Query 010486
Match_columns 509
No_of_seqs 213 out of 1957
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 07:50:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010486.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010486hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qdm_A Prophytepsin; aspartic 100.0 3.7E-86 1.3E-90 706.1 39.6 474 29-509 1-478 (478)
2 3psg_A Pepsinogen; hydrolase(a 100.0 2.7E-71 9.1E-76 574.7 37.9 367 28-509 1-370 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 1.8E-70 6.1E-75 570.2 35.8 374 26-509 6-383 (383)
4 1tzs_A Cathepsin E; hydrolase, 100.0 2.5E-64 8.6E-69 519.1 35.7 331 72-509 12-342 (351)
5 3cms_A Chymosin B; hydrolase, 100.0 5.7E-64 2E-68 510.7 37.0 321 72-509 3-323 (323)
6 1dpj_A Proteinase A; proteinas 100.0 6.4E-64 2.2E-68 511.6 37.1 326 73-509 3-329 (329)
7 3k1w_A Renin; protease, altern 100.0 3.6E-64 1.2E-68 515.6 35.0 332 71-509 6-340 (341)
8 4aa9_A Chymosin; hydrolase, as 100.0 5.4E-64 1.9E-68 510.0 33.5 319 74-509 2-320 (320)
9 1am5_A Pepsin, acid proteinase 100.0 1.2E-63 4E-68 508.5 34.2 322 74-509 3-324 (324)
10 1htr_B Gastricsin; aspartyl pr 100.0 1.1E-63 3.8E-68 509.8 33.0 325 74-509 4-329 (329)
11 1miq_A Plasmepsin; aspartic pr 100.0 8.2E-63 2.8E-67 511.9 35.3 321 71-509 50-374 (375)
12 3qvc_A Histo-aspartic protease 100.0 2E-62 6.8E-67 518.9 36.3 321 71-509 125-449 (451)
13 2bju_A Plasmepsin II; aspartic 100.0 5.3E-62 1.8E-66 515.2 34.2 322 71-509 126-450 (453)
14 1yg9_A Aspartic protease BLA G 100.0 2.2E-61 7.4E-66 493.1 32.6 318 72-509 6-329 (330)
15 1mpp_A Pepsin; hydrolase(acid 100.0 3.6E-61 1.2E-65 497.3 32.2 326 71-509 6-355 (361)
16 2apr_A Rhizopuspepsin; hydrola 100.0 3.8E-59 1.3E-63 475.6 38.0 311 79-509 11-324 (325)
17 3c9x_A Trichoderma reesei aspa 100.0 7.3E-59 2.5E-63 474.3 35.9 313 79-508 11-329 (329)
18 1oew_A Endothiapepsin; hydrola 100.0 1.2E-58 4.1E-63 472.7 35.2 310 81-508 13-329 (329)
19 3fv3_A SAPP1P-secreted asparti 100.0 1.2E-57 4.1E-62 466.9 36.2 313 73-509 3-329 (339)
20 1ibq_A Aspergillopepsin; aspar 100.0 1.8E-57 6.1E-62 463.2 36.7 309 81-509 12-325 (325)
21 2qzx_A Candidapepsin-5; aspart 100.0 2E-57 6.8E-62 466.0 36.5 314 73-509 3-331 (342)
22 1izd_A Aspartic proteinase; su 100.0 2.2E-57 7.5E-62 462.2 36.2 306 81-509 13-323 (323)
23 1j71_A Candidapepsin, aspartic 100.0 2.1E-57 7.2E-62 464.4 35.7 309 73-509 3-324 (334)
24 3pvk_A Candidapepsin-2; hydrol 100.0 5.7E-57 1.9E-61 462.4 35.9 315 73-509 3-331 (342)
25 1bxo_A Protein (penicillopepsi 100.0 1.7E-57 5.7E-62 463.1 31.6 306 81-509 13-323 (323)
26 1wkr_A Polyporopepsin; hydrola 100.0 2.1E-56 7.4E-61 458.0 35.0 312 73-509 3-333 (340)
27 3lpj_A Beta-secretase 1; alzhe 100.0 1.6E-55 5.5E-60 468.6 29.5 326 76-509 67-420 (455)
28 2ewy_A Beta-secretase 2; BACE2 100.0 1E-54 3.5E-59 452.5 31.9 324 76-509 6-355 (383)
29 3vf3_A Beta-secretase 1; struc 100.0 3.2E-54 1.1E-58 451.6 30.3 323 77-509 22-374 (402)
30 2qp8_A Beta-secretase 1; BACE1 100.0 6.6E-54 2.2E-58 448.3 31.9 324 76-509 14-367 (395)
31 3aup_A SBG7S, BG, basic 7S glo 100.0 5.9E-53 2E-57 442.2 26.9 325 72-509 9-387 (403)
32 3vla_A EDGP; extracellular, in 100.0 3.9E-52 1.3E-56 436.6 26.0 330 71-508 7-398 (413)
33 1t6e_X Xylanase inhibitor; two 100.0 1.5E-49 5E-54 413.5 22.3 324 74-509 4-373 (381)
34 1b5f_A Protein (cardosin A); h 100.0 3.5E-48 1.2E-52 377.8 26.0 238 72-316 2-239 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 8.8E-45 3E-49 354.0 27.4 241 164-509 1-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1.8E-23 6.2E-28 174.2 10.8 93 73-165 3-96 (97)
37 1b5f_B Protein (cardosin A); h 99.8 2.6E-21 8.9E-26 158.1 9.3 87 422-509 1-87 (87)
38 3rfi_A Asp; PSI, saposin, hydr 99.6 4.2E-16 1.4E-20 132.0 1.6 104 315-418 3-108 (108)
39 2qyp_A Proactivator polypeptid 96.9 0.00037 1.3E-08 56.3 2.6 43 378-420 3-45 (91)
40 4ddj_A Saposin-A, protein A; s 96.9 0.00047 1.6E-08 54.7 3.1 42 379-420 2-43 (83)
41 3bqp_A Proactivator polypeptid 96.8 0.00046 1.6E-08 54.1 2.5 40 380-419 2-41 (80)
42 2gtg_A Proactivator polypeptid 96.0 0.0038 1.3E-07 49.3 2.9 41 379-419 3-43 (83)
43 1l9l_A Granulysin; saposin fol 95.5 0.0058 2E-07 47.3 2.4 38 381-419 2-39 (74)
44 1of9_A Pore-forming peptide am 95.5 0.0057 1.9E-07 47.7 2.3 40 380-420 2-41 (77)
45 1n69_A Saposin B; lipid bindin 95.3 0.0088 3E-07 47.0 2.7 41 379-419 2-43 (81)
46 1nkl_A NK-lysin; saposin fold, 94.8 0.0087 3E-07 46.7 1.5 39 381-419 2-40 (78)
47 2i1a_A DNA damage-inducible pr 93.7 0.083 2.8E-06 46.1 5.5 96 76-196 18-115 (148)
48 2js9_A Saposin-like protein fa 92.5 0.028 9.5E-07 46.0 0.5 53 377-431 18-70 (99)
49 2i1a_A DNA damage-inducible pr 92.1 0.33 1.1E-05 42.1 7.1 26 481-506 109-134 (148)
50 2qyp_A Proactivator polypeptid 88.2 0.093 3.2E-06 41.9 -0.0 39 319-357 46-84 (91)
51 3s8i_A Protein DDI1 homolog 1; 87.4 0.45 1.6E-05 41.6 4.0 91 82-196 22-114 (148)
52 2js9_A Saposin-like protein fa 87.1 0.17 5.8E-06 41.3 0.9 36 319-354 63-98 (99)
53 1nkl_A NK-lysin; saposin fold, 86.8 0.12 4E-06 40.1 -0.2 37 319-355 41-77 (78)
54 3bqp_A Proactivator polypeptid 86.3 0.12 4.2E-06 39.9 -0.3 37 319-355 43-79 (80)
55 1of9_A Pore-forming peptide am 85.7 0.13 4.6E-06 39.7 -0.4 36 319-354 42-77 (77)
56 2gtg_A Proactivator polypeptid 85.2 0.16 5.3E-06 39.7 -0.2 37 319-355 45-81 (83)
57 3s8i_A Protein DDI1 homolog 1; 83.4 3.2 0.00011 36.1 7.5 26 481-506 108-133 (148)
58 2hs1_A HIV-1 protease; ultra-h 79.0 2.4 8.3E-05 34.3 4.7 29 86-116 10-38 (99)
59 1n69_A Saposin B; lipid bindin 77.3 0.43 1.5E-05 37.1 -0.3 36 319-355 45-80 (81)
60 1l9l_A Granulysin; saposin fol 76.2 0.56 1.9E-05 35.9 0.1 34 319-352 41-74 (74)
61 4ddj_A Saposin-A, protein A; s 75.9 0.42 1.4E-05 37.2 -0.7 36 320-355 46-82 (83)
62 1fmb_A EIAV protease; hydrolas 75.1 2.6 9E-05 34.4 3.9 27 85-113 9-35 (104)
63 3ec0_A Protease; HIV-2, inhibi 72.5 4.1 0.00014 32.9 4.4 29 86-116 10-38 (99)
64 3liy_A Protease; hydrolase, hy 66.3 4.4 0.00015 33.5 3.4 32 86-117 12-46 (116)
65 1htr_P Progastricsin (Pro segm 64.7 10 0.00034 24.8 4.5 26 28-53 2-27 (43)
66 3vcm_P Prorenin; aspartic prot 62.6 5.7 0.00019 26.7 2.9 26 26-51 6-31 (43)
67 2hah_A Protease, retropepsin; 60.6 7.2 0.00024 32.5 3.7 25 89-115 18-42 (116)
68 1tzs_P Activation peptide from 60.2 5.7 0.0002 24.7 2.4 27 27-53 2-28 (35)
69 3sqf_A Protease; folded monome 55.6 9.7 0.00033 31.5 3.6 29 86-116 11-39 (114)
70 3slz_A GAG-Pro-POL polyprotein 50.7 17 0.00056 31.0 4.4 30 84-115 22-51 (132)
71 3s64_A AC-SLP-1, saposin-like 50.4 3.4 0.00012 32.5 0.1 49 306-354 38-87 (87)
72 2rsp_A RSV protease; hydrolase 43.0 21 0.00073 29.9 3.8 25 91-117 27-51 (124)
73 3ka2_A [L-Ala51;Gly51']HIV-1 p 40.4 22 0.00074 32.5 3.8 29 85-115 9-37 (203)
74 1bxo_A Protein (penicillopepsi 38.9 28 0.00095 33.8 4.7 42 250-304 3-44 (323)
75 1ibq_A Aspergillopepsin; aspar 37.7 29 0.001 33.7 4.6 41 251-304 3-43 (325)
76 1izd_A Aspartic proteinase; su 35.9 34 0.0012 33.2 4.7 41 251-304 4-44 (323)
77 3s64_A AC-SLP-1, saposin-like 29.7 9.3 0.00032 30.0 -0.5 38 378-417 8-45 (87)
78 1oew_A Endothiapepsin; hydrola 26.7 61 0.0021 31.4 4.8 43 251-304 3-46 (329)
79 3c9x_A Trichoderma reesei aspa 25.0 68 0.0023 31.0 4.8 43 251-304 3-46 (329)
80 1mpp_A Pepsin; hydrolase(acid 23.9 58 0.002 31.9 4.1 44 250-304 4-49 (361)
81 4g1a_A AQ-C16C19 peptide; heli 23.1 23 0.00077 21.3 0.5 13 382-394 15-27 (32)
82 3ka2_A [L-Ala51;Gly51']HIV-1 p 22.9 82 0.0028 28.7 4.5 30 85-116 113-142 (203)
83 2apr_A Rhizopuspepsin; hydrola 21.5 80 0.0027 30.4 4.5 43 251-304 4-46 (325)
No 1
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=3.7e-86 Score=706.12 Aligned_cols=474 Identities=64% Similarity=1.151 Sum_probs=399.6
Q ss_pred EEEeeEeecCchhhhHHhhhhhHhhhccCCcccccccccC-CCCceeEeceecCCceEEEEEEeCCCCceEEEEEeCCCC
Q 010486 29 RRIGLKKRRLDLHSLNAARITRKERYMGGAGVSGVRHRLG-DSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSS 107 (509)
Q Consensus 29 ~rvpL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs 107 (509)
+||||+|++..++.+.+.+........ ..+++ ...+ .++...+||.|+.+.+|+++|+||||||+|+|+|||||+
T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs 76 (478)
T 1qdm_A 1 VRIALKKRPIDRNSRVATGLSGGEEQP-LLSGA---NPLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSS 76 (478)
T ss_dssp CEEEEEECCCCHHHHHHHHTC--------------------CCSSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCC
T ss_pred CeeeeeeccchHHHHHhcchhhhhHHH-HHhhc---ccccCcCCCceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCc
Confidence 489999999998888775532111000 00111 1111 134567999999999999999999999999999999999
Q ss_pred cEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCcEEEEEEEEEEEEceEEecCeEEEEEEEeCCcccccc
Q 010486 108 NLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLA 187 (509)
Q Consensus 108 ~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~ 187 (509)
++||+|..|..+..|..|+.|+|++|+||+..++.|.+.|++|++.|.+++|+|++|+..++++.||++....+..|...
T Consensus 77 ~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~~~ 156 (478)
T 1qdm_A 77 NLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVA 156 (478)
T ss_dssp CCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHHHC
T ss_pred ceEEecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCcccccc
Confidence 99999999964568999999999999999999999999999999999999999999999999999999998766556667
Q ss_pred ceeeEeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCCCCCCCcEEEECCcCCCCcccceEEEecCCcCCcEEE
Q 010486 188 RFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVN 267 (509)
Q Consensus 188 ~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~ 267 (509)
.++||||||++..+.....|++++|++||+|++++||+||.+..+...+|+|+|||+|+++|.|+++|+|+.+.+||.
T Consensus 157 ~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~-- 234 (478)
T 1qdm_A 157 KFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQ-- 234 (478)
T ss_dssp SSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEE--
T ss_pred cccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEE--
Confidence 789999999998887777899999999999999999999988643334899999999999999999999999999999
Q ss_pred EEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccc
Q 010486 268 KFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKV 347 (509)
Q Consensus 268 ~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 347 (509)
|.+++|.|+++.+.++..++.+||||||+++++|.+++++|.+++++.+.+...|+..+.+|++.+++.+++.+.|+++
T Consensus 235 -v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~v 313 (478)
T 1qdm_A 235 -FDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKI 313 (478)
T ss_dssp -EEECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHH
T ss_pred -EEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhh
Confidence 9999999999887666678999999999999999999999999999998888999999999999999999999999999
Q ss_pred cccccccccCCccceecceeeeeeccc---cccCCcccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCCce
Q 010486 348 CQQIGLCAFNGAEYVSTGIKTVVEKEN---VSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGES 424 (509)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 424 (509)
|.++|+|..++++.++.++++|+++++ +...++..|.+|+|+++|++|+|++|.|+++|+.+++++|+..+...|.|
T Consensus 314 C~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~ 393 (478)
T 1qdm_A 314 CSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGES 393 (478)
T ss_dssp HHHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCC
T ss_pred hccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeE
Confidence 999999999999999999999999864 34456789999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEE
Q 010486 425 IIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIG 504 (509)
Q Consensus 425 ~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIG 504 (509)
.+||+.+.++|+|+|+|+|+.|+|+|++|+++..++....|+++|+.++++++.++.||||++|||++|+|||++++|||
T Consensus 394 ~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIG 473 (478)
T 1qdm_A 394 AVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIG 473 (478)
T ss_dssp EECGGGGTTCCCEEEEETTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEE
T ss_pred EeecccccccccEEEEECCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEE
Confidence 99999888999999999999999999999998765445689999998887666678999999999999999999999999
Q ss_pred EEecC
Q 010486 505 FAEAA 509 (509)
Q Consensus 505 fa~~~ 509 (509)
||+++
T Consensus 474 fA~a~ 478 (478)
T 1qdm_A 474 FAKAA 478 (478)
T ss_dssp EEEEC
T ss_pred EEeCC
Confidence 99986
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=2.7e-71 Score=574.67 Aligned_cols=367 Identities=39% Similarity=0.753 Sum_probs=325.2
Q ss_pred eEEEeeEeecCchhhhHHhhhhhHhhhccCCcccccccccCC---CCceeEeceecCCceEEEEEEeCCCCceEEEEEeC
Q 010486 28 LRRIGLKKRRLDLHSLNAARITRKERYMGGAGVSGVRHRLGD---SDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDT 104 (509)
Q Consensus 28 ~~rvpL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDT 104 (509)
++||||+|.++.|+.+.+.+.++++++. |++++..+... .....+||.|+.|.+|+++|+||||||+|+|++||
T Consensus 1 ~~~ipl~~~~s~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DT 77 (370)
T 3psg_A 1 LVKVPLVRKKSLRQNLIKDGKLKDFLKT---HKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDT 77 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHHHHH---CCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEEET
T ss_pred CEEEEeEEcCcHHHHHHhcCcHHHHHhh---hhcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEEeC
Confidence 4799999999999999999888888763 33333322211 13567899999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCcEEEEEEEEEEEEceEEecCeEEEEEEEeCCccc
Q 010486 105 GSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQDNVEVGDVVVKDQVFIEATREGSLTF 184 (509)
Q Consensus 105 GSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~ 184 (509)
||+++||+|..|. +..|..|+.|++++|+||+..++.|.++|++|++.|.+++|+|++|+..++++.||++....+..+
T Consensus 78 GSs~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~~ 156 (370)
T 3psg_A 78 GSSNLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFL 156 (370)
T ss_dssp TCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGG
T ss_pred CCCccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeeccccc
Confidence 9999999999997 678999999999999999999999999999999999999999999999999999999988776667
Q ss_pred cccceeeEeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCCCCCCCcEEEECCcCCCCcccceEEEecCCcCCc
Q 010486 185 LLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYW 264 (509)
Q Consensus 185 ~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w 264 (509)
....+|||||||++..+.....|++++|++||+|++++||+||.+.. ..+|+|+|||+|+++|.|+++|+|+.+++||
T Consensus 157 ~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w 234 (370)
T 3psg_A 157 YYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEGYW 234 (370)
T ss_dssp GGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEETTE
T ss_pred ccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeeccccccee
Confidence 77789999999999988878889999999999999999999999862 2389999999999999999999999999999
Q ss_pred EEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHHHhCCCcceecceeehhhccchhhHHHHhhCCCC
Q 010486 265 QVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLP 344 (509)
Q Consensus 265 ~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ 344 (509)
. |.+++|+++++.+. +..++.+||||||+++++|.+++++|.+++++.
T Consensus 235 ~---v~l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~---------------------------- 282 (370)
T 3psg_A 235 Q---ITLDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGAS---------------------------- 282 (370)
T ss_dssp E---EEECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCE----------------------------
T ss_pred E---EEEeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCc----------------------------
Confidence 9 99999999998774 567899999999999999999999999999775
Q ss_pred ccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCCce
Q 010486 345 EKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGES 424 (509)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 424 (509)
....|.|
T Consensus 283 -------------------------------------------------------------------------~~~~g~~ 289 (370)
T 3psg_A 283 -------------------------------------------------------------------------ENSDGEM 289 (370)
T ss_dssp -------------------------------------------------------------------------ECTTCCE
T ss_pred -------------------------------------------------------------------------ccCCCcE
Confidence 0125679
Q ss_pred EecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEE
Q 010486 425 IIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIG 504 (509)
Q Consensus 425 ~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIG 504 (509)
.+||+...++|+|+|+|+|++|+|++++|+++ . .+.|+++|+..+.+.+.++.||||++|||++|+|||++++|||
T Consensus 290 ~v~C~~~~~lP~i~f~~~g~~~~l~~~~yi~~-~---~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riG 365 (370)
T 3psg_A 290 VISCSSIDSLPDIVFTIDGVQYPLSPSAYILQ-D---DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVG 365 (370)
T ss_dssp ECCGGGGGGCCCEEEEETTEEEEECHHHHEEE-C---SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEE
T ss_pred EEECCCcccCCcEEEEECCEEEEECHHHhccc-C---CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEE
Confidence 99999888999999999999999999999998 2 2479999998876555566899999999999999999999999
Q ss_pred EEecC
Q 010486 505 FAEAA 509 (509)
Q Consensus 505 fa~~~ 509 (509)
||+|+
T Consensus 366 fA~a~ 370 (370)
T 3psg_A 366 LAPVA 370 (370)
T ss_dssp EEEBC
T ss_pred EEEcC
Confidence 99986
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.8e-70 Score=570.22 Aligned_cols=374 Identities=38% Similarity=0.764 Sum_probs=299.4
Q ss_pred CceEEEeeEeecCchhhhHHhhh-hhHhhhccCCcccccccccCCCCceeEeceecCCceEEEEEEeCCCCceEEEEEeC
Q 010486 26 NGLRRIGLKKRRLDLHSLNAARI-TRKERYMGGAGVSGVRHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDT 104 (509)
Q Consensus 26 ~~~~rvpL~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDT 104 (509)
++++||||+|+++.++.+.+.+. .+++++.+.. .+....+. .....+||.|+.+.+|+++|+||||||+|+|+|||
T Consensus 6 ~~~~~i~l~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DT 82 (383)
T 2x0b_A 6 TTFKRIFLKRMPSIRESLKERGVDMARLGPEWSQ-PMKRLTLG--NTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDT 82 (383)
T ss_dssp ------------------------------------------------CEEEEEEETTTEEEEEEEETTTTEEEEEEEET
T ss_pred CcEEEEEEEECCcHHHHHHHhCchHHHHHHhhcc-cccccccc--CCcceEeeeecCCCEEEEEEEECCCCcEEEEEEeC
Confidence 34789999999998888777665 4433321100 00100000 13456899999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCC-CcccCCCcccCCCCCCCceecCcEEEEEcCCCcEEEEEEEEEEEEceEEecCeEEEEEEEeCCcc
Q 010486 105 GSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQDNVEVGDVVVKDQVFIEATREGSLT 183 (509)
Q Consensus 105 GSs~~WV~~~~C~~-~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~ 183 (509)
||+++||+|..|.. +..|..|+.|+|++|+||+..++.|.++|++|++.|.+++|+|++|+..++ +.||++....+..
T Consensus 83 GSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g~~ 161 (383)
T 2x0b_A 83 GSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMPALP 161 (383)
T ss_dssp TCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECCHHH
T ss_pred CCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecCCcc
Confidence 99999999999962 358999999999999999999999999999999999999999999999999 9999999876655
Q ss_pred ccccceeeEeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCCCCC--CCcEEEECCcCCCCcccceEEEecCCc
Q 010486 184 FLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAE--EGGEIVFGGVDPKHFKGKHTYVPVTKK 261 (509)
Q Consensus 184 ~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~--~~G~L~fGgiD~~~~~g~l~~~pv~~~ 261 (509)
|....+|||||||++..+..+..|++++|++||+|++++||+||++..... .+|+|+|||+|+++|.|+++|+|+.+.
T Consensus 162 f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~ 241 (383)
T 2x0b_A 162 FMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT 241 (383)
T ss_dssp HTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST
T ss_pred cccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC
Confidence 667788999999999988878889999999999999999999999864321 389999999999999999999999999
Q ss_pred CCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHHHhCCCcceecceeehhhccchhhHHHHhhC
Q 010486 262 GYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSG 341 (509)
Q Consensus 262 ~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 341 (509)
+||. |.+++|+|+++.+. +..++.+||||||+++++|.+++++|.+++++.
T Consensus 242 ~~w~---v~l~~i~v~~~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~------------------------- 292 (383)
T 2x0b_A 242 GVWQ---IQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLMEALGAK------------------------- 292 (383)
T ss_dssp TSCE---EEECEEEESSCCCB-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCE-------------------------
T ss_pred ceEE---EEEeEEEeCCceEE-cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCc-------------------------
Confidence 9999 99999999998753 567899999999999999999999999999764
Q ss_pred CCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCC
Q 010486 342 LLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPM 421 (509)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 421 (509)
+ ..
