Query 010494
Match_columns 509
No_of_seqs 132 out of 1441
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 08:01:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010494.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010494hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 2E-109 7E-114 894.1 45.8 470 30-503 1-471 (547)
2 1we3_A CPN60(groel); chaperoni 100.0 1E-108 5E-113 888.6 49.6 470 30-503 1-471 (543)
3 3rtk_A 60 kDa chaperonin 2; he 100.0 4E-110 1E-114 897.7 36.2 468 30-503 1-469 (546)
4 1iok_A Chaperonin 60; chaperon 100.0 8E-110 3E-114 897.9 37.4 471 30-504 2-473 (545)
5 3p9d_C T-complex protein 1 sub 100.0 3.3E-93 1.1E-97 773.5 35.2 447 4-503 1-530 (590)
6 3ko1_A Chaperonin; 9-fold symm 100.0 1.8E-89 6.2E-94 742.0 44.1 417 5-504 13-477 (553)
7 1q3q_A Thermosome alpha subuni 100.0 1.5E-89 5.3E-94 743.0 40.9 420 1-503 1-469 (548)
8 3ruv_A Chaperonin, CPN; double 100.0 5.9E-89 2E-93 737.8 41.5 415 6-504 4-463 (543)
9 1a6d_B Thermosome (beta subuni 100.0 1.8E-88 6.2E-93 734.5 41.9 416 5-503 4-467 (543)
10 1a6d_A Thermosome (alpha subun 100.0 1.6E-88 5.3E-93 734.8 40.1 413 7-503 7-466 (545)
11 3iyg_H T-complex protein 1 sub 100.0 1.7E-87 5.7E-92 722.2 45.2 403 40-503 10-458 (515)
12 3p9d_G T-complex protein 1 sub 100.0 5.6E-89 1.9E-93 738.4 31.8 422 1-503 1-471 (550)
13 3p9d_A T-complex protein 1 sub 100.0 1.6E-88 5.4E-93 736.1 35.2 412 31-503 16-480 (559)
14 3iyg_B T-complex protein 1 sub 100.0 8.9E-87 3E-91 716.8 45.2 403 34-503 5-455 (513)
15 3p9d_D T-complex protein 1 sub 100.0 6.8E-88 2.3E-92 727.2 34.6 412 31-504 11-473 (528)
16 3iyg_A T-complex protein 1 sub 100.0 1.6E-86 5.4E-91 717.3 43.4 408 35-503 6-464 (529)
17 3iyg_E T-complex protein 1 sub 100.0 7.7E-86 2.6E-90 710.3 45.8 405 33-503 4-458 (515)
18 3p9d_E T-complex protein 1 sub 100.0 2.9E-86 9.9E-91 718.8 39.9 412 32-503 38-501 (562)
19 3iyg_G T-complex protein 1 sub 100.0 2.1E-85 7.1E-90 706.4 45.4 400 40-503 8-457 (515)
20 3iyg_D T-complex protein 1 sub 100.0 2.6E-85 8.9E-90 706.1 44.4 402 36-503 8-462 (518)
21 3p9d_B T-complex protein 1 sub 100.0 1.3E-86 4.6E-91 718.0 30.7 406 31-503 9-462 (527)
22 3iyg_Q T-complex protein 1 sub 100.0 1.8E-84 6.3E-89 699.1 44.0 399 40-503 10-454 (512)
23 3p9d_H T-complex protein 1 sub 100.0 2.7E-85 9.1E-90 712.1 36.0 416 7-504 10-482 (568)
24 3iyg_Z T-complex protein 1 sub 100.0 6.9E-84 2.3E-88 694.4 42.0 402 35-503 6-461 (517)
25 3p9d_F T-complex protein 1 sub 100.0 3.6E-84 1.2E-88 701.3 26.0 402 36-503 14-476 (546)
26 3aq1_B Thermosome subunit; gro 100.0 7.4E-78 2.5E-82 645.6 34.5 371 69-503 1-420 (500)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 1.7E-47 5.9E-52 349.8 14.8 193 216-408 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 3.7E-46 1.3E-50 341.6 15.6 190 218-407 11-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 1.8E-35 6.2E-40 258.5 13.7 144 221-364 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 9.7E-23 3.3E-27 189.3 13.7 133 212-368 1-161 (178)
31 1ass_A Thermosome; chaperonin, 99.8 2.4E-19 8.2E-24 163.3 13.4 127 219-368 1-154 (159)
32 3o0m_A HIT family protein; ssg 25.1 1.4E+02 0.0048 25.3 6.4 47 40-86 58-117 (149)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=2.2e-109 Score=894.06 Aligned_cols=470 Identities=44% Similarity=0.766 Sum_probs=458.4
Q ss_pred cchhhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhhhccccccCcccchHhHHHHHHHH
Q 010494 30 MVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGA 109 (509)
Q Consensus 30 ~~k~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~ 109 (509)
++|.|.|| +++|++|+.||..|+++|++||||+||||||++++|+|+|||||+||+|+|+++||+|||||+|++++|+
T Consensus 1 ~~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~ 78 (547)
T 1kp8_A 1 AAKDVKFG--NDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVAS 78 (547)
T ss_dssp CCEEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred CCcccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHH
Confidence 36899999 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccCcH-HHHHHhhhhcCCchhhh
Q 010494 110 RTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVEDH-ELADVAAVSAGNDYTVG 188 (509)
Q Consensus 110 ~~d~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~ 188 (509)
+||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++. .|.++|++|+++++.|+
T Consensus 79 ~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~ 158 (547)
T 1kp8_A 79 KANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVG 158 (547)
T ss_dssp HHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHH
T ss_pred hhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999876 89999999999999999
Q ss_pred hHHHHHHHhhccCCcEEEecCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEeecccCCCHHHHHHHHHH
Q 010494 189 KMISDALQQVGRNGVVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDS 268 (509)
Q Consensus 189 ~li~~Ai~~v~~~g~I~v~~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~ 268 (509)
++++||+.+++++|.|++++|++++|++++++|++|+++|.||||.+++++|+++++||+|+++|++|++++++.+++++
T Consensus 159 ~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~ 238 (547)
T 1kp8_A 159 KLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEA 238 (547)
T ss_dssp HHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHH
T ss_pred HHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCeEEEeccchHHHHHHHHHhcccccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCc
Q 010494 269 AVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT 348 (509)
Q Consensus 269 i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~ 348 (509)
+.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++.+|+|||++|||+++++++|++++++++++||+
T Consensus 239 i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~ 318 (547)
T 1kp8_A 239 VAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQ 318 (547)
T ss_dssp HHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEE
T ss_pred HHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCeEEEEecCCChhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHH
Q 010494 349 AIKVVITKDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDA 428 (509)
Q Consensus 349 ~~~i~v~~~~~~~~~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dA 428 (509)
|+.|++++++|++|+||++++.+++|+++++.+++.++++|+||+|+||+++|+|++|||+|||+|+.+++|++|+++||
T Consensus 319 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DA 398 (547)
T 1kp8_A 319 AKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDA 398 (547)
T ss_dssp EEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred eeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCccccCchhHHHHHHHHHhHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 429 LNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 429 l~a~~~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
||++|+++++|+|||||++|++++.+|++++. .++.+| +++++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 399 l~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~~q-~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~ 471 (547)
T 1kp8_A 399 LHATRAAVEEGVVAGGGVALIRVASKLADLRG-QNADQN-VGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG 471 (547)
T ss_dssp HHHHHHHHHHCEEETTTHHHHHHHHHTTTCCC-SSHHHH-HHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS
T ss_pred HHHHHHhccCCEEeCCcHHHHHHHHHHHHHhc-cCchHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 99999999999999999999999999998875 555555 69999999999999999999999999999999875
No 2
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.5e-108 Score=888.60 Aligned_cols=470 Identities=47% Similarity=0.779 Sum_probs=458.4
Q ss_pred cchhhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhhhccccccCcccchHhHHHHHHHH
Q 010494 30 MVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGA 109 (509)
Q Consensus 30 ~~k~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~ 109 (509)
|+|.|.|| +++|++|+.||..|+++|++||||+||||||++++|+|+|||||+||+|+|+++||+|||||+|++++|+
T Consensus 1 ~~k~~~~g--~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~ 78 (543)
T 1we3_A 1 MAKILVFD--EAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVAS 78 (543)
T ss_dssp -CEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred CCcccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHH
Confidence 57999999 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccCcH-HHHHHhhhhcCCchhhh
Q 010494 110 RTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVEDH-ELADVAAVSAGNDYTVG 188 (509)
Q Consensus 110 ~~d~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~ 188 (509)
+||+++||||||+|+||++||+++.+++++|+||+.|++||++|++.++++|+++++++++. .|.++|++|++ ++.|+
T Consensus 79 ~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~ 157 (543)
T 1we3_A 79 KTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVG 157 (543)
T ss_dssp HHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHH
T ss_pred hhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999876 89999999998 89999
Q ss_pred hHHHHHHHhhccCCcEEEecCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEeecccCCCHHHHHHHHHH
Q 010494 189 KMISDALQQVGRNGVVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDS 268 (509)
Q Consensus 189 ~li~~Ai~~v~~~g~I~v~~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~ 268 (509)
++++||+.+++++|.|++++|++++|++++++|++|+++|.||||.+++++|+++++||+|+++|++|++++++.+++++
T Consensus 158 ~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~ 237 (543)
T 1we3_A 158 KLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQ 237 (543)
T ss_dssp HHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCeEEEeccchHHHHHHHHHhcccccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCc
Q 010494 269 AVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT 348 (509)
Q Consensus 269 i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~ 348 (509)
+.+.|+||||++++|+++++++|+.|+++|.++|+|||+|+||++++.+|+|||++|||+++++++|++++++++++||+
T Consensus 238 i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~ 317 (543)
T 1we3_A 238 VAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGR 317 (543)
T ss_dssp HHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEE
T ss_pred HHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred ceEEEEecCeEEEEecCCChhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHH
Q 010494 349 AIKVVITKDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDA 428 (509)
Q Consensus 349 ~~~i~v~~~~~~~~~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dA 428 (509)
|+.|++++++|++|+||++++.+.+|+++++.+++.++++|++++|+||+++|+|++|||+|||+|+.+++|++|+++||
T Consensus 318 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DA 397 (543)
T 1we3_A 318 AERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDA 397 (543)
T ss_dssp EEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCccccCchhHHHHHHHHHhHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 429 LNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 429 l~a~~~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
||++|+++++|+|||||++|++++.+|++++.+.++.+| +++++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 398 l~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~ 471 (543)
T 1we3_A 398 LNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEA-TGAKIVRRALEEPARQIAENAGYEGSVIVQQILAE 471 (543)
T ss_dssp HHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHH-HHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHC
T ss_pred HHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence 999999999999999999999999999999876666666 59999999999999999999999999999999974
No 3
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=4e-110 Score=897.65 Aligned_cols=468 Identities=45% Similarity=0.761 Sum_probs=388.4
Q ss_pred cchhhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhhhccccccCcccchHhHHHHHHHH
Q 010494 30 MVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGA 109 (509)
Q Consensus 30 ~~k~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~ 109 (509)
|+|.|.|| ++||+.|+.|++.|+++|++||||+||||||+++.|+|+|||||+||+|+|+++||++||||+|++++|+
T Consensus 1 ~~k~~~~~--~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~ 78 (546)
T 3rtk_A 1 MAKTIAYD--EEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAK 78 (546)
T ss_dssp --------------------------------------------------------------CCCHHHHHHHHHHHHHHT
T ss_pred CCceeecc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHH
Confidence 68999999 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccCcH-HHHHHhhhhcCCchhhh
Q 010494 110 RTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVEDH-ELADVAAVSAGNDYTVG 188 (509)
Q Consensus 110 ~~d~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~ 188 (509)
+||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++. .|.++|++|++ ++.++
T Consensus 79 ~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~ 157 (546)
T 3rtk_A 79 KTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIG 157 (546)
T ss_dssp SCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHH
T ss_pred hhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHH
Confidence 99999999999999999999999999999999999999999999999999999999999877 89999999998 88999
Q ss_pred hHHHHHHHhhccCCcEEEecCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEeecccCCCHHHHHHHHHH
Q 010494 189 KMISDALQQVGRNGVVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDS 268 (509)
Q Consensus 189 ~li~~Ai~~v~~~g~I~v~~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~ 268 (509)
++++||+.+++.+|.|+++.+....+.+++++|++|+++|.||||.+++++|+++++||+|+++|++|++++++.+++++
T Consensus 158 ~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~ 237 (546)
T 3rtk_A 158 DLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEK 237 (546)
T ss_dssp HHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHH
T ss_pred HHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHH
Confidence 99999999999999999887766654459999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCeEEEeccchHHHHHHHHHhcccccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCc
Q 010494 269 AVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT 348 (509)
Q Consensus 269 i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~ 348 (509)
+.+.|+|||||+++|+++++++|+.|+++|+++|+|||+|+||+.++.+|+|||++|||+++++++|++++++++++||+
T Consensus 238 I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~ 317 (546)
T 3rtk_A 238 VIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGK 317 (546)
T ss_dssp HHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEE
T ss_pred HHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCeEEEEecCCChhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHH
Q 010494 349 AIKVVITKDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDA 428 (509)
Q Consensus 349 ~~~i~v~~~~~~~~~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dA 428 (509)
|+.|++++++|++|+||++++.++.|+++|++++++++++|++++|+||+++|+|++|||+|||+|+.+++|++|+++||
T Consensus 318 a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DA 397 (546)
T 3rtk_A 318 ARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDA 397 (546)
T ss_dssp EEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHH
T ss_pred eEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCccccCchhHHHHHHHHHhHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 429 LNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 429 l~a~~~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
||++|+++++|+|||||++|++++.+|++++ .++.+| +++++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 398 l~a~r~av~~giVpGGGa~e~~~s~~L~~~~--~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~ 469 (546)
T 3rtk_A 398 VRNAKAAVEEGIVAGGGVTLLQAAPTLDELK--LEGDEA-TGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL 469 (546)
T ss_dssp HHHHHHHHHHCEEETTTHHHHTTGGGSTTSC--CCTTHH-HHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS
T ss_pred HHHHHHHHhCCcccCCcHHHHHHHHHHHHhc--cccHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh
Confidence 9999999999999999999999999999887 566666 59999999999999999999999999999999885
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=8.3e-110 Score=897.88 Aligned_cols=471 Identities=46% Similarity=0.781 Sum_probs=417.3
Q ss_pred cchhhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhhhccccccCcccchHhHHHHHHHH
Q 010494 30 MVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGA 109 (509)
Q Consensus 30 ~~k~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~ 109 (509)
|+|.|.|| +++|++|+.||..|+++|++||||+||||||++++|+|+|||||+||+|+|+++||+|||||+|++++|+
T Consensus 2 ~~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~ 79 (545)
T 1iok_A 2 AAKEVKFN--SDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVAS 79 (545)
T ss_dssp CCEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred Cchhhhcc--HHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHH
Confidence 68999999 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccCcH-HHHHHhhhhcCCchhhh
Q 010494 110 RTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVEDH-ELADVAAVSAGNDYTVG 188 (509)
Q Consensus 110 ~~d~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~-~l~~va~ts~~~~~~l~ 188 (509)
+||+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|+++. .|.++|++|+++++.|+
T Consensus 80 ~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~ 159 (545)
T 1iok_A 80 RTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIG 159 (545)
T ss_dssp HGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHH
T ss_pred hhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999876 89999999999999999
Q ss_pred hHHHHHHHhhccCCcEEEecCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEeecccCCCHHHHHHHHHH
Q 010494 189 KMISDALQQVGRNGVVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDS 268 (509)
Q Consensus 189 ~li~~Ai~~v~~~g~I~v~~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~ 268 (509)
++++||+.+++++|.|++++|++++|++++++|++|+++|.||||.+++++|+++++||+|+++|++|++++++.+++++
