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 418 (495)
T 1wnd_A 340 LGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVN 418 (495)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHH
Confidence 999999999999999999999999 99999997 53 2579999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 419 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 419 WANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 9999999999999999999999999999999999998776778999999999999999999999999999999764
No 21
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.6e-107 Score=865.88 Aligned_cols=469 Identities=34% Similarity=0.564 Sum_probs=447.8
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH--hhhcCCHHHHHHHHHHHHHHHHHhHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE 111 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 111 (509)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|+++++.|+++++
T Consensus 9 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (495)
T 3b4w_A 9 DKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKD 88 (495)
T ss_dssp SSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3589999999876678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhh
Q 010482 112 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 190 (509)
Q Consensus 112 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 190 (509)
+|++++++|+|||+.+++ .|+..+++.++|++...++..+...+.. .+...++.++|+|||++|+|||||+...++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (495)
T 3b4w_A 89 LFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTG-SYGQSIVSREPVGVVGAIVAWNVPLFLAVNKI 167 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEE-TTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceEEEEEccCceEEEECCCcchHHHHHHHH
Confidence 999999999999999998 8999999999999998887766543321 23467899999999999999999999999999
Q ss_pred hhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc
Q 010482 191 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270 (509)
Q Consensus 191 ~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 270 (509)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+++|+.|++.+++
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 246 (495)
T 3b4w_A 168 APALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE 246 (495)
T ss_dssp HHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999 88899999999999999999999999999999999
Q ss_pred CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcc
Q 010482 271 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 350 (509)
Q Consensus 271 ~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~ 350 (509)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++++
T Consensus 247 ~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 326 (495)
T 3b4w_A 247 MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQ 326 (495)
T ss_dssp TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCC
T ss_pred cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC--CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 351 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 351 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
+||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 327 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 406 (495)
T 3b4w_A 327 IGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIA 406 (495)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHH
Confidence 99999999999999999999999999999997643 2579999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|+++|||+++|||+|.++++++++++++|+||||++. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 407 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 407 IANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp HHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred HHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence 999999999999999999999999999999999999877 7789999999999999999999999999999998764
No 22
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.1e-107 Score=867.18 Aligned_cols=472 Identities=27% Similarity=0.461 Sum_probs=448.5
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|
T Consensus 27 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 106 (521)
T 4e4g_A 27 LGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNEL 106 (521)
T ss_dssp ECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||..+++.|+..+++.++|++.....+.+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 107 a~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~A 186 (521)
T 4e4g_A 107 AEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPA 186 (521)
T ss_dssp HHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999988877766543322345668899999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCC
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~ 273 (509)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ .+.++.|+.||+|++|+||||+++|+.|++.+++++|
T Consensus 187 LaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lk 265 (521)
T 4e4g_A 187 IACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGK 265 (521)
T ss_dssp HHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999994 5677999999999999999999999999999999999
Q ss_pred eEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 274 ~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~-v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++++|+|+++++++|
T Consensus 266 pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~g 345 (521)
T 4e4g_A 266 RAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMG 345 (521)
T ss_dssp EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBC
T ss_pred CeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccC
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
|++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 346 pli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 425 (521)
T 4e4g_A 346 PVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALS 425 (521)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHH
Confidence 999999999999999999999999999997531 3589999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCCccCCCCCCCC--CCChHHHHHhhheeeEEEEec
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G--~~~g~~~l~~~~~~k~~~~~~ 505 (509)
++|+++|||+++|||+|.++++++++++++|+||||++... .+.+||||+|+||+| +++|.+|+++||+.|+|++++
T Consensus 426 ~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 505 (521)
T 4e4g_A 426 LPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRW 505 (521)
T ss_dssp HHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECC
T ss_pred HHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEec
Confidence 99999999999999999999999999999999999997654 478999999999999 789999999999999998864
Q ss_pred c
Q 010482 506 M 506 (509)
Q Consensus 506 ~ 506 (509)
.
T Consensus 506 ~ 506 (521)
T 4e4g_A 506 P 506 (521)
T ss_dssp C
T ss_pred C
Confidence 3
No 23
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=2.5e-106 Score=863.32 Aligned_cols=468 Identities=31% Similarity=0.501 Sum_probs=447.6
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
.++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++
T Consensus 38 ~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (538)
T 3qan_A 38 YPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHE 115 (538)
T ss_dssp ECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999997 578999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHH-HHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEE-AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
|++++++|+|||+.+++.|+..+++.++|++.. .....+...+.. ++...++.++|+|||++|+|||||+.+.+++++
T Consensus 116 la~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 194 (538)
T 3qan_A 116 FSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSR-PGEQNRYFYTPMGVTVTISPWNFALAIMVGTAV 194 (538)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCCC-TTEEEEEEEEECCEEEEECCSTTTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccc-CCcceeeecCCCcEEEEECCCchHHHHHHHHHH
Confidence 999999999999999999999999999999998 566666544432 356788999999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.++.+
T Consensus 195 ~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 274 (538)
T 3qan_A 195 APIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVV 274 (538)
T ss_dssp HHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSC
T ss_pred HHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999988
Q ss_pred ------CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCC
Q 010482 272 ------VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 345 (509)
Q Consensus 272 ------~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~ 345 (509)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 275 ~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~ 354 (538)
T 3qan_A 275 RPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPT 354 (538)
T ss_dssp CTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTT
T ss_pred cccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHH
Q 010482 346 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 425 (509)
Q Consensus 346 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~e 425 (509)
|+++++||++++.+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 355 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~de 433 (538)
T 3qan_A 355 NRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDH 433 (538)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHH
Confidence 99999999999999999999999999999 99999987533689999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEEC-CCCCC-CCCCCccCCCCCCCC-CCChHHHHHhhheeeEEE
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN-EGLIS-TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN-~~~~~-~~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~~~ 502 (509)
||+++|+++|||+++|||+|.++++++++++++|+|||| ++... .+.+||||+|+||+| +++|.+|+++||+.|+|+
T Consensus 434 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~ 513 (538)
T 3qan_A 434 ALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVS 513 (538)
T ss_dssp HHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEE
T ss_pred HHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEE
Confidence 999999999999999999999999999999999999999 55554 789999999999999 999999999999999998
Q ss_pred Eec
Q 010482 503 LGD 505 (509)
Q Consensus 503 ~~~ 505 (509)
++.
T Consensus 514 ~~~ 516 (538)
T 3qan_A 514 EMY 516 (538)
T ss_dssp EEC
T ss_pred Eec
Confidence 864
No 24
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=4.8e-106 Score=856.01 Aligned_cols=471 Identities=38% Similarity=0.631 Sum_probs=452.1
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 7 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 86 (490)
T 2ve5_A 7 QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDEL 86 (490)
T ss_dssp BCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999998777889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhh-HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 114 GQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
++++++|+|||..+++. |+..+++.+++++.+.+...+...+. ..+...++.++|+|||++|+|||||+.+.++++++
T Consensus 87 a~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ 165 (490)
T 2ve5_A 87 AALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAP 165 (490)
T ss_dssp HHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE-ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeeEeeccccEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999997 99999999999999988776654432 23567889999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh-hcC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA-AGT 271 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~-~~~ 271 (509)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.+ +.+
T Consensus 166 ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~~ 245 (490)
T 2ve5_A 166 ALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 245 (490)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhcc
Confidence 9999999999999999999999999999999999999999998889999999999999999999999999999999 899
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++++
T Consensus 246 l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~~~~ 325 (490)
T 2ve5_A 246 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNF 325 (490)
T ss_dssp CCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred ccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHH
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 427 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai 427 (509)
||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 326 gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi 405 (490)
T 2ve5_A 326 GPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAI 405 (490)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHHHHH
Confidence 9999999999999999999999999999997632 257999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 428 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 428 ~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+++++||+.|+|+++.
T Consensus 406 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~~~~ 483 (490)
T 2ve5_A 406 RRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp HHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCCCCCCCCcchHHHHHHhheeEEEEEcc
Confidence 999999999999999999999999999999999999998777789999999999999999999999999999998864
No 25
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.1e-105 Score=852.24 Aligned_cols=471 Identities=32% Similarity=0.549 Sum_probs=428.2
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|
T Consensus 7 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (485)
T 4dng_A 7 NKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDI 86 (485)
T ss_dssp CSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998777889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCC-CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
++++++|+|||+.+++.|+..+++.+++++...+.+.+...+.. .++...++.++|+|||++|+|||||+...++++++
T Consensus 87 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 166 (485)
T 4dng_A 87 IMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAP 166 (485)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999887766654432 34567899999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHH-HHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 193 ALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~-~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
||++||+||+|||+.+|+++ ..|.++|.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.++++
T Consensus 167 ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~ 246 (485)
T 4dng_A 167 AIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRA 246 (485)
T ss_dssp HHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhh
Confidence 99999999999999999999 99999999999999999999998778999999999999999999999999999999999
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|+++++
T Consensus 247 ~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~ 326 (485)
T 4dng_A 247 FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVV 326 (485)
T ss_dssp TCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSB
T ss_pred ccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHh
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 431 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n 431 (509)
||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 327 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an 403 (485)
T 4dng_A 327 GPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMAN 403 (485)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHh
Confidence 99999999999999999999999999999976 479999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEeccC
Q 010482 432 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 507 (509)
Q Consensus 432 ~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~~~ 507 (509)
+++|||+++|||+|.++++++++++++|+||||++... .+.+||||+|.||+|+++|.+++++||+.|+|+++.-+
T Consensus 404 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~~ 480 (485)
T 4dng_A 404 DTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQY 480 (485)
T ss_dssp CSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEEEC--
T ss_pred CCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEecCC
Confidence 99999999999999999999999999999999998754 68899999999999999999999999999999887543
No 26
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=4.3e-106 Score=853.87 Aligned_cols=468 Identities=58% Similarity=0.986 Sum_probs=447.7
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+. .+++++||+||+++++++.++.+|++.|+++|++||+.|+.+|.++|.++|+++++.|++++++|
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 90 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDL 90 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3589999999853 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||..+++.|+..+++.++|++.+.++..+...+...++...++.++|+|||++|+|||||+...++++++|
T Consensus 91 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 170 (487)
T 2w8n_A 91 ARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAA 170 (487)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999999888766654432345677899999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeec---CCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM---GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 270 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~---g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 270 (509)
|++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+ |++.++++.|++||+|++|+||||+++|+.|++.+++
T Consensus 171 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~ 250 (487)
T 2w8n_A 171 LAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAAN 250 (487)
T ss_dssp HHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHT
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999 8777899999999999999999999999999999999
Q ss_pred CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhc-cccCCCCCCCc
Q 010482 271 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFGEGV 349 (509)
Q Consensus 271 ~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~-~~~G~p~~~~~ 349 (509)
+++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|||.++++
T Consensus 251 ~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~ 330 (487)
T 2w8n_A 251 SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGT 330 (487)
T ss_dssp TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTC
T ss_pred cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCc-eeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT-FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~-~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
++||++++.+++++.++|++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 331 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~ 409 (487)
T 2w8n_A 331 TQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIA 409 (487)
T ss_dssp CBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999764 2578 999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 410 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 410 IANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp HHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred HHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 9999999999999999999999999999999999999877777899999999999999999999999999999875
No 27
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.6e-105 Score=853.63 Aligned_cols=470 Identities=34% Similarity=0.561 Sum_probs=433.4
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 13 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 92 (508)
T 3r64_A 13 TKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEI 92 (508)
T ss_dssp TSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 56899999998777889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCC-CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
++++++|+|||..+++.|+..+++.+++++.+.+...+ ..+.. .++...++.++|+|||++|+|||||+...++++++
T Consensus 93 a~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 171 (508)
T 3r64_A 93 VEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAP 171 (508)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999988877665 43332 34567899999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHH-HHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhc-
Q 010482 193 ALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG- 270 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~-~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~- 270 (509)
||++||+||+|||+.+|+++ ..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.+++
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~ 251 (508)
T 3r64_A 172 ALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAING 251 (508)
T ss_dssp HHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSS
T ss_pred HHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcc
Confidence 99999999999999999999 9999999999999999999999878999999999999999999999999999999998
Q ss_pred -CCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCc
Q 010482 271 -TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349 (509)
Q Consensus 271 -~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~ 349 (509)
+++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+++++
T Consensus 252 ~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 331 (508)
T 3r64_A 252 GPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGT 331 (508)
T ss_dssp SSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSC
T ss_pred cCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 429 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l 429 (509)
++||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 332 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 408 (508)
T 3r64_A 332 LVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAEL 408 (508)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999999999976 3799999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEeccC
Q 010482 430 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 507 (509)
Q Consensus 430 ~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~~~ 507 (509)
+|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|.+|+++||+.|+|+++...