T Consensus 293 ----------------------------------------------------------------------------~-~~ 295 (383)
T 2x0b_A 293 ----------------------------------------------------------------------------K-RL 295 (383)
T ss_dssp ----------------------------------------------------------------------------E-CS
T ss_pred ----------------------------------------------------------------------------c-cC
Confidence 1 24
Q ss_pred CceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeeeccCCCCCCCceEECHhhhcceEEEEeCCCC
Q 010486 422 GESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKL 501 (509)
Q Consensus 422 ~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~ 501 (509)
|.|.++|+.+.++|+|+|+|+|++|+|++++|+++..+.+...|+++|+..+.+.+.++.||||++|||++|+|||++++
T Consensus 296 g~~~v~C~~~~~~P~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~ 375 (383)
T 2x0b_A 296 FDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNN 375 (383)
T ss_dssp SCEEEEGGGTTTCCCEEEEETTEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTT
T ss_pred CcEEEeccccccCceEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCC
Confidence 67899999888999999999999999999999998654445689999998876655667999999999999999999999
Q ss_pred eEEEEecC
Q 010486 502 RIGFAEAA 509 (509)
Q Consensus 502 rIGfa~~~ 509 (509)
|||||+++
T Consensus 376 rIGfA~a~ 383 (383)
T 2x0b_A 376 RIGFALAR 383 (383)
T ss_dssp EEEEEEEC
T ss_pred EEeEEEcC
Confidence 99999986
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.5e-64 Score=519.09 Aligned_cols=331 Identities=47% Similarity=0.875 Sum_probs=293.5
Q ss_pred ceeEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCc
Q 010486 72 EDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS 151 (509)
Q Consensus 72 ~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs 151 (509)
...+||.|+.+.+|+++|+||||||+++|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.++|++|+
T Consensus 12 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 90 (351)
T 1tzs_A 12 SAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGS 90 (351)
T ss_dssp --CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCBCCSCEEEEESSSCE
T ss_pred ccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-ccccCCCCcCCcccCcceEECCCEEEEEeCCCC
Confidence 3458999999999999999999999999999999999999999996 568999999999999999999999999999999
Q ss_pred EEEEEEEEEEEEceEEecCeEEEEEEEeCCccccccceeeEeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCC
Q 010486 152 ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 231 (509)
Q Consensus 152 ~~G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~ 231 (509)
+.|.+++|+|++++..++++.||++....+..+....++||||||++..+.....+++++|++||.|.+++||+||.+..
T Consensus 91 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~ 170 (351)
T 1tzs_A 91 LSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNP 170 (351)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC
T ss_pred eEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCC
Confidence 99999999999999999999999998766655666788999999999888777789999999999999999999999874
Q ss_pred CCCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHH
Q 010486 232 DAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINH 311 (509)
Q Consensus 232 ~~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~ 311 (509)
....+|+|+|||+|+++|.|+++|+|+.+.+||. |.+++|+|+++.+. +..+..+||||||+++++|.+++++|.+
T Consensus 171 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~---v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~~~~~~l~~ 246 (351)
T 1tzs_A 171 EGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQ---IALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPSDKIKQLQN 246 (351)
T ss_dssp --CTTCEEEETSCCGGGBCSCCEEEECSEETTEE---EEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHH
T ss_pred CCCCCCEEEECCCCHHHcCCceEEEecCCCceEE---EEeCEEEECCceEE-cCCCceEEeccCCcceeCCHHHHHHHHH
Confidence 3334899999999999999999999999999999 99999999998753 4567899999999999999999999999
Q ss_pred HhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHH
Q 010486 312 AIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVV 391 (509)
Q Consensus 312 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (509)
++++..
T Consensus 247 ~~~~~~-------------------------------------------------------------------------- 252 (351)
T 1tzs_A 247 AIGAAP-------------------------------------------------------------------------- 252 (351)
T ss_dssp HHTCEE--------------------------------------------------------------------------
T ss_pred HhCCcc--------------------------------------------------------------------------
Confidence 997640
Q ss_pred HHHHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeee
Q 010486 392 WVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMA 471 (509)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~ 471 (509)
.. +.|.++|+....+|+|+|+|+|++++|++++|+++....+...|+++|+.
T Consensus 253 ---------------------------~~-g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~~~~~ 304 (351)
T 1tzs_A 253 ---------------------------VD-GEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQG 304 (351)
T ss_dssp ---------------------------CS-SSEEECGGGGGGSCCEEEEETTEEEEECTTTSEECC-----CCEEESEEE
T ss_pred ---------------------------cC-CeEEEeCCCCccCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEE
Confidence 11 56889999877899999999999999999999998654334689999988
Q ss_pred ccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 472 FDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 472 ~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
.+.+.+.++.||||++|||++|+|||++++|||||+++
T Consensus 305 ~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~ 342 (351)
T 1tzs_A 305 LDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAV 342 (351)
T ss_dssp CCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred CCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECC
Confidence 76544455689999999999999999999999999985
No 5
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=5.7e-64 Score=510.69 Aligned_cols=321 Identities=41% Similarity=0.799 Sum_probs=290.1
Q ss_pred ceeEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCc
Q 010486 72 EDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS 151 (509)
Q Consensus 72 ~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs 151 (509)
...+||.|+.+.+|+++|+||||||+++|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.++|++|+
T Consensus 3 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (323)
T 3cms_A 3 VASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGS 81 (323)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE
T ss_pred cceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCC-cccccCCCCCCCccCCCeEECCcEEEEEeCCCC
Confidence 4568999999999999999999999999999999999999999995 568999999999999999999999999999999
Q ss_pred EEEEEEEEEEEEceEEecCeEEEEEEEeCCccccccceeeEeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCC
Q 010486 152 ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 231 (509)
Q Consensus 152 ~~G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~ 231 (509)
+.|.+++|+|++++..++++.||++....+..|.....+||||||++..+.....+++++|++||.|.+++||+||.+..
T Consensus 82 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~ 161 (323)
T 3cms_A 82 MQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNG 161 (323)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTS
T ss_pred eEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCC
Confidence 99999999999999999999999999876644555678999999999888777889999999999999999999998863
Q ss_pred CCCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHH
Q 010486 232 DAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINH 311 (509)
Q Consensus 232 ~~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~ 311 (509)
. .|+|+|||+|+++|.|+++|+|+.+.+||. |.+++|+|+++.+. +..+..+||||||+++++|.+++++|.+
T Consensus 162 ~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~---v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~ 234 (323)
T 3cms_A 162 Q---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQ---FTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQ 234 (323)
T ss_dssp S---CEEEEESCCCGGGEEEEEEEEECSSBTTBE---EEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHH
T ss_pred C---CEEEEECCCChhhccCceEEEECccCCeEE---EEEeeEEECCEEee-cCCCcEEEEecCCccEeCCHHHHHHHHH
Confidence 2 499999999999999999999999999999 99999999998764 3567899999999999999999999999
Q ss_pred HhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHH
Q 010486 312 AIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVV 391 (509)
Q Consensus 312 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (509)
++++..
T Consensus 235 ~~~~~~-------------------------------------------------------------------------- 240 (323)
T 3cms_A 235 AIGATQ-------------------------------------------------------------------------- 240 (323)
T ss_dssp HHTCEE--------------------------------------------------------------------------
T ss_pred HhCCee--------------------------------------------------------------------------
Confidence 997640
Q ss_pred HHHHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeee
Q 010486 392 WVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMA 471 (509)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~ 471 (509)
...+.|.++|+....+|+|+|+|+|++++|++++|+++ ....|+++|+.
T Consensus 241 ---------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~----~~~~C~~~i~~ 289 (323)
T 3cms_A 241 ---------------------------NQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQ----DQGFCTSGFQS 289 (323)
T ss_dssp ---------------------------ETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEE----ETTEEEESEEE
T ss_pred ---------------------------cCCCcEEEECCCCccCceEEEEECCEEEEECHHHhccC----CCCEEEEEEEe
Confidence 11467889999888999999999999999999999998 23589998986
Q ss_pred ccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 472 FDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 472 ~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
.+ .++.||||++|||++|+|||++++|||||+++
T Consensus 290 ~~----~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 290 EN----HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp C-------CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CC----CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 53 34589999999999999999999999999986
No 6
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=6.4e-64 Score=511.57 Aligned_cols=326 Identities=40% Similarity=0.811 Sum_probs=293.0
Q ss_pred eeEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCcE
Q 010486 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSI 152 (509)
Q Consensus 73 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~ 152 (509)
..+||.|+.+.+|+++|+||||||+++|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 81 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSL 81 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCC-CcccCCcCcCCcccCcCeEECCcEEEEEECCceE
Confidence 468999999999999999999999999999999999999999997 4579999999999999999999999999999999
Q ss_pred EEEEEEEEEEEceEEecCeEEEEEEEeCCccccccceeeEeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCCC
Q 010486 153 SGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPD 232 (509)
Q Consensus 153 ~G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~ 232 (509)
.|.+++|+|++++..++++.||++....+..|....++||||||++..+..+..+++++|++||+|++++||+||.+...
T Consensus 82 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~ 161 (329)
T 1dpj_A 82 EGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSK 161 (329)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGG
T ss_pred EEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCC
Confidence 99999999999999999999999998765445566789999999998877777889999999999999999999987532
Q ss_pred -CCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHH
Q 010486 233 -AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINH 311 (509)
Q Consensus 233 -~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~ 311 (509)
...+|+|+|||+|+++|.|+++|+|+.+.+||. |.+++|+++++.+. ..+..+||||||+++++|++++++|.+
T Consensus 162 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~---v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~ 236 (329)
T 1dpj_A 162 DTENGGEATFGGIDESKFKGDITWLPVRRKAYWE---VKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINA 236 (329)
T ss_dssp TCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBE---EEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHH
T ss_pred CCCCCcEEEEcCCChhhcCCceEEEEcCCCceEE---EEeeeEEECCeEec--CCCccEEeeCCCCcEECCHHHHHHHHH
Confidence 224799999999999999999999999999999 99999999998764 356799999999999999999999999
Q ss_pred HhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHH
Q 010486 312 AIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVV 391 (509)
Q Consensus 312 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (509)
++++.
T Consensus 237 ~~~~~--------------------------------------------------------------------------- 241 (329)
T 1dpj_A 237 EIGAK--------------------------------------------------------------------------- 241 (329)
T ss_dssp HHTCE---------------------------------------------------------------------------
T ss_pred HhCCc---------------------------------------------------------------------------
Confidence 99754
Q ss_pred HHHHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeee
Q 010486 392 WVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMA 471 (509)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~ 471 (509)
....+.|.++|+....+|+|+|+|+|++++|++++|+++.. ..|+++|+.
T Consensus 242 --------------------------~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----~~C~~~~~~ 291 (329)
T 1dpj_A 242 --------------------------KGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS----GSCISAITP 291 (329)
T ss_dssp --------------------------ECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEET----TEEEECEEE
T ss_pred --------------------------cCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEecCC----CEEEEEEEe
Confidence 01256789999988889999999999999999999999753 479999988
Q ss_pred ccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 472 FDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 472 ~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
.+.+.+.++.||||++|||++|+|||++++|||||+++
T Consensus 292 ~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 292 MDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp CCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 76544456789999999999999999999999999986
No 7
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=3.6e-64 Score=515.63 Aligned_cols=332 Identities=41% Similarity=0.867 Sum_probs=297.6
Q ss_pred CceeEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCC-CcccCCCcccCCCCCCCceecCcEEEEEcCC
Q 010486 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGS 149 (509)
Q Consensus 71 ~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~-~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~ 149 (509)
+...+||.|+.+.+|+++|+||||||+++|++||||+++||+|..|.. ...|..++.|+|++|+||+..++.|.++|++
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 85 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYST 85 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEETT
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEECC
Confidence 556799999999999999999999999999999999999999999963 3479899999999999999999999999999
Q ss_pred CcEEEEEEEEEEEEceEEecCeEEEEEEEeCCccccccceeeEeeccccccccCCCCchHHHHHHcCCCCCceEEEEecC
Q 010486 150 GSISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNR 229 (509)
Q Consensus 150 gs~~G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~ 229 (509)
|++.|.+++|+|+|++..+ ++.||++....+..+....++||||||++..+.....|++++|++||.|.+++||+||.+
T Consensus 86 gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~ 164 (341)
T 3k1w_A 86 GTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNR 164 (341)
T ss_dssp EEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECC
T ss_pred cEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeC
Confidence 9999999999999999999 999999998766446667789999999998887778899999999999999999999998
Q ss_pred CC--CCCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHH
Q 010486 230 DP--DAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVT 307 (509)
Q Consensus 230 ~~--~~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~ 307 (509)
.. ....+|+|+|||+|+++|.|+++|+|+.+.++|. |.+++|++++..+. +..+..++|||||+++++|.++++
T Consensus 165 ~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~---v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~ 240 (341)
T 3k1w_A 165 DSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQ---IQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIE 240 (341)
T ss_dssp CC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCE---EEECCEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHH
T ss_pred CCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEE---EEEeEEEECCEEee-cCCCCEEEEECCCChhcCCHHHHH
Confidence 64 1234899999999999999999999999999999 99999999998653 456789999999999999999999
Q ss_pred HHHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhh
Q 010486 308 EINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACE 387 (509)
Q Consensus 308 ~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (509)
+|++++++..
T Consensus 241 ~i~~~~~~~~---------------------------------------------------------------------- 250 (341)
T 3k1w_A 241 KLMEALGAKK---------------------------------------------------------------------- 250 (341)
T ss_dssp HHHHHHTCEE----------------------------------------------------------------------
T ss_pred HHHHHcCCee----------------------------------------------------------------------
Confidence 9999997650
Q ss_pred hHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeee
Q 010486 388 MAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCIS 467 (509)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~ 467 (509)
...| |.+||+...++|+|+|+|+|++++|++++|+++....+...|++
T Consensus 251 -------------------------------~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~~ 298 (341)
T 3k1w_A 251 -------------------------------RLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTL 298 (341)
T ss_dssp -------------------------------CSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEEB
T ss_pred -------------------------------cCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCCCCCeEEe
Confidence 1135 99999988889999999999999999999999865544578999
Q ss_pred eeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 468 GFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 468 ~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
+|+..+.+...++.||||++|||++|+|||++++|||||+++
T Consensus 299 ~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 299 AIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp SEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 999877555556789999999999999999999999999986
No 8
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=5.4e-64 Score=510.00 Aligned_cols=319 Identities=42% Similarity=0.811 Sum_probs=285.4
Q ss_pred eEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCcEE
Q 010486 74 ILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSIS 153 (509)
Q Consensus 74 ~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~ 153 (509)
.+||+|+.|.+|+++|+||||||+++|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 80 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCK-SNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGSME 80 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCC-ccccCCCCCCCCCCCcCeEcCCcEEEEEECCcEEE
Confidence 46899999999999999999999999999999999999999997 66899999999999999999999999999999999
Q ss_pred EEEEEEEEEEceEEecCeEEEEEEEeCCccccccceeeEeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCCCC
Q 010486 154 GFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDA 233 (509)
Q Consensus 154 G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~ 233 (509)
|.+++|+|++++..++++.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||.+.
T Consensus 81 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~--- 157 (320)
T 4aa9_A 81 GFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN--- 157 (320)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS---
T ss_pred EEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC---
Confidence 99999999999999999999999987765566677899999999988877788999999999999999999999985
Q ss_pred CCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHHHh
Q 010486 234 EEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAI 313 (509)
Q Consensus 234 ~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~~~ 313 (509)
...|+|+|||+|+++|.|+++|+|+.+.+||. |.+++|+++++.+. +..+..++|||||+++++|++++++|.+++
T Consensus 158 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~---v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~ 233 (320)
T 4aa9_A 158 GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQ---FTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPSSDILKIQMAI 233 (320)
T ss_dssp SSCCEEEETCCCGGGEEEEEEEEECSSBTTBE---EEECEEEETTEEEE-STTCEEEEECTTCSSEEEEHHHHHHHHHHT
T ss_pred CCCeEEEEcccCHHHccCceEEEEcccCCceE---EEEeEEEECCEEec-cCCCcEEEEECCCCcEECCHHHHHHHHHHh
Confidence 23899999999999999999999999999999 99999999998775 346789999999999999999999999999
Q ss_pred CCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHHHH
Q 010486 314 GGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWV 393 (509)
Q Consensus 314 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (509)
++..
T Consensus 234 ~~~~---------------------------------------------------------------------------- 237 (320)
T 4aa9_A 234 GATE---------------------------------------------------------------------------- 237 (320)
T ss_dssp TCEE----------------------------------------------------------------------------
T ss_pred CCcc----------------------------------------------------------------------------
Confidence 7640
Q ss_pred HHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeeecc
Q 010486 394 QNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFD 473 (509)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~ 473 (509)
...+.|.+||+....+|+|+|+|+|++++|++++|+.+ ....|+++|+..
T Consensus 238 -------------------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~----~~~~C~~~i~~~- 287 (320)
T 4aa9_A 238 -------------------------NRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTSK----DQGFCTSGFQGD- 287 (320)
T ss_dssp -------------------------CTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEEE----ETTEEEESEEEE-
T ss_pred -------------------------cCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhccC----CCCeEEEEEEcC-
Confidence 12467999999888899999999999999999999976 235899988863
Q ss_pred CCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 474 LPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 474 ~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
..++.||||++|||++|+|||++++|||||+||
T Consensus 288 ---~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 288 ---NNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp ---TTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---CCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 234679999999999999999999999999986
No 9
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.2e-63 Score=508.55 Aligned_cols=322 Identities=41% Similarity=0.780 Sum_probs=291.5
Q ss_pred eEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCcEE
Q 010486 74 ILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSIS 153 (509)
Q Consensus 74 ~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~ 153 (509)
.+||.|+.+.+|+++|+||||||+++|++||||+++||+|..|. +..|..++.|+|++|+||+..++.|.++|++|++.
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~ 81 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMR 81 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-cccccCCCcCCCccCCCeEeCCcEEEEEECCCCeE
Confidence 47999999999999999999999999999999999999999996 56799999999999999999999999999999999
Q ss_pred EEEEEEEEEEceEEecCeEEEEEEEeCCccccccceeeEeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCCCC
Q 010486 154 GFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDA 233 (509)
Q Consensus 154 G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~ 233 (509)
|.+++|+|++++..++++.||++....+..+.....+||||||++..+.....|++++|++||.|.+++||+||.+...
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~- 160 (324)
T 1am5_A 82 GILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGA- 160 (324)
T ss_dssp EEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTC-
T ss_pred EEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCCC-
Confidence 9999999999999999999999998766556667889999999998887777889999999999999999999988632
Q ss_pred CCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHHHh
Q 010486 234 EEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAI 313 (509)
Q Consensus 234 ~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~~~ 313 (509)
.+|+|+|||+|+++|.|+++|+|+.+.+||. |.+++|+++++.+. +.+ ..+||||||+++++|++++++|.+++
T Consensus 161 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~---v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~~~~~~l~~~~ 234 (324)
T 1am5_A 161 -NGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQ---VALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPVSALANIMKDI 234 (324)
T ss_dssp -SCEEEEESSCCGGGBCSCCEEEEEEEETTEE---EEECEEEETTEECC-CCC-EEEEECTTCSSEEECTTTHHHHHHHH
T ss_pred -CCcEEEECccCHHHcCCceEEEecCCCcEEE---EEEeEEEECCceee-ccC-ceEEEecCCccEECCHHHHHHHHHHh
Confidence 3899999999999999999999999899999 99999999998753 333 89999999999999999999999988
Q ss_pred CCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHHHH
Q 010486 314 GGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWV 393 (509)
Q Consensus 314 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (509)
++.
T Consensus 235 ~~~----------------------------------------------------------------------------- 237 (324)
T 1am5_A 235 GAS----------------------------------------------------------------------------- 237 (324)
T ss_dssp TCE-----------------------------------------------------------------------------
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 642
Q ss_pred HHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeeecc
Q 010486 394 QNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFD 473 (509)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~ 473 (509)
...|.|.++|+...++|+|+|+|+|++++|++++|+++. ...|+++|+..+
T Consensus 238 -------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~----~~~C~~~~~~~~ 288 (324)
T 1am5_A 238 -------------------------ENQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGD----QAFCTSGLGSSG 288 (324)
T ss_dssp -------------------------ECCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEES----SSCEEECEEECC
T ss_pred -------------------------ccCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC----CCeEEEEEEECc
Confidence 013568899998889999999999999999999999985 358999998876
Q ss_pred CCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 474 LPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 474 ~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
.+.+.++.||||++|||++|+|||++++|||||+++
T Consensus 289 ~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 289 VPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp SCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred cCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 544455789999999999999999999999999986
No 10
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.1e-63 Score=509.78 Aligned_cols=325 Identities=43% Similarity=0.833 Sum_probs=292.2
Q ss_pred eEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCcEE
Q 010486 74 ILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSIS 153 (509)
Q Consensus 74 ~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~ 153 (509)
.+||+ +.+.+|+++|+||||||+++|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.++|++|++.
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 81 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLT 81 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-CcccCCCCcCCCccCCCeEECCcEEEEEeCCCCeE
Confidence 47888 88999999999999999999999999999999999996 45799999999999999999999999999999999
Q ss_pred EEEEEEEEEEceEEecCeEEEEEEEeCCccccccceeeEeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCCCC
Q 010486 154 GFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDA 233 (509)
Q Consensus 154 G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~ 233 (509)
|.+++|+|++++..++++.||++....+..+.....+||||||++..+.....|++++|++||.|.+++||+||.+....
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~ 161 (329)
T 1htr_B 82 GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGS 161 (329)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSS
T ss_pred EEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCC
Confidence 99999999999999999999999877665566678899999999988877788999999999999999999999886321
Q ss_pred CCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHHHh
Q 010486 234 EEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAI 313 (509)
Q Consensus 234 ~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~~~ 313 (509)
.+|+|+|||+|+++|.|+++|+|+.+++||. |.+++|+|+++.+..+..+..+||||||+++++|++++++|.+++
T Consensus 162 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~---v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~ 237 (329)
T 1htr_B 162 -SGGAVVFGGVDSSLYTGQIYWAPVTQELYWQ---IGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQAT 237 (329)
T ss_dssp -EEEEEEESSCCGGGEEEEEEEEEBCSSSSCE---EEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHH
T ss_pred -CCcEEEEcccCHHHcCCceEEEECCCCceEE---EEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHh
Confidence 3799999999999999999999999999999 999999999987643456789999999999999999999999999
Q ss_pred CCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHHHH
Q 010486 314 GGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWV 393 (509)
Q Consensus 314 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (509)
++..