T Consensus 160 ~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~ 239 (545)
T 1iok_A 160 QQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLES 239 (545)
T ss_dssp HHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-------
T ss_pred HHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCeEEEeccchHHHHHHHHHhcccccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCc
Q 010494 269 AVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT 348 (509)
Q Consensus 269 i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~ 348 (509)
+.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++.+|+|||++|||+++++++|++++++++++||+
T Consensus 240 i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~ 319 (545)
T 1iok_A 240 VIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGR 319 (545)
T ss_dssp ----CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEE
T ss_pred HHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999998999999999999999
Q ss_pred ceEEEEecCeEEEEecCCChhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHH
Q 010494 349 AIKVVITKDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDA 428 (509)
Q Consensus 349 ~~~i~v~~~~~~~~~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dA 428 (509)
|+.|++++++|++|+||++++.+++|+++++++++.++++|+|++|+||+++|+|++|||+|||+|+.+++|++|+++||
T Consensus 320 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DA 399 (545)
T 1iok_A 320 AKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDA 399 (545)
T ss_dssp EEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCccccCchhHHHHHHHHHhHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccc
Q 010494 429 LNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAHK 504 (509)
Q Consensus 429 l~a~~~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~~ 504 (509)
||++|+++++|+|||||++|++++.+|++++. .++.+| +++++|++||+.||++||+|||+|+.+++.+|++.+
T Consensus 400 l~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~ 473 (545)
T 1iok_A 400 LNATRAAVQEGIVVGGGVALVQGAKVLEGLSG-ANSDQD-AGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESS 473 (545)
T ss_dssp HHHHHHHHHHCEEETTTHHHHHHGGGGGSCCC-SSHHHH-HHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCC
T ss_pred HHHHHHHhhcCCCCCchHHHHHHHHHHHHHhc-cCchHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc
Confidence 99999999999999999999999999998875 555555 699999999999999999999999999999999764
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=3.3e-93 Score=773.46 Aligned_cols=447 Identities=19% Similarity=0.297 Sum_probs=379.0
Q ss_pred CCcceEEecCCCCCCCCCCCCCcccccchhhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccch
Q 010494 4 LSTPIFAISFKNPTLPKRAPNSVPRAMVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDG 83 (509)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG 83 (509)
|..|+++++++.++.+ | .+||..|+.||..|+++|++||||+||||||+++.|+|+|||||
T Consensus 1 ~~~~~~~~~~~~~~~~-----------------g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG 61 (590)
T 3p9d_C 1 MQAPVVFMNASQERTT-----------------G--RQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDG 61 (590)
T ss_dssp -----CCSCTTCCBCT-----------------T--HHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCH
T ss_pred CCCCeEeecCCcchhh-----------------H--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCH
Confidence 6789999999988877 6 89999999999999999999999999999999999999999999
Q ss_pred hhhhccccccCcccchHhHHHHHHHHhhhhhcCCCcchHHhHHHHHHHHHHHH-HhcCCChHHHHHHHHHHHHHHHHHHH
Q 010494 84 ETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKV-IAAGMNPVQIARGIEKTSKALLSELK 162 (509)
Q Consensus 84 ~tIlk~i~~~~p~~~~ga~ll~~~a~~~d~~~GDGTTt~viLa~~Ll~~~~~l-i~~Gi~p~~I~~G~~~a~~~~l~~L~ 162 (509)
+||+|+|+++||+ |+|++++|++||+++||||||+||||++||+++.++ +.+|+||+.|++||++|++.++++|+
T Consensus 62 ~TIlk~i~~~hP~----Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~ 137 (590)
T 3p9d_C 62 HAILREIDVAHPA----AKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIK 137 (590)
T ss_dssp HHHHHHSCCCCHH----HHTHHHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCHH----HHHHHHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred hcCcccCc--H-HHHHHhhhhcCC------chhhhhHHHHHHHhhccCCc------------------EEEecCCCcccc
Q 010494 163 LTSREVED--H-ELADVAAVSAGN------DYTVGKMISDALQQVGRNGV------------------VTIEKGKCTENS 215 (509)
Q Consensus 163 ~~s~~v~~--~-~l~~va~ts~~~------~~~l~~li~~Ai~~v~~~g~------------------I~v~~g~~~~ds 215 (509)
+++++++. . .|.++|+||+++ ++.|+++++||+.++++++. |...+|+++.|+
T Consensus 138 ~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds 217 (590)
T 3p9d_C 138 QVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS 217 (590)
T ss_dssp HHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC
T ss_pred HHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc
Confidence 99999874 3 899999998754 68999999999999987642 233579999998
Q ss_pred eEEeeceEEeccCCCCccccCcCCceeEeeceeeEeeccc-------------CCCHHHHHHHH-----------HHHHh
Q 010494 216 LEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK-------------IKNPKDMFKIL-----------DSAVK 271 (509)
Q Consensus 216 ~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~-------------i~~~~~l~~~l-----------e~i~~ 271 (509)
++++|++|++++.+| +|+++++||||+++|++ |++++++.+++ +++.+
T Consensus 218 -~lv~Gmvfdk~~~~~-------~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~ 289 (590)
T 3p9d_C 218 -RVLKGVLLNKDVVHP-------KMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILA 289 (590)
T ss_dssp -BCCSSEEECCCCSCT-------TSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -eeeeEEEEecccCCC-------CCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998876 47889999999999984 45667766655 67888
Q ss_pred cCCCeEEEeccchHHHHHHHHHhcccccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCc-ce
Q 010494 272 EKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT-AI 350 (509)
Q Consensus 272 ~~~~lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~-~~ 350 (509)
.|++|||++++|+++++++|..++ |+| |+++++.+|+|||++|||++++ +++++++++||+ |+
T Consensus 290 ~g~~vII~e~~I~d~Al~~L~k~~------I~a-----v~~~~k~~le~ia~~TGa~iis-----~l~~~~~~~LG~~a~ 353 (590)
T 3p9d_C 290 VRPTLVITEKGVSDLAQHYLLKGG------CSV-----LRRVKKSDNNRIARVTGATIVN-----RVEDLKESDVGTNCG 353 (590)
T ss_dssp TCCSEECCSSCCCTHHHHHHHHTT------CCC-----CCCCCHHHHHHHHHHHTCCCCS-----CSTTCCTTSCBCCCS
T ss_pred cCCcEEEecCCcCHHHHHHHHhcc------cee-----eccCCHHHHHHHHHHhCCceee-----cccCCCHHHhCCcCC
Confidence 999999999999999999998874 555 4588999999999999999999 689999999999 99
Q ss_pred EEE---EecCeEEEEecCCChhH--------------------------HHHHHHHHHHHHhhhhHHHHHHHHHHHHhhh
Q 010494 351 KVV---ITKDSTLIVTDGSTRAA--------------------------VEKRISEIRSLAEITEERFQKNILNERIARL 401 (509)
Q Consensus 351 ~i~---v~~~~~~~~~g~~~~~~--------------------------i~~ri~~l~~~~~~~~~~~~~~~l~~r~~~l 401 (509)
.|+ +++++|++|+||++++. |++|+++++.+++.++++|+++ +++|
T Consensus 354 ~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l 428 (590)
T 3p9d_C 354 LFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHG 428 (590)
T ss_dssp EEECCEETTEECEEECC--------------------------------------------------------------C
T ss_pred EEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhh
Confidence 997 47899999999999988 9999999999999999999966 4789
Q ss_pred cCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhhC-ccccCchhHHHHHHHHHhHhccCCcHHHHHHHHHHHHHHHH
Q 010494 402 SGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSY 480 (509)
Q Consensus 402 ~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~~q~~~~~~~~~AL~~ 480 (509)
+|++|||+|||+|+.+++|++|+++||||++|+++++| +|||||++|++++.+|++++...++.+|+ |+++|++||+.
T Consensus 429 ~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~-~i~~~a~ALe~ 507 (590)
T 3p9d_C 429 SGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQW-PYQAVADAMEC 507 (590)
T ss_dssp CCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHH-HHHHHHHHTTH
T ss_pred cCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHH-HHHHHHHHHHH
Confidence 99999999999999999999999999999999999995 99999999999999999988778887775 89999999999
Q ss_pred HHHHHHHHcCCChHHHHHHHhcc
Q 010494 481 PTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 481 ~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
||++||+|||+|+.+++.+|++.
T Consensus 508 ip~~La~NaG~d~~~vv~~l~~~ 530 (590)
T 3p9d_C 508 IPRTLIQNAGGDPIRLLSQLRAK 530 (590)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHH
Confidence 99999999999999999999874
No 6
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.8e-89 Score=741.99 Aligned_cols=417 Identities=21% Similarity=0.362 Sum_probs=374.0
Q ss_pred CcceEEecCCCCCCCCCCCCCcccccchhhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchh
Q 010494 5 STPIFAISFKNPTLPKRAPNSVPRAMVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGE 84 (509)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~ 84 (509)
.+|+++++++.++.+ | .+||..|+.||+.|+++|++||||+||||||+++.|+|+|||||+
T Consensus 13 ~~~~~~l~~~~~~~~-----------------g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~ 73 (553)
T 3ko1_A 13 GIPVIILKEGSSRTY-----------------G--KEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGA 73 (553)
T ss_dssp --------------------------------C--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHH
T ss_pred CCeEEEEecCcccch-----------------h--HHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCcc
Confidence 469999999877766 7 789999999999999999999999999999999999999999999
Q ss_pred hhhccccccCcccchHhHHHHHHHHhhhhhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhc
Q 010494 85 TVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLT 164 (509)
Q Consensus 85 tIlk~i~~~~p~~~~ga~ll~~~a~~~d~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~ 164 (509)
||||+|+++||+ |+|++++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++
T Consensus 74 tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~ 149 (553)
T 3ko1_A 74 TILDKMDLQHPA----AKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQEL 149 (553)
T ss_dssp HHHHSSCCCSHH----HHHHHHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred chhhhhhccChh----HHHHHHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHh
Confidence 999999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccC--cH-HHHHHhhhhcCC------chhhhhHHHHHHHhhccC--Cc-------EEEe--cCCCcccceEEeeceEE
Q 010494 165 SREVE--DH-ELADVAAVSAGN------DYTVGKMISDALQQVGRN--GV-------VTIE--KGKCTENSLEIVEGMRF 224 (509)
Q Consensus 165 s~~v~--~~-~l~~va~ts~~~------~~~l~~li~~Ai~~v~~~--g~-------I~v~--~g~~~~ds~~li~Gi~~ 224 (509)
+++++ +. .|.++|+||+++ ++.|+++++||+.+++++ |. |+++ +|+++.|+ ++++|++|
T Consensus 150 s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~ 228 (553)
T 3ko1_A 150 AQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVV 228 (553)
T ss_dssp CEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEE
T ss_pred cCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEe
Confidence 99987 55 899999999986 689999999999999985 65 6654 78898888 99999999
Q ss_pred eccCCCCccccCcCCceeEeeceeeEeecc-------------cCCCHHH-----------HHHHHHHHHhcCCCeEEEe
Q 010494 225 DRGFLSPYFVTDRQKRTVEFHDGKLLLVDK-------------KIKNPKD-----------MFKILDSAVKEKYPIVIVA 280 (509)
Q Consensus 225 ~~~~~~p~~~~~~~~~~~~~~~~kIll~d~-------------~i~~~~~-----------l~~~le~i~~~~~~lvi~~ 280 (509)
+++|.|||| +++++||||+++|+ .|+++++ +.++++++.+.|+||||++
T Consensus 229 dk~~~~~~m-------~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~ 301 (553)
T 3ko1_A 229 DKEVVHPGM-------PKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQ 301 (553)
T ss_dssp CSCBSCTTS-------CSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECS
T ss_pred cccccCCCC-------ccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEec
Confidence 999999974 66899999999998 4677777 4556789999999999999
Q ss_pred ccchHHHHHHHHHhcccccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEEEe---cC
Q 010494 281 EDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---KD 357 (509)
Q Consensus 281 ~~i~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v~---~~ 357 (509)
++|+++++++|..+ +|++|+ ++++.+|+|||++|||++++ +++++++++||+|+.|++. ++
T Consensus 302 ~~I~~~al~~L~~~------gI~~v~-----~v~k~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~d 365 (553)
T 3ko1_A 302 KGIDEVAQSYLAKK------GVLAVR-----RAKKSDLEKLARATGGRVVS-----NIDEISEQDLGYASLIEERKVGED 365 (553)
T ss_dssp SCBCSHHHHHHHHH------TCEEEC-----CCCHHHHHHHHTTTTCCEES-----CGGGCCSSSSEECSEEECCCCSSS
T ss_pred cChHHHHHHHHHhc------chhhhh-----hhhhhhHHHHHHhhCCeeec-----ccccCChhhcchHHHHHHhhcCcc
Confidence 99999999999865 467776 67899999999999999999 6899999999999999975 88
Q ss_pred eEEEEecCCChhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHh
Q 010494 358 STLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIE 437 (509)
Q Consensus 358 ~~~~~~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~ 437 (509)
+|+||+||+++ ..+||+|||+|+.+++|++|+++||||++|++++
T Consensus 366 ~~~~i~g~~~~-----------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~ 410 (553)
T 3ko1_A 366 KMVFVEGAKNP-----------------------------------KSISILIRGGLERLVDETERALRDALGTVADVIK 410 (553)
T ss_dssp CCEEEESCSSS-----------------------------------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEeccCCCC-----------------------------------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999876 3679999999999999999999999999999999
Q ss_pred hC-ccccCchhHHHHHHHHHhHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccc
Q 010494 438 EG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAHK 504 (509)
Q Consensus 438 ~g-vvpGGGa~e~~ls~~L~~~~~~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~~ 504 (509)
+| +|||||++|++++.+|++++...++.+|+ ++++|++||+.||++||+|||+|+.+++.+|++.+
T Consensus 411 ~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~-~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h 477 (553)
T 3ko1_A 411 DGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQL-AVEAYANALESLVSILIENAGFDPIDLLMKLRSTH 477 (553)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHHCSHHHH-HHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTT
T ss_pred cCceecCCceeEeHHHHHHHHhccccCChhHh-HHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 99 99999999999999999998878888875 89999999999999999999999999999998753
No 7
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1.5e-89 Score=743.05 Aligned_cols=420 Identities=23% Similarity=0.378 Sum_probs=383.2
Q ss_pred CCC-CCcceEEecCCCCCCCCCCCCCcccccchhhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEe
Q 010494 1 MAA-LSTPIFAISFKNPTLPKRAPNSVPRAMVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKI 79 (509)
Q Consensus 1 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~i 79 (509)
|++ |.+|+++++++.+ +.|| ++||..|+.|+..|+++|+|||||+||||||+++.|+++|
T Consensus 1 m~~~~~~~~~~l~~~~~-----------------~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~i 61 (548)
T 1q3q_A 1 MAQLSGQPVVILPEGTQ-----------------RYVG--RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVV 61 (548)
T ss_dssp --------CCCSCTTCE-----------------EEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEE
T ss_pred CCCcCCCCcccccCCcc-----------------eech--HHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEE
Confidence 666 7778877777633 4558 8999999999999999999999999999999999999999
Q ss_pred ccchhhhhccccccCcccchHhHHHHHHHHhhhhhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Q 010494 80 VNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLS 159 (509)
Q Consensus 80 TnDG~tIlk~i~~~~p~~~~ga~ll~~~a~~~d~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~ 159 (509)
||||+||+|+|+++||+ |+|++++|++||+++||||||+|+||++||+++.+++++|+||+.|++||++|++.+++
T Consensus 62 TnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~ 137 (548)
T 1q3q_A 62 TNDCATILDKIDLQHPA----AKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQE 137 (548)
T ss_dssp ESCHHHHHHHSCCCSHH----HHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHhhccchH----HHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCcccCc--H-HHHHHhhhhcCC------chhhhhHHHHHHHhhccC--C-------cEEEe--cCCCcccceEEe
Q 010494 160 ELKLTSREVED--H-ELADVAAVSAGN------DYTVGKMISDALQQVGRN--G-------VVTIE--KGKCTENSLEIV 219 (509)
Q Consensus 160 ~L~~~s~~v~~--~-~l~~va~ts~~~------~~~l~~li~~Ai~~v~~~--g-------~I~v~--~g~~~~ds~~li 219 (509)
+|++++++++. . .|.++|+|++++ ++.|+++++||+.+++++ | .|+++ +|++++|| +++
T Consensus 138 ~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv 216 (548)
T 1q3q_A 138 ILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELV 216 (548)
T ss_dssp HHHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEE
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEE
Confidence 99999999874 4 899999988654 589999999999999875 4 57665 99999999 999
Q ss_pred eceEEeccCCCCccccCcCCceeEeeceeeEeeccc-------------CCCHHHH-----------HHHHHHHHhcCCC
Q 010494 220 EGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK-------------IKNPKDM-----------FKILDSAVKEKYP 275 (509)
Q Consensus 220 ~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~-------------i~~~~~l-----------~~~le~i~~~~~~ 275 (509)
+|++|+++|.|||| +++++||||+++|++ |++++++ .++++++.+.|+|
T Consensus 217 ~G~v~dk~~~~~~m-------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~ 289 (548)
T 1q3q_A 217 RGVVIDKEVVHPRM-------PKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGAN 289 (548)
T ss_dssp SSEEESCCCSSTTS-------CSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred eeEEEeccCCCCCC-------cceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 99999999999985 567999999999998 7788886 6788999999999
Q ss_pred eEEEeccchHHHHHHHHHhcccccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEEEe
Q 010494 276 IVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT 355 (509)
Q Consensus 276 lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v~ 355 (509)
|||++++|+++++++|+.|+ |+||+ ++++++|+|||++|||++++ +++++++++||+|+.|++.