T Consensus 409 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~~ 487 (508)
T 3r64_A 409 ANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRSA 487 (508)
T ss_dssp HTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEEEEEECCS
T ss_pred HhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEeccc
Confidence 9999999999999999999999999999999999998754 68899999999999999999999999999999887543
No 28
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1.3e-105 Score=848.61 Aligned_cols=457 Identities=38% Similarity=0.647 Sum_probs=432.6
Q ss_pred eeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 010482 36 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 115 (509)
Q Consensus 36 ~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 115 (509)
+||||+|+++ ++ ++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999985 55 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhh
Q 010482 116 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 195 (509)
Q Consensus 116 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 195 (509)
++++|+|||..+++.|+..+++.++|++...++..+...+.. +...++.++|+|||++|+|||||+.+.++++++||+
T Consensus 79 ~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 156 (486)
T 3pqa_A 79 ILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPSD--DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIA 156 (486)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCT--TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC--CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988766654432 567889999999999999999999999999999999
Q ss_pred CCCEEEecCCCCCHHHHHHHHHHHHHc----CCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC
Q 010482 196 CGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 271 (509)
Q Consensus 196 aGN~vVlkps~~~p~~~~~l~~~l~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 271 (509)
+||+||+|||+.+|+++..|++++.++ |+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.++
T Consensus 157 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa-- 234 (486)
T 3pqa_A 157 TGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG-- 234 (486)
T ss_dssp TTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--
Confidence 999999999999999999999999999 99999999999988888999999999999999999999999999887
Q ss_pred CCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCccc
Q 010482 272 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 351 (509)
Q Consensus 272 ~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~ 351 (509)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++
T Consensus 235 ~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 314 (486)
T 3pqa_A 235 FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDV 314 (486)
T ss_dssp SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSB
T ss_pred CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHh
Q 010482 352 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 431 (509)
Q Consensus 352 Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n 431 (509)
||++++.+++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|
T Consensus 315 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN 389 (486)
T 3pqa_A 315 GPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIAN 389 (486)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHh
Confidence 99999999999999999999999999999975 3699999999 9999999999999999999999999 99999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 432 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 432 ~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 390 ~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~ 463 (486)
T 3pqa_A 390 STEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS 463 (486)
T ss_dssp CSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEE
T ss_pred cCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEc
Confidence 9999999999999999999999999999999999865 335899999999999999999999999999999875
No 29
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.3e-105 Score=848.16 Aligned_cols=454 Identities=30% Similarity=0.491 Sum_probs=437.8
Q ss_pred eEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh
Q 010482 50 TLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV 129 (509)
Q Consensus 50 ~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 129 (509)
+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCH
Q 010482 130 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 209 (509)
Q Consensus 130 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p 209 (509)
.|+..+++.++|++...++..+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 85 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp 163 (484)
T 3ros_A 85 EEVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVP 163 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEECC-TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeccC-CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 9999999999999999888776644332 456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcC
Q 010482 210 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 289 (509)
Q Consensus 210 ~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~ 289 (509)
+++..|++++.++|+|+|++|+|+|++.++++ |+.||+|++|+||||+++|+.|++.+++++||+++|||||||+||++
T Consensus 164 ~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~ 242 (484)
T 3ros_A 164 GSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLD 242 (484)
T ss_dssp HHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECT
T ss_pred HHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCC
Confidence 99999999999999999999999998888888 99999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHH
Q 010482 290 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 369 (509)
Q Consensus 290 daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~ 369 (509)
|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++||++++.+++++.++|++
T Consensus 243 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 322 (484)
T 3ros_A 243 DADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKE 322 (484)
T ss_dssp TCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHH
Q 010482 370 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 449 (509)
Q Consensus 370 a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~ 449 (509)
++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 323 a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a 402 (484)
T 3ros_A 323 AIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRA 402 (484)
T ss_dssp HHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHH
T ss_pred HHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 99999999999986445689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 450 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 450 ~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
+++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 403 ~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 403 KKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp HHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECG
T ss_pred HHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECC
Confidence 99999999999999998777899999999999999999999999999999998863
No 30
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=5.6e-105 Score=844.15 Aligned_cols=463 Identities=33% Similarity=0.564 Sum_probs=441.4
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+++.+ +++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++.++|
T Consensus 5 ~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 82 (475)
T 1euh_A 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKI 82 (475)
T ss_dssp CCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 35899999998633 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCC----cee-EEEeecceEEEEEcCCChhHHHHHH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPD----RRL-FVLKQPVGVAGAITPWNFPLAMITR 188 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n~P~~~~~~ 188 (509)
++++++|+|||+.+++.|+..+++.++|++.+.++..+...+...++ ... ++.++|+|||++|+|||||+.+.++
T Consensus 83 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 162 (475)
T 1euh_A 83 GAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGS 162 (475)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHHH
Confidence 99999999999999999999999999999998877666543322234 456 8999999999999999999999999
Q ss_pred hhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh
Q 010482 189 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 268 (509)
Q Consensus 189 ~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 268 (509)
++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.+
T Consensus 163 ~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~a 242 (475)
T 1euh_A 163 KIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA 242 (475)
T ss_dssp HHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999997778999999999999999999999999999988
Q ss_pred hcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 010482 269 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 348 (509)
Q Consensus 269 ~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~ 348 (509)
+ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.| +
T Consensus 243 a--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~ 319 (475)
T 1euh_A 243 G--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED-D 319 (475)
T ss_dssp T--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-T
T ss_pred C--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-c
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHH
Q 010482 349 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 428 (509)
Q Consensus 349 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~ 428 (509)
+++||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~ 396 (475)
T 1euh_A 320 ADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIE 396 (475)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHH
Confidence 99999999999999999999999999999999975 369999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECC-CCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 429 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 429 l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~-~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
++|+++|||+++|||+|.++++++++++++|+||||+ +....+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 397 ~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 397 ISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp HHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred HHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 9999999999999999999999999999999999998 666678999999999999999999999999999999875
No 31
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=5e-105 Score=848.33 Aligned_cols=468 Identities=29% Similarity=0.495 Sum_probs=442.5
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.+.||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 24 ~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 101 (500)
T 2j6l_A 24 NEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVL 101 (500)
T ss_dssp EECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999995 5689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||..+++.|+..+++.++|++.+.+++.+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 102 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 181 (500)
T 2j6l_A 102 GSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIA 181 (500)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHH
Confidence 99999999999999999999999999999988877666544433344556789999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHH----HcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELAL----QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~----~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
|++||+||+|||+.+|+++..|++++. ++|+|+|++|+|+| +.++++.|+.||+|++|+||||+++|+.|++.++
T Consensus 182 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa 260 (500)
T 2j6l_A 182 MICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQ 260 (500)
T ss_dssp HHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhc
Confidence 999999999999999999999888765 56999999999999 7889999999999999999999999999999999
Q ss_pred cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCc
Q 010482 270 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349 (509)
Q Consensus 270 ~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~ 349 (509)
++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||.++++
T Consensus 261 ~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 340 (500)
T 2j6l_A 261 ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNV 340 (500)
T ss_dssp HTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred cCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 429 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l 429 (509)
++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 341 ~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 420 (500)
T 2j6l_A 341 LYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAW 420 (500)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999764335799999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHHH--hhccceEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 430 ANDTNAGLAAYIFTNNLQRTWRVS--EALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 430 ~n~~~~gl~asv~t~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
+|+++|||+++|||+|.+++++++ .++++|+||||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 421 aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 421 NNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp HHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred HhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999 779999999998654 346899999999999999999999999999999875
No 32
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=8.6e-105 Score=844.39 Aligned_cols=471 Identities=32% Similarity=0.536 Sum_probs=445.2
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|
T Consensus 6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 85 (486)
T 1t90_A 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEEL 85 (486)
T ss_dssp CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998766789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||+.+++.|+..+++.+++++...+...+...+...++...++.++|+|||++|+|||||+...++++++|
T Consensus 86 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~A 165 (486)
T 1t90_A 86 AHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMA 165 (486)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHH
Confidence 99999999999999999999999999999877777666543322234567899999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCC
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~ 273 (509)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+++|+.|++.++++++
T Consensus 166 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~ 244 (486)
T 1t90_A 166 IALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLK 244 (486)
T ss_dssp HHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999 56789999999999999999999999999999999999
Q ss_pred eEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCe-EEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 274 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR-VLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 274 ~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~r-v~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
|+++|||||||+||++|||++.|++.+++++|.|+||.|++++| +|||++ ||+|+++|+++++++++|+|+++++++|
T Consensus 245 pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~g 323 (486)
T 1t90_A 245 RVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLG 323 (486)
T ss_dssp EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBC
T ss_pred cEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccC
Confidence 99999999999999999999999999999999999999999999 999999 9999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC-CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHh
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 431 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n 431 (509)
|++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 324 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN 403 (486)
T 1t90_A 324 PVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIAN 403 (486)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHh
Confidence 999999999999999999999999999997432 2579999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCCccCCCCCCCC--CCChHHHHHhhheeeEEEEecc
Q 010482 432 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLGDM 506 (509)
Q Consensus 432 ~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G--~~~g~~~l~~~~~~k~~~~~~~ 506 (509)
+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|.||+| +++|.+|+++||+.|+|.++..
T Consensus 404 ~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~~ 481 (486)
T 1t90_A 404 KSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARYP 481 (486)
T ss_dssp HSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEECC
T ss_pred CCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEecC
Confidence 9999999999999999999999999999999998654 3478999999999999 8999999999999999988653
No 33
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1.9e-104 Score=846.98 Aligned_cols=467 Identities=31% Similarity=0.513 Sum_probs=441.9
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCC-CCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~-~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
.++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++
T Consensus 38 ~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (516)
T 1uzb_A 38 YPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRE 115 (516)
T ss_dssp ECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 357999999963 6789999999 6999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccC-CCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 191 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 191 (509)
|++++++|+|||+.+++.|+..+++.++||+...++..+...+ ...++...++.++|+|||++|+|||||+.+.+++++
T Consensus 116 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 195 (516)
T 1uzb_A 116 LEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIV 195 (516)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHH
Confidence 9999999999999999999999999999999998887765432 223455678999999999999999999999999999
Q ss_pred hHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh--
Q 010482 192 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-- 269 (509)
Q Consensus 192 ~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~-- 269 (509)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+++|+.|++.++
T Consensus 196 ~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~ 275 (516)
T 1uzb_A 196 GPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRL 275 (516)
T ss_dssp HHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSC
T ss_pred HHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999987889999999999999999999999999999998
Q ss_pred ----cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCC
Q 010482 270 ----GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 345 (509)
Q Consensus 270 ----~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~ 345 (509)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus 276 ~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p- 354 (516)
T 1uzb_A 276 APGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA- 354 (516)
T ss_dssp CTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-
T ss_pred cccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC-
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHH
Q 010482 346 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 425 (509)
Q Consensus 346 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~e 425 (509)
++++++||++++.+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 355 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~e 433 (516)
T 1uzb_A 355 EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAE 433 (516)
T ss_dssp GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHH
T ss_pred ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHH
Confidence 99999999999999999999999999999 89999976323579999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC--CCCCCCccCCCCCCCC-CCChHHHHHhhheeeEEE
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~~~ 502 (509)
||+++|+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|.||+| +++|.+++++||+.|+|+
T Consensus 434 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~ 513 (516)
T 1uzb_A 434 ALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVA 513 (516)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEE
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEE
Confidence 9999999999999999999999999999999999999998654 3578999999999999 579999999999999997
Q ss_pred Ee
Q 010482 503 LG 504 (509)
Q Consensus 503 ~~ 504 (509)
++
T Consensus 514 ~~ 515 (516)
T 1uzb_A 514 ER 515 (516)
T ss_dssp EE
T ss_pred ec
Confidence 74
No 34
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=4.8e-105 Score=847.98 Aligned_cols=463 Identities=31% Similarity=0.510 Sum_probs=441.9
Q ss_pred CeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhH-hhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 35 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 35 ~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
++||||+|+.+ + .+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|+++++.|++++++|
T Consensus 20 ~~~i~g~~~~~-~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 97 (501)
T 1uxt_A 20 PSYLAGEWGGS-G-QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVF 97 (501)
T ss_dssp CEECSSSEECC-S-CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ceeECCEEecC-C-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 57999999986 3 7899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCC--CC--CceeEEEeecceEEEEEcCCChhHHHHHHh
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT--LP--DRRLFVLKQPVGVAGAITPWNFPLAMITRK 189 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 189 (509)
++++++|+|||..+++.|+..+++.++|++.+.++..+...+.. .. +...++.++|+|||++|+|||||+.+.+++
T Consensus 98 a~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (501)
T 1uxt_A 98 AEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNK 177 (501)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999998877766543332 12 336789999999999999999999999999
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ ++++.|++||+|++|+||||+++|+.|++.++
T Consensus 178 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa 256 (501)
T 1uxt_A 178 ITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVKVGG 256 (501)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC
T ss_pred HHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999977 89999999999999999999999999999888
Q ss_pred cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCc
Q 010482 270 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 349 (509)
Q Consensus 270 ~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~ 349 (509)
++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||.|+++
T Consensus 257 --l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 334 (501)
T 1uxt_A 257 --VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTV 334 (501)
T ss_dssp --SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred --CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCC-ceeecEEEecCC---CCCcccccccccceEEEEEeCCHHH
Q 010482 350 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYEPTVLSNVK---SEMLVSREEVFGPVAPLLCFKTEEE 425 (509)
Q Consensus 350 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~~~~eE~fgPv~~v~~~~~~~e 425 (509)
++||++++.+++++.++|++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+|+||
T Consensus 335 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~de 411 (501)
T 1uxt_A 335 DVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQ 411 (501)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHH
Confidence 9999999999999999999999999999999975 46 899999999999 9999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCC-CCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 426 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG-LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 426 ai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~-~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
||+++|+++|||+++|||+|.++++++++++++|+|+||++ ....+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 412 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~ 491 (501)
T 1uxt_A 412 AIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFN 491 (501)
T ss_dssp HHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEE
T ss_pred HHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEe
Confidence 99999999999999999999999999999999999999987 55678999999999999999999999999999999886
Q ss_pred c
Q 010482 505 D 505 (509)
Q Consensus 505 ~ 505 (509)
.