T Consensus 238 ~~~~---------------------------------------------------------------------------- 241 (329)
T 1htr_B 238 GAQE---------------------------------------------------------------------------- 241 (329)
T ss_dssp TCEE----------------------------------------------------------------------------
T ss_pred CCee----------------------------------------------------------------------------
Confidence 7640
Q ss_pred HHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeeecc
Q 010486 394 QNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFD 473 (509)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~ 473 (509)
...+.|.++|+....+|+|+|+|+|++++|++++|+++.. +.|+++|+..+
T Consensus 242 -------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----g~C~~~~~~~~ 292 (329)
T 1htr_B 242 -------------------------DEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNN----GYCTVGVEPTY 292 (329)
T ss_dssp -------------------------CTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEECS----SCEEESEEEEC
T ss_pred -------------------------cCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhcccCC----CEEEEEEEECC
Confidence 1245688999987789999999999999999999999854 38999998876
Q ss_pred CCCCCCC-ceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 474 LPPPRGP-LWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 474 ~~~~~~~-~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
.+.+.++ .||||++|||++|+|||++++|||||+++
T Consensus 293 ~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 293 LSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp CCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 5444456 89999999999999999999999999986
No 11
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=8.2e-63 Score=511.89 Aligned_cols=321 Identities=33% Similarity=0.646 Sum_probs=288.4
Q ss_pred CceeEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCC
Q 010486 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG 150 (509)
Q Consensus 71 ~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~g 150 (509)
....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.++|++|
T Consensus 50 ~~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 128 (375)
T 1miq_A 50 ENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGSG 128 (375)
T ss_dssp TTBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC-cccccCCCcCCCccCCceEECCcEEEEEeCCC
Confidence 34568999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred cEEEEEEEEEEEEceEEecCeEEEEEEE----eCCccccccceeeEeeccccccccCCCCchHHHHHHcCCCCCceEEEE
Q 010486 151 SISGFFSQDNVEVGDVVVKDQVFIEATR----EGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFW 226 (509)
Q Consensus 151 s~~G~~~~D~v~~gg~~~~~~~fg~a~~----~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~ 226 (509)
++.|.+++|+|++|+..+++ .|||+.. .+ .|....++||||||++..+.....|++++|++||.|.+++||+|
T Consensus 129 s~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~--~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~ 205 (375)
T 1miq_A 129 TVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP--IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFY 205 (375)
T ss_dssp EEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTT--HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEE
T ss_pred eEEEEEEEEEEEEcCceECc-EEEEEEecccccc--ccccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEE
Confidence 99999999999999999999 9999987 43 45556789999999998887778899999999999999999999
Q ss_pred ecCCCCCCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHH
Q 010486 227 LNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVV 306 (509)
Q Consensus 227 l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~ 306 (509)
|.+.. ..+|+|+|||+|+++|.|+++|+|+.+.+||. |.++ |+|+++.+ .++.+||||||+++++|.+++
T Consensus 206 L~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~---v~l~-i~v~g~~~----~~~~aiiDSGTs~~~lP~~~~ 275 (375)
T 1miq_A 206 LPVHD--VHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQ---IDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFL 275 (375)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEEBSSSSSSE---EEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHH
T ss_pred ecCCC--CCCeEEEEcccCHHHcCCceEEEecCCCceEE---EEEE-EEECCEEc----ccceEEecCCCccEEcCHHHH
Confidence 99863 24899999999999999999999999999999 9999 99999876 467899999999999999999
Q ss_pred HHHHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhh
Q 010486 307 TEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSAC 386 (509)
Q Consensus 307 ~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (509)
++|.+++++. +
T Consensus 276 ~~l~~~~~~~---------------------------------------~------------------------------ 286 (375)
T 1miq_A 276 NKFFANLNVI---------------------------------------K------------------------------ 286 (375)
T ss_dssp HHHHHHHTCE---------------------------------------E------------------------------
T ss_pred HHHHHHhCCc---------------------------------------c------------------------------
Confidence 9999999764 0
Q ss_pred hhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceee
Q 010486 387 EMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCI 466 (509)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~ 466 (509)
+...|.|.++|+. ..+|+|+|+|+|++++|+|++|+++....+...|+
T Consensus 287 -------------------------------~~~~g~~~~~C~~-~~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C~ 334 (375)
T 1miq_A 287 -------------------------------VPFLPFYVTTCDN-KEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCM 334 (375)
T ss_dssp -------------------------------CTTSSCEEEETTC-TTCCCEEEECSSCEEEECGGGSEEESSSSSCSEEE
T ss_pred -------------------------------cCCCCeEEEECCC-CCCCcEEEEECCEEEEECHHHhEeeccCCCCCeEE
Confidence 1225678999997 78999999999999999999999986543446899
Q ss_pred eeeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 467 SGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 467 ~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
++|+..+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 335 ~~~~~~~~~---~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 335 ITMLPVDID---SNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp ESEEECCSS---SSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEECCCC---CCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 999876531 2589999999999999999999999999985
No 12
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=2e-62 Score=518.93 Aligned_cols=321 Identities=30% Similarity=0.557 Sum_probs=289.4
Q ss_pred CceeEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCC
Q 010486 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG 150 (509)
Q Consensus 71 ~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~g 150 (509)
....+||.|+.+.+|+++|+||||||+++|++||||+++||+|..|. +..|..++.|+|+.|+||+..++.|.++|++|
T Consensus 125 ~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~-s~~C~~~~~ydps~SsT~~~~~~~f~i~YgdG 203 (451)
T 3qvc_A 125 EFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT-SESCESKNHYDSSKSKTYEKDDTPVKLTSKAG 203 (451)
T ss_dssp --CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEECSSE
T ss_pred cCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-ccccCCCCCCCCCCCcccccCCCEEEEEECCC
Confidence 45678999999999999999999999999999999999999999996 57999999999999999999999999999999
Q ss_pred cEEEEEEEEEEEEceEEecCeEEEEEEE----eCCccccccceeeEeeccccccccCCCCchHHHHHHcCCCCCceEEEE
Q 010486 151 SISGFFSQDNVEVGDVVVKDQVFIEATR----EGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFW 226 (509)
Q Consensus 151 s~~G~~~~D~v~~gg~~~~~~~fg~a~~----~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~ 226 (509)
++.|.+++|+|++|+..++ +.||++.. .++ +....++||||||++..+..+..|++++|++||.|++++||+|
T Consensus 204 s~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~--f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~ 280 (451)
T 3qvc_A 204 TISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF--YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIY 280 (451)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH--HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEE
T ss_pred EEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC--ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEE
Confidence 9999999999999999999 99999987 444 5556789999999998887778899999999999999999999
Q ss_pred ecCCCCCCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHH
Q 010486 227 LNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVV 306 (509)
Q Consensus 227 l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~ 306 (509)
|.+.. ..+|+|+|||+|+++|.|+++|+|+.+.+||. |.++ |.+++. +..+..++|||||+++++|++++
T Consensus 281 L~~~~--~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~---v~l~-I~Vgg~----~~~~~~aiiDSGTt~i~lP~~~~ 350 (451)
T 3qvc_A 281 LPPEN--KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQ---VDLD-VHFGNV----SSKKANVILDSATSVITVPTEFF 350 (451)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEECSSTTSSE---EEEE-EEETTE----EEEEEEEEECTTBSSEEECHHHH
T ss_pred EcCCC--CCCCEEEECCcchhhcCCceEEEEcccCCeeE---EEEE-EEECCc----cCCCceEEEeCCCccccCCHHHH
Confidence 99873 23899999999999999999999999999999 9999 999998 34567899999999999999999
Q ss_pred HHHHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhh
Q 010486 307 TEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSAC 386 (509)
Q Consensus 307 ~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (509)
++|++++++..
T Consensus 351 ~~i~~~i~a~~--------------------------------------------------------------------- 361 (451)
T 3qvc_A 351 NQFVESASVFK--------------------------------------------------------------------- 361 (451)
T ss_dssp HHHHTTTTCEE---------------------------------------------------------------------
T ss_pred HHHHHHcCCee---------------------------------------------------------------------
Confidence 99999887640
Q ss_pred hhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceee
Q 010486 387 EMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCI 466 (509)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~ 466 (509)
....|.|.+||+ ...+|+|+|+|+|.+++|+|++|+++..+.+...|+
T Consensus 362 -------------------------------~~~~g~y~v~C~-~~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~C~ 409 (451)
T 3qvc_A 362 -------------------------------VPFLSLYVTTCG-NTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCM 409 (451)
T ss_dssp -------------------------------CTTSSCEEEETT-CTTCCCEEEEETTEEEEECHHHHEEECTTTSTTEEE
T ss_pred -------------------------------cCCCCeEEeeCC-cCcCCcEEEEECCEEEEEcHHHheeecccCCCCeEE
Confidence 012577999999 788999999999999999999999987654557899
Q ss_pred eeeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 467 SGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 467 ~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
++|+..+.+ ++.||||++|||++|+|||++++|||||+|+
T Consensus 410 ~~i~~~~~~---~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 410 LNIVPIDLE---KNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp ECEEECCCS---TTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEeCCCC---CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 999876421 4689999999999999999999999999986
No 13
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=5.3e-62 Score=515.17 Aligned_cols=322 Identities=33% Similarity=0.636 Sum_probs=288.2
Q ss_pred CceeEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCC
Q 010486 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG 150 (509)
Q Consensus 71 ~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~g 150 (509)
....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.++|++|
T Consensus 126 ~~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdG 204 (453)
T 2bju_A 126 SNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSG 204 (453)
T ss_dssp CSEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSS
T ss_pred CCCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC-ccccCCCCcCCCccCCceeECCcEEEEEcCCC
Confidence 34679999999999999999999999999999999999999999996 66899999999999999999999999999999
Q ss_pred cEEEEEEEEEEEEceEEecCeEEEEEEEeC--CccccccceeeEeeccccccccCCCCchHHHHHHcCCCCCceEEEEec
Q 010486 151 SISGFFSQDNVEVGDVVVKDQVFIEATREG--SLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLN 228 (509)
Q Consensus 151 s~~G~~~~D~v~~gg~~~~~~~fg~a~~~~--~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~ 228 (509)
++.|.+++|+|++|+.+++ +.||++...+ +..+....++||||||++..+.....|++++|++||.|.+++||+||.
T Consensus 205 s~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~ 283 (453)
T 2bju_A 205 TVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLP 283 (453)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECC
T ss_pred CeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeC
Confidence 9999999999999999999 9999999876 544556678999999999888777889999999999999999999998
Q ss_pred CCCCCCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHH
Q 010486 229 RDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTE 308 (509)
Q Consensus 229 ~~~~~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~ 308 (509)
+.. ..+|+|+|||+|+++|.|+++|+|+.+.+||. |.++ |+|++. + . .++.+||||||+++++|++++++
T Consensus 284 ~~~--~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~---V~l~-I~Vgg~-~--~-~~~~aIiDSGTsl~~lP~~~~~~ 353 (453)
T 2bju_A 284 VHD--KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQ---ITLD-AHVGNI-M--L-EKANCIVDSGTSAITVPTDFLNK 353 (453)
T ss_dssp BTT--TBCEEEEESSCCGGGEEEEEEEEEEEEETTEE---EEEE-EEETTE-E--E-EEEEEEECTTCCSEEECHHHHHH
T ss_pred CCC--CCCeEEEECCCCHHHcCCceEEEecCCCceEE---EEEE-EEECcE-E--e-ccccEEEcCCCCeEecCHHHHHH
Confidence 862 34899999999999999999999999999999 9999 999993 3 2 56789999999999999999999
Q ss_pred HHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhh
Q 010486 309 INHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEM 388 (509)
Q Consensus 309 i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (509)
|.+++++.
T Consensus 354 l~~~i~~~------------------------------------------------------------------------ 361 (453)
T 2bju_A 354 MLQNLDVI------------------------------------------------------------------------ 361 (453)
T ss_dssp HTTTSSCE------------------------------------------------------------------------
T ss_pred HHHHhCCc------------------------------------------------------------------------
Confidence 98887653
Q ss_pred HHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCC-ceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeee
Q 010486 389 AVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMG-ESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCIS 467 (509)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~-~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~ 467 (509)
+...| .|.+||+. ..+|+|+|+|+|++++|+|++|+++....+...|++
T Consensus 362 -----------------------------~~~~g~~~~v~C~~-~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~~ 411 (453)
T 2bju_A 362 -----------------------------KVPFLPFYVTLCNN-SKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCML 411 (453)
T ss_dssp -----------------------------ECTTSSCEEEETTC-TTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEE
T ss_pred -----------------------------ccCCCceEEEecCC-CCCCcEEEEECCEEEEECHHHhEeecccCCCceEEE
Confidence 01234 68999997 789999999999999999999999865434568999
Q ss_pred eeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 468 GFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 468 ~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
+|+..+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 412 ~~~~~~~~---~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 412 NIIGLDFP---VPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp CEEECCCS---SCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEeCCCC---CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99876521 3489999999999999999999999999985
No 14
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.2e-61 Score=493.12 Aligned_cols=318 Identities=30% Similarity=0.521 Sum_probs=284.2
Q ss_pred ceeEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCccc--CCCcccCCCCCCCceecCcEEEEEcCC
Q 010486 72 EDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISC--YFHSRYKSRKSNTYTEIGKSCEINYGS 149 (509)
Q Consensus 72 ~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C--~~~~~f~~~~SsT~~~~~~~~~~~Yg~ 149 (509)
...++|.|+.+..|+++|+|| ||+++|++||||+++||+|..|. ...| ..++.|+|++| ||+..++.|.++|++
T Consensus 6 ~~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~~~y~~~~S-T~~~~~~~~~i~Yg~ 81 (330)
T 1yg9_A 6 PLYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECV-GGACVCPNLQKYEKLKP-KYISDGNVQVKFFDT 81 (330)
T ss_dssp CSCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCC-SGGGGSTTCCCCCCSSC-EEEEEEEEEEEETTT
T ss_pred eeEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-CccCcccccCccCCCCC-ceEECCCEEEEEECC
Confidence 345789999999999999999 89999999999999999999996 5689 88999999999 999999999999999
Q ss_pred CcEEEEEEEEEEEEceEEecCeEEEEEEEeCCccccccceeeEeeccccccc-cCCCCchHHHHHHcCCCCCceEEEEec
Q 010486 150 GSISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIA-VGDAVPVWDNMVEQGLVSEEVFSFWLN 228 (509)
Q Consensus 150 gs~~G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s-~~~~~~~~~~L~~qg~i~~~~FSl~l~ 228 (509)
|++.|.+++|+|++++..++++.||++... +..|....++||||||++..+ .....+++++|++||.| +++||+||.
T Consensus 82 Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l~ 159 (330)
T 1yg9_A 82 GSAVGRGIEDSLTISQLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHHA 159 (330)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEEE
T ss_pred ceEEEEEEEEEEEECCEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEEc
Confidence 999999999999999999999999999987 434556678999999999887 66778899999999999 999999998
Q ss_pred CCCCCCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHH
Q 010486 229 RDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTE 308 (509)
Q Consensus 229 ~~~~~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~ 308 (509)
+..+...+|+|+|||+|+++|+|+++|+|+.+.+||. |.+++|+|+++.+. ..+..+||||||+++++|++++++
T Consensus 160 ~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~---v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP~~~~~~ 234 (330)
T 1yg9_A 160 RFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWK---FRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGPKAYVNP 234 (330)
T ss_dssp ECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCC---EECSEEEETTEEEE--CTTCEEEECTTCSSEEEEHHHHHH
T ss_pred CCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEE---EEeCeEEECCEEEc--CCCcEEEEecCCccccCCHHHHHH
Confidence 8643333799999999999999999999999999999 99999999998764 567899999999999999999999
Q ss_pred HHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhh
Q 010486 309 INHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEM 388 (509)
Q Consensus 309 i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (509)
|++++++..
T Consensus 235 l~~~~~~~~----------------------------------------------------------------------- 243 (330)
T 1yg9_A 235 INEAIGCVV----------------------------------------------------------------------- 243 (330)
T ss_dssp HHHHHTCEE-----------------------------------------------------------------------
T ss_pred HHHHhCCcc-----------------------------------------------------------------------
Confidence 999997640
Q ss_pred HHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCC--ce-EecCCCCCCCCcEEEEECCEEEEECcccceEeeccccccee
Q 010486 389 AVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMG--ES-IIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVC 465 (509)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~--~~-~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C 465 (509)
...| .| .+||+....+|+|+|+|+|++++|++++|+++. ...|
T Consensus 244 ------------------------------~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~~----~~~C 289 (330)
T 1yg9_A 244 ------------------------------EKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQN----GNLC 289 (330)
T ss_dssp ------------------------------EECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEE----TTEE
T ss_pred ------------------------------cCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhcccC----CCcE
Confidence 0123 67 899997778999999999999999999999986 3589
Q ss_pred eeeeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 466 ISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 466 ~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
+++|+.. +.++.||||++|||++|+|||++++|||||+++
T Consensus 290 ~~~i~~~----~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 290 YSGFQPC----GHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EESEEEE----TTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEeC----CCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 9998865 234589999999999999999999999999985
No 15
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=3.6e-61 Score=497.33 Aligned_cols=326 Identities=27% Similarity=0.487 Sum_probs=288.0
Q ss_pred CceeEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCC
Q 010486 71 DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG 150 (509)
Q Consensus 71 ~~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~g 150 (509)
....+||.|+.+.+|+++|+||||||+++|++||||+++||+|..|.....|..++.|+|++|+||+..++.|.+.|++|
T Consensus 6 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 85 (361)
T 1mpp_A 6 SVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTG 85 (361)
T ss_dssp CEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSSC
T ss_pred ccceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECCc
Confidence 45568999999999999999999999999999999999999999995234799999999999999999999999999999
Q ss_pred cEEEEEEEEEEEEceEEecCeEEEEEEEeCC-----ccccccceeeEeeccccccccCC------CCchHHHHHHcCCCC
Q 010486 151 SISGFFSQDNVEVGDVVVKDQVFIEATREGS-----LTFLLARFDGIIGLGFREIAVGD------AVPVWDNMVEQGLVS 219 (509)
Q Consensus 151 s~~G~~~~D~v~~gg~~~~~~~fg~a~~~~~-----~~~~~~~~dGIlGLg~~~~s~~~------~~~~~~~L~~qg~i~ 219 (509)
++.|.+++|+|+|++..++++.||++....+ ..+....++||||||++..+... ..+++++|++||.|.
T Consensus 86 s~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~ 165 (361)
T 1mpp_A 86 GANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLIS 165 (361)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSS
T ss_pred eEEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCC
Confidence 9999999999999999999999999998765 34556678999999998876533 778999999999999
Q ss_pred CceEEEEecCCCCCCCCcEEEECCcCCCCcccceEEEecCCcC----CcEEEEEEeeeEEECCeeeeeecCCceEE-EcC
Q 010486 220 EEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKG----YWQVNKFELGDILIGNQSTGVCEGGCAAI-VDS 294 (509)
Q Consensus 220 ~~~FSl~l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~----~w~~~~v~l~~i~v~~~~~~~~~~~~~~i-iDT 294 (509)
+++||+||.+. ...|.|+|||+|+++|.|+++|+|+.+.. ||. |.+++|+|+++.+. +..+..+| |||
T Consensus 166 ~~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~---v~l~~i~v~~~~~~-~~~~~~ai~iDS 238 (361)
T 1mpp_A 166 SPVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWD---APVTGVKIDGSDAV-SFDGAQAFTIDT 238 (361)
T ss_dssp SSEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEE---EEEEEEEETTEEEE-EEEEEEEEEEET
T ss_pred CcEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEE---EEEeEEEECCeeec-cCCCCEEEEECC
Confidence 99999999885 23899999999999999999999998766 999 99999999998764 34567899 999
Q ss_pred CCcCcccCHHHHHHHHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccc
Q 010486 295 GTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKEN 374 (509)
Q Consensus 295 GTs~i~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (509)
||+++++|++++++|++++++..
T Consensus 239 GTt~~~lP~~~~~~l~~~~~~~~--------------------------------------------------------- 261 (361)
T 1mpp_A 239 GTNFFIAPSSFAEKVVKAALPDA--------------------------------------------------------- 261 (361)
T ss_dssp TCCSEEEEHHHHHHHHHHHCTTC---------------------------------------------------------
T ss_pred CCCceeCCHHHHHHHHHHhCCcc---------------------------------------------------------
Confidence 99999999999999999997640
Q ss_pred cccCCcccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCC-CcEEEEE--C-----CEEE
Q 010486 375 VSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTM-PNVSFTI--G-----DKIF 446 (509)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~-P~l~f~f--g-----g~~~ 446 (509)
+...+.|.++|+...++ |+|+|+| + |+++
T Consensus 262 -------------------------------------------~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~g~~~ 298 (361)
T 1mpp_A 262 -------------------------------------------TESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDV 298 (361)
T ss_dssp -------------------------------------------EEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEEE
T ss_pred -------------------------------------------cCCCCcEEEECCCcccCCCcEEEEEEcCCcCCCCeEE
Confidence 01245788999977788 9999999 8 8999
Q ss_pred EECcccceEeecccccceeeeeeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 447 NLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 447 ~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
+|++++|+++... +...|+++|+.. .++.||||++|||++|+|||++++|||||+++
T Consensus 299 ~i~~~~y~~~~~~-~~~~C~~~i~~~-----~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 355 (361)
T 1mpp_A 299 SVPISKMLLPVDK-SGETCMFIVLPD-----GGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLA 355 (361)
T ss_dssp EEEGGGGEEECSS-SSCEEEESEEEE-----SSSCCEEEHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EECHHHhEEecCC-CCCeeEEEEEeC-----CCCCEEEChHHhccEEEEEECCCCEEEEEEcc
Confidence 9999999998543 345899988864 23579999999999999999999999999985
No 16
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=3.8e-59 Score=475.56 Aligned_cols=311 Identities=33% Similarity=0.617 Sum_probs=272.3
Q ss_pred ecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCc-EEEEEE
Q 010486 79 NFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS-ISGFFS 157 (509)
Q Consensus 79 n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs-~~G~~~ 157 (509)
++.+.+|+++|+||||||+++|++||||+++||+|..|..+ |..++.|+|++|+||+..++.|.++|++|+ +.|.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c--~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~ 88 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC--GSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILA 88 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC--CTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH--hcCCCCCCcccCCCeeeCCCEEEEEECCCCCEEEEEE
Confidence 45788999999999999999999999999999999999743 677899999999999999999999999998 799999
Q ss_pred EEEEEEceEEecCeEEEEEEEeCCccccccceeeEeecccccccc-CCCCchHHHHHHcCCCCCceEEEEecCCCCCCCC
Q 010486 158 QDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV-GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEG 236 (509)
Q Consensus 158 ~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~-~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~ 236 (509)
+|+|++++..++++.||++...++. |.....+||||||++..+. ....+++++|++||+|.+++||+||.+.. ....
T Consensus 89 ~D~v~~g~~~v~~~~fg~~~~~~~~-f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~-~~~~ 166 (325)
T 2apr_A 89 KDNVNLGGLLIKGQTIELAKREAAS-FASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAK-NGGG 166 (325)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECHH-HHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGG-GTCC
T ss_pred EEEEEECCEEECcEEEEEEeccCcc-cccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCC-CCCC
Confidence 9999999999999999999887653 5455589999999988764 35678999999999999999999997642 1238
Q ss_pred cEEEECCcCCCCcccceEEEecC-CcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHHHhCC
Q 010486 237 GEIVFGGVDPKHFKGKHTYVPVT-KKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG 315 (509)
Q Consensus 237 G~L~fGgiD~~~~~g~l~~~pv~-~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~~~~~ 315 (509)
|+|+|||+|+++|.|+++|+|+. ..+||. |.+++|+|++ . ++..+..+||||||+++++|+++++++.+++.+
T Consensus 167 G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~---v~l~~i~vg~-~--~~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~ 240 (325)
T 2apr_A 167 GEYIFGGYDSTKFKGSLTTVPIDNSRGWWG---ITVDRATVGT-S--TVASSFDGILDTGTTLLILPNNIAASVARAYGA 240 (325)
T ss_dssp EEEEETCCCGGGBCSCCEEEECBCTTSSCE---EEECEEEETT-E--EEECCEEEEECTTCSSEEEEHHHHHHHHHHHTC
T ss_pred CEEEEccCCchhccCceEEEEccCCCCEEE---EEEeEEEECC-E--ecCCCceEEEecCCccEECCHHHHHHHHHHHhc
Confidence 99999999999999999999997 478999 9999999999 3 345678999999999999999999999999975
Q ss_pred CcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHHHHHH
Q 010486 316 EGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQN 395 (509)
Q Consensus 316 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (509)
. +
T Consensus 241 ~---------------------------------------~--------------------------------------- 242 (325)
T 2apr_A 241 S---------------------------------------D--------------------------------------- 242 (325)
T ss_dssp E---------------------------------------E---------------------------------------
T ss_pred c---------------------------------------c---------------------------------------
Confidence 4 0
Q ss_pred HhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeeeccCC
Q 010486 396 QLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLP 475 (509)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~ 475 (509)
+. .+.|.+||+. ..+|+|+|+|+|.+++|++++|+++.. ...|+++|+..+
T Consensus 243 ----------------------~~-~g~~~~~C~~-~~~p~i~f~f~g~~~~ip~~~~~~~~~---~~~C~~~i~~~~-- 293 (325)
T 2apr_A 243 ----------------------NG-DGTYTISCDT-SAFKPLVFSINGASFQVSPDSLVFEEF---QGQCIAGFGYGN-- 293 (325)
T ss_dssp ----------------------CS-SSCEEECSCG-GGCCCEEEEETTEEEEECGGGGEEEEE---TTEEEESEEEES--
T ss_pred ----------------------CC-CCeEEEECCC-CCCCcEEEEECCEEEEECHHHEEEcCC---CCeEEEEEEcCC--
Confidence 01 1568899994 248999999988899999999998754 368999887543
Q ss_pred CCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 476 PPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 476 ~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
.+.||||++|||++|+|||++++|||||+++
T Consensus 294 ---~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 294 ---WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp ---SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ---CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 3579999999999999999999999999986
No 17
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=7.3e-59 Score=474.26 Aligned_cols=313 Identities=29% Similarity=0.459 Sum_probs=270.7
Q ss_pred ecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCcee-cCcEEEEEcCCCc-EEEEE
Q 010486 79 NFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTE-IGKSCEINYGSGS-ISGFF 156 (509)
Q Consensus 79 n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~-~~~~~~~~Yg~gs-~~G~~ 156 (509)
.+.+.+|+++|+||||||+++|++||||+++||+|..|. ...|..++.|+|++|+||+. .++.|.++|++|+ +.|.+
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~ 89 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-KSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDV 89 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-ccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEEEEE
Confidence 346889999999999999999999999999999999997 33566789999999999999 6899999999998 79999
Q ss_pred EEEEEEEceEEecCeEEEEEEEeCCccccccceeeEeecccccccc---CCCCchHHHHHHcCCCCCceEEEEecCCCCC
Q 010486 157 SQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDA 233 (509)
Q Consensus 157 ~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~ 233 (509)
++|+|+|++..++++.||++...++..+.....+||||||++..+. ....+++++|+++ |.+++||+||.+.