T Consensus 290 lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~ 353 (548)
T 1q3q_A 290 VVFVQKGIDDLAQHYLAKYG------IMAVR-----RVKKSDMEKLAKATGAKIVT-----NVKDLTPEDLGYAEVVEER 353 (548)
T ss_dssp EEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBS-----SGGGCCGGGCEEESEEEEE
T ss_pred EEEEcCCcCHHHHHHHHHCC------cEEEc-----cCCHHHHHHHHHHhCCeEec-----ccccCCHHHCCCceEEEEE
Confidence 99999999999999999884 68875 78899999999999999999 6899999999999999975
Q ss_pred ---cCeEEEEecCCChhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHH
Q 010494 356 ---KDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNAT 432 (509)
Q Consensus 356 ---~~~~~~~~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~ 432 (509)
+++|++|+||+++ ++|||+|||+|+.+++|++|+++|||+++
T Consensus 354 ~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~ 398 (548)
T 1q3q_A 354 KLAGENMIFVEGCKNP-----------------------------------KAVTILIRGGTEHVIDEVERALEDAVKVV 398 (548)
T ss_dssp EETTEEEEEEECCSSC-----------------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EecCceEEEEecCCCC-----------------------------------CeEEEEECCCChHHHHHHHHHHHHHHHHH
Confidence 8899999999754 58999999999999999999999999999
Q ss_pred HHHHhhC-ccccCchhHHHHHHHHHhHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 433 KAAIEEG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 433 ~~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
|+++++| +|||||++|++++.+|++++.+.++.+| +++++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 399 r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~ 469 (548)
T 1q3q_A 399 KDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEA-LAIENFADALKIIPKTLAENAGLDTVEMLVKVISE 469 (548)
T ss_dssp HHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHH-HHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 9999999 9999999999999999999877777676 58999999999999999999999999999999864
No 8
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=5.9e-89 Score=737.76 Aligned_cols=415 Identities=24% Similarity=0.361 Sum_probs=381.3
Q ss_pred cceEEecCCCCCCCCCCCCCcccccchhhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhh
Q 010494 6 TPIFAISFKNPTLPKRAPNSVPRAMVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGET 85 (509)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~t 85 (509)
+| ++++++.++.+ | .+||..|+.||+.|+++|++||||+||||||+++.|+|+|||||+|
T Consensus 4 ~p-~~l~~~~~~~~-----------------g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~t 63 (543)
T 3ruv_A 4 QP-GVLPENMKRYM-----------------G--RDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVT 63 (543)
T ss_dssp CC-CSSCSSEEEEE-----------------T--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHH
T ss_pred CC-eeecCCcchhc-----------------c--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHH
Confidence 56 66777655544 7 8899999999999999999999999999999999999999999999
Q ss_pred hhccccccCcccchHhHHHHHHHHhhhhhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcC
Q 010494 86 VLKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTS 165 (509)
Q Consensus 86 Ilk~i~~~~p~~~~ga~ll~~~a~~~d~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s 165 (509)
|||+|+++||+ |+|++++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++
T Consensus 64 Ilk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s 139 (543)
T 3ruv_A 64 ILREMSVEHPA----AKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIA 139 (543)
T ss_dssp HHHHSCCCCHH----HHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHccCcCHH----HHHHHHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccC--cH-HHHHHhhhhcCC------chhhhhHHHHHHHhhccC-Cc-----EEEe--cCCCcccceEEeeceEEeccC
Q 010494 166 REVE--DH-ELADVAAVSAGN------DYTVGKMISDALQQVGRN-GV-----VTIE--KGKCTENSLEIVEGMRFDRGF 228 (509)
Q Consensus 166 ~~v~--~~-~l~~va~ts~~~------~~~l~~li~~Ai~~v~~~-g~-----I~v~--~g~~~~ds~~li~Gi~~~~~~ 228 (509)
++++ +. .|.++|+||+++ ++.|+++++||+.+++++ |. |+++ +|+++.|+ ++++|++|+++|
T Consensus 140 ~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~ 218 (543)
T 3ruv_A 140 CEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKER 218 (543)
T ss_dssp EECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCC
T ss_pred CCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccc
Confidence 9987 45 899999999875 789999999999999987 64 6554 88898888 999999999999
Q ss_pred CCCccccCcCCceeEeeceeeEeeccc-------------CCCHHH-----------HHHHHHHHHhcCCCeEEEeccch
Q 010494 229 LSPYFVTDRQKRTVEFHDGKLLLVDKK-------------IKNPKD-----------MFKILDSAVKEKYPIVIVAEDIE 284 (509)
Q Consensus 229 ~~p~~~~~~~~~~~~~~~~kIll~d~~-------------i~~~~~-----------l~~~le~i~~~~~~lvi~~~~i~ 284 (509)
.|||| +++++||||+++|++ |+++++ +.++++++.+.|+||||++++|+
T Consensus 219 ~~~~m-------~~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~ 291 (543)
T 3ruv_A 219 VSAQM-------PKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGID 291 (543)
T ss_dssp SCTTS-------CSEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBC
T ss_pred cCccc-------cccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 99974 678999999999984 566666 55667899999999999999999
Q ss_pred HHHHHHHHHhcccccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEEEe---cCeEEE
Q 010494 285 QQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---KDSTLI 361 (509)
Q Consensus 285 ~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v~---~~~~~~ 361 (509)
++++++|..+ +|++|+ ++++.+|+|||++|||++++ +++++++++||+|+.|++. +++|+|
T Consensus 292 ~~al~~L~~~------gI~~v~-----~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~ 355 (543)
T 3ruv_A 292 DLAQHYLAKE------GIVAAR-----RVKKSDMEKLAKATGANVIA-----AIAALSAQDLGDAGLVEERKISGDSMIF 355 (543)
T ss_dssp HHHHHHHHHT------TCEEEC-----SCCHHHHHHHHHHHCCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHc------CcEEEe-----eCCHHHHHHHHHHhCCceec-----ccccCCHHHCCcccEEEEEEeCCceEEE
Confidence 9999999765 467776 67899999999999999999 6899999999999999975 889999
Q ss_pred EecCCChhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhhC-c
Q 010494 362 VTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-I 440 (509)
Q Consensus 362 ~~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~~g-v 440 (509)
|+||+++ ..+||+|||+|+.+++|++|+++||||++|+++++| +
T Consensus 356 i~g~~~~-----------------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~i 400 (543)
T 3ruv_A 356 VEECKHP-----------------------------------KAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRI 400 (543)
T ss_dssp EECCSSC-----------------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred EECCCCC-----------------------------------ceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 9999876 367999999999999999999999999999999999 9
Q ss_pred cccCchhHHHHHHHHHhHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccc
Q 010494 441 VVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAHK 504 (509)
Q Consensus 441 vpGGGa~e~~ls~~L~~~~~~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~~ 504 (509)
|||||++|++++.+|++++.+.++.+|+ ++++|++||+.||++||+|||+|+.+++.+|++.+
T Consensus 401 VpGGGa~e~~~s~~L~~~~~~~~g~eq~-~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h 463 (543)
T 3ruv_A 401 VSGGGSTEVELSMKLREYAEGISGREQL-AVRAFADALEVIPRTLAENAGLDAIEILVKVRAAH 463 (543)
T ss_dssp EETTTHHHHHHHHHHHHHHHTCCTTHHH-HHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred ecCCcHHHHHHHHHHHHHhhcCChHHHH-HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 9999999999999999998888888874 89999999999999999999999999999998753
No 9
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.8e-88 Score=734.53 Aligned_cols=416 Identities=23% Similarity=0.372 Sum_probs=374.5
Q ss_pred CcceEEecCCCCCCCCCCCCCcccccchhhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchh
Q 010494 5 STPIFAISFKNPTLPKRAPNSVPRAMVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGE 84 (509)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~ 84 (509)
.+|+++++++.++. || ++||..|+.|+..|+++|+|||||+||||||+++.|+++|||||+
T Consensus 4 ~~~~~~l~~~~~~~-----------------~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~ 64 (543)
T 1a6d_B 4 GQPIFILKEGTKRE-----------------SG--KDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGV 64 (543)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHH
T ss_pred CcchhhcCCcchhh-----------------hh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHH
Confidence 46777777775443 47 789999999999999999999999999999999999999999999
Q ss_pred hhhccccccCcccchHhHHHHHHHHhhhhhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhc
Q 010494 85 TVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLT 164 (509)
Q Consensus 85 tIlk~i~~~~p~~~~ga~ll~~~a~~~d~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~ 164 (509)
||+|+|+++||+ |+|++++|++||+++||||||+|+||++||+++.+++++|+||+.|++||++|++.++++|+++
T Consensus 65 tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~ 140 (543)
T 1a6d_B 65 TILKEMDVEHPA----AKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEI 140 (543)
T ss_dssp HHHHHSCCCSHH----HHHHHHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccchH----HHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCc--H-HHHHHhhhhcCC------chhhhhHHHHHHHhhccC--Cc-------EEEe--cCCCcccceEEeeceEE
Q 010494 165 SREVED--H-ELADVAAVSAGN------DYTVGKMISDALQQVGRN--GV-------VTIE--KGKCTENSLEIVEGMRF 224 (509)
Q Consensus 165 s~~v~~--~-~l~~va~ts~~~------~~~l~~li~~Ai~~v~~~--g~-------I~v~--~g~~~~ds~~li~Gi~~ 224 (509)
+++++. . .|.++|+|++++ ++.|+++++||+.+++++ |. |+++ +|++++|+ ++++|++|
T Consensus 141 a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~ 219 (543)
T 1a6d_B 141 STKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGIIV 219 (543)
T ss_dssp CEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEEE
T ss_pred cCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEEE
Confidence 999874 3 899999988653 689999999999999876 53 6665 99999999 99999999
Q ss_pred eccCCCCccccCcCCceeEeeceeeEeeccc-------------CCCHHHH-----------HHHHHHHHhcCCCeEEEe
Q 010494 225 DRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK-------------IKNPKDM-----------FKILDSAVKEKYPIVIVA 280 (509)
Q Consensus 225 ~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~-------------i~~~~~l-----------~~~le~i~~~~~~lvi~~ 280 (509)
+++|.|||| +++++||||+++|++ |++++++ .++++++.+.|+||||++
T Consensus 220 dk~~~~~~m-------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~ 292 (543)
T 1a6d_B 220 DKEKVHPGM-------PDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQ 292 (543)
T ss_dssp SCCCSSTTS-------CSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEES
T ss_pred ecCCCCCCC-------cceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEC
Confidence 999999985 567999999999998 7777775 678899999999999999
Q ss_pred ccchHHHHHHHHHhcccccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEEEe---cC
Q 010494 281 EDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---KD 357 (509)
Q Consensus 281 ~~i~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v~---~~ 357 (509)
++|+++++++|+.|+ |+||+ ++++.+|+|||++|||++++ +++++++++||+|+.|++. ++
T Consensus 293 ~~I~~~al~~L~~~~------I~av~-----~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~ 356 (543)
T 1a6d_B 293 KGIDDMAQHYLSRAG------IYAVR-----RVKKSDMDKLAKATGASIVS-----TIDEISSSDLGTAERVEQVKVGED 356 (543)
T ss_dssp SCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHTCCEES-----CGGGCCGGGCEEEEEEEEEEETTE
T ss_pred CCcCHHHHHHHHHCC------eeEec-----cCCHHHHHHHHHHhCCceec-----ccccCCHHHCCCceEEEEEEecCc
Confidence 999999999999884 68875 78899999999999999999 6899999999999999974 88
Q ss_pred eEEEEecCCChhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHh
Q 010494 358 STLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIE 437 (509)
Q Consensus 358 ~~~~~~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~ 437 (509)
+|++|+||+++ ++|||+|||+|+.+++|++|+++|||+++|++++
T Consensus 357 ~~~~~~g~~~~-----------------------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~ 401 (543)
T 1a6d_B 357 YMTFVTGCKNP-----------------------------------KAVSILVRGETEHVVDEMERSITDSLHVVASALE 401 (543)
T ss_dssp EEEEEEEESSS-----------------------------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCCC-----------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998754 5899999999999999999999999999999999
Q ss_pred hC-ccccCchhHHHHHHHHHhHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 438 EG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 438 ~g-vvpGGGa~e~~ls~~L~~~~~~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
+| +|||||++|++++.+|++++...++.+| +++++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 402 ~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~ 467 (543)
T 1a6d_B 402 DGAYAAGGGATAAEIAFRLRSYAQKIGGRQQ-LAIEKFADAIEEIPRALAENAGLDPIDILLKLRAE 467 (543)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHTCSSHH-HHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred CCCccCCccHHHHHHHHHHHHHhhhcCChHH-HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 99 9999999999999999999887778777 48999999999999999999999999999999865
No 10
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.6e-88 Score=734.78 Aligned_cols=413 Identities=21% Similarity=0.358 Sum_probs=375.9
Q ss_pred ceEEecCCCCCCCCCCCCCcccccchhhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhh
Q 010494 7 PIFAISFKNPTLPKRAPNSVPRAMVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETV 86 (509)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tI 86 (509)
|+++++++.++ .|| ++||..|+.|+..|+++|+|||||+||||||+++.|+++|||||+||
T Consensus 7 ~~~~l~~~~~~-----------------~~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tI 67 (545)
T 1a6d_A 7 PILVLKEGTQR-----------------EQG--KNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATI 67 (545)
T ss_dssp ----------C-----------------EEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHH
T ss_pred cccccCCcchh-----------------hch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHH
Confidence 77777776443 457 89999999999999999999999999999999999999999999999
Q ss_pred hccccccCcccchHhHHHHHHHHhhhhhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCc
Q 010494 87 LKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSR 166 (509)
Q Consensus 87 lk~i~~~~p~~~~ga~ll~~~a~~~d~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~ 166 (509)
+|+|+++||+ |+|++++|++||+++||||||+|+||++||+++.+++++|+||+.|++||++|++.++++|+++++
T Consensus 68 lk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~ 143 (545)
T 1a6d_A 68 LKEMDVEHPT----AKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAE 143 (545)
T ss_dssp HHHSCCCSHH----HHHHHGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred HHhhhccchH----HHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999998 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC-cH-HHHHHhhhhcC------CchhhhhHHHHHHHhhccC---------CcEEEe--cCCCcccceEEeeceEEecc
Q 010494 167 EVE-DH-ELADVAAVSAG------NDYTVGKMISDALQQVGRN---------GVVTIE--KGKCTENSLEIVEGMRFDRG 227 (509)
Q Consensus 167 ~v~-~~-~l~~va~ts~~------~~~~l~~li~~Ai~~v~~~---------g~I~v~--~g~~~~ds~~li~Gi~~~~~ 227 (509)
+ + +. .|.++|+||++ +++.|+++++||+.+++++ +.|+++ +|++++|| ++++|++|+++
T Consensus 144 ~-~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~ 221 (545)
T 1a6d_A 144 K-STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVIDKE 221 (545)
T ss_dssp E-CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEESCC
T ss_pred C-CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEecc
Confidence 9 7 55 89999998865 4689999999999999875 367765 99999999 99999999999
Q ss_pred CCCCccccCcCCceeEeeceeeEeeccc-------------CCCHHHH-----------HHHHHHHHhcCCCeEEEeccc
Q 010494 228 FLSPYFVTDRQKRTVEFHDGKLLLVDKK-------------IKNPKDM-----------FKILDSAVKEKYPIVIVAEDI 283 (509)
Q Consensus 228 ~~~p~~~~~~~~~~~~~~~~kIll~d~~-------------i~~~~~l-----------~~~le~i~~~~~~lvi~~~~i 283 (509)
|.|||| +++++||||+++|++ |++++++ .++++++.+.|+||||++++|
T Consensus 222 ~~~~~m-------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I 294 (545)
T 1a6d_A 222 KVHSKM-------PDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGI 294 (545)
T ss_dssp CSCTTS-------CSEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCB
T ss_pred CCCCCC-------cceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCc
Confidence 999985 567999999999998 7777775 678899999999999999999
Q ss_pred hHHHHHHHHHhcccccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEEEe---cCeEE
Q 010494 284 EQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---KDSTL 360 (509)
Q Consensus 284 ~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v~---~~~~~ 360 (509)
+++++++|+.|+ |+||+ ++++.+|+|||++|||++++ +++++++++||+|+.|++. +++|+
T Consensus 295 ~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~~~ 358 (545)
T 1a6d_A 295 DDVAQHYLAKEG------IYAVR-----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEERKIGDDRMT 358 (545)
T ss_dssp CHHHHHHHHHHT------CEEEC-----SCCHHHHHHHHHHHCCCEES-----SGGGCCGGGCEEEEEEEEEEETTEEEE
T ss_pred cHHHHHHHHHCC------eeEec-----cCCHHHHHHHHHHhCCeeec-----ccccCCHHHCCCceEEEEEEecCceEE
Confidence 999999999884 68875 78899999999999999999 6899999999999999975 78999
Q ss_pred EEecCCChhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhhC-
Q 010494 361 IVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG- 439 (509)
Q Consensus 361 ~~~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~~g- 439 (509)
+|+||+++ ++|||+|||+|+.+++|++|+++|||+++|+++++|
T Consensus 359 ~~~g~~~~-----------------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~ 403 (545)
T 1a6d_A 359 FVMGCKNP-----------------------------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGK 403 (545)
T ss_dssp EEEEESCS-----------------------------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred EEecCCCC-----------------------------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99998754 589999999999999999999999999999999999
Q ss_pred ccccCchhHHHHHHHHHhHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 440 IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 440 vvpGGGa~e~~ls~~L~~~~~~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
+|||||++|++++.+|++++...++.+| +++++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 404 iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~ 466 (545)
T 1a6d_A 404 FLWGGGAVEAELAMRLAKYANSVGGREQ-LAIEAFAKALEIIPRTLAENAGIDPINTLIKLKAD 466 (545)
T ss_dssp EEETTTHHHHHHHHHHHHHHHTSCHHHH-HHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred EEeCcCHHHHHHHHHHHHHhhccCccHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 9999999999999999999877777777 58999999999999999999999999999999865
No 11
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.7e-87 Score=722.17 Aligned_cols=403 Identities=20% Similarity=0.316 Sum_probs=369.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhhhccccccCcccchHhHHHHHHHHhhhhhcCCCc
Q 010494 40 GSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGC 119 (509)
Q Consensus 40 ~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~~~d~~~GDGT 119 (509)
.+++..|+.||..|+++|+|||||+||||||+++.|+|+|||||+||+|+|+++||+ |+|++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (515)
T 3iyg_H 10 IPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPA----AKTLVDIAKSQDAEVGDGT 85 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhhceeCcch
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccC--c----H-HHHHHhhhhcC------Cchh
Q 010494 120 TTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE--D----H-ELADVAAVSAG------NDYT 186 (509)
Q Consensus 120 Tt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~----~-~l~~va~ts~~------~~~~ 186 (509)
||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ + . .|.++|+||++ +++.
