Query 010493
Match_columns 509
No_of_seqs 206 out of 634
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 07:59:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010493.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010493hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1uk5a_ a.7.7.1 (A:) BAG-famil 12.8 60 0.0043 25.2 2.9 8 59-66 20-27 (111)
2 d1rw1a_ c.47.1.12 (A:) Hypothe 10.2 51 0.0037 25.1 1.7 27 375-401 4-31 (114)
3 d1kqfc_ f.21.1.1 (C:) Formate 8.4 58 0.0042 27.5 1.5 46 444-492 160-206 (216)
4 d2fcra_ c.23.5.1 (A:) Flavodox 8.0 83 0.006 25.9 2.2 23 376-398 98-120 (173)
5 d1j9ba_ c.47.1.12 (A:) Arsenat 7.9 96 0.007 24.5 2.5 28 374-401 3-31 (138)
6 d1z3ea1 c.47.1.12 (A:1-114) Re 7.7 83 0.0061 23.9 2.0 28 374-401 3-31 (114)
7 d1j8ca_ d.15.1.1 (A:) Ubiquiti 7.4 2E+02 0.014 21.1 4.2 31 35-65 2-32 (103)
8 d1nm3a1 c.47.1.1 (A:166-239) C 7.3 68 0.005 22.1 1.2 23 375-397 9-31 (74)
9 d1r7ha_ c.47.1.1 (A:) Glutared 6.8 87 0.0064 21.4 1.6 23 375-397 5-27 (74)
10 d1egoa_ c.47.1.1 (A:) Glutared 6.5 69 0.0051 22.8 0.9 21 375-395 5-25 (85)
No 1
>d1uk5a_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=12.76 E-value=60 Score=25.22 Aligned_cols=8 Identities=25% Similarity=0.617 Sum_probs=3.1
Q ss_pred CCCCCCCC
Q 010493 59 PPAPTPTP 66 (509)
Q Consensus 59 ~~~~~~~~ 66 (509)
.++|++.|
T Consensus 20 ~~~p~~~P 27 (111)
T d1uk5a_ 20 AETPPKHP 27 (111)
T ss_dssp SSSCCCCH
T ss_pred cCCCCCCc
Confidence 33444333
No 2
>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=10.20 E-value=51 Score=25.14 Aligned_cols=27 Identities=11% Similarity=0.259 Sum_probs=23.7
Q ss_pred hcCCchhHhHHHHHHHHhhcCCc-ceec
Q 010493 375 AYGKGFVQASQDTWALFERQEME-PIVD 401 (509)
Q Consensus 375 i~G~~F~~Sak~a~~L~~~n~~~-alv~ 401 (509)
+||.+=|.++|+|.++++.++.. ..++
T Consensus 4 iY~~p~Cs~srka~~~L~~~~i~~~~id 31 (114)
T d1rw1a_ 4 LYGIKACDTMKKARTWLDEHKVAYDFHD 31 (114)
T ss_dssp EEECSSCHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEECCCChHHHHHHHHHHHcCCCeEEEE
Confidence 79999999999999999999987 4444
No 3
>d1kqfc_ f.21.1.1 (C:) Formate dehydrogenase N, cytochrome (gamma) subunit {Escherichia coli [TaxId: 562]}
Probab=8.40 E-value=58 Score=27.47 Aligned_cols=46 Identities=7% Similarity=-0.028 Sum_probs=34.1
Q ss_pred HHHHHHHHHhhhhhHH-HHHHHHhHHhcccCCCCcccCCchhHHHHHHhc
Q 010493 444 FIIGYLMTRIAMALPQ-ACVSCYYVCYAQNPDNRLFDSTIKDRLSLMKAG 492 (509)
Q Consensus 444 ~~i~y~i~~~f~~v~~-~~VdTifvCyaeDpe~~~~~~~~p~~~~~l~~~ 492 (509)
.++++++.++++++.. ..+++.+-.|.+..+ .++.||+=++|+++.
T Consensus 160 l~~~~vi~Hvy~a~~~~~~l~~M~tG~v~~~~---~~~~h~~w~~~~~~~ 206 (216)
T d1kqfc_ 160 ILIHAILIHMYMAFWVKGSIKGMIEGKVSRRW---AKKHHPRWYREIEKA 206 (216)
T ss_dssp HHHHHHHHHHHHHHHBTTHHHHHHTCEEEHHH---HHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccccccchhheeeccHHH---HHHHHHHHHHHHHhc
Confidence 3456666677766533 577888888887777 688999999999865
No 4
>d2fcra_ c.23.5.1 (A:) Flavodoxin {Chondrus crispus [TaxId: 2769]}
Probab=7.97 E-value=83 Score=25.87 Aligned_cols=23 Identities=26% Similarity=0.530 Sum_probs=19.9
Q ss_pred cCCchhHhHHHHHHHHhhcCCcc
Q 010493 376 YGKGFVQASQDTWALFERQEMEP 398 (509)
Q Consensus 376 ~G~~F~~Sak~a~~L~~~n~~~a 398 (509)
|++.||+|+++-.+.++++|...