T Consensus 90 ~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~--- 164 (329)
T 3c9x_A 90 YTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHG--- 164 (329)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSS---
T ss_pred EEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCC---
Confidence 9999999999999999999998765333335789999999987764 3467899999986 8999999999874
Q ss_pred CCCcEEEECCcCCCCcccceEEEecC-CcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHHH
Q 010486 234 EEGGEIVFGGVDPKHFKGKHTYVPVT-KKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHA 312 (509)
Q Consensus 234 ~~~G~L~fGgiD~~~~~g~l~~~pv~-~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~~ 312 (509)
.+|+|+|||+|+++|.|+++|+|+. ..+||. |.+++|+|+++.+ +..+..+||||||+++++|++++++|+++
T Consensus 165 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~---v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lp~~~~~~i~~~ 238 (329)
T 3c9x_A 165 -QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWE---FTASGYSVGGGKL--NRNSIDGIADTGTTLLLLDDNVVDAYYAN 238 (329)
T ss_dssp -SCEEEEESSCCGGGCSSCEEEEECBCTTSSCE---EEECCEEETTCCC--CSCCEEEEECTTCCSEEECHHHHHHHHTT
T ss_pred -CCcEEEEeCcChhhcccceEEEEccCCCceEE---EEEeeEEECCEec--cCCCceEEEECCCCcEeCCHHHHHHHHHh
Confidence 2899999999999999999999997 578999 9999999999865 35678999999999999999999999988
Q ss_pred hCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHHH
Q 010486 313 IGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVW 392 (509)
Q Consensus 313 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (509)
+.+.. +
T Consensus 239 i~~a~--------------------------------------~------------------------------------ 244 (329)
T 3c9x_A 239 VQSAQ--------------------------------------Y------------------------------------ 244 (329)
T ss_dssp CTTCE--------------------------------------E------------------------------------
T ss_pred CCCcE--------------------------------------E------------------------------------
Confidence 85430 0
Q ss_pred HHHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeeec
Q 010486 393 VQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAF 472 (509)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~ 472 (509)
+...+.|.+||+ ..+|+|+|+|+|++++|++++|+++..+.+...|+++|+..
T Consensus 245 -------------------------~~~~~~~~~~C~--~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~ 297 (329)
T 3c9x_A 245 -------------------------DNQQEGVVFDCD--EDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGGLQSS 297 (329)
T ss_dssp -------------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEESEEEC
T ss_pred -------------------------cCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEEEEcC
Confidence 012467899999 47999999999999999999999875433346899988754
Q ss_pred cCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEec
Q 010486 473 DLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 508 (509)
Q Consensus 473 ~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~ 508 (509)
+ ..+.||||++|||++|+|||++++|||||+.
T Consensus 298 ~----~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 298 S----GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp T----TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred C----CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 2 3458999999999999999999999999984
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.2e-58 Score=472.67 Aligned_cols=310 Identities=28% Similarity=0.457 Sum_probs=267.9
Q ss_pred CCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCcee-cCcEEEEEcCCCc-EEEEEEE
Q 010486 81 MDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTE-IGKSCEINYGSGS-ISGFFSQ 158 (509)
Q Consensus 81 ~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~-~~~~~~~~Yg~gs-~~G~~~~ 158 (509)
.+.+|+++|+||||||+++|++||||+++||+|..|. ...| .++.|+|++|+||+. .++.|.++|++|+ +.|.+++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~-~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~~ 90 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEV-XQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVYT 90 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC-cccc-ccCccCCccCccceecCCCeEEEEeCCCCcEEEEEEE
Confidence 5789999999999999999999999999999999997 3355 788999999999998 6899999999998 7999999
Q ss_pred EEEEEceEEecCeEEEEEEEeCCccccccceeeEeecccccccc---CCCCchHHHHHHcCCCCCceEEEEecCCCCCCC
Q 010486 159 DNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEE 235 (509)
Q Consensus 159 D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~ 235 (509)
|+|++++..++++.||++...++..+.....+||||||++..+. ....+++++|+++ |.+++||+||.+. .
T Consensus 91 D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~ 164 (329)
T 1oew_A 91 DTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH----A 164 (329)
T ss_dssp EEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS----S
T ss_pred EEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC----C
Confidence 99999999999999999998765433335789999999987764 3467899999987 8999999999874 2
Q ss_pred CcEEEECCcCCCCcccceEEEecC-CcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHHHhC
Q 010486 236 GGEIVFGGVDPKHFKGKHTYVPVT-KKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 314 (509)
Q Consensus 236 ~G~L~fGgiD~~~~~g~l~~~pv~-~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~~~~ 314 (509)
+|+|+|||+|+++|.|+++|+|+. +.+||. |.+++|+|+++.+. ..+..+||||||+++++|++++++|++++.
T Consensus 165 ~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~---v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~ 239 (329)
T 1oew_A 165 PGTYNFGFIDTTAYTGSITYTAVSTKQGFWE---WTSTGYAVGSGTFK--STSIDGIADTGTTLLYLPATVVSAYWAQVS 239 (329)
T ss_dssp CEEEEESCCCTTSSSSCCEEEECBCTTSSCE---EEEEEEEETTSCCE--EEEEEEEECTTCCSEEECHHHHHHHHTTST
T ss_pred CeEEEEeccChHhcccceEEEEccCCCceEE---EEEeeEEECCeecc--CCCceEEEeCCCCCEECCHHHHHHHHHhCC
Confidence 899999999999999999999997 578999 99999999997653 456789999999999999999999999884
Q ss_pred CCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHHHHH
Q 010486 315 GEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQ 394 (509)
Q Consensus 315 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (509)
+.. +
T Consensus 240 ~a~--------------------------------------~-------------------------------------- 243 (329)
T 1oew_A 240 GAK--------------------------------------S-------------------------------------- 243 (329)
T ss_dssp TCE--------------------------------------E--------------------------------------
T ss_pred CcE--------------------------------------E--------------------------------------
Confidence 430 0
Q ss_pred HHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeeeccC
Q 010486 395 NQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDL 474 (509)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~ 474 (509)
....+.|.+||+ ..+|+|+|+|+|++++|++++|+++....+...|+++|+..+
T Consensus 244 -----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~- 297 (329)
T 1oew_A 244 -----------------------SSSVGGYVFPCS--ATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSA- 297 (329)
T ss_dssp -----------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEEST-
T ss_pred -----------------------cCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEEEEeCC-
Confidence 012467899999 479999999999999999999998754333468999887542
Q ss_pred CCCCCCceEECHhhhcceEEEEeC-CCCeEEEEec
Q 010486 475 PPPRGPLWILGDVFMGVYHTVFDS-GKLRIGFAEA 508 (509)
Q Consensus 475 ~~~~~~~~ilG~~fl~~~y~vfD~-~~~rIGfa~~ 508 (509)
..+.||||++|||++|+|||+ +++|||||++
T Consensus 298 ---~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 298 ---GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp ---TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred ---CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 345899999999999999999 9999999985
No 19
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.2e-57 Score=466.91 Aligned_cols=313 Identities=26% Similarity=0.443 Sum_probs=272.7
Q ss_pred eeEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCC--CCCCcccCCCcccCCCCCCCceecCcEEEEEcCCC
Q 010486 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSK--CYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG 150 (509)
Q Consensus 73 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~--C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~g 150 (509)
..+||.|. +..|+++|+||||||+++|++||||+++||++.. |..+..|..++.|+|++|+||+..++.|.++|++|
T Consensus 3 i~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 81 (339)
T 3fv3_A 3 ISLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDG 81 (339)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTTS
T ss_pred eeeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECCC
Confidence 35788875 6789999999999999999999999999999664 65444899999999999999999999999999999
Q ss_pred -cEEEEEEEEEEEEceEEecCeEEEEEEEeCCccccccceeeEeecccccccc----------CCCCchHHHHHHcCCCC
Q 010486 151 -SISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV----------GDAVPVWDNMVEQGLVS 219 (509)
Q Consensus 151 -s~~G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~----------~~~~~~~~~L~~qg~i~ 219 (509)
.+.|.+++|+|+|++..++++.||++..... .+||||||++..+. ....+++++|++||.|+
T Consensus 82 s~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~ 154 (339)
T 3fv3_A 82 STSQGTWGKDTVTINGVSITGQQIADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIR 154 (339)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCS
T ss_pred ceEEEEEEEEEEEECCEEECceEEEEEEecCC-------CceeEEecCccccccccccccccCccCCcHHHHHHHCCCCC
Confidence 5899999999999999999999999987653 48999999987653 23456999999999999
Q ss_pred CceEEEEecCCCCCCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCc
Q 010486 220 EEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLL 299 (509)
Q Consensus 220 ~~~FSl~l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i 299 (509)
+++||+||.+.. ...|+|+|||+|+++|.|+++|+|+..+.+|. |.+++|.++++.+.. ...++|||||+++
T Consensus 155 ~~~fsl~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~---v~l~~i~v~g~~~~~---~~~~iiDSGtt~~ 226 (339)
T 3fv3_A 155 TNAYSLYLNSPS--AETGTIIFGGVDNAKYSGKLVAEQVTSSQALT---ISLASVNLKGSSFSF---GDGALLDSGTTLT 226 (339)
T ss_dssp SSEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEEBCCSSSCE---EEEEEEEESSCEEEE---EEEEEECTTBSSE
T ss_pred CceEEEEECCCC--CCCeEEEEeeechHHeecceEEEecccCccEE---EEEEEEEECCEeecC---CccEEEeCCCCCE
Confidence 999999998753 23899999999999999999999999999999 999999999988753 3689999999999
Q ss_pred ccCHHHHHHHHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCC
Q 010486 300 AGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGD 379 (509)
Q Consensus 300 ~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (509)
++|++++++|++++++.. +.
T Consensus 227 ~lP~~~~~~i~~~~~~~~---------------------------------------~~--------------------- 246 (339)
T 3fv3_A 227 YFPSDFAAQLADKAGARL---------------------------------------VQ--------------------- 246 (339)
T ss_dssp EECHHHHHHHHHHHTCEE---------------------------------------EE---------------------
T ss_pred ecCHHHHHHHHHHcCCEE---------------------------------------cc---------------------
Confidence 999999999999998650 00
Q ss_pred cccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEE-CCEEEEECcccceEeec
Q 010486 380 SAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTI-GDKIFNLSPEQYILKTG 458 (509)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~f-gg~~~~l~~~~yi~~~~ 458 (509)
.+...+.|.+||+. ..+|+|+|+| +|++++|++++|+++..
T Consensus 247 -------------------------------------~~~~~~~~~~~C~~-~~~p~i~f~f~~g~~~~v~~~~~~~~~~ 288 (339)
T 3fv3_A 247 -------------------------------------VARDQYLYFIDCNT-DTSGTTVFNFGNGAKITVPNTEYVYQNG 288 (339)
T ss_dssp -------------------------------------EETTEEEEEECTTC-CCCSEEEEEETTSCEEEEEGGGGEEECS
T ss_pred -------------------------------------ccccCceEEEecCC-CCCCcEEEEECCCCEEEECHHHheeeCC
Confidence 00124578999996 4689999999 58999999999999753
Q ss_pred ccccceeeeeeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 459 EGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 459 ~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
...|+++|+. .+.||||++|||++|+|||++++|||||+++
T Consensus 289 ---~~~C~~~i~~-------~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 329 (339)
T 3fv3_A 289 ---DGTCLWGIQP-------SDDTILGDNFLRHAYLLYNLDANTISIAQVK 329 (339)
T ss_dssp ---SSCEEESEEE-------CSSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ---CCeEEEEEEe-------CCcEEeChHHHhCEEEEEECCCCEEEEEecC
Confidence 2579998875 2469999999999999999999999999985
No 20
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.8e-57 Score=463.20 Aligned_cols=309 Identities=29% Similarity=0.451 Sum_probs=268.3
Q ss_pred CCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCc-EEEEEEEE
Q 010486 81 MDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS-ISGFFSQD 159 (509)
Q Consensus 81 ~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs-~~G~~~~D 159 (509)
.+.+|+++|+|| ||+++|++||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.++|++|+ +.|.+++|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 87 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-SSEQTGHDLYTPSSSA-TKLSGYSWDISYGDGSSASGDVYRD 87 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-HHHHTTSCCCBCCSSC-EECTTCBEEEECSSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-ccccCCCCCCCchhcC-CccCCCEEEEEeCCCCEEEEEEEEe
Confidence 578999999999 89999999999999999999997 3457788999999999 7778999999999998 79999999
Q ss_pred EEEEceEEecCeEEEEEEEeCCccccccceeeEeecccccccc---CCCCchHHHHHHcCCCCCceEEEEecCCCCCCCC
Q 010486 160 NVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEG 236 (509)
Q Consensus 160 ~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~ 236 (509)
+|++++..++++.||++...++..+....++||||||++..+. ....+++++|+++ +.+++||+||.+. .+
T Consensus 88 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~ 161 (325)
T 1ibq_A 88 TVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSPLFAVQLKHD----AP 161 (325)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEEEETT----EE
T ss_pred EEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCcEEEEEecCC----CC
Confidence 9999999999999999998765433335789999999988765 3567899999987 8999999999874 28
Q ss_pred cEEEECCcCCCCcccceEEEecC-CcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHHHhCC
Q 010486 237 GEIVFGGVDPKHFKGKHTYVPVT-KKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG 315 (509)
Q Consensus 237 G~L~fGgiD~~~~~g~l~~~pv~-~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~~~~~ 315 (509)
|+|+|||+|+++|.|+++|+|+. +.+||. |.+++|+|+++.+ +..+..+||||||+++++|++++++|++++.+
T Consensus 162 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~---v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~ 236 (325)
T 1ibq_A 162 GVYDFGYIDDSKYTGSITYTDADSSQGYWG---FSTDGYSIGDGSS--SSSGFSAIADTGTTLILLDDEIVSAYYEQVSG 236 (325)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCE---EEECEEEETTSCC--BSCCEEEEECTTCCSEEECHHHHHHHHTTSTT
T ss_pred ceEEECCcChhhccCceEEEEcCCCCceEE---EEECcEEECCeec--cCCCceEEEeCCCCcEeCCHHHHHHHHHhCCC
Confidence 99999999999999999999997 578999 9999999999865 35678999999999999999999999998843
Q ss_pred CcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHHHHHH
Q 010486 316 EGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQN 395 (509)
Q Consensus 316 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (509)
.. +
T Consensus 237 a~--------------------------------------~--------------------------------------- 239 (325)
T 1ibq_A 237 AQ--------------------------------------E--------------------------------------- 239 (325)
T ss_dssp CB--------------------------------------C---------------------------------------
T ss_pred ce--------------------------------------E---------------------------------------
Confidence 30 0
Q ss_pred HhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeeeccCC
Q 010486 396 QLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLP 475 (509)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~ 475 (509)
....+.|.+||+ ..+|+|+|+|+|++++|++++|+++..+.+...|+++|+..+
T Consensus 240 ----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~-- 293 (325)
T 1ibq_A 240 ----------------------SYEAGGYVFSCS--TDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSNS-- 293 (325)
T ss_dssp ----------------------CSSSSSCEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEECT--
T ss_pred ----------------------cCcCCeEEEEcC--CCCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEEEcCC--
Confidence 112467889999 479999999999999999999998754323468999887542
Q ss_pred CCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 476 PPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 476 ~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
..+.||||++|||++|+|||++++|||||++|
T Consensus 294 --~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 294 --GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp --TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred --CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 34589999999999999999999999999986
No 21
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2e-57 Score=465.98 Aligned_cols=314 Identities=26% Similarity=0.441 Sum_probs=271.1
Q ss_pred eeEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCC--CCCC------CcccCCCcccCCCCCCCceecCcEEE
Q 010486 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSS--KCYF------SISCYFHSRYKSRKSNTYTEIGKSCE 144 (509)
Q Consensus 73 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~--~C~~------~~~C~~~~~f~~~~SsT~~~~~~~~~ 144 (509)
..+++.| .+.+|+++|+||||||+++|++||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 2qzx_A 3 VAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRFD 81 (342)
T ss_dssp EEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcEE
Confidence 3578888 5789999999999999999999999999999866 6752 24798899999999999999999999
Q ss_pred EEcCCCc-EEEEEEEEEEEEceEEecCeEEEEEEEeCCccccccceeeEeeccccccccC--CCCchHHHHHHcCCCCCc
Q 010486 145 INYGSGS-ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVG--DAVPVWDNMVEQGLVSEE 221 (509)
Q Consensus 145 ~~Yg~gs-~~G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~ 221 (509)
++|++|+ +.|.+++|+|++++..++++.||++.... ..+||||||++..+.. ...+++++|++||.|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (342)
T 2qzx_A 82 IKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKA 154 (342)
T ss_dssp EECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSSS
T ss_pred EEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCcc
Confidence 9999998 68999999999999999999999998653 4589999999876542 345789999999999999
Q ss_pred eEEEEecCCCCCCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCccc
Q 010486 222 VFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAG 301 (509)
Q Consensus 222 ~FSl~l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~l 301 (509)
+||+||.+.. ...|+|+|||+|+++|.|+++|+|+.++.+|. |.+++|+++++.+.. +..+||||||+++++
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~---v~l~~i~v~g~~~~~---~~~aiiDSGTt~~~l 226 (342)
T 2qzx_A 155 AYSLYLNSAE--ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLT---VGLRSVNVRGRNVDA---NTNVLLDSGTTISYF 226 (342)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCE---EEEEEEEETTEEEEE---EEEEEECTTCSSEEE
T ss_pred EEEEEeCCCC--CCCeEEEECccchhhEecceEEEeccCCceEE---EEEeEEEECCEecCC---CcCEEEeCCCCCEEc
Confidence 9999998752 23899999999999999999999999989999 999999999987753 468999999999999
Q ss_pred CHHHHHHHHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcc
Q 010486 302 PTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSA 381 (509)
Q Consensus 302 p~~~~~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (509)
|++++++|++++++... ++
T Consensus 227 P~~~~~~l~~~~~~~~~-------------------------------------~~------------------------ 245 (342)
T 2qzx_A 227 TRSIVRNILYAIGAQMK-------------------------------------FD------------------------ 245 (342)
T ss_dssp CHHHHHHHHHHHTCEEE-------------------------------------EC------------------------
T ss_pred CHHHHHHHHHHhCCeee-------------------------------------ec------------------------
Confidence 99999999999987510 00
Q ss_pred cchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEE-CCEEEEECcccceEeec--
Q 010486 382 VCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTI-GDKIFNLSPEQYILKTG-- 458 (509)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~f-gg~~~~l~~~~yi~~~~-- 458 (509)
+...+.|.+||+ .+|.|+|+| +|++++|++++|+++..
T Consensus 246 ------------------------------------~~~~~~~~~~C~---~~p~i~f~f~~g~~~~i~~~~~~~~~~~~ 286 (342)
T 2qzx_A 246 ------------------------------------SAGNKVYVADCK---TSGTIDFQFGNNLKISVPVSEFLFQTYYT 286 (342)
T ss_dssp ------------------------------------TTSCEEEEECTT---CCCEEEEEETTTEEEEEEGGGGEECCBCT
T ss_pred ------------------------------------cCCCcEEEEECC---CCCcEEEEECCCcEEEEcHHHhccccccc
Confidence 011237899998 489999999 79999999999999753
Q ss_pred -ccccceeeeeeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 459 -EGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 459 -~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
......|+++|+.. +.||||++|||++|+|||++++|||||+++
T Consensus 287 ~~~~~~~C~~~i~~~-------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 2qzx_A 287 SGKPFPKCEVRIRES-------EDNILGDNFLRSAYVVYNLDDKKISMAPVK 331 (342)
T ss_dssp TSCBCSSEEESEEEC-------SSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCCCCccEEEEecC-------CCcEeChHhhhcEEEEEECCCCEEEEEeeC
Confidence 12235899988753 259999999999999999999999999985
No 22
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.2e-57 Score=462.18 Aligned_cols=306 Identities=29% Similarity=0.442 Sum_probs=267.1
Q ss_pred CCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCc-EEEEEEEE
Q 010486 81 MDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS-ISGFFSQD 159 (509)
Q Consensus 81 ~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs-~~G~~~~D 159 (509)
.+.+|+++|+|| ||+++|++||||+++||+|+.|. ...|..++.|+|++|+ ++..++.|.++|++|+ +.|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPGSSA-QKIDGATWSISYGDGSSASGDVYKD 88 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTCCCBCCCTTC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-cccccCCCCCCccccC-CccCCCeEEEEcCCCCeEEEEEEEE
Confidence 578999999999 79999999999999999999997 3467788999999999 7778899999999998 79999999
Q ss_pred EEEEceEEecCeEEEEEEEeCCccccccceeeEeecccccccc---CCCCchHHHHHHcCCCCCceEEEEecCCCCCCCC
Q 010486 160 NVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEG 236 (509)
Q Consensus 160 ~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~ 236 (509)
+|++++.+++++.||++...++..+.....+||||||++..+. ....+++++|+++ +.+++||+||.+. .+
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1izd_A 89 KVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEPIFAVALKHN----AP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEECCTT----SC
T ss_pred EEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCcEEEEEccCC----CC
Confidence 9999999999999999998765333335789999999988775 3567899999987 8999999999874 28
Q ss_pred cEEEECCcCCCCcccceEEEecC-CcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHHHhCC
Q 010486 237 GEIVFGGVDPKHFKGKHTYVPVT-KKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG 315 (509)
Q Consensus 237 G~L~fGgiD~~~~~g~l~~~pv~-~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~~~~~ 315 (509)
|+|+|||+|+++|.|+++|+|+. +.+||. |.+++|+|++ .+ +..+..+||||||+++++|++++++|++++.+
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~---v~l~~i~v~~-~~--~~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~g 236 (323)
T 1izd_A 163 GVYDFGYTDSSKYTGSITYTDVDNSQGFWG---FTADGYSIGS-DS--SSDSITGIADTGTTLLLLDDSIVDAYYEQVNG 236 (323)
T ss_dssp EEEEESSCCTTSEEEEEEEEECBCTTSSCE---EEESEEEETT-EE--ECCCEEEEECTTCCSEEECHHHHHHHHTTSTT
T ss_pred CEEEECCcCccccccceEEEECCCCCceEE---EEECeEEECC-cc--cCCCceEEEeCCCcceeCCHHHHHHHHHhCCC
Confidence 99999999999999999999997 578999 9999999999 43 56788999999999999999999999998854
Q ss_pred CcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHHHHHH
Q 010486 316 EGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQN 395 (509)
Q Consensus 316 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (509)
.. +
T Consensus 237 a~--------------------------------------~--------------------------------------- 239 (323)
T 1izd_A 237 AS--------------------------------------Y--------------------------------------- 239 (323)
T ss_dssp CE--------------------------------------E---------------------------------------
T ss_pred cE--------------------------------------E---------------------------------------
Confidence 30 0
Q ss_pred HhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeeeccCC
Q 010486 396 QLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLP 475 (509)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~ 475 (509)
+...+.|.+||+ ..+|+|+|+|+|++++|++++|+++.. +...|+++|+..+
T Consensus 240 ----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~--~~~~C~~~i~~~~-- 291 (323)
T 1izd_A 240 ----------------------DSSQGGYVFPSS--ASLPDFSVTIGDYTATVPGEYISFADV--GNGQTFGGIQSNS-- 291 (323)
T ss_dssp ----------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEEC--STTEEEESEEECT--
T ss_pred ----------------------cCcCCEEEEECC--CCCceEEEEECCEEEecCHHHeEEecC--CCCeEEEEEEcCC--
Confidence 012467899999 479999999999999999999998753 2468999888643
Q ss_pred CCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 476 PPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 476 ~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
..+.||||++|||++|+|||++++|||||++|
T Consensus 292 --~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 292 --GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp --TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 34589999999999999999999999999986
No 23
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.1e-57 Score=464.37 Aligned_cols=309 Identities=26% Similarity=0.428 Sum_probs=270.4
Q ss_pred eeEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCC--CCCC------CcccCCCcccCCCCCCCceecCcEEE
Q 010486 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSS--KCYF------SISCYFHSRYKSRKSNTYTEIGKSCE 144 (509)
Q Consensus 73 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~--~C~~------~~~C~~~~~f~~~~SsT~~~~~~~~~ 144 (509)
..+||.|. +.+|+++|+||||||+++|++||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 ~~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (334)
T 1j71_A 3 VPTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFS 81 (334)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceE
Confidence 35788886 789999999999999999999999999999976 6752 23798899999999999999999999
Q ss_pred EEcCCCc-EEEEEEEEEEEEceEEecCeEEEEEEEeCCccccccceeeEeeccccccccC--CCCchHHHHHHcCCCCCc
Q 010486 145 INYGSGS-ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVG--DAVPVWDNMVEQGLVSEE 221 (509)
Q Consensus 145 ~~Yg~gs-~~G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~ 221 (509)
++|++|+ +.|.+++|+|++++..++++.||++.... ..+||||||++..+.. ...+++++|++||.|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (334)
T 1j71_A 82 IEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKN 154 (334)
T ss_dssp EEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSS
T ss_pred EEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCcc
Confidence 9999998 68999999999999999999999998653 4589999999876542 456789999999999999
Q ss_pred eEEEEecCCCCCCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCccc
Q 010486 222 VFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAG 301 (509)
Q Consensus 222 ~FSl~l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~l 301 (509)
+||+||.+.. ...|+|+|||+|+++|.|+++|+|+.++.+|. |.+++|+++++.+.. +..+||||||+++++
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~---v~l~~i~v~g~~~~~---~~~~iiDSGTt~~~l 226 (334)
T 1j71_A 155 AYSLYLNSED--ASTGKIIFGGVDNAKYTGTLTALPVTSSVELR---VHLGSINFDGTSVST---NADVVLDSGTTITYF 226 (334)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSEEEEEEEEECCCSSSCE---EEEEEEEETTEEEEE---EEEEEECTTCSSEEE
T ss_pred EEEEEeCCCC--CCCeEEEEeeechHHccCceEEEEccCCCeEE---EEEeEEEECCEeccC---CccEEEeCCCCcEec
Confidence 9999998752 23899999999999999999999999989999 999999999987753 468999999999999
Q ss_pred CHHHHHHHHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcc
Q 010486 302 PTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSA 381 (509)
Q Consensus 302 p~~~~~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (509)
|++++++|++++++..