T Consensus 492 ~ 492 (501)
T 1uxt_A 492 Y 492 (501)
T ss_dssp C
T ss_pred c
Confidence 3
No 35
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=9.1e-105 Score=843.72 Aligned_cols=463 Identities=36% Similarity=0.592 Sum_probs=421.3
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|
T Consensus 8 ~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 87 (478)
T 3ty7_A 8 TKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDI 87 (478)
T ss_dssp CEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred hhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46899999999877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHH-hhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 114 GQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
++++++|+|||..++ +.|+..+++.+++++....+..+... ....++.++|+|||++|+|||||+...++++++
T Consensus 88 a~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (478)
T 3ty7_A 88 VQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAA 162 (478)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHHHH
Confidence 999999999999999 78999999999999998877655431 245788999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~ 242 (478)
T 3ty7_A 163 AFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDF 242 (478)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTT
T ss_pred HHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred CeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccC
Q 010482 273 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 352 (509)
Q Consensus 273 ~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~G 352 (509)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++|
T Consensus 243 ~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 322 (478)
T 3ty7_A 243 KKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVG 322 (478)
T ss_dssp CEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred CceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcc-cC--CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 010482 353 PLINKAALEKVETFVEDAVSKGAKVLLGGRR-HS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 429 (509)
Q Consensus 353 p~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~-~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l 429 (509)
|++++.+++++.+++++++++|+++++||.. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 323 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~ 402 (478)
T 3ty7_A 323 PIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQI 402 (478)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHH
Confidence 9999999999999999999999999999943 22 35899999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEE
Q 010482 430 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 502 (509)
Q Consensus 430 ~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 502 (509)
+|+++|||+++|||+|.++++++++++++|+||||+ ....+.+||||+|+||+|+++|.+|+++||+.|+|+
T Consensus 403 an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 403 ANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp HTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEE
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 999999999999999999999999999999999999 555678999999999999999999999999999986
No 36
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=6.8e-103 Score=826.54 Aligned_cols=456 Identities=35% Similarity=0.545 Sum_probs=437.8
Q ss_pred CCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 010482 48 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE 127 (509)
Q Consensus 48 ~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 127 (509)
..+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+
T Consensus 6 ~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T 3etf_A 6 ATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQ 85 (462)
T ss_dssp CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred cCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCC
Q 010482 128 AVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 207 (509)
Q Consensus 128 a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~ 207 (509)
++.|+..+++.+++++.......+.. +...++...++.++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 86 a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~ 164 (462)
T 3etf_A 86 ARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPN 164 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCC
Confidence 99999999999999999988776654 33334567889999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEE
Q 010482 208 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV 287 (509)
Q Consensus 208 ~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV 287 (509)
+|+++..|+++|.++|+|+|++|+|+| +.+.++.|+.||+|+.|+||||+++|+.|++.++++++|+++|+|||||+||
T Consensus 165 tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV 243 (462)
T 3etf_A 165 VTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV 243 (462)
T ss_dssp CHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEE
T ss_pred CcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEE
Confidence 999999999999999999999999999 4678899999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHH
Q 010482 288 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 367 (509)
Q Consensus 288 ~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i 367 (509)
++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.++++++||++++.+++++.+++
T Consensus 244 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i 323 (462)
T 3etf_A 244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQV 323 (462)
T ss_dssp CTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q 010482 368 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 447 (509)
Q Consensus 368 ~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~ 447 (509)
++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 324 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~ 403 (462)
T 3etf_A 324 QASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDT 403 (462)
T ss_dssp HHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHH
T ss_pred HHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 99999999999999865446899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 448 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 448 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
+++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 404 ~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 404 LAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp HHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 9999999999999999998877789999999999999999999999999999998764
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=2.5e-102 Score=833.98 Aligned_cols=470 Identities=23% Similarity=0.353 Sum_probs=439.6
Q ss_pred ccCeeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHh-H
Q 010482 33 SRQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH-K 110 (509)
Q Consensus 33 ~~~~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~-~ 110 (509)
..++||||+|+.+ +..+.++||.| |+++++++.++.+|+++|+++|++||+.|+++|.++|.++|++++++|+++ +
T Consensus 63 ~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ 140 (563)
T 4e3x_A 63 AIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRR 140 (563)
T ss_dssp ECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTH
T ss_pred cCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccH
Confidence 4568999999985 44778999998 899999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHHHcCCCHHHHhhH-HHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHh
Q 010482 111 EELGQLITLEQGKPLKEAVGE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 189 (509)
Q Consensus 111 ~~la~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 189 (509)
++|+.++++|+|||..+++.| +..+++++++++..+.++.+.......++...+.++.|+|||++|+|||||+....++
T Consensus 141 ~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~ 220 (563)
T 4e3x_A 141 AEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLA 220 (563)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHHHH
Confidence 999999999999999999887 9999999999999998877653222222344567777889999999999999999999
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
++||| +||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|++.++++.|++||+|++|+||||+++|+.|++.++
T Consensus 221 ~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa 299 (563)
T 4e3x_A 221 GAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVA 299 (563)
T ss_dssp HHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHH
Confidence 99999 59999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred cCCC------eEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCC
Q 010482 270 GTVK------KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 343 (509)
Q Consensus 270 ~~~~------~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~ 343 (509)
++++ |+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++||
T Consensus 300 ~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGd 379 (563)
T 4e3x_A 300 QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGD 379 (563)
T ss_dssp HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred hhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCC
Confidence 8887 5999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCcccCcccCHHHHHHHHHHHHHHHH-CCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeC
Q 010482 344 G-FGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 421 (509)
Q Consensus 344 p-~~~~~~~Gp~i~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~ 421 (509)
| .|+++++||++++.+++++.++|+++++ +|+++++||..+...|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 380 p~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 459 (563)
T 4e3x_A 380 PAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYP 459 (563)
T ss_dssp TTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEEC
T ss_pred cccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEEC
Confidence 9 9999999999999999999999999996 8999999998764568999999999999999999999999999999999
Q ss_pred C--HHHHHHHH-hcCCCCcEEEEEcCCHHHHHHHHhhcc--ceEEEECCCCC--CCCCCCccCCCCCCCC-CCChHHHHH
Q 010482 422 T--EEEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLI--STEVAPFGGVKQSGLG-REGSKYGMD 493 (509)
Q Consensus 422 ~--~~eai~l~-n~~~~gl~asv~t~d~~~~~~~~~~l~--~G~v~iN~~~~--~~~~~pfGG~k~SG~G-~~~g~~~l~ 493 (509)
| +||||+++ |+++|||+++|||+|.+++++++++++ +|+||||++.. ..+.+||||+|.||+| +++|.++|+
T Consensus 460 d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~ 539 (563)
T 4e3x_A 460 DDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYIL 539 (563)
T ss_dssp GGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGG
T ss_pred CCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHH
Confidence 7 79999999 799999999999999999999999976 99999998754 3478999999999998 899999999
Q ss_pred hhheeeEEEEec
Q 010482 494 EFLEIKYVCLGD 505 (509)
Q Consensus 494 ~~~~~k~~~~~~ 505 (509)
+|++.|+|..+.
T Consensus 540 ~~~~~k~v~~~~ 551 (563)
T 4e3x_A 540 RWTSPQVIKETH 551 (563)
T ss_dssp GGBCCEEEEEEC
T ss_pred HhCceEEEEEeC
Confidence 999999998764
No 38
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.9e-101 Score=815.78 Aligned_cols=461 Identities=30% Similarity=0.458 Sum_probs=435.9
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 113 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 113 (509)
.++||||+|+++ ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|
T Consensus 6 ~~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 84 (490)
T 3ju8_A 6 STHYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADEL 84 (490)
T ss_dssp CCEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999986 3578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhH
Q 010482 114 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 193 (509)
Q Consensus 114 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 193 (509)
++++++|+|||..+++.|+..+++.++|++...+...+...+. ..+...++.++|+|||++|+|||||+.+.++++++|
T Consensus 85 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 163 (490)
T 3ju8_A 85 ARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGP-LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPA 163 (490)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEE-ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHH
Confidence 9999999999999999999999999999998887766654321 123456778999999999999999999999999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCC
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 273 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~ 273 (509)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+++|+.|++.++++++
T Consensus 164 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~ 242 (490)
T 3ju8_A 164 LLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQ 242 (490)
T ss_dssp HHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTT
T ss_pred HHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCC
Confidence 99999999999999999999999999999999999999999 67899999999999999999999999999999999999
Q ss_pred eE-EeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhh-HHHHHHHHHHHHhccccCC-CCCCCcc
Q 010482 274 KV-SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGD-GFGEGVV 350 (509)
Q Consensus 274 ~~-~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v-~~~f~~~l~~~~~~~~~G~-p~~~~~~ 350 (509)
|+ ++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |.|++++
T Consensus 243 ~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~ 322 (490)
T 3ju8_A 243 KILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPF 322 (490)
T ss_dssp SEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCS
T ss_pred CcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCc
Confidence 98 8999999999999999999999999999999999999999999999996 9999999999999999999 9999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 010482 351 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 430 (509)
Q Consensus 351 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~ 430 (509)
+||++++.+++++.+++++++++|+++++||.....+|+|++|||+. ++++|++++||+||||++|++|+|+||||+++
T Consensus 323 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~a 401 (490)
T 3ju8_A 323 MGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREA 401 (490)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHH
T ss_pred cccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999997654568999999999 99999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 431 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 431 n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
|+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|.||++ ++++||+.|+|++.
T Consensus 402 N~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~ 470 (490)
T 3ju8_A 402 NATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYP 470 (490)
T ss_dssp HCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEE
T ss_pred hcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEe
Confidence 99999999999999999999999999999999998765 4578999999999985 58999999988775
No 39
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=6.4e-101 Score=812.88 Aligned_cols=455 Identities=29% Similarity=0.430 Sum_probs=429.5
Q ss_pred CCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 010482 47 DGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 126 (509)
Q Consensus 47 ~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 126 (509)
+.++++++||+||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||+.
T Consensus 4 ~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 82 (474)
T 4h7n_A 4 MTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS- 82 (474)
T ss_dssp CCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-
T ss_pred CCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-
Confidence 5689999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred HHhhHHHHHHHHHHHHHHHHHhhhccc-cCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCC
Q 010482 127 EAVGEVDYGAKFIEFYAEEAKRVYGEI-IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 205 (509)
Q Consensus 127 ~a~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps 205 (509)
++..|++.+++.+++++..+.+..... .....++......++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 83 ~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps 162 (474)
T 4h7n_A 83 ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS 162 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence 556799999999999988876654332 2233445667788999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCce
Q 010482 206 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPC 285 (509)
Q Consensus 206 ~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~ 285 (509)
+.+|+++..+.+++.++|+|+|++|+++| +.+.+..|+.| +++|+||||+.+|+.|++.++++++|+++|||||||+
T Consensus 163 ~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~ 239 (474)
T 4h7n_A 163 EIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPA 239 (474)
T ss_dssp TTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEE
T ss_pred ccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhcccccccccCCCcCcc
Confidence 99999999999999999999999999999 56788899976 7899999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHH
Q 010482 286 IVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 365 (509)
Q Consensus 286 iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~ 365 (509)
||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|.++++++||++++.+++++.+
T Consensus 240 iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~ 319 (474)
T 4h7n_A 240 IVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIIND 319 (474)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHH
T ss_pred ccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCEEEeCCcccC-CCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcC
Q 010482 366 FVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 444 (509)
Q Consensus 366 ~i~~a~~~Ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~ 444 (509)
++++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 320 ~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~ 399 (474)
T 4h7n_A 320 HILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAG 399 (474)
T ss_dssp HHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECS
T ss_pred HHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeC
Confidence 99999999999999998754 56899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhccceEEEECCCCC--CCCCCCccCCCCCCCC-CCChHHHHHhhheeeEEEEec
Q 010482 445 NLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 445 d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|.+|+++||+.|+|+++.
T Consensus 400 d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~ 463 (474)
T 4h7n_A 400 SEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKT 463 (474)
T ss_dssp SHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEEC
T ss_pred CHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECC
Confidence 999999999999999999998765 3478999999999998 789999999999999999873
No 40
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=8.6e-100 Score=856.08 Aligned_cols=470 Identities=30% Similarity=0.458 Sum_probs=446.6
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCC-CCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
.++||||+|+. ++.+++++||+| ++++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus 532 ~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~e 609 (1026)
T 4f9i_A 532 YPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFE 609 (1026)
T ss_dssp ECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999997 468999999998 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhh
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 192 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 192 (509)
|++++++|+|||..+++.|+..++++++||+..++++.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 610 La~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ 689 (1026)
T 4f9i_A 610 LSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASA 689 (1026)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999998876654333235667889999999999999999999999999999
Q ss_pred HhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh---
Q 010482 193 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA--- 269 (509)
Q Consensus 193 ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~--- 269 (509)
||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|.+.++
T Consensus 690 ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~ 769 (1026)
T 4f9i_A 690 AIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVH 769 (1026)
T ss_dssp HHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCC
T ss_pred HHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhccc
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999988
Q ss_pred ---cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCC
Q 010482 270 ---GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 346 (509)
Q Consensus 270 ---~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~ 346 (509)
.+++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|+|||+++||+|+++|+++++++++|+|.|
T Consensus 770 ~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d 849 (1026)
T 4f9i_A 770 PGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSED 849 (1026)
T ss_dssp TTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTS
T ss_pred ccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCccc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHH
Q 010482 347 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 426 (509)
Q Consensus 347 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~ea 426 (509)
+++++||++++.+++++.++|++++++| ++++||..++..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 850 ~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deA 928 (1026)
T 4f9i_A 850 PANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQA 928 (1026)
T ss_dssp TTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHH
T ss_pred ccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHH
Confidence 9999999999999999999999999999 999999765434899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCCccCCCCCCCCC-CChHHHHHhhheeeEEEE
Q 010482 427 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 427 i~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~-~~g~~~l~~~~~~k~~~~ 503 (509)
|+++|+++|||+++|||+|.+.++++++++++|+||||+.... .+.+||||+|.||+|+ ++|++++++|++.|+|++
T Consensus 929 I~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~ 1008 (1026)
T 4f9i_A 929 IEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTE 1008 (1026)
T ss_dssp HHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEE
T ss_pred HHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEE
Confidence 9999999999999999999999999999999999999987653 4789999999999994 699999999999999988
Q ss_pred ecc
Q 010482 504 GDM 506 (509)
Q Consensus 504 ~~~ 506 (509)
+..
T Consensus 1009 ~~~ 1011 (1026)
T 4f9i_A 1009 NTM 1011 (1026)
T ss_dssp ECC
T ss_pred ecc
Confidence 754
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=2.1e-99 Score=811.94 Aligned_cols=464 Identities=22% Similarity=0.325 Sum_probs=425.3
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHh-hHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
.++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+.|+.+|.++|.++|+++++.|++++++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 46899999997643 579999999999999999988 9999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhhhc-------cccCCCCCCc-eeEEEeecc-eEEEEEcCCChhH
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG-------EIIPATLPDR-RLFVLKQPV-GVAGAITPWNFPL 183 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~P~-GVv~~i~p~n~P~ 183 (509)
|++++++|+|||+.+++.|+..+++.+++|+..++++.+ ...+...++. ..+..++|+ |||++|+|||||+
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~ 165 (534)
T 2y53_A 86 YYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPS 165 (534)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHH
Confidence 999999999999999999999999999999998876643 2112211222 457889997 9999999999999
Q ss_pred HHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcC-CCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHH
Q 010482 184 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 262 (509)
Q Consensus 184 ~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 262 (509)
.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|++.++++.| +++++|+||||+++|+
T Consensus 166 ~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~~G~ 242 (534)
T 2y53_A 166 WGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSADTAA 242 (534)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 79999999999665544433 5789999999999999
Q ss_pred HHHHHhh--cCCCeEEeecCCCCceEEcCCC-----CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHH
Q 010482 263 KLMAGAA--GTVKKVSLELGGNAPCIVFDDA-----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 335 (509)
Q Consensus 263 ~i~~~~~--~~~~~~~lelgG~~~~iV~~da-----Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~ 335 (509)
.|++.++ +++||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 243 ~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 322 (534)
T 2y53_A 243 TLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAK 322 (534)
T ss_dssp HHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHH
T ss_pred HHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHHH
Confidence 9998875 8899999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCccc-----C-CCCceeecEEEecCCCC--Ccccc
Q 010482 336 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-----S-LGMTFYEPTVLSNVKSE--MLVSR 407 (509)
Q Consensus 336 ~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-----~-~~g~~~~Ptvl~~~~~~--~~~~~ 407 (509)
++++++|||+|+++++||++++.+++++.++|+++ .+|+++++||... + ..|+|++|||+.+++++ |++++
T Consensus 323 ~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~ 401 (534)
T 2y53_A 323 LAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHD 401 (534)
T ss_dssp HTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTT
T ss_pred HHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHh
Confidence 99999999999999999999999999999999999 6899999999742 1 24799999999999987 68999
Q ss_pred cccccceEEEEEeC---CH-----HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhc--cceEEEECCCCC---------
Q 010482 408 EEVFGPVAPLLCFK---TE-----EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLI--------- 468 (509)
Q Consensus 408 eE~fgPv~~v~~~~---~~-----~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l--~~G~v~iN~~~~--------- 468 (509)
||+||||++|++|+ |+ ||||+++|+++|||+++|||+|.++++++++++ ++|+||||++..