T Consensus 86 TtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~ 165 (515)
T 3iyg_H 86 TSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAF 165 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHH
Confidence 99999999999999999999999999999999999999999999999984 4 3 67999999875 4689
Q ss_pred hhhHHHHHHHhhccC---CcEEEe--cCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEeeccc------
Q 010494 187 VGKMISDALQQVGRN---GVVTIE--KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK------ 255 (509)
Q Consensus 187 l~~li~~Ai~~v~~~---g~I~v~--~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~------ 255 (509)
|+++++||+.+++.+ +.|+++ +|+++.|+ ++++|++|+++|.||||.++ |.+++||||+++|++
T Consensus 166 i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~~----p~~~en~kIll~~~~Le~~k~ 240 (515)
T 3iyg_H 166 FAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEMQ----PKKYHNPMIALLNVELELKAE 240 (515)
T ss_pred HHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCcccccC----CccccccEEEEEccccccccc
Confidence 999999999999876 666654 68899998 99999999999999998654 458999999999994
Q ss_pred -------CCCHHHH-----------HHHHHHHHhcCCCeEEEeccchHHHHHHHHHhcccccceeeeecCcccccCccch
Q 010494 256 -------IKNPKDM-----------FKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHY 317 (509)
Q Consensus 256 -------i~~~~~l-----------~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~ 317 (509)
|++++++ .++++++.+.|+||||++++|++.++++|..+ +|+++ +++++.+
T Consensus 241 e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~------gI~~v-----~~~~k~~ 309 (515)
T 3iyg_H 241 KDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR------DMFCA-----GRVPEED 309 (515)
T ss_pred ccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHc------CCccc-----ccccHHH
Confidence 6777776 45688999999999999999999887777433 35555 4788999
Q ss_pred HHHHHHHhCCeeeecccCccccCCCccccCcceEEEEe---cCeEEEEecCCChhHHHHHHHHHHHHHhhhhHHHHHHHH
Q 010494 318 LDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---KDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNIL 394 (509)
Q Consensus 318 L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v~---~~~~~~~~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l 394 (509)
|+|||++|||++++ +++++++++||+|+.|++. +++|++|+||+++
T Consensus 310 leria~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~-------------------------- 358 (515)
T 3iyg_H 310 LKRTMMACGGSIQT-----SVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKA-------------------------- 358 (515)
T ss_pred HHHHHHHhCCEEee-----ccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC--------------------------
Confidence 99999999999999 6899999999999999865 7899999999765
Q ss_pred HHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhhC-ccccCchhHHHHHHHHHhHhccCCcHHHHHHHHH
Q 010494 395 NERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEI 473 (509)
Q Consensus 395 ~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~~q~~~~~~ 473 (509)
..|||+|||+|+.+++|++|+++||||++|++++++ +|||||++|++++.+|++++...++.+|+ ++++
T Consensus 359 ---------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~-~i~~ 428 (515)
T 3iyg_H 359 ---------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQL-LIGA 428 (515)
T ss_pred ---------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHHH-HHHH
Confidence 478999999999999999999999999999999985 99999999999999999998888888875 8999
Q ss_pred HHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 474 FKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 474 ~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
|++||+.||++||+|||+|+.+++.+|++.
T Consensus 429 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~ 458 (515)
T 3iyg_H 429 YAKALEIIPRQLCDNAGFDATNILNKLRAR 458 (515)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 999999999999999999999999999875
No 12
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=5.6e-89 Score=738.37 Aligned_cols=422 Identities=20% Similarity=0.277 Sum_probs=373.0
Q ss_pred CCC--CCcceEEecCCCCCCCCCCCCCcccccchhhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcE
Q 010494 1 MAA--LSTPIFAISFKNPTLPKRAPNSVPRAMVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPK 78 (509)
Q Consensus 1 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~ 78 (509)
|++ |..|++++++++++.+ | .++|..|+.||..|+++|++||||+||||||+++.|+|+
T Consensus 1 ~~~~~~~~~~~~l~~~~~~~~-----------------g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ 61 (550)
T 3p9d_G 1 MNFGSQTPTIVVLKEGTDASQ-----------------G--KGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTT 61 (550)
T ss_dssp ---------------CCCEEE-----------------S--HHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEE
T ss_pred CCcccCCcchhhhcCCcchhh-----------------h--HHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeE
Confidence 667 8999999999987766 6 789999999999999999999999999999999999999
Q ss_pred eccchhhhhccccccCcccchHhHHHHHHHHhhhhhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 010494 79 IVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALL 158 (509)
Q Consensus 79 iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~~~d~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l 158 (509)
|||||+||+|+|+++||+ |+|++++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++
T Consensus 62 ITnDG~TIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~ 137 (550)
T 3p9d_G 62 ISNDGATILKLLDVVHPA----AKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAV 137 (550)
T ss_dssp EECCHHHHTTTSCCCSHH----HHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHccCCCHH----HHHHHHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcccC--c---H-HHHHHhhhhcC------CchhhhhHHHHHHHhhccC-------CcEEEecCCCcccceEEe
Q 010494 159 SELKLTSREVE--D---H-ELADVAAVSAG------NDYTVGKMISDALQQVGRN-------GVVTIEKGKCTENSLEIV 219 (509)
Q Consensus 159 ~~L~~~s~~v~--~---~-~l~~va~ts~~------~~~~l~~li~~Ai~~v~~~-------g~I~v~~g~~~~ds~~li 219 (509)
++|++++++++ + . .|.++|+||++ +++.|+++++||+.+++++ +++++ +|++++|| +++
T Consensus 138 ~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~ds-~lv 215 (550)
T 3p9d_G 138 EKINELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEES-LFI 215 (550)
T ss_dssp HHHHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGGC-CCC
T ss_pred HHHHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccce-eEE
Confidence 99999999875 2 4 79999999875 3689999999999999843 44554 69999999 999
Q ss_pred eceEEeccCCCCccccCcCCceeEeeceeeEeeccc-------------CCCHHHHHH-----------HHHHHHhcCCC
Q 010494 220 EGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK-------------IKNPKDMFK-----------ILDSAVKEKYP 275 (509)
Q Consensus 220 ~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~-------------i~~~~~l~~-----------~le~i~~~~~~ 275 (509)
+|++|+++|.||||.+ |+..++||+|+++|++ |++++++.+ +++++.+.|++
T Consensus 216 ~G~~~dk~~~s~yf~~----~~~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~ 291 (550)
T 3p9d_G 216 NGVAFKKTFSYAGFEQ----QPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGAN 291 (550)
T ss_dssp SSEEECCCSSCTTCSC----SCSCCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCS
T ss_pred eeEEEecccccccccc----CcccccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999865 4556999999999997 566666655 57788999999
Q ss_pred eEEEeccchHHHHHHHHHhcccccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEEE-
Q 010494 276 IVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVI- 354 (509)
Q Consensus 276 lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v- 354 (509)
|||++++|++.++++|..+ +|+++ +++++.+|+|||++|||++++ +++++++++||+|+.+++
T Consensus 292 vVi~~~~I~dla~~~L~~~------gI~~v-----~~v~k~~lerIa~~tGa~iis-----~l~~l~~~~LG~a~~v~~~ 355 (550)
T 3p9d_G 292 IVLSKLPIGDLATQFFADR------NIFCA-----GRVSADDMNRVIQAVGGSIQS-----TTSDIKPEHLGTCALFEEM 355 (550)
T ss_dssp EEEESSCCCHHHHHTTGGG------TCEEE-----ECCCTTHHHHHHHHTCCCCBS-----SGGGCCGGGCCCCSBCCCC
T ss_pred EEEECCCccHHHHHHHHHc------CCccc-----cCcCHHHHHHHHHHhCCceec-----chhhCCHHHcCCceEEEEE
Confidence 9999999999888776433 45655 478899999999999999999 689999999999999986
Q ss_pred --ecCeEEEEecCCChhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHH
Q 010494 355 --TKDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNAT 432 (509)
Q Consensus 355 --~~~~~~~~~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~ 432 (509)
+++++++|+||+++ ++|||+|||+|+.+++|++|+++||||++
T Consensus 356 ~ig~e~~~~~~g~~~~-----------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~ 400 (550)
T 3p9d_G 356 QIGSERYNLFQGCPQA-----------------------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIV 400 (550)
T ss_dssp CCSSSCCEEEBCCTTC-----------------------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHH
T ss_pred EeCCeEEEEEecCCCC-----------------------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHH
Confidence 58899999999754 57899999999999999999999999999
Q ss_pred HHHHhhC-ccccCchhHHHHHHHHHhHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 433 KAAIEEG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 433 ~~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
|+++++| +|||||++|++++.+|++++...++.+|+ ++++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 401 r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~-~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~ 471 (550)
T 3p9d_G 401 KRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQM-IINAFAKALEVIPRQLCENAGFDAIEILNKLRLA 471 (550)
T ss_dssp HHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHH-HHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHH
T ss_pred HHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHH-HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 9999999 99999999999999999998888888885 8999999999999999999999999999999875
No 13
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.6e-88 Score=736.14 Aligned_cols=412 Identities=21% Similarity=0.314 Sum_probs=380.3
Q ss_pred chhhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhhhccccccCcccchHhHHHHHHHHh
Q 010494 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGAR 110 (509)
Q Consensus 31 ~k~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~~ 110 (509)
+|...|| ++||..|+.||..|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 16 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 89 (559)
T 3p9d_A 16 GGEKISG--DDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPA----GKILVELAQQ 89 (559)
T ss_dssp SCEEEET--HHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHH----HHHHHHHHHH
T ss_pred cccccch--HHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHH----HHHHHHHHHH
Confidence 6889999 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred hhhhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHh-cCcccCc--H-HHHHHhhhhcCC---
Q 010494 111 TNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKL-TSREVED--H-ELADVAAVSAGN--- 183 (509)
Q Consensus 111 ~d~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~-~s~~v~~--~-~l~~va~ts~~~--- 183 (509)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++ ++++++. . .|.++|+||+++
T Consensus 90 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~ 169 (559)
T 3p9d_A 90 QDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKII 169 (559)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGG
T ss_pred HHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999 9999875 3 899999999986
Q ss_pred ---chhhhhHHHHHHHhhcc-----CCc-----EE--EecCCCcccceEEeeceEEeccCCCCccccCcCCceeEee--c
Q 010494 184 ---DYTVGKMISDALQQVGR-----NGV-----VT--IEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFH--D 246 (509)
Q Consensus 184 ---~~~l~~li~~Ai~~v~~-----~g~-----I~--v~~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~--~ 246 (509)
++.|+++++||+.++++ ++. |+ ..+|++++|+ ++++|++|+++|.||| |+++++ |
T Consensus 170 ~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ie~~n 241 (559)
T 3p9d_A 170 GADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGYALNCTVASQA-------MPKRIAGGN 241 (559)
T ss_dssp GTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTT-------SCSEECSSS
T ss_pred cchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccEEEeecccCCC-------cceeeccCC
Confidence 78999999999999984 243 33 3469999998 9999999999999997 466888 9
Q ss_pred eeeEeecccC-------------CCHHH-----------HHHHHHHHHhcCCCeEEEeccchHHHHHHHHHhccccccee
Q 010494 247 GKLLLVDKKI-------------KNPKD-----------MFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKA 302 (509)
Q Consensus 247 ~kIll~d~~i-------------~~~~~-----------l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~i 302 (509)
|||+++|+++ +++++ +.++++++.+.|+||||++++|+++++++|+.|+ |
T Consensus 242 ~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~------I 315 (559)
T 3p9d_A 242 VKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAK------I 315 (559)
T ss_dssp BCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTT------C
T ss_pred ceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcC------C
Confidence 9999999986 45544 5778999999999999999999999999999985 5
Q ss_pred eeecCcccccCccchHHHHHHHhCCeeeecccCccc-cCCCccccCcceEEE---EecCeEEEEecCCChhHHHHHHHHH
Q 010494 303 AAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTL-DKAGKEVLGTAIKVV---ITKDSTLIVTDGSTRAAVEKRISEI 378 (509)
Q Consensus 303 ~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~-~~~~~~~lG~~~~i~---v~~~~~~~~~g~~~~~~i~~ri~~l 378 (509)
+||+ ++++.+|+|||++|||+++++..++.+ +++++++||+|+.|+ +++++|++|+||+++
T Consensus 316 ~av~-----~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~---------- 380 (559)
T 3p9d_A 316 MGVR-----RCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKH---------- 380 (559)
T ss_dssp EEES-----SCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSS----------
T ss_pred ceEc-----cCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCC----------
Confidence 7765 788999999999999999997655554 889999999999998 578999999998754
Q ss_pred HHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhhC-ccccCchhHHHHHHHHHh
Q 010494 379 RSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEG 457 (509)
Q Consensus 379 ~~~~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGGa~e~~ls~~L~~ 457 (509)
++|||+|||+|+.+++|++|+++|||+++|+++++| +|||||++|++++.+|++
T Consensus 381 -------------------------~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~ 435 (559)
T 3p9d_A 381 -------------------------SSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDN 435 (559)
T ss_dssp -------------------------CCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHH
T ss_pred -------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999 999999999999999999
Q ss_pred HhccCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 458 IKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 458 ~~~~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
++.+.++.+|+ ++++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 436 ~~~~~~g~eq~-~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~ 480 (559)
T 3p9d_A 436 FATTVGSREQL-AIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSY 480 (559)
T ss_dssp HHTTSCTTHHH-HHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHH
T ss_pred HhcccChHHHH-HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 98888787774 8999999999999999999999999999999875
No 14
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=8.9e-87 Score=716.77 Aligned_cols=403 Identities=22% Similarity=0.312 Sum_probs=373.0
Q ss_pred hccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCC--CCcEeccchhhhhccccccCcccchHhHHHHHHHHhh
Q 010494 34 VYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKY--GPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGART 111 (509)
Q Consensus 34 i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~--g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~~~ 111 (509)
-.|| .++|..|+.||+.|+++|+|||||+||||||+++. |+|+|||||+||+|+|+++||. |+|++++|++|
T Consensus 5 ~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~----Akll~e~a~~q 78 (513)
T 3iyg_B 5 EERA--ETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPA----AKVLVDMSRVQ 78 (513)
T ss_pred hhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHH----HHHHHHHHHHh
Confidence 4578 89999999999999999999999999999999999 9999999999999999999998 99999999999
Q ss_pred hhhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccC-----cH-HHHHHhhhhcC---
Q 010494 112 NDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE-----DH-ELADVAAVSAG--- 182 (509)
Q Consensus 112 d~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~-----~~-~l~~va~ts~~--- 182 (509)
|+++||||||+|+||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. .|.++|+||++
T Consensus 79 d~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~ 158 (513)
T 3iyg_B 79 DDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKL 158 (513)
T ss_pred hhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccc
Confidence 9999999999999999999999999999999999999999999999999999999986 34 89999998875
Q ss_pred ---CchhhhhHHHHHHHhhccC---CcEEEe--cCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEeecc
Q 010494 183 ---NDYTVGKMISDALQQVGRN---GVVTIE--KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDK 254 (509)
Q Consensus 183 ---~~~~l~~li~~Ai~~v~~~---g~I~v~--~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~ 254 (509)
+++.|+++++||+.+++++ +.|+++ +|+++.|+ ++++|++|+++|.+| |+++++||||+++|+
T Consensus 159 ~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~~en~kIll~~~ 229 (513)
T 3iyg_B 159 LTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKRIENAKILIANT 229 (513)
T ss_pred cccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC--------CceeecCceEEEEcC
Confidence 4589999999999999987 777654 69999999 999999999999876 678899999999998
Q ss_pred --------------cCCCHHHHHH-----------HHHHHHhcCCCeEEEeccchHHHHHHHHHhcccccceeeeecCcc
Q 010494 255 --------------KIKNPKDMFK-----------ILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPA 309 (509)
Q Consensus 255 --------------~i~~~~~l~~-----------~le~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~~ 309 (509)
.|++++++.+ +++++.+.|+||||++++|+++++++|..+ +|+||++|+
T Consensus 230 ~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~------~I~av~~~~ 303 (513)
T 3iyg_B 230 GMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAA------GVMAIEHAD 303 (513)
T ss_pred CcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHc------CceEEecCC
Confidence 3667777755 688899999999999999999999999765 589999886
Q ss_pred cccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEE---EecCeEEEEecCCChhHHHHHHHHHHHHHhhhh
Q 010494 310 FGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVV---ITKDSTLIVTDGSTRAAVEKRISEIRSLAEITE 386 (509)
Q Consensus 310 ~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~---v~~~~~~~~~g~~~~~~i~~ri~~l~~~~~~~~ 386 (509)
+ .+|+|||++|||++++ +++++++++||+|+.|+ ++++++++|.||+++
T Consensus 304 ~-----~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~------------------ 355 (513)
T 3iyg_B 304 F-----VGVERLALVTGGEIAS-----TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALG------------------ 355 (513)
T ss_pred H-----HHHHHHHHHhCCEEec-----ccccCCHhHCCcccEEEEEEECCeEEEEEecCCCC------------------
Confidence 4 5799999999999999 68999999999999998 578999999998643
Q ss_pred HHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhh-CccccCchhHHHHHHHHHhHhccCCcH
Q 010494 387 ERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEE-GIVVGGGCSLLRLSAKVEGIKELLDNE 465 (509)
Q Consensus 387 ~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~~-gvvpGGGa~e~~ls~~L~~~~~~~~~~ 465 (509)
++|||+|||+|+.+++|++|+++|||+++|+++++ ++|||||++|++++.+|++++.+.++.