T Consensus 227 P~~~~~~l~~~~~~~~---------------------------------------------------------------- 242 (334)
T 1j71_A 227 SQSTADKFARIVGATW---------------------------------------------------------------- 242 (334)
T ss_dssp CHHHHHHHHHHHTCEE----------------------------------------------------------------
T ss_pred CHHHHHHHHHHcCCcc----------------------------------------------------------------
Confidence 9999999999998750
Q ss_pred cchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCCceE-ecCCCCCCCCcEEEEE-CCEEEEECcccceEeecc
Q 010486 382 VCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESI-IDCDRIPTMPNVSFTI-GDKIFNLSPEQYILKTGE 459 (509)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~-~~C~~~~~~P~l~f~f-gg~~~~l~~~~yi~~~~~ 459 (509)
+...+.|. ++|+ .+|.|+|+| +|++++|++++|+++..+
T Consensus 243 ------------------------------------~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~i~~~~y~~~~~~ 283 (334)
T 1j71_A 243 ------------------------------------DSRNEIYRLPSCD---LSGDAVFNFDQGVKITVPLSELILKDSD 283 (334)
T ss_dssp ------------------------------------ETTTTEEECSSSC---CCSEEEEEESTTCEEEEEGGGGEEECSS
T ss_pred ------------------------------------cCCCceEEEEcCC---CCCceEEEEcCCcEEEECHHHheeecCC
Confidence 01134677 8998 489999999 799999999999998543
Q ss_pred cccceeeeeeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 460 GIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 460 ~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
+ ..|+++|+.. +.||||++|||++|+|||++++|||||+++
T Consensus 284 ~--~~C~~~i~~~-------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (334)
T 1j71_A 284 S--SICYFGISRN-------DANILGDNFLRRAYIVYDLDDKTISLAQVK 324 (334)
T ss_dssp S--SCEEESEEEC-------TTCEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred C--CeeEEEEeEC-------CCcEEChHhhccEEEEEECCCCEEEEEecC
Confidence 3 3599988753 259999999999999999999999999975
No 24
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=5.7e-57 Score=462.36 Aligned_cols=315 Identities=26% Similarity=0.440 Sum_probs=269.3
Q ss_pred eeEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCC--CC------CCcccCCCcccCCCCCCCceecCcEEE
Q 010486 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSK--CY------FSISCYFHSRYKSRKSNTYTEIGKSCE 144 (509)
Q Consensus 73 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~--C~------~~~~C~~~~~f~~~~SsT~~~~~~~~~ 144 (509)
..+++.+. +.+|+++|+||||||+++|++||||+++||+++. |. ....|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 3pvk_A 3 VPVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFK 81 (342)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred cceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEE
Confidence 35677774 7899999999999999999999999999998764 63 235898899999999999999999999
Q ss_pred EEcCCCc-EEEEEEEEEEEEceEEecCeEEEEEEEeCCccccccceeeEeeccccccccC-CCCchHHHHHHcCCCCCce
Q 010486 145 INYGSGS-ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVG-DAVPVWDNMVEQGLVSEEV 222 (509)
Q Consensus 145 ~~Yg~gs-~~G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~-~~~~~~~~L~~qg~i~~~~ 222 (509)
+.|++|+ +.|.+++|+|+|++..++++.||++.... ..+||||||++..+.. ...+++++|++||.|.+++
T Consensus 82 i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~ 154 (342)
T 3pvk_A 82 IGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNA 154 (342)
T ss_dssp EECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSE
T ss_pred EEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCCCCce
Confidence 9999998 89999999999999999999999998654 4589999999876543 3567899999999999999
Q ss_pred EEEEecCCCCCCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccC
Q 010486 223 FSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGP 302 (509)
Q Consensus 223 FSl~l~~~~~~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp 302 (509)
||+||.+.. ...|+|+|||+|+++|.|+++|+|+..+.+|. |.+++|.++++.+.. .+..++|||||+++++|
T Consensus 155 fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~---v~l~~i~v~g~~~~~--~~~~~iiDSGtt~~~lP 227 (342)
T 3pvk_A 155 YSLYLNSPD--AATGQIIFGGVDNAKYSGSLIALPVTSDRELR---ISLGSVEVSGKTINT--DNVDVLLDSGTTITYLQ 227 (342)
T ss_dssp EEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCE---EEEEEEEETTEEEEE--EEEEEEECTTCSSEEEC
T ss_pred EEEEeCCCC--CCCcEEEECccCccceeeeeEEeecCccceEE---EEEeEEEECCEEecC--CCceEEEeCCCCCeecC
Confidence 999998753 23799999999999999999999999989999 999999999998753 34789999999999999
Q ss_pred HHHHHHHHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCccc
Q 010486 303 TPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAV 382 (509)
Q Consensus 303 ~~~~~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (509)
++++++|++++++...
T Consensus 228 ~~~~~~i~~~~~~~~~---------------------------------------------------------------- 243 (342)
T 3pvk_A 228 QDLADQIIKAFNGKLT---------------------------------------------------------------- 243 (342)
T ss_dssp HHHHHHHHHHTTCEEE----------------------------------------------------------------
T ss_pred HHHHHHHHHHcCCeec----------------------------------------------------------------
Confidence 9999999999987510
Q ss_pred chhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEEC-CEEEEECcccceEeeccc-
Q 010486 383 CSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIG-DKIFNLSPEQYILKTGEG- 460 (509)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fg-g~~~~l~~~~yi~~~~~~- 460 (509)
......+.|.+||+ ..|+|+|+|+ |.+++|++++|+++....
T Consensus 244 ---------------------------------~~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~vp~~~~~~~~~~~~ 287 (342)
T 3pvk_A 244 ---------------------------------QDSNGNSFYEVDCN---LSGDVVFNFSKNAKISVPASEFAASLQGDD 287 (342)
T ss_dssp ---------------------------------ECTTSCEEEEECSC---CCSEEEEEESTTCEEEEEGGGGEEC-----
T ss_pred ---------------------------------ccCCCceEEEEecC---CCCceEEEECCCCEEEEcHHHheeeccccC
Confidence 00011335899999 4699999996 899999999999974321
Q ss_pred --ccceeeeeeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 461 --IAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 461 --~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
....|+++|... +.||||++|||++|+|||++++|||||+++
T Consensus 288 g~~~~~C~~~i~~~-------~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 3pvk_A 288 GQPYDKCQLLFDVN-------DANILGDNFLRSAYIVYDLDDNEISLAQVK 331 (342)
T ss_dssp -----CEEESEEEC-------TTCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCcCCeeEEEEeeC-------CCeEeCHHHHhcEEEEEECCCCEEEEEecC
Confidence 126799988752 479999999999999999999999999985
No 25
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.7e-57 Score=463.05 Aligned_cols=306 Identities=27% Similarity=0.450 Sum_probs=265.7
Q ss_pred CCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCc-EEEEEEEE
Q 010486 81 MDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS-ISGFFSQD 159 (509)
Q Consensus 81 ~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs-~~G~~~~D 159 (509)
.+.+|+++|+|| ||+++|++||||+++||+|+.|. ...|..++.|+|++|+ ++..++.|.++|++|+ +.|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATG-KELSGYTWSISYGDGSSASGNVFTD 88 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-chhccCCCCCCcccCC-cccCCCeEEEEeCCCCeEEEEEEEE
Confidence 578999999999 89999999999999999999997 3457788999999999 8778899999999998 79999999
Q ss_pred EEEEceEEecCeEEEEEEEeCCccccccceeeEeecccccccc---CCCCchHHHHHHcCCCCCceEEEEecCCCCCCCC
Q 010486 160 NVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV---GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEG 236 (509)
Q Consensus 160 ~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~ 236 (509)
+|++++..++++.||++...++..+.....+||||||++..+. ....+++++|+++ |.+++||+||.+. .+
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1bxo_A 89 SVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALKHQ----QP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSSEEEEECCSS----SC
T ss_pred EEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCcEEEEEEeCC----CC
Confidence 9999999999999999998765333335789999999988765 2467899999987 8999999999874 28
Q ss_pred cEEEECCcCCCCcccceEEEecC-CcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHHHhCC
Q 010486 237 GEIVFGGVDPKHFKGKHTYVPVT-KKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGG 315 (509)
Q Consensus 237 G~L~fGgiD~~~~~g~l~~~pv~-~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~~~~~ 315 (509)
|+|+|||+|+++|+|+++|+|+. +.+||. |.+++|+|++ + +..+..+||||||+++++|++++++|++++.+
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~---v~l~~i~v~~--~--~~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~ 235 (323)
T 1bxo_A 163 GVYDFGFIDSSKYTGSLTYTGVDNSQGFWS---FNVDSYTAGS--Q--SGDGFSGIADTGTTLLLLDDSVVSQYYSQVSG 235 (323)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCE---EEEEEEEETT--E--EEEEEEEEECTTCSSEEECHHHHHHHHTTSTT
T ss_pred ceEEEeCcChhhccCceEEEECCCCCCeEE---EEEeeEEECC--c--cCCCceEEEeCCCCceeCCHHHHHHHHHhCCC
Confidence 99999999999999999999996 578999 9999999999 2 34567999999999999999999999998844
Q ss_pred CcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHHHHHH
Q 010486 316 EGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQN 395 (509)
Q Consensus 316 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (509)
.. +
T Consensus 236 a~--------------------------------------~--------------------------------------- 238 (323)
T 1bxo_A 236 AQ--------------------------------------Q--------------------------------------- 238 (323)
T ss_dssp CE--------------------------------------E---------------------------------------
T ss_pred ce--------------------------------------E---------------------------------------
Confidence 30 0
Q ss_pred HhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeeeccCC
Q 010486 396 QLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLP 475 (509)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~ 475 (509)
+...+.|.+||+ ..+|+|+|+|+|++++|++++|+++... +...|+++|+..+
T Consensus 239 ----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~l~~~~~~~~~~~-~~~~C~~~i~~~~-- 291 (323)
T 1bxo_A 239 ----------------------DSNAGGYVFDCS--TNLPDFSVSISGYTATVPGSLINYGPSG-DGSTCLGGIQSNS-- 291 (323)
T ss_dssp ----------------------ETTTTEEEECTT--CCCCCEEEEETTEEEEECHHHHEEEECS-SSSCEEESEEECT--
T ss_pred ----------------------cCcCCEEEEECC--CCCceEEEEECCEEEEECHHHeEEeccC-CCCeEEEEEECCC--
Confidence 012467899999 4799999999999999999999987532 3368999888643
Q ss_pred CCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 476 PPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 476 ~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
..+.||||++|||++|+|||++++|||||++|
T Consensus 292 --~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 292 --GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp --TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred --CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 34589999999999999999999999999986
No 26
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2.1e-56 Score=457.96 Aligned_cols=312 Identities=27% Similarity=0.478 Sum_probs=266.0
Q ss_pred eeEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCcE
Q 010486 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSI 152 (509)
Q Consensus 73 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~ 152 (509)
..+||.|+ +..|+++|+||||||+++|+|||||+++||+|. +.|+|++|++ ..++.|.++|++|++
T Consensus 3 ~~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~--~~~~~~~i~Yg~Gs~ 68 (340)
T 1wkr_A 3 GSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSS--ATSDKVSVTYGSGSF 68 (340)
T ss_dssp EEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCE--EEEEEEEEECSSCEE
T ss_pred ccEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCcc--ccCceEEEEECCcEE
Confidence 46899997 569999999999999999999999999999753 4789887774 457899999999999
Q ss_pred EEEEEEEEEEEceEEecCeEEEEEEEeCCccccccceeeEeecccccccc--------CCCCchHHHHHHcCCCCCceEE
Q 010486 153 SGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV--------GDAVPVWDNMVEQGLVSEEVFS 224 (509)
Q Consensus 153 ~G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~--------~~~~~~~~~L~~qg~i~~~~FS 224 (509)
.|.+++|+|+||+..++++.|||+....+ + ..++||||||++..+. ....+++++|++||+|++++||
T Consensus 69 ~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~--~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS 144 (340)
T 1wkr_A 69 SGTEYTDTVTLGSLTIPKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLA 144 (340)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEES--C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEE
T ss_pred EEEEEEEEEEECCEEEcceEEEEEEccCC--C--cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEE
Confidence 99999999999999999999999998654 3 3579999999988765 3467899999999999999999
Q ss_pred EEecCCC-CCCCCcEEEECCcCCCCcccceEEEecCC----cCCcEEEEEEeeeEEECC-eeeeeecCCceEEEcCCCcC
Q 010486 225 FWLNRDP-DAEEGGEIVFGGVDPKHFKGKHTYVPVTK----KGYWQVNKFELGDILIGN-QSTGVCEGGCAAIVDSGTSL 298 (509)
Q Consensus 225 l~l~~~~-~~~~~G~L~fGgiD~~~~~g~l~~~pv~~----~~~w~~~~v~l~~i~v~~-~~~~~~~~~~~~iiDTGTs~ 298 (509)
+||.+.. +....|+|+|||+|+++|.|+++|+|+.+ .+||. |. ++|.+++ +.+. .+..+||||||++
T Consensus 145 ~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~---v~-~~i~v~~~~~l~---~~~~aiiDSGTt~ 217 (340)
T 1wkr_A 145 VSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWG---IN-QSIRYGSSTSIL---SSTAGIVDTGTTL 217 (340)
T ss_dssp EECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSE---EE-EEEEETTTEEEE---EEEEEEECTTBCS
T ss_pred EEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEE---EE-eeEEECCCeEcc---CCCeEEEeCCccc
Confidence 9998742 12247999999999999999999999987 68999 99 9999998 7653 2458999999999
Q ss_pred cccCHHHHHHHHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccC
Q 010486 299 LAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAG 378 (509)
Q Consensus 299 i~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (509)
+++|++++++|.+++++. +
T Consensus 218 ~~lP~~~~~~l~~~~~a~---------------------------------------~---------------------- 236 (340)
T 1wkr_A 218 TLIASDAFAKYKKATGAV---------------------------------------A---------------------- 236 (340)
T ss_dssp EEECHHHHHHHHHHHTCE---------------------------------------E----------------------
T ss_pred ccCCHHHHHHHHHhhCCE---------------------------------------E----------------------
Confidence 999999999999988764 1
Q ss_pred CcccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeec
Q 010486 379 DSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTG 458 (509)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~ 458 (509)
....+.|.+||+....+|+|+|+|+|++++|+|++|+++..
T Consensus 237 ---------------------------------------~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~~yi~~~~ 277 (340)
T 1wkr_A 237 ---------------------------------------DNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPRN 277 (340)
T ss_dssp ---------------------------------------CTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCGG
T ss_pred ---------------------------------------cCCCCeEEeeccccccCCcEEEEECCEEEEEcHHHhccccc
Confidence 11246789999876689999999999999999999998754
Q ss_pred c-----cccceeeeeeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 459 E-----GIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 459 ~-----~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
. +....|+++|..++.....++.||||++|||++|+|||++++|||||+++
T Consensus 278 ~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 333 (340)
T 1wkr_A 278 LNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTS 333 (340)
T ss_dssp GGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECT
T ss_pred cccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecC
Confidence 2 12357998888765433344579999999999999999999999999975
No 27
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.6e-55 Score=468.56 Aligned_cols=326 Identities=27% Similarity=0.422 Sum_probs=263.8
Q ss_pred eceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCcEEEE
Q 010486 76 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGF 155 (509)
Q Consensus 76 ~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~G~ 155 (509)
+|.+..+..|+++|+||||||+++|+|||||+++||+|..| |..++.|+|++|+||+..++.|.++|++|++.|.
T Consensus 67 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-----c~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 141 (455)
T 3lpj_A 67 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 141 (455)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred cccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc-----cccCCcccCCCCCCcccCCccEEEEeCCeEEEEE
Confidence 45556678999999999999999999999999999999877 6678999999999999999999999999999999
Q ss_pred EEEEEEEEce-EEec-CeEEEEEEEeCCccccccceeeEeeccccccccC--CCCchHHHHHHcCCCCCceEEEEecCCC
Q 010486 156 FSQDNVEVGD-VVVK-DQVFIEATREGSLTFLLARFDGIIGLGFREIAVG--DAVPVWDNMVEQGLVSEEVFSFWLNRDP 231 (509)
Q Consensus 156 ~~~D~v~~gg-~~~~-~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~~FSl~l~~~~ 231 (509)
+++|+|+|++ ..+. .+.|+++............++||||||++..+.. ...+++++|++|+.|+ ++||+||.+..
T Consensus 142 ~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~L~~~~ 220 (455)
T 3lpj_A 142 LGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAG 220 (455)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCS
T ss_pred EEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ceeEEEecccc
Confidence 9999999984 3222 2567877765543223467899999999988764 3789999999999997 99999997631
Q ss_pred C--------CCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeec---CCceEEEcCCCcCcc
Q 010486 232 D--------AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCE---GGCAAIVDSGTSLLA 300 (509)
Q Consensus 232 ~--------~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~---~~~~~iiDTGTs~i~ 300 (509)
. ...+|+|+|||+|+++|.|+++|+|+.+..||. |.+++|.|+++.+.+.. ++..+||||||++++
T Consensus 221 ~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~---v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~ 297 (455)
T 3lpj_A 221 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYE---VIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLR 297 (455)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBB---CCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEE
T ss_pred ccccccccccCCCceEEECCcCcccccCceEEEecCCCceeE---EEEeEEEECCEEccccccccCCCeEEEECCCccee
Confidence 1 234899999999999999999999999999999 99999999999876432 256899999999999
Q ss_pred cCHHHHHHHHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCc
Q 010486 301 GPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDS 380 (509)
Q Consensus 301 lp~~~~~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (509)
+|.+++++|++++++... ...+.+
T Consensus 298 lP~~~~~~i~~~i~~~~~--------~~~~~~------------------------------------------------ 321 (455)
T 3lpj_A 298 LPKKVFEAAVKSIKAASS--------TEKFPD------------------------------------------------ 321 (455)
T ss_dssp EEHHHHHHHHHHHHHHTT--------TSCCCH------------------------------------------------
T ss_pred CCHHHHHHHHHHhhhhcc--------ccccCc------------------------------------------------
Confidence 999999999999976410 000000
Q ss_pred ccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCCC-----CCcEEEEECCE------EEEEC
Q 010486 381 AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPT-----MPNVSFTIGDK------IFNLS 449 (509)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~-----~P~l~f~fgg~------~~~l~ 449 (509)
.....|.++|+.... +|+|+|+|+|. +++|+
T Consensus 322 --------------------------------------~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~ 363 (455)
T 3lpj_A 322 --------------------------------------GFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITIL 363 (455)
T ss_dssp --------------------------------------HHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEEC
T ss_pred --------------------------------------ccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEEEC
Confidence 001223567876554 89999999765 59999
Q ss_pred cccceEeecccc--cceeeeeeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 450 PEQYILKTGEGI--AEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 450 ~~~yi~~~~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
|++|+++..+.+ ...|++ |... ...+.||||++|||++|+|||++++|||||+++
T Consensus 364 ~~~yi~~~~~~~~~~~~C~~-f~~~----~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 420 (455)
T 3lpj_A 364 PQQYLRPVEDVATSQDDCYK-FAIS----QSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 420 (455)
T ss_dssp HHHHEEEECCTTCCSCEEEE-ECEE----EESSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred HHHheEeccCCCCCCceEEE-Eecc----CCCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 999999865432 247996 3211 123579999999999999999999999999974
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1e-54 Score=452.46 Aligned_cols=324 Identities=26% Similarity=0.453 Sum_probs=259.8
Q ss_pred eceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCcEEEE
Q 010486 76 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGF 155 (509)
Q Consensus 76 ~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~G~ 155 (509)
+|.+..+..|+++|+||||||+++|+|||||+++||+|..|. .| ++.|+|++|+||+..++.|.++|++|++.|.
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~---~~--~~~f~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 80 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS---YI--DTYFDTERSSTYRSKGFDVTVKYTQGSWTGF 80 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT---TB--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred eccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC---cc--ccCcccccCccceeCCceEEEEECCcEEEEE
Confidence 677777889999999999999999999999999999999885 44 6789999999999999999999999999999
Q ss_pred EEEEEEEEceEE-ec-CeEEEEEEEeCCccccccceeeEeecccccccc--CCCCchHHHHHHcCCCCCceEEEEecCC-
Q 010486 156 FSQDNVEVGDVV-VK-DQVFIEATREGSLTFLLARFDGIIGLGFREIAV--GDAVPVWDNMVEQGLVSEEVFSFWLNRD- 230 (509)
Q Consensus 156 ~~~D~v~~gg~~-~~-~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~--~~~~~~~~~L~~qg~i~~~~FSl~l~~~- 230 (509)
+++|+|+|++.. .. .+.|++.....+.......++||||||++..+. ....+++++|++|+.+ +++||+||.+.
T Consensus 81 ~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~FS~~l~~~~ 159 (383)
T 2ewy_A 81 VGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNVFSMQMCGAG 159 (383)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSCEEEEECCC-
T ss_pred EEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-CcceEEEeeccc
Confidence 999999998532 22 356777654433211235679999999998765 4577899999999999 79999999752
Q ss_pred ----CCCCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecC---CceEEEcCCCcCcccCH
Q 010486 231 ----PDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEG---GCAAIVDSGTSLLAGPT 303 (509)
Q Consensus 231 ----~~~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~---~~~~iiDTGTs~i~lp~ 303 (509)
.....+|+|+|||+|+++|.|+++|+|+.++.||. |.+++|+|+++.+.+... ...+||||||+++++|+
T Consensus 160 ~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~---v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~ 236 (383)
T 2ewy_A 160 LPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQ---IEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQ 236 (383)
T ss_dssp --------CCEEEEETSCCGGGCCSCEEEEECSSBTTBB---CCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEH
T ss_pred cccccCCCCCeEEEeCccchhhccCccEEEecCCCceEE---EEEEEEEECCEEccccccccCCccEEEEcCCccccCCH
Confidence 11234899999999999999999999999999999 999999999988764322 46899999999999999
Q ss_pred HHHHHHHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccc
Q 010486 304 PVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVC 383 (509)
Q Consensus 304 ~~~~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (509)
+++++|++++++.... .