T Consensus 98 y~~~F~~a~~~l~~~l~~~GA~~ 120 (173)
T d2fcra_ 98 YPDNFCDAIEEIHDCFAKQGAKP 120 (173)
T ss_dssp CTTSTTTHHHHHHHHHHHTTCEE
T ss_pred chhhHHHHHHHHHHHHHhCCCEE
Confidence 56899999999999999988653
No 5
>d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}
Probab=7.86 E-value=96 Score=24.49 Aligned_cols=28 Identities=18% Similarity=0.246 Sum_probs=24.0
Q ss_pred HhcCCchhHhHHHHHHHHhhcCCc-ceec
Q 010493 374 AAYGKGFVQASQDTWALFERQEME-PIVD 401 (509)
Q Consensus 374 Ai~G~~F~~Sak~a~~L~~~n~~~-alv~ 401 (509)
-+||.+=|..+|+|.++++.++.. ..++
T Consensus 3 ~iY~~p~Cs~srkal~~L~~~~i~~~~id 31 (138)
T d1j9ba_ 3 TIYHNPACGTSRNTLEMIRNSGTEPTIIL 31 (138)
T ss_dssp EEECCTTCHHHHHHHHHHHHTTCCCEEEC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCCeEEEe
Confidence 378999999999999999999987 4444
No 6
>d1z3ea1 c.47.1.12 (A:1-114) Regulatory protein Spx {Bacillus subtilis [TaxId: 1423]}
Probab=7.65 E-value=83 Score=23.88 Aligned_cols=28 Identities=14% Similarity=0.171 Sum_probs=23.9
Q ss_pred HhcCCchhHhHHHHHHHHhhcCCc-ceec
Q 010493 374 AAYGKGFVQASQDTWALFERQEME-PIVD 401 (509)
Q Consensus 374 Ai~G~~F~~Sak~a~~L~~~n~~~-alv~ 401 (509)
-+||.+=|.++|+|.+.++.++.. ..++
T Consensus 3 ~ly~~~~C~~~rka~~~L~~~~i~~~~~d 31 (114)
T d1z3ea1 3 TLYTSPSCTSCRKARAWLEEHEIPFVERN 31 (114)
T ss_dssp EEEECTTCHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEcCCCCHHHHHHHHHHHHCCCCeEEEe
Confidence 478999999999999999999987 4444
No 7
>d1j8ca_ d.15.1.1 (A:) Ubiquitin-like N-terminal domain of PLIC-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.39 E-value=2e+02 Score=21.09 Aligned_cols=31 Identities=19% Similarity=0.270 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 010493 35 SRQAPRIATPPPSQPSRPRSISTSPPAPTPT 65 (509)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (509)
..+..-+.||.|+..+..++++..+++++..
T Consensus 2 ~~~~~ss~pp~~s~~~~~~~~~~~~~~~~~~ 32 (103)
T d1j8ca_ 2 AENGESSGPPRPSRGPAAAQGSAAAPAEPKI 32 (103)
T ss_dssp CCSCCCCCCCSSCCCSCCCCCSSSCCCCCCC
T ss_pred CccCccCCCCCCCCCCCCCCCCCCCCCCCCe
No 8
>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}
Probab=7.33 E-value=68 Score=22.11 Aligned_cols=23 Identities=9% Similarity=0.063 Sum_probs=0.0
Q ss_pred hcCCchhHhHHHHHHHHhhcCCc
Q 010493 375 AYGKGFVQASQDTWALFERQEME 397 (509)
Q Consensus 375 i~G~~F~~Sak~a~~L~~~n~~~ 397 (509)
||+++.|.=+++|-+|+.+++..
T Consensus 9 iYs~~~C~~C~~ak~lL~~~~i~ 31 (74)
T d1nm3a1 9 IFTKPGCPFCAKAKQLLHDKGLS 31 (74)
T ss_dssp EEECSSCHHHHHHHHHHHHHTCC
T ss_pred EEECCCCHHHHHHHHHHHHcCCC
No 9
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=6.81 E-value=87 Score=21.39 Aligned_cols=23 Identities=17% Similarity=0.169 Sum_probs=0.0
Q ss_pred hcCCchhHhHHHHHHHHhhcCCc
Q 010493 375 AYGKGFVQASQDTWALFERQEME 397 (509)
Q Consensus 375 i~G~~F~~Sak~a~~L~~~n~~~ 397 (509)
+|+++.|.=++++-+++++++..
T Consensus 5 iYt~~~C~~C~~ak~~L~~~~i~ 27 (74)
T d1r7ha_ 5 LYTKPACVQCTATKKALDRAGLA 27 (74)
T ss_dssp EEECTTCHHHHHHHHHHHHTTCC
T ss_pred EEeCCCChhHHHHHHHHHHcCCc
No 10
>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli [TaxId: 562]}
Probab=6.53 E-value=69 Score=22.77 Aligned_cols=21 Identities=14% Similarity=0.131 Sum_probs=0.0
Q ss_pred hcCCchhHhHHHHHHHHhhcC
Q 010493 375 AYGKGFVQASQDTWALFERQE 395 (509)
Q Consensus 375 i~G~~F~~Sak~a~~L~~~n~ 395 (509)
||+++.|.-+++|-+|+.+++
T Consensus 5 iysk~~Cp~C~~aK~ll~~~~ 25 (85)
T d1egoa_ 5 IFGRSGCPYCVRAKDLAEKLS 25 (85)
T ss_dssp EECCTTSTHHHHHHHHHHHHH
T ss_pred EEeCCCCHhHHHHHHHHHHcC
Done!