T Consensus 356 -----------------~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~ 418 (513)
T 3iyg_B 356 -----------------EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGK 418 (513)
T ss_pred -----------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcH
Confidence 58999999999999999999999999999999999 599999999999999999998878787
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 466 EQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 466 ~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
+|+ ++++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 419 ~q~-~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~ 455 (513)
T 3iyg_B 419 EAV-AMESYAKALRMLPTIIADNAGYDSADLVAQLRAA 455 (513)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 775 8999999999999999999999999999999875
No 15
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=6.8e-88 Score=727.21 Aligned_cols=412 Identities=19% Similarity=0.296 Sum_probs=377.2
Q ss_pred chhhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhhhccccccCcccchHhHHHHHHHHh
Q 010494 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGAR 110 (509)
Q Consensus 31 ~k~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~~ 110 (509)
.|+..|| ++||..|+.|+..|+++|++||||+||||||+++.|+|+|||||+||+|+|+++||+ |+|++++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~ 84 (528)
T 3p9d_D 11 FKNKEKP--QEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPV----ARMLVEVSAA 84 (528)
T ss_dssp SCBCCCH--HHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTT----HHHHHHHHHH
T ss_pred cchhcch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHH----HHHHHHHHHH
Confidence 4677889 899999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred hhhhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccC--cH-HHHHHhhhhcCC----
Q 010494 111 TNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE--DH-ELADVAAVSAGN---- 183 (509)
Q Consensus 111 ~d~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~-~l~~va~ts~~~---- 183 (509)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. .|.++|+||+++
T Consensus 85 qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~ 164 (528)
T 3p9d_D 85 QDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVS 164 (528)
T ss_dssp HHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCS
T ss_pred hhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999987 55 899999999986
Q ss_pred --chhhhhHHHHHHHhhcc--CCcEE-------EecCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEee
Q 010494 184 --DYTVGKMISDALQQVGR--NGVVT-------IEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLV 252 (509)
Q Consensus 184 --~~~l~~li~~Ai~~v~~--~g~I~-------v~~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~ 252 (509)
++.|+++++||+.++++ +|.|. ..+|++++|+ ++++|++|+++|.||+| |++.++||||+++
T Consensus 165 ~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~~ien~kIll~ 237 (528)
T 3p9d_D 165 QYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPTRKEKAKIGLI 237 (528)
T ss_dssp TTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCSEESSEEEEEE
T ss_pred hhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc------CcccccCceEEEE
Confidence 68999999999999987 34432 2359999998 99999999999999985 7789999999999
Q ss_pred cccCC-------------CHHH-----------HHHHHHHHHhcCCCeEEEeccc-----hHHHHHHHHHhcccccceee
Q 010494 253 DKKIK-------------NPKD-----------MFKILDSAVKEKYPIVIVAEDI-----EQQALALLIRNKLRGVLKAA 303 (509)
Q Consensus 253 d~~i~-------------~~~~-----------l~~~le~i~~~~~~lvi~~~~i-----~~~al~~l~~n~~~~~~~i~ 303 (509)
|++++ ++++ +.++++++.+.|+||||++++| +++++++|..| +|+
T Consensus 238 ~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~------~I~ 311 (528)
T 3p9d_D 238 QFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKL------NIM 311 (528)
T ss_dssp CCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTT------SCC
T ss_pred eccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHc------CcE
Confidence 99765 4443 6778999999999999999999 99999999876 478
Q ss_pred eecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEEE---ecCeEEEEecCCChhHHHHHHHHHHH
Q 010494 304 AIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVI---TKDSTLIVTDGSTRAAVEKRISEIRS 380 (509)
Q Consensus 304 aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v---~~~~~~~~~g~~~~~~i~~ri~~l~~ 380 (509)
||+ ++++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|.+..
T Consensus 312 av~-----~~~k~~le~ia~~tGa~ii~-----~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~----------- 370 (528)
T 3p9d_D 312 VVK-----DIEREEIEFLSKGLGCKPIA-----DIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN----------- 370 (528)
T ss_dssp EEE-----CCCTHHHHHHHHHHTCCCCS-----CSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGG-----------
T ss_pred EEE-----eCCHHHHHHHHHHHCCEEec-----ccccCCHHHCCcccEEEEEEECCEEEEEEEcccccC-----------
Confidence 887 66789999999999999999 588999999999999985 467889999876210
Q ss_pred HHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhhC-ccccCchhHHHHHHHHHhHh
Q 010494 381 LAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIK 459 (509)
Q Consensus 381 ~~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGGa~e~~ls~~L~~~~ 459 (509)
.+++|||+|||+|+.+++|++|+++|||+++|+++++| +|||||++|++++.+|++++
T Consensus 371 ---------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~ 429 (528)
T 3p9d_D 371 ---------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEA 429 (528)
T ss_dssp ---------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCC
T ss_pred ---------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHh
Confidence 14689999999999999999999999999999999999 99999999999999999998
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccc
Q 010494 460 ELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAHK 504 (509)
Q Consensus 460 ~~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~~ 504 (509)
.+.++.+| +++++|++||+.||++||+|||+|+.+++.+|++.+
T Consensus 430 ~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h 473 (528)
T 3p9d_D 430 RSMEGVQA-FIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKH 473 (528)
T ss_dssp TTSCHHHH-TTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCC
T ss_pred hccChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 77777777 589999999999999999999999999999998853
No 16
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-86 Score=717.29 Aligned_cols=408 Identities=21% Similarity=0.300 Sum_probs=372.3
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhhhccccccCcccchHhHHHHHHHHhhhhh
Q 010494 35 YFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDL 114 (509)
Q Consensus 35 ~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~~~d~~ 114 (509)
.|| .++|..|+.|+..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+ |+|++++|++||++
T Consensus 6 ~~g--~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~e 79 (529)
T 3iyg_A 6 STG--EAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKVLCELADLQDKE 79 (529)
T ss_pred hch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChH----HHHHHHHHHHhhhh
Confidence 468 899999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHh-cCcccC--cH-HHHHHhhhhcC------Cc
Q 010494 115 AGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKL-TSREVE--DH-ELADVAAVSAG------ND 184 (509)
Q Consensus 115 ~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~-~s~~v~--~~-~l~~va~ts~~------~~ 184 (509)
+||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++ ++++++ +. .|.++|+||++ ++
T Consensus 80 ~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~ 159 (529)
T 3iyg_A 80 VGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGING 159 (529)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccccH
Confidence 9999999999999999999999999999999999999999999999999 999987 44 89999999986 36
Q ss_pred hhhhhHHHHHHHhhc---cCC-----c--EE--EecCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEee
Q 010494 185 YTVGKMISDALQQVG---RNG-----V--VT--IEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLV 252 (509)
Q Consensus 185 ~~l~~li~~Ai~~v~---~~g-----~--I~--v~~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~ 252 (509)
+.|+++++||+.+++ ++| . |+ ..+|+++.|| ++++|++|+++|.||+ |++.++||||+++
T Consensus 160 ~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIlll 231 (529)
T 3iyg_A 160 DFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGYALNCVVGSQG-------MPKRIVNAKIACL 231 (529)
T ss_pred HHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeeeEEecCccccc-------CCcccCCceEEEe
Confidence 899999999999997 333 2 44 3589999998 9999999999999997 4567999999999
Q ss_pred cccC-------------CCHHH-----------HHHHHHHHHhcCCCeEEEeccchHHHHHHHHHhcccccceeeeecCc
Q 010494 253 DKKI-------------KNPKD-----------MFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAP 308 (509)
Q Consensus 253 d~~i-------------~~~~~-----------l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~ 308 (509)
|+++ +++++ +.++++++.+.|+||||++++|+++++++|..|+ |+||+
T Consensus 232 ~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~g------I~av~-- 303 (529)
T 3iyg_A 232 DFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG------AMAVR-- 303 (529)
T ss_pred cCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC------Cceec--
Confidence 9964 44444 4567889999999999999999999999999884 78886
Q ss_pred ccccCccchHHHHHHHhCCeeeecccCcc-ccCCCccccCcceEEE---EecCeEEEEecCCChhHHHHHHHHHHHHHhh
Q 010494 309 AFGERKSHYLDDIAILTGGLVIRDEMGLT-LDKAGKEVLGTAIKVV---ITKDSTLIVTDGSTRAAVEKRISEIRSLAEI 384 (509)
Q Consensus 309 ~~~~~~~~~L~~ia~~tG~~ii~~~~~~~-~~~~~~~~lG~~~~i~---v~~~~~~~~~g~~~~~~i~~ri~~l~~~~~~ 384 (509)
++++.+|+|||++|||+++++..+++ .+++++++||+|+.|+ +++++|++|+||+++
T Consensus 304 ---~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~---------------- 364 (529)
T 3iyg_A 304 ---RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKAR---------------- 364 (529)
T ss_pred ---cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCC----------------
Confidence 67899999999999999999654443 2456678999999998 678999999999765
Q ss_pred hhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhhC-ccccCchhHHHHHHHHHhHhccCC
Q 010494 385 TEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELLD 463 (509)
Q Consensus 385 ~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~ 463 (509)
++|||+|||+|+.+++|.+|+++|||+++|+++++| +||||||+|+++|.+|++++.+.+
T Consensus 365 -------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~ 425 (529)
T 3iyg_A 365 -------------------TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMG 425 (529)
T ss_pred -------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhcC
Confidence 478999999999999999999999999999999999 999999999999999999998888
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 464 NEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 464 ~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
+.+|+ ++++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 426 g~eq~-~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~ 464 (529)
T 3iyg_A 426 SREQL-AIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAF 464 (529)
T ss_pred ChHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 88885 8999999999999999999999999999999875
No 17
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.7e-86 Score=710.31 Aligned_cols=405 Identities=22% Similarity=0.343 Sum_probs=369.8
Q ss_pred hhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhhhccccccCcccchHhHHHHHHHHhhh
Q 010494 33 EVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTN 112 (509)
Q Consensus 33 ~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~~~d 112 (509)
.-.|| .+||..|+.|++.|+++|++||||+||||||+++.|+|+|||||+||+|+|+++||+ |+|++++|++||
T Consensus 4 ~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~----Akll~~~a~~qd 77 (515)
T 3iyg_E 4 SRLMG--LEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQI----AKLMVELSKSQD 77 (515)
T ss_pred hhhch--HHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHH----HHHHHHHHHHhh
Confidence 34578 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred hhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccCc----H-HHHHHhhhhcCC----
Q 010494 113 DLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVED----H-ELADVAAVSAGN---- 183 (509)
Q Consensus 113 ~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~~----~-~l~~va~ts~~~---- 183 (509)
+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|++++++++. . .|.++|+||+++
T Consensus 78 ~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~ 157 (515)
T 3iyg_E 78 DEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVN 157 (515)
T ss_pred hhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchh
Confidence 9999999999999999999999999999999999999999999999999999998753 3 899999999986
Q ss_pred --chhhhhHHHHHHHhhccC-------CcEE--EecCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEee
Q 010494 184 --DYTVGKMISDALQQVGRN-------GVVT--IEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLV 252 (509)
Q Consensus 184 --~~~l~~li~~Ai~~v~~~-------g~I~--v~~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~ 252 (509)
.+.|+++++||+..+.+. +.|+ ..+|+++.|+ ++++|++|+++|.|||| ++.++||+|+++
T Consensus 158 ~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~m-------~~~~~~~kIall 229 (515)
T 3iyg_E 158 SCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQM-------PKQVEDAKIAIL 229 (515)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEEEecccccccc-------cccCCCceEEEE
Confidence 378999999999998652 2344 3589999998 99999999999999985 456778899888
Q ss_pred ccc-------------CCCHHHH-----------HHHHHHHHhcCCCeEEEeccchHHHHHHHHHhcccccceeeeecCc
Q 010494 253 DKK-------------IKNPKDM-----------FKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAP 308 (509)
Q Consensus 253 d~~-------------i~~~~~l-----------~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~ 308 (509)
+++ |++++++ .++++++.+.|+||||++++|+++++++|+.|+ +.+|+
T Consensus 230 ~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~------I~~v~-- 301 (515)
T 3iyg_E 230 TCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQND------LPAVR-- 301 (515)
T ss_pred cCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCC------CEEEe--
Confidence 764 5667775 567899999999999999999999999999985 46666
Q ss_pred ccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEEE-----ecCeEEEEecCCChhHHHHHHHHHHHHHh
Q 010494 309 AFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVI-----TKDSTLIVTDGSTRAAVEKRISEIRSLAE 383 (509)
Q Consensus 309 ~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v-----~~~~~~~~~g~~~~~~i~~ri~~l~~~~~ 383 (509)
++++.+|+|||++|||++++ +++++++++||+|+.|++ ++++|++|+||+++
T Consensus 302 ---~v~k~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~--------------- 358 (515)
T 3iyg_E 302 ---WVGGPEIELIAIATGGRIVP-----RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNS--------------- 358 (515)
T ss_pred ---ccCHHHHHHHHHHhCCEEec-----ccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCC---------------
Confidence 45688999999999999999 689999999999999987 45899999999865
Q ss_pred hhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhhC-ccccCchhHHHHHHHHHhHhccC
Q 010494 384 ITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELL 462 (509)
Q Consensus 384 ~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGGa~e~~ls~~L~~~~~~~ 462 (509)
..+||+|||+|+.+++|++|+++|||+++|+++++| +|||||++|++++.+|++++...