T Consensus 237 ~~~~~l~~~i~~~~~~---------------------------------------~------------------------ 253 (383)
T 2ewy_A 237 KVFDAVVEAVARASLI---------------------------------------P------------------------ 253 (383)
T ss_dssp HHHHHHHHHHHHTTCS---------------------------------------S------------------------
T ss_pred HHHHHHHHHHhhhccc---------------------------------------c------------------------
Confidence 9999999999765100 0
Q ss_pred hhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCC-CCceEecCCCCC-----CCCcEEEEECC------EEEEECcc
Q 010486 384 SACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNP-MGESIIDCDRIP-----TMPNVSFTIGD------KIFNLSPE 451 (509)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~~~~~~C~~~~-----~~P~l~f~fgg------~~~~l~~~ 451 (509)
..+.. ...+.++|.... .+|+|+|+|+| .+++|+|+
T Consensus 254 --------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~ 301 (383)
T 2ewy_A 254 --------------------------------EFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQ 301 (383)
T ss_dssp --------------------------------CCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEECHH
T ss_pred --------------------------------cCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEEChH
Confidence 00000 012456776542 58999999965 37999999
Q ss_pred cceEeecc-cccceeee-eeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 452 QYILKTGE-GIAEVCIS-GFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 452 ~yi~~~~~-~~~~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
+|+++..+ +....|+. ++... .+.||||++|||++|+|||++++|||||+++
T Consensus 302 ~yi~~~~~~~~~~~C~~~~i~~~------~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 355 (383)
T 2ewy_A 302 LYIQPMMGAGLNYECYRFGISPS------TNALVIGATVMEGFYVIFDRAQKRVGFAASP 355 (383)
T ss_dssp HHEEEECCCTTCSEEEEESEEEE------SSCEEECHHHHTTEEEEEETTTTEEEEEECT
T ss_pred HheeecccCCCCceeEEEEecCC------CCcEEEChHHhCCeeEEEECCCCeEEEEecc
Confidence 99997642 22357985 44421 2479999999999999999999999999974
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=3.2e-54 Score=451.60 Aligned_cols=323 Identities=27% Similarity=0.433 Sum_probs=259.7
Q ss_pred ceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCcEEEEE
Q 010486 77 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFF 156 (509)
Q Consensus 77 l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~G~~ 156 (509)
|....+..|+++|+||||||+++|+|||||+++||+|..| |..++.|+|++|+||+..++.|.++|++|++.|.+
T Consensus 22 l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c-----~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~ 96 (402)
T 3vf3_A 22 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGEL 96 (402)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEEE
T ss_pred ccCCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC-----CcccCCcCcccCcccccCCCEEEEEECcEEEEEEE
Confidence 4444567899999999999999999999999999999887 56688999999999999999999999999999999
Q ss_pred EEEEEEEc-eEEecC-eEEEEEEEeCCccccccceeeEeeccccccccCC--CCchHHHHHHcCCCCCceEEEEecCCC-
Q 010486 157 SQDNVEVG-DVVVKD-QVFIEATREGSLTFLLARFDGIIGLGFREIAVGD--AVPVWDNMVEQGLVSEEVFSFWLNRDP- 231 (509)
Q Consensus 157 ~~D~v~~g-g~~~~~-~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~--~~~~~~~L~~qg~i~~~~FSl~l~~~~- 231 (509)
++|+|+|+ +..+.. +.|+++....+.......++||||||++..+... ..+++++|++|+.|+ ++||+||.+..
T Consensus 97 ~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~l~~~~~ 175 (402)
T 3vf3_A 97 GTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAGF 175 (402)
T ss_dssp EEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCC-
T ss_pred EEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cceEEEeecccc
Confidence 99999998 444443 3467666554422234578999999999887643 788999999999997 99999997531
Q ss_pred ----C---CCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeec---CCceEEEcCCCcCccc
Q 010486 232 ----D---AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCE---GGCAAIVDSGTSLLAG 301 (509)
Q Consensus 232 ----~---~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~---~~~~~iiDTGTs~i~l 301 (509)
. ...+|+|+|||+|+++|.|+++|+|+.+..||. |.+++|+|+++.+.+.. +...+||||||+++++
T Consensus 176 ~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~---v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~l 252 (402)
T 3vf3_A 176 PLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYE---VIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRL 252 (402)
T ss_dssp ------------EEEEESSCCGGGEEEEEEEEECSSBTTBE---ECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEE
T ss_pred cccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEE---EEEeEEEECCEEecccccccCCCeEEEECCCCcccC
Confidence 0 234899999999999999999999999999999 99999999999876432 2568999999999999
Q ss_pred CHHHHHHHHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcc
Q 010486 302 PTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSA 381 (509)
Q Consensus 302 p~~~~~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (509)
|.+++++|++++++... .
T Consensus 253 P~~~~~~i~~~i~~~~~--------~------------------------------------------------------ 270 (402)
T 3vf3_A 253 PKKVFEAAVKSIKAASS--------T------------------------------------------------------ 270 (402)
T ss_dssp EHHHHHHHHHHHHHHTT--------T------------------------------------------------------
T ss_pred CHHHHHHHHHHHhhhcc--------c------------------------------------------------------
Confidence 99999999999976410 0
Q ss_pred cchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCC-CCCceEecCCCCC-----CCCcEEEEECCE------EEEEC
Q 010486 382 VCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPN-PMGESIIDCDRIP-----TMPNVSFTIGDK------IFNLS 449 (509)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~-~~~~~~~~C~~~~-----~~P~l~f~fgg~------~~~l~ 449 (509)
...+. ....|.++|+... .+|+|+|+|+|. +++|+
T Consensus 271 ---------------------------------~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~ 317 (402)
T 3vf3_A 271 ---------------------------------EKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITIL 317 (402)
T ss_dssp ---------------------------------SCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEEC
T ss_pred ---------------------------------cccCccccccccccccccccchHhhCCceEEEEecCCCCceEEEEEC
Confidence 00000 0112356887654 589999999764 59999
Q ss_pred cccceEeeccccc--ceeee-eeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 450 PEQYILKTGEGIA--EVCIS-GFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 450 ~~~yi~~~~~~~~--~~C~~-~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
|++|+++..+... ..|++ ++.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 318 ~~~yi~~~~~~~~~~~~C~~~~~~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 374 (402)
T 3vf3_A 318 PQQYLRPVEDVATSQDDCYKFAISQ------SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 374 (402)
T ss_dssp HHHHEEECCCGGGTTEEEEEECEEE------ESSCEEECHHHHTTEEEEEEGGGTEEEEEEET
T ss_pred HHHheehhccCCCCCceEEEEeccC------CCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 9999998654322 47995 3332 23579999999999999999999999999975
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=6.6e-54 Score=448.27 Aligned_cols=324 Identities=27% Similarity=0.420 Sum_probs=259.2
Q ss_pred eceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCcEEEE
Q 010486 76 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGF 155 (509)
Q Consensus 76 ~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs~~G~ 155 (509)
+|.+..+..|+++|+||||||+++|+|||||+++||+|..|. .| ++.|++++|+||+..++.|.++|++|++.|.
T Consensus 14 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~---~~--~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 88 (395)
T 2qp8_A 14 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP---FL--HRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 88 (395)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT---TC--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred ecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc---cc--cCCcCcccCCCceeCCceEEEEECCcEEEEE
Confidence 555666889999999999999999999999999999999885 33 6889999999999999999999999999999
Q ss_pred EEEEEEEEc-eEEec-CeEEEEEEEeCCcccc-ccceeeEeeccccccccC--CCCchHHHHHHcCCCCCceEEEEecCC
Q 010486 156 FSQDNVEVG-DVVVK-DQVFIEATREGSLTFL-LARFDGIIGLGFREIAVG--DAVPVWDNMVEQGLVSEEVFSFWLNRD 230 (509)
Q Consensus 156 ~~~D~v~~g-g~~~~-~~~fg~a~~~~~~~~~-~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~~FSl~l~~~ 230 (509)
+++|+|+++ +..+. .+.|++.....+ .|. ...++||||||++..+.. ...+++++|++|+.|+ ++||+||.+.
T Consensus 89 ~~~Dtv~ig~g~~~~~~~~~~~~~~~~~-~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~FS~~L~~~ 166 (395)
T 2qp8_A 89 LGTDLVSIPHGPNVTVRANIAAITESDK-FFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGA 166 (395)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCC
T ss_pred EEeEEEEECCCCCceEEEEEEEEEccCc-ccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ceEEEEeccc
Confidence 999999998 55443 256776654433 232 356799999999887653 5678999999999997 8999999863
Q ss_pred CC--------CCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeec---CCceEEEcCCCcCc
Q 010486 231 PD--------AEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCE---GGCAAIVDSGTSLL 299 (509)
Q Consensus 231 ~~--------~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~---~~~~~iiDTGTs~i 299 (509)
.- ...+|+|+|||+|+++|.|+++|+|+.+..||. |.+++|+|+++.+.+.. ....+||||||+++
T Consensus 167 ~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~---v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~ 243 (395)
T 2qp8_A 167 GFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYE---VIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNL 243 (395)
T ss_dssp SSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBB---CCEEEEEETTEECCCCGGGGGSSCEEECTTCCSE
T ss_pred cccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEE---EEEEEEEECCEEcccCccccCCceEEEEcCCCcE
Confidence 10 124899999999999999999999999999999 99999999998875432 24689999999999
Q ss_pred ccCHHHHHHHHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCC
Q 010486 300 AGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGD 379 (509)
Q Consensus 300 ~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (509)
++|++++++|++++++.... ..+..
T Consensus 244 ~lP~~~~~~l~~~i~~~~~~--------~~~~~----------------------------------------------- 268 (395)
T 2qp8_A 244 RLPKKVFEAAVKSIKAASST--------EKFPD----------------------------------------------- 268 (395)
T ss_dssp EEEHHHHHHHHHHHHHHTTT--------SCCCH-----------------------------------------------
T ss_pred ecCHHHHHHHHHHHhhhccc--------ccCCc-----------------------------------------------
Confidence 99999999999999654100 00000
Q ss_pred cccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCCC-----CCCcEEEEECCE------EEEE
Q 010486 380 SAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIP-----TMPNVSFTIGDK------IFNL 448 (509)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~-----~~P~l~f~fgg~------~~~l 448 (509)
. + ...+.++|.... .+|+|+|+|+|. +++|
T Consensus 269 -------------------------~---~-----------~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l 309 (395)
T 2qp8_A 269 -------------------------G---F-----------WLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITI 309 (395)
T ss_dssp -------------------------H---H-----------HTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEE
T ss_pred -------------------------c---c-----------cccccccccccccchHhhCCcEEEEEccCCCCceEEEEE
Confidence 0 0 011245666543 489999999653 7999
Q ss_pred CcccceEeecc--cccceee-eeeeeccCCCCCCCceEECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 449 SPEQYILKTGE--GIAEVCI-SGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 449 ~~~~yi~~~~~--~~~~~C~-~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
+|++|+++..+ .....|+ .+++.. ++.||||++|||++|+|||++++|||||+++
T Consensus 310 ~p~~yi~~~~~~~~~~~~C~~~~i~~~------~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 367 (395)
T 2qp8_A 310 LPQQYLRPVEDVATSQDDCYKFAISQS------STGTVMGAVIMEGFYVVFDRARKRIGFAVSA 367 (395)
T ss_dssp CHHHHEEEECCTTCCSCEEEEECEEEE------SSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred CHHHhEeecccCCCCCceEEEEEecCC------CCcEEEChHHhCCeeEEEECCCCEEEEEecc
Confidence 99999998653 2335897 456532 2479999999999999999999999999974
No 31
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=5.9e-53 Score=442.16 Aligned_cols=325 Identities=17% Similarity=0.273 Sum_probs=256.1
Q ss_pred ceeEece-ecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCC-----------CCCCCcccCCCccc------CCCCC
Q 010486 72 EDILPLK-NFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSS-----------KCYFSISCYFHSRY------KSRKS 133 (509)
Q Consensus 72 ~~~~~l~-n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~-----------~C~~~~~C~~~~~f------~~~~S 133 (509)
...+||+ |+.+.+|+++|+||||||++.|+|||||+++||+|. .|. +..|..++.| ++..|
T Consensus 9 ~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~-s~~C~~~~~~~c~~c~~~~~s 87 (403)
T 3aup_A 9 LVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH-STQCSRANTHQCLSCPAASRP 87 (403)
T ss_dssp CEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTT-BHHHHHTTCCCEEECSSSCBT
T ss_pred cEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCC-CccccCccccCccccCCCCCC
Confidence 3468999 788999999999999999999999999999999999 664 4568877777 55544
Q ss_pred CCceecCcEEEEEcC-CCc-EEEEEEEEEEEEce-----------EEecCeEEEEEEEeCCccccccceeeEeecccccc
Q 010486 134 NTYTEIGKSCEINYG-SGS-ISGFFSQDNVEVGD-----------VVVKDQVFIEATREGSLTFLLARFDGIIGLGFREI 200 (509)
Q Consensus 134 sT~~~~~~~~~~~Yg-~gs-~~G~~~~D~v~~gg-----------~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~ 200 (509)
++....|.|.+.|+ +|+ +.|.+++|+|+|++ +.++++.|||+.......+.....+||||||+...
T Consensus 88 -~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 166 (403)
T 3aup_A 88 -GCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPI 166 (403)
T ss_dssp -TBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTT
T ss_pred -CCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCc
Confidence 35556789999998 554 79999999999998 88999999999875432233567899999999865
Q ss_pred ccCCCCchHHHHHHcCCCCCceEEEEecCCCCCCCCcEEEECCcCCCCc--c-c-----ceEEEecCCc--CCcEEEEEE
Q 010486 201 AVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHF--K-G-----KHTYVPVTKK--GYWQVNKFE 270 (509)
Q Consensus 201 s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGgiD~~~~--~-g-----~l~~~pv~~~--~~w~~~~v~ 270 (509)
+ +..+|. ++.+.+++||+||.+.. ..+|.|+||| |+++| . | ++.|+|+..+ +||. |.
T Consensus 167 s------~~~ql~-~~~~~~~~FS~~L~~~~--~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~---v~ 233 (403)
T 3aup_A 167 S------LPNQLA-SHFGLQRQFTTCLSRYP--TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYN---VR 233 (403)
T ss_dssp S------HHHHHH-HHHTCCSEEEEECCSCT--TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEE---EC
T ss_pred C------HHHHHH-hhcCCCCeEEEEcCCCC--CCCeeEEECC-CchhccccccccccCceeecccccCCCCcce---EE
Confidence 4 455664 55577899999998752 2389999999 99888 5 6 9999999876 8999 99
Q ss_pred eeeEEECCeee-eeecC--------CceEEEcCCCcCcccCHHHHHHHHHHhCCCcceecceeehhhccchhhHHHHhhC
Q 010486 271 LGDILIGNQST-GVCEG--------GCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSG 341 (509)
Q Consensus 271 l~~i~v~~~~~-~~~~~--------~~~~iiDTGTs~i~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 341 (509)
+++|+|+++.+ .+... ...+||||||+++++|++++++|++++.++. ..+
T Consensus 234 l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~----------~~~----------- 292 (403)
T 3aup_A 234 VNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQL----------PKQ----------- 292 (403)
T ss_dssp EEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTS----------CGG-----------
T ss_pred EEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHh----------ccc-----------
Confidence 99999999877 43221 3459999999999999999999999995430 000
Q ss_pred CCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCC
Q 010486 342 LLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPM 421 (509)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 421 (509)
+ .. .+...
T Consensus 293 -------------------------~--------------------------------------------~~---~~~~~ 300 (403)
T 3aup_A 293 -------------------------A--------------------------------------------QV---KSVAP 300 (403)
T ss_dssp -------------------------G--------------------------------------------EE---CCCTT
T ss_pred -------------------------c--------------------------------------------cc---CCCCC
Confidence 0 00 00112
Q ss_pred CceEecCCCCCCCCcEEEEECC---EEEEECcccceEeecccccceeeeeeeeccCCCCCCCceEECHhhhcceEEEEeC
Q 010486 422 GESIIDCDRIPTMPNVSFTIGD---KIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDS 498 (509)
Q Consensus 422 ~~~~~~C~~~~~~P~l~f~fgg---~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~ 498 (509)
..|.++|+.+..+|+|+|+|+| ++++|++++|+++..+ ...|+ +|+..+. +..+.||||+.|||++|+|||+
T Consensus 301 ~~~c~~c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~-~~~~~~~--~~~~~~ILG~~fl~~~yvvfD~ 375 (403)
T 3aup_A 301 FGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCL-GVMNGGM--QPRAEITLGARQLEENLVVFDL 375 (403)
T ss_dssp CSCEECGGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEE-CEEECCS--CCSSSEEECHHHHTTSCEEEET
T ss_pred CCceEECCCcCcCCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEE-EEEcCCC--CCCCcEEEChHHhcCeEEEEEC
Confidence 2467899877789999999976 5999999999997542 36899 8876542 1245899999999999999999
Q ss_pred CCCeEEE-EecC
Q 010486 499 GKLRIGF-AEAA 509 (509)
Q Consensus 499 ~~~rIGf-a~~~ 509 (509)
+++|||| |+++
T Consensus 376 ~~~rIGf~A~~~ 387 (403)
T 3aup_A 376 ARSRVGFSTSSL 387 (403)
T ss_dssp TTTEEEEESSCG
T ss_pred CCCEEEEecccc
Confidence 9999999 8763
No 32
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=3.9e-52 Score=436.61 Aligned_cols=330 Identities=17% Similarity=0.233 Sum_probs=254.6
Q ss_pred CceeEeceec-CCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCC-----------CCCCcccCCCcccCCCC-----C
Q 010486 71 DEDILPLKNF-MDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSK-----------CYFSISCYFHSRYKSRK-----S 133 (509)
Q Consensus 71 ~~~~~~l~n~-~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~-----------C~~~~~C~~~~~f~~~~-----S 133 (509)
....+|++.. .+.+|+++|+||||||++.|++||||+++||+|.. |. +..|..++.|++.. +
T Consensus 7 ~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~-s~~C~~~~~~~~~~c~s~~~ 85 (413)
T 3vla_A 7 SALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCR-TSQCSLSGSIACGDCFNGPR 85 (413)
T ss_dssp SEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTT-SHHHHHTTCCEEECCSSCCB
T ss_pred ccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCC-cccccccccCCCcccccCCC
Confidence 3455777754 67899999999999999999999999999999965 43 45677777787642 3
Q ss_pred CCceecCcEEEEEcC-CCc-EEEEEEEEEEEEc---------eEEecCeEEEEEEEeCCccccccceeeEeecccccccc
Q 010486 134 NTYTEIGKSCEINYG-SGS-ISGFFSQDNVEVG---------DVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAV 202 (509)
Q Consensus 134 sT~~~~~~~~~~~Yg-~gs-~~G~~~~D~v~~g---------g~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~ 202 (509)
+++....|.|.+.|+ +|+ +.|++++|+|+|+ ++.++++.|||+..+.... ....+|||||||+...+
T Consensus 86 ~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~~~~dGIlGLg~~~lS- 163 (413)
T 3vla_A 86 PGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LASGVVGMAGLGRTRIA- 163 (413)
T ss_dssp TTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SCTTCCEEEECSSSSSS-
T ss_pred CCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-cccccccccccCCCCcc-
Confidence 456667799999995 654 7999999999997 3688899999998753211 23568999999998765
Q ss_pred CCCCchHHHHHHcCCCCCceEEEEecCCCCCCCCcEEEECCcCCC-----Ccccc-eEEEecCCc--------------C
Q 010486 203 GDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPK-----HFKGK-HTYVPVTKK--------------G 262 (509)
Q Consensus 203 ~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGgiD~~-----~~~g~-l~~~pv~~~--------------~ 262 (509)
+..+|.+++.+ +++||+||.+.. ..+|+|+||++|.. +|.|+ ++|+|+..+ .
T Consensus 164 -----l~sql~~~~~i-~~~FS~cL~~~~--~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~ 235 (413)
T 3vla_A 164 -----LPSQFASAFSF-KRKFAMCLSGST--SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSV 235 (413)
T ss_dssp -----HHHHHHHHHTC-CSEEEEECCSCS--SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCC
T ss_pred -----hHHHHhhhcCC-CceEEEeCCCCC--CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCc
Confidence 67889999888 899999998842 24899999999875 37888 999999765 6
Q ss_pred CcEEEEEEeeeEEECCeeeeeec--------CCceEEEcCCCcCcccCHHHHHHHHHHhCCCcceecceeehhhccchhh
Q 010486 263 YWQVNKFELGDILIGNQSTGVCE--------GGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLI 334 (509)
Q Consensus 263 ~w~~~~v~l~~i~v~~~~~~~~~--------~~~~~iiDTGTs~i~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~~~~~~ 334 (509)
||. |.|++|+|+++.+.++. +++.+||||||+++++|+++|++|.+++.++. ..
T Consensus 236 ~y~---V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~----------~~----- 297 (413)
T 3vla_A 236 EYF---IGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKES----------AA----- 297 (413)
T ss_dssp SCE---ECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHH----------HH-----
T ss_pred eEE---EEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHh----------cc-----
Confidence 999 99999999999886442 45789999999999999999999999986530 00
Q ss_pred HHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccc
Q 010486 335 WDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELC 414 (509)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 414 (509)
.+++....-..+ ..|
T Consensus 298 -----~~~~~~~~~~~~------------------------------------------------------------~~C 312 (413)
T 3vla_A 298 -----RNITRVASVAPF------------------------------------------------------------GAC 312 (413)
T ss_dssp -----TTCCEECCCTTC------------------------------------------------------------SCE
T ss_pred -----cCCCcCCCCCCC------------------------------------------------------------cce
Confidence 000000000000 123
Q ss_pred cCCCCCCCceEecCCC----CCCCCcEEEEECC--EEEEECcccceEeecccccceeeeeeeeccCCCCCCCceEECHhh
Q 010486 415 DSLPNPMGESIIDCDR----IPTMPNVSFTIGD--KIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVF 488 (509)
Q Consensus 415 ~~~~~~~~~~~~~C~~----~~~~P~l~f~fgg--~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~f 488 (509)
+.. +|.. ...+|+|+|+|+| +.|+|++++|+++..+ ...|+ +|...+. ..++.||||+.|
T Consensus 313 ~~~---------~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl-~~~~~~~--~~~~~~IlGd~f 378 (413)
T 3vla_A 313 FST---------DNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCL-GVVDGGS--NLRTSIVIGGHQ 378 (413)
T ss_dssp EEC---------TTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEE-CEEEEES--SCSSSEEECHHH
T ss_pred ecc---------CCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEE-EEEecCC--CcccceeEehhh
Confidence 322 2211 1268999999976 8999999999998653 35798 6766542 234689999999
Q ss_pred hcceEEEEeCCCCeEEEEec
Q 010486 489 MGVYHTVFDSGKLRIGFAEA 508 (509)
Q Consensus 489 l~~~y~vfD~~~~rIGfa~~ 508 (509)
||++|+|||++++|||||++
T Consensus 379 l~~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 379 LEDNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp HTTEEEEEETTTTEEEEEEE
T ss_pred hcCeEEEEECCCCEEEEEEe
Confidence 99999999999999999986
No 33
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.5e-49 Score=413.46 Aligned_cols=324 Identities=18% Similarity=0.257 Sum_probs=238.9
Q ss_pred eEece-ecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCC-------CCcccCCCcccCCCCCCCce-------e
Q 010486 74 ILPLK-NFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCY-------FSISCYFHSRYKSRKSNTYT-------E 138 (509)
Q Consensus 74 ~~~l~-n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~-------~~~~C~~~~~f~~~~SsT~~-------~ 138 (509)
.+|+. ++.+.+|+++|+|||| |+|||||+++||+|..|. .+..|..++.|++..+ ++. .