T Consensus 402 eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~ 481 (534)
T 2y53_A 402 VEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGN 481 (534)
T ss_dssp CCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSC
T ss_pred CCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCC
Confidence 99999999999999 99 999999999999999999999999999999999 899999998642
Q ss_pred CCCCCCccCCCCCCCCCC-ChHHHHHhhheeeEEEE
Q 010482 469 STEVAPFGGVKQSGLGRE-GSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 469 ~~~~~pfGG~k~SG~G~~-~g~~~l~~~~~~k~~~~ 503 (509)
..+.+||||+|+||+|++ +|.+++++|++.|++..
T Consensus 482 ~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~ 517 (534)
T 2y53_A 482 VMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQA 517 (534)
T ss_dssp CCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEE
T ss_pred CCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeec
Confidence 357899999999999999 79999999999999865
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=2.9e-97 Score=781.50 Aligned_cols=443 Identities=26% Similarity=0.393 Sum_probs=401.6
Q ss_pred CeEEeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Q 010482 49 KTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA 128 (509)
Q Consensus 49 ~~~~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 128 (509)
..+++.||.||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 85 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred h-hHHHHHHHHHHHHHHHHHhhhccc-cCC--CCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecC
Q 010482 129 V-GEVDYGAKFIEFYAEEAKRVYGEI-IPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 204 (509)
Q Consensus 129 ~-~ev~~~~~~l~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkp 204 (509)
+ .|+..+++.+++++...++..+.. .+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 86 ~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 165 (457)
T 3lns_A 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKP 165 (457)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 8 599999999999998887654321 111 123456889999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCc
Q 010482 205 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP 284 (509)
Q Consensus 205 s~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~ 284 (509)
|+.+|+++..|++++.++ +|+|++|+|+| +.+.++.|++ ++|++|+||||+++|+.|++.++++++|+++|||||||
T Consensus 166 s~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p 242 (457)
T 3lns_A 166 SETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCP 242 (457)
T ss_dssp CTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEE
T ss_pred CCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCC
Confidence 999999999999999999 99999999999 6788999998 78999999999999999999999999999999999999
Q ss_pred eEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHH
Q 010482 285 CIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 364 (509)
Q Consensus 285 ~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~ 364 (509)
+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++||++++.+++++.
T Consensus 243 ~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~ 317 (457)
T 3lns_A 243 LIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLV 317 (457)
T ss_dssp EEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHH
T ss_pred CeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987 7776 999999999999999
Q ss_pred HHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhc-CCCCcEEEEEc
Q 010482 365 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND-TNAGLAAYIFT 443 (509)
Q Consensus 365 ~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~-~~~gl~asv~t 443 (509)
++++++ ++++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||+++|||
T Consensus 318 ~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t 393 (457)
T 3lns_A 318 SLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFG 393 (457)
T ss_dssp HHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEEC
T ss_pred HHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEEC
Confidence 999985 36999999764 35799999999999999999999999999999999999999999999 99999999999
Q ss_pred CCHHHHHHHHhhccceEEEECCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 010482 444 NNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 503 (509)
Q Consensus 444 ~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 503 (509)
+|.++++++++++++|+||||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus 394 ~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 394 KDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp SCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEE
T ss_pred CCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEe
Confidence 9999999999999999999999754 46899999999999999999999999999999976
No 43
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1e-95 Score=770.37 Aligned_cols=428 Identities=29% Similarity=0.444 Sum_probs=396.4
Q ss_pred CCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-hHHHHHHHHHHHHHHHH
Q 010482 68 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEA 146 (509)
Q Consensus 68 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~ 146 (509)
.+.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++..+++++...
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35679999999999999999999999999999999999999999999999999999999997 59999999888887766
Q ss_pred HhhhccccC---CCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcC
Q 010482 147 KRVYGEIIP---ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG 223 (509)
Q Consensus 147 ~~~~~~~~~---~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aG 223 (509)
......... ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a- 173 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY- 173 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-
Confidence 544322111 1112456889999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHH
Q 010482 224 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 303 (509)
Q Consensus 224 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~ 303 (509)
+|+|++|+|+|+ .+.+..|+.| +|++|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.++++
T Consensus 174 lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~ 251 (469)
T 3sza_A 174 LDKDLYPVINGG-VPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWG 251 (469)
T ss_dssp SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHH
T ss_pred CCcceEEEEECC-HHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHH
Confidence 999999999994 4556678877 79999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcc
Q 010482 304 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 383 (509)
Q Consensus 304 ~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~ 383 (509)
+|.|+||.|++++|||||+++||+|+++|+++++++ +|+|.++++++||++++.+++++.+++ +|+++++||..
T Consensus 252 ~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~ 325 (469)
T 3sza_A 252 KFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTG 325 (469)
T ss_dssp HHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCE
T ss_pred HHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCcc
Confidence 999999999999999999999999999999999998 699999999999999999999999998 69999999987
Q ss_pred cCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccceEEEE
Q 010482 384 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGV 463 (509)
Q Consensus 384 ~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~G~v~i 463 (509)
+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|||
T Consensus 326 ~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~v 404 (469)
T 3sza_A 326 D-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAA 404 (469)
T ss_dssp E-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEE
T ss_pred C-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 5 357999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC--CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 464 NEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 464 N~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|++.. ..+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 405 N~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 405 NDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp SCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred eCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 99763 4689999999999999999999999999999998863
No 44
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=8e-95 Score=775.38 Aligned_cols=451 Identities=25% Similarity=0.325 Sum_probs=414.2
Q ss_pred cCeeEcCEeeeCCCCCeEEeecCCCCCEEE-EEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 010482 34 RQGLIGGKWIDAYDGKTLEVHNPATGEVIA-NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 112 (509)
Q Consensus 34 ~~~~I~g~~~~~~~~~~~~~~~p~~g~~i~-~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 112 (509)
.++||||+|+.+. . ++||+||++++ +++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++
T Consensus 30 ~~~~I~G~~~~~~--~---v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 104 (528)
T 3v4c_A 30 GKHLVAGEWLDGA--G---TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEA 104 (528)
T ss_dssp CCEEETTEEECCS--S---EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cCceECCEEecCC--C---ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4689999999853 2 99999999998 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHHHHHhh--hcccc----CCC--CCCceeEEEeecceEEEEEcCCChhHH
Q 010482 113 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV--YGEII----PAT--LPDRRLFVLKQPVGVAGAITPWNFPLA 184 (509)
Q Consensus 113 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~--~~~~~----~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~ 184 (509)
|++++++|+|||+.+++.|+..+++.++||+...++. .+... +.. .++...++.++|+|||++|+|||||+.
T Consensus 105 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 184 (528)
T 3v4c_A 105 ITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLA 184 (528)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHH
Confidence 9999999999999999999999999999999988762 22211 111 123457899999999999999999999
Q ss_pred HHH--HhhhhHhhCCCEEEecCCCCCHHHHHHHHHHH----HHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCH
Q 010482 185 MIT--RKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 258 (509)
Q Consensus 185 ~~~--~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l----~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~ 258 (509)
+.+ +++++||++||+||+|||+.+|+++..|++++ .++|+|+|++|+|+|++.+++++|++||+|++|+||||+
T Consensus 185 ~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~ 264 (528)
T 3v4c_A 185 FSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSL 264 (528)
T ss_dssp TSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCH
T ss_pred HhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCh
Confidence 865 89999999999999999999999999998865 578999999999999888899999999999999999999
Q ss_pred HHHHHHHHHhhcCC--CeEEeecCCCCceEEcCCC---CHHHHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHHHHH
Q 010482 259 AVGKKLMAGAAGTV--KKVSLELGGNAPCIVFDDA---DLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAF 332 (509)
Q Consensus 259 ~~g~~i~~~~~~~~--~~~~lelgG~~~~iV~~da---Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~-v~~~f~~~l 332 (509)
++|+.|++.+++++ +|+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ +||+|+++|
T Consensus 265 ~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l 344 (528)
T 3v4c_A 265 AGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAA 344 (528)
T ss_dssp HHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHHHHH
Confidence 99999999999998 9999999999999999999 88999999999999999999999999999997 999999999
Q ss_pred HHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCC---Ccccccc
Q 010482 333 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE---MLVSREE 409 (509)
Q Consensus 333 ~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~eE 409 (509)
+++++++++| +.+||++++.+.+++.++++ ++|+++++||.. .|+|++|||+.+++++ |++++||
T Consensus 345 ~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~~~i~~eE 412 (528)
T 3v4c_A 345 VEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLADHALGEE 412 (528)
T ss_dssp HHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHHCGGGGCC
T ss_pred HHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccccChhhccc
Confidence 9999998653 67899999888888887764 489999999975 4799999999988887 8999999
Q ss_pred cccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcC--CHHHHHHHHhhcc--ceEEEECCCCC---CCCCCCccC-CCCC
Q 010482 410 VFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN--NLQRTWRVSEALE--YGLVGVNEGLI---STEVAPFGG-VKQS 481 (509)
Q Consensus 410 ~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~--d~~~~~~~~~~l~--~G~v~iN~~~~---~~~~~pfGG-~k~S 481 (509)
+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+||||+++. ..+.+|||| +|.|
T Consensus 413 iFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~S 492 (528)
T 3v4c_A 413 VFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPAS 492 (528)
T ss_dssp CSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTB
T ss_pred ccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999 8999999999998 99999999654 357899999 9999
Q ss_pred CCCCCC--hHHHHHhhheeeEE
Q 010482 482 GLGREG--SKYGMDEFLEIKYV 501 (509)
Q Consensus 482 G~G~~~--g~~~l~~~~~~k~~ 501 (509)
|+|+++ |.+|+++||+.|++
T Consensus 493 g~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 493 TNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp SCTTCCSSSGGGGGGGEEEEEE
T ss_pred CCCCCCCCcHHHHHHhchhHHh
Confidence 999985 99999999999864
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.2e-92 Score=755.42 Aligned_cols=444 Identities=20% Similarity=0.253 Sum_probs=407.0
Q ss_pred CCCCCeEEeecCCCCCEE-EEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC
Q 010482 45 AYDGKTLEVHNPATGEVI-ANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGK 123 (509)
Q Consensus 45 ~~~~~~~~~~~p~~g~~i-~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk 123 (509)
+.++++++++||+||+++ ++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 82 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL 82 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 345778999999999999 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhhHHHHHHHHHHHHHHHHHh--hhcccc----CCCCC-C-ceeEEEeecceEEEEEcCCChhHHHH--HHhhhhH
Q 010482 124 PLKEAVGEVDYGAKFIEFYAEEAKR--VYGEII----PATLP-D-RRLFVLKQPVGVAGAITPWNFPLAMI--TRKVGPA 193 (509)
Q Consensus 124 ~~~~a~~ev~~~~~~l~~~~~~~~~--~~~~~~----~~~~~-~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l~~A 193 (509)
|+.+++.|+..+++.++||+...++ ..+... +...+ + ...++.++|+|||++|+|||||+... .+++++|
T Consensus 83 ~~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~A 162 (510)
T 1ez0_A 83 PEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASA 162 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHH
Confidence 9999999999999999999998875 322221 11111 1 23678999999999999999999985 4999999
Q ss_pred hhCCCEEEecCCCCCHHHHHHHHHHH----HHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 194 LACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 194 LaaGN~vVlkps~~~p~~~~~l~~~l----~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
|++||+||+|||+.+|+++..|++++ .++|+|+|++|+|+|.+.++++.|++||+|++|+||||+.+|+.|++.++
T Consensus 163 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa 242 (510)
T 1ez0_A 163 LAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAH 242 (510)
T ss_dssp HHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhh
Confidence 99999999999999999999999987 56899999999999977889999999999999999999999999999999
Q ss_pred cCC--CeEEeecCCCCceEEcCCCCHH--HHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHHHHHHHHHhccccCCC
Q 010482 270 GTV--KKVSLELGGNAPCIVFDDADLN--VAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDG 344 (509)
Q Consensus 270 ~~~--~~~~lelgG~~~~iV~~daDl~--~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~-v~~~f~~~l~~~~~~~~~G~p 344 (509)
+++ ||+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++++
T Consensus 243 ~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~--- 319 (510)
T 1ez0_A 243 ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP--- 319 (510)
T ss_dssp HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC---
T ss_pred ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC---
Confidence 886 9999999999999999999999 99999999999999999999999999999 999999999999999874
Q ss_pred CCCCcccCcccCHHHHHHHHHHHHHHHH-CCCEEEeCCcccCCCCceeecEEEecCCCC---CcccccccccceEEEEEe
Q 010482 345 FGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSE---MLVSREEVFGPVAPLLCF 420 (509)
Q Consensus 345 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~eE~fgPv~~v~~~ 420 (509)
||++++.+.+++.++++++++ +|+++++||. . |+|++|||+.+++++ |++++||+||||++|++|
T Consensus 320 -------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~-~---g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~ 388 (510)
T 1ez0_A 320 -------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA-E---SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVC 388 (510)
T ss_dssp -------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC-C---TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEE
T ss_pred -------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC-C---CCEecCEEEEecCCccccCHHHcCCccCCeEEEEEe
Confidence 688899999999999999984 8999999997 2 799999999988777 999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEEcCCH--HHHHHHHhhc--cceEEEECCCCC---CCCCCCccC-CCCCCCCCC--ChHH
Q 010482 421 KTEEEAIHMANDTNAGLAAYIFTNNL--QRTWRVSEAL--EYGLVGVNEGLI---STEVAPFGG-VKQSGLGRE--GSKY 490 (509)
Q Consensus 421 ~~~~eai~l~n~~~~gl~asv~t~d~--~~~~~~~~~l--~~G~v~iN~~~~---~~~~~pfGG-~k~SG~G~~--~g~~ 490 (509)
+|+||||+++|+++|||+++|||+|. ++++++++++ ++|+||||++.. ..+.+|||| +|.||+|+. +|.+
T Consensus 389 ~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~ 468 (510)
T 1ez0_A 389 ENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAE 468 (510)
T ss_dssp SSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGG
T ss_pred CCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHH
Confidence 99999999999999999999999987 7999999999 799999998764 357899999 799999854 8999
Q ss_pred HHHhhheeeEEE
Q 010482 491 GMDEFLEIKYVC 502 (509)
Q Consensus 491 ~l~~~~~~k~~~ 502 (509)
|+++|++.|++.