T Consensus 359 --------------------~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~ 418 (515)
T 3iyg_E 359 --------------------RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKC 418 (515)
T ss_pred --------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccC
Confidence 367999999999999999999999999999999999 99999999999999999998888
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 463 DNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 463 ~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
++.+| +|+++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 419 ~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~ 458 (515)
T 3iyg_E 419 PTLEQ-YAMRAFADALEVIPMALAENSGMNPIQTMTEVRAR 458 (515)
T ss_pred CcHHH-HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 88887 58999999999999999999999999999999874
No 18
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=2.9e-86 Score=718.84 Aligned_cols=412 Identities=23% Similarity=0.356 Sum_probs=371.2
Q ss_pred hhhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhhhccccccCcccchHhHHHHHHHHhh
Q 010494 32 KEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGART 111 (509)
Q Consensus 32 k~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~~~ 111 (509)
+...|| ++||..|+.||..|+++|+|||||+||||||+++.|+|+|||||+||+|+|+++||+ |+|++++|++|
T Consensus 38 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~q 111 (562)
T 3p9d_E 38 KKRQHG--LEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEI----AKLLVQLSKSQ 111 (562)
T ss_dssp CSCSHH--HHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHHH
T ss_pred ceecch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHH----HHHHHHHHHHH
Confidence 567789 899999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred hhhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccCc-------HHHHHHhhhhcCC-
Q 010494 112 NDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVED-------HELADVAAVSAGN- 183 (509)
Q Consensus 112 d~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~~-------~~l~~va~ts~~~- 183 (509)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++. +.|.++|+||+++
T Consensus 112 d~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK 191 (562)
T 3p9d_E 112 DDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSK 191 (562)
T ss_dssp HHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSS
T ss_pred HhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999999999999998864 3699999999986
Q ss_pred -----chhhhhHHHHHHHhhccC-------CcE--EEecCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceee
Q 010494 184 -----DYTVGKMISDALQQVGRN-------GVV--TIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKL 249 (509)
Q Consensus 184 -----~~~l~~li~~Ai~~v~~~-------g~I--~v~~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kI 249 (509)
.+.|+++++||+..+.+. +.| ...+|++++|| ++++|++|+++|.||||.++.+ .+..+++|+|
T Consensus 192 ~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m~~~~~-~~~~~~~~kI 269 (562)
T 3p9d_E 192 IVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQMPKCVL-PKEGSDGVKL 269 (562)
T ss_dssp TTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESSEEESSCCCTTSCCC------TTCSSCEE
T ss_pred hhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeeeEEEecCCCCCCcCcccc-cccccccceE
Confidence 368999999999998652 233 34589999999 9999999999999999755321 1112389999
Q ss_pred Eeeccc-------------CCCHHH-----------HHHHHHHHHhcCCCeEEEeccchHHHHHHHHHhcccccceeeee
Q 010494 250 LLVDKK-------------IKNPKD-----------MFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAI 305 (509)
Q Consensus 250 ll~d~~-------------i~~~~~-----------l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~i~aV 305 (509)
++++++ |+++++ +.++++++.+.|+||||++++|+++++++|+.|+ +.+|
T Consensus 270 all~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~------I~~v 343 (562)
T 3p9d_E 270 AILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQND------LPAV 343 (562)
T ss_dssp CEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTT------CCCE
T ss_pred EEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCC------CEEE
Confidence 998874 455666 5678999999999999999999999999999885 4566
Q ss_pred cCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEEE-----ecCeEEEEecCCChhHHHHHHHHHHH
Q 010494 306 KAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVI-----TKDSTLIVTDGSTRAAVEKRISEIRS 380 (509)
Q Consensus 306 ~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v-----~~~~~~~~~g~~~~~~i~~ri~~l~~ 380 (509)
+ ++++.+|+|||++|||++++ +++++++++||+|+.|++ ++++|++|+||+++
T Consensus 344 ~-----~v~k~~le~ia~~TGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~------------ 401 (562)
T 3p9d_E 344 R-----WVGGQELEHIAISTNGRIVP-----RFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKET------------ 401 (562)
T ss_dssp E-----CCCTTTHHHHHHHHCCCEEE-----SSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCC------------
T ss_pred e-----ccCHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCC------------
Confidence 6 44688999999999999999 689999999999999998 36899999999865
Q ss_pred HHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhhC-ccccCchhHHHHHHHHHhHh
Q 010494 381 LAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIK 459 (509)
Q Consensus 381 ~~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGGa~e~~ls~~L~~~~ 459 (509)
..+||+|||+|+.+++|++|+++|||+++|+++++| +|||||++|++++.+|++++
T Consensus 402 -----------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~ 458 (562)
T 3p9d_E 402 -----------------------KTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEA 458 (562)
T ss_dssp -----------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHH
T ss_pred -----------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHh
Confidence 367899999999999999999999999999999999 99999999999999999998
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 460 ELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 460 ~~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
.+.++.+| +++++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 459 ~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~ 501 (562)
T 3p9d_E 459 DKQRGIDQ-YAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSK 501 (562)
T ss_dssp HTTCTTHH-HHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHH
T ss_pred ccCccHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 88888887 48999999999999999999999999999999864
No 19
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.1e-85 Score=706.45 Aligned_cols=400 Identities=20% Similarity=0.300 Sum_probs=368.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhhhccccccCcccchHhHHHHHHHHhhhhhcCCCc
Q 010494 40 GSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGC 119 (509)
Q Consensus 40 ~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~~~d~~~GDGT 119 (509)
.++|..|+.||..|+++|||||||+||||||+++.|+++|||||+|||++|+++||+ |+|++++|++||+++||||
T Consensus 8 ~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGT 83 (515)
T 3iyg_G 8 RKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPA----AKSMIEISRTQDEEVGDGT 83 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccCc--H-HHHHHhhhhcCC------chhhhhH
Q 010494 120 TTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVED--H-ELADVAAVSAGN------DYTVGKM 190 (509)
Q Consensus 120 Tt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~~--~-~l~~va~ts~~~------~~~l~~l 190 (509)
||+|+||++||+++.+++++|+||+.|++||++|++.++++|++++++++. . .|.++|+||+++ .+.++++
T Consensus 84 TtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i 163 (515)
T 3iyg_G 84 TSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNI 163 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998874 3 899999999875 3577899
Q ss_pred HHHHHHhhccC--C--------cE--EEecCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEeecc----
Q 010494 191 ISDALQQVGRN--G--------VV--TIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDK---- 254 (509)
Q Consensus 191 i~~Ai~~v~~~--g--------~I--~v~~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~---- 254 (509)
++||+..+.++ + +| ...+|++++|+ ++++|++|+++|.||. |+++++||||+++|+
T Consensus 164 ~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~~Le~ 235 (515)
T 3iyg_G 164 ALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEY 235 (515)
T ss_pred HHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeEEEeCCCCCCC-------CcceeeeeEEEEEcccccc
Confidence 99999988632 2 13 34589999999 9999999999999984 678999999999998
Q ss_pred ---------cCCCHHHHHHHHH-----------HHHhcCCCeEEEeccchHHHHHHHHHhcccccceeeeecCcccccCc
Q 010494 255 ---------KIKNPKDMFKILD-----------SAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERK 314 (509)
Q Consensus 255 ---------~i~~~~~l~~~le-----------~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~ 314 (509)
.|++++++.++++ ++.+.|+++||++++|++.++++|..+ +|+|| ++++
T Consensus 236 ~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~------~I~av-----~~~~ 304 (515)
T 3iyg_G 236 KKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRA------NITAI-----RRVR 304 (515)
T ss_pred cccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHC------Cceee-----ccCC
Confidence 5778888888776 888999999999999999999998765 46776 4888
Q ss_pred cchHHHHHHHhCCeeeecccCccccCCCccccCc-ceEEEEe---cCeEEEEecCCChhHHHHHHHHHHHHHhhhhHHHH
Q 010494 315 SHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT-AIKVVIT---KDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQ 390 (509)
Q Consensus 315 ~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~-~~~i~v~---~~~~~~~~g~~~~~~i~~ri~~l~~~~~~~~~~~~ 390 (509)
+.+|+|||++|||++++ +++++++++||+ |+.|++. +++|+||+||+++
T Consensus 305 k~~leria~~tGa~ii~-----~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~---------------------- 357 (515)
T 3iyg_G 305 KTDNNRIARACGARIVS-----RPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDP---------------------- 357 (515)
T ss_pred HHHHHHHHHHhCCeeec-----cccccChhhcCCcccEEEEEEECCceEEEEeCCCCC----------------------
Confidence 99999999999999999 689999999999 9999864 5689999999866
Q ss_pred HHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhhC-ccccCchhHHHHHHHHHhHhccCCcHHHHH
Q 010494 391 KNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKI 469 (509)
Q Consensus 391 ~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~~q~~ 469 (509)
..|||+|||+|+.+++|++|+++|||+++|++++++ +|||||++|++++.+|++++...++.+|+
T Consensus 358 -------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~- 423 (515)
T 3iyg_G 358 -------------KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQW- 423 (515)
T ss_pred -------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHH-
Confidence 478999999999999999999999999999999775 99999999999999999998888888885
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 470 GAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 470 ~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
++++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 424 ~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~ 457 (515)
T 3iyg_G 424 PYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAK 457 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 8999999999999999999999999999999875
No 20
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.6e-85 Score=706.13 Aligned_cols=402 Identities=21% Similarity=0.315 Sum_probs=368.8
Q ss_pred cCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhhhccccccCcccchHhHHHHHHHHhhhhhc
Q 010494 36 FNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLA 115 (509)
Q Consensus 36 ~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~~~d~~~ 115 (509)
.| .++|..|+.||..|+++|++||||+||||||+++.|+|+|||||+||+|+|+++||+ |+|++++|++||+++
T Consensus 8 ~g--~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~~~ 81 (518)
T 3iyg_D 8 KP--AQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPA----ARMLVELSKAQDIEA 81 (518)
T ss_pred hh--HHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHH----HHHHHHHHHHhhhhh
Confidence 46 789999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred CCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccC--cH-HHHHHhhhhcCCc------hh
Q 010494 116 GDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE--DH-ELADVAAVSAGND------YT 186 (509)
Q Consensus 116 GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~-~l~~va~ts~~~~------~~ 186 (509)
||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. .|.++|+||++++ +.
T Consensus 82 GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~ 161 (518)
T 3iyg_D 82 GDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSL 161 (518)
T ss_pred CCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHHH
Confidence 999999999999999999999999999999999999999999999999999987 44 8999999999875 89
Q ss_pred hhhHHHHHHHhhcc---CCc-----EEEe--cCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEeecccC
Q 010494 187 VGKMISDALQQVGR---NGV-----VTIE--KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKI 256 (509)
Q Consensus 187 l~~li~~Ai~~v~~---~g~-----I~v~--~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i 256 (509)
|+++++||+.++++ +|. |+++ +|++..|+ ++++|++|+++|.| +||..++||||+++++++
T Consensus 162 i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~--------~mp~~i~n~kIlll~~~L 232 (518)
T 3iyg_D 162 LSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN--------SGITRVEKAKIGLIQFCL 232 (518)
T ss_pred HHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc--------CCCccccCceEEEEEeec
Confidence 99999999999985 454 5543 78899998 99999999999987 256678999999998864
Q ss_pred -------------CCHH-----------HHHHHHHHHHhcCCCeEEE-----eccchHHHHHHHHHhcccccceeeeecC
Q 010494 257 -------------KNPK-----------DMFKILDSAVKEKYPIVIV-----AEDIEQQALALLIRNKLRGVLKAAAIKA 307 (509)
Q Consensus 257 -------------~~~~-----------~l~~~le~i~~~~~~lvi~-----~~~i~~~al~~l~~n~~~~~~~i~aV~~ 307 (509)
++++ ++.++++++.+.|+||||+ +++|+++++++|..+ +|+||++
T Consensus 233 e~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~------~I~av~~ 306 (518)
T 3iyg_D 233 SAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKM------KIMVVKD 306 (518)
T ss_pred cccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHc------CcEEEec
Confidence 4454 3567889999999999999 899999999999887 5899997
Q ss_pred cccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEEEe---c-CeEEEEecCCChhHHHHHHHHHHHHHh
Q 010494 308 PAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---K-DSTLIVTDGSTRAAVEKRISEIRSLAE 383 (509)
Q Consensus 308 ~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v~---~-~~~~~~~g~~~~~~i~~ri~~l~~~~~ 383 (509)
|++ .+|+|||++|||++++ +++++++++||+|+.|++. + +++++|+||++
T Consensus 307 ~~~-----~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~---------------- 360 (518)
T 3iyg_D 307 IER-----EDIEFICKTIGTKPVA-----HVDQFTADMLGSAELAEEVSLNGSGKLIKITGCAS---------------- 360 (518)
T ss_pred CCH-----HHHHHHHHHhCCEEec-----ccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCC----------------
Confidence 764 5799999999999999 6899999999999999863 4 68899999864
Q ss_pred hhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhhC-ccccCchhHHHHHHHHHhHhccC
Q 010494 384 ITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELL 462 (509)
Q Consensus 384 ~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGGa~e~~ls~~L~~~~~~~ 462 (509)
++++|||+|||+|+.+++|++|+++|||+++|+++++| +|||||++|++++.+|++++.+.
T Consensus 361 ------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~ 422 (518)
T 3iyg_D 361 ------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTL 422 (518)
T ss_pred ------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcC
Confidence 24689999999999999999999999999999999999 99999999999999999998878
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 463 DNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 463 ~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
++.+|+ ++++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 423 ~g~~q~-~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~ 462 (518)
T 3iyg_D 423 SGMESY-CIRAFADAMEVIPSTLAENAGLNPISTVTELRNR 462 (518)
T ss_pred ChHHHH-HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 787774 8999999999999999999999999999999883
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1.3e-86 Score=718.05 Aligned_cols=406 Identities=23% Similarity=0.325 Sum_probs=372.2
Q ss_pred chhhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeec-CCCCcEeccchhhhhccccccCcccchHhHHHHHHHH
Q 010494 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQN-KYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGA 109 (509)
Q Consensus 31 ~k~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~-~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~ 109 (509)
.+...|| ++||..|+.||+.|+++|++||||+||||||++ +.|+|+|||||+||+|+|+++||. |+|++++|+
T Consensus 9 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~----Akll~e~a~ 82 (527)
T 3p9d_B 9 QVTEERA--ENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPA----AKVLVNISK 82 (527)
T ss_dssp CEEEEES--HHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHH----HHHHHHHHH
T ss_pred cchhhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHH----HHHHHHHHH
Confidence 4567789 899999999999999999999999999999999 899999999999999999999998 999999999
Q ss_pred hhhhhcCCCcchHHhHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHhcCcccCc-----H-HHHHHhhhhcC
Q 010494 110 RTNDLAGDGCTTSIILAQGLIAEGVKVIAA-GMNPVQIARGIEKTSKALLSELKLTSREVED-----H-ELADVAAVSAG 182 (509)
Q Consensus 110 ~~d~~~GDGTTt~viLa~~Ll~~~~~li~~-Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~~-----~-~l~~va~ts~~ 182 (509)
+||+++||||||+||||++||+++.+++.+ |+||+.|++||++|++.++++|+++++++++ . .|.++|+||++
T Consensus 83 ~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~ 162 (527)
T 3p9d_B 83 VQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLS 162 (527)
T ss_dssp HHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHT
T ss_pred HhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccc
Confidence 999999999999999999999999999999 9999999999999999999999999999874 4 89999999998
Q ss_pred C------chhhhhHHHHHHHhhccCC---cEEEe--cCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEe
Q 010494 183 N------DYTVGKMISDALQQVGRNG---VVTIE--KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLL 251 (509)
Q Consensus 183 ~------~~~l~~li~~Ai~~v~~~g---~I~v~--~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll 251 (509)
+ ++.|+++++||+.++++++ .|+++ .|+++.|+ ++++|++|+++|.||| +..++||+|++
T Consensus 163 sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~--------p~~~~n~kIll 233 (527)
T 3p9d_B 163 SKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ--------PKRIENAKILI 233 (527)
T ss_dssp TSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC--------CSCCSSCEEEE
T ss_pred cCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC--------CeeeecceEEE
Confidence 6 6899999999999999887 66654 69999998 9999999999999996 23578999999
Q ss_pred eccc--------------CCCHHHH-----------HHHHHHHHhcCCCeEEEeccchHHHHHHHHHhcccccceeeeec
Q 010494 252 VDKK--------------IKNPKDM-----------FKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIK 306 (509)
Q Consensus 252 ~d~~--------------i~~~~~l-----------~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~ 306 (509)
++++ |++++++ .++++++.+.|+||||++++|+++++++|..+ +|+||+
T Consensus 234 l~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~------~i~av~ 307 (527)
T 3p9d_B 234 ANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDL------GINSIE 307 (527)
T ss_dssp ECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHT------CBCCCC
T ss_pred eccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHC------CCEEEe
Confidence 8875 3455655 46788889999999999999999999999888 478998
Q ss_pred CcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEE---EecCeEEEEecCCChhHHHHHHHHHHHHHh
Q 010494 307 APAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVV---ITKDSTLIVTDGSTRAAVEKRISEIRSLAE 383 (509)
Q Consensus 307 ~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~---v~~~~~~~~~g~~~~~~i~~ri~~l~~~~~ 383 (509)
+|++ .+|+|||++|||++++ +++++++++||+|+.|+ ++++++++|.||+++
T Consensus 308 ~~~~-----~dle~ia~~tGa~iv~-----~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~--------------- 362 (527)
T 3p9d_B 308 HADF-----EGVERLALVTGGEVVS-----TFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAG--------------- 362 (527)
T ss_dssp CCHH-----HHHHHHHHHTCCCCCS-----TTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCS---------------
T ss_pred cCCH-----HHHHHHHHHhCCEEec-----chhhCCHHHCCCCcEEEEEEecceEEEEEECCCCC---------------
Confidence 6654 5799999999999999 68999999999999998 468999999998643
Q ss_pred hhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhhC-ccccCchhHHHHHHHHHhHhccC
Q 010494 384 ITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELL 462 (509)
Q Consensus 384 ~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGGa~e~~ls~~L~~~~~~~ 462 (509)
++|||+|||+|+.+++|++|+++||||++|+++++| +|||||++|++++.+|++++...