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~s~~C~~~~~~~~~sc-~~~~~~~~~~~ 77 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGC-PAPSCGSDKHD 77 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCTTC-CCCCC------
T ss_pred EEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCCCchhccccCCCCCCC-CCccCCcCcCC
Confidence 46777 6789999999999998 999999999999995442 1456776777877533 332 1
Q ss_pred cCc-EEEEEcCCCcE-EEEEEEEEEEEce----EEecCe----EEEEEEEeCCccccccceeeEeeccccccccCCCCch
Q 010486 139 IGK-SCEINYGSGSI-SGFFSQDNVEVGD----VVVKDQ----VFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPV 208 (509)
Q Consensus 139 ~~~-~~~~~Yg~gs~-~G~~~~D~v~~gg----~~~~~~----~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~ 208 (509)
..| .|.++|++|+. .|.+++|+|++++ ..++++ .|||+.......+ ....|||||||++..+ +
T Consensus 78 ~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------~ 150 (381)
T 1t6e_X 78 KPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------L 150 (381)
T ss_dssp CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------H
T ss_pred CccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------h
Confidence 234 59999999985 8999999999985 466665 5699876522222 3678999999998765 5
Q ss_pred HHHHHHcCCCCCceEEEEecCCCCCCCCcEEEECCcCCC--CcccceEEEecCCc---CCcEEEEEEeeeEEECCeeeee
Q 010486 209 WDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPK--HFKGKHTYVPVTKK---GYWQVNKFELGDILIGNQSTGV 283 (509)
Q Consensus 209 ~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGgiD~~--~~~g~l~~~pv~~~---~~w~~~~v~l~~i~v~~~~~~~ 283 (509)
..+|.++++ .+++||+||.+. .+|+|+|||+|.. +|.|+++|+|+.++ .+|. |.+++|+|+++.+.+
T Consensus 151 ~~ql~~~~~-~~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~---v~l~~i~vg~~~~~~ 222 (381)
T 1t6e_X 151 PAQVASAQK-VANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHY---ISARSIVVGDTRVPV 222 (381)
T ss_dssp HHHHHHHHT-CCSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCE---ECEEEEEETTEECCC
T ss_pred HHHHhhhcc-cCceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceE---EEEEEEEEcCEEecC
Confidence 678998884 579999999875 2899999998765 58999999999764 5788 999999999988765
Q ss_pred ecC---CceEEEcCCCcCcccCHHHHHHHHHHhCCCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCcc
Q 010486 284 CEG---GCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAE 360 (509)
Q Consensus 284 ~~~---~~~~iiDTGTs~i~lp~~~~~~i~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (509)
+.. ++.+||||||+++++|+++|++|.+++.++. .. +..++.
T Consensus 223 ~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~----------------------~~------------~~~~g~- 267 (381)
T 1t6e_X 223 PEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKAL----------------------AA------------QHANGA- 267 (381)
T ss_dssp CTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHH----------------------HH------------C------
T ss_pred CHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhh----------------------cc------------cccccc-
Confidence 433 4579999999999999999999999886530 00 000000
Q ss_pred ceecceeeeeeccccccCCcccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCC---------
Q 010486 361 YVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRI--------- 431 (509)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~--------- 431 (509)
+++.+. ...+ ...+|...
T Consensus 268 ----~~~~~~------------------------------------------------~~~~-~~~~C~~~~~~~~~~~~ 294 (381)
T 1t6e_X 268 ----PVARAV------------------------------------------------EAVA-PFGVCYDTKTLGNNLGG 294 (381)
T ss_dssp ------CCEE------------------------------------------------CCCT-TCSCEEEGGGCCEETTE
T ss_pred ----cccccC------------------------------------------------CCCC-CCCccCCCCCCcccccC
Confidence 000000 0000 01233321
Q ss_pred CCCCcEEEEEC-CEEEEECcccceEeecccccceeeeeeeeccCC---CCCCCceEECHhhhcceEEEEeCCCCeEEEEe
Q 010486 432 PTMPNVSFTIG-DKIFNLSPEQYILKTGEGIAEVCISGFMAFDLP---PPRGPLWILGDVFMGVYHTVFDSGKLRIGFAE 507 (509)
Q Consensus 432 ~~~P~l~f~fg-g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~---~~~~~~~ilG~~fl~~~y~vfD~~~~rIGfa~ 507 (509)
..+|+|+|+|+ |++++|++++|+++..+ ...|+ +|+..+.+ .+.++.||||+.|||++|+|||++++|||||+
T Consensus 295 ~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl-~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~ 371 (381)
T 1t6e_X 295 YAVPNVQLGLDGGSDWTMTGKNSMVDVKQ--GTACV-AFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSR 371 (381)
T ss_dssp ECCCCEEEEETTSCEEEECHHHHEEEEET--TEEEE-SEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred CcCCeEEEEECCCcEEEeCCCeEEEEcCC--CeEEE-EEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEec
Confidence 26899999996 59999999999998643 35798 57765421 11235899999999999999999999999999
Q ss_pred cC
Q 010486 508 AA 509 (509)
Q Consensus 508 ~~ 509 (509)
++
T Consensus 372 ~~ 373 (381)
T 1t6e_X 372 LP 373 (381)
T ss_dssp CC
T ss_pred cc
Confidence 75
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=3.5e-48 Score=377.81 Aligned_cols=238 Identities=63% Similarity=1.103 Sum_probs=217.9
Q ss_pred ceeEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCc
Q 010486 72 EDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS 151 (509)
Q Consensus 72 ~~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs 151 (509)
+..+||.|+.+.+|+++|+||||||+++|++||||+++||+|..|..+..|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 2 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (239)
T 1b5f_A 2 SAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGS 81 (239)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred CceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCc
Confidence 35689999999999999999999999999999999999999999964568999999999999999999999999999999
Q ss_pred EEEEEEEEEEEEceEEecCeEEEEEEEeCCccccccceeeEeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCC
Q 010486 152 ISGFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 231 (509)
Q Consensus 152 ~~G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~ 231 (509)
+.|.+++|+|++++..++++.||++....+..|....++||||||++..+ .|++++|++||.|.+++||+||.+..
T Consensus 82 ~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~~~FS~~l~~~~ 157 (239)
T 1b5f_A 82 ITGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNV 157 (239)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSC
T ss_pred EEEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCCCEEEEEEeCCC
Confidence 99999999999999999999999998876545556778999999998766 67889999999999999999998864
Q ss_pred CCCCCcEEEECCcCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHH
Q 010486 232 DAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINH 311 (509)
Q Consensus 232 ~~~~~G~L~fGgiD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~ 311 (509)
+....|+|+|||+|+++|.|+++|+|+.+.+||. |.+++|.|+++.+.++..+..+||||||+++++|++++++|++
T Consensus 158 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~---v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~ 234 (239)
T 1b5f_A 158 DEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQ---FGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINH 234 (239)
T ss_dssp SSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEE---EEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHH
T ss_pred CCCCCeEEEECCcChhhccCceEEEEcccCCeEE---EEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHH
Confidence 3345899999999999999999999999899999 9999999999987666678899999999999999999999999
Q ss_pred HhCCC
Q 010486 312 AIGGE 316 (509)
Q Consensus 312 ~~~~~ 316 (509)
+++++
T Consensus 235 ~iga~ 239 (239)
T 1b5f_A 235 AIGAN 239 (239)
T ss_dssp HTTCC
T ss_pred HhCCC
Confidence 99863
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=8.8e-45 Score=354.00 Aligned_cols=241 Identities=49% Similarity=0.957 Sum_probs=211.3
Q ss_pred ceEEecCeEEEEEEEeCCccccccceeeEeeccccccccCCCCchHHHHHHcCCCCCceEEEEecCCCCCCCCcEEEECC
Q 010486 164 GDVVVKDQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGG 243 (509)
Q Consensus 164 gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg 243 (509)
||++++++.|||++..++..|....++||||||++..+.....+++++|++||.|.+++||+||.+......+|+|+|||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 57889999999999877655666788999999999888777789999999999999999999998874333489999999
Q ss_pred cCCCCcccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHHHHHHHHHHhCCCcceecce
Q 010486 244 VDPKHFKGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAEC 323 (509)
Q Consensus 244 iD~~~~~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~~~~~i~~~~~~~~~~~~~c 323 (509)
+|+++|+|+++|+|+.+.+||. |.+++|+++++.+ .+..++.+||||||+++++|++++++|.+++++..
T Consensus 81 ~d~~~~~g~l~~~p~~~~~~~~---v~l~~i~v~~~~~-~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~------ 150 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTRKAYWQ---VHLDQVEVASGLT-LCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP------ 150 (241)
T ss_dssp CCGGGEEEEEEEEECSSBTTBE---EEEEEEEETTSCE-ESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE------
T ss_pred cCHHHcCCceEEEECccccEEE---EEEeEEEECCeeE-eccCCCEEEEECCCccccCCHHHHHHHHHHhCCee------
Confidence 9999999999999999999999 9999999999875 24567899999999999999999999999997640
Q ss_pred eehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeeccccccCCcccchhhhhHHHHHHHHhhhhhhH
Q 010486 324 KLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTK 403 (509)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (509)
T Consensus 151 -------------------------------------------------------------------------------- 150 (241)
T 1lya_B 151 -------------------------------------------------------------------------------- 150 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhhhccccCCCCCCCceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeeeccCCCCCCCceE
Q 010486 404 EKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWI 483 (509)
Q Consensus 404 ~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~i 483 (509)
...+.|.+||+...++|+|+|+|+|++++|++++|+++..+.+...|+++|+..+.+.+.++.||
T Consensus 151 ---------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~i 215 (241)
T 1lya_B 151 ---------------LIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWI 215 (241)
T ss_dssp ---------------EETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEE
T ss_pred ---------------ccCCcEEEECCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEE
Confidence 01356899999877899999999999999999999998765445689999988765444567899
Q ss_pred ECHhhhcceEEEEeCCCCeEEEEecC
Q 010486 484 LGDVFMGVYHTVFDSGKLRIGFAEAA 509 (509)
Q Consensus 484 lG~~fl~~~y~vfD~~~~rIGfa~~~ 509 (509)
||++|||++|+|||++++|||||+++
T Consensus 216 lG~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 216 LGDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp ECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred echHHhcceEEEEECCCCEEEEEEcC
Confidence 99999999999999999999999986
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.89 E-value=1.8e-23 Score=174.15 Aligned_cols=93 Identities=60% Similarity=1.057 Sum_probs=87.0
Q ss_pred eeEeceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCC-CcccCCCcccCCCCCCCceecCcEEEEEcCCCc
Q 010486 73 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS 151 (509)
Q Consensus 73 ~~~~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~-~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs 151 (509)
..+||.|+.+.+|+++|.||||||++.|+|||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~~~~~i~Yg~Gs 82 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGS 82 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCCCcEEEEECCcE
Confidence 3589999999999999999999999999999999999999999962 248999999999999999999999999999999
Q ss_pred EEEEEEEEEEEEce
Q 010486 152 ISGFFSQDNVEVGD 165 (509)
Q Consensus 152 ~~G~~~~D~v~~gg 165 (509)
+.|.+++|+|+|++
T Consensus 83 ~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 83 LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEEEEESC
T ss_pred EEEEEEEEEEEECC
Confidence 99999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.85 E-value=2.6e-21 Score=158.05 Aligned_cols=87 Identities=66% Similarity=1.107 Sum_probs=77.2
Q ss_pred CceEecCCCCCCCCcEEEEECCEEEEECcccceEeecccccceeeeeeeeccCCCCCCCceEECHhhhcceEEEEeCCCC
Q 010486 422 GESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKL 501 (509)
Q Consensus 422 ~~~~~~C~~~~~~P~l~f~fgg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~ 501 (509)
|.|.+||+.+.++|+|+|+|+|++++|+|++|+++...++...|+++|+..+.+ +.++.||||++|||++|+|||++++
T Consensus 1 G~y~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~-~~~~~~ILGd~Fl~~~y~vfD~~~~ 79 (87)
T 1b5f_B 1 EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDAT-LLGPLWILGDVFMRPYHTVFDYGNL 79 (87)
T ss_dssp CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCB-SSSBEEEECHHHHTTEEEEEETTTT
T ss_pred CcEEEECCCCCcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCC-CCCCeEEechHHhccEEEEEECCCC
Confidence 579999998888999999999999999999999987654456899999987654 4456899999999999999999999
Q ss_pred eEEEEecC
Q 010486 502 RIGFAEAA 509 (509)
Q Consensus 502 rIGfa~~~ 509 (509)
|||||+++
T Consensus 80 riGfA~~~ 87 (87)
T 1b5f_B 80 LVGFAEAA 87 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99999986
No 38
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=99.56 E-value=4.2e-16 Score=131.95 Aligned_cols=104 Identities=62% Similarity=1.117 Sum_probs=76.4
Q ss_pred CCcceecceeehhhccchhhHHHHhhCCCCccccccccccccCCccceecceeeeeecccc--ccCCcccchhhhhHHHH
Q 010486 315 GEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENV--SAGDSAVCSACEMAVVW 392 (509)
Q Consensus 315 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 392 (509)
|.+.++..|+.++++|++.+++.+++.+.|..+|.++|+|..++.+.++.+|++|+++++. +..+++.|.+|+|++.|
T Consensus 3 a~g~~~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~~~~i~~vv~~~~~~~~~~~~~~C~~Ce~~V~~ 82 (108)
T 3rfi_A 3 AMAIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERETEGSSVGEAPLCTACEMAVVW 82 (108)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC------------------------CCHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCcccccccccccccccccccccCCCCCcChhHHHHHHH
Confidence 3455677899999999999999999999999999999999999988888999999987632 22489999999999999
Q ss_pred HHHHhhhhhhHHHHhhhhhccccCCC
Q 010486 393 VQNQLKQKQTKEKVLSYINELCDSLP 418 (509)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~c~~~~ 418 (509)
++++|++|.|+++|+.+++++|..+|
T Consensus 83 ie~~L~~N~Te~eI~~~l~k~C~~LP 108 (108)
T 3rfi_A 83 MQNQLKQEGTKEKVLEYVNQLCEKIP 108 (108)
T ss_dssp HHHHHTSHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhcCchHHHHHHHHHHHHhhCc
Confidence 99999999999999999999999875
No 39
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=96.92 E-value=0.00037 Score=56.32 Aligned_cols=43 Identities=23% Similarity=0.574 Sum_probs=39.6
Q ss_pred CCcccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCC
Q 010486 378 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNP 420 (509)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 420 (509)
.++..|..|++++.|++++|+.+.|+++|..+++++|..+|..
T Consensus 3 ~~~~~C~~C~~vv~~i~~~l~~n~t~~~I~~~l~~~C~~lp~~ 45 (91)
T 2qyp_A 3 VSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKS 45 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHTSCSS
T ss_pred CCCCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHCCCC
Confidence 3678999999999999999999999999999999999998864
No 40
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=96.91 E-value=0.00047 Score=54.66 Aligned_cols=42 Identities=36% Similarity=0.699 Sum_probs=38.4
Q ss_pred CcccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCC
Q 010486 379 DSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNP 420 (509)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 420 (509)
.+..|..|++++.+++++++.+.|+++|..+++++|..+|.+
T Consensus 2 ~~~~C~~C~~~v~~~~~~l~~n~t~~~I~~~l~~~C~~lp~~ 43 (83)
T 4ddj_A 2 GSLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKP 43 (83)
T ss_dssp -CHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTSCTT
T ss_pred CCCcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHhCCCc
Confidence 356899999999999999999999999999999999998753
No 41
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=96.84 E-value=0.00046 Score=54.08 Aligned_cols=40 Identities=25% Similarity=0.639 Sum_probs=37.9
Q ss_pred cccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCC
Q 010486 380 SAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPN 419 (509)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 419 (509)
+..|..|++++.|+++.+.++.|+++|..+++++|..+|.
T Consensus 2 ~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~ 41 (80)
T 3bqp_A 2 GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPD 41 (80)
T ss_dssp CTTHHHHHHHHHHHHHHSCTTCCHHHHHHHHHHHGGGSCG
T ss_pred cCcchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCCC
Confidence 5689999999999999999999999999999999999875
No 42
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=95.95 E-value=0.0038 Score=49.28 Aligned_cols=41 Identities=24% Similarity=0.625 Sum_probs=37.9
Q ss_pred CcccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCC
Q 010486 379 DSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPN 419 (509)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 419 (509)
++..|..|++++.+++..+..+.|+++|..+++++|..+|.
T Consensus 3 ~~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~ 43 (83)
T 2gtg_A 3 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK 43 (83)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCH
T ss_pred CCCcChhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHCCC
Confidence 56789999999999999999999999999999999998874
No 43
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=95.53 E-value=0.0058 Score=47.27 Aligned_cols=38 Identities=16% Similarity=0.226 Sum_probs=35.7
Q ss_pred ccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCC
Q 010486 381 AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPN 419 (509)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 419 (509)
..|..|+.++.+++.++ .+.|+++|...+++.|..+|.
T Consensus 2 ~~C~~C~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~ 39 (74)
T 1l9l_A 2 RDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRS 39 (74)
T ss_dssp HHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCH
T ss_pred CCChHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHhCCh
Confidence 56999999999999999 999999999999999998864
No 44
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=95.51 E-value=0.0057 Score=47.67 Aligned_cols=40 Identities=28% Similarity=0.519 Sum_probs=37.0
Q ss_pred cccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCC
Q 010486 380 SAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNP 420 (509)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 420 (509)
+..|..|+++++.++..+..+ |+++|..++++.|..+|.+
T Consensus 2 ~~~C~~C~~vv~~ve~~l~~n-t~~~I~~~l~~~C~~lp~~ 41 (77)
T 1of9_A 2 EILCNLCTGLINTLENLLTTK-GADKVKDYISSLCNKASGF 41 (77)
T ss_dssp CSSHHHHHHHHHHHHHHCSSS-CSHHHHHHHHHHHTTCSST
T ss_pred CCcchhHHHHHHHHHHHHHHC-cHHHHHHHHHHHHHcCChH
Confidence 567999999999999999999 9999999999999998653
No 45
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=95.28 E-value=0.0088 Score=47.01 Aligned_cols=41 Identities=27% Similarity=0.495 Sum_probs=38.0
Q ss_pred CcccchhhhhHHHHHHHHhhhhhhH-HHHhhhhhccccCCCC
Q 010486 379 DSAVCSACEMAVVWVQNQLKQKQTK-EKVLSYINELCDSLPN 419 (509)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~c~~~~~ 419 (509)
++..|..|+.++..++..+..+.|+ ++|..++++.|..+|.
T Consensus 2 ~~~~C~~C~~~V~~ve~~l~~n~t~~~~I~~~l~~~C~~lp~ 43 (81)
T 1n69_A 2 DGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGP 43 (81)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCT
T ss_pred CCCcchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHcCc
Confidence 4678999999999999999999999 9999999999999874
No 46
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=94.85 E-value=0.0087 Score=46.70 Aligned_cols=39 Identities=15% Similarity=0.429 Sum_probs=36.8
Q ss_pred ccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCC
Q 010486 381 AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPN 419 (509)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 419 (509)
..|..|+++++.++..+..+.|+++|...+++.|..+|.
T Consensus 2 ~~C~~C~~iv~~ve~~l~~~~t~~~I~~~l~~~C~~lp~ 40 (78)
T 1nkl_A 2 YFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI 40 (78)
T ss_dssp CHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS
T ss_pred CcchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhhCch
Confidence 469999999999999999999999999999999998874
No 47
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.66 E-value=0.083 Score=46.11 Aligned_cols=96 Identities=18% Similarity=0.208 Sum_probs=53.6
Q ss_pred eceecCCceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCCc--EE
Q 010486 76 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGS--IS 153 (509)
Q Consensus 76 ~l~n~~~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~gs--~~ 153 (509)
|..-.....+++++.|+. +++++++|||++.+.+...... .+......+ ..+. ....|.|. ..
T Consensus 18 p~~~~~~~~~~v~v~InG--~~~~~LvDTGAs~s~is~~~a~---~lgl~~~~~----~~~~------~~a~g~g~~~~~ 82 (148)
T 2i1a_A 18 PEMFTQVPMLYINIEINN--YPVKAFVDTGAQTTIMSTRLAK---KTGLSRMID----KRFI------GEARGVGTGKII 82 (148)
T ss_dssp -----CCCCCEEEEEETT--EEEEEEECTTCSSCEEEHHHHH---HHTGGGGCB----CCCC-----------------C
T ss_pred chhhcccceEEEEEEECC--EEEEEEEECCCCccccCHHHHH---HcCCCccCC----cceE------EEEecCCCcccc
Confidence 333334667999999987 8999999999999988643211 111111111 1111 01122222 35
Q ss_pred EEEEEEEEEEceEEecCeEEEEEEEeCCccccccceeeEeecc
Q 010486 154 GFFSQDNVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLG 196 (509)
Q Consensus 154 G~~~~D~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg 196 (509)
|....+.+.+|+...+ ..|.+.. ...+||||+-
T Consensus 83 ~~~~~~~i~ig~~~~~-~~~~vl~---------~~~d~iLG~d 115 (148)
T 2i1a_A 83 GRIHQAQVKIETQYIP-CSFTVLD---------TDIDVLIGLD 115 (148)
T ss_dssp EEEEEEEEEETTEEEE-EEEEEEC---------SSCSEEECHH
T ss_pred cEEEEEEEEECCEEec-eeEEEec---------CCCCeEecHH
Confidence 6667789999997764 5555432 1358999996
No 48
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=92.51 E-value=0.028 Score=45.97 Aligned_cols=53 Identities=15% Similarity=0.331 Sum_probs=42.7
Q ss_pred cCCcccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCCCCCCCceEecCCCC
Q 010486 377 AGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRI 431 (509)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~ 431 (509)
..++..|..|+++++.+++.+ +.|+++|...+++.|..+|.....+.-.|..+
T Consensus 18 ~~~~~~C~~C~~vV~~ve~~l--n~t~~~I~~~L~~~C~~lp~~ipf~~~~C~~~ 70 (99)
T 2js9_A 18 GRSALSCQMCELVVKKYEGSA--DKDANVIKKDFDAECKKLFHTIPFGTRECDHY 70 (99)
T ss_dssp -CCSSTHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHHTGGGGSTTHHHHHHTT
T ss_pred CCCCCcchhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHcCCCcchHHHHHHHHH
Confidence 357889999999999999999 88999999999999999874322244566643
No 49
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.06 E-value=0.33 Score=42.15 Aligned_cols=26 Identities=12% Similarity=-0.004 Sum_probs=23.7
Q ss_pred ceEECHhhhcceEEEEeCCCCeEEEE
Q 010486 481 LWILGDVFMGVYHTVFDSGKLRIGFA 506 (509)
Q Consensus 481 ~~ilG~~fl~~~y~vfD~~~~rIGfa 506 (509)
..|||..||+++-...|+.++++-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 47999999999999999999999774
No 50
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=88.19 E-value=0.093 Score=41.92 Aligned_cols=39 Identities=38% Similarity=0.734 Sum_probs=34.3
Q ss_pred eecceeehhhccchhhHHHHhhCCCCccccccccccccC
Q 010486 319 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFN 357 (509)
Q Consensus 319 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (509)
+...|+..+++|++.+++.+.+...|+.+|.++|+|.-.
T Consensus 46 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~~ 84 (91)
T 2qyp_A 46 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGT 84 (91)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC---
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCCCc
Confidence 467799999999999999999999999999999999654
No 51
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=87.38 E-value=0.45 Score=41.64 Aligned_cols=91 Identities=12% Similarity=0.211 Sum_probs=54.6
Q ss_pred CceEEEEEEeCCCCceEEEEEeCCCCcEEEeCCCCCCCcccCCCcccCCCCCCCceecCcEEEEEcCCC--cEEEEEEEE
Q 010486 82 DAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSG--SISGFFSQD 159 (509)
Q Consensus 82 ~~~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~f~~~~SsT~~~~~~~~~~~Yg~g--s~~G~~~~D 159 (509)
-..|++++.|+. +++++++|||++.+.+...... .|.....-+. .+. ....+.| ...|.+...