T Consensus 469 gl~~~~~~k~~~ 480 (510)
T 1ez0_A 469 AIHRWLRPVAYQ 480 (510)
T ss_dssp GGGGGEEEEEEE
T ss_pred HHHHhheEEEEc
Confidence 999999998753
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=4.5e-91 Score=783.67 Aligned_cols=436 Identities=26% Similarity=0.415 Sum_probs=411.2
Q ss_pred EcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhhHHHHHHHHHHHHHH
Q 010482 65 VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 144 (509)
Q Consensus 65 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~ 144 (509)
++.++.+|++.|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.++..|+..+++.++||+.
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccccCC-CCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcC
Q 010482 145 EAKRVYGEIIPA-TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG 223 (509)
Q Consensus 145 ~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aG 223 (509)
..++..+..... ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++|
T Consensus 624 ~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAG 703 (1001)
T 3haz_A 624 QGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAG 703 (1001)
T ss_dssp HHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred HHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhC
Confidence 998876643221 2235678899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC---CCeEEeecCCCCceEEcCCCCHHHHHHHH
Q 010482 224 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT---VKKVSLELGGNAPCIVFDDADLNVAVNGA 300 (509)
Q Consensus 224 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~---~~~~~lelgG~~~~iV~~daDl~~a~~~i 300 (509)
+|+|++|+|+|++.+ ++.|+.||+|++|+||||+++|+.|++.++++ ++|+++|+|||||+||++|||++.|++.+
T Consensus 704 lP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~i 782 (1001)
T 3haz_A 704 IPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDV 782 (1001)
T ss_dssp CCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHH
T ss_pred cCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHH
Confidence 999999999998777 99999999999999999999999999998864 89999999999999999999999999999
Q ss_pred HHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEEeC
Q 010482 301 LAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 380 (509)
Q Consensus 301 ~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~~g 380 (509)
++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++| ++ +|
T Consensus 783 v~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~g 860 (1001)
T 3haz_A 783 VTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HF 860 (1001)
T ss_dssp HHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EE
T ss_pred HHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-ec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888 88 88
Q ss_pred CcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHhhccc
Q 010482 381 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT--EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY 458 (509)
Q Consensus 381 g~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~--~~eai~l~n~~~~gl~asv~t~d~~~~~~~~~~l~~ 458 (509)
|..+ .+|+|++|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.++++++++++++
T Consensus 861 g~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~a 937 (1001)
T 3haz_A 861 AGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQV 937 (1001)
T ss_dssp ECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCC
T ss_pred cccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCe
Confidence 8765 3589999999985 6889999999999999999996 799999999999999999999999999999999999
Q ss_pred eEEEECCCCCC--CCCCCccCCCCCCCC-CCChHHHHHhhheeeEEEEecc
Q 010482 459 GLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLGDM 506 (509)
Q Consensus 459 G~v~iN~~~~~--~~~~pfGG~k~SG~G-~~~g~~~l~~~~~~k~~~~~~~ 506 (509)
|+||||++... .+.+||||+|.||+| +++|++++++|++.|+|+++..
T Consensus 938 G~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~~ 988 (1001)
T 3haz_A 938 GNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINTA 988 (1001)
T ss_dssp SEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEECG
T ss_pred eeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECCc
Confidence 99999997653 367899999999999 5799999999999999998643
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.1e-85 Score=690.13 Aligned_cols=405 Identities=16% Similarity=0.141 Sum_probs=338.2
Q ss_pred EeecCCCCCEEEEEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc-------CCC
Q 010482 52 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQ-------GKP 124 (509)
Q Consensus 52 ~~~~p~~g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~-------Gk~ 124 (509)
-++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred HH----HHhhHHHHHHHHHHHHHHHHHhhhccccCCC--CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCC
Q 010482 125 LK----EAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGC 198 (509)
Q Consensus 125 ~~----~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN 198 (509)
+. +++.|+..+++.+++++..+++..+...+.. .++...++.++|+|||++|+||| |.... +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 98 4678999999999999988777666543221 13445789999999999999776 76666 89999999999
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHc----CCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCe
Q 010482 199 TVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 274 (509)
Q Consensus 199 ~vVlkps~~~p~~~~~l~~~l~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~ 274 (509)
+||+|||+.+|+++..|++++.++ | |+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++.++ +||
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~p 243 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIP 243 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSC
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCC
Confidence 999999999999999999999999 9 9999999999 6788999999999999999999999999999887 899
Q ss_pred EEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcc
Q 010482 275 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 354 (509)
Q Consensus 275 ~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~ 354 (509)
+++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||+++|| ||+
T Consensus 244 v~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p~ 297 (463)
T 2h5g_A 244 VMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TPL 297 (463)
T ss_dssp BCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SHH
T ss_pred EEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hHH
Confidence 999999999999999999999999999999999 999999999999999998 343
Q ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCC
Q 010482 355 INKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN 434 (509)
Q Consensus 355 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~ 434 (509)
++ +++++++++|++++.|+... ..++|+ +++|++++||+||||++|++|+|+||||+++|+++
T Consensus 298 -----~~---~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~ 360 (463)
T 2h5g_A 298 -----FD---QIIDMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYG 360 (463)
T ss_dssp -----HH---HHHHHHHHTTCEEEECHHHH-C-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHC
T ss_pred -----HH---HHHHHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCC
Confidence 23 35788888999998555432 234443 57899999999999999999999999999999999
Q ss_pred CCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCC--CC--ChHHHHHhhheeeEEEEec
Q 010482 435 AGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG--RE--GSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 435 ~gl~asv~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G--~~--~g~~~l~~~~~~k~~~~~~ 505 (509)
|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+| ++ +|.+|+++||+.|+|.++.
T Consensus 361 ~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 361 SSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp CSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred CCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 99999999999999999999999999999998777789999999999999 75 9999999999999998763
No 48
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=6.9e-83 Score=671.95 Aligned_cols=395 Identities=19% Similarity=0.183 Sum_probs=326.9
Q ss_pred HHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHh-hHHHH-HHHHHHHHHHH
Q 010482 72 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL----KEAV-GEVDY-GAKFIEFYAEE 145 (509)
Q Consensus 72 ~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~-~ev~~-~~~~l~~~~~~ 145 (509)
.+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||. .+++ .|+.. ++..+++++..
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 488999999999999999999999999999999999999999999999999998 8885 78988 88999999988
Q ss_pred HHhhh------ccccCCC-C-CCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHH
Q 010482 146 AKRVY------GEIIPAT-L-PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAE 217 (509)
Q Consensus 146 ~~~~~------~~~~~~~-~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~ 217 (509)
.+... +...+.. . .+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..|++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 87765 3322211 1 2345689999999999999999 9 8999999999999999999999999999999999
Q ss_pred HHH----H----cCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcC
Q 010482 218 LAL----Q----AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 289 (509)
Q Consensus 218 ~l~----~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~ 289 (509)
++. + +|+|+|++|+|+ ++.++++.|+.||+|++|+||||+++|+.|++.+ +||+++|||||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 8 999999999999 6668899999999999999999999999999877 799999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhcccc---CCCCCCCcccCcccCHHHHHHHHHH
Q 010482 290 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV---GDGFGEGVVQGPLINKAALEKVETF 366 (509)
Q Consensus 290 daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~---G~p~~~~~~~Gp~i~~~~~~~~~~~ 366 (509)
|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |||.+ .++
T Consensus 249 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHH
T ss_pred CCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcc
Confidence 99999999999999999999 99999999999999 9999999999999987 88743 344
Q ss_pred -HHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCC
Q 010482 367 -VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 445 (509)
Q Consensus 367 -i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d 445 (509)
+++++ ++++||. | +.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 310 ~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 376 (468)
T 1vlu_A 310 YFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTEN 376 (468)
T ss_dssp HHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSC
T ss_pred cccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCC
Confidence 56654 3666775 3 689987 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccceEEEECCCCCCCCCCCcc-----CCCCCCCCCCChHHHHHhhheeeEEEEec
Q 010482 446 LQRTWRVSEALEYGLVGVNEGLISTEVAPFG-----GVKQSGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 446 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfG-----G~k~SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
.++++++++++++|+||||++....+.+||| |+|.||+|++ |.+|+++|++.|+|.++.
T Consensus 377 ~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 377 KANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp HHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEECS
T ss_pred HHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 9999999999999999999987777889999 9999999999 999999999999998763
No 49
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=6.6e-82 Score=665.79 Aligned_cols=417 Identities=18% Similarity=0.248 Sum_probs=370.5
Q ss_pred EEcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh-HHHHHHHHHHHH
Q 010482 64 NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFY 142 (509)
Q Consensus 64 ~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~ 142 (509)
+++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++. +...+++.+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~ 84 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNY 84 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHh
Confidence 3456678999999999999999999999999999999999999999999999999999999988854 334444444333
Q ss_pred HHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHH----HH
Q 010482 143 AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA----EL 218 (509)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~----~~ 218 (509)
.... +..+.. . ..++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++ ++
T Consensus 85 ~~~~-~~~g~~-~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~ 161 (464)
T 3k9d_A 85 IKDM-KTIGML-K-EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEA 161 (464)
T ss_dssp HTTC-CCSEEE-E-EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hhcc-ccccee-c-cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHH
Confidence 2211 111211 1 123566789999999999999999999999999999999999999999999999998755 55
Q ss_pred HHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecC-CCCceEEcCCCCHHHHH
Q 010482 219 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIVFDDADLNVAV 297 (509)
Q Consensus 219 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelg-G~~~~iV~~daDl~~a~ 297 (509)
+.++|+|+|++|+|+|++.+.++.|++||+|++|+||||+.+ .+.+++++||+ +|+| ||+|+||++|||++.|+
T Consensus 162 ~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa 236 (464)
T 3k9d_A 162 AEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAV 236 (464)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHH
T ss_pred HHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHH
Confidence 789999999999999988899999999999999999999984 55667788998 8888 99999999999999999
Q ss_pred HHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHH-------hccccCCCC-CCCcccCcccCHHHHHHHHHHHHH
Q 010482 298 NGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV-------KNLKVGDGF-GEGVVQGPLINKAALEKVETFVED 369 (509)
Q Consensus 298 ~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~-------~~~~~G~p~-~~~~~~Gp~i~~~~~~~~~~~i~~ 369 (509)
+.+++|+|+|+||.|++++|||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.++++.
T Consensus 237 ~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~ 316 (464)
T 3k9d_A 237 KHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGL 316 (464)
T ss_dssp HHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999986 467899998 788999999999999999999998
Q ss_pred HHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHH----HHHhcCCCCcEEEEEcCC
Q 010482 370 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI----HMANDTNAGLAAYIFTNN 445 (509)
Q Consensus 370 a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai----~l~n~~~~gl~asv~t~d 445 (509)
++.+|+++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+++|||+|
T Consensus 317 a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d 381 (464)
T 3k9d_A 317 TVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSED 381 (464)
T ss_dssp CCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSC
T ss_pred hhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCC
Confidence 88899999998853 467788865 89999999999999999997 799999999999999999
Q ss_pred HHHHHHHHhhccceEEEECCCCC---------CCCCCCccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 010482 446 LQRTWRVSEALEYGLVGVNEGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 504 (509)
Q Consensus 446 ~~~~~~~~~~l~~G~v~iN~~~~---------~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 504 (509)
.+++++|++++++|+||||++.. ..+.+|||| +.+|.|.++|..++++|++.|+|...
T Consensus 382 ~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 382 KEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp HHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred HHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 99999999999999999999764 468899998 77899999999999999999999764
No 50
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.4e-80 Score=648.60 Aligned_cols=388 Identities=21% Similarity=0.228 Sum_probs=346.2
Q ss_pred HHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHh--------hHHHHHHH
Q 010482 70 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL----KEAV--------GEVDYGAK 137 (509)
Q Consensus 70 ~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~ev~~~~~ 137 (509)
-+++++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||. .+++ .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999986 5553 68999999
Q ss_pred HHHHHHHHHHhhhccccCCC--CCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHH
Q 010482 138 FIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 215 (509)
Q Consensus 138 ~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l 215 (509)
.+++|+.+.+. .+...+.. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p-~-~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l 169 (427)
T 1o20_A 93 ACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR-P-NVTVETTILALKSGNTILLRGGSDALNSNKAI 169 (427)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC-T-HHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC-h-HHHHHHHHHHHHcCCEEEEECCHhHHHHHHHH
Confidence 99999987654 33322211 12345688999999999999986 4 68889999999999999999999999999999
Q ss_pred HHHHH----HcCCCCccEEeecCC-chhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCC
Q 010482 216 AELAL----QAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 290 (509)
Q Consensus 216 ~~~l~----~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~d 290 (509)
++++. ++|+|+|++|+|+|. ..++++.|..||+|++|+||||+++|+.|++.+ .+|+++|||||||+||++|
T Consensus 170 ~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~d 246 (427)
T 1o20_A 170 VSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDES 246 (427)
T ss_dssp HHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeCC
Confidence 99998 789999999999984 456888999999999999999999999999887 6999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHH
Q 010482 291 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 370 (509)
Q Consensus 291 aDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a 370 (509)
||++.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 247 ADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------- 297 (427)
T 1o20_A 247 ADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE---------------------------- 297 (427)
T ss_dssp SCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE----------------------------
T ss_pred CCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe----------------------------
Confidence 9999999999999999999 99999999999999999999999999988652
Q ss_pred HHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHH
Q 010482 371 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 450 (509)
Q Consensus 371 ~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~~ 450 (509)
+.||... .+ |+ ||| ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 298 -------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 363 (427)
T 1o20_A 298 -------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAK 363 (427)
T ss_dssp -------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHH
T ss_pred -------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHH
Confidence 2233321 12 33 885 3467899999999999999999999999999999999999999999999999
Q ss_pred HHHhhccceEEEECCCCCCCCCCCccCCCCCCCC----CCChHHHHHhhheeeEEEEecc
Q 010482 451 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGMDEFLEIKYVCLGDM 506 (509)
Q Consensus 451 ~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~l~~~~~~k~~~~~~~ 506 (509)
++++++++|+||||++....+.+||||.|+||+| +++|.+|+++||+.|+|.+++.