T Consensus 363 --------------------~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~ 422 (527)
T 3p9d_B 363 --------------------EACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNI 422 (527)
T ss_dssp --------------------CCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHH
T ss_pred --------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhcc
Confidence 689999999999999999999999999999999999 99999999999999999998777
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 463 DNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 463 ~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
++.+|+ |+++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 423 ~g~eq~-~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~ 462 (527)
T 3p9d_B 423 DGKKSL-AVEAFARALRQLPTILADNAGFDSSELVSKLRSS 462 (527)
T ss_dssp CSHHHH-HHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHH
T ss_pred CcHHHH-HHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHH
Confidence 787774 8999999999999999999999999999999875
No 22
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.8e-84 Score=699.12 Aligned_cols=399 Identities=19% Similarity=0.297 Sum_probs=363.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhhhccccccCcccchHhHHHHHHHHhhhhhcCCCc
Q 010494 40 GSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGC 119 (509)
Q Consensus 40 ~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~~~d~~~GDGT 119 (509)
++||..|+.||+.|+++|++||||+||||||+++.|+|+|||||+||+|+|+++||+ |+|++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (512)
T 3iyg_Q 10 EEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPA----AKMIVMASHMQEQEVGDGT 85 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 689999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhc----CcccCcH-HHHHHhhhhcCC-----chhhhh
Q 010494 120 TTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLT----SREVEDH-ELADVAAVSAGN-----DYTVGK 189 (509)
Q Consensus 120 Tt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~----s~~v~~~-~l~~va~ts~~~-----~~~l~~ 189 (509)
||+||||++||+++.+++++|+||+.|++||++|++.++++|+++ ++++++. .|.++|+||+++ ++.|++
T Consensus 86 TtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~ 165 (512)
T 3iyg_Q 86 NFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAK 165 (512)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHH
Confidence 999999999999999999999999999999999999999999998 5566666 899999999987 789999
Q ss_pred HHHHHHHhhccC-CcEE-------EecCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEeeccc------
Q 010494 190 MISDALQQVGRN-GVVT-------IEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK------ 255 (509)
Q Consensus 190 li~~Ai~~v~~~-g~I~-------v~~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~------ 255 (509)
+++||+.+++++ +.|. +.+|+++.|+ ++++|++|+++|.+ |++.++||+|++++++
T Consensus 166 livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~---------~~~~~~n~kI~ll~~~le~~~~ 235 (512)
T 3iyg_Q 166 LIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG---------DVTSVKDAKIAVYSCPFDGMIT 235 (512)
T ss_pred HHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC---------CCcccccCceEEEecccccccc
Confidence 999999999886 4332 3469999888 99999999999864 4557889999998875
Q ss_pred -------CCCHHHHHHH-------HH----HHHhcCCCeEEEeccchHHHHHHHHHhcccccceeeeecCcccccCccch
Q 010494 256 -------IKNPKDMFKI-------LD----SAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHY 317 (509)
Q Consensus 256 -------i~~~~~l~~~-------le----~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~ 317 (509)
|++++++.++ ++ ++.+.|+||||++++|++.++++|..+ +|+||++|++ .+
T Consensus 236 e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~------~I~av~~~~~-----~d 304 (512)
T 3iyg_Q 236 ETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKY------NIMLVRLNSK-----WD 304 (512)
T ss_pred cccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC------CeEEEEeCCH-----HH
Confidence 5677887776 54 888999999999999999998877543 6899997764 56
Q ss_pred HHHHHHHhCCeeeecccCccccCCCccccCcceEEEEe---cCeEEEEecCCChhHHHHHHHHHHHHHhhhhHHHHHHHH
Q 010494 318 LDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---KDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNIL 394 (509)
Q Consensus 318 L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v~---~~~~~~~~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l 394 (509)
|+|||++|||++++ +++++++++||+|+.|++. ++++++|++|+.
T Consensus 305 le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~--------------------------- 352 (512)
T 3iyg_Q 305 LRRLCKTVGATALP-----RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE--------------------------- 352 (512)
T ss_pred HHHHHHHhCCEEec-----ccccCCHHHCCcccEEEEEEeCCeEEEEEEcccC---------------------------
Confidence 99999999999999 6899999999999999874 668999998742
Q ss_pred HHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhhC-ccccCchhHHHHHHHHHhHhccCCcHHHHHHHHH
Q 010494 395 NERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEI 473 (509)
Q Consensus 395 ~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~~q~~~~~~ 473 (509)
++++|||+|||+|+.+++|++|+++||||++|+++++| +|||||++|++++.+|++++.+.++.+| +++++
T Consensus 353 -------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~ 424 (512)
T 3iyg_Q 353 -------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQ-YAIKK 424 (512)
T ss_pred -------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHH-HHHHH
Confidence 35799999999999999999999999999999999999 9999999999999999999887888887 58999
Q ss_pred HHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 474 FKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 474 ~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
|++||+.||++||+|||+|+.+++.+|++.
T Consensus 425 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~ 454 (512)
T 3iyg_Q 425 FAEAFEAIPRALAENSGVKANEVISKLYAV 454 (512)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 999999999999999999999999999874
No 23
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=2.7e-85 Score=712.07 Aligned_cols=416 Identities=21% Similarity=0.289 Sum_probs=376.6
Q ss_pred ceEEecCCCCCCCCCCCCCcccccchhhccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhh
Q 010494 7 PIFAISFKNPTLPKRAPNSVPRAMVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETV 86 (509)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tI 86 (509)
++.++++++++.+ |. ++||..|+.||..|+++|+|||||+||||||+++.|+++|||||+||
T Consensus 10 ~~~~l~~~~~~~~-----------------g~-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TI 71 (568)
T 3p9d_H 10 NAGLFKQGYNSYS-----------------NA-DGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATM 71 (568)
T ss_dssp CCSSCCSSCCBCC-----------------CH-HHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHH
T ss_pred hhhhhhcCccccc-----------------cH-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHH
Confidence 3677788887776 42 67999999999999999999999999999999999999999999999
Q ss_pred hccccccCcccchHhHHHHHHHHhhhhhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCc
Q 010494 87 LKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSR 166 (509)
Q Consensus 87 lk~i~~~~p~~~~ga~ll~~~a~~~d~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~ 166 (509)
||+|+++||+ |+|++++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++
T Consensus 72 lk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~ 147 (568)
T 3p9d_H 72 LRELDIVHPA----VKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVV 147 (568)
T ss_dssp TTTCCCCCHH----HHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHcccCCHH----HHHHHHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cc----CcH-HHHHHhhhhcCC-----chhhhhHHHHHHHhhccC-----C-------cEEE--ecCCCcccceEEeece
Q 010494 167 EV----EDH-ELADVAAVSAGN-----DYTVGKMISDALQQVGRN-----G-------VVTI--EKGKCTENSLEIVEGM 222 (509)
Q Consensus 167 ~v----~~~-~l~~va~ts~~~-----~~~l~~li~~Ai~~v~~~-----g-------~I~v--~~g~~~~ds~~li~Gi 222 (509)
++ ++. .|.++|+||+++ ++.|+++++||+.+++++ + .|++ .+|++++|| ++++|+
T Consensus 148 ~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~ 226 (568)
T 3p9d_H 148 GEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGM 226 (568)
T ss_dssp SCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSC
T ss_pred ccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccE
Confidence 76 344 899999999753 589999999999999874 3 4554 469999999 999999
Q ss_pred EEeccCCCCccccCcCCceeEee---ceeeEeeccc-------------CCCHHHHHH-----------HHHHHHhcCCC
Q 010494 223 RFDRGFLSPYFVTDRQKRTVEFH---DGKLLLVDKK-------------IKNPKDMFK-----------ILDSAVKEKYP 275 (509)
Q Consensus 223 ~~~~~~~~p~~~~~~~~~~~~~~---~~kIll~d~~-------------i~~~~~l~~-----------~le~i~~~~~~ 275 (509)
+|+++|. +|+++++ ||||+++|++ |++++++.+ +++++.+.|+|
T Consensus 227 v~dk~~~---------~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~ 297 (568)
T 3p9d_H 227 VFNREPE---------GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVE 297 (568)
T ss_dssp CBSSCBS---------SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEeeccc---------CCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 9999863 4677888 9999999987 677777765 67889999999
Q ss_pred eEEEeccchHHHHHHHHHhcccccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEEEe
Q 010494 276 IVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT 355 (509)
Q Consensus 276 lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v~ 355 (509)
|||++++|++.++++|..+ +|+||++|+ +.+|+|||++|||++++ +++++++++||+|+.|++.
T Consensus 298 vvi~~~~I~~~al~~L~~~------gI~av~~v~-----~~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~ 361 (568)
T 3p9d_H 298 CIVAGAGVGELALHYLNRY------GILVLKVPS-----KFELRRLCRVCGATPLP-----RLGAPTPEELGLVETVKTM 361 (568)
T ss_dssp EEEECSCCCHHHHHHHHHH------TCEEECCCC-----HHHHHHHHHHHSCCCCS-----SSSCCCGGGCEECSCCCCC
T ss_pred EEEECCCcChHHHHHHHHC------CeEEEecCC-----HHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEE
Confidence 9999999999999999887 479998664 67899999999999999 6899999999999999754
Q ss_pred ---cCeEEEEecCCChhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHH
Q 010494 356 ---KDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNAT 432 (509)
Q Consensus 356 ---~~~~~~~~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~ 432 (509)
+++|++|+||+. |++++|||+|||+|+.+++|.+|+++|||+++
T Consensus 362 ~ig~~~~~~~~g~~~---------------------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vv 408 (568)
T 3p9d_H 362 EIGGDRVTVFKQEQG---------------------------------EISRTSTIILRGATQNNLDDIERAIDDGVAAV 408 (568)
T ss_dssp EETTEECBCCCCCSS---------------------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred EecCceEEEEecCCC---------------------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHH
Confidence 589999999862 23578999999999999999999999999999
Q ss_pred HHHHh--hC-ccccCchhHHHHHHHHHhHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccc
Q 010494 433 KAAIE--EG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAHK 504 (509)
Q Consensus 433 ~~al~--~g-vvpGGGa~e~~ls~~L~~~~~~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~~ 504 (509)
|++++ ++ +|||||++|++++.+|++++.+.++.+|+ ++++|++||+.||++||+|||+|+.+++.+|++.+
T Consensus 409 r~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~-~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h 482 (568)
T 3p9d_H 409 KGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQL-AIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAH 482 (568)
T ss_dssp HHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHH-HHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCC
T ss_pred HHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 99999 65 99999999999999999998888888885 89999999999999999999999999999998864
No 24
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.9e-84 Score=694.41 Aligned_cols=402 Identities=22% Similarity=0.356 Sum_probs=360.9
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhhhccccccCcccchHhHHHHHHHHhhhhh
Q 010494 35 YFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDL 114 (509)
Q Consensus 35 ~~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~~~d~~ 114 (509)
..| .+|+..|+.||..|+++|+|||||+||||||+++.|+++|||||+||+|+|+++||+ |+|++++|++||++
T Consensus 6 ~~~--~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~----akll~~~a~~qd~e 79 (517)
T 3iyg_Z 6 ARA--QAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPT----ASLIAKVATAQDDI 79 (517)
T ss_pred hhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHHH
Confidence 346 799999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccC-cH-HHHHHhhhhcCC------chh
Q 010494 115 AGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE-DH-ELADVAAVSAGN------DYT 186 (509)
Q Consensus 115 ~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~-~~-~l~~va~ts~~~------~~~ 186 (509)
+||||||+|+||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +. .|.++|+||+++ .+.
T Consensus 80 ~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~ 159 (517)
T 3iyg_Z 80 TGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADV 159 (517)
T ss_pred hCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHHH
Confidence 9999999999999999999999999999999999999999999999999999887 55 899999999876 378
Q ss_pred hhhHHHHHHHhhccCC------c--EEEecCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEeecccC--
Q 010494 187 VGKMISDALQQVGRNG------V--VTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKI-- 256 (509)
Q Consensus 187 l~~li~~Ai~~v~~~g------~--I~v~~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i-- 256 (509)
|+++++||+..+.+.+ . |...+|++..|+ ++++|++|+++|.||+ |+++++||+|+++|+++
T Consensus 160 la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le~ 231 (517)
T 3iyg_Z 160 LTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLEY 231 (517)
T ss_pred HHHHHHHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEeccCCCCC-------ccccccCCeEEEecccccc
Confidence 9999999999886532 1 445689999999 9999999999999997 67889999999999875
Q ss_pred -----------CCHHHHHH-----------HHHHHHhcCC--------Ce-EEEeccchHHHHHHHHHhcccccceeeee
Q 010494 257 -----------KNPKDMFK-----------ILDSAVKEKY--------PI-VIVAEDIEQQALALLIRNKLRGVLKAAAI 305 (509)
Q Consensus 257 -----------~~~~~l~~-----------~le~i~~~~~--------~l-vi~~~~i~~~al~~l~~n~~~~~~~i~aV 305 (509)
++++++.+ .++++...+. |+ ||++++|+++++++|..+ +|++|
T Consensus 232 ~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~------gI~~v 305 (517)
T 3iyg_Z 232 EKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKE------GIIAL 305 (517)
T ss_pred cccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHC------CCEEE
Confidence 34555443 3445544443 44 555799999999999876 46777
Q ss_pred cCcccccCccchHHHHHHHhCCeeeecccCccccCCCccc-cCcceEE---EEecCeEEEEecCCChhHHHHHHHHHHHH
Q 010494 306 KAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEV-LGTAIKV---VITKDSTLIVTDGSTRAAVEKRISEIRSL 381 (509)
Q Consensus 306 ~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~-lG~~~~i---~v~~~~~~~~~g~~~~~~i~~ri~~l~~~ 381 (509)
+ ++++.+|+|||++|||++++ +++++++++ ||+|+ | .+++++|+||+||++++
T Consensus 306 ~-----~v~~~~leria~~tGa~iv~-----~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~------------ 362 (517)
T 3iyg_Z 306 R-----RAKRRNMERLTLACGGIALN-----SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPR------------ 362 (517)
T ss_pred E-----ecCHHHHHHHHHHhCCEEec-----chhhCcccccCCcce-EEEEEEcCceEEEEeCCCCch------------
Confidence 6 55688999999999999999 689999999 99999 9 46789999999998763
Q ss_pred HhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhhC-ccccCchhHHHHHHHHHhHhc
Q 010494 382 AEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKE 460 (509)
Q Consensus 382 ~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGGa~e~~ls~~L~~~~~ 460 (509)
.+||+|||+|+.+++|.+|+++||||++|+++++| +|||||++|++++.+|++++.
T Consensus 363 -----------------------~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~ 419 (517)
T 3iyg_Z 363 -----------------------SVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKP 419 (517)
T ss_pred -----------------------hheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhc
Confidence 46899999999999999999999999999999999 999999999999999999988
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 461 LLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 461 ~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
+.++.+| +++++|++||+.+|+|||+|||+|+.+++.+|++.
T Consensus 420 ~~~g~eq-~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~ 461 (517)
T 3iyg_Z 420 SVKGRAQ-LGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAE 461 (517)
T ss_pred cCCHHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 7777777 58999999999999999999999999999999875
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=3.6e-84 Score=701.33 Aligned_cols=402 Identities=21% Similarity=0.313 Sum_probs=357.6
Q ss_pred cCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEeccchhhhhccccccCcccchHhHHHHHHHHhhhhhc
Q 010494 36 FNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLA 115 (509)
Q Consensus 36 ~g~~~~a~~~~~~~~~~la~~v~stlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~~~d~~~ 115 (509)
.| .+|+..|+.||..|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |+|++++|++||+++
T Consensus 14 ~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~qd~e~ 87 (546)
T 3p9d_F 14 RR--DAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPT----AVLIARAAAAQDEIT 87 (546)
T ss_dssp EH--HHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHH----HHHHHHHHHHHHHHC
T ss_pred hH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHHHh
Confidence 36 899999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred CCCcchHHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCcccC----cH-HHHHHhhhhcCC------c
Q 010494 116 GDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE----DH-ELADVAAVSAGN------D 184 (509)
Q Consensus 116 GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~G~~~a~~~~l~~L~~~s~~v~----~~-~l~~va~ts~~~------~ 184 (509)
||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +. .|.++|+||+++ .