T Consensus 22 ~~~l~v~~~Ing--~~v~~LVDTGAs~s~Is~~~A~---rlGL~~~~~~----~~~------~~a~g~G~~~~~g~v~~~ 86 (148)
T 3s8i_A 22 VTMLYINCKVNG--HPLKAFVDSGAQMTIMSQACAE---RCNIMRLVDR----RWA------GVAKGVGTQRIIGRVHLA 86 (148)
T ss_dssp CCCCEEEEEETT--EEEEEEECTTCSSCEEEHHHHH---HTTCGGGEEG----GGC------EECCC---CEEEEEEEEE
T ss_pred cCEEEEEEEECC--EEEEEEEeCCCCcEeeCHHHHH---HcCCccccCc----cee------EEEEcCCccEEEEEEEEE
Confidence 456899999987 9999999999999999653221 2221111000 010 0112222 246777788
Q ss_pred EEEEceEEecCeEEEEEEEeCCccccccceeeEeecc
Q 010486 160 NVEVGDVVVKDQVFIEATREGSLTFLLARFDGIIGLG 196 (509)
Q Consensus 160 ~v~~gg~~~~~~~fg~a~~~~~~~~~~~~~dGIlGLg 196 (509)
.+++|+..++ ..|.+.. ....++|||+-
T Consensus 87 ~I~Ig~~~~~-~~~~Vle--------~~~~d~LLGmD 114 (148)
T 3s8i_A 87 QIQIEGDFLQ-CSFSILE--------DQPMDMLLGLD 114 (148)
T ss_dssp EEEETTEEEE-EEEEEET--------TCSSSEEECHH
T ss_pred EEEECCEEEE-EEEEEeC--------CCCcCeeccHH
Confidence 9999987653 4444332 22358999995
No 52
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=87.09 E-value=0.17 Score=41.25 Aligned_cols=36 Identities=31% Similarity=0.517 Sum_probs=34.2
Q ss_pred eecceeehhhccchhhHHHHhhCCCCcccccccccc
Q 010486 319 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLC 354 (509)
Q Consensus 319 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (509)
+...|+..+++|++.+++.+.....|+.+|.+.++|
T Consensus 63 ~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~L~lC 98 (99)
T 2js9_A 63 GTRECDHYVNSKVDPIIHELEGGTAPKDVCTKLNEC 98 (99)
T ss_dssp HHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 567799999999999999999999999999999998
No 53
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=86.75 E-value=0.12 Score=40.14 Aligned_cols=37 Identities=22% Similarity=0.492 Sum_probs=34.3
Q ss_pred eecceeehhhccchhhHHHHhhCCCCccccccccccc
Q 010486 319 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCA 355 (509)
Q Consensus 319 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (509)
....|+..+++|++.+++.+..+..|+.+|.++|+|.
T Consensus 41 ~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~ 77 (78)
T 1nkl_A 41 LRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICK 77 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCC
Confidence 4567999999999999999999999999999999994
No 54
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=86.35 E-value=0.12 Score=39.86 Aligned_cols=37 Identities=30% Similarity=0.679 Sum_probs=34.2
Q ss_pred eecceeehhhccchhhHHHHhhCCCCccccccccccc
Q 010486 319 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCA 355 (509)
Q Consensus 319 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (509)
+...|+..+++|++.+++.+.+...|+.+|...|+|.
T Consensus 43 ~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~ 79 (80)
T 3bqp_A 43 YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACP 79 (80)
T ss_dssp GHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSC
T ss_pred cchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCC
Confidence 4667999999999999999999999999999999993
No 55
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=85.72 E-value=0.13 Score=39.72 Aligned_cols=36 Identities=19% Similarity=0.393 Sum_probs=33.6
Q ss_pred eecceeehhhccchhhHHHHhhCCCCcccccccccc
Q 010486 319 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLC 354 (509)
Q Consensus 319 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (509)
....|+..+++|++.+++.+..+..|+.+|...|+|
T Consensus 42 ~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC 77 (77)
T 1of9_A 42 IATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 77 (77)
T ss_dssp THHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 456799999999999999999999999999999988
No 56
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=85.23 E-value=0.16 Score=39.72 Aligned_cols=37 Identities=41% Similarity=0.816 Sum_probs=34.1
Q ss_pred eecceeehhhccchhhHHHHhhCCCCccccccccccc
Q 010486 319 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCA 355 (509)
Q Consensus 319 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (509)
+...|+..+++|++.+++.+.+...|+.+|...|+|.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~ 81 (83)
T 2gtg_A 45 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCS 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCCC
Confidence 3567999999999999999999999999999999994
No 57
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=83.39 E-value=3.2 Score=36.08 Aligned_cols=26 Identities=15% Similarity=0.029 Sum_probs=23.6
Q ss_pred ceEECHhhhcceEEEEeCCCCeEEEE
Q 010486 481 LWILGDVFMGVYHTVFDSGKLRIGFA 506 (509)
Q Consensus 481 ~~ilG~~fl~~~y~vfD~~~~rIGfa 506 (509)
..|||..||+++-.+.|+.++++-|.
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~ 133 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIG 133 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEc
Confidence 57999999999999999999998764
No 58
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=78.99 E-value=2.4 Score=34.27 Aligned_cols=29 Identities=24% Similarity=0.329 Sum_probs=25.3
Q ss_pred EEEEEeCCCCceEEEEEeCCCCcEEEeCCCC
Q 010486 86 FGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC 116 (509)
Q Consensus 86 ~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C 116 (509)
++.+.||. |.+.+++|||.+++-+....+
T Consensus 10 ~vtvkI~G--q~~eaLLDTGAD~TVl~~~~~ 38 (99)
T 2hs1_A 10 LVTIKIGG--QLKEALLDTGADDTIIEEMSL 38 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSEEESCCSS
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEecccC
Confidence 56799998 999999999999999976554
No 59
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=77.27 E-value=0.43 Score=37.09 Aligned_cols=36 Identities=25% Similarity=0.730 Sum_probs=30.3
Q ss_pred eecceeehhhccchhhHHHHhhCCCCccccccccccc
Q 010486 319 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCA 355 (509)
Q Consensus 319 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (509)
+...|+.++++|++.+.+ ++....|+.+|.+.|+|.
T Consensus 45 ~~~~C~~~V~~y~~~ii~-~l~~~~P~~iC~~lglC~ 80 (81)
T 1n69_A 45 MADICKNYISQYSEIAIQ-MMMHMQPKEICALVGFCD 80 (81)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHTTSCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHH-HHhcCCHHHHHhhcCCCC
Confidence 466799999999996665 555899999999999993
No 60
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=76.19 E-value=0.56 Score=35.94 Aligned_cols=34 Identities=18% Similarity=0.448 Sum_probs=30.3
Q ss_pred eecceeehhhccchhhHHHHhhCCCCcccccccc
Q 010486 319 VSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIG 352 (509)
Q Consensus 319 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (509)
+...|+..+++|++.+.+.+++...|+.+|.+++
T Consensus 41 ~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~ik 74 (74)
T 1l9l_A 41 WRDVCRNFMRRYQSRVIQGLVAGETAQQICEDLR 74 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcC
Confidence 3556999999999999999999999999998753
No 61
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=75.88 E-value=0.42 Score=37.18 Aligned_cols=36 Identities=36% Similarity=0.760 Sum_probs=32.9
Q ss_pred ecceeehhhccchhhHHHHhhCC-CCccccccccccc
Q 010486 320 SAECKLVVSQYGDLIWDLLVSGL-LPEKVCQQIGLCA 355 (509)
Q Consensus 320 ~~~c~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 355 (509)
...|+..+++|++.+++.+.+.+ .|+.+|...|+|.
T Consensus 46 ~~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~ 82 (83)
T 4ddj_A 46 SASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCE 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCC
Confidence 56799999999999999999884 9999999999994
No 62
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=75.09 E-value=2.6 Score=34.39 Aligned_cols=27 Identities=19% Similarity=0.240 Sum_probs=23.8
Q ss_pred EEEEEEeCCCCceEEEEEeCCCCcEEEeC
Q 010486 85 YFGEIGIGSPPQNFSVIFDTGSSNLWVPS 113 (509)
Q Consensus 85 Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~ 113 (509)
=++.+.||. |.+.+++|||.+++-+..
T Consensus 9 P~v~v~I~G--q~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIND--TPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEEH
T ss_pred CEEEEEECC--EEEEEEeccCCCcEEEcc
Confidence 367899998 999999999999999973
No 63
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=72.53 E-value=4.1 Score=32.90 Aligned_cols=29 Identities=24% Similarity=0.249 Sum_probs=25.1
Q ss_pred EEEEEeCCCCceEEEEEeCCCCcEEEeCCCC
Q 010486 86 FGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC 116 (509)
Q Consensus 86 ~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C 116 (509)
++.+.||. |.+.+++|||.+++-+...++
T Consensus 10 ~vti~I~G--q~~e~LLDTGAD~TVl~~~~~ 38 (99)
T 3ec0_A 10 VVTAYIEG--QPVEVLLDTGADDSIVAGIEL 38 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEESSCCC
T ss_pred eEEEEECC--EEEEEEEecCCCceEEcCccc
Confidence 56799998 999999999999999976544
No 64
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=66.32 E-value=4.4 Score=33.52 Aligned_cols=32 Identities=19% Similarity=0.309 Sum_probs=26.1
Q ss_pred EEEEEeC---CCCceEEEEEeCCCCcEEEeCCCCC
Q 010486 86 FGEIGIG---SPPQNFSVIFDTGSSNLWVPSSKCY 117 (509)
Q Consensus 86 ~~~i~IG---tPpQ~~~v~lDTGSs~~WV~~~~C~ 117 (509)
.+.|.|| +|+|.+..++|||.+++-+....++
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 4556665 7789999999999999999876664
No 65
>1htr_P Progastricsin (Pro segment); aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_P
Probab=64.73 E-value=10 Score=24.80 Aligned_cols=26 Identities=12% Similarity=0.073 Sum_probs=21.3
Q ss_pred eEEEeeEeecCchhhhHHhhhhhHhh
Q 010486 28 LRRIGLKKRRLDLHSLNAARITRKER 53 (509)
Q Consensus 28 ~~rvpL~~~~~~~~~~~~~~~~~~~~ 53 (509)
++||||++.++.+..+.+.+....++
T Consensus 2 l~RIpL~K~~s~R~~l~~~g~~~~~l 27 (43)
T 1htr_P 2 VVKVPLKKFKSIRETMKEKGLLGEFL 27 (43)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHHH
T ss_pred eEEEeeeEcchHHHHHHHcCcHHHHH
Confidence 68999999999998888777666654
No 66
>3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens}
Probab=62.57 E-value=5.7 Score=26.66 Aligned_cols=26 Identities=23% Similarity=0.176 Sum_probs=20.8
Q ss_pred CceEEEeeEeecCchhhhHHhhhhhH
Q 010486 26 NGLRRIGLKKRRLDLHSLNAARITRK 51 (509)
Q Consensus 26 ~~~~rvpL~~~~~~~~~~~~~~~~~~ 51 (509)
++++||||++.++.++.+.+.+....
T Consensus 6 ~~l~RIPL~k~kS~R~~l~e~g~~~~ 31 (43)
T 3vcm_P 6 TTFKRIFLKRMPSIRESLKERGVDMA 31 (43)
T ss_dssp CCCEEEEEEECCCHHHHHHHHTCCGG
T ss_pred cceeEEeeeecccHHHHHHHcCchHH
Confidence 35789999999999998888765443
No 67
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=60.61 E-value=7.2 Score=32.45 Aligned_cols=25 Identities=16% Similarity=0.212 Sum_probs=22.2
Q ss_pred EEeCCCCceEEEEEeCCCCcEEEeCCC
Q 010486 89 IGIGSPPQNFSVIFDTGSSNLWVPSSK 115 (509)
Q Consensus 89 i~IGtPpQ~~~v~lDTGSs~~WV~~~~ 115 (509)
+.||. |.+.+++|||.+++-+....
T Consensus 18 ikI~G--q~~eaLLDTGAD~TVi~~~~ 42 (116)
T 2hah_A 18 IFVNG--YPIKFLLDTGADITVLNRRD 42 (116)
T ss_dssp EEETT--EEEEEEECTTCSSCEEEGGG
T ss_pred EEECC--EEEEEEecCCCCcEEEcccc
Confidence 99997 99999999999999997543
No 68
>1tzs_P Activation peptide from cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=60.24 E-value=5.7 Score=24.66 Aligned_cols=27 Identities=19% Similarity=0.138 Sum_probs=20.2
Q ss_pred ceEEEeeEeecCchhhhHHhhhhhHhh
Q 010486 27 GLRRIGLKKRRLDLHSLNAARITRKER 53 (509)
Q Consensus 27 ~~~rvpL~~~~~~~~~~~~~~~~~~~~ 53 (509)
+++||||++.++.+..+.+.+....++
T Consensus 2 ~l~rIpL~K~~s~r~~l~~~g~~~~~l 28 (35)
T 1tzs_P 2 SLHRVPLRRHPSLKKKLRARSQLSEFW 28 (35)
T ss_pred cEEEEEeEEchHHHHHHHHcccHHHHH
Confidence 478999999998888777666554443
No 69
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=55.63 E-value=9.7 Score=31.53 Aligned_cols=29 Identities=10% Similarity=0.127 Sum_probs=25.1
Q ss_pred EEEEEeCCCCceEEEEEeCCCCcEEEeCCCC
Q 010486 86 FGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC 116 (509)
Q Consensus 86 ~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C 116 (509)
.+.+.||. |.+..++|||.+++-+...++
T Consensus 11 ~vti~I~G--q~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 11 SLTLWLDD--KMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEEGGGS
T ss_pred eEEEEECC--EEEEEEEccCCCceEEecccC
Confidence 56788998 999999999999999986555
No 70
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=50.67 E-value=17 Score=30.95 Aligned_cols=30 Identities=17% Similarity=0.257 Sum_probs=25.4
Q ss_pred eEEEEEEeCCCCceEEEEEeCCCCcEEEeCCC
Q 010486 84 QYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSK 115 (509)
Q Consensus 84 ~Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~ 115 (509)
.=++.+.|+. |.+.+++|||.+++-+....
T Consensus 22 RP~v~i~I~G--~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 22 EPRITLKVGG--QPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp SSEEEEEETT--EEEEEEECTTCSSCEECSCC
T ss_pred CCEEEEEECC--EEEEEEEeCCCCeEEEcccc
Confidence 4567799998 99999999999999997544
No 71
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=50.44 E-value=3.4 Score=32.55 Aligned_cols=49 Identities=24% Similarity=0.365 Sum_probs=38.6
Q ss_pred HHHHHHHh-CCCcceecceeehhhccchhhHHHHhhCCCCcccccccccc
Q 010486 306 VTEINHAI-GGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLC 354 (509)
Q Consensus 306 ~~~i~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (509)
+++.=..+ ++..+....|+.++.+|.+.|+.++-.+.+|..+|..++.|
T Consensus 38 ~d~~Ckk~~~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~~C 87 (87)
T 3s64_A 38 FIQGCMTLIGWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLHAC 87 (87)
T ss_dssp HHHHHHHHHCSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHHCC
T ss_pred HHHHHHHhcccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhccC
Confidence 33333333 44445567899999999999999999999999999988766
No 72
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=43.03 E-value=21 Score=29.92 Aligned_cols=25 Identities=12% Similarity=0.170 Sum_probs=20.5
Q ss_pred eCCCCceEEEEEeCCCCcEEEeCCCCC
Q 010486 91 IGSPPQNFSVIFDTGSSNLWVPSSKCY 117 (509)
Q Consensus 91 IGtPpQ~~~v~lDTGSs~~WV~~~~C~ 117 (509)
||. |.+..++|||.+++-+.....+
T Consensus 27 i~g--q~~eaLLDTGAD~TVl~~~~lP 51 (124)
T 2rsp_A 27 QRS--VYITALLDSGADITIISEEDWP 51 (124)
T ss_dssp CSE--EEEEEEECTTCSSCEEETTTSC
T ss_pred CCC--EEEEEEecCCCCcEEEecccCC
Confidence 555 7789999999999999876553
No 73
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=40.38 E-value=22 Score=32.54 Aligned_cols=29 Identities=24% Similarity=0.303 Sum_probs=24.9
Q ss_pred EEEEEEeCCCCceEEEEEeCCCCcEEEeCCC
Q 010486 85 YFGEIGIGSPPQNFSVIFDTGSSNLWVPSSK 115 (509)
Q Consensus 85 Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~ 115 (509)
-.+.+.||. |.+.+++|||.+++-+...+
T Consensus 9 P~vtv~I~G--q~~e~LLDTGAD~TVl~~~~ 37 (203)
T 3ka2_A 9 PLVTIRIGG--QLKEALLDTGADDTVIEELN 37 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEECSCC
T ss_pred CeEEEEECC--EEEEEEEecCCCceEEeccc
Confidence 467899998 99999999999999996543
No 74
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=38.89 E-value=28 Score=33.80 Aligned_cols=42 Identities=19% Similarity=0.204 Sum_probs=31.3
Q ss_pred ccceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHH
Q 010486 250 KGKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 304 (509)
Q Consensus 250 ~g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~ 304 (509)
.|.+...|+..+..|. + .|.||.+. ..++||||++.+.+|..
T Consensus 3 ~g~v~~~~~~~~~~Y~---~---~i~iG~Q~-------~~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 3 SGVATNTPTANDEEYI---T---PVTIGGTT-------LNLNFDTGSADLWVFST 44 (323)
T ss_dssp CEEEEEEECGGGSCEE---E---EEEETTEE-------EEEEEETTCCCEEECBT
T ss_pred CCceeeeecCCCCEEE---E---EEEECCEE-------EEEEEeCCCcceEEecC
Confidence 3666777777777776 3 46788443 46899999999999974
No 75
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=37.72 E-value=29 Score=33.67 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=30.4
Q ss_pred cceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHH
Q 010486 251 GKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 304 (509)
Q Consensus 251 g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~ 304 (509)
|.+...|+..+..|. + .|.||.+. ..++||||++.+++|..
T Consensus 3 ~~v~~~~~~~~~~Y~---~---~i~iG~Q~-------~~v~~DTGSs~lWv~~~ 43 (325)
T 1ibq_A 3 GSAVTTPQNNDEEYL---T---PVTVGKST-------LHLDFDTGSADLWVFSD 43 (325)
T ss_dssp EEEEEEECTTTSCEE---E---EEEEBTEE-------EEEEEETTCCCEEEECT
T ss_pred ceEEeEEcCCCCEEE---E---EEEECCEE-------EEEEEeCCCccceEeeC
Confidence 556677777777776 3 46777443 46899999999999974
No 76
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=35.88 E-value=34 Score=33.22 Aligned_cols=41 Identities=17% Similarity=0.227 Sum_probs=30.4
Q ss_pred cceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHH
Q 010486 251 GKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 304 (509)
Q Consensus 251 g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~ 304 (509)
|.+...|+..+..|. + .|.||.+. ..++||||++.+++|..
T Consensus 4 ~~v~~~~~~~~~~Y~---~---~i~iG~q~-------~~v~~DTGSs~lWv~~~ 44 (323)
T 1izd_A 4 GSVTTNPTSNDEEYI---T---QVTVGDDT-------LGLDFDTGSADLWVFSS 44 (323)
T ss_dssp EEEEEEECGGGCCEE---E---EEEETTEE-------EEEEEETTCCCEEECBT
T ss_pred CceeeeEcCCCCEEE---E---EEEECCEE-------EEEEEcCCCcceEEecC
Confidence 556667776666776 3 46788433 46899999999999975
No 77
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=29.69 E-value=9.3 Score=30.02 Aligned_cols=38 Identities=21% Similarity=0.411 Sum_probs=31.2
Q ss_pred CCcccchhhhhHHHHHHHHhhhhhhHHHHhhhhhccccCC
Q 010486 378 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSL 417 (509)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 417 (509)
.++..|..|+++++.++..+.. +..++...+...|...
T Consensus 8 ~~~l~C~~C~~~Vk~~e~~i~~--~~~eie~~~d~~Ckk~ 45 (87)
T 3s64_A 8 SNVIVCEICKMAVKLIVPEADK--DLDQLEKEFIQGCMTL 45 (87)
T ss_dssp CCTTHHHHHHHHHHHHTTCSSC--SSTTHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHh
Confidence 4668899999999999999875 4446888888888755
No 78
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=26.69 E-value=61 Score=31.39 Aligned_cols=43 Identities=19% Similarity=0.075 Sum_probs=29.5
Q ss_pred cceEEE-ecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHH
Q 010486 251 GKHTYV-PVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 304 (509)
Q Consensus 251 g~l~~~-pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~ 304 (509)
|.+... |...+..|. + .|.||.- .....++||||++.+++|..
T Consensus 3 ~~v~~~~~~~~~~~Y~---~---~i~iGTP-----~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 3 GSATTTPIDSLDDAYI---T---PVQIGTP-----AQTLNLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEEESSTTCCCEE---E---EEEETTT-----TEEEEEEEETTCCCEEECBT
T ss_pred ceeEeeecCCCCCEEE---E---EEEECCC-----CeEEEEEECCCCCCeEEecC
Confidence 445555 666666676 3 5678732 22347999999999999964
No 79
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=24.98 E-value=68 Score=31.02 Aligned_cols=43 Identities=16% Similarity=0.073 Sum_probs=29.2
Q ss_pred cceEEE-ecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHH
Q 010486 251 GKHTYV-PVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 304 (509)
Q Consensus 251 g~l~~~-pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~ 304 (509)
|.+... |...+..|. + .|.||.- .....++||||++.+.+|..
T Consensus 3 ~~v~~~~~~~~~~~Y~---~---~i~iGTP-----~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 3c9x_A 3 GSAPNHPSDSADSEYI---T---SVSIGTP-----AQVLPLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEEESSTTCCCEE---E---EEEETTT-----TEEEEEEEETTCCCEEECBT
T ss_pred cceeeecCCCCCCEEE---E---EEEECCC-----CeEEEEEEcCCCCCeEEecC
Confidence 445555 555566676 3 5678742 22347999999999999974
No 80
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=23.93 E-value=58 Score=31.94 Aligned_cols=44 Identities=16% Similarity=0.103 Sum_probs=29.9
Q ss_pred ccceEEEecCC--cCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHH
Q 010486 250 KGKHTYVPVTK--KGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 304 (509)
Q Consensus 250 ~g~l~~~pv~~--~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~ 304 (509)
+|.+...|+.. +..|. ..|.||.- .....++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~~~~Y~------~~i~iGtP-----~q~~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYA------IPVSIGTP-----GQDFYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTTTEEE------EEEEETTT-----TEEEEEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCCCEEE------EEEEECCC-----CcEEEEEEcCCCCCeEECCC
Confidence 46667778764 44565 35778742 22347999999999999864
No 81
>4g1a_A AQ-C16C19 peptide; helical bundles, metallopeptide complexes, polynuclear metal CD(II), SELF-assembly, metal binding protein; 1.85A {Synthetic construct}
Probab=23.09 E-value=23 Score=21.26 Aligned_cols=13 Identities=31% Similarity=0.772 Sum_probs=10.2
Q ss_pred cchhhhhHHHHHH
Q 010486 382 VCSACEMAVVWVQ 394 (509)
Q Consensus 382 ~~~~~~~~~~~~~ 394 (509)
.|++|++-|.-++
T Consensus 15 kcaaceqkiaale 27 (32)
T 4g1a_A 15 KCAACEQKIAALE 27 (32)
T ss_dssp HTSSHHHHHHHHC
T ss_pred HHHHHHHHHHHHH
Confidence 4999998887653
No 82
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=22.93 E-value=82 Score=28.66 Aligned_cols=30 Identities=23% Similarity=0.276 Sum_probs=25.2
Q ss_pred EEEEEEeCCCCceEEEEEeCCCCcEEEeCCCC
Q 010486 85 YFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC 116 (509)
Q Consensus 85 Y~~~i~IGtPpQ~~~v~lDTGSs~~WV~~~~C 116 (509)
=.+++.||. |.+..++|||.+++-+...+.
T Consensus 113 P~~~iki~G--q~~e~LlDTGAD~TVl~~~~l 142 (203)
T 3ka2_A 113 PLVTIRIGG--QLKEALLDTGADDTVIEELNL 142 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEECSCCC
T ss_pred CcEEEEECC--EEEeeeecccCCceeeecccC
Confidence 367899998 999999999999999965443
No 83
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=21.48 E-value=80 Score=30.43 Aligned_cols=43 Identities=16% Similarity=0.064 Sum_probs=27.9
Q ss_pred cceEEEecCCcCCcEEEEEEeeeEEECCeeeeeecCCceEEEcCCCcCcccCHH
Q 010486 251 GKHTYVPVTKKGYWQVNKFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTP 304 (509)
Q Consensus 251 g~l~~~pv~~~~~w~~~~v~l~~i~v~~~~~~~~~~~~~~iiDTGTs~i~lp~~ 304 (509)
|.+.-.+...+..|. + .|.||.- .....++||||++.+.+|..
T Consensus 4 ~~v~~~~~~~~~~Y~---~---~i~iGTP-----~q~~~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 4 GTVPMTDYGNDIEYY---G---QVTIGTP-----GKKFNLDFDTGSSDLWIAST 46 (325)
T ss_dssp TEEEEEEETTTTEEE---E---EEEETTT-----TEEEEEEEETTCCCCEEEBT
T ss_pred CceeeeecCCCCEEE---E---EEEECCC-----CeEEEEEEcCCCCCEEEccC
Confidence 344444544555565 3 5678732 22347999999999999864
Done!