T Consensus 364 ~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 364 KFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp HHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred HHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECCC
Confidence 9999999999999987766788999999999997 4689999999999999988753
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=3.1e-80 Score=649.17 Aligned_cols=389 Identities=20% Similarity=0.203 Sum_probs=335.6
Q ss_pred HHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHh--------hHHHHHHH
Q 010482 70 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK----EAV--------GEVDYGAK 137 (509)
Q Consensus 70 ~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~ev~~~~~ 137 (509)
.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+.. +++ .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999853 554 37899999
Q ss_pred HHHHHHHHHHhhhccccCC--CCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHH
Q 010482 138 FIEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 215 (509)
Q Consensus 138 ~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l 215 (509)
.+++++.+.+. .+...+. ...+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..|
T Consensus 105 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDP-IGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhccc-cCccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 99999887643 2333222 123456789999999999999999 8 58889999999999999999999999999999
Q ss_pred HHHH----HHcCCCCccEEeecCCch-hhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCC
Q 010482 216 AELA----LQAGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 290 (509)
Q Consensus 216 ~~~l----~~aGlP~gvv~~v~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~d 290 (509)
++++ .++|+|+|++|+|+|.+. ++++.|..||+|+.|+||||+.+|+.|++.+ ++|+++|||||||+||++|
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~d 258 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDR 258 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCC
Confidence 9996 799999999999998655 5788888999999999999999999998876 7999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhcccc---CCCCCCCcccCcccCHHHHHHHHHHH
Q 010482 291 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV---GDGFGEGVVQGPLINKAALEKVETFV 367 (509)
Q Consensus 291 aDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~---G~p~~~~~~~Gp~i~~~~~~~~~~~i 367 (509)
||++.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++ |||.+ .+++
T Consensus 259 ADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~~-----------------~~~i 320 (444)
T 4ghk_A 259 ASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADA-----------------RAVL 320 (444)
T ss_dssp CCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHHH-----------------HHHH
T ss_pred CCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHHH-----------------HHHH
Confidence 9999999999999999999 9999999999999999999999999999988 76532 3455
Q ss_pred HHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q 010482 368 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 447 (509)
Q Consensus 368 ~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~ 447 (509)
+++. . | ++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 321 ~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 377 (444)
T 4ghk_A 321 EAAG-V--------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHD 377 (444)
T ss_dssp HHTT-C--------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHH
T ss_pred Hhcc-c--------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHH
Confidence 5432 1 1 11 3567899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCCCCCCCccCCCCCCCC----CCChHHHHHhhheeeEEEEec
Q 010482 448 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 448 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~l~~~~~~k~~~~~~ 505 (509)
+++++++++++|+|+||++....+.+||||.|+||+| +++|.+|+++||+.|+|+++.
T Consensus 378 ~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 378 RAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp HHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred HHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 9999999999999999998777788999999999998 689999999999999998864
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.6e-77 Score=628.76 Aligned_cols=410 Identities=19% Similarity=0.238 Sum_probs=345.6
Q ss_pred EcCCCHHHHHHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhh-HHHHHHHHH-HHH
Q 010482 65 VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFI-EFY 142 (509)
Q Consensus 65 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l-~~~ 142 (509)
++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++. ++..+.+.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999999999999999999999999999999985 777777766 343
Q ss_pred HHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCCChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHH--
Q 010482 143 AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL-- 220 (509)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~-- 220 (509)
+. .+..+.. + ..++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.
T Consensus 81 ~~--~~~~g~~-~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KD--EQTCGIL-E-EDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TT--CCCSEEC---------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hh--ccccccc-c-CCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 32 1122211 1 1233456889999999999999999999999999999999999999999999999998887765
Q ss_pred --HcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHH
Q 010482 221 --QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVN 298 (509)
Q Consensus 221 --~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~ 298 (509)
++|+|+|++|+|+|++.++++.|++||+|++|+||||+.+++ .++.++||+++|+|||+|+||++|||++.|++
T Consensus 157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~ 232 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYSSGKPAIGVGAGNVPVVIDETADIKRAVA 232 (452)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHTSSSCEEECC--CEEEEECTTSCHHHHHH
T ss_pred HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHhcCCCEEecCCCCCeEEEeCCCCHHHHHH
Confidence 799999999999998889999999999999999999998654 45678899999999999999999999999999
Q ss_pred HHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCEEE
Q 010482 299 GALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL 378 (509)
Q Consensus 299 ~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~~~ 378 (509)
.+++|+|+|+||.|++++|||||+++||+|+++|+++ +||++++++++++.++++++...|+++
T Consensus 233 ~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v- 296 (452)
T 3my7_A 233 SVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI- 296 (452)
T ss_dssp HHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-
T ss_pred HHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-
Confidence 9999999999999999999999999999999999885 389999999999999998766667776
Q ss_pred eCCcccC---CCCceeecEE-------EecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCC----CCcEEEEEcC
Q 010482 379 LGGRRHS---LGMTFYEPTV-------LSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN----AGLAAYIFTN 444 (509)
Q Consensus 379 ~gg~~~~---~~g~~~~Ptv-------l~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~----~gl~asv~t~ 444 (509)
+||.... ..|+|++||+ +.++++++++.+ |+||||++|++|+|+||||+++|++. |||+++|||+
T Consensus 297 ~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~ 375 (452)
T 3my7_A 297 VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTN 375 (452)
T ss_dssp TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESC
T ss_pred ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcC
Confidence 4765421 2479999997 678999999876 89999999999999999999999985 9999999999
Q ss_pred CHHHHHH---HHhhccceEEEECCCCCCCCCCCccCCCC----------------CCCCCCChHHHHHhhheeeEEEEec
Q 010482 445 NLQRTWR---VSEALEYGLVGVNEGLISTEVAPFGGVKQ----------------SGLGREGSKYGMDEFLEIKYVCLGD 505 (509)
Q Consensus 445 d~~~~~~---~~~~l~~G~v~iN~~~~~~~~~pfGG~k~----------------SG~G~~~g~~~l~~~~~~k~~~~~~ 505 (509)
|.+++++ +++++++|+|+||+++. |||.+. -|.+...+.-+.+++.+.|+|....
T Consensus 376 d~~~a~~i~~~a~~l~~G~V~VN~~~~------~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~ 449 (452)
T 3my7_A 376 QDVNADRIRYFGDKMKTARILINIPTT------HGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRA 449 (452)
T ss_dssp TTTCHHHHHHHHHHCCCSEEEESCCCC----------------------------------CCCCCGGGGEEEEEEECCC
T ss_pred CHHHHHHHHHHHHhCCEEEEEECCCCC------CcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEeec
Confidence 9888777 99999999999998653 443332 2222334456788888988886543
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.81 E-value=0.024 Score=57.07 Aligned_cols=327 Identities=16% Similarity=0.161 Sum_probs=176.8
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC-C------HHHH---------------hhHHHHHHHHHHHHH
Q 010482 86 SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGK-P------LKEA---------------VGEVDYGAKFIEFYA 143 (509)
Q Consensus 86 ~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk-~------~~~a---------------~~ev~~~~~~l~~~~ 143 (509)
.|+..+..+-.+....+.+.++++.|+-....++...+ . +.-. +..++.+.+.++.|.
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l~~~~~~ai~~A~~~I~~fh 105 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQALPAEQAKALREAAERIRAYA 105 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 35555555556666666666776666544444443221 0 1011 123344444455444
Q ss_pred HHHHhhhccccCCCCCCceeEEEeecceEEEEEcCC---ChhHHHHHHhhhhHhhCCCE--EEecCCCCCHHHHHHHHHH
Q 010482 144 EEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCT--VVVKPSEFTPLTALAAAEL 218 (509)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~--vVlkps~~~p~~~~~l~~~ 218 (509)
..... ........+|.....++.|+--|++..|. .||-..++ ..+||-.+|.. |+.-|++... ..-.+.-+
T Consensus 106 ~~Q~~--~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM-~aiPAkVAGV~~Iv~~tPp~~G~-i~p~iL~A 181 (423)
T 4gic_A 106 ERQKL--DSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSVLM-NAVPAKVAGVPELIMAVPAPRGE-LNALVLAA 181 (423)
T ss_dssp HHHCC--CCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHHHH-HHHHHHHHTCSEEEEECCCGGGC-CCHHHHHH
T ss_pred Hhccc--CCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHHHH-hhccHHHhCCCeEEEecCCCCCC-ccHHHHHH
Confidence 32211 11111224566777899999999999995 47654444 57899999986 3445543211 11122233
Q ss_pred HHHcCCCCccEEeecCCchhhhhhhhc----CCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecC-CCCceEE--cCCC
Q 010482 219 ALQAGIPPGVVNVVMGNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIV--FDDA 291 (509)
Q Consensus 219 l~~aGlP~gvv~~v~g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelg-G~~~~iV--~~da 291 (509)
.+.+|+-+ +..-.|.+.-.+|.- -|.||+|+=.|..=+..+=.... ..+-..+- |.+=++| ++.+
T Consensus 182 A~l~Gv~e----Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~----g~VgIDm~AGPSEilViAD~~a 253 (423)
T 4gic_A 182 AYISGVDR----VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF----GQVGIDMVAGPSEILVISDGRT 253 (423)
T ss_dssp HHHHTCCE----EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB----TTBEECCCCCCCEEEEEECSCS
T ss_pred HHhcCCcE----EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc----CCcCcccccccceEEEEeCCCC
Confidence 45667653 333225554445543 67899999888876544322222 22444443 5555444 4458
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehh--hHHHHHHHHHHHHhccccCCCCCCCcccCcccCHHHHHHHHHHHHH
Q 010482 292 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEG--IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 369 (509)
Q Consensus 292 Dl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~--v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~ 369 (509)
|.+.++..++.-+=... ..+.++|..+ ..++..+.+.+.++.+. .+ +. +..
T Consensus 254 ~p~~vAaDLlsQAEHd~-----~a~~iLvT~s~~la~~V~~~i~~~l~~l~---------------r~---~i----~~~ 306 (423)
T 4gic_A 254 DPDWIAMDLFSQAEHDE-----DAQAILISPDAAHLEAVQASIERLLPGME---------------RA---EV----IRT 306 (423)
T ss_dssp CHHHHHHHHHHHHTTCT-----TCEEEEEESCHHHHHHHHHHHHHHGGGCT---------------TH---HH----HHH
T ss_pred CHHHHHHHHHHhhccCC-----CCeEEEEeCcHHHHHHHHHHHHHHHhhCc---------------cH---HH----HHH
Confidence 99998888776654432 2345666554 33444444444443331 11 11 111
Q ss_pred HHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHH
Q 010482 370 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 449 (509)
Q Consensus 370 a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~gl~asv~t~d~~~~ 449 (509)
+.. -+| .++.++|.+|+++++|..-- =..-|.++|+.
T Consensus 307 sl~-------------------------------------~~g---~ii~v~~~~ea~~~~N~~AP-EHLel~~~~~~-- 343 (423)
T 4gic_A 307 SLE-------------------------------------RRG---GMILVDDLEQAAAVANRIAP-EHLELSVESPE-- 343 (423)
T ss_dssp HHH-------------------------------------HHC---EEEECSSHHHHHHHHHHHCC-SEEEEESSCHH--
T ss_pred HHh-------------------------------------cCc---eEEEEeehHHHHHHHHhhCh-HHhhhhhCCHH--
Confidence 111 011 35567999999999998533 26678889875
Q ss_pred HHHHhhcc-ceEEEECCCCCC---------CCCCCccCCCCCCCCCCChHHHHHhhheeeE
Q 010482 450 WRVSEALE-YGLVGVNEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 500 (509)
Q Consensus 450 ~~~~~~l~-~G~v~iN~~~~~---------~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~ 500 (509)
.+..+++ +|.|++..++.. ++.+|-+ |+.|..+.-+++.|++.-+
T Consensus 344 -~~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~-----G~Ar~~sgLsv~~F~K~~s 398 (423)
T 4gic_A 344 -VLVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPTS-----GTARFSSPLGVYDFQKRSS 398 (423)
T ss_dssp -HHGGGCCCCSEEEEC----------------CCCCT-----TGGGTCCCCCGGGGEEEEE
T ss_pred -HHHhhCcEeceeecCCCCchhhhhcCcCCCccCCCC-----CcccccCCCCHHHeeeeee
Confidence 4777777 999999865431 2345544 4556655567888877543
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=97.34 E-value=0.14 Score=51.57 Aligned_cols=282 Identities=19% Similarity=0.228 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCCceeEEEeecceEEEEEcCC---ChhHHHHHHhhhhHhhCCCEEE--ecCC
Q 010482 131 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCTVV--VKPS 205 (509)
Q Consensus 131 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~vV--lkps 205 (509)
.++.+.+.++.|...... ........+|...-.++.|+--|++..|. -||-..+ ....||-.+|..=| +-|+
T Consensus 87 ai~~A~~nI~~fH~~Q~~--~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvL-M~aiPAkVAGV~~Iv~~tPp 163 (434)
T 1kae_A 87 AMAVAVKNIETFHTAQKL--PPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVL-MLATPASIAGCKKVVLCSPP 163 (434)
T ss_dssp HHHHHHHHHHHHHHTTCC--CCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCTHHHH-HHHHHHHHHTCSEEEEEECS
T ss_pred HHHHHHHHHHHHHHHhcC--CCceEEecCCcEEEEEEeehheEEEEecCCCCCchhHHH-HhhccHhhcCCCeEEEECCC
Confidence 445556666655432211 11011122355666789999999999996 5665444 45789999998644 4454
Q ss_pred CCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhh----cCCCeeEEEEeCCHHHHHHHHHHhhcCCCeEEeecC-
Q 010482 206 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG- 280 (509)
Q Consensus 206 ~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~~~~~~~~~~lelg- 280 (509)
...|.+ .-+.+.+|+.+ +.-+ | |.+.-.+|. .-|.||+|+=.|..=+..+=..... ....+-..+-
T Consensus 164 ~i~p~i----L~AA~l~Gv~e--Iy~v-G-GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~-~~G~VgIDm~A 234 (434)
T 1kae_A 164 PIADEI----LYAAQLCGVQD--VFNV-G-GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ-RLDGAAIDMPA 234 (434)
T ss_dssp SCCHHH----HHHHHHTTCCE--EEEC-C-HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHH-CTTSCEESCCC
T ss_pred CCCHHH----HHHHHHcCCCE--Eeec-c-cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHh-hcCccccCCCC
Confidence 333322 23345667653 2222 3 444444443 3588999998887654333222111 1233444443
Q ss_pred CCCceEE--cCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehh--hHHHHHHHHHHHHhccccCCCCCCCcccCcccC
Q 010482 281 GNAPCIV--FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG--IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLIN 356 (509)
Q Consensus 281 G~~~~iV--~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~--v~~~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~ 356 (509)
|.+=++| +++||.+..+..++.-+=... ..+.++|..+ ..++..+.+.+.+..+. .