T Consensus 88 GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~ 167 (546)
T 3p9d_F 88 GDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDADLT 167 (546)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHC
T ss_pred CCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcchhHH
Confidence 999999999999999999999999999999999999999999999999999885 33 899999999986 4
Q ss_pred hhhhhHHHHHHHhhccC-------CcEE--EecCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEeeccc
Q 010494 185 YTVGKMISDALQQVGRN-------GVVT--IEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK 255 (509)
Q Consensus 185 ~~l~~li~~Ai~~v~~~-------g~I~--v~~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~ 255 (509)
+.|+++++||+..+.+. ..|+ ..+|++..|+ ++++|++|+++|.||. |+++++||+|+++|++
T Consensus 168 d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~en~kIll~~~~ 239 (546)
T 3p9d_F 168 EVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD-------MPTRVKNAYVLILNVS 239 (546)
T ss_dssp SSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEESCCCCSSS-------SCSSBCSCCCCEECCC
T ss_pred HHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEEeccccccc-------CcceecCceEEEecCc
Confidence 78999999999988631 1243 3589999999 9999999999999984 7788999999999986
Q ss_pred C-------------CCHHHHH-----------HHHHHHHh---------cCCC-eEEEeccchHHHHHHHHHhcccccce
Q 010494 256 I-------------KNPKDMF-----------KILDSAVK---------EKYP-IVIVAEDIEQQALALLIRNKLRGVLK 301 (509)
Q Consensus 256 i-------------~~~~~l~-----------~~le~i~~---------~~~~-lvi~~~~i~~~al~~l~~n~~~~~~~ 301 (509)
+ ++++++. ..++++.. .|+| +||++++|+++++++|..|+
T Consensus 240 Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~g------ 313 (546)
T 3p9d_F 240 LEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHN------ 313 (546)
T ss_dssp SSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTT------
T ss_pred ccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCC------
Confidence 4 3333332 23455544 3455 66667899999999998884
Q ss_pred eeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEE---EecCeEEEEecCCChhHHHHHHHHH
Q 010494 302 AAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVV---ITKDSTLIVTDGSTRAAVEKRISEI 378 (509)
Q Consensus 302 i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~---v~~~~~~~~~g~~~~~~i~~ri~~l 378 (509)
|++|+ ++++.+|+|||++|||++++ +++++++++||+|+.|+ +++++|+||+||+++
T Consensus 314 I~~vr-----~v~~~~leria~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~---------- 373 (546)
T 3p9d_F 314 ILALR-----RAKRRNMERLQLVTGGEAQN-----SVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDP---------- 373 (546)
T ss_dssp CEEEC-----CCCHHHHHHHHHTTTBCCCC-----CCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCC----------
T ss_pred CeeEe-----cCCHHHHHHHHHHhCCEEec-----chhhCCHhHCCcccEEEEEEecCceEEEEecCCCC----------
Confidence 57776 56788999999999999999 68999999999999994 678999999999876
Q ss_pred HHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHHHHHHHHHHHHHHHHHHhhC-ccccCchhHHHHHHHHHh
Q 010494 379 RSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEG 457 (509)
Q Consensus 379 ~~~~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E~~~~~~dAl~a~~~al~~g-vvpGGGa~e~~ls~~L~~ 457 (509)
..|||+|||+|+.+++|++|+++||||++|+++++| +|||||++|++++.+|++
T Consensus 374 -------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~ 428 (546)
T 3p9d_F 374 -------------------------KSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRS 428 (546)
T ss_dssp -------------------------SCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHH
T ss_pred -------------------------ceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHh
Confidence 368999999999999999999999999999999999 999999999999999998
Q ss_pred ---HhccCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc
Q 010494 458 ---IKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVSAH 503 (509)
Q Consensus 458 ---~~~~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~l~~~ 503 (509)
++...++.+|+ ++++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 429 ~~~~~~~~~g~eq~-~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~ 476 (546)
T 3p9d_F 429 ANMNKLGAKGKTKT-GIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDE 476 (546)
T ss_dssp HHTTTTTTTSHHHH-HHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHH
T ss_pred hhhhhhcCchHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 47777787774 8999999999999999999999999999999864
No 26
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=7.4e-78 Score=645.57 Aligned_cols=371 Identities=23% Similarity=0.357 Sum_probs=298.8
Q ss_pred EeecCCCCcEeccchhhhhccccccCcccchHhHHHHHHHHhhhhhcCCCcchHHhHHHHHHHHHHHHHhcCCChHHHHH
Q 010494 69 VLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIAR 148 (509)
Q Consensus 69 ~I~~~~g~~~iTnDG~tIlk~i~~~~p~~~~ga~ll~~~a~~~d~~~GDGTTt~viLa~~Ll~~~~~li~~Gi~p~~I~~ 148 (509)
||+++.|+++|||||+||+|+|+++||+ |+|++++|++||+++||||||+|+||++||+++.+++++|+||+.|++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPA----AKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHH----HHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 6888899999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCcccCc--H-HHHHHhhhhcC------CchhhhhHHHHHHHhhccC--Cc--------EEEe--
Q 010494 149 GIEKTSKALLSELKLTSREVED--H-ELADVAAVSAG------NDYTVGKMISDALQQVGRN--GV--------VTIE-- 207 (509)
Q Consensus 149 G~~~a~~~~l~~L~~~s~~v~~--~-~l~~va~ts~~------~~~~l~~li~~Ai~~v~~~--g~--------I~v~-- 207 (509)
||++|++.++++|++++++++. . .|.++|+||++ +++.|+++++||+.+++++ |. |+++
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 9999999999999999999874 4 89999998855 4789999999999999876 42 4554
Q ss_pred cCCCcccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEeeccc-------------CCCHHHH-----------H
Q 010494 208 KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK-------------IKNPKDM-----------F 263 (509)
Q Consensus 208 ~g~~~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~-------------i~~~~~l-----------~ 263 (509)
+|++++|+ ++++|++|+++|.||+| +++++||||+++|++ |++++++ .
T Consensus 157 ~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~ 228 (500)
T 3aq1_B 157 AGGSIDDS-ELIDGLVIDKERSHPNM-------PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMR 228 (500)
T ss_dssp ESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEEEESSCBCC-------------------------CHHH
T ss_pred cCCCccce-EEEeeeEEeecCCCCCC-------cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHH
Confidence 89999988 99999999999999974 668999999999998 6777775 7
Q ss_pred HHHHHHHhcCCCeEEEeccchHHHHHHHHHhcccccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCc
Q 010494 264 KILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGK 343 (509)
Q Consensus 264 ~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~ 343 (509)
++++++.+.|+||||++++|+++++++|..++ |+||+ ++++.+|+|||++|||++++ +++++++
T Consensus 229 ~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis-----~l~~~~~ 292 (500)
T 3aq1_B 229 EMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAVR-----RVKKSDLKRLSKVTGATIIQ-----DLDQITT 292 (500)
T ss_dssp HHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBS-----CTTCCCS
T ss_pred HHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEEE-----eCCHHHHHHHHHHhCCeEec-----ccccCCH
Confidence 88999999999999999999999999999884 68875 88899999999999999999 6899999
Q ss_pred cccCcceEEEEe---cCeEEEEecCCChhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEEEeccCChhhHHH
Q 010494 344 EVLGTAIKVVIT---KDSTLIVTDGSTRAAVEKRISEIRSLAEITEERFQKNILNERIARLSGGIAILQVGAQTVVELKD 420 (509)
Q Consensus 344 ~~lG~~~~i~v~---~~~~~~~~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~r~~~l~~~~~tI~v~G~t~~~l~E 420 (509)
++||+|+.|++. +++|++|+||+++ ++|||+|||+|+.+++|
T Consensus 293 ~~LG~a~~v~~~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~t~~~l~E 337 (500)
T 3aq1_B 293 EDVGTAGLVEEKEVRGGKMTYVTGCQNS-----------------------------------KAVTVLLHGGTEHVVDS 337 (500)
T ss_dssp TTCEEEEEEEEEECSSSEEEEEEEETTC-----------------------------------CCEEEEEEESSHHHHHH
T ss_pred hHCCCceEEEEEEecCeEEEEEECCCCC-----------------------------------ceEEEEecCCcHHHHHH
Confidence 999999999975 8999999998754 58999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhC-ccccCchhHHHHHHHHHhHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHH
Q 010494 421 KQLRIEDALNATKAAIEEG-IVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQ 499 (509)
Q Consensus 421 ~~~~~~dAl~a~~~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~~q~~~~~~~~~AL~~~~~~L~~NaG~d~~~ii~~ 499 (509)
++|+++|||+++|+++++| +|||||++|++++.+|++++.+.++.+| +++++|++||+.||++||+|||+|+.+++.+
T Consensus 338 ~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~ 416 (500)
T 3aq1_B 338 LDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQ-LAVSKFAEALEVIPVALAENAGLDPIDIMVE 416 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHH-HHHHHHHHHTTHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 9999999999999999999 9999999999999999999887878777 5899999999999999999999999999999
Q ss_pred Hhcc
Q 010494 500 VSAH 503 (509)
Q Consensus 500 l~~~ 503 (509)
|++.
T Consensus 417 l~~~ 420 (500)
T 3aq1_B 417 LRSQ 420 (500)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9864
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.7e-47 Score=349.79 Aligned_cols=193 Identities=41% Similarity=0.739 Sum_probs=189.6
Q ss_pred eEEeeceEEeccCCCCccccCcCCceeEeeceeeEeecccCCCHHHHHHHHHHHHhcCCCeEEEeccchHHHHHHHHHhc
Q 010494 216 LEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDSAVKEKYPIVIVAEDIEQQALALLIRNK 295 (509)
Q Consensus 216 ~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~ 295 (509)
+++++||.||+||+||||++++++|..+++||+||++|.+|+++++++|+||.+.+.+.||+|+++||+++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEEEecCeEEEEecCCChhHHHHHH
Q 010494 296 LRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVITKDSTLIVTDGSTRAAVEKRI 375 (509)
Q Consensus 296 ~~~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v~~~~~~~~~g~~~~~~i~~ri 375 (509)
++|.++|+|||+|+||+.|+..|+|||.+|||+++++++|+++++++.++||+|+++.+++|+|++++|.++++.|++|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHhhhcCCeEEE
Q 010494 376 SEIRSLAEITEERFQKNILNERIARLSGGIAIL 408 (509)
Q Consensus 376 ~~l~~~~~~~~~~~~~~~l~~r~~~l~~~~~tI 408 (509)
++|+.+++.++|+|+||+|+||+++|+|++|+|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999999864
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=3.7e-46 Score=341.62 Aligned_cols=190 Identities=44% Similarity=0.765 Sum_probs=185.8
Q ss_pred EeeceEEeccCCCCccccCcCCceeEeeceeeEeecccCCCHHHHHHHHHHHHhcCCCeEEEeccchHHHHHHHHHhccc
Q 010494 218 IVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLR 297 (509)
Q Consensus 218 li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~~~ 297 (509)
=.+|+.||+||+||||++++++|..+++||+||++|.+|+++++++|+||.+.+.+.||||+++||+++||++|+.|+++
T Consensus 11 ~~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklr 90 (201)
T 3osx_A 11 GSEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMR 90 (201)
T ss_dssp -CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHH
T ss_pred CccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhcc
Confidence 34799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEEEecCeEEEEecCCChhHHHHHHHH
Q 010494 298 GVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVITKDSTLIVTDGSTRAAVEKRISE 377 (509)
Q Consensus 298 ~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v~~~~~~~~~g~~~~~~i~~ri~~ 377 (509)
|.++|+|||+|+||+.|+..|+|||.+|||+++++++|+++++++.++||+|++|.+++|+|++++|.++++.|++|+++
T Consensus 91 g~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~q 170 (201)
T 3osx_A 91 GIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQ 170 (201)
T ss_dssp TSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhhhcCCeEE
Q 010494 378 IRSLAEITEERFQKNILNERIARLSGGIAI 407 (509)
Q Consensus 378 l~~~~~~~~~~~~~~~l~~r~~~l~~~~~t 407 (509)
|+.+++.++|+|+||+|+||+++|+|++|+
T Consensus 171 Ir~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 171 IRQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 999999999999999999999999999873
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=1.8e-35 Score=258.46 Aligned_cols=144 Identities=46% Similarity=0.788 Sum_probs=142.0
Q ss_pred ceEEeccCCCCccccCcCCceeEeeceeeEeecccCCCHHHHHHHHHHHHhcCCCeEEEeccchHHHHHHHHHhcccccc
Q 010494 221 GMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVL 300 (509)
Q Consensus 221 Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~ 300 (509)
|+.||+||+||||++++++|..+++||+||++|++|+++++++|+||++.+.|.||+|+++||+.+||++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEEEecCeEEEEec
Q 010494 301 KAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVITKDSTLIVTD 364 (509)
Q Consensus 301 ~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v~~~~~~~~~g 364 (509)
+|+|||+|+||+.|+..|+|||.+|||+++++++|+++++++.++||+|+++.+++++|++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999986
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.89 E-value=9.7e-23 Score=189.34 Aligned_cols=133 Identities=19% Similarity=0.313 Sum_probs=111.9
Q ss_pred cccceEEeeceEEeccCCCCccccCcCCceeEeeceeeEeecccC-------------CCHHHH-----------HHHHH
Q 010494 212 TENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKI-------------KNPKDM-----------FKILD 267 (509)
Q Consensus 212 ~~ds~~li~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i-------------~~~~~l-----------~~~le 267 (509)
++|| ++++|++|++++.+| +||+.++||||+++++++ ++++++ ..+++
T Consensus 1 ~~dS-~lv~Gvvl~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~ 72 (178)
T 1gml_A 1 MEDS-CVLRGVMINKDVTHP-------RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCE 72 (178)
T ss_dssp --CC-SEEEEEEESCCCSST-------TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEEEeccccCC-------CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 3678 899999999998876 478899999999999864 333333 34578
Q ss_pred HHHhcCCCeEEEeccchHHHHHHHHHhcccccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccC
Q 010494 268 SAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLG 347 (509)
Q Consensus 268 ~i~~~~~~lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG 347 (509)
++.+.|+|+|+++++|++.|+++|..+ +|+||+ ++++.+|+|||++|||++++ ++++++++.||
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~k~------gI~~vr-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG 136 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLMRA------NVTAIR-----RVRKTDNNRIARACGARIVS-----RPEELREDDVG 136 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHHHT------TCEEEC-----CCCHHHHHHHHHHHCCCEES-----CGGGCCGGGSB
T ss_pred HHhhcCCcEEEECCcccHHHHHHHHHC------CCEEEe-----cCCHHHHHHHHHHhCCeEeC-----ChhhCChhhhC
Confidence 899999999999999999999999877 468776 77899999999999999999 68999999999
Q ss_pred c-ceEEEE---ecCeEEEEecCCCh
Q 010494 348 T-AIKVVI---TKDSTLIVTDGSTR 368 (509)
Q Consensus 348 ~-~~~i~v---~~~~~~~~~g~~~~ 368 (509)
+ |+.+++ +++++++|+||+++
T Consensus 137 ~~~~~v~~~~ig~~~~~~~~gc~~~ 161 (178)
T 1gml_A 137 TGAGLLEIKKIGDEYFTFITDCKDP 161 (178)
T ss_dssp CCEEEEEEEEETTEEEEEEEEESST
T ss_pred CcccEEEEEEECCeEEEEEECCCCC
Confidence 9 999984 57899999999765
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.80 E-value=2.4e-19 Score=163.30 Aligned_cols=127 Identities=20% Similarity=0.319 Sum_probs=109.1
Q ss_pred eeceEEeccCCCCccccCcCCceeEeeceeeEeecccC-------------CCHHHH-----------HHHHHHHHhcCC
Q 010494 219 VEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKI-------------KNPKDM-----------FKILDSAVKEKY 274 (509)
Q Consensus 219 i~Gi~~~~~~~~p~~~~~~~~~~~~~~~~kIll~d~~i-------------~~~~~l-----------~~~le~i~~~~~ 274 (509)
++|++|++++.+| +||+.++||||+++++++ ++++++ ...++++.+.|+
T Consensus 1 i~Gvv~~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHS-------KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCT-------TSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCC-------CCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 5799999998886 478899999999999864 445444 345778999999
Q ss_pred CeEEEeccchHHHHHHHHHhcccccceeeeecCcccccCccchHHHHHHHhCCeeeecccCccccCCCccccCcceEEEE
Q 010494 275 PIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVI 354 (509)
Q Consensus 275 ~lvi~~~~i~~~al~~l~~n~~~~~~~i~aV~~~~~~~~~~~~L~~ia~~tG~~ii~~~~~~~~~~~~~~~lG~~~~i~v 354 (509)
|+||++++|++.|+++|..+ +|+||+ ++++.+|+|||++|||++++ ++++++++.||+|+.|++
T Consensus 74 nVVl~~k~I~d~a~~~l~k~------gI~~v~-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKE------GIYAVR-----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHT------TCEEEC-----SCCHHHHHHHHHHHTCCCBS-----STTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHC------CCEEEc-----cCCHHHHHHHHHHhCCeeeC-----ccccCCcccCccceEEEE
Confidence 99999999999999999877 468876 77899999999999999999 689999999999999985
Q ss_pred ---ecCeEEEEecCCCh
Q 010494 355 ---TKDSTLIVTDGSTR 368 (509)
Q Consensus 355 ---~~~~~~~~~g~~~~ 368 (509)
+++++++|+||++.
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 57899999999764
No 32
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=25.15 E-value=1.4e+02 Score=25.34 Aligned_cols=47 Identities=15% Similarity=0.151 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhc-cCCCCCceEeecC--CCC----------cEeccchhhh
Q 010494 40 GSATKKLQAGVDLVAELVGVT-LGPKGRNVVLQNK--YGP----------PKIVNDGETV 86 (509)
Q Consensus 40 ~~a~~~~~~~~~~la~~v~st-lGP~G~~k~I~~~--~g~----------~~iTnDG~tI 86 (509)
++.+..+...++.+++.++.. |+|.|.+.++-+. .|. |+.++||...
T Consensus 58 ~~~~~~l~~~~~~v~~~l~~~~~~~~~~ni~~n~g~~aGq~v~HlHiHiiPR~~~d~~~~ 117 (149)
T 3o0m_A 58 PETVAGMAAVGQRIARAARESGLHADGNNIAINDGKAAFQTVFHIHLHVVPRRNGDKLSF 117 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCCSEEEEECCCSGGGTCCSSSCCEEEEEECTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCCCCCccceEEEEEECCccCCCccc
Confidence 678899999999999999998 9999998766432 122 5666776543
Done!