T Consensus 235 GPSEilViAD~tAnp~~vAaDLLsQAEHd~-----~a~aiLvT~s~~la~~V~~ev~~ql~~lp---------------r 294 (434)
T 1kae_A 235 GPSEVLVIADSGATPDFVASDLLSQAEHGP-----DSQVILLTPAADMARRVAEAVERQLAELP---------------R 294 (434)
T ss_dssp CCCEEEEEECTTSCHHHHHHHHHHHHTTCT-----TCEEEEEESCHHHHHHHHHHHHHHHTTCT---------------T
T ss_pred CCceEEEEeCCCCCHHHHHHHHHHHhccCC-----CCcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h
Confidence 5555544 456899998888776654432 2345666544 33444444444433331 1
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcCCCC
Q 010482 357 KAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 436 (509)
Q Consensus 357 ~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~~~g 436 (509)
. +.++.+. ..- .|+.++|.+||++++|..-.
T Consensus 295 ~-------~ia~~sl----------------------------------------~~~-~ii~v~~l~ea~~~~N~~AP- 325 (434)
T 1kae_A 295 A-------ETARQAL----------------------------------------NAS-RLIVTKDLAQCVEISNQYGP- 325 (434)
T ss_dssp H-------HHHHHHH----------------------------------------TTC-EEEECSSHHHHHHHHHHHCC-
T ss_pred H-------HHHHHHH----------------------------------------HcC-eEEEECCHHHHHHHHHHhhh-
Confidence 0 1112111 122 56678999999999998543
Q ss_pred cEEEEEcCCHHHHHHHHhhcc-ceEEEECCCCC---------CCCCCCccCCCCCCCCCCChHHHHHhhheeeEE
Q 010482 437 LAAYIFTNNLQRTWRVSEALE-YGLVGVNEGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 501 (509)
Q Consensus 437 l~asv~t~d~~~~~~~~~~l~-~G~v~iN~~~~---------~~~~~pfGG~k~SG~G~~~g~~~l~~~~~~k~~ 501 (509)
=..-|.++|+. .+..+++ +|.|++..++. .++.+|-+| +.|..+.-+++.|++.-++
T Consensus 326 EHLel~~~dp~---~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~G-----~AR~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 326 EHLIIQTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTV 392 (434)
T ss_dssp SEEEEESTTHH---HHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCSCGGGGEEEEEE
T ss_pred HhhhhhhcCHH---HHHhhcCcccchhcCCCCchhhcccccCCCcccCCCC-----ceeccCCCcHHhccceeeE
Confidence 26778899975 4677777 99999997654 234566544 5566666678888875443
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=67.06 E-value=17 Score=28.63 Aligned_cols=61 Identities=18% Similarity=0.159 Sum_probs=40.7
Q ss_pred cCHHHHHHHHHHHHHHH-HCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcC
Q 010482 355 INKAALEKVETFVEDAV-SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT 433 (509)
Q Consensus 355 i~~~~~~~~~~~i~~a~-~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~ 433 (509)
.+++.+++..+.....+ +.|++++..|.. |.++.+.. .|-+.|+.|+|.+.|.++.|+-
T Consensus 15 ~d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~---------~~~~eG~~-----------~~~~viieFpS~~aa~~~~~s~ 74 (99)
T 2fiu_A 15 RDSERYKDYVSTAKPAFERFGANFLARGGS---------VTELEGTA-----------RARNVVIEFPSVQHAIDCYNSP 74 (99)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEEEESCC---------EEEEESCC-----------CSEEEEEEESSHHHHHHHHHSH
T ss_pred CCHHHHHHHHHHHHHHHHHcCcEEEEECCC---------ceEEecCC-----------cCeEEEEECCCHHHHHHHHcCH
Confidence 35556666655555554 468888876654 34444421 1367899999999999999876
Q ss_pred CC
Q 010482 434 NA 435 (509)
Q Consensus 434 ~~ 435 (509)
+|
T Consensus 75 ~Y 76 (99)
T 2fiu_A 75 EY 76 (99)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 56
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=54.51 E-value=39 Score=27.71 Aligned_cols=73 Identities=16% Similarity=0.178 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHCCCEEEeCCcccC-CCCcee-----ecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHh
Q 010482 358 AALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFY-----EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 431 (509)
Q Consensus 358 ~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~~-----~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n 431 (509)
...+...++.++..+.|. ++.|+.... ..+..+ .|+|.++.-.+ ..|..|= +.|+.++|.|||++++.
T Consensus 30 ~~~~~~~~~~~~l~~~G~-lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lgG-~~iie~~s~deA~e~A~ 103 (124)
T 1s7i_A 30 AIVDECMTYSDQLGKAGH-YIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLGG-FYLIEARDLNQALQIAA 103 (124)
T ss_dssp HHHHHHHHHHHHHHHHTC-EEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEEE-EEEEEESSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCE-EEecCcCCCCcceEEEEecCCceeEecCCCcC----Cccccee-EEEEEeCCHHHHHHHHH
Confidence 445666677777666674 443332211 112222 24555443333 3466553 67889999999999998
Q ss_pred cCCCC
Q 010482 432 DTNAG 436 (509)
Q Consensus 432 ~~~~g 436 (509)
..++.
T Consensus 104 ~~P~~ 108 (124)
T 1s7i_A 104 KIPPG 108 (124)
T ss_dssp TCGGG
T ss_pred hCCcc
Confidence 87764
No 57
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=53.28 E-value=5.4 Score=33.58 Aligned_cols=85 Identities=9% Similarity=0.023 Sum_probs=54.5
Q ss_pred HHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHH-cCCCCccEEeec-CCchhhhhhhhcCCCeeEEEEeCC-----
Q 010482 185 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQ-AGIPPGVVNVVM-GNAPDIGDALLTSPQVRKITFTGS----- 257 (509)
Q Consensus 185 ~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~-aGlP~gvv~~v~-g~~~~~~~~L~~~~~v~~V~ftGs----- 257 (509)
..+.+-...|+.|-.++- |.-|+. .|.+ .|+|-..++=++ +..+++++.+. +-+|+.|+||-+
T Consensus 19 v~~a~~~~~ll~Gf~l~A-----T~gTa~----~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~-~geIdlVInt~~pl~~~ 88 (134)
T 2xw6_A 19 VAFCQRHREVLARFPLVA-----TGTTGR----RIEEATGLTVEKLLSGPLGGDQQMGARVA-EGRILAVIFFRDPLTAQ 88 (134)
T ss_dssp HHHHHHTHHHHTTSCEEE-----CHHHHH----HHHHHHCCCCEECSCGGGTHHHHHHHHHH-TTCEEEEEEECCTTTCC
T ss_pred HHHHHHHHHHhCCCEEEE-----ccHHHH----HHHHhhCceEEEEEecCCCCcchHHHHHH-CCCccEEEEccCcccCC
Confidence 333344455556666553 444554 4455 799987777666 53456666555 567999999987
Q ss_pred --HHHHHHHHHHhhcCCCeEEeec
Q 010482 258 --TAVGKKLMAGAAGTVKKVSLEL 279 (509)
Q Consensus 258 --~~~g~~i~~~~~~~~~~~~lel 279 (509)
...+..|.+.+-....|+..-+
T Consensus 89 ~h~~D~~~IrR~A~~~~IP~~T~l 112 (134)
T 2xw6_A 89 PHEPDVQALLRVCDVHGVPLATNP 112 (134)
T ss_dssp TTSCCSHHHHHHHHHHTCCEECSH
T ss_pred CccchHHHHHHHHHHcCCCeEcCH
Confidence 3356778888877767766543
No 58
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=53.08 E-value=21 Score=30.60 Aligned_cols=114 Identities=11% Similarity=-0.009 Sum_probs=75.5
Q ss_pred eEEEEEcCC-ChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHH-cCCCCccEEeecC-CchhhhhhhhcCC
Q 010482 171 GVAGAITPW-NFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQ-AGIPPGVVNVVMG-NAPDIGDALLTSP 247 (509)
Q Consensus 171 GVv~~i~p~-n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~-aGlP~gvv~~v~g-~~~~~~~~L~~~~ 247 (509)
|.|+++..- .=+-...+.+-...|+.|-.++- |.-|+ +.|.+ .|+|-..++=++. ..+++++.+. +-
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~-~g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA-----TGTTG----NLISRATGMNVNAMLSGPMGGDQQVGALIS-EG 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEE-----ETTHH----HHHHHHHCCCCEEECCGGGTHHHHHHHHHH-TT
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEE-----ccHHH----HHHHHHhCceeEEEEecCCCCCchHHHHHH-CC
Confidence 655555443 33555555556667778887764 23344 44555 8999877765543 2345666554 56
Q ss_pred CeeEEEEeCC-------HHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccC
Q 010482 248 QVRKITFTGS-------TAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 309 (509)
Q Consensus 248 ~v~~V~ftGs-------~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~G 309 (509)
+|+.|+||-+ ...+..|.+.|-....|+..-+ ..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 7999999977 5678899999988877777554 457777777777654
No 59
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=48.46 E-value=16 Score=32.17 Aligned_cols=120 Identities=11% Similarity=-0.052 Sum_probs=79.2
Q ss_pred EEeecc-eEEEEEcCC-ChhHHHHHHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHH-cCCCCccEEeecC-Cchhhh
Q 010482 165 VLKQPV-GVAGAITPW-NFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQ-AGIPPGVVNVVMG-NAPDIG 240 (509)
Q Consensus 165 ~~~~P~-GVv~~i~p~-n~P~~~~~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~-aGlP~gvv~~v~g-~~~~~~ 240 (509)
...-|. |.|+++..- .=+-...+.+-...|+.|-.++- |.-|+. .|.+ .|+|-..++=++. ..++++
T Consensus 21 ~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa~----~L~e~~Gl~v~~v~k~~eGG~pqI~ 91 (178)
T 1vmd_A 21 KIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTGA----LLQEKLGLKVHRLKSGPLGGDQQIG 91 (178)
T ss_dssp EEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHHH----HHHHHHCCCCEECSCGGGTHHHHHH
T ss_pred eeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHHH----HHHHHhCceeEEEeecCCCCCchHH
Confidence 344443 656655554 34555555566677778988774 455554 4455 7999776654442 234566
Q ss_pred hhhhcCCCeeEEEEeCC-------HHHHHHHHHHhhcCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccC
Q 010482 241 DALLTSPQVRKITFTGS-------TAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 309 (509)
Q Consensus 241 ~~L~~~~~v~~V~ftGs-------~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~G 309 (509)
+.+. +-.|++|+||-+ ...+..|.+.|-....|+..-+ ..+++++.+.+++..
T Consensus 92 d~I~-~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 92 AMIA-EGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHHH-TTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred HHHH-CCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 5554 567999999977 3467889999988877777554 467788888877754
No 60
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=46.96 E-value=45 Score=25.80 Aligned_cols=61 Identities=16% Similarity=0.178 Sum_probs=41.2
Q ss_pred cCHHHHHHHHHHHHHHHH-CCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhcC
Q 010482 355 INKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT 433 (509)
Q Consensus 355 i~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~~ 433 (509)
.+++.+++..+.....++ .|++++..| . +.++++.. . ..-+.|+.|+|.+.|.++.|+-
T Consensus 14 ~d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~---------~~~lEG~~---------~-~~~~viieFps~~aa~a~y~Sp 73 (94)
T 3lo3_A 14 KDAEKLQQYGARVASTLAKYSGEVLVKG-S---------VEQLHGKF---------E-HKAQVILEFPSREDAYNWYHSE 73 (94)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCEEEEEE-E---------CEEEESCC---------C-CSEEEEEEESSHHHHHHHHHSH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEc-c---------cccccCCC---------C-CCeEEEEECCCHHHHHHHHCCH
Confidence 455666666666665554 588888766 3 23454421 0 2568999999999999999986
Q ss_pred CC
Q 010482 434 NA 435 (509)
Q Consensus 434 ~~ 435 (509)
.|
T Consensus 74 eY 75 (94)
T 3lo3_A 74 EY 75 (94)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 61
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=46.02 E-value=19 Score=30.37 Aligned_cols=63 Identities=6% Similarity=-0.013 Sum_probs=46.1
Q ss_pred HHHHHHcCCCCccEEeecCC-c----hhhhhhhhcCCCeeEEEEeCCH-----HHHHHHHHHhhcCCCeEEeec
Q 010482 216 AELALQAGIPPGVVNVVMGN-A----PDIGDALLTSPQVRKITFTGST-----AVGKKLMAGAAGTVKKVSLEL 279 (509)
Q Consensus 216 ~~~l~~aGlP~gvv~~v~g~-~----~~~~~~L~~~~~v~~V~ftGs~-----~~g~~i~~~~~~~~~~~~lel 279 (509)
++.|.+.|+|-..++-++.. . +++.+.+. +-+|+.|++|-+. ..+..|.+.+-....|++..+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~-~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIR-DGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHHH-TTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHHH-CCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 35567899998888877642 2 45666555 5579999998765 378888888888888887654
No 62
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=44.01 E-value=48 Score=27.98 Aligned_cols=65 Identities=12% Similarity=0.030 Sum_probs=43.7
Q ss_pred ccCHHHHHHHHHHHHHHH-HCCCEEEeCCcccCCCCceeecEEEecCCCCCcccccccccceEEEEEeCCHHHHHHHHhc
Q 010482 354 LINKAALEKVETFVEDAV-SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 432 (509)
Q Consensus 354 ~i~~~~~~~~~~~i~~a~-~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv~~v~~~~~~~eai~l~n~ 432 (509)
+.+++.+++..+.....+ +.|++++..|... .++.+... |. ..-+.|+.|+|.+.|.++.|+
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~~---------~~lEG~~~-------e~-~~~~viieFPS~~aa~a~y~S 107 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQFE---------LMLIGPQD-------EH-WDHVFIAEYPSVAAFVEMIRD 107 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---------EEEESCTT-------CC-CSEEEEEEESCHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCCc---------eeEECCCC-------CC-CCeEEEEECCCHHHHHHHHcC
Confidence 456677777766666554 4688888776543 34444221 11 146799999999999999888
Q ss_pred CCC
Q 010482 433 TNA 435 (509)
Q Consensus 433 ~~~ 435 (509)
-.|
T Consensus 108 peY 110 (143)
T 3hhl_A 108 PVY 110 (143)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 63
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=37.44 E-value=2e+02 Score=24.85 Aligned_cols=42 Identities=21% Similarity=0.225 Sum_probs=33.2
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCC
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN 235 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~ 235 (509)
+...-..||-+|+|..+-. +..++.++...++| +++..|.|+
T Consensus 105 v~sv~~~~nlvVikT~PG~---A~~vA~~iD~~~~~-eIlGTIAGD 146 (170)
T 3lap_A 105 LVSTDDSGNLAVLRTPPGA---AHYLASAIDRAALP-QVVGTIAGD 146 (170)
T ss_dssp CCEEEEETTEEEEECSTTC---HHHHHHHHHHHTCT-TEEEEEECS
T ss_pred eeEEeecCCEEEEEeCCCc---HHHHHHHHHhCCCC-CeEEEEecC
Confidence 4445568999999988665 67788888888877 689988885
No 64
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=34.58 E-value=20 Score=32.90 Aligned_cols=70 Identities=13% Similarity=0.137 Sum_probs=48.6
Q ss_pred HHhhhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHH
Q 010482 187 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 264 (509)
Q Consensus 187 ~~~l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 264 (509)
+..++..+.+||-||++.+.. .....+..+|... ||.|++++++. ..+- ...-..+.+.++.+...-..+
T Consensus 21 F~~l~~~vl~GnQiIVrg~~~--~~~~s~~~~L~~l-LP~~c~~l~~~-s~~Y----~~~~~cnilgls~~v~iP~~v 90 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRDV--DLVQSAFEVLRTM-LPVGCVRIIPY-SSQY----EEAYRCNFLGLSPHVQIPPHV 90 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSCH--HHHHHHHHHHGGG-SCGGGCCEEEE-ESSC----CCTTTCSEEEECTTCCCCHHH
T ss_pred HHHHHHHHhcCCEEEEEcCCH--HHHHHHHHHHHHh-CCHHHHhcccc-chhh----cchhheeeecCCCCcccCccc
Confidence 456778889999999998653 3455567777777 99999999965 2322 223345677777776655544
No 65
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=31.32 E-value=70 Score=23.83 Aligned_cols=37 Identities=24% Similarity=0.302 Sum_probs=30.1
Q ss_pred hCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCC
Q 010482 195 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN 235 (509)
Q Consensus 195 aaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~ 235 (509)
.++|-+|+|..|-. +..++.++....+|+ ++..|.|+
T Consensus 19 ~~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 19 DSGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp EETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 37999999987655 677888888887776 88888875
No 66
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=31.12 E-value=66 Score=23.44 Aligned_cols=36 Identities=19% Similarity=0.182 Sum_probs=29.5
Q ss_pred CCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCC
Q 010482 196 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN 235 (509)
Q Consensus 196 aGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~ 235 (509)
.+|-+|+|..|-. +..++.++.+.++|+ ++..+.|+
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGD 47 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 47 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeC
Confidence 6999999987655 677888888887776 88888875
No 67
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=30.88 E-value=36 Score=28.27 Aligned_cols=46 Identities=22% Similarity=0.220 Sum_probs=32.1
Q ss_pred ccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcCC
Q 010482 227 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 272 (509)
Q Consensus 227 gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 272 (509)
|.+.+++|+..+.-...+..+++..|.+||+......+.+.+.+..
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ 98 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERG 98 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHT
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHCC
Confidence 5688887866554434443357999999999887777777765443
No 68
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=30.39 E-value=90 Score=30.06 Aligned_cols=103 Identities=15% Similarity=0.133 Sum_probs=59.7
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeec-C-Cch--hhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh----c
Q 010482 199 TVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM-G-NAP--DIGDALLTSPQVRKITFTGSTAVGKKLMAGAA----G 270 (509)
Q Consensus 199 ~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~-g-~~~--~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~----~ 270 (509)
.+|++|..........+.+.|.+.|.. +.+.. . .+. ++...+.. ...+.|+..|+..+-..+..... .
T Consensus 33 ~vi~Np~sg~~~~~~~i~~~l~~~g~~---~~~~~t~~~~~~~~~~~~~~~-~~~d~vvv~GGDGTl~~v~~~l~~~~~~ 108 (332)
T 2bon_A 33 LLILNGKSTDNLPLREAIMLLREEGMT---IHVRVTWEKGDAARYVEEARK-FGVATVIAGGGDGTINEVSTALIQCEGD 108 (332)
T ss_dssp EEEECSSSTTCHHHHHHHHHHHTTTCC---EEEEECCSTTHHHHHHHHHHH-HTCSEEEEEESHHHHHHHHHHHHHCCSS
T ss_pred EEEECCCCCCCchHHHHHHHHHHcCCc---EEEEEecCcchHHHHHHHHHh-cCCCEEEEEccchHHHHHHHHHhhcccC
Confidence 355666544333445667778888875 33332 1 111 22222222 23578999999999999888876 4
Q ss_pred CCCeE-EeecC-CCCceEEcC-CCCHHHHHHHHHHHHh
Q 010482 271 TVKKV-SLELG-GNAPCIVFD-DADLNVAVNGALAAKF 305 (509)
Q Consensus 271 ~~~~~-~lelg-G~~~~iV~~-daDl~~a~~~i~~~~~ 305 (509)
...|+ ++-+| ||+-+--.. ..|++.+++.++.+.+
T Consensus 109 ~~~plgiiP~Gt~N~fa~~l~i~~~~~~al~~i~~g~~ 146 (332)
T 2bon_A 109 DIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDA 146 (332)
T ss_dssp CCCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSEE
T ss_pred CCCeEEEecCcCHHHHHHhcCCCCCHHHHHHHHHcCCe
Confidence 44454 35566 343332222 4578999998887654
No 69
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=29.89 E-value=1.2e+02 Score=21.38 Aligned_cols=36 Identities=11% Similarity=0.136 Sum_probs=26.1
Q ss_pred HHHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 79 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 79 ~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
.++.....|..+|.++|..........-.....++.
T Consensus 29 i~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 29 KLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556789999999999988777665555555543
No 70
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=27.97 E-value=59 Score=24.25 Aligned_cols=37 Identities=24% Similarity=0.302 Sum_probs=30.8
Q ss_pred CCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCC
Q 010482 196 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN 235 (509)
Q Consensus 196 aGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~ 235 (509)
.+|-+|+|..|-. +..++.++.+.+.+++++..|.|+
T Consensus 14 ~~n~vVikT~PG~---A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 14 NDAVVVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp CSSCEEEEESTTT---HHHHHHHHTTTTTTTTEEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhcCCCCCeEEEEecC
Confidence 6899999987555 677888888787899999999885
No 71
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=26.46 E-value=68 Score=24.16 Aligned_cols=36 Identities=17% Similarity=0.163 Sum_probs=29.5
Q ss_pred CCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCC
Q 010482 196 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN 235 (509)
Q Consensus 196 aGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~ 235 (509)
.+|-+|+|..|-. +..++.++...++|+ ++..|.|+
T Consensus 24 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 59 (83)
T 2p5m_A 24 ASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGD 59 (83)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 7999999987655 677888888887776 88888875
No 72
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=25.96 E-value=3.6e+02 Score=26.84 Aligned_cols=137 Identities=15% Similarity=0.114 Sum_probs=77.8
Q ss_pred hhHhhC-CCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhh
Q 010482 191 GPALAC-GCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 269 (509)
Q Consensus 191 ~~ALaa-GN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 269 (509)
+++|.. .+.-|+--....+..+..+++.+.+.|+|.. .+..+ +.+--+.|++++++|.|...-....-..+...+.
T Consensus 36 ~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~--~~~~~-~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~al 112 (444)
T 2ixa_A 36 VENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPA--KVFGN-GNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAM 112 (444)
T ss_dssp HHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCC--EEECS-STTTHHHHTTCTTCCEEEECCCGGGHHHHHHHHH
T ss_pred HHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCC--ceecc-CCCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHH
Confidence 344443 4444544555666667777776667787632 23332 1122356777889999998888877777777777
Q ss_pred cCCCeEEeecCCCCceEEcCCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHHhccccCCCC
Q 010482 270 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 345 (509)
Q Consensus 270 ~~~~~~~lelgG~~~~iV~~daDl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~l~~~~~~~~~G~p~ 345 (509)
+.+|.|.+|-. + ..+++.+.+ ++..+ ...|..|. +.+...|+.....+++.+++=.+|++.
T Consensus 113 ~aGkhV~~EKP----~----a~~~~ea~~-l~~~a-~~~g~~~~-----v~~~~r~~p~~~~~~~~i~~G~iG~i~ 173 (444)
T 2ixa_A 113 KAGKIVGMEVS----G----AITLEECWD-YVKVS-EQTGVPLM-----ALENVCYRRDVMAILNMVRKGMFGELV 173 (444)
T ss_dssp HTTCEEEECCC----C----CSSHHHHHH-HHHHH-HHHCCCEE-----ECCGGGGCHHHHHHHHHHHTTTTCSEE
T ss_pred HCCCeEEEeCC----C----cCCHHHHHH-HHHHH-HHhCCeEE-----EEeccccCHHHHHHHHHHHcCCCCCeE
Confidence 77888888832 2 124554433 33322 22343331 223344555566677777654556543
No 73
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=25.32 E-value=53 Score=28.93 Aligned_cols=43 Identities=23% Similarity=0.198 Sum_probs=34.7
Q ss_pred hhhHhhCCCEEEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCC
Q 010482 190 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN 235 (509)
Q Consensus 190 l~~ALaaGN~vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~ 235 (509)
+...-.+||-+|+|..|-. |..++.++...++|++++..|.|+
T Consensus 110 vvsv~~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 110 VLDVDHNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp EEEEEECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred EEEEeecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 3444457999999988665 677888888888999999999885
No 74
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.33 E-value=1.6e+02 Score=21.93 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=25.7
Q ss_pred HHHhhHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010482 80 AFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 114 (509)
Q Consensus 80 A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 114 (509)
++.....|..++.+++..+.......-+.+..++.
T Consensus 49 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 49 SKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455789999999999888777766666655543
No 75
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=23.18 E-value=2.2e+02 Score=27.27 Aligned_cols=103 Identities=11% Similarity=0.069 Sum_probs=61.3
Q ss_pred EEEecCCCC---CHHHHHHHHHHHHHcCCCCccEEeecCCc----hhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHh--h
Q 010482 199 TVVVKPSEF---TPLTALAAAELALQAGIPPGVVNVVMGNA----PDIGDALLTSPQVRKITFTGSTAVGKKLMAGA--A 269 (509)
Q Consensus 199 ~vVlkps~~---~p~~~~~l~~~l~~aGlP~gvv~~v~g~~----~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~--~ 269 (509)
.+|+.|... .......+.+.|.++|+. +.+..... .++...+.. ...+.|+.-|+..+-..+.... .
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~---~~~~~t~~~~~a~~~~~~~~~-~~~d~vvv~GGDGTv~~v~~~l~~~ 103 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYE---TSAYATEKIGDATLEAERAMH-ENYDVLIAAGGDGTLNEVVNGIAEK 103 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEE---EEEEECCSTTHHHHHHHHHTT-TTCSEEEEEECHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCe---EEEEEecCcchHHHHHHHHhh-cCCCEEEEEcCchHHHHHHHHHHhC
Confidence 356666654 223445677888888764 33332111 122223332 3468899999999999998888 4
Q ss_pred cCCCeE-EeecC-CCCceEEcC-CCCHHHHHHHHHHHHh
Q 010482 270 GTVKKV-SLELG-GNAPCIVFD-DADLNVAVNGALAAKF 305 (509)
Q Consensus 270 ~~~~~~-~lelg-G~~~~iV~~-daDl~~a~~~i~~~~~ 305 (509)
....|+ ++-+| ||.-+-.+. ..|++.+++.++.+.+
T Consensus 104 ~~~~pl~iIP~GT~N~lAr~Lg~~~~~~~al~~i~~g~~ 142 (337)
T 2qv7_A 104 PNRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHS 142 (337)
T ss_dssp SSCCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHHHTCE
T ss_pred CCCCcEEEecCCcHhHHHHHcCCCCCHHHHHHHHHcCCc
Confidence 344443 55666 444333322 4589999998887654
No 76
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=22.60 E-value=96 Score=28.97 Aligned_cols=87 Identities=9% Similarity=-0.040 Sum_probs=54.7
Q ss_pred EEecCCCCCHHHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcCCCeeEEEEeCCHHHHHHHHHHhhcC--CCe-EE
Q 010482 200 VVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT--VKK-VS 276 (509)
Q Consensus 200 vVlkps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~--~~~-~~ 276 (509)
+|.+|.+.+......+.+.|.+.|+.- ...+.+.|+.-|+..+-..+++..... .+| +-
T Consensus 5 ii~n~~~~~~~~~~~l~~~l~~~g~~v------------------~~~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilG 66 (272)
T 2i2c_A 5 ITSKGDEKSDLLRLNMIAGFGEYDMEY------------------DDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIG 66 (272)
T ss_dssp EEECCSHHHHHHHHHHHHHHTTSSCEE------------------CSSSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEE
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCEe------------------CCCCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEE
Confidence 455654434344455666677666531 123568899999999998888887654 566 44
Q ss_pred eecCCCCceEEcCCCCHHHHHHHHHHHH
Q 010482 277 LELGGNAPCIVFDDADLNVAVNGALAAK 304 (509)
Q Consensus 277 lelgG~~~~iV~~daDl~~a~~~i~~~~ 304 (509)
+.+|-.+.+-=....|++.+++.++.+.
T Consensus 67 In~G~lgfl~~~~~~~~~~~l~~l~~g~ 94 (272)
T 2i2c_A 67 IHTGHLGFYADWRPAEADKLVKLLAKGE 94 (272)
T ss_dssp EESSSCCSSCCBCGGGHHHHHHHHHTTC
T ss_pred EeCCCCCcCCcCCHHHHHHHHHHHHcCC
Confidence 5666444222123457888998888764
No 77
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=22.44 E-value=39 Score=29.15 Aligned_cols=50 Identities=24% Similarity=0.318 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHcCCCCccEEeecCCchhhhhhhhcC--CCeeEEEEeCCHHHH
Q 010482 211 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS--PQVRKITFTGSTAVG 261 (509)
Q Consensus 211 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~--~~v~~V~ftGs~~~g 261 (509)
....|.+++.+.|...-...+++.+ .++.++|.+. .+.|.|..||++..+
T Consensus 28 n~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g 79 (164)
T 3pzy_A 28 CGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIA 79 (164)
T ss_dssp HHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 4466788899999876667778776 6666665442 357889999988743
No 78
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=20.42 E-value=98 Score=26.69 Aligned_cols=51 Identities=20% Similarity=0.100 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHcCCCCccEEeecCCchhhhhhhh---cCCCeeEEEEeCCHHH
Q 010482 210 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALL---TSPQVRKITFTGSTAV 260 (509)
Q Consensus 210 ~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~---~~~~v~~V~ftGs~~~ 260 (509)
..+..|++.|.+.|+.---..+++.+-..+.+++. ...+.|.|..||+...
T Consensus 40 ~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~ 93 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGY 93 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSS
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCccc
Confidence 45677889999999876666667654444544443 3456788999998863
Done!